Vc3S01_RS00020 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS00055 SM00487 DEAD-like helicases superfamily Vc3S01_RS00110 SM01234 Vc3S01_RS00110 Vc3S01_RS00125 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS00135 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS00135 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Vc3S01_RS00145 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS00145 SM00760 Bacterial dnaA protein helix-turn-helix domain Vc3S01_RS00150 SM00480 DNA polymerase III beta subunit Vc3S01_RS00160 SM00387 Histidine kinase-like ATPases Vc3S01_RS00160 SM00433 TopoisomeraseII Vc3S01_RS00210 SM00829 Enoylreductase Vc3S01_RS00320 SM00876 Biotin and Thiamin Synthesis associated domain Vc3S01_RS00380 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS00400 SM00341 Helicase and RNase D C-terminal Vc3S01_RS00400 SM00487 DEAD-like helicases superfamily Vc3S01_RS00400 SM00490 helicase superfamily c-terminal domain Vc3S01_RS00400 SM00956 Vc3S01_RS00400 Vc3S01_RS00420 SM00487 DEAD-like helicases superfamily Vc3S01_RS00420 SM00490 helicase superfamily c-terminal domain Vc3S01_RS00430 SM00357 Cold shock protein domain Vc3S01_RS00430 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS00430 SM00959 Rho termination factor, N-terminal domain Vc3S01_RS00510 SM01219 Vc3S01_RS00510 Vc3S01_RS00545 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS00545 SM00267 diguanylate cyclase Vc3S01_RS00545 SM00897 FIST N domain Vc3S01_RS00545 SM01204 Vc3S01_RS00545 Vc3S01_RS00550 SM01144 Vc3S01_RS00550 Vc3S01_RS00585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vc3S01_RS00590 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vc3S01_RS00660 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS00660 SM00962 SRP54-type protein, GTPase domain Vc3S01_RS00660 SM00963 SRP54-type protein, helical bundle domain Vc3S01_RS00665 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS00685 SM00450 Rhodanese Homology Domain Vc3S01_RS00710 SM00563 Phosphate acyltransferases Vc3S01_RS00770 SM00360 RNA recognition motif Vc3S01_RS00835 SM00155 Phospholipase D. Active site motifs. Vc3S01_RS00900 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Vc3S01_RS00900 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Vc3S01_RS00905 SM00649 Ribosomal protein L11/L12 Vc3S01_RS00930 SM00663 RNA polymerase I subunit A N-terminus Vc3S01_RS00965 SM00986 Uracil DNA glycosylase superfamily Vc3S01_RS00965 SM00987 UreE urease accessory protein, C-terminal domain Vc3S01_RS00985 SM00411 bacterial (prokaryotic) histone like domain Vc3S01_RS00995 SM01209 Vc3S01_RS00995 Vc3S01_RS00995 SM01210 Vc3S01_RS00995 Vc3S01_RS01000 SM00798 AICARFT/IMPCHase bienzyme Vc3S01_RS01000 SM00851 MGS-like domain Vc3S01_RS01010 SM00422 helix_turn_helix, mercury resistance Vc3S01_RS01015 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS01075 SM00267 diguanylate cyclase Vc3S01_RS01095 SM00878 Biotin carboxylase C-terminal domain Vc3S01_RS01115 SM00479 Vc3S01_RS01115 Vc3S01_RS01130 SM00387 Histidine kinase-like ATPases Vc3S01_RS01130 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS01130 SM00448 cheY-homologous receiver domain Vc3S01_RS01165 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS01165 SM00448 cheY-homologous receiver domain Vc3S01_RS01200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS01200 SM00387 Histidine kinase-like ATPases Vc3S01_RS01200 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS01205 SM00448 cheY-homologous receiver domain Vc3S01_RS01205 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS01230 SM00883 Chaperonin 10 Kd subunit Vc3S01_RS01255 SM00841 Elongation factor P, C-terminal Vc3S01_RS01255 SM01185 Vc3S01_RS01255 Vc3S01_RS01315 SM00971 Serine acetyltransferase, N-terminal Vc3S01_RS01330 SM00450 Rhodanese Homology Domain Vc3S01_RS01345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS01345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS01365 SM00479 Vc3S01_RS01365 Vc3S01_RS01445 SM00257 Lysin motif Vc3S01_RS01445 SM00646 Vc3S01_RS01445 Vc3S01_RS01450 SM00853 MutL C terminal dimerisation domain Vc3S01_RS01450 SM01340 Vc3S01_RS01450 Vc3S01_RS01470 SM00244 prohibitin homologues Vc3S01_RS01475 SM00244 prohibitin homologues Vc3S01_RS01485 SM00788 Adenylosuccinate synthetase Vc3S01_RS01495 SM00671 Sel1-like repeats. Vc3S01_RS01510 SM00316 Ribosomal protein S1-like RNA-binding domain Vc3S01_RS01510 SM00357 Cold shock protein domain Vc3S01_RS01510 SM00955 Vc3S01_RS01510 Vc3S01_RS01515 SM00967 RNA 2'-O ribose methyltransferase substrate binding Vc3S01_RS01560 SM01150 Vc3S01_RS01560 Vc3S01_RS01565 SM00100 Cyclic nucleotide-monophosphate binding domain Vc3S01_RS01565 SM00419 helix_turn_helix, cAMP Regulatory protein Vc3S01_RS01590 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS01630 SM00320 WD40 repeats Vc3S01_RS01670 SM00838 Elongation factor G C-terminus Vc3S01_RS01670 SM00889 Elongation factor G, domain IV Vc3S01_RS01690 SM00919 Malic enzyme, NAD binding domain Vc3S01_RS01690 SM01274 Vc3S01_RS01690 Vc3S01_RS01730 SM00859 Semialdehyde dehydrogenase, NAD binding domain Vc3S01_RS01780 SM00842 Cell division protein FtsA Vc3S01_RS01800 SM00965 Secretin and TonB N terminus short domain Vc3S01_RS01860 SM01005 Alanine racemase, C-terminal domain Vc3S01_RS01985 SM00327 von Willebrand factor (vWF) type A domain Vc3S01_RS01990 SM00857 Resolvase, N terminal domain Vc3S01_RS01995 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS02110 SM01018 B12 binding domain Vc3S01_RS02145 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS02155 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS02155 SM00267 diguanylate cyclase Vc3S01_RS02175 SM00965 Secretin and TonB N terminus short domain Vc3S01_RS02185 SM00028 Tetratricopeptide repeats Vc3S01_RS02190 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS02260 SM00316 Ribosomal protein S1-like RNA-binding domain Vc3S01_RS02280 SM00670 Large family of predicted nucleotide-binding domains Vc3S01_RS02285 SM00487 DEAD-like helicases superfamily Vc3S01_RS02285 SM00490 helicase superfamily c-terminal domain Vc3S01_RS02315 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS02315 SM00924 MgtE intracellular N domain Vc3S01_RS02345 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS02360 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS02370 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS02405 SM00563 Phosphate acyltransferases Vc3S01_RS02450 SM00347 helix_turn_helix multiple antibiotic resistance protein Vc3S01_RS02490 SM00822 Vc3S01_RS02490 Vc3S01_RS02500 SM00495 Chitin-binding domain type 3 Vc3S01_RS02530 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS02535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS02610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS02610 SM01049 Vc3S01_RS02610 Vc3S01_RS02660 SM00478 endonuclease III Vc3S01_RS02660 SM00525 Vc3S01_RS02660 Vc3S01_RS02680 SM00729 Elongator protein 3, MiaB family, Radical SAM Vc3S01_RS02695 SM01152 Vc3S01_RS02695 Vc3S01_RS02715 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS02725 SM00732 Likely ribonuclease with RNase H fold. Vc3S01_RS02750 SM00731 SprT homologues. Vc3S01_RS02765 SM00861 Transketolase, pyrimidine binding domain Vc3S01_RS02775 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vc3S01_RS02905 SM00838 Elongation factor G C-terminus Vc3S01_RS02915 SM00358 Double-stranded RNA binding motif Vc3S01_RS02915 SM00535 Ribonuclease III family Vc3S01_RS02940 SM00073 Histidine Phosphotransfer domain Vc3S01_RS02940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS02940 SM00387 Histidine kinase-like ATPases Vc3S01_RS02940 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS02940 SM00448 cheY-homologous receiver domain Vc3S01_RS02955 SM00954 Region found in RelA / SpoT proteins Vc3S01_RS02970 SM01192 Vc3S01_RS02970 Vc3S01_RS02970 SM01193 Vc3S01_RS02970 Vc3S01_RS03005 SM00257 Lysin motif Vc3S01_RS03015 SM00533 DNA-binding domain of DNA mismatch repair MUTS family Vc3S01_RS03015 SM00534 ATPase domain of DNA mismatch repair MUTS family Vc3S01_RS03025 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS03035 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Vc3S01_RS03115 SM00829 Enoylreductase Vc3S01_RS03145 SM01091 Transporter associated domain Vc3S01_RS03155 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS03155 SM00962 SRP54-type protein, GTPase domain Vc3S01_RS03155 SM00963 SRP54-type protein, helical bundle domain Vc3S01_RS03230 SM00644 Vc3S01_RS03230 Vc3S01_RS03235 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS03235 SM00895 Vc3S01_RS03235 Vc3S01_RS03270 SM00947 Carbonic anhydrase Vc3S01_RS03280 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS03330 SM00487 DEAD-like helicases superfamily Vc3S01_RS03330 SM00490 helicase superfamily c-terminal domain Vc3S01_RS03330 SM00847 Helicase associated domain (HA2) Add an annotation Vc3S01_RS03355 SM00938 Nitrogen regulatory protein P-II Vc3S01_RS03375 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS03385 SM01068 Putative carbohydrate binding domain Vc3S01_RS03405 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS03410 