locus-tag class description Vc3S01_RS00005 PF00258 Flavodoxin Vc3S01_RS00065 PF02384 N-6 DNA Methylase Vc3S01_RS00095 PF00589 Phage integrase family Vc3S01_RS00095 PF02899 Phage integrase, N-terminal SAM-like domain Vc3S01_RS00100 PF10396 GTP-binding protein TrmE N-terminus Vc3S01_RS00100 PF01926 50S ribosome-binding GTPase Vc3S01_RS00100 PF12631 MnmE helical domain Vc3S01_RS00105 PF14849 YidC periplasmic domain Vc3S01_RS00105 PF02096 60Kd inner membrane protein Vc3S01_RS00110 PF01809 Putative membrane protein insertion efficiency factor Vc3S01_RS00115 PF00825 Ribonuclease P Vc3S01_RS00120 PF00468 Ribosomal protein L34 Vc3S01_RS00125 PF00005 ABC transporter Vc3S01_RS00130 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS00135 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS00145 PF11638 DnaA N-terminal domain Vc3S01_RS00145 PF00308 Bacterial dnaA protein Vc3S01_RS00145 PF08299 Bacterial dnaA protein helix-turn-helix Vc3S01_RS00150 PF00712 DNA polymerase III beta subunit, N-terminal domain Vc3S01_RS00150 PF02767 DNA polymerase III beta subunit, central domain Vc3S01_RS00150 PF02768 DNA polymerase III beta subunit, C-terminal domain Vc3S01_RS00155 PF02463 RecF/RecN/SMC N terminal domain Vc3S01_RS00160 PF01751 Toprim domain Vc3S01_RS00160 PF00986 DNA gyrase B subunit, carboxyl terminus Vc3S01_RS00160 PF18053 DNA gyrase B subunit insert domain Vc3S01_RS00160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS00160 PF00204 DNA gyrase B Vc3S01_RS00165 PF00011 Hsp20/alpha crystallin family Vc3S01_RS00170 PF00155 Aminotransferase class I and II Vc3S01_RS00175 PF05746 DALR anticodon binding domain Vc3S01_RS00175 PF02092 Glycyl-tRNA synthetase beta subunit Vc3S01_RS00180 PF02091 Glycyl-tRNA synthetase alpha subunit Vc3S01_RS00185 PF01169 Uncharacterized protein family UPF0016 Vc3S01_RS00195 PF01206 Sulfurtransferase TusA Vc3S01_RS00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS00205 PF03466 LysR substrate binding domain Vc3S01_RS00210 PF08240 Alcohol dehydrogenase GroES-like domain Vc3S01_RS00210 PF00107 Zinc-binding dehydrogenase Vc3S01_RS00215 PF00108 Thiolase, N-terminal domain Vc3S01_RS00215 PF02803 Thiolase, C-terminal domain Vc3S01_RS00220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vc3S01_RS00220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vc3S01_RS00220 PF00378 Enoyl-CoA hydratase/isomerase Vc3S01_RS00225 PF01205 Uncharacterized protein family UPF0029 Vc3S01_RS00225 PF09186 Domain of unknown function (DUF1949) Vc3S01_RS00230 PF02386 Cation transport protein Vc3S01_RS00235 PF12724 Flavodoxin domain Vc3S01_RS00285 PF07731 Multicopper oxidase Vc3S01_RS00285 PF07732 Multicopper oxidase Vc3S01_RS00285 PF00394 Multicopper oxidase Vc3S01_RS00290 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Vc3S01_RS00295 PF01964 Radical SAM ThiC family Vc3S01_RS00295 PF13667 ThiC-associated domain Vc3S01_RS00300 PF02581 Thiamine monophosphate synthase Vc3S01_RS00305 PF00899 ThiF family Vc3S01_RS00310 PF02597 ThiS family Vc3S01_RS00315 PF05690 Thiazole biosynthesis protein ThiG Vc3S01_RS00320 PF04055 Radical SAM superfamily Vc3S01_RS00320 PF06968 Biotin and Thiamin Synthesis associated domain Vc3S01_RS00325 PF01321 Creatinase/Prolidase N-terminal domain Vc3S01_RS00325 PF01321 Creatinase/Prolidase N-terminal domain Vc3S01_RS00325 PF00557 Metallopeptidase family M24 Vc3S01_RS00325 PF00557 Metallopeptidase family M24 Vc3S01_RS00330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS00330 PF03466 LysR substrate binding domain Vc3S01_RS00335 PF07690 Major Facilitator Superfamily Vc3S01_RS00355 PF05114 Protein of unknown function (DUF692) Vc3S01_RS00365 PF13361 UvrD-like helicase C-terminal domain Vc3S01_RS00365 PF00580 UvrD/REP helicase N-terminal domain Vc3S01_RS00375 PF01810 LysE type translocator Vc3S01_RS00395 PF00892 EamA-like transporter family Vc3S01_RS00400 PF00270 DEAD/DEAH box helicase Vc3S01_RS00400 PF09382 RQC domain Vc3S01_RS00400 PF16124 RecQ zinc-binding Vc3S01_RS00400 PF00570 HRDC domain Vc3S01_RS00400 PF00271 Helicase conserved C-terminal domain Vc3S01_RS00410 PF02592 Putative vitamin uptake transporter Vc3S01_RS00415 PF02541 Ppx/GppA phosphatase family Vc3S01_RS00420 PF00270 DEAD/DEAH box helicase Vc3S01_RS00420 PF00271 Helicase conserved C-terminal domain Vc3S01_RS00425 PF00085 Thioredoxin Vc3S01_RS00430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vc3S01_RS00430 PF07497 Rho termination factor, RNA-binding domain Vc3S01_RS00430 PF07498 Rho termination factor, N-terminal domain Vc3S01_RS00440 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Vc3S01_RS00445 PF00111 2Fe-2S iron-sulfur cluster binding domain Vc3S01_RS00450 PF00175 Oxidoreductase NAD-binding domain Vc3S01_RS00485 PF07219 HemY protein N-terminus Vc3S01_RS00490 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase Vc3S01_RS00495 PF02602 Uroporphyrinogen-III synthase HemD Vc3S01_RS00500 PF03900 Porphobilinogen deaminase, C-terminal domain Vc3S01_RS00500 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Vc3S01_RS00505 PF01295 Adenylate cyclase, class-I Vc3S01_RS00505 PF12633 Adenylate cyclase NT domain Vc3S01_RS00510 PF01491 Frataxin-like domain Vc3S01_RS00520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Vc3S01_RS00520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Vc3S01_RS00525 PF01678 Diaminopimelate epimerase Vc3S01_RS00535 PF00589 Phage integrase family Vc3S01_RS00535 PF02899 Phage integrase, N-terminal SAM-like domain Vc3S01_RS00540 PF13419 Haloacid dehalogenase-like hydrolase Vc3S01_RS00545 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS00545 PF08495 FIST N domain Vc3S01_RS00545 PF00563 EAL domain Vc3S01_RS00545 PF10442 FIST C domain Vc3S01_RS00550 PF03942 DTW domain Vc3S01_RS00570 PF12146 Serine aminopeptidase, S33 Vc3S01_RS00575 PF01810 LysE type translocator Vc3S01_RS00580 PF08668 HDOD domain Vc3S01_RS00580 PF00563 EAL domain Vc3S01_RS00585 PF01022 Bacterial regulatory protein, arsR family Vc3S01_RS00590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vc3S01_RS00590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vc3S01_RS00615 PF10694 Protein of unknown function (DUF2500) Vc3S01_RS00645 PF01914 MarC family integral membrane protein Vc3S01_RS00660 PF02881 SRP54-type protein, helical bundle domain Vc3S01_RS00660 PF00448 SRP54-type protein, GTPase domain Vc3S01_RS00665 PF00005 ABC transporter Vc3S01_RS00670 PF18075 FtsX extracellular domain Vc3S01_RS00675 PF04545 Sigma-70, region 4 Vc3S01_RS00675 PF04542 Sigma-70 region 2 Vc3S01_RS00675 PF00140 Sigma-70 factor, region 1.2 Vc3S01_RS00685 PF00581 Rhodanese-like domain Vc3S01_RS00690 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease Vc3S01_RS00690 PF01694 Rhomboid family Vc3S01_RS00695 PF03748 Flagellar basal body-associated protein FliL Vc3S01_RS00700 PF04345 Chorismate lyase Vc3S01_RS00705 PF01040 UbiA prenyltransferase family Vc3S01_RS00710 PF01553 Acyltransferase Vc3S01_RS00720 PF00717 Peptidase S24-like Vc3S01_RS00720 PF01726 LexA DNA binding domain Vc3S01_RS00730 PF01554 MatE Vc3S01_RS00735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vc3S01_RS00735 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS00740 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS00750 PF05958 tRNA (Uracil-5-)-methyltransferase Vc3S01_RS00755 PF07715 TonB-dependent Receptor Plug Domain Vc3S01_RS00755 PF00593 TonB dependent receptor Vc3S01_RS00765 PF01177 Asp/Glu/Hydantoin racemase Vc3S01_RS00835 PF13091 PLD-like domain Vc3S01_RS00845 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Vc3S01_RS00845 PF01565 FAD binding domain Vc3S01_RS00850 PF03099 Biotin/lipoate A/B protein ligase family Vc3S01_RS00850 PF08279 HTH domain Vc3S01_RS00850 PF02237 Biotin protein ligase C terminal domain Vc3S01_RS00855 PF00485 Phosphoribulokinase / Uridine kinase family Vc3S01_RS00885 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS00885 PF03144 Elongation factor Tu domain 2 Vc3S01_RS00885 PF03143 Elongation factor Tu C-terminal domain Vc3S01_RS00895 PF00584 SecE/Sec61-gamma subunits of protein translocation complex Vc3S01_RS00900 PF02357 Transcription termination factor nusG Vc3S01_RS00900 PF00467 KOW motif Vc3S01_RS00905 PF00298 Ribosomal protein L11, RNA binding domain Vc3S01_RS00905 PF03946 Ribosomal protein L11, N-terminal domain Vc3S01_RS00910 PF00687 Ribosomal protein L1p/L10e family Vc3S01_RS00915 PF00466 Ribosomal protein L10 Vc3S01_RS00920 PF16320 Ribosomal protein L7/L12 dimerisation domain Vc3S01_RS00920 PF00542 Ribosomal protein L7/L12 C-terminal domain Vc3S01_RS00925 PF04561 RNA polymerase Rpb2, domain 2 Vc3S01_RS00925 PF04563 RNA polymerase beta subunit Vc3S01_RS00925 PF10385 RNA polymerase beta subunit external 1 domain Vc3S01_RS00925 PF04560 RNA polymerase Rpb2, domain 7 Vc3S01_RS00925 PF04565 RNA polymerase Rpb2, domain 3 Vc3S01_RS00925 PF00562 RNA polymerase Rpb2, domain 6 Vc3S01_RS00930 PF04998 RNA polymerase Rpb1, domain 5 Vc3S01_RS00930 PF05000 RNA polymerase Rpb1, domain 4 Vc3S01_RS00930 PF04983 RNA polymerase Rpb1, domain 3 Vc3S01_RS00930 PF04997 RNA polymerase Rpb1, domain 1 Vc3S01_RS00930 PF00623 RNA polymerase Rpb1, domain 2 Vc3S01_RS00940 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ Vc3S01_RS00945 PF09297 NADH pyrophosphatase zinc ribbon domain Vc3S01_RS00945 PF00293 NUDIX domain Vc3S01_RS00960 PF01208 Uroporphyrinogen decarboxylase (URO-D) Vc3S01_RS00965 PF03167 Uracil DNA glycosylase superfamily Vc3S01_RS00970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vc3S01_RS00975 PF04222 Protein of unknown function (DUF416) Vc3S01_RS00980 PF01595 Cyclin M transmembrane N-terminal domain Vc3S01_RS00980 PF00571 CBS domain Vc3S01_RS00985 PF00216 Bacterial DNA-binding protein Vc3S01_RS00995 PF02844 Phosphoribosylglycinamide synthetase, N domain Vc3S01_RS00995 PF02843 Phosphoribosylglycinamide synthetase, C domain Vc3S01_RS00995 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Vc3S01_RS01000 PF02142 MGS-like domain Vc3S01_RS01000 PF01808 AICARFT/IMPCHase bienzyme Vc3S01_RS01010 PF13411 MerR HTH family regulatory protein Vc3S01_RS01015 PF18500 CadC C-terminal domain 1 Vc3S01_RS01015 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS01025 PF13520 Amino acid permease Vc3S01_RS01030 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Vc3S01_RS01030 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Vc3S01_RS01030 PF01276 Orn/Lys/Arg decarboxylase, major domain Vc3S01_RS01075 PF08448 PAS fold Vc3S01_RS01075 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS01080 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS01085 PF01207 Dihydrouridine synthase (Dus) Vc3S01_RS01095 PF00289 Biotin carboxylase, N-terminal domain Vc3S01_RS01095 PF02785 Biotin carboxylase C-terminal domain Vc3S01_RS01095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vc3S01_RS01100 PF00364 Biotin-requiring enzyme Vc3S01_RS01105 PF01220 Dehydroquinase class II Vc3S01_RS01110 PF16177 Acetyl-coenzyme A synthetase N-terminus Vc3S01_RS01110 PF00501 AMP-binding enzyme Vc3S01_RS01110 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS01125 PF12832 MFS_1 like family Vc3S01_RS01130 PF00072 Response regulator receiver domain Vc3S01_RS01130 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS01130 PF01627 Hpt domain Vc3S01_RS01130 PF00672 HAMP domain Vc3S01_RS01135 PF00206 Lyase Vc3S01_RS01135 PF10415 Fumarase C C-terminus Vc3S01_RS01150 PF00474 Sodium:solute symporter family Vc3S01_RS01160 PF01914 MarC family integral membrane protein Vc3S01_RS01165 PF00072 Response regulator receiver domain Vc3S01_RS01165 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS01170 PF11412 Disulphide bond corrector protein DsbC Vc3S01_RS01170 PF02683 Cytochrome C biogenesis protein transmembrane region Vc3S01_RS01175 PF03605 Anaerobic c4-dicarboxylate membrane transporter Vc3S01_RS01180 PF00206 Lyase Vc3S01_RS01180 PF10415 Fumarase C C-terminus Vc3S01_RS01185 PF04186 FxsA cytoplasmic membrane protein Vc3S01_RS01190 PF00588 SpoU rRNA Methylase family Vc3S01_RS01195 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Vc3S01_RS01195 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Vc3S01_RS01200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS01200 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS01200 PF16527 Two-component sensor protein CpxA, periplasmic domain Vc3S01_RS01200 PF00672 HAMP domain Vc3S01_RS01205 PF00072 Response regulator receiver domain Vc3S01_RS01205 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS01215 PF16916 Dimerisation domain of Zinc Transporter Vc3S01_RS01215 PF01545 Cation efflux family Vc3S01_RS01220 PF00365 Phosphofructokinase Vc3S01_RS01225 PF01554 MatE Vc3S01_RS01230 PF00166 Chaperonin 10 Kd subunit Vc3S01_RS01235 PF00118 TCP-1/cpn60 chaperonin family Vc3S01_RS01245 PF02308 MgtC family Vc3S01_RS01250 PF04055 Radical SAM superfamily Vc3S01_RS01255 PF01132 Elongation factor P (EF-P) OB domain Vc3S01_RS01255 PF09285 Elongation factor P, C-terminal Vc3S01_RS01255 PF08207 Elongation factor P (EF-P) KOW-like domain Vc3S01_RS01270 PF02313 Fumarate reductase subunit D Vc3S01_RS01275 PF02300 Fumarate reductase subunit C Vc3S01_RS01280 PF13183 4Fe-4S dicluster domain Vc3S01_RS01280 PF13085 2Fe-2S iron-sulfur cluster binding domain Vc3S01_RS01285 PF00890 FAD binding domain Vc3S01_RS01285 PF02910 Fumarate reductase flavoprotein C-term Vc3S01_RS01290 PF00152 tRNA synthetases class II (D, K and N) Vc3S01_RS01300 PF08360 QacR-like protein, C-terminal region Vc3S01_RS01300 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS01310 PF01551 Peptidase family M23 Vc3S01_RS01315 PF00132 Bacterial transferase hexapeptide (six repeats) Vc3S01_RS01315 PF06426 Serine acetyltransferase, N-terminal Vc3S01_RS01320 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Vc3S01_RS01320 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Vc3S01_RS01325 PF02556 Preprotein translocase subunit SecB Vc3S01_RS01330 PF00581 Rhodanese-like domain Vc3S01_RS01335 PF06415 BPG-independent PGAM N-terminus (iPGM_N) Vc3S01_RS01335 PF01676 Metalloenzyme superfamily Vc3S01_RS01345 PF00672 HAMP domain Vc3S01_RS01345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS01350 PF00939 Sodium:sulfate symporter transmembrane region Vc3S01_RS01355 PF02666 Phosphatidylserine decarboxylase Vc3S01_RS01360 PF03193 RsgA GTPase Vc3S01_RS01365 PF00929 Exonuclease Vc3S01_RS01435 PF08331 Domain of unknown function (DUF1730) Vc3S01_RS01440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Vc3S01_RS01445 PF01520 N-acetylmuramoyl-L-alanine amidase Vc3S01_RS01450 PF01119 DNA mismatch repair protein, C-terminal domain Vc3S01_RS01450 PF08676 MutL C terminal dimerisation domain Vc3S01_RS01460 PF17209 Hfq protein Vc3S01_RS01465 PF13167 GTP-binding GTPase N-terminal Vc3S01_RS01465 PF16360 GTP-binding GTPase Middle Region Vc3S01_RS01465 PF01926 50S ribosome-binding GTPase Vc3S01_RS01470 PF01145 SPFH domain / Band 7 family Vc3S01_RS01470 PF12221 Bacterial membrane protein N terminal Vc3S01_RS01475 PF01145 SPFH domain / Band 7 family Vc3S01_RS01480 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) Vc3S01_RS01485 PF00709 Adenylosuccinate synthetase Vc3S01_RS01495 PF08238 Sel1 repeat Vc3S01_RS01500 PF00970 Oxidoreductase FAD-binding domain Vc3S01_RS01500 PF00175 Oxidoreductase NAD-binding domain Vc3S01_RS01500 PF00042 Globin Vc3S01_RS01505 PF02082 Transcriptional regulator Vc3S01_RS01510 PF08461 Ribonuclease R winged-helix domain Vc3S01_RS01510 PF00575 S1 RNA binding domain Vc3S01_RS01510 PF00773 RNB domain Vc3S01_RS01510 PF08206 Ribonuclease B OB domain Vc3S01_RS01510 PF17876 Cold shock domain Vc3S01_RS01515 PF00588 SpoU rRNA Methylase family Vc3S01_RS01515 PF08032 RNA 2'-O ribose methyltransferase substrate binding Vc3S01_RS01520 PF13419 Haloacid dehalogenase-like hydrolase Vc3S01_RS01525 PF00579 tRNA synthetases class I (W and Y) Vc3S01_RS01540 PF00117 Glutamine amidotransferase class-I Vc3S01_RS01550 PF04958 Arginine N-succinyltransferase beta subunit Vc3S01_RS01555 PF00171 Aldehyde dehydrogenase family Vc3S01_RS01565 PF00027 Cyclic nucleotide-binding domain Vc3S01_RS01565 PF13545 Crp-like helix-turn-helix domain Vc3S01_RS01570 PF00485 Phosphoribulokinase / Uridine kinase family Vc3S01_RS01575 PF06794 Uncharacterised protein family (UPF0270) Vc3S01_RS01580 PF00561 alpha/beta hydrolase fold Vc3S01_RS01590 PF12848 ABC transporter Vc3S01_RS01590 PF00005 ABC transporter Vc3S01_RS01595 PF02525 Flavodoxin-like fold Vc3S01_RS01600 PF02254 TrkA-N domain Vc3S01_RS01600 PF00999 Sodium/hydrogen exchanger family Vc3S01_RS01610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vc3S01_RS01620 PF01112 Asparaginase Vc3S01_RS01625 PF04102 SlyX Vc3S01_RS01635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vc3S01_RS01635 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vc3S01_RS01640 PF08348 YheO-like PAS domain Vc3S01_RS01640 PF13309 HTH domain Vc3S01_RS01645 PF02635 DsrE/DsrF-like family Vc3S01_RS01650 PF02635 DsrE/DsrF-like family Vc3S01_RS01655 PF04077 DsrH like protein Vc3S01_RS01660 PF00164 Ribosomal protein S12/S23 Vc3S01_RS01665 PF00177 Ribosomal protein S7p/S5e Vc3S01_RS01670 PF14492 Elongation Factor G, domain II Vc3S01_RS01670 PF00679 Elongation factor G C-terminus Vc3S01_RS01670 PF03764 Elongation factor G, domain IV Vc3S01_RS01670 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS01670 PF03144 Elongation factor Tu domain 2 Vc3S01_RS01675 PF03144 Elongation factor Tu domain 2 Vc3S01_RS01675 PF03143 Elongation factor Tu C-terminal domain Vc3S01_RS01675 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS01680 PF04324 BFD-like [2Fe-2S] binding domain Vc3S01_RS01685 PF00210 Ferritin-like domain Vc3S01_RS01690 PF03949 Malic enzyme, NAD binding domain Vc3S01_RS01690 PF00390 Malic enzyme, N-terminal domain Vc3S01_RS01695 PF01340 Met Apo-repressor, MetJ Vc3S01_RS01700 PF01053 Cys/Met metabolism PLP-dependent enzyme Vc3S01_RS01705 PF03447 Homoserine dehydrogenase, NAD binding domain Vc3S01_RS01705 PF00696 Amino acid kinase family Vc3S01_RS01705 PF00742 Homoserine dehydrogenase Vc3S01_RS01710 PF02219 Methylenetetrahydrofolate reductase Vc3S01_RS01720 PF00311 Phosphoenolpyruvate carboxylase Vc3S01_RS01725 PF07687 Peptidase dimerisation domain Vc3S01_RS01725 PF01546 Peptidase family M20/M25/M40 Vc3S01_RS01730 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vc3S01_RS01730 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vc3S01_RS01735 PF00696 Amino acid kinase family Vc3S01_RS01740 PF00764 Arginosuccinate synthase Vc3S01_RS01745 PF14698 Argininosuccinate lyase C-terminal Vc3S01_RS01745 PF00206 Lyase Vc3S01_RS01745 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS01760 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS01760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vc3S01_RS01765 PF08534 Redoxin Vc3S01_RS01765 PF00462 Glutaredoxin Vc3S01_RS01770 PF03466 LysR substrate binding domain Vc3S01_RS01770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS01775 PF00905 Penicillin binding protein transpeptidase domain Vc3S01_RS01775 PF17092 Penicillin-binding protein OB-like domain Vc3S01_RS01775 PF00912 Transglycosylase Vc3S01_RS01795 PF04351 Pilus assembly protein, PilP Vc3S01_RS01800 PF11741 AMIN domain Vc3S01_RS01800 PF00263 Bacterial type II and III secretion system protein Vc3S01_RS01800 PF03958 Bacterial type II/III secretion system short domain Vc3S01_RS01800 PF07660 Secretin and TonB N terminus short domain Vc3S01_RS01805 PF01202 Shikimate kinase Vc3S01_RS01810 PF01761 3-dehydroquinate synthase Vc3S01_RS01820 PF02086 D12 class N6 adenine-specific DNA methyltransferase Vc3S01_RS01825 PF00834 Ribulose-phosphate 3 epimerase family Vc3S01_RS01830 PF01250 Ribosomal protein S6 Vc3S01_RS01835 PF00436 Single-strand binding protein family Vc3S01_RS01840 PF01084 Ribosomal protein S18 Vc3S01_RS01845 PF01281 Ribosomal protein L9, N-terminal domain Vc3S01_RS01845 PF03948 Ribosomal protein L9, C-terminal domain Vc3S01_RS01855 PF00772 DnaB-like helicase N terminal domain Vc3S01_RS01855 PF03796 DnaB-like helicase C terminal domain Vc3S01_RS01860 PF01168 Alanine racemase, N-terminal domain Vc3S01_RS01860 PF00842 Alanine racemase, C-terminal domain Vc3S01_RS01870 PF01894 Uncharacterised protein family UPF0047 Vc3S01_RS01875 PF00342 Phosphoglucose isomerase Vc3S01_RS01885 PF01475 Ferric uptake regulator family Vc3S01_RS01955 PF06122 Conjugative relaxosome accessory transposon protein Vc3S01_RS01990 PF02796 Helix-turn-helix domain of resolvase Vc3S01_RS01990 PF00239 Resolvase, N terminal domain Vc3S01_RS01995 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS01995 