locus-tag	class	description
D0784_RS00010	COG0592	DNA-directed DNA polymerase activity
D0784_RS00020	COG0187	DNA topoisomerase II activity
D0784_RS00025	COG0071	Belongs to the small heat shock protein (HSP20) family
D0784_RS00030	COG3977	Valine--pyruvate aminotransferase
D0784_RS00045	COG2119	membrane
D0784_RS00055	COG0425	Belongs to the sulfur carrier protein TusA family
D0784_RS00070	COG0604	alcohol dehydrogenase
D0784_RS00075	COG0183	Belongs to the thiolase family
D0784_RS00085	COG1739	Uncharacterized protein family UPF0029
D0784_RS00090	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
D0784_RS00140	COG0583	DNA-binding transcription factor activity
D0784_RS00145	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
D0784_RS00150	COG2960	long-chain fatty acid transporting porin activity
D0784_RS00160	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D0784_RS00165	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D0784_RS00170	COG1309	transcriptional regulator
D0784_RS00220	COG4172	Belongs to the ABC transporter superfamily
D0784_RS00225	COG4166	transmembrane transport
D0784_RS00230	COG0601	transmembrane transport
D0784_RS00235	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
D0784_RS00270	COG1609	Transcriptional regulator
D0784_RS00275	COG0583	DNA-binding transcription factor activity
D0784_RS00280	COG2076	Multidrug Resistance protein
D0784_RS00295	COG0129	dihydroxy-acid dehydratase activity
D0784_RS00300	COG3265	gluconokinase activity
D0784_RS00305	COG2610	gluconate transmembrane transporter activity
D0784_RS00310	COG0800	Aldolase
D0784_RS00315	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
D0784_RS00325	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
D0784_RS00340	COG1522	sequence-specific DNA binding
D0784_RS00345	COG5002	protein histidine kinase activity
D0784_RS00345	COG5001	Diguanylate cyclase
D0784_RS00360	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
D0784_RS00380	COG0589	response to stress
D0784_RS00385	COG1528	Iron-storage protein
D0784_RS00395	COG2081	HI0933 family
D0784_RS00420	COG1910	domain protein
D0784_RS00435	COG1322	Protein conserved in bacteria
D0784_RS00445	COG3165	ubiquinone biosynthetic process from chorismate
D0784_RS00460	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
D0784_RS00465	COG0805	protein transport
D0784_RS00470	COG0084	hydrolase, TatD family'
D0784_RS00490	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
D0784_RS00490	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
D0784_RS00500	COG0218	Necessary for normal cell division and for the maintenance of normal septation
D0784_RS00545	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
D0784_RS00550	COG3300	MHYT domain
D0784_RS00550	COG5001	Diguanylate cyclase
D0784_RS00555	COG2204	response regulator
D0784_RS00560	COG3852	Histidine kinase
D0784_RS00570	COG0174	glutamine synthetase
D0784_RS00580	COG1217	gtp-binding protein TYPA
D0784_RS00600	COG1490	D-aminoacyl-tRNA deacylase activity
D0784_RS00605	COG0456	acetyltransferase
D0784_RS00625	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
D0784_RS00630	COG3031	protein transport across the cell outer membrane
D0784_RS00640	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
D0784_RS00645	COG1459	type II secretion system
D0784_RS00650	COG2165	general secretion pathway protein
D0784_RS00655	COG2165	general secretion pathway protein
D0784_RS00660	COG2165	general secretion pathway protein
D0784_RS00665	COG4795	General secretion pathway protein
D0784_RS00670	COG3156	type II secretion system protein K
D0784_RS00675	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
D0784_RS00680	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
D0784_RS00690	COG1218	3'(2'),5'-bisphosphate nucleotidase
D0784_RS00695	COG0494	nUDIX hydrolase
D0784_RS00705	COG1040	competence protein
D0784_RS00720	COG2183	response to ionizing radiation
D0784_RS00755	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
D0784_RS00805	COG0784	Response regulator, receiver
D0784_RS00805	COG2205	protein histidine kinase activity
D0784_RS00815	COG0464	growth
D0784_RS00855	COG2233	PERMEase
D0784_RS00865	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
D0784_RS00870	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
D0784_RS00875	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
D0784_RS00880	COG1758	RNA polymerase activity
D0784_RS00885	COG0194	GDP metabolic process
D0784_RS00900	COG0848	biopolymer transport protein
D0784_RS00905	COG0811	peptide transport
D0784_RS00920	COG4206	TonB-dependent receptor
D0784_RS00925	COG4174	ABC transporter (Permease)
D0784_RS00930	COG4239	(ABC) transporter, permease
D0784_RS00935	COG0747	negative chemotaxis
D0784_RS00940	COG0444	Belongs to the ABC transporter superfamily
D0784_RS00945	COG4608	Belongs to the ABC transporter superfamily
D0784_RS00965	COG1561	YicC-like family, N-terminal region
D0784_RS00970	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
D0784_RS00975	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
D0784_RS00980	COG1560	Kdo2-lipid A biosynthetic process
D0784_RS00990	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
D0784_RS01050	COG0859	PFAM glycosyl transferase family 9
D0784_RS01060	COG2089	acid synthase
D0784_RS01070	COG0438	transferase activity, transferring glycosyl groups
D0784_RS01075	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
D0784_RS01095	COG1519	Transferase
D0784_RS01100	COG0859	PFAM glycosyl transferase family 9
D0784_RS01105	COG1560	Kdo2-lipid A biosynthetic process
D0784_RS01115	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
D0784_RS01155	COG2089	acid synthase
D0784_RS01195	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
D0784_RS01215	COG0149	triose-phosphate isomerase activity
D0784_RS01245	COG1494	fructose-1,6-bisphosphatase
D0784_RS01260	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
D0784_RS01265	COG1575	Belongs to the MenA family. Type 1 subfamily
D0784_RS01285	COG1609	Transcriptional regulator
D0784_RS01290	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
D0784_RS01310	COG0088	Forms part of the polypeptide exit tunnel
D0784_RS01395	COG1841	ribosomal large subunit assembly
D0784_RS01405	COG0201	protein transport
D0784_RS01410	COG0257	Belongs to the bacterial ribosomal protein bL36 family
D0784_RS01415	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
D0784_RS01420	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
D0784_RS01430	COG0202	RNA polymerase activity
D0784_RS01435	COG0203	ribosomal protein L17
D0784_RS01445	COG0545	Peptidyl-prolyl cis-trans isomerase
D0784_RS01460	COG2153	protein acetylation
D0784_RS01465	COG0513	Belongs to the DEAD box helicase family
D0784_RS01475	COG0737	Belongs to the 5'-nucleotidase family
D0784_RS01480	COG1648	precorrin-2 dehydrogenase activity
D0784_RS01480	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
D0784_RS01495	COG3273	potassium ion transport
D0784_RS01495	COG0471	metal ion transport
D0784_RS01500	COG0529	Catalyzes the synthesis of activated sulfate
D0784_RS01520	COG1136	(ABC) transporter
D0784_RS01535	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
D0784_RS01545	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
D0784_RS01550	COG0729	surface antigen
D0784_RS01560	COG2105	PFAM AIG2 family protein
D0784_RS01575	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
D0784_RS01585	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
D0784_RS01590	COG0163	prenyltransferase activity
D0784_RS01595	COG4143	(ABC) transporter
D0784_RS01600	COG1178	ABC-type Fe3 transport system permease component
D0784_RS01605	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
D0784_RS01620	COG2358	TRAP transporter, solute receptor (TAXI family
D0784_RS01640	COG0142	geranyltranstransferase activity
D0784_RS01645	COG0261	This protein binds to 23S rRNA in the presence of protein L20
D0784_RS01660	COG2966	Psort location CytoplasmicMembrane, score
D0784_RS01665	COG3610	response to peptide
D0784_RS01690	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
D0784_RS01695	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D0784_RS01700	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
D0784_RS01705	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
D0784_RS01725	COG0473	3-isopropylmalate dehydrogenase activity
D0784_RS01730	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
D0784_RS01760	COG0583	DNA-binding transcription factor activity
D0784_RS01765	COG1022	Amp-dependent synthetase and ligase
D0784_RS01770	COG0028	Belongs to the TPP enzyme family
D0784_RS01775	COG0440	acetolactate synthase activity
D0784_RS01780	COG3706	GGDEF domain
D0784_RS01790	COG0469	pyruvate kinase activity
D0784_RS01795	COG1349	DNA-binding transcription factor activity
D0784_RS01800	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
D0784_RS01820	COG5002	protein histidine kinase activity
D0784_RS01825	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
D0784_RS01830	COG3722	fumarate hydratase activity
D0784_RS01840	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
D0784_RS01840	COG2213	PTS system mannitol-specific
D0784_RS01880	COG0358	DNA primase activity
D0784_RS01885	COG1610	YqeY-like protein
D0784_RS01890	COG0828	Belongs to the bacterial ribosomal protein bS21 family
D0784_RS01895	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
D0784_RS01900	COG0596	Alpha beta hydrolase
D0784_RS01910	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
D0784_RS01915	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
D0784_RS01930	COG3409	Peptidoglycan-binding domain 1 protein
D0784_RS01930	COG3267	Type II secretory pathway component ExeA
D0784_RS01940	COG0405	Gamma-glutamyltransferase
D0784_RS01945	COG4991	sh3 domain protein
D0784_RS01950	COG0306	phosphate transporter
D0784_RS01955	COG1392	Phosphate transport regulator
D0784_RS01960	COG3025	triphosphatase activity
D0784_RS01965	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
D0784_RS01975	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
D0784_RS01985	COG1538	Outer membrane efflux protein
D0784_RS01990	COG0494	nUDIX hydrolase
D0784_RS01995	COG3151	Protein conserved in bacteria
D0784_RS02005	COG3150	esterase
D0784_RS02015	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
D0784_RS02020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
D0784_RS02025	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
D0784_RS02030	COG3105	Protein conserved in bacteria
D0784_RS02040	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
D0784_RS02060	COG0723	plastoquinol--plastocyanin reductase activity
D0784_RS02065	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
D0784_RS02070	COG2857	Cytochrome c1
D0784_RS02075	COG0625	glutathione transferase activity
D0784_RS02080	COG2969	positive regulation of protein catabolic process
D0784_RS02085	COG2823	Periplasmic or secreted lipoprotein
D0784_RS02090	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
D0784_RS02105	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
D0784_RS02125	COG3116	cell division
D0784_RS02130	COG0768	penicillin binding
D0784_RS02135	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
D0784_RS02140	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
D0784_RS02155	COG0772	Belongs to the SEDS family
D0784_RS02170	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
D0784_RS02175	COG0849	cell division
D0784_RS02180	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
D0784_RS02200	COG0494	nUDIX hydrolase
D0784_RS02210	COG0505	Belongs to the CarA family
D0784_RS02215	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
D0784_RS02240	COG0730	response to heat
D0784_RS02245	COG0583	DNA-binding transcription factor activity
D0784_RS02250	COG2860	membrane
D0784_RS02275	COG0493	'glutamate synthase
D0784_RS02280	COG0070	glutamate synthase
D0784_RS02280	COG0069	glutamate synthase activity
D0784_RS02280	COG0067	glutamate synthase
D0784_RS02290	COG0069	glutamate synthase activity
D0784_RS02290	COG0067	glutamate synthase
D0784_RS02290	COG0070	glutamate synthase
D0784_RS02295	COG1242	4 iron, 4 sulfur cluster binding
D0784_RS02300	COG4251	negative regulation of phosphorylation
D0784_RS02300	COG3706	GGDEF domain
D0784_RS02300	COG2203	Gaf domain
D0784_RS02300	COG5001	Diguanylate cyclase
D0784_RS02310	COG2198	Histidine kinase
D0784_RS02310	COG0784	Response regulator, receiver
D0784_RS02310	COG5002	protein histidine kinase activity
D0784_RS02320	COG0745	RESPONSE REGULATOR receiver
D0784_RS02335	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
D0784_RS02350	COG0083	homoserine kinase activity
D0784_RS02355	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
D0784_RS02390	COG1115	amino acid carrier protein
D0784_RS02395	COG3022	response to hydroperoxide
D0784_RS02405	COG0513	Belongs to the DEAD box helicase family
D0784_RS02420	COG0716	FMN binding
D0784_RS02425	COG4974	Belongs to the 'phage' integrase family
D0784_RS02430	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
D0784_RS02435	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
D0784_RS02460	COG0667	Aldo Keto reductase
D0784_RS02485	COG0730	response to heat
D0784_RS02500	COG1283	sodium-dependent phosphate transmembrane transporter activity
D0784_RS02505	COG0583	DNA-binding transcription factor activity
D0784_RS02510	COG0640	Transcriptional regulator
D0784_RS02515	COG0268	Binds directly to 16S ribosomal RNA
D0784_RS02520	COG0728	peptidoglycan biosynthetic process
D0784_RS02525	COG0196	riboflavin kinase activity
D0784_RS02540	COG1047	Peptidyl-prolyl cis-trans
D0784_RS02545	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
D0784_RS02550	COG3279	Response regulator of the LytR AlgR family
D0784_RS02555	COG3275	phosphorelay sensor kinase activity
D0784_RS02560	COG1966	Carbon starvation protein
D0784_RS02580	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
D0784_RS02590	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
D0784_RS02595	COG0287	Prephenate dehydrogenase
D0784_RS02595	COG1605	Chorismate mutase
D0784_RS02600	COG0739	heme binding
D0784_RS02610	COG0488	(ABC) transporter
D0784_RS02625	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
D0784_RS02630	COG0077	Prephenate dehydratase
D0784_RS02630	COG1605	Chorismate mutase
D0784_RS02635	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
D0784_RS02640	COG0741	lytic transglycosylase activity
D0784_RS02645	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
D0784_RS02650	COG0564	pseudouridine synthase activity
D0784_RS02655	COG1496	oxidoreductase activity
D0784_RS02660	COG0542	response to heat
D0784_RS02720	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
D0784_RS02725	COG0826	peptidase U32
D0784_RS02735	COG0745	RESPONSE REGULATOR receiver
D0784_RS02740	COG5002	protein histidine kinase activity
D0784_RS02750	COG0248	Ppx GppA phosphatase
D0784_RS02755	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
D0784_RS02760	COG0573	inorganic phosphate transmembrane transporter activity
D0784_RS02765	COG0581	inorganic phosphate transmembrane transporter activity
D0784_RS02770	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
D0784_RS02775	COG0704	Plays a role in the regulation of phosphate uptake
D0784_RS02805	COG0450	alkyl hydroperoxide reductase
D0784_RS02810	COG0583	DNA-binding transcription factor activity
D0784_RS02815	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