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS03430 SM00091 PAS domain Vc3S01_RS03430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS03430 SM00387 Histidine kinase-like ATPases Vc3S01_RS03430 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS03430 SM00448 cheY-homologous receiver domain Vc3S01_RS03480 SM00363 S4 RNA-binding domain Vc3S01_RS03505 SM01103 Vc3S01_RS03505 Vc3S01_RS03515 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS03555 SM00316 Ribosomal protein S1-like RNA-binding domain Vc3S01_RS03575 SM01387 Vc3S01_RS03575 Vc3S01_RS03580 SM00316 Ribosomal protein S1-like RNA-binding domain Vc3S01_RS03580 SM00322 K homology RNA-binding domain Vc3S01_RS03585 SM00028 Tetratricopeptide repeats Vc3S01_RS03590 SM00347 helix_turn_helix multiple antibiotic resistance protein Vc3S01_RS03610 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS03610 SM00091 PAS domain Vc3S01_RS03610 SM00267 diguanylate cyclase Vc3S01_RS03640 SM00267 diguanylate cyclase Vc3S01_RS03660 SM01133 Vc3S01_RS03660 Vc3S01_RS03665 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain Vc3S01_RS03695 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS03700 SM00838 Elongation factor G C-terminus Vc3S01_RS03700 SM00889 Elongation factor G, domain IV Vc3S01_RS03745 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS03765 SM00858 Vc3S01_RS03765 Vc3S01_RS03815 SM00028 Tetratricopeptide repeats Vc3S01_RS03855 SM01038 Beta galactosidase small chain Vc3S01_RS03860 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS03895 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS03940 SM00420 helix_turn_helix, Deoxyribose operon repressor Vc3S01_RS03940 SM01134 Vc3S01_RS03940 Vc3S01_RS04030 SM00257 Lysin motif Vc3S01_RS04060 SM00925 MltA specific insert domain Vc3S01_RS04100 SM00464 Found in ATP-dependent protease La (LON) Vc3S01_RS04155 SM00900 Vc3S01_RS04155 Vc3S01_RS04185 SM00267 diguanylate cyclase Vc3S01_RS04185 SM00448 cheY-homologous receiver domain Vc3S01_RS04195 SM00487 DEAD-like helicases superfamily Vc3S01_RS04195 SM00490 helicase superfamily c-terminal domain Vc3S01_RS04210 SM00495 Chitin-binding domain type 3 Vc3S01_RS04210 SM00636 Vc3S01_RS04210 Vc3S01_RS04305 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS04350 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Vc3S01_RS04360 SM00935 Outer membrane protein (OmpH-like) Vc3S01_RS04390 SM00481 DNA polymerase alpha chain like domain Vc3S01_RS04400 SM00977 TilS substrate C-terminal domain Vc3S01_RS04410 SM00938 Nitrogen regulatory protein P-II Vc3S01_RS04425 SM00257 Lysin motif Vc3S01_RS04430 SM00849 Metallo-beta-lactamase superfamily Vc3S01_RS04445 SM00479 Vc3S01_RS04445 Vc3S01_RS04520 SM00028 Tetratricopeptide repeats Vc3S01_RS04545 SM01130 Vc3S01_RS04545 Vc3S01_RS04605 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS04665 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS04670 SM00387 Histidine kinase-like ATPases Vc3S01_RS04670 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS04675 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS04675 SM00448 cheY-homologous receiver domain Vc3S01_RS04700 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS04765 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS04765 SM00962 SRP54-type protein, GTPase domain Vc3S01_RS04780 SM00448 cheY-homologous receiver domain Vc3S01_RS04790 SM00073 Histidine Phosphotransfer domain Vc3S01_RS04790 SM00260 Two component signalling adaptor domain Vc3S01_RS04790 SM00387 Histidine kinase-like ATPases Vc3S01_RS04790 SM01231 Vc3S01_RS04790 Vc3S01_RS04795 SM00448 cheY-homologous receiver domain Vc3S01_RS04805 SM00260 Two component signalling adaptor domain Vc3S01_RS04810 SM00260 Two component signalling adaptor domain Vc3S01_RS04820 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS04915 SM00855 Phosphoglycerate mutase family Vc3S01_RS04920 SM00463 Small MutS-related domain Vc3S01_RS04965 SM00825 Beta-ketoacyl synthase Vc3S01_RS04980 SM00859 Semialdehyde dehydrogenase, NAD binding domain Vc3S01_RS05030 SM00448 cheY-homologous receiver domain Vc3S01_RS05050 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS05060 SM00493 Vc3S01_RS05060 Vc3S01_RS05135 SM00098 Alkaline phosphatase homologues Vc3S01_RS05175 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vc3S01_RS05195 SM00870 Vc3S01_RS05195 Vc3S01_RS05215 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Vc3S01_RS05215 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Vc3S01_RS05215 SM00493 Vc3S01_RS05215 Vc3S01_RS05285 SM00859 Semialdehyde dehydrogenase, NAD binding domain Vc3S01_RS05350 SM00507 HNH nucleases Vc3S01_RS05410 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS05430 SM00148 Phospholipase C, catalytic domain (part); domain X Vc3S01_RS05575 SM00479 Vc3S01_RS05575 Vc3S01_RS05595 SM00478 endonuclease III Vc3S01_RS05595 SM00525 Vc3S01_RS05595 Vc3S01_RS05605 SM00900 Vc3S01_RS05605 Vc3S01_RS05635 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS05675 SM00487 DEAD-like helicases superfamily Vc3S01_RS05675 SM00490 helicase superfamily c-terminal domain Vc3S01_RS05680 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS05680 SM00448 cheY-homologous receiver domain Vc3S01_RS05695 SM00729 Elongator protein 3, MiaB family, Radical SAM Vc3S01_RS05700 SM00852 Probable molybdopterin binding domain Vc3S01_RS05735 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS05740 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS05785 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS05790 SM00642 Alpha-amylase domain Vc3S01_RS05795 SM00267 diguanylate cyclase Vc3S01_RS05820 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS05855 SM00226 Low molecular weight phosphatase family Vc3S01_RS05870 SM00316 Ribosomal protein S1-like RNA-binding domain Vc3S01_RS05875 SM00363 S4 RNA-binding domain Vc3S01_RS05905 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. Vc3S01_RS05910 SM00822 Vc3S01_RS05910 Vc3S01_RS05920 SM00825 Beta-ketoacyl synthase Vc3S01_RS06015 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS06035 SM00260 Two component signalling adaptor domain Vc3S01_RS06035 SM00448 cheY-homologous receiver domain Vc3S01_RS06040 SM00481 DNA polymerase alpha chain like domain Vc3S01_RS06055 SM00822 Vc3S01_RS06055 Vc3S01_RS06070 SM00316 Ribosomal protein S1-like RNA-binding domain Vc3S01_RS06075 SM00411 bacterial (prokaryotic) histone like domain Vc3S01_RS06085 SM00028 Tetratricopeptide repeats Vc3S01_RS06090 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family Vc3S01_RS06205 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS06220 SM00479 Vc3S01_RS06220 Vc3S01_RS06280 SM00220 Serine/Threonine protein kinases, catalytic domain Vc3S01_RS06280 SM00364 Leucine-rich repeats, bacterial type Vc3S01_RS06280 SM00369 Leucine-rich repeats, typical (most populated) subfamily Vc3S01_RS06285 SM00387 Histidine kinase-like ATPases Vc3S01_RS06285 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS06290 SM00448 cheY-homologous receiver domain Vc3S01_RS06290 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS06310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS06310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS06355 SM00729 Elongator protein 3, MiaB family, Radical SAM Vc3S01_RS06360 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS06360 SM00091 PAS domain Vc3S01_RS06410 SM00387 Histidine kinase-like ATPases Vc3S01_RS06410 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS06410 SM00448 cheY-homologous receiver domain Vc3S01_RS06460 SM00481 DNA polymerase alpha chain like domain Vc3S01_RS06475 SM00363 S4 RNA-binding domain Vc3S01_RS06485 SM00841 Elongation factor P, C-terminal Vc3S01_RS06485 SM01185 Vc3S01_RS06485 Vc3S01_RS06495 SM00486 DNA polymerase type-B family Vc3S01_RS06500 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS06500 SM00448 cheY-homologous receiver domain Vc3S01_RS06505 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Vc3S01_RS06505 SM00465 GIY-YIG type nucleases (URI domain) Vc3S01_RS06560 SM00852 Probable molybdopterin binding domain Vc3S01_RS06585 SM00434 DNA Topoisomerase IV Vc3S01_RS06675 SM00849 Metallo-beta-lactamase superfamily Vc3S01_RS06705 SM00387 Histidine kinase-like ATPases Vc3S01_RS06705 SM01049 Vc3S01_RS06705 Vc3S01_RS06710 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS06710 SM00448 cheY-homologous receiver domain Vc3S01_RS06715 SM00347 helix_turn_helix multiple antibiotic resistance protein Vc3S01_RS06725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS06725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS06730 SM00479 Vc3S01_RS06730 Vc3S01_RS06735 SM00100 Cyclic nucleotide-monophosphate binding domain Vc3S01_RS06735 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS06765 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS06785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS06785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS06795 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS06805 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS06830 SM00387 Histidine kinase-like ATPases Vc3S01_RS06830 