PF17862 AAA+ lid domain Vc3S01_RS01995 PF01434 Peptidase family M41 Vc3S01_RS01995 PF06480 FtsH Extracellular Vc3S01_RS02015 PF01207 Dihydrouridine synthase (Dus) Vc3S01_RS02035 PF00175 Oxidoreductase NAD-binding domain Vc3S01_RS02035 PF00667 FAD binding domain Vc3S01_RS02035 PF00258 Flavodoxin Vc3S01_RS02040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vc3S01_RS02040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vc3S01_RS02045 PF01507 Phosphoadenosine phosphosulfate reductase family Vc3S01_RS02105 PF00999 Sodium/hydrogen exchanger family Vc3S01_RS02110 PF00809 Pterin binding enzyme Vc3S01_RS02110 PF02965 Vitamin B12 dependent methionine synthase, activation domain Vc3S01_RS02110 PF02607 B12 binding domain Vc3S01_RS02110 PF02310 B12 binding domain Vc3S01_RS02110 PF02574 Homocysteine S-methyltransferase Vc3S01_RS02115 PF01842 ACT domain Vc3S01_RS02115 PF00696 Amino acid kinase family Vc3S01_RS02125 PF00266 Aminotransferase class-V Vc3S01_RS02135 PF17760 UvrA interaction domain Vc3S01_RS02135 PF17755 UvrA DNA-binding domain Vc3S01_RS02135 PF00005 ABC transporter Vc3S01_RS02140 PF00483 Nucleotidyl transferase Vc3S01_RS02145 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS02150 PF00436 Single-strand binding protein family Vc3S01_RS02155 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS02155 PF17157 Gammaproteobacterial periplasmic sensor domain Vc3S01_RS02155 PF00563 EAL domain Vc3S01_RS02175 PF03958 Bacterial type II/III secretion system short domain Vc3S01_RS02175 PF00263 Bacterial type II and III secretion system protein Vc3S01_RS02180 PF13401 AAA domain Vc3S01_RS02180 PF01471 Putative peptidoglycan binding domain Vc3S01_RS02190 PF00437 Type II/IV secretion system protein Vc3S01_RS02190 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Vc3S01_RS02195 PF00482 Type II secretion system (T2SS), protein F Vc3S01_RS02205 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS02220 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS02245 PF04085 rod shape-determining protein MreC Vc3S01_RS02250 PF04093 rod shape-determining protein MreD Vc3S01_RS02255 PF02545 Maf-like protein Vc3S01_RS02260 PF00575 S1 RNA binding domain Vc3S01_RS02260 PF10150 Ribonuclease E/G family Vc3S01_RS02265 PF13502 AsmA-like C-terminal region Vc3S01_RS02265 PF13116 Protein of unknown function Vc3S01_RS02270 PF00795 Carbon-nitrogen hydrolase Vc3S01_RS02275 PF01523 Putative modulator of DNA gyrase Vc3S01_RS02280 PF13638 PIN domain Vc3S01_RS02280 PF02562 PhoH-like protein Vc3S01_RS02285 PF18339 RapA N-terminal Tudor like domain 1 Vc3S01_RS02285 PF12137 RNA polymerase recycling family C-terminal Vc3S01_RS02285 PF00176 SNF2 family N-terminal domain Vc3S01_RS02285 PF18337 RapA N-terminal Tudor like domain Vc3S01_RS02285 PF00271 Helicase conserved C-terminal domain Vc3S01_RS02295 PF00849 RNA pseudouridylate synthase Vc3S01_RS02300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vc3S01_RS02300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vc3S01_RS02305 PF04751 Protein of unknown function (DUF615) Vc3S01_RS02310 PF01523 Putative modulator of DNA gyrase Vc3S01_RS02315 PF01769 Divalent cation transporter Vc3S01_RS02315 PF00571 CBS domain Vc3S01_RS02315 PF03448 MgtE intracellular N domain Vc3S01_RS02320 PF00381 PTS HPr component phosphorylation site Vc3S01_RS02325 PF03668 P-loop ATPase protein family Vc3S01_RS02330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vc3S01_RS02335 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Vc3S01_RS02340 PF04963 Sigma-54 factor, core binding domain Vc3S01_RS02340 PF04552 Sigma-54, DNA binding domain Vc3S01_RS02340 PF00309 Sigma-54 factor, Activator interacting domain (AID) Vc3S01_RS02345 PF12399 Branched-chain amino acid ATP-binding cassette transporter Vc3S01_RS02345 PF00005 ABC transporter Vc3S01_RS02350 PF03968 OstA-like protein Vc3S01_RS02360 PF01380 SIS domain Vc3S01_RS02360 PF00571 CBS domain Vc3S01_RS02365 PF01699 Sodium/calcium exchanger protein Vc3S01_RS02370 PF00005 ABC transporter Vc3S01_RS02375 PF02405 Permease MlaE Vc3S01_RS02380 PF02470 MlaD protein Vc3S01_RS02385 PF05494 MlaC protein Vc3S01_RS02395 PF01722 BolA-like protein Vc3S01_RS02400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Vc3S01_RS02405 PF01553 Acyltransferase Vc3S01_RS02410 PF01042 Endoribonuclease L-PSP Vc3S01_RS02415 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain Vc3S01_RS02415 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain Vc3S01_RS02420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vc3S01_RS02420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vc3S01_RS02430 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Vc3S01_RS02430 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Vc3S01_RS02440 PF06877 Regulator of ribonuclease activity B Vc3S01_RS02450 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS02460 PF08264 Anticodon-binding domain of tRNA Vc3S01_RS02460 PF00133 tRNA synthetases class I (I, L, M and V) Vc3S01_RS02460 PF10458 Valyl tRNA synthetase tRNA binding arm Vc3S01_RS02465 PF04364 DNA polymerase III chi subunit, HolC Vc3S01_RS02470 PF00883 Cytosol aminopeptidase family, catalytic domain Vc3S01_RS02470 PF02789 Cytosol aminopeptidase family, N-terminal domain Vc3S01_RS02475 PF03739 Lipopolysaccharide export system permease LptF/LptG Vc3S01_RS02480 PF03739 Lipopolysaccharide export system permease LptF/LptG Vc3S01_RS02490 PF00106 short chain dehydrogenase Vc3S01_RS02500 PF01522 Polysaccharide deacetylase Vc3S01_RS02505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vc3S01_RS02510 PF02378 Phosphotransferase system, EIIC Vc3S01_RS02515 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit Vc3S01_RS02520 PF02056 Family 4 glycosyl hydrolase Vc3S01_RS02520 PF11975 Family 4 glycosyl hydrolase C-terminal domain Vc3S01_RS02525 PF04794 YdjC-like protein Vc3S01_RS02530 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS02535 PF00072 Response regulator receiver domain Vc3S01_RS02580 PF00171 Aldehyde dehydrogenase family Vc3S01_RS02610 PF00672 HAMP domain Vc3S01_RS02610 PF17200 Single Cache domain 2 Vc3S01_RS02610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS02650 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain Vc3S01_RS02650 PF01464 Transglycosylase SLT domain Vc3S01_RS02655 PF04362 Bacterial Fe(2+) trafficking Vc3S01_RS02660 PF00633 Helix-hairpin-helix motif Vc3S01_RS02660 PF00730 HhH-GPD superfamily base excision DNA repair protein Vc3S01_RS02660 PF14815 NUDIX domain Vc3S01_RS02665 PF02390 Putative methyltransferase Vc3S01_RS02670 PF02086 D12 class N6 adenine-specific DNA methyltransferase Vc3S01_RS02675 PF04960 Glutaminase Vc3S01_RS02680 PF04055 Radical SAM superfamily Vc3S01_RS02680 PF06969 HemN C-terminal domain Vc3S01_RS02685 PF01725 Ham1 family Vc3S01_RS02695 PF02594 Uncharacterised ACR, YggU family COG1872 Vc3S01_RS02700 PF02325 YGGT family Vc3S01_RS02705 PF14748 Pyrroline-5-carboxylate reductase dimerisation Vc3S01_RS02705 PF03807 NADP oxidoreductase coenzyme F420-dependent Vc3S01_RS02710 PF01168 Alanine racemase, N-terminal domain Vc3S01_RS02715 PF00437 Type II/IV secretion system protein Vc3S01_RS02720 PF00437 Type II/IV secretion system protein Vc3S01_RS02725 PF03652 Holliday junction resolvase Vc3S01_RS02730 PF02622 Uncharacterized ACR, COG1678 Vc3S01_RS02735 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Vc3S01_RS02735 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Vc3S01_RS02740 PF04452 RNA methyltransferase Vc3S01_RS02745 PF04231 Endonuclease I Vc3S01_RS02750 PF10263 SprT-like family Vc3S01_RS02750 PF17283 SprT-like zinc ribbon domain Vc3S01_RS02760 PF00438 S-adenosylmethionine synthetase, N-terminal domain Vc3S01_RS02760 PF02772 S-adenosylmethionine synthetase, central domain Vc3S01_RS02760 PF02773 S-adenosylmethionine synthetase, C-terminal domain Vc3S01_RS02765 PF00456 Transketolase, thiamine diphosphate binding domain Vc3S01_RS02765 PF02780 Transketolase, C-terminal domain Vc3S01_RS02765 PF02779 Transketolase, pyrimidine binding domain Vc3S01_RS02775 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vc3S01_RS02775 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vc3S01_RS02780 PF00162 Phosphoglycerate kinase Vc3S01_RS02785 PF01116 Fructose-bisphosphate aldolase class-II Vc3S01_RS02790 PF00924 Mechanosensitive ion channel Vc3S01_RS02790 PF05552 Conserved TM helix Vc3S01_RS02800 PF01810 LysE type translocator Vc3S01_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS02805 PF03466 LysR substrate binding domain Vc3S01_RS02810 PF04402 Protein of unknown function (DUF541) Vc3S01_RS02815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vc3S01_RS02815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vc3S01_RS02815 PF01842 ACT domain Vc3S01_RS02820 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Vc3S01_RS02825 PF01812 5-formyltetrahydrofolate cyclo-ligase family Vc3S01_RS02835 PF05164 Cell division protein ZapA Vc3S01_RS02840 PF03695 Uncharacterised protein family (UPF0149) Vc3S01_RS02845 PF01494 FAD binding domain Vc3S01_RS02850 PF01494 FAD binding domain Vc3S01_RS02870 PF03937 Flavinator of succinate dehydrogenase Vc3S01_RS02880 PF02910 Fumarate reductase flavoprotein C-term Vc3S01_RS02880 PF00890 FAD binding domain Vc3S01_RS02885 PF08281 Sigma-70, region 4 Vc3S01_RS02885 PF04542 Sigma-70 region 2 Vc3S01_RS02890 PF03872 Anti sigma-E protein RseA, N-terminal domain Vc3S01_RS02890 PF03873 Anti sigma-E protein RseA, C-terminal domain Vc3S01_RS02895 PF17188 MucB/RseB C-terminal domain Vc3S01_RS02895 PF03888 MucB/RseB N-terminal domain Vc3S01_RS02905 PF06421 GTP-binding protein LepA C-terminus Vc3S01_RS02905 PF03144 Elongation factor Tu domain 2 Vc3S01_RS02905 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS02905 PF00679 Elongation factor G C-terminus Vc3S01_RS02910 PF10502 Signal peptidase, peptidase S26 Vc3S01_RS02915 PF14622 Ribonuclease-III-like Vc3S01_RS02915 PF00035 Double-stranded RNA binding motif Vc3S01_RS02920 PF07650 KH domain Vc3S01_RS02920 PF01926 50S ribosome-binding GTPase Vc3S01_RS02925 PF11967 Recombination protein O N terminal Vc3S01_RS02925 PF02565 Recombination protein O C terminal Vc3S01_RS02930 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Vc3S01_RS02935 PF01648 4'-phosphopantetheinyl transferase superfamily Vc3S01_RS02940 PF00672 HAMP domain Vc3S01_RS02940 PF01627 Hpt domain Vc3S01_RS02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS02940 PF00072 Response regulator receiver domain Vc3S01_RS02940 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vc3S01_RS02940 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS02950 PF01938 TRAM domain Vc3S01_RS02950 PF05958 tRNA (Uracil-5-)-methyltransferase Vc3S01_RS02955 PF02824 TGS domain Vc3S01_RS02955 PF04607 Region found in RelA / SpoT proteins Vc3S01_RS02955 PF13291 ACT domain Vc3S01_RS02960 PF03819 MazG nucleotide pyrophosphohydrolase domain Vc3S01_RS02965 PF06418 CTP synthase N-terminus Vc3S01_RS02965 PF00117 Glutamine amidotransferase class-I Vc3S01_RS02970 PF03952 Enolase, N-terminal domain Vc3S01_RS02970 PF00113 Enolase, C-terminal TIM barrel domain Vc3S01_RS02975 PF04977 Septum formation initiator Vc3S01_RS02980 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Vc3S01_RS02985 PF02542 YgbB family Vc3S01_RS02990 PF01142 tRNA pseudouridine synthase D (TruD) Vc3S01_RS02995 PF01975 Survival protein SurE Vc3S01_RS03005 PF01551 Peptidase family M23 Vc3S01_RS03005 PF01476 LysM domain Vc3S01_RS03010 PF00140 Sigma-70 factor, region 1.2 Vc3S01_RS03010 PF04542 Sigma-70 region 2 Vc3S01_RS03010 PF04539 Sigma-70 region 3 Vc3S01_RS03010 PF04545 Sigma-70, region 4 Vc3S01_RS03015 PF05190 MutS family domain IV Vc3S01_RS03015 PF01624 MutS domain I Vc3S01_RS03015 PF00488 MutS domain V Vc3S01_RS03015 PF05188 MutS domain II Vc3S01_RS03015 PF05192 MutS domain III Vc3S01_RS03020 PF02464 Competence-damaged protein Vc3S01_RS03025 PF00154 recA bacterial DNA recombination protein Vc3S01_RS03030 PF02631 RecX family Vc3S01_RS03035 PF02272 DHHA1 domain Vc3S01_RS03035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vc3S01_RS03035 PF01411 tRNA synthetases class II (A) Vc3S01_RS03040 PF13840 ACT domain Vc3S01_RS03040 PF01842 ACT domain Vc3S01_RS03040 PF00696 Amino acid kinase family Vc3S01_RS03045 PF02599 Global regulator protein family Vc3S01_RS03100 PF04277 Oxaloacetate decarboxylase, gamma chain Vc3S01_RS03105 PF00682 HMGL-like Vc3S01_RS03105 PF02436 Conserved carboxylase domain Vc3S01_RS03105 PF00364 Biotin-requiring enzyme Vc3S01_RS03110 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit Vc3S01_RS03115 PF08240 Alcohol dehydrogenase GroES-like domain Vc3S01_RS03115 PF00107 Zinc-binding dehydrogenase Vc3S01_RS03120 PF09335 SNARE associated Golgi protein Vc3S01_RS03125 PF00675 Insulinase (Peptidase family M16) Vc3S01_RS03125 PF05193 Peptidase M16 inactive domain Vc3S01_RS03130 PF04262 Glutamate-cysteine ligase Vc3S01_RS03140 PF02664 S-Ribosylhomocysteinase (LuxS) Vc3S01_RS03145 PF00571 CBS domain Vc3S01_RS03145 PF03471 Transporter associated domain Vc3S01_RS03145 PF01595 Cyclin M transmembrane N-terminal domain Vc3S01_RS03150 PF01578 Cytochrome C assembly protein Vc3S01_RS03155 PF02978 Signal peptide binding domain Vc3S01_RS03155 PF00448 SRP54-type protein, GTPase domain Vc3S01_RS03155 PF02881 SRP54-type protein, helical bundle domain Vc3S01_RS03160 PF00886 Ribosomal protein S16 Vc3S01_RS03165 PF05239 PRC-barrel domain Vc3S01_RS03165 PF01782 RimM N-terminal domain Vc3S01_RS03170 PF01746 tRNA (Guanine-1)-methyltransferase Vc3S01_RS03175 PF01245 Ribosomal protein L19 Vc3S01_RS03185 PF03884 DNA gyrase inhibitor YacG Vc3S01_RS03190 PF07072 Cell division protein Vc3S01_RS03195 PF01121 Dephospho-CoA kinase Vc3S01_RS03200 PF06750 Bacterial Peptidase A24 N-terminal domain Vc3S01_RS03200 PF01478 Type IV leader peptidase family Vc3S01_RS03205 PF00482 Type II secretion system (T2SS), protein F Vc3S01_RS03210 PF00437 Type II/IV secretion system protein Vc3S01_RS03210 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Vc3S01_RS03215 PF00114 Pilin (bacterial filament) Vc3S01_RS03215 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS03225 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Vc3S01_RS03225 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Vc3S01_RS03230 PF01510 N-acetylmuramoyl-L-alanine amidase Vc3S01_RS03235 PF07729 FCD domain Vc3S01_RS03235 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS03240 PF00456 Transketolase, thiamine diphosphate binding domain Vc3S01_RS03240 PF17831 Pyruvate dehydrogenase E1 component middle domain Vc3S01_RS03245 PF02817 e3 binding domain Vc3S01_RS03245 PF00364 Biotin-requiring enzyme Vc3S01_RS03245 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vc3S01_RS03250 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS03250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vc3S01_RS03260 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS03265 PF00156 Phosphoribosyl transferase domain Vc3S01_RS03270 PF00484 Carbonic anhydrase Vc3S01_RS03275 PF00916 Sulfate permease family Vc3S01_RS03275 PF01740 STAS domain Vc3S01_RS03280 PF00005 ABC transporter Vc3S01_RS03285 PF01061 ABC-2 type transporter Vc3S01_RS03290 PF03279 Bacterial lipid A biosynthesis acyltransferase Vc3S01_RS03295 PF02569 Pantoate-beta-alanine ligase Vc3S01_RS03300 PF02548 Ketopantoate hydroxymethyltransferase Vc3S01_RS03305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Vc3S01_RS03310 PF12627 Probable RNA and SrmB- binding site of polymerase A Vc3S01_RS03310 PF12626 Polymerase A arginine-rich C-terminus Vc3S01_RS03310 PF01743 Poly A polymerase head domain Vc3S01_RS03315 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vc3S01_RS03320 PF01258 Prokaryotic dksA/traR C4-type zinc finger Vc3S01_RS03325 PF17746 SfsA N-terminal OB domain Vc3S01_RS03325 PF03749 Sugar fermentation stimulation protein RE domain Vc3S01_RS03330 PF00271 Helicase conserved C-terminal domain Vc3S01_RS03330 PF04408 Helicase associated domain (HA2) Vc3S01_RS03330 PF00270 DEAD/DEAH box helicase Vc3S01_RS03330 PF08482 ATP-dependent helicase C-terminal Vc3S01_RS03335 PF00912 Transglycosylase Vc3S01_RS03335 PF14814 Bifunctional transglycosylase second domain Vc3S01_RS03335 PF00905 Penicillin binding protein transpeptidase domain Vc3S01_RS03340 PF01734 Patatin-like phospholipase Vc3S01_RS03345 PF06434 Aconitate hydratase 2 N-terminus Vc3S01_RS03345 PF11791 Aconitate B N-terminal domain Vc3S01_RS03345 PF00330 Aconitase family (aconitate hydratase) Vc3S01_RS03350 PF06062 Uncharacterised protein family (UPF0231) Vc3S01_RS03355 PF00543 Nitrogen regulatory protein P-II Vc3S01_RS03360 PF00909 Ammonium Transporter Family Vc3S01_RS03365 PF13416 Bacterial extracellular solute-binding protein Vc3S01_RS03375 PF00005 ABC transporter Vc3S01_RS03375 PF08402 TOBE domain Vc3S01_RS03380 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vc3S01_RS03380 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vc3S01_RS03380 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vc3S01_RS03380 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vc3S01_RS03385 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Vc3S01_RS03385 PF06165 Glycosyltransferase family 36 Vc3S01_RS03390 PF02838 Glycosyl hydrolase family 20, domain 2 Vc3S01_RS03390 PF00728 Glycosyl hydrolase family 20, catalytic domain Vc3S01_RS03395 PF01869 BadF/BadG/BcrA/BcrD ATPase family Vc3S01_RS03405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS03405 PF00005 ABC transporter Vc3S01_RS03410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS03410 PF00005 ABC transporter Vc3S01_RS03415 PF12911 N-terminal TM domain of oligopeptide transport permease C Vc3S01_RS03415 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS03420 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS03425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS03430 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS03430 PF00072 Response regulator receiver domain Vc3S01_RS03430 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS03430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS03440 PF05175 Methyltransferase small domain Vc3S01_RS03440 PF08468 Methyltransferase small domain N-terminal Vc3S01_RS03445 PF01594 AI-2E family transporter Vc3S01_RS03455 PF00202 Aminotransferase class-III Vc3S01_RS03460 PF01521 Iron-sulphur cluster biosynthesis Vc3S01_RS03465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS03470 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS03475 PF01476 LysM domain Vc3S01_RS03475 PF01551 Peptidase family M23 Vc3S01_RS03475 PF08525 Opacity-associated protein A N-terminal motif Vc3S01_RS03480 PF00579 tRNA synthetases class I (W and Y) Vc3S01_RS03490 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family Vc3S01_RS03495 PF13609 Gram-negative porin Vc3S01_RS03500 PF03449 Transcription elongation factor, N-terminal Vc3S01_RS03500 PF01272 Transcription elongation factor, GreA/GreB, C-term Vc3S01_RS03505 PF01985 CRS1 / YhbY (CRM) domain Vc3S01_RS03510 PF01728 FtsJ-like methyltransferase Vc3S01_RS03515 PF01434 Peptidase family M41 Vc3S01_RS03515 PF06480 FtsH Extracellular Vc3S01_RS03515 PF17862 AAA+ lid domain Vc3S01_RS03515 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS03520 PF00809 Pterin binding enzyme Vc3S01_RS03525 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vc3S01_RS03525 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vc3S01_RS03525 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vc3S01_RS03525 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vc3S01_RS03535 PF03840 Preprotein translocase SecG subunit Vc3S01_RS03550 PF17384 RimP C-terminal SH3 domain Vc3S01_RS03550 PF02576 RimP N-terminal domain Vc3S01_RS03555 PF00575 S1 RNA binding domain Vc3S01_RS03555 PF08529 NusA N-terminal domain Vc3S01_RS03555 PF13184 NusA-like KH domain Vc3S01_RS03560 PF08364 Bacterial translation initiation factor IF-2 associated region Vc3S01_RS03560 PF11987 Translation-initiation factor 2 Vc3S01_RS03560 PF04760 Translation initiation factor IF-2, N-terminal region Vc3S01_RS03560 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS03565 PF02033 Ribosome-binding factor A Vc3S01_RS03570 PF16198 tRNA pseudouridylate synthase B C-terminal domain Vc3S01_RS03570 PF01509 TruB family pseudouridylate synthase (N terminal domain) Vc3S01_RS03570 PF09157 Pseudouridine synthase II TruB, C-terminal Vc3S01_RS03575 PF00312 Ribosomal protein S15 Vc3S01_RS03580 PF00575 S1 RNA binding domain Vc3S01_RS03580 PF01138 3' exoribonuclease family, domain 1 Vc3S01_RS03580 