D0784_RS02825	COG0517	IMP dehydrogenase activity
D0784_RS02850	COG1862	Preprotein translocase
D0784_RS02855	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
D0784_RS02860	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
D0784_RS02870	COG0483	inositol monophosphate 1-phosphatase activity
D0784_RS02875	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
D0784_RS02890	COG0822	iron-sulfur transferase activity
D0784_RS02895	COG0316	Belongs to the HesB IscA family
D0784_RS02910	COG0633	Ferredoxin
D0784_RS02915	COG2975	iron-sulfur cluster assembly
D0784_RS02950	COG2976	Protein conserved in bacteria
D0784_RS02955	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
D0784_RS02970	COG2203	Gaf domain
D0784_RS02970	COG2199	diguanylate cyclase activity
D0784_RS02985	COG0517	IMP dehydrogenase activity
D0784_RS02985	COG0516	GMP reductase activity
D0784_RS02995	COG1757	Na H antiporter
D0784_RS03005	COG1584	GPR1 FUN34 yaaH family protein
D0784_RS03010	COG1115	amino acid carrier protein
D0784_RS03020	COG0583	DNA-binding transcription factor activity
D0784_RS03040	COG0668	transmembrane transport
D0784_RS03045	COG1574	metal-dependent hydrolase with the TIM-barrel fold
D0784_RS03050	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
D0784_RS03070	COG1289	transmembrane transporter activity
D0784_RS03075	COG0583	DNA-binding transcription factor activity
D0784_RS03090	COG2867	negative regulation of translational initiation
D0784_RS03095	COG2914	Belongs to the UPF0125 (RnfH) family
D0784_RS03100	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
D0784_RS03110	COG0497	DNA recombination
D0784_RS03125	COG1301	dicarboxylic acid transport
D0784_RS03145	COG4969	Belongs to the N-Me-Phe pilin family
D0784_RS03165	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
D0784_RS03170	COG0590	tRNA wobble adenosine to inosine editing
D0784_RS03185	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
D0784_RS03185	COG0047	phosphoribosylformylglycinamidine synthase activity
D0784_RS03210	COG2195	Cleaves the N-terminal amino acid of tripeptides
D0784_RS03215	COG2252	PERMEase
D0784_RS03225	COG1073	alpha beta
D0784_RS03240	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
D0784_RS03245	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
D0784_RS03250	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
D0784_RS03250	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
D0784_RS03275	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
D0784_RS03280	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
D0784_RS03290	COG0142	geranyltranstransferase activity
D0784_RS03300	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
D0784_RS03315	COG0583	DNA-binding transcription factor activity
D0784_RS03325	COG2363	Small membrane protein
D0784_RS03345	COG1611	Belongs to the LOG family
D0784_RS03370	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
D0784_RS03375	COG0737	Belongs to the 5'-nucleotidase family
D0784_RS03385	COG1464	Belongs to the NlpA lipoprotein family
D0784_RS03390	COG2011	ABC-type metal ion transport system permease component
D0784_RS03395	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
D0784_RS03400	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
D0784_RS03410	COG1263	PTS System
D0784_RS03410	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D0784_RS03415	COG0366	Alpha amylase catalytic
D0784_RS03420	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
D0784_RS03425	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
D0784_RS03445	COG1686	Belongs to the peptidase S11 family
D0784_RS03450	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
D0784_RS03455	COG0772	Belongs to the SEDS family
D0784_RS03460	COG0768	penicillin binding
D0784_RS03470	COG0799	negative regulation of ribosome biogenesis
D0784_RS03475	COG1466	dna polymerase III delta subunit
D0784_RS03480	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
D0784_RS03490	COG2888	peptidyl-tyrosine sulfation
D0784_RS03495	COG0815	Transfers the fatty acyl group on membrane lipoproteins
D0784_RS03500	COG4535	Mg2 and Co2 transporter CorC
D0784_RS03510	COG1702	phosphate starvation-inducible protein PhoH
D0784_RS03525	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
D0784_RS03650	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
D0784_RS03675	COG2890	protein-(glutamine-N5) methyltransferase activity
D0784_RS03680	COG3094	Invasion gene expression up-regulator, SirB
D0784_RS03685	COG2912	Transglutaminase-like superfamily
D0784_RS03695	COG0737	Belongs to the 5'-nucleotidase family
D0784_RS03700	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
D0784_RS03705	COG1187	pseudouridine synthase activity
D0784_RS03710	COG2840	Smr protein MutS2
D0784_RS03750	COG2217	Heavy metal translocating P-type atpase
D0784_RS03750	COG2608	mercury ion transmembrane transporter activity
D0784_RS03765	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
D0784_RS03825	COG0835	chemotaxis
D0784_RS03825	COG0784	Response regulator, receiver
D0784_RS03830	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
D0784_RS03835	COG1815	bacterial-type flagellum-dependent cell motility
D0784_RS03840	COG1558	bacterial-type flagellum-dependent cell motility
D0784_RS03850	COG1749	Flagellar hook protein flgE
D0784_RS03855	COG4787	bacterial-type flagellum-dependent cell motility
D0784_RS03865	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
D0784_RS03870	COG1706	bacterial-type flagellum-dependent cell motility
D0784_RS03875	COG3951	Flagellar rod assembly protein muramidase FlgJ
D0784_RS03875	COG1705	Flagellar rod assembly protein muramidase FlgJ
D0784_RS03890	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D0784_RS03900	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D0784_RS03905	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D0784_RS03910	COG2190	(PTS) system
D0784_RS03915	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
D0784_RS03920	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
D0784_RS03930	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
D0784_RS03935	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
D0784_RS03970	COG0330	HflC and HflK could
D0784_RS03975	COG2194	sulfuric ester hydrolase activity
D0784_RS03990	COG1192	Involved in chromosome partitioning
D0784_RS03995	COG1215	transferase activity, transferring glycosyl groups
D0784_RS04000	COG1215	transferase activity, transferring glycosyl groups
D0784_RS04005	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
D0784_RS04010	COG0457	Tetratricopeptide repeat
D0784_RS04010	COG3118	belongs to the thioredoxin family
D0784_RS04015	COG3118	belongs to the thioredoxin family
D0784_RS04025	COG0300	oxidoreductase activity
D0784_RS04030	COG1090	epimerase
D0784_RS04060	COG0622	Phosphoesterase
D0784_RS04080	COG3710	Transcriptional regulator
D0784_RS04095	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
D0784_RS04100	COG3104	oligopeptide transport
D0784_RS04110	COG0367	asparagine synthase
D0784_RS04115	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
D0784_RS04115	COG4651	solute:proton antiporter activity
D0784_RS04120	COG1940	carbohydrate kinase activity
D0784_RS04120	COG1846	Transcriptional regulator
D0784_RS04125	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
D0784_RS04135	COG2190	(PTS) system
D0784_RS04135	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D0784_RS04135	COG1263	PTS System
D0784_RS04145	COG0735	belongs to the Fur family
D0784_RS04165	COG0596	Alpha beta hydrolase
D0784_RS04170	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
D0784_RS04175	COG0033	Phosphoglucomutase
D0784_RS04185	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
D0784_RS04200	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
D0784_RS04205	COG1053	succinate dehydrogenase
D0784_RS04215	COG0567	Dehydrogenase, E1 component
D0784_RS04220	COG0508	dehydrogenase complex catalyzes the overall conversion of
D0784_RS04235	COG1108	ABC-type Mn2 Zn2 transport systems permease components
D0784_RS04240	COG1121	(ABC) transporter
D0784_RS04245	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
D0784_RS04250	COG4977	sequence-specific DNA binding
D0784_RS04255	COG1918	ferrous iron import across plasma membrane
D0784_RS04290	COG3102	Protein conserved in bacteria
D0784_RS04305	COG0788	formyltetrahydrofolate deformylase activity
D0784_RS04315	COG1199	ATP-dependent helicase activity
D0784_RS04320	COG1214	PFAM Peptidase M22, glycoprotease
D0784_RS04330	COG3065	identical protein binding
D0784_RS04335	COG2267	carboxylic ester hydrolase activity
D0784_RS04340	COG0318	PFAM AMP-dependent synthetase and ligase
D0784_RS04345	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
D0784_RS04350	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
D0784_RS04355	COG2894	cell division
D0784_RS04370	COG2951	lytic endotransglycosylase activity
D0784_RS04380	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
D0784_RS04385	COG2852	Protein conserved in bacteria
D0784_RS04515	COG1733	regulation of RNA biosynthetic process
D0784_RS04520	COG0604	alcohol dehydrogenase
D0784_RS04525	COG1902	pentaerythritol trinitrate reductase activity
D0784_RS04530	COG1902	pentaerythritol trinitrate reductase activity
D0784_RS04535	COG0583	DNA-binding transcription factor activity
D0784_RS04540	COG2814	Major facilitator Superfamily
D0784_RS04550	COG1396	sequence-specific DNA binding
D0784_RS04555	COG3550	peptidyl-serine autophosphorylation
D0784_RS04565	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
D0784_RS04580	COG1028	Short-chain dehydrogenase reductase Sdr
D0784_RS04590	COG1169	isochorismate synthase
D0784_RS04595	COG1021	2,3-dihydroxybenzoate-AMP ligase
D0784_RS04600	COG1535	isochorismatase
D0784_RS04600	COG3433	isochorismatase activity
D0784_RS04605	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D0784_RS04605	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D0784_RS04620	COG4771	TonB-dependent receptor
D0784_RS04625	COG1253	flavin adenine dinucleotide binding
D0784_RS04630	COG0513	Belongs to the DEAD box helicase family
D0784_RS04635	COG0569	domain protein
D0784_RS04640	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
D0784_RS04660	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
D0784_RS04665	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
D0784_RS04670	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
D0784_RS04705	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
D0784_RS04710	COG0776	regulation of translation
D0784_RS04715	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D0784_RS04720	COG1555	photosystem II stabilization
D0784_RS04740	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
D0784_RS04745	COG0436	Aminotransferase
D0784_RS04750	COG1169	isochorismate synthase
D0784_RS04760	COG0596	Alpha beta hydrolase
D0784_RS04765	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
D0784_RS04780	COG1263	PTS System
D0784_RS04780	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D0784_RS04780	COG2190	(PTS) system
D0784_RS04785	COG0583	DNA-binding transcription factor activity
D0784_RS04795	COG2855	membrane
D0784_RS04855	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D0784_RS04880	COG1522	sequence-specific DNA binding
D0784_RS04885	COG1946	Acyl-CoA thioesterase
D0784_RS04890	COG3126	Type III secretion system lipoprotein chaperone (YscW)
D0784_RS04905	COG3706	GGDEF domain
D0784_RS04915	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
D0784_RS04920	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
D0784_RS04925	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
D0784_RS04930	COG0516	GMP reductase activity
D0784_RS04930	COG0517	IMP dehydrogenase activity
D0784_RS04940	COG2217	Heavy metal translocating P-type atpase
D0784_RS04960	COG0537	adenosine 5'-monophosphoramidase activity
D0784_RS04990	COG1252	NADH dehydrogenase
D0784_RS05005	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
D0784_RS05015	COG4591	ABC-type transport system involved in lipoprotein release permease component
D0784_RS05020	COG1136	(ABC) transporter
D0784_RS05025	COG4591	ABC-type transport system involved in lipoprotein release permease component
D0784_RS05035	COG0658	competence protein
D0784_RS05035	COG2333	competence protein COMEC
D0784_RS05040	COG1132	(ABC) transporter
D0784_RS05060	COG2719	SpoVR family
D0784_RS05065	COG2718	Belongs to the UPF0229 family
D0784_RS05070	COG2766	serine protein kinase
D0784_RS05090	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
D0784_RS05100	COG1882	Formate acetyltransferase
D0784_RS05135	COG0708	Exodeoxyribonuclease III
D0784_RS05145	COG3923	Primosomal replication protein n
D0784_RS05150	COG0730	response to heat
D0784_RS05155	COG1199	ATP-dependent helicase activity
D0784_RS05165	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
D0784_RS05170	COG1187	pseudouridine synthase activity
D0784_RS05180	COG1278	Cold shock
D0784_RS05190	COG0542	response to heat
D0784_RS05195	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
D0784_RS05225	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
D0784_RS05230	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
D0784_RS05235	COG0297	glycogen (starch) synthase activity
D0784_RS05255	COG3070	regulator of competence-specific genes
D0784_RS05270	COG0745	RESPONSE REGULATOR receiver
D0784_RS05275	COG3385	transposase activity
D0784_RS05280	COG1434	Gram-negative-bacterium-type cell wall biogenesis
D0784_RS05285	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
D0784_RS05295	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
D0784_RS05300	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
D0784_RS05315	COG0318	PFAM AMP-dependent synthetase and ligase
D0784_RS05340	COG4067	protein conserved in archaea
D0784_RS05340	COG0189	ligase activity
D0784_RS05360	COG1801	Protein of unknown function DUF72
D0784_RS05375	COG0840	transmembrane signaling receptor activity
D0784_RS05380	COG0632	four-way junction helicase activity
D0784_RS05390	COG1271	oxidase subunit
D0784_RS05395	COG1294	oxidase, subunit
D0784_RS05400	COG4890	Cyd operon protein YbgT
D0784_RS05410	COG0824	Thioesterase
D0784_RS05415	COG0811	peptide transport
D0784_RS05430	COG0823	Involved in the tonB-independent uptake of proteins
D0784_RS05435	COG2885	chlorophyll binding
D0784_RS05440	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
D0784_RS05455	COG3766	membrane
D0784_RS05465	COG0754	glutathionylspermidine amidase activity
D0784_RS05475	COG2205	protein histidine kinase activity
D0784_RS05475	COG0784	Response regulator, receiver
D0784_RS05505	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
D0784_RS05520	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
D0784_RS05610	COG4669	(LipO)protein
D0784_RS05640	COG3177	Filamentation induced by cAMP protein fic
D0784_RS05655	COG3385	transposase activity
D0784_RS05660	COG4792	protein secretion
D0784_RS05665	COG4791	protein targeting
D0784_RS05670	COG4794	Type iii secretion
D0784_RS05675	COG4790	Type iii secretion
D0784_RS05745	COG0457	Tetratricopeptide repeat
D0784_RS05765	COG0789	Transcriptional regulator
D0784_RS05770	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
D0784_RS05775	COG3385	transposase activity
D0784_RS05790	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D0784_RS05790	COG1263	PTS System
D0784_RS05795	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D0784_RS05800	COG1621	beta-fructofuranosidase activity