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS06830 SM00448 cheY-homologous receiver domain Vc3S01_RS06860 SM00091 PAS domain Vc3S01_RS06860 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS06885 SM00901 Vc3S01_RS06885 Vc3S01_RS07265 SM00954 Region found in RelA / SpoT proteins Vc3S01_RS07945 SM00100 Cyclic nucleotide-monophosphate binding domain Vc3S01_RS07945 SM00387 Histidine kinase-like ATPases Vc3S01_RS07950 SM00448 cheY-homologous receiver domain Vc3S01_RS07955 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS07955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vc3S01_RS07955 SM00267 diguanylate cyclase Vc3S01_RS07960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS07990 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. Vc3S01_RS07995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS08030 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS08035 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS08085 SM00267 diguanylate cyclase Vc3S01_RS08085 SM01079 Vc3S01_RS08085 Vc3S01_RS08090 SM00479 Vc3S01_RS08090 Vc3S01_RS08110 SM00458 Ricin-type beta-trefoil Vc3S01_RS08135 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS08145 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS08170 SM01217 Vc3S01_RS08170 Vc3S01_RS08175 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS08205 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS08205 SM00487 DEAD-like helicases superfamily Vc3S01_RS08205 SM00490 helicase superfamily c-terminal domain Vc3S01_RS08205 SM00847 Helicase associated domain (HA2) Add an annotation Vc3S01_RS08225 SM00245 tail specific protease Vc3S01_RS08230 SM00028 Tetratricopeptide repeats Vc3S01_RS08305 SM00999 Aerolysin toxin Vc3S01_RS08325 SM00999 Aerolysin toxin Vc3S01_RS08335 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS08390 SM00100 Cyclic nucleotide-monophosphate binding domain Vc3S01_RS08390 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS08395 SM00479 Vc3S01_RS08395 Vc3S01_RS08625 SM00091 PAS domain Vc3S01_RS08625 SM00387 Histidine kinase-like ATPases Vc3S01_RS08630 SM00448 cheY-homologous receiver domain Vc3S01_RS08645 SM01350 Vc3S01_RS08645 Vc3S01_RS08675 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS08720 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS08720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS08725 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS08725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS08730 SM00220 Serine/Threonine protein kinases, catalytic domain Vc3S01_RS08765 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS08765 SM01086 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS08830 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS08830 SM00895 Vc3S01_RS08830 Vc3S01_RS08875 SM00020 Trypsin-like serine protease Vc3S01_RS08875 SM00495 Chitin-binding domain type 3 Vc3S01_RS08900 SM00028 Tetratricopeptide repeats Vc3S01_RS08900 SM00267 diguanylate cyclase Vc3S01_RS08975 SM00237 Domains in Na-Ca exchangers and integrin-beta4 Vc3S01_RS08980 SM00327 von Willebrand factor (vWF) type A domain Vc3S01_RS08995 SM00237 Domains in Na-Ca exchangers and integrin-beta4 Vc3S01_RS09000 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Vc3S01_RS09010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS09035 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS09050 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS09100 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS09110 SM00945 ProQ/FINO family Vc3S01_RS09115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Vc3S01_RS09115 SM00245 tail specific protease Vc3S01_RS09150 SM00981 Vc3S01_RS09150 Vc3S01_RS09160 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS09220 SM00387 Histidine kinase-like ATPases Vc3S01_RS09220 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS09220 SM00448 cheY-homologous receiver domain Vc3S01_RS09225 SM00897 FIST N domain Vc3S01_RS09225 SM01204 Vc3S01_RS09225 Vc3S01_RS09275 SM00100 Cyclic nucleotide-monophosphate binding domain Vc3S01_RS09275 SM00419 helix_turn_helix, cAMP Regulatory protein Vc3S01_RS09305 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS09355 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS09400 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS09415 SM00387 Histidine kinase-like ATPases Vc3S01_RS09415 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS09420 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS09420 SM00448 cheY-homologous receiver domain Vc3S01_RS09435 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS09445 SM00852 Probable molybdopterin binding domain Vc3S01_RS09460 SM01144 Vc3S01_RS09460 Vc3S01_RS09510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS09525 SM00267 diguanylate cyclase Vc3S01_RS09530 SM00448 cheY-homologous receiver domain Vc3S01_RS09590 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS09590 SM00448 cheY-homologous receiver domain Vc3S01_RS09650 SM01276 Vc3S01_RS09650 Vc3S01_RS09675 SM00267 diguanylate cyclase Vc3S01_RS09680 SM00387 Histidine kinase-like ATPases Vc3S01_RS09680 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS09680 SM00448 cheY-homologous receiver domain Vc3S01_RS09700 SM01266 Vc3S01_RS09700 Vc3S01_RS09710 SM01118 Vc3S01_RS09710 Vc3S01_RS09725 SM00347 helix_turn_helix multiple antibiotic resistance protein Vc3S01_RS09770 SM00872 Alpha mannosidase, middle domain Vc3S01_RS09825 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Vc3S01_RS09825 SM00495 Chitin-binding domain type 3 Vc3S01_RS09845 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS09875 SM00257 Lysin motif Vc3S01_RS09895 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS09905 SM00495 Chitin-binding domain type 3 Vc3S01_RS10040 SM00267 diguanylate cyclase Vc3S01_RS10060 SM00635 Bacterial Ig-like domain 2 Vc3S01_RS10075 SM00448 cheY-homologous receiver domain Vc3S01_RS10085 SM00387 Histidine kinase-like ATPases Vc3S01_RS10085 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS10085 SM00448 cheY-homologous receiver domain Vc3S01_RS10100 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS10195 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS10215 SM00855 Phosphoglycerate mutase family Vc3S01_RS10235 SM00903 Flavin reductase like domain Vc3S01_RS10255 SM00479 Vc3S01_RS10255 Vc3S01_RS10295 SM00411 bacterial (prokaryotic) histone like domain Vc3S01_RS10360 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS10365 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS10375 SM00873 B3/4 domain Vc3S01_RS10375 SM00874 tRNA synthetase B5 domain Vc3S01_RS10375 SM00896 Ferredoxin-fold anticodon binding domain Vc3S01_RS10385 SM00267 diguanylate cyclase Vc3S01_RS10410 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS10455 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain Vc3S01_RS10465 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS10465 SM00866 Vc3S01_RS10465 Vc3S01_RS10550 SM00671 Sel1-like repeats. Vc3S01_RS10590 SM00487 DEAD-like helicases superfamily Vc3S01_RS10590 SM00490 helicase superfamily c-terminal domain Vc3S01_RS10590 SM00847 Helicase associated domain (HA2) Add an annotation Vc3S01_RS10595 SM00919 Malic enzyme, NAD binding domain Vc3S01_RS10595 SM01274 Vc3S01_RS10595 Vc3S01_RS10610 SM00267 diguanylate cyclase Vc3S01_RS10635 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS10640 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS10660 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS10665 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS10670 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS10675 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS10690 SM00267 diguanylate cyclase Vc3S01_RS10715 SM00387 Histidine kinase-like ATPases Vc3S01_RS10720 SM00448 cheY-homologous receiver domain Vc3S01_RS10810 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS10840 SM00363 S4 RNA-binding domain Vc3S01_RS10845 SM00487 DEAD-like helicases superfamily Vc3S01_RS10845 SM00490 helicase superfamily c-terminal domain Vc3S01_RS10865 SM00267 diguanylate cyclase Vc3S01_RS10875 SM00448 cheY-homologous receiver domain Vc3S01_RS10875 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS10880 SM00387 Histidine kinase-like ATPases Vc3S01_RS10940 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS10940 SM00448 cheY-homologous receiver domain Vc3S01_RS10945 SM00387 Histidine kinase-like ATPases Vc3S01_RS10945 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS10950 SM00450 Rhodanese Homology Domain Vc3S01_RS10980 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS10990 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS11000 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Vc3S01_RS11000 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS11025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS11035 SM00155 Phospholipase D. Active site motifs. Vc3S01_RS11100 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11120 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11125 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11135 SM01131 Vc3S01_RS11135 Vc3S01_RS11210 SM00840 Vc3S01_RS11210 Vc3S01_RS11225 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS11275 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11285 SM00528 Domain in histone-like proteins of HNS family Vc3S01_RS11380 SM00729 Elongator protein 3, MiaB family, Radical SAM Vc3S01_RS11380 SM00876 Biotin and Thiamin Synthesis associated domain Vc3S01_RS11410 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11420 SM00843 Vc3S01_RS11420 Vc3S01_RS11425 SM00344 helix_turn_helix ASNC type Vc3S01_RS11430 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Vc3S01_RS11430 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Vc3S01_RS11485 SM00466 SET and RING finger associated domain. Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. Vc3S01_RS11485 SM00507 HNH nucleases Vc3S01_RS11510 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS11535 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS11535 SM00895 Vc3S01_RS11535 Vc3S01_RS11540 SM00347 helix_turn_helix multiple antibiotic resistance protein Vc3S01_RS11555 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS11565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS11565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS11585 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11590 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11715 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11845 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS11900 SM00387 Histidine kinase-like ATPases Vc3S01_RS11900 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS11900 SM00448 cheY-homologous receiver domain Vc3S01_RS11935 SM00028 Tetratricopeptide repeats Vc3S01_RS11990 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS11995 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Vc3S01_RS12000 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS12070 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS12100 SM00448 cheY-homologous receiver domain Vc3S01_RS12100 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS12110 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS12145 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Vc3S01_RS12145 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Vc3S01_RS12145 SM00493 Vc3S01_RS12145 Vc3S01_RS12175 SM00316 Ribosomal protein S1-like RNA-binding domain Vc3S01_RS12180 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS12180 SM01086 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS12190 SM00357 Cold shock protein domain Vc3S01_RS12215 SM00491 Vc3S01_RS12215 Vc3S01_RS12250 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS12250 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Vc3S01_RS12255 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS12300 SM00763 PrkA AAA domain Vc3S01_RS12330 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS12335 SM00849 Metallo-beta-lactamase superfamily Vc3S01_RS12350 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS12365 SM00487 DEAD-like helicases superfamily Vc3S01_RS12365 SM00490 helicase superfamily c-terminal domain Vc3S01_RS12365 SM00982 Vc3S01_RS12365 Vc3S01_RS12365 SM01058 CarD-like/TRCF domain Vc3S01_RS12415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS12415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS12440 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS12465 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS12465 SM00267 diguanylate cyclase Vc3S01_RS12490 SM00344 helix_turn_helix ASNC type Vc3S01_RS12555 SM00978 Vc3S01_RS12555 Vc3S01_RS12565 SM00563 Phosphate acyltransferases Vc3S01_RS12590 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Vc3S01_RS12620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS12625 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS12630 SM01144 Vc3S01_RS12630 Vc3S01_RS12640 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Vc3S01_RS12650 SM00411 bacterial (prokaryotic) histone like domain Vc3S01_RS12655 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS12655 SM00464 Found in ATP-dependent protease La (LON) Vc3S01_RS12660 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS12660 SM00994 ClpX C4-type zinc finger Vc3S01_RS12660 SM01086 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS12675 SM00387 Histidine kinase-like ATPases Vc3S01_RS12675 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS12680 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS12680 SM00448 cheY-homologous receiver domain Vc3S01_RS12725 SM00487 DEAD-like helicases superfamily Vc3S01_RS12725 SM00490 helicase superfamily c-terminal domain Vc3S01_RS12730 SM01091 Transporter associated domain Vc3S01_RS12750 SM00823 Phosphopantetheine attachment site Vc3S01_RS12830 SM00487 DEAD-like helicases superfamily Vc3S01_RS12830 SM00490 helicase superfamily c-terminal domain Vc3S01_RS12915 SM00474 3'-5' exonuclease Vc3S01_RS12945 SM00487 DEAD-like helicases superfamily Vc3S01_RS12945 SM00491 Vc3S01_RS12945 Vc3S01_RS12960 SM00020 Trypsin-like serine protease Vc3S01_RS12975 SM00836 DALR anticodon binding domain Vc3S01_RS12975 SM01016 Arginyl tRNA synthetase N terminal dom Vc3S01_RS13000 SM00899 Vc3S01_RS13000 Vc3S01_RS13005 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS13015 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS13025 SM00881 CoA binding domain Vc3S01_RS13040 SM00861 Transketolase, pyrimidine binding domain Vc3S01_RS13160 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. Vc3S01_RS13180 SM00387 Histidine kinase-like ATPases Vc3S01_RS13185 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS13215 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS13220 SM00938 Nitrogen regulatory protein P-II Vc3S01_RS13255 SM00028 Tetratricopeptide repeats Vc3S01_RS13295 SM00244 prohibitin homologues Vc3S01_RS13320 SM00278 Helix-hairpin-helix DNA-binding motif class 1 Vc3S01_RS13320 SM00292 breast cancer carboxy-terminal domain Vc3S01_RS13320 SM00532 Ligase N family Vc3S01_RS13325 SM00771 ZipA, C-terminal domain (FtsZ-binding) Vc3S01_RS13390 SM00047 Lysozyme subfamily 2 Vc3S01_RS13435 SM00138 Methyltransferase, chemotaxis proteins Vc3S01_RS13440 SM00260 Two component signalling adaptor domain Vc3S01_RS13440 SM00448 cheY-homologous receiver domain Vc3S01_RS13445 SM00858 Vc3S01_RS13445 Vc3S01_RS13530 SM01081 Putative carbohydrate binding domain Vc3S01_RS13555 SM00463 Small MutS-related domain Vc3S01_RS13560 SM00363 S4 RNA-binding domain Vc3S01_RS13600 SM00937 Vc3S01_RS13600 Vc3S01_RS13620 SM01400 Vc3S01_RS13620 Vc3S01_RS13750 SM00729 Elongator protein 3, MiaB family, Radical SAM Vc3S01_RS13765 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS13765 SM01091 Transporter associated domain Vc3S01_RS13820 SM00936 Penicillin-binding protein 5, C-terminal domain Vc3S01_RS13835 SM00729 Elongator protein 3, MiaB family, Radical SAM Vc3S01_RS13850 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS13860 SM00642 Alpha-amylase domain Vc3S01_RS13870 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS13880 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS13880 SM00930 Vc3S01_RS13880 Vc3S01_RS13920 SM00028 Tetratricopeptide repeats Vc3S01_RS13925 SM00267 diguanylate cyclase Vc3S01_RS13935 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Vc3S01_RS13935 SM00475 5'-3' exonuclease Vc3S01_RS13965 SM00981 Vc3S01_RS13965 Vc3S01_RS13990 SM00861 Transketolase, pyrimidine binding domain Vc3S01_RS14040 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase Vc3S01_RS14090 SM01211 Vc3S01_RS14090 Vc3S01_RS14095 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS14150 SM00271 DnaJ molecular chaperone homology domain Vc3S01_RS14255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS14280 SM00495 Chitin-binding domain type 3 Vc3S01_RS14295 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS14295 SM01240 Vc3S01_RS14295 Vc3S01_RS14310 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Vc3S01_RS14310 SM00267 diguanylate cyclase Vc3S01_RS14320 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS14325 SM00564 beta-propeller repeat Vc3S01_RS14345 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS14355 SM00562 Vc3S01_RS14355 Vc3S01_RS14380 SM00271 DnaJ molecular chaperone homology domain Vc3S01_RS14425 SM01323 Vc3S01_RS14425 Vc3S01_RS14440 SM00020 Trypsin-like serine protease Vc3S01_RS14450 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS14505 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS14535 SM00091 PAS domain Vc3S01_RS14535 SM00387 Histidine kinase-like ATPases Vc3S01_RS14535 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS14540 SM00448 cheY-homologous receiver domain Vc3S01_RS14540 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS14620 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS14620 SM01086 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS14630 SM00363 S4 RNA-binding domain Vc3S01_RS14640 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS14650 SM00830 Chorismate mutase type II Vc3S01_RS14670 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS14685 SM00830 Chorismate mutase type II Vc3S01_RS14730 SM00448 cheY-homologous receiver domain Vc3S01_RS14730 SM00850 LytTr DNA-binding domain Vc3S01_RS14755 