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Vc3S01_RS03580 PF00013 KH domain Vc3S01_RS03580 PF03725 3' exoribonuclease family, domain 2 Vc3S01_RS03585 PF13181 Tetratricopeptide repeat Vc3S01_RS03585 PF07719 Tetratricopeptide repeat Vc3S01_RS03595 PF01554 MatE Vc3S01_RS03600 PF01136 Peptidase family U32 Vc3S01_RS03605 PF01136 Peptidase family U32 Vc3S01_RS03610 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS03610 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS03610 PF00563 EAL domain Vc3S01_RS03615 PF02036 SCP-2 sterol transfer family Vc3S01_RS03620 PF13508 Acetyltransferase (GNAT) domain Vc3S01_RS03640 PF05230 MASE2 domain Vc3S01_RS03640 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS03645 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS03645 PF03144 Elongation factor Tu domain 2 Vc3S01_RS03645 PF16658 Class II release factor RF3, C-terminal domain Vc3S01_RS03650 PF01026 TatD related DNase Vc3S01_RS03655 PF07670 Nucleoside recognition Vc3S01_RS03655 PF07662 Na+ dependent nucleoside transporter C-terminus Vc3S01_RS03655 PF01773 Na+ dependent nucleoside transporter N-terminus Vc3S01_RS03660 PF01791 DeoC/LacD family aldolase Vc3S01_RS03665 PF02885 Glycosyl transferase family, helical bundle domain Vc3S01_RS03665 PF00591 Glycosyl transferase family, a/b domain Vc3S01_RS03665 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Vc3S01_RS03670 PF01676 Metalloenzyme superfamily Vc3S01_RS03675 PF01048 Phosphorylase superfamily Vc3S01_RS03685 PF18429 Domain of unknown function (DUF5609) Vc3S01_RS03695 PF18073 Rubredoxin metal binding domain Vc3S01_RS03700 PF14492 Elongation Factor G, domain II Vc3S01_RS03700 PF00679 Elongation factor G C-terminus Vc3S01_RS03700 PF03764 Elongation factor G, domain IV Vc3S01_RS03700 PF03144 Elongation factor Tu domain 2 Vc3S01_RS03700 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS03705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS03705 PF03466 LysR substrate binding domain Vc3S01_RS03740 PF00501 AMP-binding enzyme Vc3S01_RS03745 PF12833 Helix-turn-helix domain Vc3S01_RS03745 PF02311 AraC-like ligand binding domain Vc3S01_RS03770 PF13629 Pilus formation protein N terminal region Vc3S01_RS03770 PF04972 BON domain Vc3S01_RS03770 PF00263 Bacterial type II and III secretion system protein Vc3S01_RS03800 PF00437 Type II/IV secretion system protein Vc3S01_RS03830 PF03466 LysR substrate binding domain Vc3S01_RS03830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS03835 PF01204 Trehalase Vc3S01_RS03845 PF13520 Amino acid permease Vc3S01_RS03850 PF04074 YhcH/YjgK/YiaL Vc3S01_RS03855 PF00703 Glycosyl hydrolases family 2 Vc3S01_RS03855 PF16353 Domain of unknown function(DUF4981) Vc3S01_RS03855 PF02929 Beta galactosidase small chain Vc3S01_RS03855 PF02837 Glycosyl hydrolases family 2, sugar binding domain Vc3S01_RS03855 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Vc3S01_RS03860 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS03865 PF00905 Penicillin binding protein transpeptidase domain Vc3S01_RS03865 PF03717 Penicillin-binding Protein dimerisation domain Vc3S01_RS03870 PF16363 GDP-mannose 4,6 dehydratase Vc3S01_RS03875 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Vc3S01_RS03875 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Vc3S01_RS03880 PF10509 Galactokinase galactose-binding signature Vc3S01_RS03880 PF08544 GHMP kinases C terminal Vc3S01_RS03880 PF00288 GHMP kinases N terminal domain Vc3S01_RS03885 PF01263 Aldose 1-epimerase Vc3S01_RS03895 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS03900 PF00367 phosphotransferase system, EIIB Vc3S01_RS03900 PF02378 Phosphotransferase system, EIIC Vc3S01_RS03910 PF01588 Putative tRNA binding domain Vc3S01_RS03935 PF01266 FAD dependent oxidoreductase Vc3S01_RS03935 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Vc3S01_RS03940 PF00455 DeoR C terminal sensor domain Vc3S01_RS03940 PF08220 DeoR-like helix-turn-helix domain Vc3S01_RS03945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Vc3S01_RS03945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Vc3S01_RS03950 PF00230 Major intrinsic protein Vc3S01_RS03960 PF07690 Major Facilitator Superfamily Vc3S01_RS03965 PF03009 Glycerophosphoryl diester phosphodiesterase family Vc3S01_RS03980 PF14602 Hexapeptide repeat of succinyl-transferase Vc3S01_RS03980 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle Vc3S01_RS03995 PF07130 YebG protein Vc3S01_RS04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS04000 PF03466 LysR substrate binding domain Vc3S01_RS04010 PF11893 Domain of unknown function (DUF3413) Vc3S01_RS04010 PF00884 Sulfatase Vc3S01_RS04015 PF17946 RecC C-terminal domain Vc3S01_RS04020 PF00580 UvrD/REP helicase N-terminal domain Vc3S01_RS04020 PF13361 UvrD-like helicase C-terminal domain Vc3S01_RS04020 PF12705 PD-(D/E)XK nuclease superfamily Vc3S01_RS04025 PF13538 UvrD-like helicase C-terminal domain Vc3S01_RS04045 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS04045 PF00696 Amino acid kinase family Vc3S01_RS04060 PF06725 3D domain Vc3S01_RS04060 PF03562 MltA specific insert domain Vc3S01_RS04065 PF00899 ThiF family Vc3S01_RS04070 PF02657 Fe-S metabolism associated domain Vc3S01_RS04075 PF00266 Aminotransferase class-V Vc3S01_RS04080 PF01965 DJ-1/PfpI family Vc3S01_RS04085 PF02558 Ketopantoate reductase PanE/ApbA Vc3S01_RS04085 PF08546 Ketopantoate reductase PanE/ApbA C terminal Vc3S01_RS04090 PF03502 Nucleoside-specific channel-forming protein, Tsx Vc3S01_RS04110 PF04542 Sigma-70 region 2 Vc3S01_RS04110 PF04545 Sigma-70, region 4 Vc3S01_RS04120 PF07690 Major Facilitator Superfamily Vc3S01_RS04125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vc3S01_RS04135 PF05175 Methyltransferase small domain Vc3S01_RS04140 PF01722 BolA-like protein Vc3S01_RS04145 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Vc3S01_RS04145 PF11973 NQRA C-terminal domain Vc3S01_RS04150 PF03116 NQR2, RnfD, RnfE family Vc3S01_RS04155 PF04205 FMN-binding domain Vc3S01_RS04160 PF02508 Rnf-Nqr subunit, membrane protein Vc3S01_RS04165 PF02508 Rnf-Nqr subunit, membrane protein Vc3S01_RS04170 PF00970 Oxidoreductase FAD-binding domain Vc3S01_RS04170 PF00111 2Fe-2S iron-sulfur cluster binding domain Vc3S01_RS04170 PF00175 Oxidoreductase NAD-binding domain Vc3S01_RS04175 PF02424 ApbE family Vc3S01_RS04185 PF00072 Response regulator receiver domain Vc3S01_RS04185 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS04190 PF00817 impB/mucB/samB family Vc3S01_RS04190 PF11799 impB/mucB/samB family C-terminal domain Vc3S01_RS04190 PF11798 IMS family HHH motif Vc3S01_RS04195 PF00271 Helicase conserved C-terminal domain Vc3S01_RS04195 PF00270 DEAD/DEAH box helicase Vc3S01_RS04195 PF00570 HRDC domain Vc3S01_RS04195 PF09382 RQC domain Vc3S01_RS04195 PF16124 RecQ zinc-binding Vc3S01_RS04200 PF03449 Transcription elongation factor, N-terminal Vc3S01_RS04200 PF01272 Transcription elongation factor, GreA/GreB, C-term Vc3S01_RS04210 PF00041 Fibronectin type III domain Vc3S01_RS04210 PF00704 Glycosyl hydrolases family 18 Vc3S01_RS04215 PF00209 Sodium:neurotransmitter symporter family Vc3S01_RS04225 PF06786 Uncharacterised protein family (UPF0253) Vc3S01_RS04235 PF04073 Aminoacyl-tRNA editing domain Vc3S01_RS04235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vc3S01_RS04235 PF03129 Anticodon binding domain Vc3S01_RS04240 PF01980 tRNA-methyltransferase O Vc3S01_RS04240 PF18389 TrmO C-terminal domain Vc3S01_RS04245 PF01197 Ribosomal protein L31 Vc3S01_RS04250 PF00444 Ribosomal protein L36 Vc3S01_RS04255 PF03806 AbgT putative transporter family Vc3S01_RS04260 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Vc3S01_RS04290 PF04287 tRNA pseudouridine synthase C Vc3S01_RS04295 PF00849 RNA pseudouridylate synthase Vc3S01_RS04300 PF11944 Protein of unknown function (DUF3461) Vc3S01_RS04305 PF01842 ACT domain Vc3S01_RS04305 PF08335 GlnD PII-uridylyltransferase Vc3S01_RS04305 PF01966 HD domain Vc3S01_RS04305 PF01909 Nucleotidyltransferase domain Vc3S01_RS04310 PF00557 Metallopeptidase family M24 Vc3S01_RS04315 PF00318 Ribosomal protein S2 Vc3S01_RS04320 PF00889 Elongation factor TS Vc3S01_RS04325 PF00696 Amino acid kinase family Vc3S01_RS04330 PF01765 Ribosome recycling factor Vc3S01_RS04335 PF01255 Putative undecaprenyl diphosphate synthase Vc3S01_RS04345 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Vc3S01_RS04345 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Vc3S01_RS04345 PF13288 DXP reductoisomerase C-terminal domain Vc3S01_RS04350 PF02163 Peptidase family M50 Vc3S01_RS04350 PF17820 PDZ domain Vc3S01_RS04355 PF01103 Surface antigen Vc3S01_RS04355 PF07244 Surface antigen variable number repeat Vc3S01_RS04360 PF03938 Outer membrane protein (OmpH-like) Vc3S01_RS04365 PF00132 Bacterial transferase hexapeptide (six repeats) Vc3S01_RS04365 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Vc3S01_RS04370 PF07977 FabA-like domain Vc3S01_RS04375 PF00132 Bacterial transferase hexapeptide (six repeats) Vc3S01_RS04375 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Vc3S01_RS04380 PF02684 Lipid-A-disaccharide synthetase Vc3S01_RS04385 PF01351 Ribonuclease HII Vc3S01_RS04390 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vc3S01_RS04390 PF01336 OB-fold nucleic acid binding domain Vc3S01_RS04390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vc3S01_RS04390 PF02811 PHP domain Vc3S01_RS04390 PF14579 Helix-hairpin-helix motif Vc3S01_RS04395 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Vc3S01_RS04400 PF01171 PP-loop family Vc3S01_RS04400 PF09179 TilS substrate binding domain Vc3S01_RS04400 PF11734 TilS substrate C-terminal domain Vc3S01_RS04405 PF00034 Cytochrome c Vc3S01_RS04410 PF00543 Nitrogen regulatory protein P-II Vc3S01_RS04425 PF01464 Transglycosylase SLT domain Vc3S01_RS04425 PF01476 LysM domain Vc3S01_RS04430 PF16123 Hydroxyacylglutathione hydrolase C-terminus Vc3S01_RS04435 PF08241 Methyltransferase domain Vc3S01_RS04440 PF00075 RNase H Vc3S01_RS04445 PF00929 Exonuclease Vc3S01_RS04470 PF09317 Domain of unknown function (DUF1974) Vc3S01_RS04470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vc3S01_RS04470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vc3S01_RS04470 PF02770 Acyl-CoA dehydrogenase, middle domain Vc3S01_RS04475 PF13580 SIS domain Vc3S01_RS04480 PF13230 Glutamine amidotransferases class-II Vc3S01_RS04485 PF00551 Formyl transferase Vc3S01_RS04490 PF00586 AIR synthase related protein, N-terminal domain Vc3S01_RS04490 PF02769 AIR synthase related protein, C-terminal domain Vc3S01_RS04500 PF00860 Permease family Vc3S01_RS04520 PF13181 Tetratricopeptide repeat Vc3S01_RS04520 PF01435 Peptidase family M48 Vc3S01_RS04530 PF01594 AI-2E family transporter Vc3S01_RS04535 PF00578 AhpC/TSA family Vc3S01_RS04540 PF01842 ACT domain Vc3S01_RS04545 PF00701 Dihydrodipicolinate synthetase family Vc3S01_RS04550 PF06804 NlpB/DapX lipoprotein Vc3S01_RS04565 PF01546 Peptidase family M20/M25/M40 Vc3S01_RS04565 PF07687 Peptidase dimerisation domain Vc3S01_RS04570 PF03960 ArsC family Vc3S01_RS04595 PF11143 Protein of unknown function (DUF2919) Vc3S01_RS04600 PF04261 Dyp-type peroxidase family Vc3S01_RS04605 PF12833 Helix-turn-helix domain Vc3S01_RS04610 PF11975 Family 4 glycosyl hydrolase C-terminal domain Vc3S01_RS04610 PF02056 Family 4 glycosyl hydrolase Vc3S01_RS04625 PF00669 Bacterial flagellin N-terminal helical region Vc3S01_RS04625 PF07196 Flagellin hook IN motif Vc3S01_RS04625 PF00700 Bacterial flagellin C-terminal helical region Vc3S01_RS04635 PF07196 Flagellin hook IN motif Vc3S01_RS04635 PF00700 Bacterial flagellin C-terminal helical region Vc3S01_RS04635 PF00669 Bacterial flagellin N-terminal helical region Vc3S01_RS04640 PF00700 Bacterial flagellin C-terminal helical region Vc3S01_RS04640 PF07196 Flagellin hook IN motif Vc3S01_RS04640 PF00669 Bacterial flagellin N-terminal helical region Vc3S01_RS04645 PF03646 FlaG protein Vc3S01_RS04650 PF07195 Flagellar hook-associated protein 2 C-terminus Vc3S01_RS04650 PF07196 Flagellin hook IN motif Vc3S01_RS04650 PF02465 Flagellar hook-associated protein 2 N-terminus Vc3S01_RS04660 PF02561 Flagellar protein FliS Vc3S01_RS04665 PF00158 Sigma-54 interaction domain Vc3S01_RS04665 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS04665 PF06490 Flagellar regulatory protein FleQ Vc3S01_RS04670 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS04670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS04670 PF13188 PAS domain Vc3S01_RS04675 PF00158 Sigma-54 interaction domain Vc3S01_RS04675 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS04675 PF00072 Response regulator receiver domain Vc3S01_RS04680 PF02049 Flagellar hook-basal body complex protein FliE Vc3S01_RS04685 PF08345 Flagellar M-ring protein C-terminal Vc3S01_RS04685 PF01514 Secretory protein of YscJ/FliF family Vc3S01_RS04690 PF14842 FliG N-terminal domain Vc3S01_RS04690 PF14841 FliG middle domain Vc3S01_RS04690 PF01706 FliG C-terminal domain Vc3S01_RS04700 PF18269 T3SS EscN ATPase C-terminal domain Vc3S01_RS04700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vc3S01_RS04725 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vc3S01_RS04725 PF02154 Flagellar motor switch protein FliM Vc3S01_RS04730 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vc3S01_RS04735 PF04347 Flagellar biosynthesis protein, FliO Vc3S01_RS04740 PF00813 FliP family Vc3S01_RS04745 PF01313 Bacterial export proteins, family 3 Vc3S01_RS04750 PF01311 Bacterial export proteins, family 1 Vc3S01_RS04755 PF01312 FlhB HrpN YscU SpaS Family Vc3S01_RS04760 PF00771 FHIPEP family Vc3S01_RS04765 PF00448 SRP54-type protein, GTPase domain Vc3S01_RS04770 PF10609 NUBPL iron-transfer P-loop NTPase Vc3S01_RS04775 PF04542 Sigma-70 region 2 Vc3S01_RS04775 PF04539 Sigma-70 region 3 Vc3S01_RS04775 PF04545 Sigma-70, region 4 Vc3S01_RS04780 PF00072 Response regulator receiver domain Vc3S01_RS04785 PF04344 Chemotaxis phosphatase, CheZ Vc3S01_RS04790 PF02895 Signal transducing histidine kinase, homodimeric domain Vc3S01_RS04790 PF01627 Hpt domain Vc3S01_RS04790 PF01584 CheW-like domain Vc3S01_RS04790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS04790 PF00072 Response regulator receiver domain Vc3S01_RS04795 PF01339 CheB methylesterase Vc3S01_RS04795 PF00072 Response regulator receiver domain Vc3S01_RS04800 PF13614 AAA domain Vc3S01_RS04810 PF01584 CheW-like domain Vc3S01_RS04820 PF00005 ABC transporter Vc3S01_RS04825 PF03379 CcmB protein Vc3S01_RS04830 PF01578 Cytochrome C assembly protein Vc3S01_RS04840 PF03100 CcmE Vc3S01_RS04845 PF01578 Cytochrome C assembly protein Vc3S01_RS04845 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Vc3S01_RS04850 PF08534 Redoxin Vc3S01_RS04855 PF03918 Cytochrome C biogenesis protein Vc3S01_RS04860 PF03918 Cytochrome C biogenesis protein Vc3S01_RS04865 PF04333 MlaA lipoprotein Vc3S01_RS04870 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_RS04875 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_RS04885 PF08281 Sigma-70, region 4 Vc3S01_RS04885 PF04542 Sigma-70 region 2 Vc3S01_RS04895 PF00108 Thiolase, N-terminal domain Vc3S01_RS04895 PF02803 Thiolase, C-terminal domain Vc3S01_RS04900 PF00378 Enoyl-CoA hydratase/isomerase Vc3S01_RS04900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Vc3S01_RS04900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Vc3S01_RS04910 PF00675 Insulinase (Peptidase family M16) Vc3S01_RS04910 PF05193 Peptidase M16 inactive domain Vc3S01_RS04910 PF16187 Middle or third domain of peptidase_M16 Vc3S01_RS04915 PF00300 Histidine phosphatase superfamily (branch 1) Vc3S01_RS04920 PF01713 Smr domain Vc3S01_RS04925 PF05175 Methyltransferase small domain Vc3S01_RS04930 PF01264 Chorismate synthase Vc3S01_RS04935 PF03458 UPF0126 domain Vc3S01_RS04940 PF04315 Elongation factor P hydroxylase Vc3S01_RS04945 PF08891 YfcL protein Vc3S01_RS04960 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Vc3S01_RS04960 PF01266 FAD dependent oxidoreductase Vc3S01_RS04965 PF02801 Beta-ketoacyl synthase, C-terminal domain Vc3S01_RS04965 PF00109 Beta-ketoacyl synthase, N-terminal domain Vc3S01_RS04975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vc3S01_RS04975 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vc3S01_RS04975 PF11890 Domain of unknown function (DUF3410) Vc3S01_RS04980 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vc3S01_RS04980 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vc3S01_RS04990 PF01416 tRNA pseudouridine synthase Vc3S01_RS05000 PF01039 Carboxyl transferase domain Vc3S01_RS05000 PF17848 Acetyl-coA carboxylase zinc finger domain Vc3S01_RS05005 PF02875 Mur ligase family, glutamate ligase domain Vc3S01_RS05005 PF08245 Mur ligase middle domain Vc3S01_RS05010 PF05036 Sporulation related domain Vc3S01_RS05015 PF02674 Colicin V production protein Vc3S01_RS05020 PF00156 Phosphoribosyl transferase domain Vc3S01_RS05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS05025 PF03466 LysR substrate binding domain Vc3S01_RS05030 PF00072 Response regulator receiver domain Vc3S01_RS05040 PF04304 Protein of unknown function (DUF454) Vc3S01_RS05045 PF00156 Phosphoribosyl transferase domain Vc3S01_RS05050 PF12169 DNA polymerase III subunits gamma and tau domain III Vc3S01_RS05050 PF12170 DNA polymerase III tau subunit V interacting with alpha Vc3S01_RS05055 PF02575 YbaB/EbfC DNA-binding family Vc3S01_RS05060 PF02132 RecR protein Vc3S01_RS05060 PF13662 Toprim domain Vc3S01_RS05065 PF00230 Major intrinsic protein Vc3S01_RS05075 PF01042 Endoribonuclease L-PSP Vc3S01_RS05080 PF03313 Serine dehydratase alpha chain Vc3S01_RS05085 PF13309 HTH domain Vc3S01_RS05085 PF08348 YheO-like PAS domain Vc3S01_RS05090 PF03692 Putative zinc- or iron-chelating domain Vc3S01_RS05095 PF03692 Putative zinc- or iron-chelating domain Vc3S01_RS05100 PF04226 Transglycosylase associated protein Vc3S01_RS05105 PF06826 Predicted Permease Membrane Region Vc3S01_RS05110 PF00282 Pyridoxal-dependent decarboxylase conserved domain Vc3S01_RS05115 PF05552 Conserved TM helix Vc3S01_RS05115 PF00924 Mechanosensitive ion channel Vc3S01_RS05125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS05135 PF00245 Alkaline phosphatase Vc3S01_RS05140 PF02028 BCCT, betaine/carnitine/choline family transporter Vc3S01_RS05155 PF13847 Methyltransferase domain Vc3S01_RS05160 PF01156 Inosine-uridine preferring nucleoside hydrolase Vc3S01_RS05170 PF01263 Aldose 1-epimerase Vc3S01_RS05175 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vc3S01_RS05175 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vc3S01_RS05180 PF01641 SelR domain Vc3S01_RS05190 PF07023 Protein of unknown function (DUF1315) Vc3S01_RS05195 PF17763 Glutaminase/Asparaginase C-terminal domain Vc3S01_RS05195 PF00710 Asparaginase, N-terminal Vc3S01_RS05200 PF01343 Peptidase family S49 Vc3S01_RS05205 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS05205 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vc3S01_RS05210 PF00881 Nitroreductase family Vc3S01_RS05215 PF01751 Toprim domain Vc3S01_RS05215 PF01131 DNA topoisomerase Vc3S01_RS05225 PF00106 short chain dehydrogenase Vc3S01_RS05230 PF00850 Histone deacetylase domain Vc3S01_RS05240 PF05987 Bacterial protein of unknown function (DUF898) Vc3S01_RS05255 PF00884 Sulfatase Vc3S01_RS05255 PF11893 Domain of unknown function (DUF3413) Vc3S01_RS05260 PF07208 Protein of unknown function (DUF1414) Vc3S01_RS05265 PF04245 37-kD nucleoid-associated bacterial protein Vc3S01_RS05280 PF03553 Na+/H+ antiporter family Vc3S01_RS05285 PF01118 Semialdehyde dehydrogenase, NAD binding domain Vc3S01_RS05285 PF02774 Semialdehyde dehydrogenase, dimerisation domain Vc3S01_RS05290 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS05295 PF00520 Ion transport protein Vc3S01_RS05295 PF00027 Cyclic nucleotide-binding domain Vc3S01_RS05300 PF01914 MarC family integral membrane protein Vc3S01_RS05305 PF00171 Aldehyde dehydrogenase family Vc3S01_RS05305 PF00465 Iron-containing alcohol dehydrogenase Vc3S01_RS05320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Vc3S01_RS05320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Vc3S01_RS05325 PF00462 Glutaredoxin Vc3S01_RS05330 PF00589 Phage integrase family Vc3S01_RS05330 PF02899 Phage integrase, N-terminal SAM-like domain Vc3S01_RS05350 PF01844 HNH endonuclease Vc3S01_RS05390 PF01389 OmpA-like transmembrane domain Vc3S01_RS05390 PF00691 OmpA family Vc3S01_RS05400 PF00691 OmpA family Vc3S01_RS05400 PF01389 OmpA-like transmembrane domain Vc3S01_RS05470 PF18821 Large polyvalent protein-associated domain 7 Vc3S01_RS05470 PF03432 