D0784_RS05805	COG2824	Alkylphosphonate utilization operon protein PhnA
D0784_RS05820	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D0784_RS05825	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D0784_RS05835	COG2186	Transcriptional regulator
D0784_RS05845	COG1288	antiporter activity
D0784_RS05860	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
D0784_RS05880	COG3568	Endonuclease Exonuclease Phosphatase
D0784_RS05905	COG4934	collagen metabolic process
D0784_RS05910	COG0402	S-adenosylhomocysteine deaminase activity
D0784_RS05935	COG0583	DNA-binding transcription factor activity
D0784_RS05945	COG0686	Belongs to the AlaDH PNT family
D0784_RS05955	COG1674	ftsk spoiiie
D0784_RS05965	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
D0784_RS05985	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
D0784_RS05990	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
D0784_RS06005	COG2226	methyltransferase
D0784_RS06030	COG0300	oxidoreductase activity
D0784_RS06045	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
D0784_RS06065	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
D0784_RS06075	COG0482	sulfurtransferase activity
D0784_RS06085	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D0784_RS06095	COG1757	Na H antiporter
D0784_RS06110	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
D0784_RS06120	COG0131	Imidazoleglycerol-phosphate dehydratase
D0784_RS06120	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
D0784_RS06125	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
D0784_RS06130	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
D0784_RS06140	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
D0784_RS06140	COG0140	phosphoribosyl-ATP diphosphatase activity
D0784_RS06145	COG3012	SEC-C Motif Domain Protein
D0784_RS06150	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
D0784_RS06155	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
D0784_RS06160	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
D0784_RS06165	COG0215	cysteine-tRNA ligase activity
D0784_RS06170	COG1435	thymidine kinase activity
D0784_RS06175	COG1434	Gram-negative-bacterium-type cell wall biogenesis
D0784_RS06200	COG2116	formate transmembrane transporter activity
D0784_RS06205	COG0390	transport system, permease component
D0784_RS06210	COG4459	periplasmic nitrate reductase
D0784_RS06215	COG3005	denitrification pathway
D0784_RS06235	COG1227	inorganic diphosphatase activity
D0784_RS06245	COG4172	Belongs to the ABC transporter superfamily
D0784_RS06255	COG4171	peptide transport system, permease
D0784_RS06260	COG4168	peptide transport system, permease
D0784_RS06270	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
D0784_RS06275	COG1842	Phage shock protein A
D0784_RS06285	COG1983	PspC domain protein
D0784_RS06305	COG2818	Glycosylase
D0784_RS06315	COG0626	cystathionine gamma-synthase activity
D0784_RS06325	COG0733	neurotransmitter:sodium symporter activity
D0784_RS06335	COG0564	pseudouridine synthase activity
D0784_RS06345	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
D0784_RS06350	COG1151	hydroxylamine reductase activity
D0784_RS06355	COG3604	Transcriptional regulator
D0784_RS06360	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
D0784_RS06365	COG4136	ATPase activity
D0784_RS06370	COG4135	transport system, permease component
D0784_RS06375	COG4134	Bacterial extracellular solute-binding protein
D0784_RS06380	COG0398	Pfam SNARE associated Golgi protein
D0784_RS06390	COG0493	'glutamate synthase
D0784_RS06415	COG0659	secondary active sulfate transmembrane transporter activity
D0784_RS06425	COG3313	Fe-S protein
D0784_RS06485	COG3706	GGDEF domain
D0784_RS06490	COG1061	Type III restriction enzyme res subunit
D0784_RS06495	COG1187	pseudouridine synthase activity
D0784_RS06500	COG2814	Major facilitator Superfamily
D0784_RS06510	COG4667	esterase of the alpha-beta hydrolase superfamily
D0784_RS06515	COG0702	epimerase
D0784_RS06520	COG0534	Mate efflux family protein
D0784_RS06525	COG4181	ATPase activity
D0784_RS06555	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
D0784_RS06565	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
D0784_RS06575	COG1737	Transcriptional regulator
D0784_RS06580	COG0076	glutamate decarboxylase activity
D0784_RS06590	COG2431	L-lysine efflux transmembrane transporter activity
D0784_RS06605	COG3070	regulator of competence-specific genes
D0784_RS06620	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D0784_RS06620	COG4191	Histidine kinase
D0784_RS06630	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
D0784_RS06645	COG5001	Diguanylate cyclase
D0784_RS06675	COG2200	EAL domain
D0784_RS06680	COG0583	DNA-binding transcription factor activity
D0784_RS06685	COG2610	gluconate transmembrane transporter activity
D0784_RS06695	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
D0784_RS06700	COG4988	ABC transporter
D0784_RS06705	COG0492	ferredoxin-NADP+ reductase activity
D0784_RS06725	COG3706	GGDEF domain
D0784_RS06730	COG0471	metal ion transport
D0784_RS06735	COG2949	membrane
D0784_RS06745	COG1643	Atp-dependent helicase
D0784_RS06805	COG0277	FAD linked oxidase domain protein
D0784_RS06805	COG0247	lactate metabolic process
D0784_RS06850	COG2986	histidine ammonia-lyase
D0784_RS06860	COG0010	Belongs to the arginase family
D0784_RS06870	COG2188	Transcriptional regulator
D0784_RS06910	COG0251	oxidation-reduction process
D0784_RS06950	COG3706	GGDEF domain
D0784_RS06960	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
D0784_RS06960	COG0072	phenylalanine-tRNA ligase activity
D0784_RS06965	COG1535	isochorismatase
D0784_RS06965	COG3433	isochorismatase activity
D0784_RS06970	COG1132	(ABC) transporter
D0784_RS06975	COG2375	cellular response to nickel ion
D0784_RS06975	COG1132	(ABC) transporter
D0784_RS06985	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
D0784_RS07005	COG4774	siderophore transport
D0784_RS07010	COG4607	ABC-type enterochelin transport system periplasmic component
D0784_RS07015	COG4605	iron ion homeostasis
D0784_RS07020	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D0784_RS07070	COG1346	cytolysis
D0784_RS07080	COG2925	Exonuclease
D0784_RS07090	COG1823	symporter activity
D0784_RS07095	COG0702	epimerase
D0784_RS07100	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
D0784_RS07110	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
D0784_RS07135	COG4139	cobalamin transport
D0784_RS07165	COG0583	DNA-binding transcription factor activity
D0784_RS07200	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
D0784_RS07205	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
D0784_RS07210	COG3475	LICD family
D0784_RS07215	COG1451	nucleotide metabolic process
D0784_RS07240	COG0813	purine-nucleoside phosphorylase activity
D0784_RS07265	COG2195	Cleaves the N-terminal amino acid of tripeptides
D0784_RS07280	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
D0784_RS07290	COG0625	glutathione transferase activity
D0784_RS07315	COG0786	glutamate:sodium symporter activity
D0784_RS07330	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D0784_RS07365	COG0519	Catalyzes the synthesis of GMP from XMP
D0784_RS07370	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
D0784_RS07380	COG0668	transmembrane transport
D0784_RS07385	COG3247	response to pH
D0784_RS07405	COG1846	Transcriptional regulator
D0784_RS07430	COG0110	maltose O-acetyltransferase activity
D0784_RS07450	COG4999	Histidine kinase
D0784_RS07450	COG3850	Histidine kinase
D0784_RS07450	COG3437	response regulator, receiver
D0784_RS07450	COG2205	protein histidine kinase activity
D0784_RS07455	COG5001	Diguanylate cyclase
D0784_RS07455	COG3300	MHYT domain
D0784_RS07480	COG3064	Membrane
D0784_RS07490	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
D0784_RS07495	COG1215	transferase activity, transferring glycosyl groups
D0784_RS07500	COG0438	transferase activity, transferring glycosyl groups
D0784_RS07530	COG0438	transferase activity, transferring glycosyl groups
D0784_RS07535	COG0438	transferase activity, transferring glycosyl groups
D0784_RS07540	COG2204	response regulator
D0784_RS07560	COG2885	chlorophyll binding
D0784_RS07570	COG1793	dna ligase
D0784_RS07580	COG0534	Mate efflux family protein
D0784_RS07585	COG0307	riboflavin synthase, alpha
D0784_RS07595	COG3001	Fructosamine kinase
D0784_RS07600	COG2201	protein-glutamate methylesterase activity
D0784_RS07605	COG3706	GGDEF domain
D0784_RS07615	COG0791	NLP P60 protein
D0784_RS07620	COG0840	transmembrane signaling receptor activity
D0784_RS07625	COG0494	nUDIX hydrolase
D0784_RS07665	COG3148	PFAM DTW domain containing protein
D0784_RS07670	COG1940	carbohydrate kinase activity
D0784_RS07680	COG0303	'Molybdopterin
D0784_RS07690	COG3842	ATPase activity
D0784_RS07695	COG4662	Binding-protein-dependent transport system inner membrane component
D0784_RS07705	COG2204	response regulator
D0784_RS07710	COG4191	Histidine kinase
D0784_RS07730	COG0488	(ABC) transporter
D0784_RS07745	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
D0784_RS07765	COG3381	protein complex oligomerization
D0784_RS07775	COG0243	molybdopterin cofactor binding
D0784_RS07775	COG3383	formate dehydrogenase (NAD+) activity
D0784_RS07780	COG0437	4 iron, 4 sulfur cluster binding
D0784_RS07800	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
D0784_RS07805	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
D0784_RS07815	COG1177	transmembrane transport
D0784_RS07825	COG3842	ATPase activity
D0784_RS07850	COG0589	response to stress
D0784_RS07855	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
D0784_RS07870	COG2217	Heavy metal translocating P-type atpase
D0784_RS07880	COG2010	Cytochrome c
D0784_RS07895	COG3278	Belongs to the heme-copper respiratory oxidase family
D0784_RS07910	COG2205	protein histidine kinase activity
D0784_RS07910	COG0784	Response regulator, receiver
D0784_RS07915	COG2801	Transposase and inactivated derivatives
D0784_RS07945	COG1067	ATP-dependent peptidase activity
D0784_RS07965	COG0488	(ABC) transporter
D0784_RS07990	COG2902	Dehydrogenase
D0784_RS08000	COG0308	aminopeptidase N
D0784_RS08010	COG0793	Belongs to the peptidase S41A family
D0784_RS08015	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
D0784_RS08020	COG1956	GAF domain-containing protein
D0784_RS08025	COG1132	(ABC) transporter
D0784_RS08030	COG2995	paraquat-inducible protein a
D0784_RS08035	COG3008	intermembrane lipid transfer
D0784_RS08060	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
D0784_RS08080	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D0784_RS08085	COG4597	amino acid ABC transporter
D0784_RS08090	COG0765	amino acid transport
D0784_RS08095	COG1126	abc transporter atp-binding protein
D0784_RS08100	COG0670	Belongs to the BI1 family
D0784_RS08110	COG2920	part of a sulfur-relay system
D0784_RS08115	COG1254	Belongs to the acylphosphatase family
D0784_RS08120	COG0840	transmembrane signaling receptor activity
D0784_RS08170	COG3706	GGDEF domain
D0784_RS08180	COG0602	queuosine metabolic process
D0784_RS08185	COG0561	phosphatase activity
D0784_RS08205	COG3119	arylsulfatase activity
D0784_RS08220	COG2828	Protein conserved in bacteria
D0784_RS08230	COG0372	Belongs to the citrate synthase family
D0784_RS08235	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
D0784_RS08345	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
D0784_RS08350	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
D0784_RS08380	COG0730	response to heat
D0784_RS08385	COG2358	TRAP transporter, solute receptor (TAXI family
D0784_RS08390	COG1012	belongs to the aldehyde dehydrogenase family
D0784_RS08395	COG3284	Transcriptional regulator
D0784_RS08425	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
D0784_RS08430	COG0363	glucosamine-6-phosphate deaminase activity
D0784_RS08435	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
D0784_RS08440	COG4565	transcriptional regulatory protein
D0784_RS08445	COG3290	protein histidine kinase activity
D0784_RS08460	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D0784_RS08500	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
D0784_RS08505	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
D0784_RS08550	COG1404	Belongs to the peptidase S8 family
D0784_RS08555	COG1858	cytochrome C peroxidase
D0784_RS08565	COG0527	aspartate kinase activity
D0784_RS08570	COG0662	Cupin 2, conserved barrel domain protein
D0784_RS08575	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
D0784_RS08580	COG0456	acetyltransferase
D0784_RS08585	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
D0784_RS08595	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
D0784_RS08600	COG0534	Mate efflux family protein
D0784_RS08605	COG0215	cysteine-tRNA ligase activity
D0784_RS08610	COG1368	sulfuric ester hydrolase activity
D0784_RS08635	COG1115	amino acid carrier protein
D0784_RS08670	COG1280	lysine exporter protein (LysE YggA)
D0784_RS08675	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
D0784_RS08695	COG1560	Kdo2-lipid A biosynthetic process
D0784_RS08700	COG1280	lysine exporter protein (LysE YggA)
D0784_RS08705	COG0531	amino acid
D0784_RS08735	COG3063	Type IV pilus biogenesis stability protein PilW
D0784_RS08760	COG1643	Atp-dependent helicase
D0784_RS08765	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
D0784_RS08780	COG3302	dmso reductase anchor subunit
D0784_RS08785	COG0437	4 iron, 4 sulfur cluster binding
D0784_RS08790	COG0243	molybdopterin cofactor binding
D0784_RS08805	COG0395	ABC-type sugar transport system, permease component
D0784_RS08815	COG1653	transport
D0784_RS08825	COG3459	Glycosyltransferase 36 associated
D0784_RS08830	COG3842	ATPase activity
D0784_RS08850	COG3227	Zinc metalloprotease (Elastase)
D0784_RS08880	COG3706	GGDEF domain
D0784_RS08890	COG0443	Heat shock 70 kDa protein
D0784_RS08895	COG0443	Heat shock 70 kDa protein
D0784_RS08920	COG0583	DNA-binding transcription factor activity
D0784_RS08925	COG2165	general secretion pathway protein
D0784_RS08930	COG1132	(ABC) transporter
D0784_RS08935	COG1132	(ABC) transporter
D0784_RS08955	COG0814	amino acid
D0784_RS08960	COG1454	alcohol dehydrogenase
D0784_RS08965	COG4221	oxidoreductase activity
D0784_RS08970	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
D0784_RS08980	COG0861	Integral membrane protein TerC family
D0784_RS08990	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
D0784_RS08995	COG1328	CTP reductase activity
D0784_RS09000	COG1280	lysine exporter protein (LysE YggA)
D0784_RS09020	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D0784_RS09020	COG4191	Histidine kinase
D0784_RS09025	COG0471	metal ion transport
D0784_RS09030	COG0456	acetyltransferase
D0784_RS09060	COG3340	Belongs to the peptidase S51 family
D0784_RS09075	COG4221	oxidoreductase activity
D0784_RS09165	COG2801	Transposase and inactivated derivatives
D0784_RS09225	COG2026	Addiction module toxin, RelE StbE family
D0784_RS09300	COG2801	Transposase and inactivated derivatives
D0784_RS09350	COG0519	Catalyzes the synthesis of GMP from XMP
D0784_RS09380	COG2026	Addiction module toxin, RelE StbE family
D0784_RS09390	COG2944	sequence-specific DNA binding
D0784_RS09395	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
D0784_RS09460	COG2801	Transposase and inactivated derivatives
D0784_RS09680	COG2801	Transposase and inactivated derivatives