SM00904 Riboflavin kinase Vc3S01_RS14770 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vc3S01_RS14800 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Vc3S01_RS14810 SM00927 DNA mismatch repair enzyme MutH Vc3S01_RS14830 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS14875 SM00487 DEAD-like helicases superfamily Vc3S01_RS14875 SM00490 helicase superfamily c-terminal domain Vc3S01_RS14905 SM00986 Uracil DNA glycosylase superfamily Vc3S01_RS14905 SM00987 UreE urease accessory protein, C-terminal domain Vc3S01_RS14915 SM00518 AP endonuclease family 2 Vc3S01_RS14965 SM00448 cheY-homologous receiver domain Vc3S01_RS14965 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS14975 SM00073 Histidine Phosphotransfer domain Vc3S01_RS14975 SM00091 PAS domain Vc3S01_RS14975 SM00387 Histidine kinase-like ATPases Vc3S01_RS14975 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS14975 SM00448 cheY-homologous receiver domain Vc3S01_RS14985 SM00091 PAS domain Vc3S01_RS14985 SM00267 diguanylate cyclase Vc3S01_RS14990 SM00729 Elongator protein 3, MiaB family, Radical SAM Vc3S01_RS15060 SM00851 MGS-like domain Vc3S01_RS15060 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Vc3S01_RS15065 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain Vc3S01_RS15080 SM00957 SecA DEAD-like domain Vc3S01_RS15080 SM00958 SecA preprotein cross-linking domain Vc3S01_RS15095 SM00864 Tubulin/FtsZ family, GTPase domain Vc3S01_RS15095 SM00865 Tubulin/FtsZ family, C-terminal domain Vc3S01_RS15100 SM00842 Cell division protein FtsA Vc3S01_RS15190 SM00749 bacterial OsmY and nodulation domain Vc3S01_RS15240 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Vc3S01_RS15245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. Vc3S01_RS15250 SM00434 DNA Topoisomerase IV Vc3S01_RS15255 SM00387 Histidine kinase-like ATPases Vc3S01_RS15255 SM00433 TopoisomeraseII Vc3S01_RS15295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS15305 SM00880 Vc3S01_RS15305 Vc3S01_RS15305 SM01118 Vc3S01_RS15305 Vc3S01_RS15320 SM00287 Bacterial SH3 domain homologues Vc3S01_RS15335 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS15355 SM00905 Dihydroneopterin aldolase Vc3S01_RS15360 SM01207 Vc3S01_RS15360 Vc3S01_RS15385 SM00400 zinc finger Vc3S01_RS15385 SM00493 Vc3S01_RS15385 Vc3S01_RS15385 SM00766 DNA primase DnaG DnaB-binding Vc3S01_RS15420 SM00563 Phosphate acyltransferases Vc3S01_RS15445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS15445 SM00387 Histidine kinase-like ATPases Vc3S01_RS15445 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS15450 SM00448 cheY-homologous receiver domain Vc3S01_RS15450 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS15470 SM00420 helix_turn_helix, Deoxyribose operon repressor Vc3S01_RS15470 SM01134 Vc3S01_RS15470 Vc3S01_RS15480 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS15480 SM00895 Vc3S01_RS15480 Vc3S01_RS15485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vc3S01_RS15485 SM00267 diguanylate cyclase Vc3S01_RS15515 SM00014 Acid phosphatase homologues Vc3S01_RS15535 SM00917 LeuA allosteric (dimerisation) domain Vc3S01_RS15540 SM01329 Vc3S01_RS15540 Vc3S01_RS15560 SM00271 DnaJ molecular chaperone homology domain Vc3S01_RS15580 SM00650 Ribosomal RNA adenine dimethylases Vc3S01_RS15660 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS15745 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS15800 SM00487 DEAD-like helicases superfamily Vc3S01_RS15800 SM00490 helicase superfamily c-terminal domain Vc3S01_RS15835 SM00662 RNA polymerases D Vc3S01_RS15840 SM00363 S4 RNA-binding domain Vc3S01_RS15840 SM01390 Vc3S01_RS15840 Vc3S01_RS15905 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. Vc3S01_RS15910 SM01374 Vc3S01_RS15910 Vc3S01_RS15930 SM00322 K homology RNA-binding domain Vc3S01_RS15945 SM01382 Vc3S01_RS15945 Vc3S01_RS15945 SM01383 Vc3S01_RS15945 Vc3S01_RS15965 SM01403 Vc3S01_RS15965 Vc3S01_RS15975 SM00487 DEAD-like helicases superfamily Vc3S01_RS15975 SM00490 helicase superfamily c-terminal domain Vc3S01_RS15980 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS15995 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS15995 SM01086 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS16050 SM00984 UDP binding domain Vc3S01_RS16110 SM00849 Metallo-beta-lactamase superfamily Vc3S01_RS16110 SM01027 Beta-Casp domain Vc3S01_RS16265 SM00672 Putative lipopolysaccharide-modifying enzyme. Vc3S01_RS16275 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain Vc3S01_RS16275 SM01232 Vc3S01_RS16275 Vc3S01_RS16300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS16300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS16300 SM01049 Vc3S01_RS16300 Vc3S01_RS16355 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS16360 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS16415 SM00028 Tetratricopeptide repeats Vc3S01_RS16420 SM00072 Guanylate kinase homologues. Vc3S01_RS16425 SM01409 Vc3S01_RS16425 Vc3S01_RS16430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS16430 SM00954 Region found in RelA / SpoT proteins Vc3S01_RS16440 SM00487 DEAD-like helicases superfamily Vc3S01_RS16440 SM00490 helicase superfamily c-terminal domain Vc3S01_RS16455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS16455 SM00387 Histidine kinase-like ATPases Vc3S01_RS16455 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS16460 SM00448 cheY-homologous receiver domain Vc3S01_RS16460 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS16475 SM00316 Ribosomal protein S1-like RNA-binding domain Vc3S01_RS16475 SM00732 Likely ribonuclease with RNase H fold. Vc3S01_RS16555 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS16570 SM00363 S4 RNA-binding domain Vc3S01_RS16625 SM01230 Vc3S01_RS16625 Vc3S01_RS16635 SM00091 PAS domain Vc3S01_RS16635 SM00387 Histidine kinase-like ATPases Vc3S01_RS16635 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS16640 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS16640 SM00448 cheY-homologous receiver domain Vc3S01_RS16645 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS16645 SM00267 diguanylate cyclase Vc3S01_RS16645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS16655 SM00729 Elongator protein 3, MiaB family, Radical SAM Vc3S01_RS16690 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs Vc3S01_RS16690 SM00474 3'-5' exonuclease Vc3S01_RS16690 SM00475 5'-3' exonuclease Vc3S01_RS16690 SM00482 DNA polymerase A domain Vc3S01_RS16705 SM01004 Delta-aminolevulinic acid dehydratase Vc3S01_RS16770 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS16770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vc3S01_RS16770 SM00091 PAS domain Vc3S01_RS16770 SM00267 diguanylate cyclase Vc3S01_RS16830 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS16830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vc3S01_RS16830 SM00091 PAS domain Vc3S01_RS16830 SM00267 diguanylate cyclase Vc3S01_RS16835 SM00344 helix_turn_helix ASNC type Vc3S01_RS16915 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS16980 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS16985 SM00220 Serine/Threonine protein kinases, catalytic domain Vc3S01_RS17030 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17190 SM01001 AIR carboxylase Vc3S01_RS17215 SM00257 Lysin motif Vc3S01_RS17285 SM00563 Phosphate acyltransferases Vc3S01_RS17295 SM00267 diguanylate cyclase Vc3S01_RS17300 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17330 SM00267 diguanylate cyclase Vc3S01_RS17345 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS17365 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17405 SM00470 ParB-like nuclease domain Vc3S01_RS17420 SM01228 Vc3S01_RS17420 Vc3S01_RS17440 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17445 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17465 SM00387 Histidine kinase-like ATPases Vc3S01_RS17465 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS17465 SM00448 cheY-homologous receiver domain Vc3S01_RS17510 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17530 SM00387 Histidine kinase-like ATPases Vc3S01_RS17535 SM00448 cheY-homologous receiver domain Vc3S01_RS17535 SM00850 LytTr DNA-binding domain Vc3S01_RS17550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS17550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS17550 SM01049 Vc3S01_RS17550 Vc3S01_RS17605 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17610 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS17635 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS17650 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS17675 SM00988 UreE urease accessory protein, N-terminal domain Vc3S01_RS17695 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS17700 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17745 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS17760 SM01057 Eukaryotic-type carbonic anhydrase Vc3S01_RS17805 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS17805 SM01009 AlkA N-terminal domain Vc3S01_RS17850 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Vc3S01_RS17850 SM00495 Chitin-binding domain type 3 