Relaxase/Mobilisation nuclease domain Vc3S01_RS05495 PF02534 Type IV secretory system Conjugative DNA transfer Vc3S01_RS05500 PF00437 Type II/IV secretion system protein Vc3S01_RS05505 PF03743 Bacterial conjugation TrbI-like protein Vc3S01_RS05510 PF03524 Conjugal transfer protein Vc3S01_RS05515 PF04335 VirB8 protein Vc3S01_RS05535 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Vc3S01_RS05570 PF13726 Na+-H+ antiporter family Vc3S01_RS05570 PF03553 Na+/H+ antiporter family Vc3S01_RS05575 PF00929 Exonuclease Vc3S01_RS05580 PF00691 OmpA family Vc3S01_RS05580 PF18393 MotY N-terminal domain Vc3S01_RS05585 PF10952 Protein of unknown function (DUF2753) Vc3S01_RS05590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS05595 PF00730 HhH-GPD superfamily base excision DNA repair protein Vc3S01_RS05595 PF10576 Iron-sulfur binding domain of endonuclease III Vc3S01_RS05595 PF00633 Helix-hairpin-helix motif Vc3S01_RS05600 PF02508 Rnf-Nqr subunit, membrane protein Vc3S01_RS05605 PF04205 FMN-binding domain Vc3S01_RS05610 PF03116 NQR2, RnfD, RnfE family Vc3S01_RS05615 PF13375 RnfC Barrel sandwich hybrid domain Vc3S01_RS05615 PF12838 4Fe-4S dicluster domain Vc3S01_RS05615 PF10531 SLBB domain Vc3S01_RS05615 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Vc3S01_RS05620 PF04060 Putative Fe-S cluster Vc3S01_RS05625 PF02508 Rnf-Nqr subunit, membrane protein Vc3S01_RS05630 PF02901 Pyruvate formate lyase-like Vc3S01_RS05630 PF01228 Glycine radical Vc3S01_RS05635 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS05635 PF00072 Response regulator receiver domain Vc3S01_RS05645 PF03372 Endonuclease/Exonuclease/phosphatase family Vc3S01_RS05675 PF04851 Type III restriction enzyme, res subunit Vc3S01_RS05675 PF17757 UvrB interaction domain Vc3S01_RS05675 PF12344 Ultra-violet resistance protein B Vc3S01_RS05675 PF00271 Helicase conserved C-terminal domain Vc3S01_RS05675 PF02151 UvrB/uvrC motif Vc3S01_RS05680 PF00158 Sigma-54 interaction domain Vc3S01_RS05680 PF00072 Response regulator receiver domain Vc3S01_RS05680 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS05685 PF01627 Hpt domain Vc3S01_RS05690 PF01933 Uncharacterised protein family UPF0052 Vc3S01_RS05695 PF06463 Molybdenum Cofactor Synthesis C Vc3S01_RS05695 PF04055 Radical SAM superfamily Vc3S01_RS05700 PF00994 Probable molybdopterin binding domain Vc3S01_RS05705 PF01967 MoaC family Vc3S01_RS05710 PF02597 ThiS family Vc3S01_RS05715 PF02391 MoaE protein Vc3S01_RS05720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS05725 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS05730 PF12911 N-terminal TM domain of oligopeptide transport permease C Vc3S01_RS05730 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS05735 PF00005 ABC transporter Vc3S01_RS05735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS05740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS05740 PF00005 ABC transporter Vc3S01_RS05745 PF13409 Glutathione S-transferase, N-terminal domain Vc3S01_RS05750 PF13194 Domain of unknown function (DUF4010) Vc3S01_RS05755 PF01515 Phosphate acetyl/butaryl transferase Vc3S01_RS05755 PF07085 DRTGG domain Vc3S01_RS05760 PF00871 Acetokinase family Vc3S01_RS05765 PF04217 Protein of unknown function, DUF412 Vc3S01_RS05780 PF02653 Branched-chain amino acid transport system / permease component Vc3S01_RS05785 PF00005 ABC transporter Vc3S01_RS05790 PF02903 Alpha amylase, N-terminal ig-like domain Vc3S01_RS05790 PF00128 Alpha amylase, catalytic domain Vc3S01_RS05795 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS05795 PF00072 Response regulator receiver domain Vc3S01_RS05800 PF01207 Dihydrouridine synthase (Dus) Vc3S01_RS05805 PF07516 SecA Wing and Scaffold domain Vc3S01_RS05805 PF01043 SecA preprotein cross-linking domain Vc3S01_RS05805 PF07517 SecA DEAD-like domain Vc3S01_RS05805 PF02810 SEC-C motif Vc3S01_RS05810 PF02600 Disulfide bond formation protein DsbB Vc3S01_RS05815 PF06450 Bacterial Na+/H+ antiporter B (NhaB) Vc3S01_RS05820 PF07840 FadR C-terminal domain Vc3S01_RS05820 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS05830 PF09334 tRNA synthetases class I (M) Vc3S01_RS05830 PF01588 Putative tRNA binding domain Vc3S01_RS05835 PF10609 NUBPL iron-transfer P-loop NTPase Vc3S01_RS05840 PF00485 Phosphoribulokinase / Uridine kinase family Vc3S01_RS05850 PF12557 Cob(I)alamin adenosyltransferase N terminal Vc3S01_RS05850 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP Vc3S01_RS05855 PF01451 Low molecular weight phosphotyrosine protein phosphatase Vc3S01_RS05860 PF01740 STAS domain Vc3S01_RS05860 PF00916 Sulfate permease family Vc3S01_RS05870 PF00575 S1 RNA binding domain Vc3S01_RS05870 PF12111 Polyribonucleotide phosphorylase C terminal Vc3S01_RS05870 PF10150 Ribonuclease E/G family Vc3S01_RS05875 PF00849 RNA pseudouridylate synthase Vc3S01_RS05875 PF01479 S4 domain Vc3S01_RS05880 PF02545 Maf-like protein Vc3S01_RS05885 PF02620 Large ribosomal RNA subunit accumulation protein YceD Vc3S01_RS05890 PF01783 Ribosomal L32p protein family Vc3S01_RS05895 PF02504 Fatty acid synthesis protein Vc3S01_RS05900 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Vc3S01_RS05900 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Vc3S01_RS05905 PF00698 Acyl transferase domain Vc3S01_RS05915 PF00550 Phosphopantetheine attachment site Vc3S01_RS05920 PF00109 Beta-ketoacyl synthase, N-terminal domain Vc3S01_RS05920 PF02801 Beta-ketoacyl synthase, C-terminal domain Vc3S01_RS05925 PF01063 Amino-transferase class IV Vc3S01_RS05930 PF02618 YceG-like family Vc3S01_RS05935 PF02223 Thymidylate kinase Vc3S01_RS05940 PF09115 DNA polymerase III, delta subunit, C terminal Vc3S01_RS05945 PF01026 TatD related DNase Vc3S01_RS05950 PF00367 phosphotransferase system, EIIB Vc3S01_RS05950 PF02378 Phosphotransferase system, EIIC Vc3S01_RS05965 PF00209 Sodium:neurotransmitter symporter family Vc3S01_RS05980 PF01734 Patatin-like phospholipase Vc3S01_RS05985 PF07979 Intimin C-type lectin domain Vc3S01_RS05985 PF09134 Invasin, domain 3 Vc3S01_RS05985 PF11924 Inverse autotransporter, beta-domain Vc3S01_RS05985 PF02369 Bacterial Ig-like domain (group 1) Vc3S01_RS06005 PF00135 Carboxylesterase family Vc3S01_RS06015 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS06015 PF18500 CadC C-terminal domain 1 Vc3S01_RS06025 PF02887 Pyruvate kinase, alpha/beta domain Vc3S01_RS06025 PF00224 Pyruvate kinase, barrel domain Vc3S01_RS06030 PF00480 ROK family Vc3S01_RS06035 PF00072 Response regulator receiver domain Vc3S01_RS06035 PF01584 CheW-like domain Vc3S01_RS06040 PF01336 OB-fold nucleic acid binding domain Vc3S01_RS06040 PF02811 PHP domain Vc3S01_RS06040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vc3S01_RS06040 PF14579 Helix-hairpin-helix motif Vc3S01_RS06040 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vc3S01_RS06055 PF00106 short chain dehydrogenase Vc3S01_RS06060 PF08496 Peptidase family S49 N-terminal Vc3S01_RS06060 PF01343 Peptidase family S49 Vc3S01_RS06065 PF02224 Cytidylate kinase Vc3S01_RS06070 PF00575 S1 RNA binding domain Vc3S01_RS06075 PF00216 Bacterial DNA-binding protein Vc3S01_RS06080 PF06305 Lipopolysaccharide assembly protein A domain Vc3S01_RS06085 PF18073 Rubredoxin metal binding domain Vc3S01_RS06090 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Vc3S01_RS06095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS06115 PF03886 ABC-type transport auxiliary lipoprotein component Vc3S01_RS06120 PF02470 MlaD protein Vc3S01_RS06125 PF04403 Paraquat-inducible protein A Vc3S01_RS06130 PF03466 LysR substrate binding domain Vc3S01_RS06130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS06140 PF11412 Disulphide bond corrector protein DsbC Vc3S01_RS06140 PF02683 Cytochrome C biogenesis protein transmembrane region Vc3S01_RS06145 PF00085 Thioredoxin Vc3S01_RS06155 PF05958 tRNA (Uracil-5-)-methyltransferase Vc3S01_RS06185 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS06195 PF02687 FtsX-like permease family Vc3S01_RS06195 PF12704 MacB-like periplasmic core domain Vc3S01_RS06200 PF02687 FtsX-like permease family Vc3S01_RS06200 PF00005 ABC transporter Vc3S01_RS06200 PF12704 MacB-like periplasmic core domain Vc3S01_RS06205 PF00005 ABC transporter Vc3S01_RS06205 PF12704 MacB-like periplasmic core domain Vc3S01_RS06205 PF02687 FtsX-like permease family Vc3S01_RS06210 PF03543 Yersinia/Haemophilus virulence surface antigen Vc3S01_RS06220 PF14579 Helix-hairpin-helix motif Vc3S01_RS06220 PF02811 PHP domain Vc3S01_RS06220 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Vc3S01_RS06220 PF11490 DNA polymerase III polC-type N-terminus II Vc3S01_RS06220 PF00929 Exonuclease Vc3S01_RS06220 PF07733 Bacterial DNA polymerase III alpha NTPase domain Vc3S01_RS06235 PF08267 Cobalamin-independent synthase, N-terminal domain Vc3S01_RS06235 PF01717 Cobalamin-independent synthase, Catalytic domain Vc3S01_RS06250 PF00529 HlyD membrane-fusion protein of T1SS Vc3S01_RS06250 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS06255 PF03466 LysR substrate binding domain Vc3S01_RS06255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS06280 PF00069 Protein kinase domain Vc3S01_RS06285 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS06285 PF00672 HAMP domain Vc3S01_RS06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS06290 PF00072 Response regulator receiver domain Vc3S01_RS06290 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS06295 PF00535 Glycosyl transferase family 2 Vc3S01_RS06300 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase Vc3S01_RS06310 PF00672 HAMP domain Vc3S01_RS06310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS06315 PF02668 Taurine catabolism dioxygenase TauD, TfdA family Vc3S01_RS06320 PF08348 YheO-like PAS domain Vc3S01_RS06320 PF13309 HTH domain Vc3S01_RS06325 PF01042 Endoribonuclease L-PSP Vc3S01_RS06330 PF00375 Sodium:dicarboxylate symporter family Vc3S01_RS06335 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vc3S01_RS06335 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS06355 PF11842 Domain of unknown function (DUF3362) Vc3S01_RS06355 PF04055 Radical SAM superfamily Vc3S01_RS06355 PF08497 Radical SAM N-terminal Vc3S01_RS06360 PF00563 EAL domain Vc3S01_RS06360 PF00498 FHA domain Vc3S01_RS06360 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS06375 PF03466 LysR substrate binding domain Vc3S01_RS06375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS06380 PF08267 Cobalamin-independent synthase, N-terminal domain Vc3S01_RS06380 PF01717 Cobalamin-independent synthase, Catalytic domain Vc3S01_RS06390 PF03795 YCII-related domain Vc3S01_RS06395 PF03061 Thioesterase superfamily Vc3S01_RS06400 PF04279 Intracellular septation protein A Vc3S01_RS06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS06410 PF00072 Response regulator receiver domain Vc3S01_RS06415 PF17327 Acyl homoserine lactone synthase Vc3S01_RS06420 PF00375 Sodium:dicarboxylate symporter family Vc3S01_RS06425 PF00290 Tryptophan synthase alpha chain Vc3S01_RS06430 PF00291 Pyridoxal-phosphate dependent enzyme Vc3S01_RS06435 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Vc3S01_RS06435 PF00218 Indole-3-glycerol phosphate synthase Vc3S01_RS06440 PF02885 Glycosyl transferase family, helical bundle domain Vc3S01_RS06440 PF00591 Glycosyl transferase family, a/b domain Vc3S01_RS06445 PF00117 Glutamine amidotransferase class-I Vc3S01_RS06450 PF04715 Anthranilate synthase component I, N terminal region Vc3S01_RS06450 PF00425 chorismate binding enzyme Vc3S01_RS06455 PF08056 Tryptophan operon leader peptide Vc3S01_RS06460 PF02811 PHP domain Vc3S01_RS06465 PF01300 Telomere recombination Vc3S01_RS06475 PF01479 S4 domain Vc3S01_RS06475 PF00849 RNA pseudouridylate synthase Vc3S01_RS06480 PF04269 Protein of unknown function, DUF440 Vc3S01_RS06485 PF01132 Elongation factor P (EF-P) OB domain Vc3S01_RS06485 PF08207 Elongation factor P (EF-P) KOW-like domain Vc3S01_RS06485 PF09285 Elongation factor P, C-terminal Vc3S01_RS06495 PF03104 DNA polymerase family B, exonuclease domain Vc3S01_RS06495 PF00136 DNA polymerase family B Vc3S01_RS06500 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS06500 PF00072 Response regulator receiver domain Vc3S01_RS06505 PF01541 GIY-YIG catalytic domain Vc3S01_RS06505 PF02151 UvrB/uvrC motif Vc3S01_RS06505 PF08459 UvrC Helix-hairpin-helix N-terminal Vc3S01_RS06510 PF01066 CDP-alcohol phosphatidyltransferase Vc3S01_RS06535 PF00202 Aminotransferase class-III Vc3S01_RS06540 PF03435 Saccharopine dehydrogenase NADP binding domain Vc3S01_RS06540 PF16653 Saccharopine dehydrogenase C-terminal domain Vc3S01_RS06545 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Vc3S01_RS06560 PF02464 Competence-damaged protein Vc3S01_RS06560 PF00994 Probable molybdopterin binding domain Vc3S01_RS06570 PF00268 Ribonucleotide reductase, small chain Vc3S01_RS06575 PF02867 Ribonucleotide reductase, barrel domain Vc3S01_RS06575 PF00317 Ribonucleotide reductase, all-alpha domain Vc3S01_RS06575 PF03477 ATP cone domain Vc3S01_RS06585 PF00521 DNA gyrase/topoisomerase IV, subunit A Vc3S01_RS06585 PF03989 DNA gyrase C-terminal domain, beta-propeller Vc3S01_RS06600 PF02335 Cytochrome c552 Vc3S01_RS06610 PF13247 4Fe-4S dicluster domain Vc3S01_RS06615 PF03916 Polysulphide reductase, NrfD Vc3S01_RS06620 PF01578 Cytochrome C assembly protein Vc3S01_RS06620 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Vc3S01_RS06625 PF08534 Redoxin Vc3S01_RS06630 PF03918 Cytochrome C biogenesis protein Vc3S01_RS06640 PF00925 GTP cyclohydrolase II Vc3S01_RS06665 PF01471 Putative peptidoglycan binding domain Vc3S01_RS06665 PF03734 L,D-transpeptidase catalytic domain Vc3S01_RS06670 PF05951 Bacterial protein of unknown function (DUF882) Vc3S01_RS06675 PF00753 Metallo-beta-lactamase superfamily Vc3S01_RS06690 PF03480 Bacterial extracellular solute-binding protein, family 7 Vc3S01_RS06700 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vc3S01_RS06705 PF07730 Histidine kinase Vc3S01_RS06705 PF17200 Single Cache domain 2 Vc3S01_RS06710 PF00072 Response regulator receiver domain Vc3S01_RS06710 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS06715 PF01047 MarR family Vc3S01_RS06720 PF02028 BCCT, betaine/carnitine/choline family transporter Vc3S01_RS06725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS06725 PF00672 HAMP domain Vc3S01_RS06745 PF00155 Aminotransferase class I and II Vc3S01_RS06750 PF00672 HAMP domain Vc3S01_RS06750 PF01966 HD domain Vc3S01_RS06765 PF00155 Aminotransferase class I and II Vc3S01_RS06765 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS06780 PF00152 tRNA synthetases class II (D, K and N) Vc3S01_RS06780 PF01336 OB-fold nucleic acid binding domain Vc3S01_RS06785 PF02743 Cache domain Vc3S01_RS06785 PF00672 HAMP domain Vc3S01_RS06785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS06790 PF01242 6-pyruvoyl tetrahydropterin synthase Vc3S01_RS06795 PF00072 Response regulator receiver domain Vc3S01_RS06795 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS06805 PF00563 EAL domain Vc3S01_RS06805 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS06805 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS06810 PF03315 Serine dehydratase beta chain Vc3S01_RS06810 PF03313 Serine dehydratase alpha chain Vc3S01_RS06815 PF03222 Tryptophan/tyrosine permease family Vc3S01_RS06820 PF00293 NUDIX domain Vc3S01_RS06830 PF09308 LuxQ, periplasmic Vc3S01_RS06830 PF00072 Response regulator receiver domain Vc3S01_RS06830 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS06830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS06835 PF04715 Anthranilate synthase component I, N terminal region Vc3S01_RS06835 PF00425 chorismate binding enzyme Vc3S01_RS06850 PF04317 YcjX-like family, DUF463 Vc3S01_RS06855 PF05128 Domain of unknown function (DUF697) Vc3S01_RS06860 PF18024 Helix-turn-helix domain Vc3S01_RS06860 PF00158 Sigma-54 interaction domain Vc3S01_RS06865 PF13302 Acetyltransferase (GNAT) domain Vc3S01_RS06880 PF13495 Phage integrase, N-terminal SAM-like domain Vc3S01_RS06880 PF00589 Phage integrase family Vc3S01_RS07005 PF00958 GMP synthase C terminal domain Vc3S01_RS07005 PF13673 Acetyltransferase (GNAT) domain Vc3S01_RS07005 PF00117 Glutamine amidotransferase class-I Vc3S01_RS07005 PF03352 Methyladenine glycosylase Vc3S01_RS07005 PF13302 Acetyltransferase (GNAT) domain Vc3S01_RS07040 PF00293 NUDIX domain Vc3S01_RS07270 PF08241 Methyltransferase domain Vc3S01_RS07300 PF01555 DNA methylase Vc3S01_RS07670 PF00293 NUDIX domain Vc3S01_RS07675 PF06271 RDD family Vc3S01_RS07700 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vc3S01_RS07890 PF00106 short chain dehydrogenase Vc3S01_RS07905 PF03575 Peptidase family S51 Vc3S01_RS07935 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS07940 PF00939 Sodium:sulfate symporter transmembrane region Vc3S01_RS07945 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS07945 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS07950 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS07950 PF00158 Sigma-54 interaction domain Vc3S01_RS07950 PF00072 Response regulator receiver domain Vc3S01_RS07955 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS07955 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS07955 PF00563 EAL domain Vc3S01_RS07960 PF01966 HD domain Vc3S01_RS07960 PF11871 Domain of unknown function (DUF3391) Vc3S01_RS07965 PF01810 LysE type translocator Vc3S01_RS07970 PF11230 Protein of unknown function (DUF3029) Vc3S01_RS07975 PF04055 Radical SAM superfamily Vc3S01_RS07980 PF03466 LysR substrate binding domain Vc3S01_RS07980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS07985 PF03741 Integral membrane protein TerC family Vc3S01_RS07995 PF01966 HD domain Vc3S01_RS08000 PF00106 short chain dehydrogenase Vc3S01_RS08005 PF00465 Iron-containing alcohol dehydrogenase Vc3S01_RS08010 PF03222 Tryptophan/tyrosine permease family Vc3S01_RS08030 PF00005 ABC transporter Vc3S01_RS08030 PF00664 ABC transporter transmembrane region Vc3S01_RS08035 PF00005 ABC transporter Vc3S01_RS08035 PF00664 ABC transporter transmembrane region Vc3S01_RS08040 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS08045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS08045 PF03466 LysR substrate binding domain Vc3S01_RS08055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vc3S01_RS08055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Vc3S01_RS08070 PF00012 Hsp70 protein Vc3S01_RS08075 PF00012 Hsp70 protein Vc3S01_RS08085 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS08115 PF07504 Fungalysin/Thermolysin Propeptide Motif Vc3S01_RS08115 PF04151 Bacterial pre-peptidase C-terminal domain Vc3S01_RS08115 PF02868 Thermolysin metallopeptidase, alpha-helical domain Vc3S01_RS08115 PF01447 Thermolysin metallopeptidase, catalytic domain Vc3S01_RS08115 PF03413 Peptidase propeptide and YPEB domain Vc3S01_RS08135 PF17912 MalK OB fold domain Vc3S01_RS08135 PF03459 TOBE domain Vc3S01_RS08135 PF00005 ABC transporter Vc3S01_RS08140 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Vc3S01_RS08145 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS08150 PF13416 Bacterial extracellular solute-binding protein Vc3S01_RS08155 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS08160 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS08170 PF01915 Glycosyl hydrolase family 3 C-terminal domain Vc3S01_RS08170 PF00933 Glycosyl hydrolase family 3 N terminal domain Vc3S01_RS08170 PF14310 Fibronectin type III-like domain Vc3S01_RS08175 PF00384 Molybdopterin oxidoreductase Vc3S01_RS08175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS08175 PF01568 Molydopterin dinucleotide binding domain Vc3S01_RS08180 PF13247 4Fe-4S dicluster domain Vc3S01_RS08180 PF12800 4Fe-4S binding domain Vc3S01_RS08185 PF04976 DMSO reductase anchor subunit (DmsC) Vc3S01_RS08190 PF02613 Nitrate reductase delta subunit Vc3S01_RS08200 PF02525 Flavodoxin-like fold Vc3S01_RS08205 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Vc3S01_RS08205 PF04408 Helicase associated domain (HA2) Vc3S01_RS08205 PF11898 Domain of unknown function (DUF3418) Vc3S01_RS08205 PF00271 Helicase conserved C-terminal domain Vc3S01_RS08205 PF00270 DEAD/DEAH box helicase Vc3S01_RS08235 PF04204 Homoserine O-succinyltransferase Vc3S01_RS08255 PF00893 Small Multidrug Resistance protein Vc3S01_RS08260 PF13520 Amino acid permease Vc3S01_RS08265 PF01810 LysE type translocator Vc3S01_RS08270 PF03279 Bacterial lipid A biosynthesis acyltransferase Vc3S01_RS08275 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS08290 