D0784_RS09800	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D0784_RS09815	COG3106	COG3106 Predicted ATPase
D0784_RS09830	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
D0784_RS09835	COG0784	Response regulator, receiver
D0784_RS09835	COG2205	protein histidine kinase activity
D0784_RS09850	COG0814	amino acid
D0784_RS09855	COG1760	l-serine dehydratase
D0784_RS09870	COG2197	response regulator
D0784_RS09875	COG0720	synthase
D0784_RS09885	COG0017	Asparaginyl-tRNA synthetase
D0784_RS09900	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D0784_RS09920	COG1448	Aminotransferase
D0784_RS09940	COG0840	transmembrane signaling receptor activity
D0784_RS09945	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
D0784_RS09950	COG1846	Transcriptional regulator
D0784_RS09975	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
D0784_RS09990	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
D0784_RS09995	COG3108	Peptidase M15
D0784_RS10000	COG2989	Protein conserved in bacteria
D0784_RS10035	COG3088	subunit of a heme lyase
D0784_RS10035	COG4235	cytochrome complex assembly
D0784_RS10045	COG1138	Cytochrome C-type biogenesis protein
D0784_RS10050	COG3301	Polysulphide reductase, NrfD
D0784_RS10055	COG0437	4 iron, 4 sulfur cluster binding
D0784_RS10065	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
D0784_RS10085	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
D0784_RS10095	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
D0784_RS10100	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
D0784_RS10110	COG1546	Belongs to the CinA family
D0784_RS10110	COG1058	Belongs to the CinA family
D0784_RS10130	COG0019	diaminopimelate decarboxylase activity
D0784_RS10170	COG0322	excinuclease ABC activity
D0784_RS10175	COG2197	response regulator
D0784_RS10180	COG0417	DNA replication proofreading
D0784_RS10200	COG1187	pseudouridine synthase activity
D0784_RS10210	COG0009	L-threonylcarbamoyladenylate synthase
D0784_RS10215	COG0613	PHP domain protein
D0784_RS10225	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
D0784_RS10230	COG0512	Glutamine amidotransferase of anthranilate synthase
D0784_RS10240	COG0134	indole-3-glycerol-phosphate synthase activity
D0784_RS10240	COG0135	phosphoribosylanthranilate isomerase activity
D0784_RS10250	COG0159	tryptophan synthase activity
D0784_RS10255	COG1301	dicarboxylic acid transport
D0784_RS10285	COG2350	Protein conserved in bacteria
D0784_RS10315	COG5001	Diguanylate cyclase
D0784_RS10315	COG1716	ATPase activity
D0784_RS10320	COG1032	radical SAM domain protein
D0784_RS10345	COG0446	pyridine nucleotide-disulphide oxidoreductase
D0784_RS10355	COG0251	oxidation-reduction process
D0784_RS10360	COG2964	Protein conserved in bacteria
D0784_RS10365	COG2175	clavaminate synthase activity
D0784_RS10370	COG0840	transmembrane signaling receptor activity
D0784_RS10380	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
D0784_RS10385	COG0463	Glycosyl transferase, family 2
D0784_RS10390	COG0745	RESPONSE REGULATOR receiver
D0784_RS10395	COG3850	Histidine kinase
D0784_RS10395	COG5002	protein histidine kinase activity
D0784_RS10485	COG2176	DNA-directed DNA polymerase activity
D0784_RS10500	COG1136	(ABC) transporter
D0784_RS10500	COG0577	efflux transmembrane transporter activity
D0784_RS10505	COG1136	(ABC) transporter
D0784_RS10505	COG0577	efflux transmembrane transporter activity
D0784_RS10520	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D0784_RS10555	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
D0784_RS10565	COG3118	belongs to the thioredoxin family
D0784_RS10570	COG4232	protein-disulfide reductase activity
D0784_RS10585	COG2211	Major facilitator Superfamily
D0784_RS10600	COG4580	involved in the transport of maltose and maltodextrins
D0784_RS10610	COG3250	beta-galactosidase activity
D0784_RS10615	COG1609	Transcriptional regulator
D0784_RS10620	COG2995	paraquat-inducible protein a
D0784_RS10625	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
D0784_RS10625	COG3008	intermembrane lipid transfer
D0784_RS10630	COG3009	Protein conserved in bacteria
D0784_RS10650	COG4166	transmembrane transport
D0784_RS10660	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
D0784_RS10665	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
D0784_RS10675	COG0539	negative regulation of cytoplasmic translation
D0784_RS10690	COG0616	signal peptide processing
D0784_RS10695	COG1028	Short-chain dehydrogenase reductase Sdr
D0784_RS10715	COG0835	chemotaxis
D0784_RS10715	COG0784	Response regulator, receiver
D0784_RS10720	COG1940	carbohydrate kinase activity
D0784_RS10735	COG3710	Transcriptional regulator
D0784_RS10745	COG2272	Belongs to the type-B carboxylesterase lipase family
D0784_RS10770	COG4667	esterase of the alpha-beta hydrolase superfamily
D0784_RS10785	COG0733	neurotransmitter:sodium symporter activity
D0784_RS10800	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D0784_RS10800	COG1263	PTS System
D0784_RS10805	COG0084	hydrolase, TatD family'
D0784_RS10820	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
D0784_RS10850	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
D0784_RS10865	COG1399	metal-binding, possibly nucleic acid-binding protein
D0784_RS10870	COG0424	maF-like protein
D0784_RS10875	COG0564	pseudouridine synthase activity
D0784_RS10880	COG1530	ribonuclease E activity
D0784_RS10890	COG0659	secondary active sulfate transmembrane transporter activity
D0784_RS10895	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
D0784_RS10900	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
D0784_RS10930	COG2186	Transcriptional regulator
D0784_RS10940	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
D0784_RS10945	COG0653	protein targeting
D0784_RS10950	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
D0784_RS10960	COG0366	Alpha amylase catalytic
D0784_RS10965	COG1122	ATPase activity
D0784_RS10970	COG4120	Belongs to the binding-protein-dependent transport system permease family
D0784_RS10990	COG0857	belongs to the CobB CobQ family
D0784_RS10990	COG0280	phosphate acetyltransferase
D0784_RS10995	COG3174	membrane
D0784_RS11000	COG0435	Glutathione S-transferase
D0784_RS11010	COG0444	Belongs to the ABC transporter superfamily
D0784_RS11015	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
D0784_RS11020	COG0601	transmembrane transport
D0784_RS11030	COG0314	molybdopterin synthase activity
D0784_RS11035	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
D0784_RS11045	COG0521	Mo-molybdopterin cofactor biosynthetic process
D0784_RS11050	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
D0784_RS11055	COG0391	Required for morphogenesis under gluconeogenic growth conditions
D0784_RS11070	COG0556	nucleotide-excision repair
D0784_RS11105	COG0745	RESPONSE REGULATOR receiver
D0784_RS11110	COG1882	Formate acetyltransferase
D0784_RS11115	COG4657	Part of a membrane complex involved in electron transport
D0784_RS11125	COG4656	Part of a membrane complex involved in electron transport
D0784_RS11130	COG4658	electron transport chain
D0784_RS11135	COG4659	FMN binding
D0784_RS11140	COG4660	Part of a membrane complex involved in electron transport
D0784_RS11145	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
D0784_RS11150	COG0346	lactoylglutathione lyase activity
D0784_RS11160	COG2885	chlorophyll binding
D0784_RS11170	COG2056	Na+-H+ antiporter family
D0784_RS11220	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
D0784_RS11220	COG2885	chlorophyll binding
D0784_RS11230	COG2885	chlorophyll binding
D0784_RS11230	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
D0784_RS11290	COG4974	Belongs to the 'phage' integrase family
D0784_RS11295	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
D0784_RS11315	COG1454	alcohol dehydrogenase
D0784_RS11315	COG1012	belongs to the aldehyde dehydrogenase family
D0784_RS11320	COG2095	MarC family integral membrane protein
D0784_RS11325	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
D0784_RS11335	COG2165	general secretion pathway protein
D0784_RS11340	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
D0784_RS11345	COG1757	Na H antiporter
D0784_RS11370	COG3083	sulfuric ester hydrolase activity
D0784_RS11385	COG4269	membrane
D0784_RS11395	COG0123	including yeast histone deacetylase and acetoin utilization protein
D0784_RS11410	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
D0784_RS11415	COG0778	Nitroreductase
D0784_RS11420	COG1902	pentaerythritol trinitrate reductase activity
D0784_RS11420	COG0446	pyridine nucleotide-disulphide oxidoreductase
D0784_RS11425	COG0616	signal peptide processing
D0784_RS11430	COG0252	asparaginase activity
D0784_RS11435	COG3139	Protein of unknown function (DUF1315)
D0784_RS11445	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
D0784_RS11450	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
D0784_RS11470	COG2226	methyltransferase
D0784_RS11490	COG1785	Belongs to the alkaline phosphatase family
D0784_RS11500	COG0346	lactoylglutathione lyase activity
D0784_RS11510	COG0668	transmembrane transport
D0784_RS11515	COG0076	glutamate decarboxylase activity
D0784_RS11520	COG2985	domain, Protein
D0784_RS11525	COG2261	transglycosylase associated protein
D0784_RS11530	COG2983	Belongs to the UPF0260 family
D0784_RS11540	COG2964	Protein conserved in bacteria
D0784_RS11550	COG0251	oxidation-reduction process
D0784_RS11555	COG0814	amino acid
D0784_RS11560	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
D0784_RS11565	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
D0784_RS11575	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
D0784_RS11585	COG2832	Protein of unknown function (DUF454)
D0784_RS11595	COG0745	RESPONSE REGULATOR receiver
D0784_RS11600	COG0583	DNA-binding transcription factor activity
D0784_RS11605	COG3385	transposase activity
D0784_RS11610	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
D0784_RS11615	COG1286	toxin biosynthetic process
D0784_RS11620	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
D0784_RS11625	COG0285	dihydrofolate synthase activity
D0784_RS11650	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
D0784_RS11655	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
D0784_RS11665	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
D0784_RS11690	COG3101	peptidyl-lysine hydroxylation
D0784_RS11695	COG2860	membrane
D0784_RS11705	COG2890	protein-(glutamine-N5) methyltransferase activity
D0784_RS11715	COG2062	phosphohistidine phosphatase, SixA
D0784_RS11735	COG0183	Belongs to the thiolase family
D0784_RS11760	COG2067	long-chain fatty acid transport protein
D0784_RS11765	COG2853	Lipoprotein
D0784_RS11770	COG4235	cytochrome complex assembly
D0784_RS11770	COG3088	subunit of a heme lyase
D0784_RS11780	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
D0784_RS11785	COG1138	Cytochrome C-type biogenesis protein
D0784_RS11800	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
D0784_RS11805	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
D0784_RS11810	COG4133	protoheme IX ABC transporter activity
D0784_RS11820	COG0835	chemotaxis
D0784_RS11830	COG1192	Involved in chromosome partitioning
D0784_RS11835	COG2201	protein-glutamate methylesterase activity
D0784_RS11840	COG0784	Response regulator, receiver
D0784_RS11840	COG2198	Histidine kinase
D0784_RS11840	COG0643	Histidine kinase
D0784_RS11845	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
D0784_RS11880	COG1684	flagellar biosynthetic protein fliR
D0784_RS11885	COG1987	bacterial-type flagellum assembly
D0784_RS11940	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
D0784_RS11950	COG1677	Flagellar hook-basal body complex protein FliE
D0784_RS11970	COG1516	flagellar protein fliS
D0784_RS11980	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
D0784_RS11985	COG1334	flagellar protein FlaG
D0784_RS11990	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D0784_RS11995	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D0784_RS12005	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D0784_RS12015	COG2211	Major facilitator Superfamily
D0784_RS12020	COG1486	melibiose metabolic process
D0784_RS12025	COG2169	Transcriptional regulator
D0784_RS12030	COG2837	iron assimilation
D0784_RS12055	COG1393	Belongs to the ArsC family
D0784_RS12075	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
D0784_RS12080	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
D0784_RS12085	COG2716	regulation of RNA biosynthetic process
D0784_RS12090	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
D0784_RS12105	COG4783	chaperone-mediated protein folding
D0784_RS12110	COG1393	Belongs to the ArsC family
D0784_RS12130	COG2233	PERMEase
D0784_RS12135	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
D0784_RS12140	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
D0784_RS12145	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
D0784_RS12150	COG0121	glutamine amidotransferase
D0784_RS12155	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
D0784_RS12160	COG1960	acyl-CoA dehydrogenase activity
D0784_RS12190	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
D0784_RS12200	COG2226	methyltransferase
D0784_RS12210	COG1388	LysM domain
D0784_RS12210	COG0741	lytic transglycosylase activity
D0784_RS12225	COG0347	Belongs to the P(II) protein family
D0784_RS12245	COG0587	DNA-directed DNA polymerase activity
D0784_RS12270	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
D0784_RS12275	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
D0784_RS12285	COG0750	zinc metalloprotease
D0784_RS12295	COG0575	Belongs to the CDS family
D0784_RS12300	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
D0784_RS12325	COG0024	Methionine aminopeptidase
D0784_RS12340	COG0564	pseudouridine synthase activity
D0784_RS12345	COG3098	single-species biofilm formation
D0784_RS12380	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
D0784_RS12395	COG1720	tRNA m6t6A37 methyltransferase activity
D0784_RS12420	COG0733	neurotransmitter:sodium symporter activity
D0784_RS12435	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
D0784_RS12440	COG0514	ATP-dependent DNA helicase (RecQ)
D0784_RS12445	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
D0784_RS12460	COG1477	protein flavinylation
D0784_RS12495	COG0271	Belongs to the BolA IbaG family
D0784_RS12525	COG1595	DNA-templated transcription, initiation
D0784_RS12550	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
D0784_RS12555	COG0693	protein deglycase activity
D0784_RS12560	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
D0784_RS12565	COG2166	iron-sulfur cluster assembly
D0784_RS12570	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
D0784_RS12575	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
D0784_RS12590	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
D0784_RS12590	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
D0784_RS12610	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
D0784_RS12615	COG1074	ATP-dependent DNA helicase activity
D0784_RS12620	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
D0784_RS12640	COG3141	response to X-ray
D0784_RS12655	COG2171	N-acyltransferase activity
D0784_RS12670	COG0584	glycerophosphoryl diester phosphodiesterase
D0784_RS12675	COG2271	Major facilitator Superfamily
D0784_RS12685	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
D0784_RS12695	COG1349	DNA-binding transcription factor activity
D0784_RS12700	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