Vc3S01_RS17850 SM00636 Vc3S01_RS17850 Vc3S01_RS17870 SM00267 diguanylate cyclase Vc3S01_RS17880 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS17905 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17910 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS17935 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17940 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS17950 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS17970 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS17975 SM01217 Vc3S01_RS17975 Vc3S01_RS18000 SM00267 diguanylate cyclase Vc3S01_RS18025 SM00829 Enoylreductase Vc3S01_RS18085 SM00344 helix_turn_helix ASNC type Vc3S01_RS18090 SM00495 Chitin-binding domain type 3 Vc3S01_RS18265 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS18285 SM00347 helix_turn_helix multiple antibiotic resistance protein Vc3S01_RS18325 SM00822 Vc3S01_RS18325 Vc3S01_RS18345 SM00014 Acid phosphatase homologues Vc3S01_RS18375 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS18480 SM00448 cheY-homologous receiver domain Vc3S01_RS18480 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS18485 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS18485 SM00387 Histidine kinase-like ATPases Vc3S01_RS18485 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS18560 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS18600 SM00849 Metallo-beta-lactamase superfamily Vc3S01_RS18630 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS18655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vc3S01_RS18655 SM00091 PAS domain Vc3S01_RS18655 SM00387 Histidine kinase-like ATPases Vc3S01_RS18660 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS18660 SM00448 cheY-homologous receiver domain Vc3S01_RS18745 SM00267 diguanylate cyclase Vc3S01_RS18745 SM01079 Vc3S01_RS18745 Vc3S01_RS18750 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS18760 SM00267 diguanylate cyclase Vc3S01_RS18795 SM01266 Vc3S01_RS18795 Vc3S01_RS18885 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS18895 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS18895 SM00866 Vc3S01_RS18895 Vc3S01_RS18925 SM00631 Vc3S01_RS18925 Vc3S01_RS19005 SM00858 Vc3S01_RS19005 Vc3S01_RS19110 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS19130 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS19245 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS19270 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS19280 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS19285 SM00020 Trypsin-like serine protease Vc3S01_RS19345 SM00481 DNA polymerase alpha chain like domain Vc3S01_RS19360 SM00849 Metallo-beta-lactamase superfamily Vc3S01_RS19395 SM00448 cheY-homologous receiver domain Vc3S01_RS19395 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS19400 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS19410 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS19415 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS19415 SM00267 diguanylate cyclase Vc3S01_RS19425 SM00829 Enoylreductase Vc3S01_RS19435 SM01119 Vc3S01_RS19435 Vc3S01_RS19450 SM00267 diguanylate cyclase Vc3S01_RS19460 SM00829 Enoylreductase Vc3S01_RS19465 SM01057 Eukaryotic-type carbonic anhydrase Vc3S01_RS19500 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS19515 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS19515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS19535 SM00587 ZnF_C4 abd HLH domain containing kinases domain Vc3S01_RS19560 SM00226 Low molecular weight phosphatase family Vc3S01_RS19560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vc3S01_RS19575 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS19600 SM00267 diguanylate cyclase Vc3S01_RS19605 SM00028 Tetratricopeptide repeats Vc3S01_RS19625 SM00422 helix_turn_helix, mercury resistance Vc3S01_RS19635 SM00257 Lysin motif Vc3S01_RS19645 SM00487 DEAD-like helicases superfamily Vc3S01_RS19645 SM00490 helicase superfamily c-terminal domain Vc3S01_RS19675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS19675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS19695 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS19700 SM00267 diguanylate cyclase Vc3S01_RS19710 SM00327 von Willebrand factor (vWF) type A domain Vc3S01_RS19715 SM00327 von Willebrand factor (vWF) type A domain Vc3S01_RS19745 SM00419 helix_turn_helix, cAMP Regulatory protein Vc3S01_RS19750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS19750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS19760 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS19765 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS19775 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS19785 SM01266 Vc3S01_RS19785 Vc3S01_RS19790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vc3S01_RS19790 SM00448 cheY-homologous receiver domain Vc3S01_RS19795 SM00387 Histidine kinase-like ATPases Vc3S01_RS19795 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS19845 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS19850 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS19860 SM00495 Chitin-binding domain type 3 Vc3S01_RS19880 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Vc3S01_RS19880 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS19885 SM00849 Metallo-beta-lactamase superfamily Vc3S01_RS19925 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS19960 SM01060 Vc3S01_RS19960 Vc3S01_RS19970 SM00829 Enoylreductase Vc3S01_RS19980 SM01022 Vc3S01_RS19980 Vc3S01_RS20040 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS20050 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS20090 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS20170 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS20200 SM00729 Elongator protein 3, MiaB family, Radical SAM Vc3S01_RS20225 SM00260 Two component signalling adaptor domain Vc3S01_RS20225 SM00448 cheY-homologous receiver domain Vc3S01_RS20240 SM00642 Alpha-amylase domain Vc3S01_RS20265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vc3S01_RS20335 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS20365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS20365 SM00387 Histidine kinase-like ATPases Vc3S01_RS20365 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS20370 SM00448 cheY-homologous receiver domain Vc3S01_RS20370 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS20385 SM00764 Citrate lyase ligase C-terminal domain Vc3S01_RS20395 SM01065 Starch binding domain Vc3S01_RS20435 SM00563 Phosphate acyltransferases Vc3S01_RS20445 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS20450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS20475 SM00924 MgtE intracellular N domain Vc3S01_RS20575 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS20590 SM00448 cheY-homologous receiver domain Vc3S01_RS20590 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS20595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS20595 SM00387 Histidine kinase-like ATPases Vc3S01_RS20595 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS20605 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS20615 SM00344 helix_turn_helix ASNC type Vc3S01_RS20645 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vc3S01_RS20650 SM00387 Histidine kinase-like ATPases Vc3S01_RS20650 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS20650 SM00448 cheY-homologous receiver domain Vc3S01_RS20945 SM00465 GIY-YIG type nucleases (URI domain) Vc3S01_RS20955 SM00387 Histidine kinase-like ATPases Vc3S01_RS20955 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS20955 SM00448 cheY-homologous receiver domain Vc3S01_RS20970 SM00344 helix_turn_helix ASNC type Vc3S01_RS21020 SM00822 Vc3S01_RS21020 Vc3S01_RS21055 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS21070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS21070 SM00387 Histidine kinase-like ATPases Vc3S01_RS21075 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS21075 SM00448 cheY-homologous receiver domain Vc3S01_RS21115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS21115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS21115 SM01358 Vc3S01_RS21115 Vc3S01_RS21155 SM01322 Vc3S01_RS21155 Vc3S01_RS21160 SM00357 Cold shock protein domain Vc3S01_RS21175 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS21175 SM00267 diguanylate cyclase Vc3S01_RS21195 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS21205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS21205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS21335 SM00267 diguanylate cyclase Vc3S01_RS21340 SM00487 DEAD-like helicases superfamily Vc3S01_RS21340 SM00490 helicase superfamily c-terminal domain Vc3S01_RS21360 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS21365 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS21420 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS21425 SM00316 Ribosomal protein S1-like RNA-binding domain Vc3S01_RS21425 SM00357 Cold shock protein domain Vc3S01_RS21425 SM00955 Vc3S01_RS21425 Vc3S01_RS21430 SM00487 DEAD-like helicases superfamily Vc3S01_RS21430 SM00490 helicase superfamily c-terminal domain