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Vc3S01_RS08295 PF01810 LysE type translocator Vc3S01_RS08305 PF03440 Aerolysin/Pertussis toxin (APT) domain Vc3S01_RS08305 PF01117 Aerolysin toxin Vc3S01_RS08310 PF13737 Transposase DDE domain Vc3S01_RS08315 PF03440 Aerolysin/Pertussis toxin (APT) domain Vc3S01_RS08315 PF01117 Aerolysin toxin Vc3S01_RS08325 PF03440 Aerolysin/Pertussis toxin (APT) domain Vc3S01_RS08325 PF01117 Aerolysin toxin Vc3S01_RS08340 PF01235 Sodium:alanine symporter family Vc3S01_RS08365 PF00884 Sulfatase Vc3S01_RS08380 PF01406 tRNA synthetases class I (C) catalytic domain Vc3S01_RS08385 PF01554 MatE Vc3S01_RS08390 PF00571 CBS domain Vc3S01_RS08400 PF02028 BCCT, betaine/carnitine/choline family transporter Vc3S01_RS08405 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS08410 PF00202 Aminotransferase class-III Vc3S01_RS08415 PF06339 Ectoine synthase Vc3S01_RS08420 PF13840 ACT domain Vc3S01_RS08420 PF00696 Amino acid kinase family Vc3S01_RS08430 PF00034 Cytochrome c Vc3S01_RS08430 PF03150 Di-haem cytochrome c peroxidase Vc3S01_RS08435 PF00082 Subtilase family Vc3S01_RS08435 PF05922 Peptidase inhibitor I9 Vc3S01_RS08435 PF04151 Bacterial pre-peptidase C-terminal domain Vc3S01_RS08440 PF01447 Thermolysin metallopeptidase, catalytic domain Vc3S01_RS08440 PF04151 Bacterial pre-peptidase C-terminal domain Vc3S01_RS08440 PF07504 Fungalysin/Thermolysin Propeptide Motif Vc3S01_RS08440 PF03413 Peptidase propeptide and YPEB domain Vc3S01_RS08440 PF02868 Thermolysin metallopeptidase, alpha-helical domain Vc3S01_RS08455 PF01220 Dehydroquinase class II Vc3S01_RS08460 PF08501 Shikimate dehydrogenase substrate binding domain Vc3S01_RS08460 PF01488 Shikimate / quinate 5-dehydrogenase Vc3S01_RS08465 PF03737 Aldolase/RraA Vc3S01_RS08470 PF04303 PrpF protein Vc3S01_RS08475 PF04909 Amidohydrolase Vc3S01_RS08480 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit Vc3S01_RS08485 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Vc3S01_RS08490 PF02585 GlcNAc-PI de-N-acetylase Vc3S01_RS08495 PF00248 Aldo/keto reductase family Vc3S01_RS08500 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vc3S01_RS08510 PF03466 LysR substrate binding domain Vc3S01_RS08510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS08515 PF03480 Bacterial extracellular solute-binding protein, family 7 Vc3S01_RS08520 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vc3S01_RS08525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vc3S01_RS08530 PF03547 Membrane transport protein Vc3S01_RS08540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS08540 PF01261 Xylose isomerase-like TIM barrel Vc3S01_RS08570 PF00174 Oxidoreductase molybdopterin binding domain Vc3S01_RS08575 PF01794 Ferric reductase like transmembrane component Vc3S01_RS08605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS08625 PF17203 Single cache domain 3 Vc3S01_RS08625 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain Vc3S01_RS08625 PF00989 PAS fold Vc3S01_RS08625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS08630 PF12431 Transcriptional regulator Vc3S01_RS08630 PF00072 Response regulator receiver domain Vc3S01_RS08635 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Vc3S01_RS08635 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Vc3S01_RS08640 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Vc3S01_RS08645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vc3S01_RS08645 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Vc3S01_RS08675 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS08675 PF01590 GAF domain Vc3S01_RS08675 PF00158 Sigma-54 interaction domain Vc3S01_RS08680 PF00171 Aldehyde dehydrogenase family Vc3S01_RS08685 PF16868 NMT1-like family Vc3S01_RS08690 PF01925 Sulfite exporter TauE/SafE Vc3S01_RS08695 PF01970 Tripartite tricarboxylate transporter TctA family Vc3S01_RS08730 PF03793 PASTA domain Vc3S01_RS08730 PF00069 Protein kinase domain Vc3S01_RS08745 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE Vc3S01_RS08765 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS08765 PF07724 AAA domain (Cdc48 subfamily) Vc3S01_RS08765 PF10431 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS08765 PF17871 AAA lid domain Vc3S01_RS08785 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_RS08790 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_RS08820 PF06715 Gp5 C-terminal repeat (3 copies) Vc3S01_RS08820 PF04717 Type VI secretion system, phage-baseplate injector Vc3S01_RS08840 PF00285 Citrate synthase, C-terminal domain Vc3S01_RS08845 PF00330 Aconitase family (aconitate hydratase) Vc3S01_RS08845 PF00694 Aconitase C-terminal domain Vc3S01_RS08850 PF04303 PrpF protein Vc3S01_RS08855 PF16177 Acetyl-coenzyme A synthetase N-terminus Vc3S01_RS08855 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS08855 PF00501 AMP-binding enzyme Vc3S01_RS08860 PF03466 LysR substrate binding domain Vc3S01_RS08860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS08865 PF00884 Sulfatase Vc3S01_RS08870 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS08875 PF00089 Trypsin Vc3S01_RS08890 PF04055 Radical SAM superfamily Vc3S01_RS08895 PF06508 Queuosine biosynthesis protein QueC Vc3S01_RS08900 PF17158 Membrane-associated sensor, integral membrane domain Vc3S01_RS08900 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS08910 PF00691 OmpA family Vc3S01_RS08910 PF05736 OprF membrane domain Vc3S01_RS08985 PF05736 OprF membrane domain Vc3S01_RS08985 PF00691 OmpA family Vc3S01_RS09000 PF10672 S-adenosylmethionine-dependent methyltransferase Vc3S01_RS09000 PF17785 PUA-like domain Vc3S01_RS09010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS09010 PF00672 HAMP domain Vc3S01_RS09010 PF02743 Cache domain Vc3S01_RS09015 PF00708 Acylphosphatase Vc3S01_RS09020 PF04358 DsrC like protein Vc3S01_RS09030 PF01027 Inhibitor of apoptosis-promoting Bax1 Vc3S01_RS09035 PF00005 ABC transporter Vc3S01_RS09040 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS09045 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS09050 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS09055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vc3S01_RS09055 PF14824 Sirohaem biosynthesis protein central Vc3S01_RS09055 PF10414 Sirohaem synthase dimerisation region Vc3S01_RS09060 PF04461 Protein of unknown function (DUF520) Vc3S01_RS09065 PF00793 DAHP synthetase I family Vc3S01_RS09085 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF Vc3S01_RS09085 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF Vc3S01_RS09085 PF01189 16S rRNA methyltransferase RsmB/F Vc3S01_RS09090 PF02470 MlaD protein Vc3S01_RS09095 PF04403 Paraquat-inducible protein A Vc3S01_RS09100 PF00005 ABC transporter Vc3S01_RS09100 PF00664 ABC transporter transmembrane region Vc3S01_RS09105 PF13185 GAF domain Vc3S01_RS09110 PF17516 ProQ C-terminal domain Vc3S01_RS09110 PF04352 ProQ/FINO family Vc3S01_RS09115 PF11818 C-terminal domain of tail specific protease (DUF3340) Vc3S01_RS09115 PF00595 PDZ domain Vc3S01_RS09115 PF17804 Tail specific protease N-terminal domain Vc3S01_RS09115 PF03572 Peptidase family S41 Vc3S01_RS09125 PF01433 Peptidase family M1 domain Vc3S01_RS09125 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Vc3S01_RS09125 PF11940 Domain of unknown function (DUF3458) Ig-like fold Vc3S01_RS09135 PF05088 Bacterial NAD-glutamate dehydrogenase Vc3S01_RS09140 PF01180 Dihydroorotate dehydrogenase Vc3S01_RS09145 PF07126 Cell-division protein ZapC Vc3S01_RS09150 PF01170 Putative RNA methylase family UPF0020 Vc3S01_RS09150 PF02926 THUMP domain Vc3S01_RS09150 PF10672 S-adenosylmethionine-dependent methyltransferase Vc3S01_RS09160 PF00005 ABC transporter Vc3S01_RS09160 PF16326 ABC transporter C-terminal domain Vc3S01_RS09160 PF12848 ABC transporter Vc3S01_RS09170 PF04957 Ribosome modulation factor Vc3S01_RS09180 PF07977 FabA-like domain Vc3S01_RS09185 PF05362 Lon protease (S16) C-terminal proteolytic domain Vc3S01_RS09185 PF13654 AAA domain Vc3S01_RS09190 PF17414 MatP C-terminal ribbon-helix-helix domain Vc3S01_RS09190 PF06303 MatP N-terminal domain Vc3S01_RS09220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS09220 PF00072 Response regulator receiver domain Vc3S01_RS09220 PF09308 LuxQ, periplasmic Vc3S01_RS09220 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS09235 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vc3S01_RS09250 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP Vc3S01_RS09250 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vc3S01_RS09260 PF00403 Heavy-metal-associated domain Vc3S01_RS09275 PF00027 Cyclic nucleotide-binding domain Vc3S01_RS09275 PF13545 Crp-like helix-turn-helix domain Vc3S01_RS09280 PF00582 Universal stress protein family Vc3S01_RS09285 PF01171 PP-loop family Vc3S01_RS09305 PF00005 ABC transporter Vc3S01_RS09305 PF08402 TOBE domain Vc3S01_RS09310 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS09315 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS09320 PF13416 Bacterial extracellular solute-binding protein Vc3S01_RS09325 PF13416 Bacterial extracellular solute-binding protein Vc3S01_RS09330 PF02146 Sir2 family Vc3S01_RS09350 PF13247 4Fe-4S dicluster domain Vc3S01_RS09355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS09355 PF01568 Molydopterin dinucleotide binding domain Vc3S01_RS09355 PF00384 Molybdopterin oxidoreductase Vc3S01_RS09365 PF02613 Nitrate reductase delta subunit Vc3S01_RS09385 PF02634 FdhD/NarQ family Vc3S01_RS09390 PF00884 Sulfatase Vc3S01_RS09400 PF12848 ABC transporter Vc3S01_RS09400 PF00005 ABC transporter Vc3S01_RS09415 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS09415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS09420 PF00158 Sigma-54 interaction domain Vc3S01_RS09420 PF00072 Response regulator receiver domain Vc3S01_RS09420 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS09425 PF12849 PBP superfamily domain Vc3S01_RS09430 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS09435 PF00005 ABC transporter Vc3S01_RS09435 PF08402 TOBE domain Vc3S01_RS09440 PF12804 MobA-like NTP transferase domain Vc3S01_RS09445 PF03454 MoeA C-terminal region (domain IV) Vc3S01_RS09445 PF03453 MoeA N-terminal region (domain I and II) Vc3S01_RS09445 PF00994 Probable molybdopterin binding domain Vc3S01_RS09455 PF00480 ROK family Vc3S01_RS09460 PF03942 DTW domain Vc3S01_RS09510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS09510 PF17202 Single cache domain 3 Vc3S01_RS09510 PF00672 HAMP domain Vc3S01_RS09515 PF00877 NlpC/P60 family Vc3S01_RS09525 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS09525 PF05230 MASE2 domain Vc3S01_RS09530 PF01339 CheB methylesterase Vc3S01_RS09530 PF00072 Response regulator receiver domain Vc3S01_RS09535 PF03881 Fructosamine kinase Vc3S01_RS09545 PF00677 Lumazine binding domain Vc3S01_RS09550 PF01554 MatE Vc3S01_RS09560 PF01068 ATP dependent DNA ligase domain Vc3S01_RS09560 PF14743 DNA ligase OB-like domain Vc3S01_RS09565 PF01740 STAS domain Vc3S01_RS09570 PF00691 OmpA family Vc3S01_RS09575 PF02563 Polysaccharide biosynthesis/export protein Vc3S01_RS09575 PF10531 SLBB domain Vc3S01_RS09590 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS09590 PF00072 Response regulator receiver domain Vc3S01_RS09590 PF00158 Sigma-54 interaction domain Vc3S01_RS09595 PF00534 Glycosyl transferases group 1 Vc3S01_RS09595 PF13439 Glycosyltransferase Family 4 Vc3S01_RS09600 PF13439 Glycosyltransferase Family 4 Vc3S01_RS09600 PF00534 Glycosyl transferases group 1 Vc3S01_RS09630 PF00534 Glycosyl transferases group 1 Vc3S01_RS09630 PF13439 Glycosyltransferase Family 4 Vc3S01_RS09640 PF02397 Bacterial sugar transferase Vc3S01_RS09650 PF13402 Peptidase M60, enhancin and enhancin-like Vc3S01_RS09650 PF17291 N-terminal domain of M60-like peptidases Vc3S01_RS09650 PF13322 Domain of unknown function (DUF4092) Vc3S01_RS09675 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS09675 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS09675 PF00563 EAL domain Vc3S01_RS09675 PF13188 PAS domain Vc3S01_RS09680 PF00672 HAMP domain Vc3S01_RS09680 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vc3S01_RS09680 PF00072 Response regulator receiver domain Vc3S01_RS09680 PF01627 Hpt domain Vc3S01_RS09680 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS09700 PF00132 Bacterial transferase hexapeptide (six repeats) Vc3S01_RS09700 PF12464 Maltose acetyltransferase Vc3S01_RS09710 PF01928 CYTH domain Vc3S01_RS09725 PF01047 MarR family Vc3S01_RS09735 PF01238 Phosphomannose isomerase type I Vc3S01_RS09750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vc3S01_RS09750 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS09760 PF01968 Hydantoinase/oxoprolinase Vc3S01_RS09760 PF05378 Hydantoinase/oxoprolinase N-terminal region Vc3S01_RS09770 PF01074 Glycosyl hydrolases family 38 N-terminal domain Vc3S01_RS09770 PF07748 Glycosyl hydrolases family 38 C-terminal domain Vc3S01_RS09770 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 Vc3S01_RS09770 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Vc3S01_RS09770 PF09261 Alpha mannosidase middle domain Vc3S01_RS09775 PF00480 ROK family Vc3S01_RS09780 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase Vc3S01_RS09790 PF00480 ROK family Vc3S01_RS09805 PF03729 Short repeat of unknown function (DUF308) Vc3S01_RS09810 PF00924 Mechanosensitive ion channel Vc3S01_RS09820 PF04151 Bacterial pre-peptidase C-terminal domain Vc3S01_RS09820 PF05922 Peptidase inhibitor I9 Vc3S01_RS09820 PF00082 Subtilase family Vc3S01_RS09825 PF17945 Beta/Gamma crystallin Vc3S01_RS09825 PF12561 ToxR activated gene A lipoprotein domain Vc3S01_RS09830 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family Vc3S01_RS09845 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS09845 PF00072 Response regulator receiver domain Vc3S01_RS09895 PF01966 HD domain Vc3S01_RS09930 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS09935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS09945 PF03616 Sodium/glutamate symporter Vc3S01_RS09970 PF02798 Glutathione S-transferase, N-terminal domain Vc3S01_RS09970 PF14497 Glutathione S-transferase, C-terminal domain Vc3S01_RS09980 PF04209 homogentisate 1,2-dioxygenase Vc3S01_RS09985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS09995 PF07687 Peptidase dimerisation domain Vc3S01_RS09995 PF01546 Peptidase family M20/M25/M40 Vc3S01_RS10005 PF12561 ToxR activated gene A lipoprotein domain Vc3S01_RS10005 PF00041 Fibronectin type III domain Vc3S01_RS10025 PF01048 Phosphorylase superfamily Vc3S01_RS10040 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS10040 PF00072 Response regulator receiver domain Vc3S01_RS10045 PF05971 RNA methyltransferase Vc3S01_RS10050 PF01863 Protein of unknown function DUF45 Vc3S01_RS10060 PF02368 Bacterial Ig-like domain (group 2) Vc3S01_RS10060 PF11999 Protein of unknown function (DUF3494) Vc3S01_RS10070 PF00732 GMC oxidoreductase Vc3S01_RS10070 PF05199 GMC oxidoreductase Vc3S01_RS10075 PF00072 Response regulator receiver domain Vc3S01_RS10075 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS10085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS10085 PF00072 Response regulator receiver domain Vc3S01_RS10085 PF09308 LuxQ, periplasmic Vc3S01_RS10085 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS10145 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS10170 PF03466 LysR substrate binding domain Vc3S01_RS10170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS10175 PF07690 Major Facilitator Superfamily Vc3S01_RS10195 PF00005 ABC transporter Vc3S01_RS10200 PF01032 FecCD transport family Vc3S01_RS10205 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Vc3S01_RS10215 PF00300 Histidine phosphatase superfamily (branch 1) Vc3S01_RS10220 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Vc3S01_RS10225 PF02654 Cobalamin-5-phosphate synthase Vc3S01_RS10230 PF02277 Phosphoribosyltransferase Vc3S01_RS10235 PF01613 Flavin reductase like domain Vc3S01_RS10240 PF13460 NAD(P)H-binding Vc3S01_RS10245 PF00375 Sodium:dicarboxylate symporter family Vc3S01_RS10255 PF00929 Exonuclease Vc3S01_RS10255 PF08411 Exonuclease C-terminal Vc3S01_RS10260 PF03788 LrgA family Vc3S01_RS10265 PF04172 LrgB-like family Vc3S01_RS10270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vc3S01_RS10270 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region Vc3S01_RS10280 PF02222 ATP-grasp domain Vc3S01_RS10285 PF05724 Thiopurine S-methyltransferase (TPMT) Vc3S01_RS10295 PF00216 Bacterial DNA-binding protein Vc3S01_RS10310 PF00550 Phosphopantetheine attachment site Vc3S01_RS10310 PF00668 Condensation domain Vc3S01_RS10310 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS10310 PF00501 AMP-binding enzyme Vc3S01_RS10315 PF01032 FecCD transport family Vc3S01_RS10320 PF01032 FecCD transport family Vc3S01_RS10325 PF01497 Periplasmic binding protein Vc3S01_RS10330 PF00593 TonB dependent receptor Vc3S01_RS10330 PF07715 TonB-dependent Receptor Plug Domain Vc3S01_RS10335 PF00501 AMP-binding enzyme Vc3S01_RS10335 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS10335 PF00668 Condensation domain Vc3S01_RS10340 PF00975 Thioesterase domain Vc3S01_RS10345 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Vc3S01_RS10350 PF00668 Condensation domain Vc3S01_RS10350 PF00550 Phosphopantetheine attachment site Vc3S01_RS10350 PF00501 AMP-binding enzyme Vc3S01_RS10355 PF00282 Pyridoxal-dependent decarboxylase conserved domain Vc3S01_RS10360 PF00664 ABC transporter transmembrane region Vc3S01_RS10360 PF00005 ABC transporter Vc3S01_RS10360 PF04954 Siderophore-interacting protein Vc3S01_RS10360 PF08021 Siderophore-interacting FAD-binding domain Vc3S01_RS10365 PF00005 ABC transporter Vc3S01_RS10370 PF00857 Isochorismatase family Vc3S01_RS10370 PF00550 Phosphopantetheine attachment site Vc3S01_RS10375 PF01588 Putative tRNA binding domain Vc3S01_RS10375 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Vc3S01_RS10375 PF03483 B3/4 domain Vc3S01_RS10375 PF03147 Ferredoxin-fold anticodon binding domain Vc3S01_RS10375 PF03484 tRNA synthetase B5 domain Vc3S01_RS10380 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Vc3S01_RS10380 PF01409 tRNA synthetases class II core domain (F) Vc3S01_RS10385 PF17158 Membrane-associated sensor, integral membrane domain Vc3S01_RS10385 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS10415 PF01906 Putative heavy-metal-binding Vc3S01_RS10420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS10425 PF01042 Endoribonuclease L-PSP Vc3S01_RS10440 PF00453 Ribosomal protein L20 Vc3S01_RS10445 PF01632 Ribosomal protein L35 Vc3S01_RS10450 PF05198 Translation initiation factor IF-3, N-terminal domain Vc3S01_RS10450 PF00707 Translation initiation factor IF-3, C-terminal domain Vc3S01_RS10455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Vc3S01_RS10455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vc3S01_RS10455 PF02824 TGS domain Vc3S01_RS10455 PF03129 Anticodon binding domain Vc3S01_RS10465 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS10465 PF07702 UTRA domain Vc3S01_RS10470 PF01979 Amidohydrolase family Vc3S01_RS10475 PF00491 Arginase family Vc3S01_RS10480 PF17391 Urocanase N-terminal domain Vc3S01_RS10480 PF01175 Urocanase Rossmann-like domain Vc3S01_RS10480 PF17392 Urocanase C-terminal domain Vc3S01_RS10485 PF00221 Aromatic amino acid lyase Vc3S01_RS10505 PF03496 ADP-ribosyltransferase exoenzyme Vc3S01_RS10510 PF03496 ADP-ribosyltransferase exoenzyme Vc3S01_RS10530 PF13183 4Fe-4S dicluster domain Vc3S01_RS10530 PF02913 FAD linked oxidases, C-terminal domain Vc3S01_RS10530 PF01565 FAD binding domain Vc3S01_RS10545 PF00691 OmpA family Vc3S01_RS10545 PF05736 OprF membrane domain Vc3S01_RS10570 PF01259 SAICAR synthetase Vc3S01_RS10575 PF09423 PhoD-like phosphatase Vc3S01_RS10575 PF16655 PhoD-like phosphatase, N-terminal domain Vc3S01_RS10585 PF02253 Phospholipase A1 Vc3S01_RS10590 PF00271 Helicase conserved C-terminal domain Vc3S01_RS10590 PF04408 Helicase associated domain (HA2) Vc3S01_RS10590 PF00270 DEAD/DEAH box helicase Vc3S01_RS10590 PF11898 Domain of unknown function (DUF3418) Vc3S01_RS10590 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold Vc3S01_RS10595 PF00390 Malic enzyme, N-terminal domain Vc3S01_RS10595 PF03949 Malic enzyme, NAD binding domain Vc3S01_RS10600 PF02698 DUF218 domain Vc3S01_RS10605 PF00939 Sodium:sulfate symporter transmembrane region Vc3S01_RS10610 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS10610 PF08448 PAS fold Vc3S01_RS10620 PF00266 Aminotransferase class-V Vc3S01_RS10630 