D0784_RS12720	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
D0784_RS12730	COG1263	PTS System
D0784_RS12730	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D0784_RS12735	COG1609	Transcriptional regulator
D0784_RS12740	COG2017	converts alpha-aldose to the beta-anomer
D0784_RS12750	COG1085	galactose-1-phosphate uridylyltransferase
D0784_RS12755	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
D0784_RS12765	COG0768	penicillin binding
D0784_RS12770	COG1609	Transcriptional regulator
D0784_RS12775	COG3250	beta-galactosidase activity
D0784_RS12780	COG2731	YhcH YjgK YiaL family protein
D0784_RS12785	COG0531	amino acid
D0784_RS12790	COG0583	DNA-binding transcription factor activity
D0784_RS12850	COG4964	Belongs to the GSP D family
D0784_RS12880	COG1022	Amp-dependent synthetase and ligase
D0784_RS12910	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
D0784_RS12915	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
D0784_RS12925	COG0560	Phosphoserine phosphatase
D0784_RS12935	COG0813	purine-nucleoside phosphorylase activity
D0784_RS12945	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
D0784_RS12955	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
D0784_RS12960	COG0084	hydrolase, TatD family'
D0784_RS12970	COG3706	GGDEF domain
D0784_RS12990	COG3153	acetyltransferase
D0784_RS12995	COG3154	lipid carrier protein
D0784_RS13005	COG0826	peptidase U32
D0784_RS13010	COG0826	peptidase U32
D0784_RS13015	COG0534	Mate efflux family protein
D0784_RS13035	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
D0784_RS13055	COG0195	Participates in both transcription termination and antitermination
D0784_RS13075	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
D0784_RS13090	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
D0784_RS13095	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
D0784_RS13105	COG1534	Rna-binding protein
D0784_RS13110	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
D0784_RS13115	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
D0784_RS13120	COG2027	D-alanyl-D-alanine carboxypeptidase
D0784_RS13130	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
D0784_RS13135	COG0739	heme binding
D0784_RS13140	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D0784_RS13160	COG0628	permease
D0784_RS13175	COG2198	Histidine kinase
D0784_RS13175	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D0784_RS13175	COG0784	Response regulator, receiver
D0784_RS13175	COG2205	protein histidine kinase activity
D0784_RS13180	COG0747	negative chemotaxis
D0784_RS13190	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
D0784_RS13195	COG0444	Belongs to the ABC transporter superfamily
D0784_RS13200	COG4608	Belongs to the ABC transporter superfamily
D0784_RS13210	COG2971	BadF BadG BcrA BcrD
D0784_RS13225	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
D0784_RS13230	COG3842	ATPase activity
D0784_RS13240	COG1840	ABC-type Fe3 transport system, periplasmic component
D0784_RS13245	COG0004	ammonium transporteR
D0784_RS13260	COG1049	propionate catabolic process, 2-methylcitrate cycle
D0784_RS13265	COG1752	Esterase of the alpha-beta hydrolase superfamily
D0784_RS13270	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
D0784_RS13275	COG1643	Atp-dependent helicase
D0784_RS13290	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
D0784_RS13305	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
D0784_RS13320	COG1560	Kdo2-lipid A biosynthetic process
D0784_RS13325	COG0842	Transport permease protein
D0784_RS13330	COG1131	(ABC) transporter
D0784_RS13335	COG0659	secondary active sulfate transmembrane transporter activity
D0784_RS13340	COG0288	reversible hydration of carbon dioxide
D0784_RS13360	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
D0784_RS13365	COG0508	dehydrogenase complex catalyzes the overall conversion of
D0784_RS13370	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
D0784_RS13375	COG2186	Transcriptional regulator
D0784_RS13400	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
D0784_RS13405	COG1459	type II secretion system
D0784_RS13415	COG0237	dephospho-CoA kinase activity
D0784_RS13420	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
D0784_RS13425	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
D0784_RS13455	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
D0784_RS13460	COG4137	Cytochrome C assembly protein
D0784_RS13465	COG4536	flavin adenine dinucleotide binding
D0784_RS13485	COG0612	Peptidase, M16
D0784_RS13490	COG1238	metal cluster binding
D0784_RS13500	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
D0784_RS13505	COG5016	pyruvate
D0784_RS13505	COG0511	ligase activity, forming carbon-carbon bonds
D0784_RS13510	COG3630	sodium ion export across plasma membrane
D0784_RS13570	COG0527	aspartate kinase activity
D0784_RS13585	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
D0784_RS13590	COG1546	Belongs to the CinA family
D0784_RS13615	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
D0784_RS13640	COG3501	Rhs element vgr protein
D0784_RS13680	COG2003	Belongs to the UPF0758 family
D0784_RS13705	COG2826	transposase and inactivated derivatives, IS30 family
D0784_RS13730	COG3335	DDE superfamily endonuclease
D0784_RS13735	COG0582	viral genome integration into host DNA
D0784_RS13745	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
D0784_RS13775	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
D0784_RS13785	COG0148	phosphopyruvate hydratase activity
D0784_RS13795	COG3956	TIGRFAM MazG family protein
D0784_RS13800	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
D0784_RS13825	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
D0784_RS13830	COG1381	Involved in DNA repair and RecF pathway recombination
D0784_RS13835	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
D0784_RS13855	COG3086	response to oxidative stress
D0784_RS13870	COG1595	DNA-templated transcription, initiation
D0784_RS13875	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
D0784_RS13885	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
D0784_RS13905	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
D0784_RS13910	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
D0784_RS13925	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
D0784_RS13935	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
D0784_RS13945	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
D0784_RS13955	COG0583	DNA-binding transcription factor activity
D0784_RS13970	COG0668	transmembrane transport
D0784_RS13975	COG0191	fructose-bisphosphate aldolase activity
D0784_RS13995	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
D0784_RS14015	COG2356	endonuclease I
D0784_RS14020	COG1385	rRNA (uridine-N3-)-methyltransferase activity
D0784_RS14025	COG0189	ligase activity
D0784_RS14030	COG1678	Uncharacterized ACR, COG1678
D0784_RS14035	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
D0784_RS14050	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
D0784_RS14055	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
D0784_RS14060	COG0762	integral membrane protein
D0784_RS14075	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
D0784_RS14080	COG0635	Involved in the biosynthesis of porphyrin-containing compound
D0784_RS14180	COG1012	belongs to the aldehyde dehydrogenase family
D0784_RS14235	COG3437	response regulator, receiver
D0784_RS14240	COG1609	Transcriptional regulator
D0784_RS14250	COG1486	melibiose metabolic process
D0784_RS14255	COG1447	Phosphotransferase system cellobiose-specific component IIA
D0784_RS14265	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
D0784_RS14270	COG0726	polysaccharide deacetylase
D0784_RS14285	COG1028	Short-chain dehydrogenase reductase Sdr
D0784_RS14295	COG0795	lipopolysaccharide-transporting ATPase activity
D0784_RS14300	COG0795	lipopolysaccharide-transporting ATPase activity
D0784_RS14310	COG2927	DNA polymerase III (CHI subunit)
D0784_RS14315	COG0525	valine-tRNA ligase activity
D0784_RS14325	COG0456	acetyltransferase
D0784_RS14365	COG0251	oxidation-reduction process
D0784_RS14370	COG0204	Acyl-transferase
D0784_RS14380	COG5007	Belongs to the BolA IbaG family
D0784_RS14390	COG2854	intermembrane phospholipid transfer
D0784_RS14395	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
D0784_RS14400	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
D0784_RS14405	COG1127	ABC transporter
D0784_RS14415	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
D0784_RS14415	COG0517	IMP dehydrogenase activity
D0784_RS14425	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
D0784_RS14430	COG1137	ATPase activity
D0784_RS14440	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
D0784_RS14445	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
D0784_RS14455	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
D0784_RS14460	COG2239	Acts as a magnesium transporter
D0784_RS14465	COG0312	modulator of DNA gyrase
D0784_RS14475	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
D0784_RS14480	COG0564	pseudouridine synthase activity
D0784_RS14495	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
D0784_RS14500	COG0312	modulator of DNA gyrase
D0784_RS14505	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
D0784_RS14510	COG3164	Protein of unknown function
D0784_RS14520	COG0424	maF-like protein
D0784_RS14525	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
D0784_RS14530	COG1792	Involved in formation and maintenance of cell shape
D0784_RS14535	COG1077	Cell shape determining protein MreB Mrl
D0784_RS14580	COG1459	type II secretion system
D0784_RS14585	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
D0784_RS14595	COG3409	Peptidoglycan-binding domain 1 protein
D0784_RS14595	COG3267	Type II secretory pathway component ExeA
D0784_RS14620	COG2200	EAL domain
D0784_RS14620	COG2199	diguanylate cyclase activity
D0784_RS14625	COG0629	single-stranded DNA binding
D0784_RS14640	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
D0784_RS14650	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
D0784_RS14660	COG0527	aspartate kinase activity
D0784_RS14665	COG0646	methionine synthase
D0784_RS14665	COG1410	methionine synthase
D0784_RS14740	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
D0784_RS14760	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
D0784_RS14765	COG0735	belongs to the Fur family
D0784_RS14780	COG0432	Pfam Uncharacterised protein family UPF0047
D0784_RS14790	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
D0784_RS14795	COG0305	Participates in initiation and elongation during chromosome replication
D0784_RS14815	COG2965	DNA replication, synthesis of RNA primer
D0784_RS14825	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
D0784_RS14830	COG0338	D12 class N6 adenine-specific DNA methyltransferase
D0784_RS14875	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
D0784_RS14885	COG0678	peroxiredoxin activity
D0784_RS14885	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
D0784_RS14890	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
D0784_RS14905	COG0165	Argininosuccinate lyase
D0784_RS14905	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
D0784_RS14920	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
D0784_RS14930	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
D0784_RS14940	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
D0784_RS14945	COG0527	aspartate kinase activity
D0784_RS14945	COG0460	homoserine dehydrogenase
D0784_RS14950	COG0626	cystathionine gamma-synthase activity
D0784_RS14960	COG0281	malic enzyme
D0784_RS14970	COG2906	2 iron, 2 sulfur cluster binding
D0784_RS14980	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
D0784_RS14995	COG2168	tRNA wobble position uridine thiolation
D0784_RS15000	COG2923	Belongs to the DsrF TusC family
D0784_RS15005	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
D0784_RS15010	COG2964	Protein conserved in bacteria
D0784_RS15015	COG0545	Peptidyl-prolyl cis-trans isomerase
D0784_RS15030	COG1446	asparaginase
D0784_RS15040	COG1047	Peptidyl-prolyl cis-trans
D0784_RS15055	COG2249	NAD(P)H dehydrogenase (quinone) activity
D0784_RS15065	COG0488	(ABC) transporter
D0784_RS15075	COG0429	hydrolase of the alpha beta-hydrolase fold
D0784_RS15085	COG3954	Phosphoribulokinase
D0784_RS15090	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
D0784_RS15110	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
D0784_RS15115	COG0512	Glutamine amidotransferase of anthranilate synthase
D0784_RS15130	COG0546	phosphoglycolate phosphatase activity
D0784_RS15135	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
D0784_RS15140	COG0557	exoribonuclease II activity
D0784_RS15150	COG1017	nitric oxide dioxygenase activity
D0784_RS15150	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
D0784_RS15155	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
D0784_RS15165	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
D0784_RS15170	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
D0784_RS15175	COG0330	HflC and HflK could
D0784_RS15180	COG0330	HflC and HflK could
D0784_RS15185	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
D0784_RS15200	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
D0784_RS15205	COG0860	N-Acetylmuramoyl-L-alanine amidase
D0784_RS15210	COG0802	atpase or kinase
D0784_RS15215	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
D0784_RS15290	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
D0784_RS15295	COG1162	GTPase activity
D0784_RS15305	COG0471	metal ion transport
D0784_RS15320	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
D0784_RS15325	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
D0784_RS15330	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
D0784_RS15340	COG1045	serine acetyltransferase
D0784_RS15345	COG4942	peptidase
D0784_RS15370	COG1053	succinate dehydrogenase
D0784_RS15375	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
D0784_RS15405	COG1509	lysine 2,3-aminomutase activity
D0784_RS15430	COG0534	Mate efflux family protein
D0784_RS15450	COG0745	RESPONSE REGULATOR receiver
D0784_RS15455	COG2205	protein histidine kinase activity
D0784_RS15465	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
D0784_RS15470	COG3030	protein affecting phage T7 exclusion by the F plasmid
D0784_RS15475	COG1027	Aspartate ammonia-lyase
D0784_RS15480	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
D0784_RS15485	COG4232	protein-disulfide reductase activity
D0784_RS15495	COG2095	MarC family integral membrane protein
D0784_RS15505	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
D0784_RS15525	COG2198	Histidine kinase
D0784_RS15525	COG2205	protein histidine kinase activity
D0784_RS15525	COG0784	Response regulator, receiver
D0784_RS15530	COG2814	Major facilitator Superfamily
D0784_RS15545	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
D0784_RS15550	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
D0784_RS15555	COG0511	ligase activity, forming carbon-carbon bonds
D0784_RS15560	COG0439	Biotin carboxylase
D0784_RS15575	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
D0784_RS15580	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
D0784_RS15585	COG2199	diguanylate cyclase activity
D0784_RS15630	COG1982	Orn Lys Arg decarboxylase major
D0784_RS15635	COG0531	amino acid
D0784_RS15645	COG3710	Transcriptional regulator
D0784_RS15650	COG0789	Transcriptional regulator