Vc3S01_RS21435 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS21435 SM00267 diguanylate cyclase Vc3S01_RS21445 SM00857 Resolvase, N terminal domain Vc3S01_RS21510 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS21515 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS21550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS21550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS21685 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS21715 SM00422 helix_turn_helix, mercury resistance Vc3S01_RS21750 SM00822 Vc3S01_RS21750 Vc3S01_RS21820 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins Vc3S01_RS21860 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS21865 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS21865 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Vc3S01_RS21900 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS21910 SM00893 Electron transfer flavoprotein domain Vc3S01_RS21915 SM00893 Electron transfer flavoprotein domain Vc3S01_RS21925 SM00861 Transketolase, pyrimidine binding domain Vc3S01_RS21985 SM00448 cheY-homologous receiver domain Vc3S01_RS21985 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS21990 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS21995 SM00871 Bacterial transcription activator, effector binding domain Vc3S01_RS22000 SM00098 Alkaline phosphatase homologues Vc3S01_RS22020 SM00028 Tetratricopeptide repeats Vc3S01_RS22020 SM00267 diguanylate cyclase Vc3S01_RS22035 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS22045 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS22065 SM01012 Vc3S01_RS22065 Vc3S01_RS22085 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS22120 SM00331 Sigma factor PP2C-like phosphatases Vc3S01_RS22120 SM00448 cheY-homologous receiver domain Vc3S01_RS22150 SM00636 Vc3S01_RS22150 Vc3S01_RS22160 SM00867 YceI-like domain Vc3S01_RS22170 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Vc3S01_RS22180 SM00267 diguanylate cyclase Vc3S01_RS22180 SM01079 Vc3S01_RS22180 Vc3S01_RS22185 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS22220 SM00028 Tetratricopeptide repeats Vc3S01_RS22305 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS22315 SM00020 Trypsin-like serine protease Vc3S01_RS22385 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS22470 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS22520 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS22535 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS22545 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS22545 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. Vc3S01_RS22555 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS22570 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS22580 SM00495 Chitin-binding domain type 3 Vc3S01_RS22580 SM00636 Vc3S01_RS22580 Vc3S01_RS22610 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. Vc3S01_RS22620 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS22635 SM00487 DEAD-like helicases superfamily Vc3S01_RS22635 SM00490 helicase superfamily c-terminal domain Vc3S01_RS22640 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS22660 SM00867 YceI-like domain Vc3S01_RS22665 SM00116 Domain in cystathionine beta-synthase and other proteins. Vc3S01_RS22710 SM00782 PhnA Zinc-Ribbon Vc3S01_RS22775 SM00271 DnaJ molecular chaperone homology domain Vc3S01_RS22785 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS22785 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. Vc3S01_RS22785 SM00267 diguanylate cyclase Vc3S01_RS22800 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS22815 SM00797 Allophanate hydrolase subunit 2 Vc3S01_RS22820 SM00796 Allophanate hydrolase subunit 1 Vc3S01_RS22835 SM00091 PAS domain Vc3S01_RS22835 SM00267 diguanylate cyclase Vc3S01_RS22835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS22860 SM00881 CoA binding domain Vc3S01_RS22925 SM00448 cheY-homologous receiver domain Vc3S01_RS22925 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS22930 SM00387 Histidine kinase-like ATPases Vc3S01_RS22930 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS22940 SM01002 Alanine dehydrogenase/PNT, C-terminal domain Vc3S01_RS22940 SM01003 Alanine dehydrogenase/PNT, N-terminal domain Vc3S01_RS22955 SM00267 diguanylate cyclase Vc3S01_RS22960 SM00267 diguanylate cyclase Vc3S01_RS22960 SM00448 cheY-homologous receiver domain Vc3S01_RS22970 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS23010 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS23045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vc3S01_RS23050 SM00450 Rhodanese Homology Domain Vc3S01_RS23080 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS23090 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS23090 SM00448 cheY-homologous receiver domain Vc3S01_RS23095 SM00387 Histidine kinase-like ATPases Vc3S01_RS23130 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS23165 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS23190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS23190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS23190 SM01049 Vc3S01_RS23190 Vc3S01_RS23235 SM00267 diguanylate cyclase Vc3S01_RS23270 SM00880 Vc3S01_RS23270 Vc3S01_RS23285 SM00642 Alpha-amylase domain Vc3S01_RS23345 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS23380 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS23415 SM00495 Chitin-binding domain type 3 Vc3S01_RS23415 SM00636 Vc3S01_RS23415 Vc3S01_RS23475 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS23475 SM01086 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS23520 SM00331 Sigma factor PP2C-like phosphatases Vc3S01_RS23520 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain Vc3S01_RS23550 SM00240 Forkhead associated domain Vc3S01_RS23555 SM00220 Serine/Threonine protein kinases, catalytic domain Vc3S01_RS23560 SM00448 cheY-homologous receiver domain Vc3S01_RS23605 SM00953 Vc3S01_RS23605 Vc3S01_RS23615 SM00704 CDGSH-type zinc finger. Function unknown. Vc3S01_RS23625 SM00849 Metallo-beta-lactamase superfamily Vc3S01_RS23635 SM00710 Parallel beta-helix repeats Vc3S01_RS23685 SM00014 Acid phosphatase homologues Vc3S01_RS23715 SM00260 Two component signalling adaptor domain Vc3S01_RS23715 SM00448 cheY-homologous receiver domain Vc3S01_RS23730 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS23730 SM00448 cheY-homologous receiver domain Vc3S01_RS23740 SM00267 diguanylate cyclase Vc3S01_RS23745 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS23745 SM00448 cheY-homologous receiver domain Vc3S01_RS23750 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS23750 SM00448 cheY-homologous receiver domain Vc3S01_RS23755 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS23755 SM00387 Histidine kinase-like ATPases Vc3S01_RS23755 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS23755 SM00448 cheY-homologous receiver domain Vc3S01_RS23760 SM00267 diguanylate cyclase Vc3S01_RS23760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS23820 SM00240 Forkhead associated domain Vc3S01_RS23840 SM00344 helix_turn_helix ASNC type Vc3S01_RS23875 SM00220 Serine/Threonine protein kinases, catalytic domain Vc3S01_RS23910 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS23910 SM01086 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS23915 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS23945 SM00564 beta-propeller repeat Vc3S01_RS23965 SM00387 Histidine kinase-like ATPases Vc3S01_RS23965 SM00448 cheY-homologous receiver domain Vc3S01_RS24010 SM00990 Vc3S01_RS24010 Vc3S01_RS24015 SM00028 Tetratricopeptide repeats Vc3S01_RS24045 SM00046 Diacylglycerol kinase catalytic domain (presumed) Vc3S01_RS24065 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS24115 SM00327 von Willebrand factor (vWF) type A domain Vc3S01_RS24135 SM00028 Tetratricopeptide repeats Vc3S01_RS24150 SM00448 cheY-homologous receiver domain Vc3S01_RS24150 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS24155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS24155 SM00387 Histidine kinase-like ATPases Vc3S01_RS24155 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS24175 SM00073 Histidine Phosphotransfer domain Vc3S01_RS24175 SM00387 Histidine kinase-like ATPases Vc3S01_RS24175 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS24175 SM00448 cheY-homologous receiver domain Vc3S01_RS24185 SM00851 MGS-like domain Vc3S01_RS24220 SM00422 helix_turn_helix, mercury resistance Vc3S01_RS24225 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS24270 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS24290 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS24300 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS24300 SM00267 diguanylate cyclase Vc3S01_RS24390 SM00387 Histidine kinase-like ATPases Vc3S01_RS24390 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS24390 SM00448 cheY-homologous receiver domain Vc3S01_RS24400 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS24400 SM00073 Histidine Phosphotransfer domain Vc3S01_RS24400 SM00387 Histidine kinase-like ATPases Vc3S01_RS24400 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS24400 