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS10635 PF00005 ABC transporter Vc3S01_RS10635 PF00664 ABC transporter transmembrane region Vc3S01_RS10640 PF00005 ABC transporter Vc3S01_RS10640 PF00664 ABC transporter transmembrane region Vc3S01_RS10645 PF00291 Pyridoxal-phosphate dependent enzyme Vc3S01_RS10650 PF02447 GntP family permease Vc3S01_RS10655 PF03466 LysR substrate binding domain Vc3S01_RS10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS10660 PF00563 EAL domain Vc3S01_RS10660 PF12792 CSS motif domain associated with EAL Vc3S01_RS10690 PF00563 EAL domain Vc3S01_RS10690 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS10690 PF08448 PAS fold Vc3S01_RS10690 PF08447 PAS fold Vc3S01_RS10705 PF00266 Aminotransferase class-V Vc3S01_RS10715 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS10715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS10715 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS10730 PF04993 TfoX N-terminal domain Vc3S01_RS10730 PF04994 TfoX C-terminal domain Vc3S01_RS10745 PF03956 Lysine exporter LysO Vc3S01_RS10755 PF00282 Pyridoxal-dependent decarboxylase conserved domain Vc3S01_RS10760 PF01380 SIS domain Vc3S01_RS10760 PF01418 Helix-turn-helix domain, rpiR family Vc3S01_RS10765 PF00465 Iron-containing alcohol dehydrogenase Vc3S01_RS10770 PF00462 Glutaredoxin Vc3S01_RS10775 PF06826 Predicted Permease Membrane Region Vc3S01_RS10775 PF02080 TrkA-C domain Vc3S01_RS10780 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Vc3S01_RS10780 PF07055 Enoyl reductase FAD binding domain Vc3S01_RS10780 PF12241 Trans-2-enoyl-CoA reductase catalytic region Vc3S01_RS10785 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vc3S01_RS10785 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vc3S01_RS10785 PF02770 Acyl-CoA dehydrogenase, middle domain Vc3S01_RS10785 PF09317 Domain of unknown function (DUF1974) Vc3S01_RS10790 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS10790 PF16295 Tetracyclin repressor-like, C-terminal domain Vc3S01_RS10795 PF06965 Na+/H+ antiporter 1 Vc3S01_RS10810 PF00005 ABC transporter Vc3S01_RS10815 PF01554 MatE Vc3S01_RS10820 PF11066 Protein of unknown function (DUF2867) Vc3S01_RS10820 PF13460 NAD(P)H-binding Vc3S01_RS10825 PF01734 Patatin-like phospholipase Vc3S01_RS10835 PF07690 Major Facilitator Superfamily Vc3S01_RS10840 PF01479 S4 domain Vc3S01_RS10840 PF00849 RNA pseudouridylate synthase Vc3S01_RS10845 PF04851 Type III restriction enzyme, res subunit Vc3S01_RS10845 PF00271 Helicase conserved C-terminal domain Vc3S01_RS10865 PF17155 Gammaproteobacterial periplasmic sensor domain Vc3S01_RS10865 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS10875 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS10875 PF00072 Response regulator receiver domain Vc3S01_RS10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS10890 PF02709 N-terminal domain of galactosyltransferase Vc3S01_RS10890 PF00535 Glycosyl transferase family 2 Vc3S01_RS10895 PF01386 Ribosomal L25p family Vc3S01_RS10910 PF02872 5'-nucleotidase, C-terminal domain Vc3S01_RS10910 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS10920 PF06945 Protein of unknown function (DUF1289) Vc3S01_RS10930 PF01740 STAS domain Vc3S01_RS10930 PF00916 Sulfate permease family Vc3S01_RS10940 PF00072 Response regulator receiver domain Vc3S01_RS10940 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS10945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS10945 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS10955 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS10955 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vc3S01_RS10965 PF09335 SNARE associated Golgi protein Vc3S01_RS10970 PF13416 Bacterial extracellular solute-binding protein Vc3S01_RS10975 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS10980 PF00005 ABC transporter Vc3S01_RS10985 PF01066 CDP-alcohol phosphatidyltransferase Vc3S01_RS10995 PF07690 Major Facilitator Superfamily Vc3S01_RS11000 PF01590 GAF domain Vc3S01_RS11000 PF00158 Sigma-54 interaction domain Vc3S01_RS11005 PF03063 Prismane/CO dehydrogenase family Vc3S01_RS11010 PF00175 Oxidoreductase NAD-binding domain Vc3S01_RS11010 PF00970 Oxidoreductase FAD-binding domain Vc3S01_RS11010 PF00111 2Fe-2S iron-sulfur cluster binding domain Vc3S01_RS11020 PF00849 RNA pseudouridylate synthase Vc3S01_RS11025 PF00672 HAMP domain Vc3S01_RS11025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS11025 PF12729 Four helix bundle sensory module for signal transduction Vc3S01_RS11030 PF00209 Sodium:neurotransmitter symporter family Vc3S01_RS11035 PF13091 PLD-like domain Vc3S01_RS11035 PF13396 Phospholipase_D-nuclease N-terminal Vc3S01_RS11040 PF01053 Cys/Met metabolism PLP-dependent enzyme Vc3S01_RS11045 PF00561 alpha/beta hydrolase fold Vc3S01_RS11050 PF03280 Proteobacterial lipase chaperone protein Vc3S01_RS11065 PF03352 Methyladenine glycosylase Vc3S01_RS11070 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS11075 PF13533 Biotin-lipoyl like Vc3S01_RS11085 PF04024 PspC domain Vc3S01_RS11090 PF06667 Phage shock protein B Vc3S01_RS11095 PF04012 PspA/IM30 family Vc3S01_RS11100 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS11100 PF00158 Sigma-54 interaction domain Vc3S01_RS11105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS11110 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS11115 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS11115 PF12911 N-terminal TM domain of oligopeptide transport permease C Vc3S01_RS11120 PF00005 ABC transporter Vc3S01_RS11120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS11125 PF00005 ABC transporter Vc3S01_RS11135 PF02833 DHHA2 domain Vc3S01_RS11135 PF01368 DHH family Vc3S01_RS11145 PF16875 Glycosyl hydrolase family 36 N-terminal domain Vc3S01_RS11145 PF16874 Glycosyl hydrolase family 36 C-terminal domain Vc3S01_RS11150 PF01568 Molydopterin dinucleotide binding domain Vc3S01_RS11150 PF18364 Molybdopterin oxidoreductase N-terminal domain Vc3S01_RS11150 PF00384 Molybdopterin oxidoreductase Vc3S01_RS11155 PF03264 NapC/NirT cytochrome c family, N-terminal region Vc3S01_RS11160 PF06796 Periplasmic nitrate reductase protein NapE Vc3S01_RS11165 PF03649 Uncharacterised protein family (UPF0014) Vc3S01_RS11175 PF01226 Formate/nitrite transporter Vc3S01_RS11200 PF02698 DUF218 domain Vc3S01_RS11205 PF00265 Thymidine kinase Vc3S01_RS11210 PF01406 tRNA synthetases class I (C) catalytic domain Vc3S01_RS11210 PF09190 DALR domain Vc3S01_RS11215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vc3S01_RS11220 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS11225 PF00563 EAL domain Vc3S01_RS11225 PF08668 HDOD domain Vc3S01_RS11230 PF02810 SEC-C motif Vc3S01_RS11235 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Vc3S01_RS11235 PF01502 Phosphoribosyl-AMP cyclohydrolase Vc3S01_RS11240 PF00977 Histidine biosynthesis protein Vc3S01_RS11245 PF00977 Histidine biosynthesis protein Vc3S01_RS11250 PF00117 Glutamine amidotransferase class-I Vc3S01_RS11255 PF08645 Polynucleotide kinase 3 phosphatase Vc3S01_RS11255 PF00475 Imidazoleglycerol-phosphate dehydratase Vc3S01_RS11260 PF00155 Aminotransferase class I and II Vc3S01_RS11265 PF00815 Histidinol dehydrogenase Vc3S01_RS11270 PF08029 HisG, C-terminal domain Vc3S01_RS11270 PF01634 ATP phosphoribosyltransferase Vc3S01_RS11275 PF00158 Sigma-54 interaction domain Vc3S01_RS11275 PF00072 Response regulator receiver domain Vc3S01_RS11275 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS11280 PF03553 Na+/H+ antiporter family Vc3S01_RS11285 PF00816 H-NS histone family Vc3S01_RS11290 PF00294 pfkB family carbohydrate kinase Vc3S01_RS11305 PF04356 Protein of unknown function (DUF489) Vc3S01_RS11310 PF08328 Adenylosuccinate lyase C-terminal Vc3S01_RS11310 PF00206 Lyase Vc3S01_RS11345 PF00106 short chain dehydrogenase Vc3S01_RS11355 PF01435 Peptidase family M48 Vc3S01_RS11370 PF08241 Methyltransferase domain Vc3S01_RS11375 PF00155 Aminotransferase class I and II Vc3S01_RS11380 PF04055 Radical SAM superfamily Vc3S01_RS11380 PF06968 Biotin and Thiamin Synthesis associated domain Vc3S01_RS11385 PF00202 Aminotransferase class-III Vc3S01_RS11390 PF01258 Prokaryotic dksA/traR C4-type zinc finger Vc3S01_RS11405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Vc3S01_RS11405 PF02403 Seryl-tRNA synthetase N-terminal domain Vc3S01_RS11410 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS11410 PF16193 AAA C-terminal domain Vc3S01_RS11410 PF12002 MgsA AAA+ ATPase C terminal Vc3S01_RS11415 PF03548 Outer membrane lipoprotein carrier protein LolA Vc3S01_RS11420 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Vc3S01_RS11420 PF17854 FtsK alpha domain Vc3S01_RS11420 PF09397 Ftsk gamma domain Vc3S01_RS11420 PF01580 FtsK/SpoIIIE family Vc3S01_RS11425 PF01037 Lrp/AsnC ligand binding domain Vc3S01_RS11430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Vc3S01_RS11430 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Vc3S01_RS11440 PF03466 LysR substrate binding domain Vc3S01_RS11440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS11450 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) Vc3S01_RS11465 PF01979 Amidohydrolase family Vc3S01_RS11470 PF01752 Collagenase Vc3S01_RS11470 PF04151 Bacterial pre-peptidase C-terminal domain Vc3S01_RS11470 PF08453 Peptidase family M9 N-terminal Vc3S01_RS11490 PF03372 Endonuclease/Exonuclease/phosphatase family Vc3S01_RS11500 PF00579 tRNA synthetases class I (W and Y) Vc3S01_RS11505 PF00141 Peroxidase Vc3S01_RS11510 PF01464 Transglycosylase SLT domain Vc3S01_RS11510 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS11525 PF03606 C4-dicarboxylate anaerobic carrier Vc3S01_RS11530 PF07687 Peptidase dimerisation domain Vc3S01_RS11530 PF01546 Peptidase family M20/M25/M40 Vc3S01_RS11535 PF07729 FCD domain Vc3S01_RS11535 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS11545 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS11550 PF00529 HlyD membrane-fusion protein of T1SS Vc3S01_RS11550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS11565 PF02743 Cache domain Vc3S01_RS11565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS11565 PF00672 HAMP domain Vc3S01_RS11575 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS11580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS11585 PF00005 ABC transporter Vc3S01_RS11585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS11590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS11590 PF00005 ABC transporter Vc3S01_RS11595 PF01554 MatE Vc3S01_RS11605 PF03831 PhnA domain Vc3S01_RS11605 PF08274 PhnA Zinc-Ribbon Vc3S01_RS11625 PF00884 Sulfatase Vc3S01_RS11655 PF05844 YopD protein Vc3S01_RS11665 PF07720 Tetratricopeptide repeat Vc3S01_RS11670 PF04792 V antigen (LcrV) protein Vc3S01_RS11680 PF09621 Type III secretion system regulator (LcrR) Vc3S01_RS11685 PF00771 FHIPEP family Vc3S01_RS11705 PF09059 TyeA Vc3S01_RS11710 PF07201 HrpJ-like domain Vc3S01_RS11715 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vc3S01_RS11715 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vc3S01_RS11715 PF18269 T3SS EscN ATPase C-terminal domain Vc3S01_RS11730 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vc3S01_RS11735 PF00813 FliP family Vc3S01_RS11740 PF01313 Bacterial export proteins, family 3 Vc3S01_RS11745 PF01311 Bacterial export proteins, family 1 Vc3S01_RS11750 PF01312 FlhB HrpN YscU SpaS Family Vc3S01_RS11765 PF02661 Fic/DOC family Vc3S01_RS11785 PF02108 Flagellar assembly protein FliH Vc3S01_RS11795 PF01514 Secretory protein of YscJ/FliF family Vc3S01_RS11800 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI Vc3S01_RS11815 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF Vc3S01_RS11830 PF00263 Bacterial type II and III secretion system protein Vc3S01_RS11830 PF03958 Bacterial type II/III secretion system short domain Vc3S01_RS11845 PF12833 Helix-turn-helix domain Vc3S01_RS11895 PF06610 L-alanine exporter Vc3S01_RS11900 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS11900 PF00072 Response regulator receiver domain Vc3S01_RS11900 PF09308 LuxQ, periplasmic Vc3S01_RS11900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS11910 PF03738 Glutathionylspermidine synthase preATP-grasp Vc3S01_RS11920 PF03994 Domain of Unknown Function (DUF350) Vc3S01_RS11930 PF02445 Quinolinate synthetase A protein Vc3S01_RS11935 PF16331 TolA binding protein trimerisation Vc3S01_RS11935 PF13174 Tetratricopeptide repeat Vc3S01_RS11940 PF00691 OmpA family Vc3S01_RS11945 PF04052 TolB amino-terminal domain Vc3S01_RS11945 PF07676 WD40-like Beta Propeller Repeat Vc3S01_RS11955 PF02472 Biopolymer transport protein ExbD/TolR Vc3S01_RS11960 PF01618 MotA/TolQ/ExbB proton channel family Vc3S01_RS11965 PF03061 Thioesterase superfamily Vc3S01_RS11975 PF08173 Membrane bound YbgT-like protein Vc3S01_RS11980 PF02322 Cytochrome bd terminal oxidase subunit II Vc3S01_RS11985 PF01654 Cytochrome bd terminal oxidase subunit I Vc3S01_RS11990 PF17864 RuvB AAA lid domain Vc3S01_RS11990 PF05491 RuvB C-terminal winged helix domain Vc3S01_RS11990 PF05496 Holliday junction DNA helicase RuvB P-loop domain Vc3S01_RS11995 PF07499 RuvA, C-terminal domain Vc3S01_RS11995 PF01330 RuvA N terminal domain Vc3S01_RS12000 PF02203 Tar ligand binding domain homologue Vc3S01_RS12000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS12000 PF00672 HAMP domain Vc3S01_RS12005 PF02075 Crossover junction endodeoxyribonuclease RuvC Vc3S01_RS12010 PF01336 OB-fold nucleic acid binding domain Vc3S01_RS12010 PF02938 GAD domain Vc3S01_RS12010 PF00152 tRNA synthetases class II (D, K and N) Vc3S01_RS12015 PF01904 Protein of unknown function DUF72 Vc3S01_RS12020 PF13649 Methyltransferase domain Vc3S01_RS12025 PF08003 Protein of unknown function (DUF1698) Vc3S01_RS12035 PF08443 RimK-like ATP-grasp domain Vc3S01_RS12035 PF18030 RimK PreATP-grasp domain Vc3S01_RS12055 PF05199 GMC oxidoreductase Vc3S01_RS12055 PF00732 GMC oxidoreductase Vc3S01_RS12060 PF00501 AMP-binding enzyme Vc3S01_RS12060 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS12065 PF00171 Aldehyde dehydrogenase family Vc3S01_RS12070 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Vc3S01_RS12070 PF12833 Helix-turn-helix domain Vc3S01_RS12075 PF16330 MukB hinge domain Vc3S01_RS12075 PF04310 MukB N-terminal Vc3S01_RS12080 PF04288 MukE-like family Vc3S01_RS12085 PF17192 MukF middle domain Vc3S01_RS12085 PF17193 MukF C-terminal domain Vc3S01_RS12085 PF03882 MukF winged-helix domain Vc3S01_RS12090 PF13847 Methyltransferase domain Vc3S01_RS12095 PF02698 DUF218 domain Vc3S01_RS12100 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS12100 PF00072 Response regulator receiver domain Vc3S01_RS12105 PF02613 Nitrate reductase delta subunit Vc3S01_RS12110 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS12115 PF04993 TfoX N-terminal domain Vc3S01_RS12115 PF04994 TfoX C-terminal domain Vc3S01_RS12135 PF08323 Starch synthase catalytic domain Vc3S01_RS12135 PF00534 Glycosyl transferases group 1 Vc3S01_RS12140 PF00483 Nucleotidyl transferase Vc3S01_RS12145 PF01131 DNA topoisomerase Vc3S01_RS12145 PF01396 Topoisomerase DNA binding C4 zinc finger Vc3S01_RS12145 PF01751 Toprim domain Vc3S01_RS12145 PF08272 Topoisomerase I zinc-ribbon-like Vc3S01_RS12150 PF10692 Protein of unknown function (DUF2498) Vc3S01_RS12155 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Vc3S01_RS12165 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Vc3S01_RS12170 PF04377 Arginine-tRNA-protein transferase, C terminus Vc3S01_RS12170 PF04376 Arginine-tRNA-protein transferase, N terminus Vc3S01_RS12175 PF01176 Translation initiation factor 1A / IF-1 Vc3S01_RS12180 PF07724 AAA domain (Cdc48 subfamily) Vc3S01_RS12180 PF17871 AAA lid domain Vc3S01_RS12180 PF10431 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS12180 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS12180 PF02861 Clp amino terminal domain, pathogenicity island component Vc3S01_RS12185 PF02617 ATP-dependent Clp protease adaptor protein ClpS Vc3S01_RS12190 PF00313 'Cold-shock' DNA-binding domain Vc3S01_RS12195 PF03971 Monomeric isocitrate dehydrogenase Vc3S01_RS12200 PF00849 RNA pseudouridylate synthase Vc3S01_RS12205 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Vc3S01_RS12210 PF13609 Gram-negative porin Vc3S01_RS12215 PF13307 Helicase C-terminal domain Vc3S01_RS12215 PF06733 DEAD_2 Vc3S01_RS12220 PF01925 Sulfite exporter TauE/SafE Vc3S01_RS12225 PF07445 Primosomal replication protein priC Vc3S01_RS12230 PF10689 Protein of unknown function (DUF2496) Vc3S01_RS12235 PF03372 Endonuclease/Exonuclease/phosphatase family Vc3S01_RS12240 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS12245 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS12250 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS12255 PF00005 ABC transporter Vc3S01_RS12275 PF01228 Glycine radical Vc3S01_RS12275 PF02901 Pyruvate formate lyase-like Vc3S01_RS12285 PF04055 Radical SAM superfamily Vc3S01_RS12295 PF03887 YfbU domain Vc3S01_RS12300 PF06798 PrkA serine protein kinase C-terminal domain Vc3S01_RS12300 PF08298 PrkA AAA domain Vc3S01_RS12305 PF04285 Protein of unknown function (DUF444) Vc3S01_RS12310 PF04293 SpoVR like protein Vc3S01_RS12315 PF02348 Cytidylyltransferase Vc3S01_RS12320 PF03966 Trm112p-like protein Vc3S01_RS12325 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Vc3S01_RS12330 PF00664 ABC transporter transmembrane region Vc3S01_RS12330 PF00005 ABC transporter Vc3S01_RS12335 PF03772 Competence protein Vc3S01_RS12335 PF13567 Domain of unknown function (DUF4131) Vc3S01_RS12335 PF00753 Metallo-beta-lactamase superfamily Vc3S01_RS12345 PF02687 FtsX-like permease family Vc3S01_RS12345 PF12704 MacB-like periplasmic core domain Vc3S01_RS12350 PF00005 ABC transporter Vc3S01_RS12355 PF02687 FtsX-like permease family Vc3S01_RS12355 PF12704 MacB-like periplasmic core domain Vc3S01_RS12365 PF00270 DEAD/DEAH box helicase Vc3S01_RS12365 PF02559 CarD-like/TRCF domain Vc3S01_RS12365 PF00271 Helicase conserved C-terminal domain Vc3S01_RS12365 PF17757 UvrB interaction domain Vc3S01_RS12365 PF03461 TRCF domain Vc3S01_RS12380 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS12385 PF05728 Uncharacterised protein family (UPF0227) Vc3S01_RS12395 PF13036 Peptidoglycan-synthase activator LpoB Vc3S01_RS12395 PF08139 Prokaryotic membrane lipoprotein lipid attachment site Vc3S01_RS12410 PF01230 HIT domain Vc3S01_RS12415 PF00672 HAMP domain Vc3S01_RS12415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS12425 PF01048 Phosphorylase superfamily Vc3S01_RS12430 PF00403 Heavy-metal-associated domain Vc3S01_RS12435 PF01554 MatE Vc3S01_RS12440 PF00478 IMP dehydrogenase / GMP reductase domain Vc3S01_RS12440 PF00571 CBS domain Vc3S01_RS12450 PF00037 4Fe-4S binding domain Vc3S01_RS12450 PF11953 Domain of unknown function (DUF3470) Vc3S01_RS12455 PF08032 RNA 2'-O ribose methyltransferase substrate binding Vc3S01_RS12455 PF00588 SpoU rRNA Methylase family Vc3S01_RS12465 PF08448 PAS fold Vc3S01_RS12465 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS12475 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Vc3S01_RS12480 PF09619 Type III secretion system lipoprotein chaperone (YscW) Vc3S01_RS12490 PF01037 Lrp/AsnC ligand binding domain Vc3S01_RS12490 PF13404 AsnC-type helix-turn-helix domain Vc3S01_RS12495 PF00291 Pyridoxal-phosphate dependent enzyme Vc3S01_RS12515 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS12520 PF13533 Biotin-lipoyl like Vc3S01_RS12565 PF07690 Major Facilitator Superfamily Vc3S01_RS12570 PF03601 Conserved hypothetical protein 698 Vc3S01_RS12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS12575 PF03466 LysR substrate binding domain Vc3S01_RS12580 PF00367 phosphotransferase system, EIIB Vc3S01_RS12580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Vc3S01_RS12580 PF02378 Phosphotransferase system, EIIC Vc3S01_RS12585 PF00501 AMP-binding enzyme Vc3S01_RS12585 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS12590 PF13378 Enolase C-terminal domain-like Vc3S01_RS12595 PF00378 Enoyl-CoA hydratase/isomerase Vc3S01_RS12600 PF12697 Alpha/beta hydrolase family Vc3S01_RS12605 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vc3S01_RS12605 PF16582 Middle domain of thiamine pyrophosphate Vc3S01_RS12605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vc3S01_RS12610 PF00425 chorismate binding enzyme Vc3S01_RS12615 PF00155 Aminotransferase class I and II Vc3S01_RS12625 PF13286 Phosphohydrolase-associated domain Vc3S01_RS12625 PF01966 HD domain Vc3S01_RS12645 PF13145 PPIC-type PPIASE domain Vc3S01_RS12650 