D0784_RS15660	COG0151	Belongs to the GarS family
D0784_RS15675	COG1253	flavin adenine dinucleotide binding
D0784_RS15680	COG3068	Protein conserved in bacteria
D0784_RS15690	COG1573	uracil-dna glycosylase
D0784_RS15710	COG2816	NAD+ diphosphatase activity
D0784_RS15715	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
D0784_RS15735	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
D0784_RS15750	COG0250	Participates in transcription elongation, termination and antitermination
D0784_RS15755	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
D0784_RS15800	COG0812	UDP-N-acetylmuramate dehydrogenase activity
D0784_RS15810	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
D0784_RS15910	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
D0784_RS15915	COG0534	Mate efflux family protein
D0784_RS15935	COG2937	Belongs to the GPAT DAPAT family
D0784_RS15945	COG3161	chorismate lyase activity
D0784_RS15950	COG1580	Controls the rotational direction of flagella during chemotaxis
D0784_RS15955	COG0705	Rhomboid family
D0784_RS15975	COG2177	Part of the ABC transporter FtsEX involved in
D0784_RS15980	COG2884	Cell division ATP-binding protein ftsE
D0784_RS15985	COG0552	protein localization to endoplasmic reticulum
D0784_RS15990	COG0742	ribosomal rna small subunit methyltransferase
D0784_RS16000	COG2095	MarC family integral membrane protein
D0784_RS16055	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
D0784_RS16060	COG0640	Transcriptional regulator
D0784_RS16065	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
D0784_RS16070	COG1280	lysine exporter protein (LysE YggA)
D0784_RS16075	COG2267	carboxylic ester hydrolase activity
D0784_RS16080	COG0561	phosphatase activity
D0784_RS16095	COG3148	PFAM DTW domain containing protein
D0784_RS16100	COG2199	diguanylate cyclase activity
D0784_RS16100	COG2200	EAL domain
D0784_RS16100	COG3287	FIST C domain
D0784_RS16105	COG1011	Hydrolase
D0784_RS16125	COG0019	diaminopimelate decarboxylase activity
D0784_RS16140	COG3072	Adenylate cyclase
D0784_RS16150	COG1587	Uroporphyrinogen-III synthase
D0784_RS16155	COG2959	enzyme of heme biosynthesis
D0784_RS16160	COG3071	HemY protein
D0784_RS16205	COG0633	Ferredoxin
D0784_RS16210	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
D0784_RS16225	COG3118	belongs to the thioredoxin family
D0784_RS16240	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
D0784_RS16255	COG0514	ATP-dependent DNA helicase (RecQ)
D0784_RS16260	COG2962	Rard protein
D0784_RS16280	COG1280	lysine exporter protein (LysE YggA)
D0784_RS16285	COG0405	Gamma-glutamyltransferase
D0784_RS16295	COG0210	DNA helicase
D0784_RS16305	COG3220	belongs to the UPF0276 family
D0784_RS16325	COG2814	Major facilitator Superfamily
D0784_RS16335	COG0006	proline dipeptidase activity
D0784_RS16335	COG0006	proline dipeptidase activity
D0784_RS16350	COG2104	thiamine diphosphate biosynthetic process
D0784_RS16355	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
D0784_RS16375	COG2132	Multicopper oxidase
D0784_RS16420	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
D0784_RS16445	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
D0784_RS16450	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
D0784_RS16455	COG0551	DNA topoisomerase type I activity
D0784_RS16465	COG0758	DNA mediated transformation
D0784_RS16475	COG0242	peptide deformylase activity
D0784_RS16485	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
D0784_RS16485	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
D0784_RS16490	COG0569	domain protein
D0784_RS16495	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
D0784_RS16505	COG1272	protein, Hemolysin III
D0784_RS16510	COG4326	sporulation control protein
D0784_RS16520	COG3084	Protein conserved in bacteria
D0784_RS16530	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
D0784_RS16535	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
D0784_RS16540	COG0204	Acyl-transferase
D0784_RS16550	COG2199	diguanylate cyclase activity
D0784_RS16640	COG3978	acetolactate synthase activity
D0784_RS16645	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
D0784_RS16650	COG0129	dihydroxy-acid dehydratase activity
D0784_RS16660	COG0583	DNA-binding transcription factor activity
D0784_RS16665	COG2814	Major facilitator Superfamily
D0784_RS16670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D0784_RS16675	COG0765	amino acid transport
D0784_RS16685	COG0355	proton-transporting ATP synthase activity, rotational mechanism
D0784_RS16695	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
D0784_RS16725	COG3312	ion transport
D0784_RS16730	COG1475	DNA binding
D0784_RS16735	COG1192	Involved in chromosome partitioning
D0784_RS16750	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
D0784_RS16780	COG1126	abc transporter atp-binding protein
D0784_RS16820	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
D0784_RS16825	COG1263	PTS System
D0784_RS16825	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D0784_RS16830	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
D0784_RS16845	COG4166	transmembrane transport
D0784_RS16985	COG1132	(ABC) transporter
D0784_RS17020	COG0800	Aldolase
D0784_RS17025	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D0784_RS17030	COG1904	glucuronate isomerase
D0784_RS17035	COG0246	Mannitol dehydrogenase
D0784_RS17045	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
D0784_RS17055	COG2186	Transcriptional regulator
D0784_RS17060	COG1312	Catalyzes the dehydration of D-mannonate
D0784_RS17080	COG0513	Belongs to the DEAD box helicase family
D0784_RS17085	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
D0784_RS17090	COG1757	Na H antiporter
D0784_RS17095	COG1609	Transcriptional regulator
D0784_RS17100	COG2258	MOSC domain
D0784_RS17115	COG0544	peptidyl-prolyl cis-trans isomerase activity
D0784_RS17120	COG1522	sequence-specific DNA binding
D0784_RS17130	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
D0784_RS17150	COG1349	DNA-binding transcription factor activity
D0784_RS17155	COG2084	Dehydrogenase
D0784_RS17160	COG3395	kinase activity
D0784_RS17165	COG0235	Class ii aldolase
D0784_RS17170	COG3622	Belongs to the hyi family
D0784_RS17175	COG2610	gluconate transmembrane transporter activity
D0784_RS17220	COG3634	alkyl hydroperoxide reductase activity
D0784_RS17230	COG1846	Transcriptional regulator
D0784_RS17235	COG1764	response to oxidative stress
D0784_RS17270	COG0577	efflux transmembrane transporter activity
D0784_RS17275	COG1136	(ABC) transporter
D0784_RS17280	COG1335	isochorismatase
D0784_RS17295	COG0463	Glycosyl transferase, family 2
D0784_RS17320	COG0826	peptidase U32
D0784_RS17330	COG0840	transmembrane signaling receptor activity
D0784_RS17335	COG0612	Peptidase, M16
D0784_RS17360	COG2188	Transcriptional regulator
D0784_RS17370	COG1263	PTS System
D0784_RS17370	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
D0784_RS17370	COG2190	(PTS) system
D0784_RS17375	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D0784_RS17380	COG0800	Aldolase
D0784_RS17395	COG0739	heme binding
D0784_RS17410	COG2814	Major facilitator Superfamily
D0784_RS17420	COG1609	Transcriptional regulator
D0784_RS17445	COG1760	l-serine dehydratase
D0784_RS17455	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
D0784_RS17470	COG1648	precorrin-2 dehydrogenase activity
D0784_RS17470	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
D0784_RS17480	COG2203	Gaf domain
D0784_RS17480	COG3706	GGDEF domain
D0784_RS17480	COG4251	negative regulation of phosphorylation
D0784_RS17480	COG5001	Diguanylate cyclase
D0784_RS17490	COG4580	involved in the transport of maltose and maltodextrins
D0784_RS17510	COG2356	endonuclease I
D0784_RS17530	COG1982	Orn Lys Arg decarboxylase major
D0784_RS17535	COG0531	amino acid
D0784_RS17555	COG3385	transposase activity
D0784_RS17560	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
D0784_RS17565	COG1162	GTPase activity
D0784_RS17580	COG1999	signal sequence binding
D0784_RS17605	COG0058	SHG alpha-glucan phosphorylase activity
D0784_RS17610	COG1640	4-alpha-glucanotransferase
D0784_RS17615	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
D0784_RS17620	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
D0784_RS17625	COG0366	Alpha amylase catalytic
D0784_RS17640	COG3366	ferrous iron transmembrane transporter activity
D0784_RS17645	COG0700	Nucleoside recognition
D0784_RS17650	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
D0784_RS17655	COG3339	Conserved Protein
D0784_RS17660	COG1301	dicarboxylic acid transport
D0784_RS17720	COG2095	MarC family integral membrane protein
D0784_RS17725	COG4667	esterase of the alpha-beta hydrolase superfamily
D0784_RS17735	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
D0784_RS17740	COG0415	Belongs to the DNA photolyase family
D0784_RS17765	COG1686	Belongs to the peptidase S11 family
D0784_RS17775	COG0583	DNA-binding transcription factor activity
D0784_RS17780	COG4628	conserved protein (DUF2132)
D0784_RS17790	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
D0784_RS17805	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
D0784_RS17810	COG0628	permease
D0784_RS17850	COG2988	succinylglutamate desuccinylase activity
D0784_RS17860	COG2814	Major facilitator Superfamily
D0784_RS17870	COG0454	-acetyltransferase
D0784_RS17880	COG0745	RESPONSE REGULATOR receiver
D0784_RS17885	COG2205	protein histidine kinase activity
D0784_RS17900	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
D0784_RS17905	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
D0784_RS17910	COG1882	Formate acetyltransferase
D0784_RS17950	COG0251	oxidation-reduction process
D0784_RS17960	COG1294	oxidase, subunit
D0784_RS17965	COG1271	oxidase subunit
D0784_RS17980	COG3220	belongs to the UPF0276 family
D0784_RS17995	COG0384	phenazine biosynthesis protein PhzF
D0784_RS18000	COG0346	lactoylglutathione lyase activity
D0784_RS18015	COG0488	(ABC) transporter
D0784_RS18020	COG4628	conserved protein (DUF2132)
D0784_RS18035	COG0583	DNA-binding transcription factor activity
D0784_RS18050	COG3537	Alpha-1,2-mannosidase
D0784_RS18055	COG3537	Alpha-1,2-mannosidase
D0784_RS18065	COG3537	Alpha-1,2-mannosidase
D0784_RS18070	COG3537	Alpha-1,2-mannosidase
D0784_RS18075	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D0784_RS18085	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
D0784_RS18085	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
D0784_RS18090	COG0346	lactoylglutathione lyase activity
D0784_RS18095	COG1349	DNA-binding transcription factor activity
D0784_RS18110	COG0753	catalase activity
D0784_RS18125	COG1335	isochorismatase
D0784_RS18160	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
D0784_RS18170	COG0583	DNA-binding transcription factor activity
D0784_RS18175	COG0589	response to stress
D0784_RS18180	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
D0784_RS18195	COG4175	Glycine betaine
D0784_RS18195	COG3448	diguanylate cyclase activity
D0784_RS18200	COG4176	ABC-type proline glycine betaine transport system permease component
D0784_RS18210	COG1342	Belongs to the UPF0251 family
D0784_RS18240	COG4948	Mandelate Racemase Muconate Lactonizing
D0784_RS18280	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
D0784_RS18290	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D0784_RS18325	COG0318	PFAM AMP-dependent synthetase and ligase
D0784_RS18330	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
D0784_RS18360	COG0786	glutamate:sodium symporter activity
D0784_RS18365	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
D0784_RS18375	COG1538	Outer membrane efflux protein
D0784_RS18385	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D0784_RS18390	COG0583	DNA-binding transcription factor activity
D0784_RS18425	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
D0784_RS18430	COG2197	response regulator
D0784_RS18440	COG0574	Belongs to the PEP-utilizing enzyme family
D0784_RS18440	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
D0784_RS18450	COG0252	asparaginase activity
D0784_RS18465	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
D0784_RS18470	COG0583	DNA-binding transcription factor activity
D0784_RS18480	COG2321	neutral zinc metallopeptidase
D0784_RS18485	COG3122	Protein conserved in bacteria
D0784_RS18500	COG2255	four-way junction helicase activity
D0784_RS18510	COG3853	Toxic anion resistance protein (TelA)
D0784_RS18520	COG1902	pentaerythritol trinitrate reductase activity
D0784_RS18540	COG0583	DNA-binding transcription factor activity
D0784_RS18550	COG3501	Rhs element vgr protein
D0784_RS18565	COG1262	PFAM Formylglycine-generating sulfatase enzyme
D0784_RS18565	COG0515	serine threonine protein kinase
D0784_RS18570	COG0513	Belongs to the DEAD box helicase family
D0784_RS18615	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D0784_RS18640	COG3746	phosphate-selective porin O and P
D0784_RS18665	COG1028	Short-chain dehydrogenase reductase Sdr
D0784_RS18715	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
D0784_RS18735	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
D0784_RS18745	COG0625	glutathione transferase activity
D0784_RS18750	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
D0784_RS18755	COG1686	Belongs to the peptidase S11 family
D0784_RS18765	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
D0784_RS18795	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
D0784_RS18810	COG1278	Cold shock
D0784_RS18815	COG1741	Belongs to the pirin family
D0784_RS18820	COG4667	esterase of the alpha-beta hydrolase superfamily
D0784_RS18830	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
D0784_RS18840	COG0523	cobalamin synthesis protein
D0784_RS18865	COG3842	ATPase activity
D0784_RS18870	COG0395	ABC-type sugar transport system, permease component
D0784_RS18875	COG1175	transmembrane transport
D0784_RS18885	COG0584	glycerophosphoryl diester phosphodiesterase
D0784_RS18895	COG0589	response to stress
D0784_RS18905	COG0488	(ABC) transporter
D0784_RS18910	COG1505	serine-type exopeptidase activity
D0784_RS18915	COG2067	long-chain fatty acid transport protein
D0784_RS18925	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D0784_RS18935	COG1858	cytochrome C peroxidase
D0784_RS18950	COG0494	nUDIX hydrolase
D0784_RS18995	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
D0784_RS19015	COG3383	formate dehydrogenase (NAD+) activity
D0784_RS19035	COG0842	Transport permease protein
D0784_RS19040	COG1131	(ABC) transporter
D0784_RS19050	COG0840	transmembrane signaling receptor activity
D0784_RS19065	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
D0784_RS19075	COG4145	pantothenate transmembrane transporter activity
D0784_RS19080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D0784_RS19085	COG0800	Aldolase
D0784_RS19095	COG2706	6-phosphogluconolactonase activity
D0784_RS19105	COG1881	PFAM PEBP family protein
D0784_RS19120	COG0798	PFAM Bile acid sodium symporter
D0784_RS19135	COG1733	regulation of RNA biosynthetic process
D0784_RS19150	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
D0784_RS19155	COG2213	PTS system mannitol-specific
D0784_RS19160	COG1063	alcohol dehydrogenase
D0784_RS19170	COG1072	(Pantothenic acid kinase))
D0784_RS19175	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
D0784_RS19195	COG0814	amino acid
D0784_RS19210	COG3314	Sporulation integral membrane protein YlbJ
D0784_RS19235	COG0739	heme binding