SM00448 cheY-homologous receiver domain Vc3S01_RS24405 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS24405 SM00448 cheY-homologous receiver domain Vc3S01_RS24410 SM00448 cheY-homologous receiver domain Vc3S01_RS24420 SM00244 prohibitin homologues Vc3S01_RS24430 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS24460 SM00267 diguanylate cyclase Vc3S01_RS24485 SM00458 Ricin-type beta-trefoil Vc3S01_RS24530 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS24585 SM01240 Vc3S01_RS24585 Vc3S01_RS24600 SM00448 cheY-homologous receiver domain Vc3S01_RS24645 SM00852 Probable molybdopterin binding domain Vc3S01_RS24705 SM00450 Rhodanese Homology Domain Vc3S01_RS24710 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS24710 SM00267 diguanylate cyclase Vc3S01_RS24715 SM00636 Vc3S01_RS24715 Vc3S01_RS24740 SM00861 Transketolase, pyrimidine binding domain Vc3S01_RS24745 SM00091 PAS domain Vc3S01_RS24745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS24825 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS24885 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS24885 SM00267 diguanylate cyclase Vc3S01_RS24915 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS24915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS24935 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS24945 SM00481 DNA polymerase alpha chain like domain Vc3S01_RS24995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor Vc3S01_RS25010 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS25060 SM01119 Vc3S01_RS25060 Vc3S01_RS25070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS25070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS25080 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS25105 SM00926 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS25165 SM00422 helix_turn_helix, mercury resistance Vc3S01_RS25185 SM01235 Vc3S01_RS25185 Vc3S01_RS25245 SM00420 helix_turn_helix, Deoxyribose operon repressor Vc3S01_RS25245 SM01134 Vc3S01_RS25245 Vc3S01_RS25270 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS25285 SM00347 helix_turn_helix multiple antibiotic resistance protein Vc3S01_RS25325 SM00357 Cold shock protein domain Vc3S01_RS25345 SM00267 diguanylate cyclase Vc3S01_RS25345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS25380 SM00936 Penicillin-binding protein 5, C-terminal domain Vc3S01_RS25445 SM00822 Vc3S01_RS25445 Vc3S01_RS25490 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS25490 SM00871 Bacterial transcription activator, effector binding domain Vc3S01_RS25540 SM00487 DEAD-like helicases superfamily Vc3S01_RS25540 SM00490 helicase superfamily c-terminal domain Vc3S01_RS25545 SM00849 Metallo-beta-lactamase superfamily Vc3S01_RS25590 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS25625 SM00788 Adenylosuccinate synthetase Vc3S01_RS25635 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS25640 SM00870 Vc3S01_RS25640 Vc3S01_RS25660 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS25670 SM00886 Stress responsive A/B Barrel Domain Vc3S01_RS25680 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS25735 SM00267 diguanylate cyclase Vc3S01_RS25740 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS25745 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS25775 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS25900 SM00155 Phospholipase D. Active site motifs. Vc3S01_RS25915 SM01022 Vc3S01_RS25915 Vc3S01_RS25920 SM00028 Tetratricopeptide repeats Vc3S01_RS25925 SM00422 helix_turn_helix, mercury resistance Vc3S01_RS25940 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Vc3S01_RS25950 SM00838 Elongation factor G C-terminus Vc3S01_RS25950 SM00889 Elongation factor G, domain IV Vc3S01_RS25985 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS26020 SM00062 Bacterial periplasmic substrate-binding proteins Vc3S01_RS26065 SM00248 ankyrin repeats Vc3S01_RS26090 SM00420 helix_turn_helix, Deoxyribose operon repressor Vc3S01_RS26090 SM01134 Vc3S01_RS26090 Vc3S01_RS26180 SM00450 Rhodanese Homology Domain Vc3S01_RS26210 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS26300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) Vc3S01_RS26300 SM00091 PAS domain Vc3S01_RS26300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS26300 SM00387 Histidine kinase-like ATPases Vc3S01_RS26300 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS26300 SM00448 cheY-homologous receiver domain Vc3S01_RS26340 SM00387 Histidine kinase-like ATPases Vc3S01_RS26340 SM00388 His Kinase A (phosphoacceptor) domain Vc3S01_RS26345 SM00448 cheY-homologous receiver domain Vc3S01_RS26345 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS26460 SM00936 Penicillin-binding protein 5, C-terminal domain Vc3S01_RS26475 SM00450 Rhodanese Homology Domain Vc3S01_RS26490 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. Vc3S01_RS26525 SM00226 Low molecular weight phosphatase family Vc3S01_RS26600 SM00642 Alpha-amylase domain Vc3S01_RS26610 SM00642 Alpha-amylase domain Vc3S01_RS26630 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS26740 SM00882 Coenzyme A transferase Vc3S01_RS26745 SM00882 Coenzyme A transferase Vc3S01_RS26760 SM00966 SpoVT / AbrB like domain Vc3S01_RS26780 SM00671 Sel1-like repeats. Vc3S01_RS26785 SM00642 Alpha-amylase domain Vc3S01_RS26795 SM00642 Alpha-amylase domain Vc3S01_RS26815 SM00642 Alpha-amylase domain Vc3S01_RS26820 SM00267 diguanylate cyclase Vc3S01_RS26880 SM00354 helix_turn _helix lactose operon repressor Vc3S01_RS26885 SM00857 Resolvase, N terminal domain Vc3S01_RS26950 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain Vc3S01_RS26955 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS26955 SM00866 Vc3S01_RS26955 Vc3S01_RS26995 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS27015 SM00642 Alpha-amylase domain Vc3S01_RS27020 SM00872 Alpha mannosidase, middle domain Vc3S01_RS27055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS27055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain Vc3S01_RS27110 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS27125 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS27155 SM00347 helix_turn_helix multiple antibiotic resistance protein Vc3S01_RS27240 SM01007 Class II Aldolase and Adducin N-terminal domain Vc3S01_RS27255 SM00420 helix_turn_helix, Deoxyribose operon repressor Vc3S01_RS27255 SM01134 Vc3S01_RS27255 Vc3S01_RS27265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Vc3S01_RS27280 SM00829 Enoylreductase Vc3S01_RS27290 SM00344 helix_turn_helix ASNC type Vc3S01_RS27300 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS27330 SM00487 DEAD-like helicases superfamily Vc3S01_RS27330 SM00490 helicase superfamily c-terminal domain Vc3S01_RS27355 SM00345 helix_turn_helix gluconate operon transcriptional repressor Vc3S01_RS27355 SM00895 Vc3S01_RS27355 Vc3S01_RS27420 SM00634 Bacterial Ig-like domain (group 1) Vc3S01_RS27430 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS27440 SM00344 helix_turn_helix ASNC type Vc3S01_RS27470 SM00360 RNA recognition motif Vc3S01_RS27495 SM00342 helix_turn_helix, arabinose operon control protein Vc3S01_RS27500 SM00421 helix_turn_helix, Lux Regulon Vc3S01_RS27510 SM00387 Histidine kinase-like ATPases Vc3S01_RS27515 SM00448 cheY-homologous receiver domain Vc3S01_RS27530 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS27530 SM00267 diguanylate cyclase Vc3S01_RS27535 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS27625 SM00470 ParB-like nuclease domain Vc3S01_RS27830 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Vc3S01_RS27830 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Vc3S01_RS27830 SM00493 Vc3S01_RS27830 Vc3S01_RS28165 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Vc3S01_RS28165 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Vc3S01_RS28165 SM00493 Vc3S01_RS28165 Vc3S01_RS28245 SM00382 ATPases associated with a variety of cellular activities Vc3S01_RS28860 SM00493 Vc3S01_RS28860 Vc3S01_RS28955 SM00894 Excalibur calcium-binding domain Vc3S01_RS29060 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS29140 SM00052 Putative diguanylate phosphodiesterase Vc3S01_RS29170 SM00862 Transcriptional regulatory protein, C terminal Vc3S01_RS29200 SM00857 Resolvase, N terminal domain Vc3S01_RS29220 SM00857 Resolvase, N terminal domain Vc3S01_RS29305 SM00857 Resolvase, N terminal domain Vc3S01_RS29310 SM00857 Resolvase, N terminal domain Vc3S01_RS29350 SM00857 Resolvase, N terminal domain Vc3S01_RS29465 SM00857 Resolvase, N terminal domain Vc3S01_RS29560 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Vc3S01_RS29560 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Vc3S01_RS29560 SM00493 Vc3S01_RS29560 Vc3S01_RS29640 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS29870 SM00530 Helix-turn-helix XRE-family like proteins Vc3S01_RS29995 SM00271 DnaJ molecular chaperone homology domain Vc3S01_RS30145 SM00966 SpoVT / AbrB like domain Vc3S01_RS30240 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain Vc3S01_RS30240 SM00437 Bacterial DNA topoisomerase I DNA-binding domain Vc3S01_RS30240 SM00493 Vc3S01_RS30240