PF00216 Bacterial DNA-binding protein Vc3S01_RS12655 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS12655 PF05362 Lon protease (S16) C-terminal proteolytic domain Vc3S01_RS12655 PF02190 ATP-dependent protease La (LON) substrate-binding domain Vc3S01_RS12660 PF07724 AAA domain (Cdc48 subfamily) Vc3S01_RS12660 PF06689 ClpX C4-type zinc finger Vc3S01_RS12660 PF10431 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS12665 PF00574 Clp protease Vc3S01_RS12670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vc3S01_RS12670 PF05698 Bacterial trigger factor protein (TF) C-terminus Vc3S01_RS12670 PF05697 Bacterial trigger factor protein (TF) Vc3S01_RS12675 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS12675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS12675 PF02743 Cache domain Vc3S01_RS12680 PF00072 Response regulator receiver domain Vc3S01_RS12680 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS12680 PF00158 Sigma-54 interaction domain Vc3S01_RS12690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vc3S01_RS12695 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vc3S01_RS12700 PF03480 Bacterial extracellular solute-binding protein, family 7 Vc3S01_RS12705 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Vc3S01_RS12715 PF02386 Cation transport protein Vc3S01_RS12720 PF02254 TrkA-N domain Vc3S01_RS12720 PF02080 TrkA-C domain Vc3S01_RS12725 PF00271 Helicase conserved C-terminal domain Vc3S01_RS12725 PF00270 DEAD/DEAH box helicase Vc3S01_RS12730 PF03471 Transporter associated domain Vc3S01_RS12730 PF00571 CBS domain Vc3S01_RS12730 PF01595 Cyclin M transmembrane N-terminal domain Vc3S01_RS12735 PF00593 TonB dependent receptor Vc3S01_RS12735 PF07715 TonB-dependent Receptor Plug Domain Vc3S01_RS12740 PF01648 4'-phosphopantetheinyl transferase superfamily Vc3S01_RS12740 PF17837 4'-phosphopantetheinyl transferase N-terminal domain Vc3S01_RS12750 PF00550 Phosphopantetheine attachment site Vc3S01_RS12750 PF00550 Phosphopantetheine attachment site Vc3S01_RS12750 PF00668 Condensation domain Vc3S01_RS12750 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS12750 PF00501 AMP-binding enzyme Vc3S01_RS12750 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS12750 PF00668 Condensation domain Vc3S01_RS12750 PF00975 Thioesterase domain Vc3S01_RS12750 PF00975 Thioesterase domain Vc3S01_RS12750 PF00501 AMP-binding enzyme Vc3S01_RS12755 PF00857 Isochorismatase family Vc3S01_RS12755 PF00550 Phosphopantetheine attachment site Vc3S01_RS12760 PF00501 AMP-binding enzyme Vc3S01_RS12760 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS12765 PF00425 chorismate binding enzyme Vc3S01_RS12810 PF00266 Aminotransferase class-V Vc3S01_RS12830 PF04851 Type III restriction enzyme, res subunit Vc3S01_RS12830 PF02151 UvrB/uvrC motif Vc3S01_RS12830 PF12344 Ultra-violet resistance protein B Vc3S01_RS12830 PF00271 Helicase conserved C-terminal domain Vc3S01_RS12830 PF17757 UvrB interaction domain Vc3S01_RS12870 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Vc3S01_RS12870 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Vc3S01_RS12875 PF04480 Protein of unknown function (DUF559) Vc3S01_RS12880 PF07662 Na+ dependent nucleoside transporter C-terminus Vc3S01_RS12880 PF07670 Nucleoside recognition Vc3S01_RS12880 PF01773 Na+ dependent nucleoside transporter N-terminus Vc3S01_RS12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS12885 PF03466 LysR substrate binding domain Vc3S01_RS12890 PF13406 Transglycosylase SLT domain Vc3S01_RS12895 PF05166 YcgL domain Vc3S01_RS12900 PF03775 Septum formation inhibitor MinC, C-terminal domain Vc3S01_RS12900 PF05209 Septum formation inhibitor MinC, N-terminal domain Vc3S01_RS12905 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Vc3S01_RS12910 PF03776 Septum formation topological specificity factor MinE Vc3S01_RS12915 PF00570 HRDC domain Vc3S01_RS12915 PF01612 3'-5' exonuclease Vc3S01_RS12920 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS12920 PF00501 AMP-binding enzyme Vc3S01_RS12925 PF12697 Alpha/beta hydrolase family Vc3S01_RS12930 PF03843 Outer membrane lipoprotein Slp family Vc3S01_RS12940 PF00814 Glycoprotease family Vc3S01_RS12945 PF13307 Helicase C-terminal domain Vc3S01_RS12945 PF04851 Type III restriction enzyme, res subunit Vc3S01_RS12955 PF00551 Formyl transferase Vc3S01_RS12955 PF01842 ACT domain Vc3S01_RS12960 PF00089 Trypsin Vc3S01_RS12970 PF06185 YecM protein Vc3S01_RS12975 PF03485 Arginyl tRNA synthetase N terminal domain Vc3S01_RS12975 PF00750 tRNA synthetases class I (R) Vc3S01_RS12975 PF05746 DALR anticodon binding domain Vc3S01_RS12995 PF17910 FeoB cytosolic helical domain Vc3S01_RS12995 PF07664 Ferrous iron transport protein B C terminus Vc3S01_RS12995 PF02421 Ferrous iron transport protein B Vc3S01_RS12995 PF07670 Nucleoside recognition Vc3S01_RS13000 PF04023 FeoA domain Vc3S01_RS13005 PF02311 AraC-like ligand binding domain Vc3S01_RS13005 PF12833 Helix-turn-helix domain Vc3S01_RS13010 PF01297 Zinc-uptake complex component A periplasmic Vc3S01_RS13015 PF00005 ABC transporter Vc3S01_RS13020 PF00950 ABC 3 transport family Vc3S01_RS13025 PF00549 CoA-ligase Vc3S01_RS13025 PF02629 CoA binding domain Vc3S01_RS13030 PF00549 CoA-ligase Vc3S01_RS13030 PF08442 ATP-grasp domain Vc3S01_RS13035 PF00364 Biotin-requiring enzyme Vc3S01_RS13035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vc3S01_RS13035 PF02817 e3 binding domain Vc3S01_RS13040 PF16078 2-oxoglutarate dehydrogenase N-terminus Vc3S01_RS13040 PF00676 Dehydrogenase E1 component Vc3S01_RS13040 PF16870 2-oxoglutarate dehydrogenase C-terminal Vc3S01_RS13040 PF02779 Transketolase, pyrimidine binding domain Vc3S01_RS13045 PF13085 2Fe-2S iron-sulfur cluster binding domain Vc3S01_RS13050 PF02910 Fumarate reductase flavoprotein C-term Vc3S01_RS13050 PF00890 FAD binding domain Vc3S01_RS13055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Vc3S01_RS13060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Vc3S01_RS13065 PF00285 Citrate synthase, C-terminal domain Vc3S01_RS13070 PF01784 NIF3 (NGG1p interacting factor 3) Vc3S01_RS13085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vc3S01_RS13085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vc3S01_RS13085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vc3S01_RS13085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vc3S01_RS13090 PF03925 SeqA protein C-terminal domain Vc3S01_RS13090 PF17206 SeqA protein N-terminal domain Vc3S01_RS13095 PF12697 Alpha/beta hydrolase family Vc3S01_RS13105 PF00258 Flavodoxin Vc3S01_RS13115 PF01475 Ferric uptake regulator family Vc3S01_RS13120 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS13125 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vc3S01_RS13125 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain Vc3S01_RS13130 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Vc3S01_RS13130 PF00367 phosphotransferase system, EIIB Vc3S01_RS13130 PF02378 Phosphotransferase system, EIIC Vc3S01_RS13140 PF01979 Amidohydrolase family Vc3S01_RS13145 PF00480 ROK family Vc3S01_RS13145 PF01047 MarR family Vc3S01_RS13150 PF00999 Sodium/hydrogen exchanger family Vc3S01_RS13150 PF02254 TrkA-N domain Vc3S01_RS13155 PF13537 Glutamine amidotransferase domain Vc3S01_RS13155 PF00733 Asparagine synthase Vc3S01_RS13160 PF02357 Transcription termination factor nusG Vc3S01_RS13165 PF00854 POT family Vc3S01_RS13170 PF00762 Ferrochelatase Vc3S01_RS13175 PF05191 Adenylate kinase, active site lid Vc3S01_RS13180 PF00183 Hsp90 protein Vc3S01_RS13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS13185 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS13190 PF17323 Trans-membrane regulatory protein ToxS Vc3S01_RS13205 PF12850 Calcineurin-like phosphoesterase superfamily domain Vc3S01_RS13225 PF07556 Protein of unknown function (DUF1538) Vc3S01_RS13230 PF07556 Protein of unknown function (DUF1538) Vc3S01_RS13235 PF01370 NAD dependent epimerase/dehydratase family Vc3S01_RS13235 PF08338 Domain of unknown function (DUF1731) Vc3S01_RS13240 PF00106 short chain dehydrogenase Vc3S01_RS13250 PF00085 Thioredoxin Vc3S01_RS13255 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) Vc3S01_RS13260 PF01270 Glycosyl hydrolases family 8 Vc3S01_RS13265 PF03170 Bacterial cellulose synthase subunit Vc3S01_RS13270 PF00535 Glycosyl transferase family 2 Vc3S01_RS13270 PF07238 PilZ domain Vc3S01_RS13270 PF03552 Cellulose synthase Vc3S01_RS13275 PF06564 Cellulose biosynthesis protein BcsQ Vc3S01_RS13290 PF11658 Cellulose biosynthesis protein BcsG Vc3S01_RS13295 PF16200 C-terminal region of band_7 Vc3S01_RS13295 PF01145 SPFH domain / Band 7 family Vc3S01_RS13320 PF00533 BRCA1 C Terminus (BRCT) domain Vc3S01_RS13320 PF03120 NAD-dependent DNA ligase OB-fold domain Vc3S01_RS13320 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Vc3S01_RS13320 PF12826 Helix-hairpin-helix motif Vc3S01_RS13320 PF01653 NAD-dependent DNA ligase adenylation domain Vc3S01_RS13325 PF04354 ZipA, C-terminal FtsZ-binding domain Vc3S01_RS13335 PF00291 Pyridoxal-phosphate dependent enzyme Vc3S01_RS13345 PF00381 PTS HPr component phosphorylation site Vc3S01_RS13350 PF00391 PEP-utilising enzyme, mobile domain Vc3S01_RS13350 PF05524 PEP-utilising enzyme, N-terminal Vc3S01_RS13350 PF02896 PEP-utilising enzyme, TIM barrel domain Vc3S01_RS13355 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Vc3S01_RS13360 PF07196 Flagellin hook IN motif Vc3S01_RS13360 PF00669 Bacterial flagellin N-terminal helical region Vc3S01_RS13360 PF00700 Bacterial flagellin C-terminal helical region Vc3S01_RS13365 PF07196 Flagellin hook IN motif Vc3S01_RS13365 PF00669 Bacterial flagellin N-terminal helical region Vc3S01_RS13365 PF00700 Bacterial flagellin C-terminal helical region Vc3S01_RS13375 PF07196 Flagellin hook IN motif Vc3S01_RS13375 PF00700 Bacterial flagellin C-terminal helical region Vc3S01_RS13375 PF00669 Bacterial flagellin N-terminal helical region Vc3S01_RS13385 PF07196 Flagellin hook IN motif Vc3S01_RS13385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS13390 PF10135 Rod binding protein Vc3S01_RS13390 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Vc3S01_RS13395 PF02119 Flagellar P-ring protein Vc3S01_RS13400 PF02107 Flagellar L-ring protein Vc3S01_RS13405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS13405 PF00460 Flagella basal body rod protein Vc3S01_RS13410 PF00460 Flagella basal body rod protein Vc3S01_RS13410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS13415 PF07559 Flagellar basal body protein FlaE Vc3S01_RS13415 PF00460 Flagella basal body rod protein Vc3S01_RS13415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS13420 PF13860 FlgD Ig-like domain Vc3S01_RS13420 PF03963 Flagellar hook capping protein - N-terminal region Vc3S01_RS13420 PF13861 FlgD Tudor-like domain Vc3S01_RS13425 PF00460 Flagella basal body rod protein Vc3S01_RS13425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS13430 PF00460 Flagella basal body rod protein Vc3S01_RS13435 PF01739 CheR methyltransferase, SAM binding domain Vc3S01_RS13435 PF03705 CheR methyltransferase, all-alpha domain Vc3S01_RS13440 PF00072 Response regulator receiver domain Vc3S01_RS13440 PF01584 CheW-like domain Vc3S01_RS13485 PF00691 OmpA family Vc3S01_RS13485 PF01389 OmpA-like transmembrane domain Vc3S01_RS13495 PF00749 tRNA synthetases class I (E and Q), catalytic domain Vc3S01_RS13500 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Vc3S01_RS13505 PF13609 Gram-negative porin Vc3S01_RS13515 PF00403 Heavy-metal-associated domain Vc3S01_RS13530 PF03173 Putative carbohydrate binding domain Vc3S01_RS13530 PF00728 Glycosyl hydrolase family 20, catalytic domain Vc3S01_RS13530 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain Vc3S01_RS13530 PF02838 Glycosyl hydrolase family 20, domain 2 Vc3S01_RS13555 PF01713 Smr domain Vc3S01_RS13560 PF01479 S4 domain Vc3S01_RS13560 PF00849 RNA pseudouridylate synthase Vc3S01_RS13565 PF04073 Aminoacyl-tRNA editing domain Vc3S01_RS13570 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS13570 PF02872 5'-nucleotidase, C-terminal domain Vc3S01_RS13580 PF00793 DAHP synthetase I family Vc3S01_RS13585 PF13369 Transglutaminase-like superfamily Vc3S01_RS13590 PF04247 Invasion gene expression up-regulator, SirB Vc3S01_RS13595 PF17827 PrmC N-terminal domain Vc3S01_RS13595 PF13847 Methyltransferase domain Vc3S01_RS13600 PF03462 PCRF domain Vc3S01_RS13600 PF00472 RF-1 domain Vc3S01_RS13605 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain Vc3S01_RS13605 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain Vc3S01_RS13605 PF01488 Shikimate / quinate 5-dehydrogenase Vc3S01_RS13610 PF03550 Outer membrane lipoprotein LolB Vc3S01_RS13615 PF00288 GHMP kinases N terminal domain Vc3S01_RS13615 PF08544 GHMP kinases C terminal Vc3S01_RS13620 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Vc3S01_RS13620 PF14572 Phosphoribosyl synthetase-associated domain Vc3S01_RS13625 PF01195 Peptidyl-tRNA hydrolase Vc3S01_RS13630 PF06071 Protein of unknown function (DUF933) Vc3S01_RS13630 PF01926 50S ribosome-binding GTPase Vc3S01_RS13745 PF01494 FAD binding domain Vc3S01_RS13750 PF01938 TRAM domain Vc3S01_RS13750 PF04055 Radical SAM superfamily Vc3S01_RS13750 PF00919 Uncharacterized protein family UPF0004 Vc3S01_RS13755 PF02562 PhoH-like protein Vc3S01_RS13760 PF02130 Uncharacterized protein family UPF0054 Vc3S01_RS13765 PF00571 CBS domain Vc3S01_RS13765 PF03471 Transporter associated domain Vc3S01_RS13770 PF00795 Carbon-nitrogen hydrolase Vc3S01_RS13775 PF07295 Zinc-ribbon containing domain Vc3S01_RS13780 PF08264 Anticodon-binding domain of tRNA Vc3S01_RS13780 PF00133 tRNA synthetases class I (I, L, M and V) Vc3S01_RS13780 PF13603 Leucyl-tRNA synthetase, Domain 2 Vc3S01_RS13785 PF04390 Lipopolysaccharide-assembly Vc3S01_RS13790 PF14840 Processivity clamp loader gamma complex DNA pol III C-term Vc3S01_RS13790 PF06144 DNA polymerase III, delta subunit Vc3S01_RS13800 PF02590 Predicted SPOUT methyltransferase Vc3S01_RS13805 PF03717 Penicillin-binding Protein dimerisation domain Vc3S01_RS13805 PF00905 Penicillin binding protein transpeptidase domain Vc3S01_RS13810 PF01098 Cell cycle protein Vc3S01_RS13815 PF05036 Sporulation related domain Vc3S01_RS13815 PF03330 Lytic transglycolase Vc3S01_RS13820 PF07943 Penicillin-binding protein 5, C-terminal domain Vc3S01_RS13820 PF00768 D-alanyl-D-alanine carboxypeptidase Vc3S01_RS13825 PF04359 Protein of unknown function (DUF493) Vc3S01_RS13830 PF03099 Biotin/lipoate A/B protein ligase family Vc3S01_RS13835 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Vc3S01_RS13835 PF04055 Radical SAM superfamily Vc3S01_RS13840 PF00464 Serine hydroxymethyltransferase Vc3S01_RS13845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) Vc3S01_RS13845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Vc3S01_RS13860 PF16657 Maltogenic Amylase, C-terminal domain Vc3S01_RS13860 PF00128 Alpha amylase, catalytic domain Vc3S01_RS13865 PF02378 Phosphotransferase system, EIIC Vc3S01_RS13865 PF00367 phosphotransferase system, EIIB Vc3S01_RS13870 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS13880 PF00005 ABC transporter Vc3S01_RS13880 PF09383 NIL domain Vc3S01_RS13885 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS13890 PF03180 NLPA lipoprotein Vc3S01_RS13900 PF02872 5'-nucleotidase, C-terminal domain Vc3S01_RS13900 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS13905 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) Vc3S01_RS13910 PF07348 Syd protein (SUKH-2) Vc3S01_RS13915 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term Vc3S01_RS13915 PF14489 QueF-like protein Vc3S01_RS13925 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS13930 PF03641 Possible lysine decarboxylase Vc3S01_RS13930 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases Vc3S01_RS13930 PF11892 Domain of unknown function (DUF3412) Vc3S01_RS13935 PF01367 5'-3' exonuclease, C-terminal SAM fold Vc3S01_RS13935 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Vc3S01_RS13945 PF18125 RlmM ferredoxin-like domain Vc3S01_RS13945 PF01728 FtsJ-like methyltransferase Vc3S01_RS13950 PF04241 Protein of unknown function (DUF423) Vc3S01_RS13960 PF03466 LysR substrate binding domain Vc3S01_RS13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS13965 PF02926 THUMP domain Vc3S01_RS13965 PF02568 Thiamine biosynthesis protein (ThiI) Vc3S01_RS13970 PF00691 OmpA family Vc3S01_RS13970 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vc3S01_RS13975 PF01618 MotA/TolQ/ExbB proton channel family Vc3S01_RS13980 PF02609 Exonuclease VII small subunit Vc3S01_RS13985 PF00348 Polyprenyl synthetase Vc3S01_RS13990 PF02780 Transketolase, C-terminal domain Vc3S01_RS13990 PF02779 Transketolase, pyrimidine binding domain Vc3S01_RS13990 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Vc3S01_RS13995 PF04608 Phosphatidylglycerophosphatase A Vc3S01_RS14000 PF02769 AIR synthase related protein, C-terminal domain Vc3S01_RS14000 PF00586 AIR synthase related protein, N-terminal domain Vc3S01_RS14005 PF01029 NusB family Vc3S01_RS14010 PF00885 6,7-dimethyl-8-ribityllumazine synthase Vc3S01_RS14015 PF00925 GTP cyclohydrolase II Vc3S01_RS14015 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Vc3S01_RS14020 PF00677 Lumazine binding domain Vc3S01_RS14025 PF01872 RibD C-terminal domain Vc3S01_RS14025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vc3S01_RS14030 PF03477 ATP cone domain Vc3S01_RS14035 PF00171 Aldehyde dehydrogenase family Vc3S01_RS14040 PF00696 Amino acid kinase family Vc3S01_RS14040 PF01472 PUA domain Vc3S01_RS14045 PF07417 Sigma factor-binding transcriptional regulator Crl Vc3S01_RS14050 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) Vc3S01_RS14055 PF00156 Phosphoribosyl transferase domain Vc3S01_RS14060 PF00860 Permease family Vc3S01_RS14065 PF01546 Peptidase family M20/M25/M40 Vc3S01_RS14065 PF07687 Peptidase dimerisation domain Vc3S01_RS14090 PF02769 AIR synthase related protein, C-terminal domain Vc3S01_RS14090 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Vc3S01_RS14090 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal Vc3S01_RS14095 PF01464 Transglycosylase SLT domain Vc3S01_RS14095 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS14105 PF14437 MafB19-like deaminase Vc3S01_RS14115 PF03806 AbgT putative transporter family Vc3S01_RS14140 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS14140 PF00114 Pilin (bacterial filament) Vc3S01_RS14145 PF00114 Pilin (bacterial filament) Vc3S01_RS14145 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS14150 PF01556 DnaJ C terminal domain Vc3S01_RS14150 PF00226 DnaJ domain Vc3S01_RS14150 PF00684 DnaJ central domain Vc3S01_RS14155 PF00012 Hsp70 protein Vc3S01_RS14160 PF00375 Sodium:dicarboxylate symporter family Vc3S01_RS14165 PF01025 GrpE Vc3S01_RS14170 PF01513 ATP-NAD kinase Vc3S01_RS14175 PF02463 RecF/RecN/SMC N terminal domain Vc3S01_RS14180 PF04355 SmpA / OmlA family Vc3S01_RS14185 PF03658 RnfH family Ubiquitin Vc3S01_RS14190 PF03364 Polyketide cyclase / dehydrase and lipid transport Vc3S01_RS14195 PF01668 SmpB protein Vc3S01_RS14205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS14205 PF03466 LysR substrate binding domain Vc3S01_RS14210 PF12805 FUSC-like inner membrane protein yccS Vc3S01_RS14230 PF00202 Aminotransferase class-III Vc3S01_RS14235 PF07969 Amidohydrolase family Vc3S01_RS14240 PF00924 Mechanosensitive ion channel Vc3S01_RS14255 PF00672 HAMP domain Vc3S01_RS14255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS14255 PF12729 Four helix bundle sensory module for signal transduction Vc3S01_RS14260 PF03466 LysR substrate binding domain Vc3S01_RS14260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS14265 PF01266 FAD dependent oxidoreductase Vc3S01_RS14270 PF01235 Sodium:alanine symporter family Vc3S01_RS14275 PF01184 GPR1/FUN34/yaaH family Vc3S01_RS14280 PF06483 Chitinase C Vc3S01_RS14280 PF00704 Glycosyl hydrolases family 18 Vc3S01_RS14285 PF03553 Na+/H+ antiporter family Vc3S01_RS14290 PF00117 Glutamine amidotransferase class-I Vc3S01_RS14290 PF00958 GMP synthase C terminal domain Vc3S01_RS14290 PF02540 NAD synthase Vc3S01_RS14295 PF00478 IMP dehydrogenase / GMP reductase domain Vc3S01_RS14295 PF00571 CBS domain Vc3S01_RS14300 PF13742 OB-fold nucleic acid binding domain Vc3S01_RS14300 PF02601 Exonuclease VII, large subunit Vc3S01_RS14310 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS14310 PF13185 GAF domain Vc3S01_RS14320 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Vc3S01_RS14320 PF01926 50S ribosome-binding