D0784_RS19240	COG5001	Diguanylate cyclase
D0784_RS19245	COG0583	DNA-binding transcription factor activity
D0784_RS19250	COG2814	Major facilitator Superfamily
D0784_RS19270	COG0697	spore germination
D0784_RS19285	COG0179	Fumarylacetoacetate (FAA) hydrolase
D0784_RS19305	COG1280	lysine exporter protein (LysE YggA)
D0784_RS19315	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
D0784_RS19325	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
D0784_RS19330	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
D0784_RS19355	COG1612	heme a metabolic process
D0784_RS19370	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
D0784_RS19375	COG2814	Major facilitator Superfamily
D0784_RS19380	COG0840	transmembrane signaling receptor activity
D0784_RS19385	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
D0784_RS19415	COG2897	thiosulfate sulfurtransferase activity
D0784_RS19470	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
D0784_RS19515	COG4989	oxidoreductase activity
D0784_RS19530	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
D0784_RS19530	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
D0784_RS19550	COG1073	alpha beta
D0784_RS19555	COG0583	DNA-binding transcription factor activity
D0784_RS19575	COG4964	Belongs to the GSP D family
D0784_RS19585	COG0455	bacterial-type flagellum organization
D0784_RS19625	COG2885	chlorophyll binding
D0784_RS19635	COG0402	S-adenosylhomocysteine deaminase activity
D0784_RS19645	COG3706	GGDEF domain
D0784_RS19670	COG4176	ABC-type proline glycine betaine transport system permease component
D0784_RS19675	COG4175	Glycine betaine
D0784_RS19675	COG0517	IMP dehydrogenase activity
D0784_RS19685	COG0330	HflC and HflK could
D0784_RS19700	COG5001	Diguanylate cyclase
D0784_RS19700	COG4251	negative regulation of phosphorylation
D0784_RS19700	COG3706	GGDEF domain
D0784_RS19700	COG2203	Gaf domain
D0784_RS19715	COG2205	protein histidine kinase activity
D0784_RS19715	COG0784	Response regulator, receiver
D0784_RS19760	COG0586	Pfam SNARE associated Golgi protein
D0784_RS19785	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
D0784_RS19790	COG5001	Diguanylate cyclase
D0784_RS19800	COG1129	ABC transporter
D0784_RS19805	COG1172	Belongs to the binding-protein-dependent transport system permease family
D0784_RS19810	COG1879	ABC-type sugar transport system periplasmic component
D0784_RS19815	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D0784_RS19820	COG1609	Transcriptional regulator
D0784_RS19835	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
D0784_RS19850	COG4607	ABC-type enterochelin transport system periplasmic component
D0784_RS19855	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D0784_RS19860	COG4605	iron ion homeostasis
D0784_RS19865	COG4604	ABC transporter, ATP-binding protein
D0784_RS19870	COG0789	Transcriptional regulator
D0784_RS19895	COG1289	transmembrane transporter activity
D0784_RS19900	COG0210	DNA helicase
D0784_RS19910	COG1879	ABC-type sugar transport system periplasmic component
D0784_RS19915	COG2198	Histidine kinase
D0784_RS19915	COG2205	protein histidine kinase activity
D0784_RS19915	COG0784	Response regulator, receiver
D0784_RS19945	COG3119	arylsulfatase activity
D0784_RS19950	COG3119	arylsulfatase activity
D0784_RS19955	COG3063	Type IV pilus biogenesis stability protein PilW
D0784_RS19960	COG0714	Associated with various cellular activities
D0784_RS20020	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
D0784_RS20030	COG0355	proton-transporting ATP synthase activity, rotational mechanism
D0784_RS20040	COG0583	DNA-binding transcription factor activity
D0784_RS20045	COG1597	lipid kinase activity
D0784_RS20050	COG3111	PFAM Bacterial OB fold (BOF) protein
D0784_RS20070	COG0641	radical SAM
D0784_RS20095	COG0501	Belongs to the peptidase M48B family
D0784_RS20100	COG1704	LemA family
D0784_RS20105	COG3069	C4-dicarboxylate transmembrane transporter activity
D0784_RS20135	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
D0784_RS20140	COG0739	heme binding
D0784_RS20180	COG3501	Rhs element vgr protein
D0784_RS20205	COG0515	serine threonine protein kinase
D0784_RS20240	COG1522	sequence-specific DNA binding
D0784_RS20310	COG4771	TonB-dependent receptor
D0784_RS20325	COG3706	GGDEF domain
D0784_RS20335	COG2197	response regulator
D0784_RS20340	COG0778	Nitroreductase
D0784_RS20345	COG0784	Response regulator, receiver
D0784_RS20345	COG0835	chemotaxis
D0784_RS20350	COG2165	general secretion pathway protein
D0784_RS20360	COG2962	Rard protein
D0784_RS20380	COG0671	phosphoesterase, PA-phosphatase related
D0784_RS20435	COG2067	long-chain fatty acid transport protein
D0784_RS20440	COG1234	tRNA 3'-trailer cleavage
D0784_RS20455	COG5642	Protein of unknown function (DUF2384)
D0784_RS20465	COG2755	lipolytic protein G-D-S-L family
D0784_RS20465	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
D0784_RS20475	COG1902	pentaerythritol trinitrate reductase activity
D0784_RS20480	COG0346	lactoylglutathione lyase activity
D0784_RS20515	COG2815	serine threonine protein kinase
D0784_RS20515	COG0515	serine threonine protein kinase
D0784_RS20550	COG0631	protein serine/threonine phosphatase activity
D0784_RS20620	COG3209	COG3209 Rhs family protein
D0784_RS20640	COG0420	3'-5' exonuclease activity
D0784_RS20645	COG0419	ATPase involved in DNA repair
D0784_RS20655	COG3469	chitinase activity
D0784_RS20685	COG3040	lipid binding
D0784_RS20695	COG2814	Major facilitator Superfamily
D0784_RS20705	COG1288	antiporter activity
D0784_RS20715	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
D0784_RS20730	COG2425	protein containing a von Willebrand factor type A (vWA) domain
D0784_RS20740	COG1472	Belongs to the glycosyl hydrolase 3 family
D0784_RS20745	COG0583	DNA-binding transcription factor activity
D0784_RS20750	COG0277	FAD linked oxidase domain protein
D0784_RS20835	COG2199	diguanylate cyclase activity
D0784_RS20845	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
D0784_RS20855	COG2116	formate transmembrane transporter activity
D0784_RS20875	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
D0784_RS20905	COG0534	Mate efflux family protein
D0784_RS20910	COG2205	protein histidine kinase activity
D0784_RS20910	COG0745	RESPONSE REGULATOR receiver
D0784_RS20910	COG3292	Two component regulator propeller
D0784_RS20920	COG3118	belongs to the thioredoxin family
D0784_RS20925	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
D0784_RS20950	COG1566	PFAM secretion protein HlyD family protein
D0784_RS20960	COG0628	permease
D0784_RS20970	COG1482	cell wall glycoprotein biosynthetic process
D0784_RS20975	COG2271	Major facilitator Superfamily
D0784_RS20980	COG3851	Histidine kinase
D0784_RS20985	COG2197	response regulator
D0784_RS21050	COG1328	CTP reductase activity
D0784_RS21055	COG0602	queuosine metabolic process
D0784_RS21060	COG0534	Mate efflux family protein
D0784_RS21085	COG3111	PFAM Bacterial OB fold (BOF) protein
D0784_RS21095	COG0725	ABC transporter, periplasmic molybdate-binding protein
D0784_RS21100	COG4149	molybdate abc transporter
D0784_RS21105	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
D0784_RS21115	COG3706	GGDEF domain
D0784_RS21115	COG2203	Gaf domain
D0784_RS21115	COG5001	Diguanylate cyclase
D0784_RS21115	COG4251	negative regulation of phosphorylation
D0784_RS21135	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
D0784_RS21140	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
D0784_RS21165	COG3140	Belongs to the UPF0181 family
D0784_RS21235	COG2801	Transposase and inactivated derivatives
D0784_RS21240	COG0023	Translation Initiation Factor
D0784_RS21260	COG0045	succinate-CoA ligase (ADP-forming) activity
D0784_RS21260	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D0784_RS21260	COG1042	CoA-binding domain protein
D0784_RS21265	COG0583	DNA-binding transcription factor activity
D0784_RS21280	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
D0784_RS21285	COG3447	MASE1 domain protein
D0784_RS21285	COG5002	protein histidine kinase activity
D0784_RS21285	COG5001	Diguanylate cyclase
D0784_RS21295	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
D0784_RS21300	COG1984	allophanate hydrolase subunit 2
D0784_RS21310	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
D0784_RS21315	COG4181	ATPase activity
D0784_RS21325	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
D0784_RS21330	COG3300	MHYT domain
D0784_RS21330	COG5001	Diguanylate cyclase
D0784_RS21340	COG0484	heat shock protein binding
D0784_RS21375	COG2050	protein possibly involved in aromatic compounds catabolism
D0784_RS21380	COG0501	Belongs to the peptidase M48B family
D0784_RS21390	COG2067	long-chain fatty acid transport protein
D0784_RS21395	COG2267	carboxylic ester hydrolase activity
D0784_RS21410	COG0646	methionine synthase
D0784_RS21410	COG1410	methionine synthase
D0784_RS21425	COG0737	Belongs to the 5'-nucleotidase family
D0784_RS21430	COG3593	DNA synthesis involved in DNA repair
D0784_RS21440	COG0583	DNA-binding transcription factor activity
D0784_RS21450	COG2116	formate transmembrane transporter activity
D0784_RS21460	COG3038	cytochrome b561
D0784_RS21475	COG4943	cyclic-guanylate-specific phosphodiesterase activity
D0784_RS21480	COG0513	Belongs to the DEAD box helicase family
D0784_RS21485	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
D0784_RS21500	COG0546	phosphoglycolate phosphatase activity
D0784_RS21505	COG0784	Response regulator, receiver
D0784_RS21505	COG3437	response regulator, receiver
D0784_RS21520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
D0784_RS21530	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
D0784_RS21545	COG2207	Transcriptional regulator
D0784_RS21550	COG1979	alcohol dehydrogenase
D0784_RS21560	COG1126	abc transporter atp-binding protein
D0784_RS21565	COG0765	amino acid transport
D0784_RS21570	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D0784_RS21575	COG0765	amino acid transport
D0784_RS21580	COG2203	Gaf domain
D0784_RS21580	COG2199	diguanylate cyclase activity
D0784_RS21580	COG2200	EAL domain
D0784_RS21595	COG1609	Transcriptional regulator
D0784_RS21600	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
D0784_RS21600	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
D0784_RS21605	COG1105	Belongs to the carbohydrate kinase PfkB family
D0784_RS21610	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
D0784_RS21610	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D0784_RS21610	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D0784_RS21625	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D0784_RS21630	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
D0784_RS21640	COG0404	The glycine cleavage system catalyzes the degradation of glycine
D0784_RS21650	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
D0784_RS21720	COG4977	sequence-specific DNA binding
D0784_RS21730	COG1733	regulation of RNA biosynthetic process
D0784_RS21740	COG0641	radical SAM
D0784_RS21745	COG3119	arylsulfatase activity
D0784_RS21750	COG3119	arylsulfatase activity
D0784_RS21775	COG0583	DNA-binding transcription factor activity
D0784_RS21805	COG5640	endopeptidase activity
D0784_RS21815	COG1132	(ABC) transporter
D0784_RS21845	COG2816	NAD+ diphosphatase activity
D0784_RS21860	COG2814	Major facilitator Superfamily
D0784_RS21955	COG0628	permease
D0784_RS21985	COG0739	heme binding
D0784_RS21995	COG1902	pentaerythritol trinitrate reductase activity
D0784_RS22005	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
D0784_RS22040	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
D0784_RS22040	COG2146	nitrite reductase [NAD(P)H] activity
D0784_RS22045	COG1116	anion transmembrane transporter activity
D0784_RS22050	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D0784_RS22055	COG1116	anion transmembrane transporter activity
D0784_RS22055	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D0784_RS22065	COG3707	response regulator
D0784_RS22085	COG0243	molybdopterin cofactor binding
D0784_RS22095	COG5001	Diguanylate cyclase
D0784_RS22095	COG5002	protein histidine kinase activity
D0784_RS22100	COG0814	amino acid
D0784_RS22130	COG1785	Belongs to the alkaline phosphatase family
D0784_RS22145	COG0745	RESPONSE REGULATOR receiver
D0784_RS22185	COG0443	Heat shock 70 kDa protein
D0784_RS22230	COG2200	EAL domain
D0784_RS22255	COG4160	amino acid transport
D0784_RS22260	COG4215	(ABC) transporter
D0784_RS22265	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
D0784_RS22270	COG1126	abc transporter atp-binding protein
D0784_RS22325	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
D0784_RS22335	COG1012	belongs to the aldehyde dehydrogenase family
D0784_RS22350	COG0446	pyridine nucleotide-disulphide oxidoreductase
D0784_RS22350	COG1902	pentaerythritol trinitrate reductase activity
D0784_RS22360	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
D0784_RS22365	COG1845	cytochrome c oxidase, subunit III
D0784_RS22370	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
D0784_RS22375	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
D0784_RS22380	COG1028	Short-chain dehydrogenase reductase Sdr
D0784_RS22390	COG1024	Enoyl-CoA hydratase
D0784_RS22395	COG1024	Enoyl-CoA hydratase
D0784_RS22410	COG0183	Belongs to the thiolase family
D0784_RS22420	COG1960	acyl-CoA dehydrogenase activity
D0784_RS22425	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
D0784_RS22430	COG1024	Enoyl-CoA hydratase
D0784_RS22470	COG3278	Belongs to the heme-copper respiratory oxidase family
D0784_RS22490	COG1752	Esterase of the alpha-beta hydrolase superfamily
D0784_RS22500	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
D0784_RS22520	COG3550	peptidyl-serine autophosphorylation
D0784_RS22525	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
D0784_RS22530	COG1484	DNA-dependent DNA replication
D0784_RS22535	COG4584	PFAM Integrase catalytic
D0784_RS22600	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
D0784_RS22605	COG0840	transmembrane signaling receptor activity
D0784_RS22610	COG4580	involved in the transport of maltose and maltodextrins
D0784_RS22615	COG1874	Beta-galactosidase
D0784_RS22625	COG3833	ABC-type maltose transport systems, permease component
D0784_RS22630	COG1175	transmembrane transport
D0784_RS22635	COG2182	Extracellular solute-binding protein
D0784_RS22645	COG1609	Transcriptional regulator
D0784_RS22715	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
D0784_RS22730	COG0513	Belongs to the DEAD box helicase family
D0784_RS22735	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
D0784_RS22750	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
D0784_RS22765	COG1119	ATPase activity
D0784_RS22770	COG2200	EAL domain
D0784_RS22790	COG0513	Belongs to the DEAD box helicase family
D0784_RS22795	COG5001	Diguanylate cyclase
D0784_RS22795	COG3447	MASE1 domain protein
D0784_RS22795	COG5002	protein histidine kinase activity
D0784_RS22800	COG0523	cobalamin synthesis protein
D0784_RS22835	COG3530	Putative quorum-sensing-regulated virulence factor
D0784_RS22870	COG3186	Phenylalanine-4-hydroxylase
D0784_RS22880	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
D0784_RS22885	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
D0784_RS22905	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
D0784_RS22910	COG1454	alcohol dehydrogenase
D0784_RS22915	COG2133	pyrroloquinoline quinone binding
D0784_RS22920	COG1619	proteins homologs of microcin C7 resistance protein MccF
D0784_RS22930	COG0783	Belongs to the Dps family
D0784_RS22935	COG0840	transmembrane signaling receptor activity
D0784_RS22945	COG1136	(ABC) transporter
D0784_RS22945	COG0577	efflux transmembrane transporter activity
D0784_RS22965	COG2199	diguanylate cyclase activity
D0784_RS22975	COG3036	rescue of stalled ribosome
D0784_RS22980	COG1278	Cold shock
D0784_RS23010	COG0545	Peptidyl-prolyl cis-trans isomerase
D0784_RS23015	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
D0784_RS23025	COG0840	transmembrane signaling receptor activity
D0784_RS23050	COG2195	Cleaves the N-terminal amino acid of tripeptides
D0784_RS23065	COG2197	response regulator
D0784_RS23070	COG3850	Histidine kinase
D0784_RS23095	COG3005	denitrification pathway
D0784_RS23115	COG0183	Belongs to the thiolase family
D0784_RS23125	COG1280	lysine exporter protein (LysE YggA)
D0784_RS23135	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
D0784_RS23140	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
D0784_RS23220	COG0673	inositol 2-dehydrogenase activity
D0784_RS23225	COG5002	protein histidine kinase activity
D0784_RS23225	COG2205	protein histidine kinase activity
D0784_RS23225	COG0784	Response regulator, receiver
D0784_RS23250	COG0583	DNA-binding transcription factor activity
D0784_RS23265	COG0531	amino acid
D0784_RS23270	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D0784_RS23280	COG2205	protein histidine kinase activity
D0784_RS23285	COG0745	RESPONSE REGULATOR receiver
D0784_RS23310	COG1566	PFAM secretion protein HlyD family protein
D0784_RS23315	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
D0784_RS23320	COG2239	Acts as a magnesium transporter
D0784_RS23325	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
D0784_RS23330	COG0402	S-adenosylhomocysteine deaminase activity
D0784_RS23345	COG1418	mRNA catabolic process
D0784_RS23360	COG2814	Major facilitator Superfamily
D0784_RS23370	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
D0784_RS23390	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
D0784_RS23405	COG4221	oxidoreductase activity
D0784_RS23410	COG0745	RESPONSE REGULATOR receiver
D0784_RS23415	COG2205	protein histidine kinase activity
D0784_RS23425	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
D0784_RS23430	COG2194	sulfuric ester hydrolase activity
D0784_RS23445	COG4977	sequence-specific DNA binding
D0784_RS23460	COG2814	Major facilitator Superfamily
D0784_RS23480	COG0583	DNA-binding transcription factor activity
D0784_RS23485	COG2249	NAD(P)H dehydrogenase (quinone) activity
D0784_RS23500	COG0583	DNA-binding transcription factor activity
D0784_RS23540	COG0366	Alpha amylase catalytic
D0784_RS23545	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
D0784_RS23550	COG0784	Response regulator, receiver
D0784_RS23550	COG0835	chemotaxis
D0784_RS23565	COG0748	coenzyme F420 binding
D0784_RS23570	COG3721	Heme iron utilization protein
D0784_RS23580	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
D0784_RS23585	COG0811	peptide transport
D0784_RS23590	COG0848	biopolymer transport protein
D0784_RS23600	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D0784_RS23605	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
D0784_RS23645	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
D0784_RS23655	COG3217	Mosc domain protein beta barrel domain protein
D0784_RS23655	COG0633	Ferredoxin
D0784_RS23655	COG3217	Mosc domain protein beta barrel domain protein
D0784_RS23655	COG0633	Ferredoxin
D0784_RS23660	COG0401	homolog of Blt101
D0784_RS23675	COG2354	Protein conserved in bacteria
D0784_RS23705	COG3833	ABC-type maltose transport systems, permease component
D0784_RS23710	COG1175	transmembrane transport
D0784_RS23725	COG3842	ATPase activity
D0784_RS23735	COG2200	EAL domain
D0784_RS23740	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
D0784_RS23755	COG0489	protein tyrosine kinase activity
D0784_RS23755	COG3206	protein involved in exopolysaccharide biosynthesis
D0784_RS23800	COG1309	transcriptional regulator
D0784_RS23805	COG2130	NADP-dependent
D0784_RS23815	COG0753	catalase activity
D0784_RS23820	COG2084	Dehydrogenase
D0784_RS23830	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D0784_RS23835	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D0784_RS23845	COG2207	Transcriptional regulator
D0784_RS23850	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
D0784_RS23850	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D0784_RS23850	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
D0784_RS23895	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
D0784_RS23900	COG1301	dicarboxylic acid transport
D0784_RS23905	COG1252	NADH dehydrogenase
D0784_RS23915	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
D0784_RS23920	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
D0784_RS23970	COG1028	Short-chain dehydrogenase reductase Sdr
D0784_RS23975	COG4191	Histidine kinase
D0784_RS23980	COG2204	response regulator
D0784_RS23985	COG0110	maltose O-acetyltransferase activity
D0784_RS24010	COG2197	response regulator
D0784_RS24040	COG0714	Associated with various cellular activities
D0784_RS24060	COG2304	oxidoreductase activity
D0784_RS24075	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
D0784_RS24080	COG0581	inorganic phosphate transmembrane transporter activity
D0784_RS24085	COG0573	inorganic phosphate transmembrane transporter activity
D0784_RS24095	COG0840	transmembrane signaling receptor activity
D0784_RS24115	COG4771	TonB-dependent receptor
D0784_RS24120	COG1770	oligopeptidase
D0784_RS24125	COG0513	Belongs to the DEAD box helicase family
D0784_RS24135	COG1376	ErfK ybiS ycfS ynhG family protein
D0784_RS24135	COG1388	LysM domain
D0784_RS24140	COG0415	Belongs to the DNA photolyase family
D0784_RS24145	COG0789	Transcriptional regulator
D0784_RS24150	COG3272	Protein of unknown function (DUF1722)
D0784_RS24160	COG0813	purine-nucleoside phosphorylase activity
D0784_RS24190	COG1566	PFAM secretion protein HlyD family protein
D0784_RS24200	COG1122	ATPase activity
D0784_RS24230	COG0348	domain, Protein
D0784_RS24235	COG0437	4 iron, 4 sulfur cluster binding
D0784_RS24240	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
D0784_RS24260	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
D0784_RS24270	COG1067	ATP-dependent peptidase activity
D0784_RS24280	COG4172	Belongs to the ABC transporter superfamily
D0784_RS24285	COG1505	serine-type exopeptidase activity
D0784_RS24290	COG0583	DNA-binding transcription factor activity
D0784_RS24295	COG1620	l-lactate permease
D0784_RS24300	COG1304	FMN binding
D0784_RS24310	COG0668	transmembrane transport
D0784_RS24320	COG1063	alcohol dehydrogenase
D0784_RS24325	COG2223	nitrite transmembrane transporter activity
D0784_RS24330	COG2199	diguanylate cyclase activity
D0784_RS24345	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
D0784_RS24370	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
D0784_RS24400	COG1063	alcohol dehydrogenase
D0784_RS24405	COG0156	8-amino-7-oxononanoate synthase activity
D0784_RS24430	COG0745	RESPONSE REGULATOR receiver
D0784_RS24455	COG0346	lactoylglutathione lyase activity
D0784_RS24520	COG2200	EAL domain
D0784_RS24580	COG1987	bacterial-type flagellum assembly
D0784_RS24590	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
D0784_RS24605	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D0784_RS24615	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
D0784_RS24620	COG1516	flagellar protein fliS
D0784_RS24635	COG1580	Controls the rotational direction of flagella during chemotaxis
D0784_RS24640	COG1191	sigma factor activity
D0784_RS24645	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
D0784_RS24650	COG1360	Flagellar Motor Protein
D0784_RS24675	COG0384	phenazine biosynthesis protein PhzF
D0784_RS24745	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
D0784_RS24750	COG1256	bacterial-type flagellum assembly
D0784_RS24750	COG4786	Flagellar basal body rod
D0784_RS24760	COG1706	bacterial-type flagellum-dependent cell motility
D0784_RS24765	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
D0784_RS24770	COG4786	Flagellar basal body rod
D0784_RS24775	COG4787	bacterial-type flagellum-dependent cell motility
D0784_RS24780	COG1749	Flagellar hook protein flgE
D0784_RS24785	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
D0784_RS24790	COG1558	bacterial-type flagellum-dependent cell motility
D0784_RS24795	COG1815	bacterial-type flagellum-dependent cell motility
D0784_RS24815	COG1388	LysM domain
D0784_RS24815	COG0741	lytic transglycosylase activity
D0784_RS24840	COG1760	l-serine dehydratase
D0784_RS24845	COG3104	oligopeptide transport
D0784_RS24870	COG0583	DNA-binding transcription factor activity
D0784_RS24880	COG2866	Carboxypeptidase
D0784_RS24885	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
D0784_RS24895	COG2990	Protein conserved in bacteria
D0784_RS24920	COG3842	ATPase activity
D0784_RS24925	COG1840	ABC-type Fe3 transport system, periplasmic component
D0784_RS24935	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
D0784_RS24955	COG3240	lipase activity
D0784_RS24980	COG1011	Hydrolase
D0784_RS25015	COG1765	OsmC-like protein
D0784_RS25020	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
D0784_RS25020	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
D0784_RS25035	COG3046	protein related to deoxyribodipyrimidine photolyase
D0784_RS25040	COG0415	Belongs to the DNA photolyase family
D0784_RS25045	COG3706	GGDEF domain
D0784_RS25080	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
D0784_RS25085	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
D0784_RS25105	COG3033	Beta-eliminating lyase
D0784_RS25120	COG0579	oxidoreductase
D0784_RS25140	COG1114	Component of the transport system for branched-chain amino acids
D0784_RS25185	COG0583	DNA-binding transcription factor activity
D0784_RS25195	COG0189	ligase activity
D0784_RS25200	COG4067	protein conserved in archaea
D0784_RS25200	COG0189	ligase activity
D0784_RS25210	COG1166	arginine decarboxylase activity
D0784_RS25215	COG0010	Belongs to the arginase family
D0784_RS25220	COG2814	Major facilitator Superfamily
D0784_RS25225	COG1770	oligopeptidase
D0784_RS25240	COG1108	ABC-type Mn2 Zn2 transport systems permease components
D0784_RS25245	COG1121	(ABC) transporter
D0784_RS25250	COG0803	Belongs to the bacterial solute-binding protein 9 family
D0784_RS25295	COG0848	biopolymer transport protein
D0784_RS25300	COG0811	peptide transport
D0784_RS25305	COG0811	peptide transport
D0784_RS25325	COG0745	RESPONSE REGULATOR receiver
D0784_RS25330	COG0584	glycerophosphoryl diester phosphodiesterase
D0784_RS25340	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
D0784_RS25405	COG0312	modulator of DNA gyrase
D0784_RS25410	COG0312	modulator of DNA gyrase
D0784_RS25415	COG0351	phosphomethylpyrimidine kinase
D0784_RS25420	COG1116	anion transmembrane transporter activity
D0784_RS25425	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
D0784_RS25430	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
D0784_RS25435	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
D0784_RS25450	COG0671	phosphoesterase, PA-phosphatase related
D0784_RS25455	COG0243	molybdopterin cofactor binding
D0784_RS25460	COG3005	denitrification pathway
D0784_RS25470	COG1028	Short-chain dehydrogenase reductase Sdr
D0784_RS25490	COG0456	acetyltransferase
D0784_RS25530	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D0784_RS25535	COG1929	Belongs to the glycerate kinase type-1 family
D0784_RS25540	COG3835	regulator
D0784_RS25635	COG3408	Glycogen debranching enzyme
D0784_RS25635	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
D0784_RS25655	COG2814	Major facilitator Superfamily
D0784_RS25665	COG3047	cAMP biosynthetic process
D0784_RS25670	COG1357	PFAM Pentapeptide repeats (8 copies)
D0784_RS25685	COG0534	Mate efflux family protein
D0784_RS25700	COG2076	Multidrug Resistance protein
D0784_RS25755	COG0583	DNA-binding transcription factor activity
D0784_RS25775	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
D0784_RS25790	COG3152	Membrane
D0784_RS25810	COG0561	phosphatase activity
D0784_RS25820	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
D0784_RS25825	COG0564	pseudouridine synthase activity
D0784_RS25830	COG0534	Mate efflux family protein
D0784_RS25835	COG1472	Belongs to the glycosyl hydrolase 3 family
D0784_RS25855	COG1609	Transcriptional regulator
D0784_RS25865	COG4608	Belongs to the ABC transporter superfamily
D0784_RS25870	COG0444	Belongs to the ABC transporter superfamily
D0784_RS25875	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
D0784_RS25885	COG0747	negative chemotaxis
D0784_RS25895	COG1609	Transcriptional regulator
D0784_RS25900	COG3842	ATPase activity
D0784_RS25905	COG2723	6-phospho-beta-galactosidase activity
D0784_RS25910	COG0395	ABC-type sugar transport system, permease component
D0784_RS25925	COG1609	Transcriptional regulator
D0784_RS25940	COG5001	Diguanylate cyclase
D0784_RS25990	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
D0784_RS26000	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
D0784_RS26005	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
D0784_RS26015	COG2259	Doxx family
D0784_RS26070	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
D0784_RS26075	COG0251	oxidation-reduction process
D0784_RS26090	COG0659	secondary active sulfate transmembrane transporter activity
D0784_RS26100	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
D0784_RS26110	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
D0784_RS26115	COG2207	Transcriptional regulator
D0784_RS26125	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
D0784_RS26130	COG0830	nickel cation binding
D0784_RS26135	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
D0784_RS26140	COG0804	urea catabolic process
D0784_RS26145	COG0832	Belongs to the urease beta subunit family
D0784_RS26150	COG0831	urea catabolic process
D0784_RS26155	COG0829	nickel cation binding
D0784_RS26170	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
D0784_RS26195	COG0786	glutamate:sodium symporter activity
D0784_RS26200	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
D0784_RS26205	COG1131	(ABC) transporter
D0784_RS26240	COG1028	Short-chain dehydrogenase reductase Sdr
D0784_RS26245	COG0786	glutamate:sodium symporter activity
D0784_RS26265	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
D0784_RS26275	COG3279	Response regulator of the LytR AlgR family
D0784_RS26280	COG3275	phosphorelay sensor kinase activity
D0784_RS26300	COG1136	(ABC) transporter
D0784_RS26310	COG0583	DNA-binding transcription factor activity
D0784_RS26315	COG1566	PFAM secretion protein HlyD family protein
D0784_RS26330	COG0772	Belongs to the SEDS family
D0784_RS26355	COG3236	hydrolase activity, hydrolyzing N-glycosyl compounds
D0784_RS26355	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
D0784_RS26365	COG0444	Belongs to the ABC transporter superfamily
D0784_RS26370	COG4608	Belongs to the ABC transporter superfamily
D0784_RS26405	COG1444	tRNA N-acetyltransferase activity
D0784_RS26690	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
D0784_RS26725	COG3504	Conjugal transfer protein
D0784_RS26740	COG4962	Type ii secretion system protein e
D0784_RS26750	COG3451	type IV secretory pathway VirB4
D0784_RS26755	COG5268	conjugation
D0784_RS26785	COG1192	Involved in chromosome partitioning