GTPase Vc3S01_RS14325 PF13360 PQQ-like domain Vc3S01_RS14330 PF09976 Tetratricopeptide repeat-like domain Vc3S01_RS14335 PF13393 Histidyl-tRNA synthetase Vc3S01_RS14335 PF03129 Anticodon binding domain Vc3S01_RS14340 PF04551 GcpE protein Vc3S01_RS14345 PF13464 Domain of unknown function (DUF4115) Vc3S01_RS14350 PF04055 Radical SAM superfamily Vc3S01_RS14355 PF00334 Nucleoside diphosphate kinase Vc3S01_RS14360 PF00883 Cytosol aminopeptidase family, catalytic domain Vc3S01_RS14360 PF12404 Peptidase Vc3S01_RS14365 PF04384 Iron-sulphur cluster assembly Vc3S01_RS14370 PF00111 2Fe-2S iron-sulfur cluster binding domain Vc3S01_RS14375 PF00012 Hsp70 protein Vc3S01_RS14380 PF07743 HSCB C-terminal oligomerisation domain Vc3S01_RS14380 PF00226 DnaJ domain Vc3S01_RS14385 PF01521 Iron-sulphur cluster biosynthesis Vc3S01_RS14390 PF01592 NifU-like N terminal domain Vc3S01_RS14395 PF00266 Aminotransferase class-V Vc3S01_RS14400 PF02082 Transcriptional regulator Vc3S01_RS14405 PF00588 SpoU rRNA Methylase family Vc3S01_RS14410 PF00459 Inositol monophosphatase family Vc3S01_RS14415 PF07549 SecD/SecF GG Motif Vc3S01_RS14415 PF02355 Protein export membrane protein Vc3S01_RS14420 PF02355 Protein export membrane protein Vc3S01_RS14420 PF13721 SecD export protein N-terminal TM region Vc3S01_RS14420 PF07549 SecD/SecF GG Motif Vc3S01_RS14425 PF02699 Preprotein translocase subunit Vc3S01_RS14430 PF01702 Queuine tRNA-ribosyltransferase Vc3S01_RS14435 PF02547 Queuosine biosynthesis protein Vc3S01_RS14450 PF00571 CBS domain Vc3S01_RS14455 PF00463 Isocitrate lyase family Vc3S01_RS14460 PF01274 Malate synthase Vc3S01_RS14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS14465 PF03466 LysR substrate binding domain Vc3S01_RS14470 PF10417 C-terminal domain of 1-Cys peroxiredoxin Vc3S01_RS14470 PF00578 AhpC/TSA family Vc3S01_RS14475 PF03932 CutC family Vc3S01_RS14480 PF03976 Polyphosphate kinase 2 (PPK2) Vc3S01_RS14485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS14485 PF03466 LysR substrate binding domain Vc3S01_RS14500 PF01895 PhoU domain Vc3S01_RS14505 PF00005 ABC transporter Vc3S01_RS14510 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS14515 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS14520 PF17941 Polyphosphate kinase C-terminal domain 1 Vc3S01_RS14520 PF13090 Polyphosphate kinase C-terminal domain 2 Vc3S01_RS14520 PF13089 Polyphosphate kinase N-terminal domain Vc3S01_RS14520 PF02503 Polyphosphate kinase middle domain Vc3S01_RS14525 PF02541 Ppx/GppA phosphatase family Vc3S01_RS14530 PF12849 PBP superfamily domain Vc3S01_RS14535 PF11808 Phosphate regulon sensor protein PhoR Vc3S01_RS14535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS14535 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS14535 PF00989 PAS fold Vc3S01_RS14540 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS14540 PF00072 Response regulator receiver domain Vc3S01_RS14545 PF04381 Putative exonuclease, RdgC Vc3S01_RS14550 PF01136 Peptidase family U32 Vc3S01_RS14550 PF16325 Peptidase family U32 C-terminal domain Vc3S01_RS14555 PF00037 4Fe-4S binding domain Vc3S01_RS14565 PF03411 Penicillin-insensitive murein endopeptidase Vc3S01_RS14620 PF10431 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS14620 PF02861 Clp amino terminal domain, pathogenicity island component Vc3S01_RS14620 PF17871 AAA lid domain Vc3S01_RS14620 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS14620 PF07724 AAA domain (Cdc48 subfamily) Vc3S01_RS14625 PF02578 Multi-copper polyphenol oxidoreductase laccase Vc3S01_RS14630 PF00849 RNA pseudouridylate synthase Vc3S01_RS14630 PF01479 S4 domain Vc3S01_RS14635 PF13525 Outer membrane lipoprotein Vc3S01_RS14640 PF01464 Transglycosylase SLT domain Vc3S01_RS14645 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Vc3S01_RS14650 PF01817 Chorismate mutase type II Vc3S01_RS14650 PF00800 Prephenate dehydratase Vc3S01_RS14655 PF01931 Protein of unknown function DUF84 Vc3S01_RS14660 PF01371 Trp repressor protein Vc3S01_RS14665 PF01464 Transglycosylase SLT domain Vc3S01_RS14665 PF14718 Soluble lytic murein transglycosylase L domain Vc3S01_RS14670 PF12848 ABC transporter Vc3S01_RS14670 PF00005 ABC transporter Vc3S01_RS14675 PF07238 PilZ domain Vc3S01_RS14680 PF04225 Opacity-associated protein A LysM-like domain Vc3S01_RS14680 PF01551 Peptidase family M23 Vc3S01_RS14685 PF01817 Chorismate mutase type II Vc3S01_RS14685 PF02153 Prephenate dehydrogenase Vc3S01_RS14690 PF00793 DAHP synthetase I family Vc3S01_RS14695 PF00933 Glycosyl hydrolase family 3 N terminal domain Vc3S01_RS14700 PF03702 Anhydro-N-acetylmuramic acid kinase Vc3S01_RS14705 PF01380 SIS domain Vc3S01_RS14720 PF02554 Carbon starvation protein CstA Vc3S01_RS14725 PF07694 5TMR of 5TMR-LYT Vc3S01_RS14725 PF06580 Histidine kinase Vc3S01_RS14730 PF04397 LytTr DNA-binding domain Vc3S01_RS14730 PF00072 Response regulator receiver domain Vc3S01_RS14735 PF02401 LytB protein Vc3S01_RS14740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vc3S01_RS14745 PF01252 Signal peptidase (SPase) II Vc3S01_RS14750 PF06827 Zinc finger found in FPG and IleRS Vc3S01_RS14750 PF00133 tRNA synthetases class I (I, L, M and V) Vc3S01_RS14750 PF08264 Anticodon-binding domain of tRNA Vc3S01_RS14755 PF01687 Riboflavin kinase Vc3S01_RS14755 PF06574 FAD synthetase Vc3S01_RS14760 PF03023 Lipid II flippase MurJ Vc3S01_RS14765 PF01649 Ribosomal protein S20 Vc3S01_RS14770 PF01022 Bacterial regulatory protein, arsR family Vc3S01_RS14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS14775 PF03466 LysR substrate binding domain Vc3S01_RS14780 PF02690 Na+/Pi-cotransporter Vc3S01_RS14785 PF00303 Thymidylate synthase Vc3S01_RS14790 PF01790 Prolipoprotein diacylglyceryl transferase Vc3S01_RS14795 PF01925 Sulfite exporter TauE/SafE Vc3S01_RS14800 PF02896 PEP-utilising enzyme, TIM barrel domain Vc3S01_RS14800 PF00391 PEP-utilising enzyme, mobile domain Vc3S01_RS14800 PF05524 PEP-utilising enzyme, N-terminal Vc3S01_RS14800 PF01590 GAF domain Vc3S01_RS14805 PF00293 NUDIX domain Vc3S01_RS14810 PF02976 DNA mismatch repair enzyme MutH Vc3S01_RS14820 PF00248 Aldo/keto reductase family Vc3S01_RS14830 PF00072 Response regulator receiver domain Vc3S01_RS14830 PF00158 Sigma-54 interaction domain Vc3S01_RS14830 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS14835 PF00152 tRNA synthetases class II (D, K and N) Vc3S01_RS14835 PF01336 OB-fold nucleic acid binding domain Vc3S01_RS14845 PF02272 DHHA1 domain Vc3S01_RS14845 PF17768 RecJ OB domain Vc3S01_RS14845 PF01368 DHH family Vc3S01_RS14850 PF10411 Disulfide bond isomerase protein N-terminus Vc3S01_RS14850 PF13098 Thioredoxin-like domain Vc3S01_RS14855 PF02899 Phage integrase, N-terminal SAM-like domain Vc3S01_RS14855 PF00589 Phage integrase family Vc3S01_RS14860 PF00258 Flavodoxin Vc3S01_RS14865 PF05525 Branched-chain amino acid transport protein Vc3S01_RS14870 PF05175 Methyltransferase small domain Vc3S01_RS14875 PF00271 Helicase conserved C-terminal domain Vc3S01_RS14875 PF00270 DEAD/DEAH box helicase Vc3S01_RS14885 PF03883 Peroxide stress protein YaaA Vc3S01_RS14890 PF01235 Sodium:alanine symporter family Vc3S01_RS14905 PF03167 Uracil DNA glycosylase superfamily Vc3S01_RS14915 PF01261 Xylose isomerase-like TIM barrel Vc3S01_RS14920 PF01228 Glycine radical Vc3S01_RS14930 PF00291 Pyridoxal-phosphate dependent enzyme Vc3S01_RS14930 PF14821 Threonine synthase N terminus Vc3S01_RS14935 PF00288 GHMP kinases N terminal domain Vc3S01_RS14935 PF08544 GHMP kinases C terminal Vc3S01_RS14940 PF13840 ACT domain Vc3S01_RS14940 PF00742 Homoserine dehydrogenase Vc3S01_RS14940 PF03447 Homoserine dehydrogenase, NAD binding domain Vc3S01_RS14940 PF01842 ACT domain Vc3S01_RS14940 PF00696 Amino acid kinase family Vc3S01_RS14950 PF03737 Aldolase/RraA Vc3S01_RS14965 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS14965 PF00072 Response regulator receiver domain Vc3S01_RS14975 PF00072 Response regulator receiver domain Vc3S01_RS14975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS14975 PF18415 Histidine kinase receptor ArcB trans-membrane domain Vc3S01_RS14975 PF01627 Hpt domain Vc3S01_RS14975 PF00989 PAS fold Vc3S01_RS14975 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS14985 PF00563 EAL domain Vc3S01_RS14985 PF01590 GAF domain Vc3S01_RS14985 PF00360 Phytochrome region Vc3S01_RS14985 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS14990 PF16199 Radical_SAM C-terminal domain Vc3S01_RS14990 PF04055 Radical SAM superfamily Vc3S01_RS14995 PF01645 Conserved region in glutamate synthase Vc3S01_RS14995 PF00310 Glutamine amidotransferases class-II Vc3S01_RS14995 PF01493 GXGXG motif Vc3S01_RS14995 PF04898 Glutamate synthase central domain Vc3S01_RS15000 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS15000 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vc3S01_RS15005 PF01493 GXGXG motif Vc3S01_RS15005 PF00310 Glutamine amidotransferases class-II Vc3S01_RS15005 PF04898 Glutamate synthase central domain Vc3S01_RS15005 PF01645 Conserved region in glutamate synthase Vc3S01_RS15010 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS15010 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Vc3S01_RS15020 PF01048 Phosphorylase superfamily Vc3S01_RS15030 PF01497 Periplasmic binding protein Vc3S01_RS15035 PF03458 UPF0126 domain Vc3S01_RS15040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS15040 PF03466 LysR substrate binding domain Vc3S01_RS15045 PF01925 Sulfite exporter TauE/SafE Vc3S01_RS15060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Vc3S01_RS15060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Vc3S01_RS15060 PF02142 MGS-like domain Vc3S01_RS15065 PF00117 Glutamine amidotransferase class-I Vc3S01_RS15065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Vc3S01_RS15070 PF05173 Dihydrodipicolinate reductase, C-terminus Vc3S01_RS15070 PF01113 Dihydrodipicolinate reductase, N-terminus Vc3S01_RS15075 PF00293 NUDIX domain Vc3S01_RS15080 PF07516 SecA Wing and Scaffold domain Vc3S01_RS15080 PF01043 SecA preprotein cross-linking domain Vc3S01_RS15080 PF02810 SEC-C motif Vc3S01_RS15080 PF07517 SecA DEAD-like domain Vc3S01_RS15090 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Vc3S01_RS15095 PF00091 Tubulin/FtsZ family, GTPase domain Vc3S01_RS15095 PF12327 FtsZ family, C-terminal domain Vc3S01_RS15100 PF02491 SHS2 domain inserted in FTSA Vc3S01_RS15105 PF03799 Cell division protein FtsQ Vc3S01_RS15105 PF08478 POTRA domain, FtsQ-type Vc3S01_RS15110 PF08245 Mur ligase middle domain Vc3S01_RS15110 PF02875 Mur ligase family, glutamate ligase domain Vc3S01_RS15110 PF01225 Mur ligase family, catalytic domain Vc3S01_RS15115 PF04101 Glycosyltransferase family 28 C-terminal domain Vc3S01_RS15115 PF03033 Glycosyltransferase family 28 N-terminal domain Vc3S01_RS15120 PF01098 Cell cycle protein Vc3S01_RS15125 PF08245 Mur ligase middle domain Vc3S01_RS15125 PF02875 Mur ligase family, glutamate ligase domain Vc3S01_RS15130 PF00953 Glycosyl transferase family 4 Vc3S01_RS15130 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Vc3S01_RS15135 PF08245 Mur ligase middle domain Vc3S01_RS15135 PF02875 Mur ligase family, glutamate ligase domain Vc3S01_RS15135 PF01225 Mur ligase family, catalytic domain Vc3S01_RS15140 PF01225 Mur ligase family, catalytic domain Vc3S01_RS15140 PF08245 Mur ligase middle domain Vc3S01_RS15140 PF02875 Mur ligase family, glutamate ligase domain Vc3S01_RS15145 PF00905 Penicillin binding protein transpeptidase domain Vc3S01_RS15145 PF03717 Penicillin-binding Protein dimerisation domain Vc3S01_RS15150 PF04999 Cell division protein FtsL Vc3S01_RS15155 PF01795 MraW methylase family Vc3S01_RS15170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vc3S01_RS15175 PF04348 LppC putative lipoprotein Vc3S01_RS15180 PF02021 Uncharacterised protein family UPF0102 Vc3S01_RS15185 PF13580 SIS domain Vc3S01_RS15190 PF04972 BON domain Vc3S01_RS15195 PF04386 Stringent starvation protein B Vc3S01_RS15200 PF02798 Glutathione S-transferase, N-terminal domain Vc3S01_RS15200 PF00043 Glutathione S-transferase, C-terminal domain Vc3S01_RS15205 PF02167 Cytochrome C1 family Vc3S01_RS15210 PF00032 Cytochrome b(C-terminal)/b6/petD Vc3S01_RS15210 PF00033 Cytochrome b/b6/petB Vc3S01_RS15215 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Vc3S01_RS15215 PF00355 Rieske [2Fe-2S] domain Vc3S01_RS15220 PF00380 Ribosomal protein S9/S16 Vc3S01_RS15225 PF00572 Ribosomal protein L13 Vc3S01_RS15230 PF03969 AFG1-like ATPase Vc3S01_RS15235 PF06295 Protein of unknown function (DUF1043) Vc3S01_RS15240 PF00595 PDZ domain Vc3S01_RS15245 PF13180 PDZ domain Vc3S01_RS15250 PF03989 DNA gyrase C-terminal domain, beta-propeller Vc3S01_RS15250 PF00521 DNA gyrase/topoisomerase IV, subunit A Vc3S01_RS15255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS15255 PF00204 DNA gyrase B Vc3S01_RS15255 PF01751 Toprim domain Vc3S01_RS15255 PF00986 DNA gyrase B subunit, carboxyl terminus Vc3S01_RS15260 PF05728 Uncharacterised protein family (UPF0227) Vc3S01_RS15265 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS15270 PF06853 Protein of unknown function (DUF1249) Vc3S01_RS15275 PF00293 NUDIX domain Vc3S01_RS15280 PF02321 Outer membrane efflux protein Vc3S01_RS15285 PF00294 pfkB family carbohydrate kinase Vc3S01_RS15285 PF01467 Cytidylyltransferase-like Vc3S01_RS15290 PF03710 Glutamate-ammonia ligase adenylyltransferase Vc3S01_RS15290 PF08335 GlnD PII-uridylyltransferase Vc3S01_RS15295 PF02743 Cache domain Vc3S01_RS15295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS15295 PF00672 HAMP domain Vc3S01_RS15300 PF07885 Ion channel Vc3S01_RS15305 PF01928 CYTH domain Vc3S01_RS15310 PF01865 Protein of unknown function DUF47 Vc3S01_RS15315 PF01384 Phosphate transporter family Vc3S01_RS15320 PF08239 Bacterial SH3 domain Vc3S01_RS15335 PF13401 AAA domain Vc3S01_RS15335 PF01471 Putative peptidoglycan binding domain Vc3S01_RS15340 PF01966 HD domain Vc3S01_RS15340 PF01743 Poly A polymerase head domain Vc3S01_RS15340 PF12627 Probable RNA and SrmB- binding site of polymerase A Vc3S01_RS15345 PF02673 Bacitracin resistance protein BacA Vc3S01_RS15350 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Vc3S01_RS15355 PF02152 Dihydroneopterin aldolase Vc3S01_RS15360 PF02660 Glycerol-3-phosphate acyltransferase Vc3S01_RS15365 PF12697 Alpha/beta hydrolase family Vc3S01_RS15370 PF00814 Glycoprotease family Vc3S01_RS15375 PF01165 Ribosomal protein S21 Vc3S01_RS15380 PF09424 Yqey-like protein Vc3S01_RS15385 PF10410 DnaB-helicase binding domain of primase Vc3S01_RS15385 PF08278 DNA primase DnaG DnaB-binding Vc3S01_RS15385 PF08275 DNA primase catalytic core, N-terminal domain Vc3S01_RS15385 PF01807 CHC2 zinc finger Vc3S01_RS15390 PF04542 Sigma-70 region 2 Vc3S01_RS15390 PF00140 Sigma-70 factor, region 1.2 Vc3S01_RS15390 PF03979 Sigma-70 factor, region 1.1 Vc3S01_RS15390 PF04545 Sigma-70, region 4 Vc3S01_RS15390 PF04539 Sigma-70 region 3 Vc3S01_RS15390 PF04546 Sigma-70, non-essential region Vc3S01_RS15425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vc3S01_RS15425 PF02378 Phosphotransferase system, EIIC Vc3S01_RS15425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vc3S01_RS15430 PF01232 Mannitol dehydrogenase Rossmann domain Vc3S01_RS15430 PF08125 Mannitol dehydrogenase C-terminal domain Vc3S01_RS15435 PF05068 Mannitol repressor Vc3S01_RS15440 PF13419 Haloacid dehalogenase-like hydrolase Vc3S01_RS15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS15445 PF00672 HAMP domain Vc3S01_RS15445 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS15450 PF00072 Response regulator receiver domain Vc3S01_RS15450 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS15465 PF01380 SIS domain Vc3S01_RS15470 PF00455 DeoR C terminal sensor domain Vc3S01_RS15470 PF08220 DeoR-like helix-turn-helix domain Vc3S01_RS15475 PF02887 Pyruvate kinase, alpha/beta domain Vc3S01_RS15475 PF00224 Pyruvate kinase, barrel domain Vc3S01_RS15485 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS15485 PF17158 Membrane-associated sensor, integral membrane domain Vc3S01_RS15490 PF10369 Small subunit of acetolactate synthase Vc3S01_RS15495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vc3S01_RS15495 PF00205 Thiamine pyrophosphate enzyme, central domain Vc3S01_RS15495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vc3S01_RS15500 PF00501 AMP-binding enzyme Vc3S01_RS15505 PF03466 LysR substrate binding domain Vc3S01_RS15505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS15515 PF01569 PAP2 superfamily Vc3S01_RS15535 PF00682 HMGL-like Vc3S01_RS15535 PF08502 LeuA allosteric (dimerisation) domain Vc3S01_RS15540 PF00180 Isocitrate/isopropylmalate dehydrogenase Vc3S01_RS15545 PF00330 Aconitase family (aconitate hydratase) Vc3S01_RS15550 PF00694 Aconitase C-terminal domain Vc3S01_RS15560 PF05099 Tellurite resistance protein TerB Vc3S01_RS15560 PF00226 DnaJ domain Vc3S01_RS15565 PF03968 OstA-like protein Vc3S01_RS15565 PF04453 LPS transport system D Vc3S01_RS15570 PF09312 SurA N-terminal domain Vc3S01_RS15575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Vc3S01_RS15580 PF00398 Ribosomal RNA adenine dimethylase Vc3S01_RS15585 PF04379 ApaG domain Vc3S01_RS15590 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS15595 PF00186 Dihydrofolate reductase Vc3S01_RS15600 PF12821 Threonine/Serine exporter, ThrE Vc3S01_RS15605 PF06738 Putative threonine/serine exporter Vc3S01_RS15610 PF01926 50S ribosome-binding GTPase Vc3S01_RS15610 PF01018 GTP1/OBG Vc3S01_RS15615 PF01016 Ribosomal L27 protein Vc3S01_RS15620 PF00829 Ribosomal prokaryotic L21 protein Vc3S01_RS15625 PF00348 Polyprenyl synthetase Vc3S01_RS15635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Vc3S01_RS15635 PF00056 lactate/malate dehydrogenase, NAD binding domain Vc3S01_RS15640 PF02863 Arginine repressor, C-terminal domain Vc3S01_RS15640 PF01316 Arginine repressor, DNA binding domain Vc3S01_RS15645 PF16868 NMT1-like family Vc3S01_RS15660 PF00005 ABC transporter Vc3S01_RS15665 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS15675 PF02441 Flavoprotein Vc3S01_RS15680 PF01225 Mur ligase family, catalytic domain Vc3S01_RS15680 PF02875 Mur ligase family, glutamate ligase domain Vc3S01_RS15680 PF08245 Mur ligase middle domain Vc3S01_RS15685 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain Vc3S01_RS15690 PF00719 Inorganic pyrophosphatase Vc3S01_RS15705 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like Vc3S01_RS15710 PF04357 TamB, inner membrane protein subunit of TAM complex Vc3S01_RS15715 PF01103 Surface antigen Vc3S01_RS15715 PF07244 Surface antigen variable number repeat Vc3S01_RS15715 PF17243 POTRA domain TamA domain 1 Vc3S01_RS15720 PF01625 Peptide methionine sulfoxide reductase Vc3S01_RS15730 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) Vc3S01_RS15735 PF10795 Protein of unknown function (DUF2607) Vc3S01_RS15745 PF00005 ABC transporter Vc3S01_RS15770 PF03600 Citrate transporter Vc3S01_RS15770 PF02080 TrkA-C domain Vc3S01_RS15775 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS15780 PF01507 Phosphoadenosine phosphosulfate reductase family Vc3S01_RS15785 PF10414 Sirohaem synthase dimerisation region Vc3S01_RS15785 PF14824 Sirohaem biosynthesis protein central Vc3S01_RS15785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vc3S01_RS15790 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS15790 PF02872 5'-nucleotidase, C-terminal domain Vc3S01_RS15800 PF00271 Helicase conserved C-terminal domain Vc3S01_RS15800 PF03880 DbpA RNA binding domain Vc3S01_RS15800 PF00270 DEAD/DEAH box helicase Vc3S01_RS15805 PF13673 Acetyltransferase (GNAT) domain Vc3S01_RS15820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vc3S01_RS15820 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vc3S01_RS15830 PF01196 Ribosomal protein L17 Vc3S01_RS15835 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Vc3S01_RS15835 PF01000 RNA polymerase Rpb3/RpoA insert domain Vc3S01_RS15835 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Vc3S01_RS15840 PF00163 Ribosomal protein S4/S9 N-terminal domain Vc3S01_RS15840 PF01479 S4 domain Vc3S01_RS15845 PF00411 Ribosomal protein S11 Vc3S01_RS15850 PF00416 Ribosomal protein S13/S18 Vc3S01_RS15855 PF00444 Ribosomal protein L36 Vc3S01_RS15860 PF00344 SecY translocase Vc3S01_RS15865 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Vc3S01_RS15870 PF00327 Ribosomal protein L30p/L7e Vc3S01_RS15875 PF00333 Ribosomal protein S5, N-terminal domain Vc3S01_RS15875 PF03719 Ribosomal protein S5, C-terminal domain Vc3S01_RS15880 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Vc3S01_RS15885 PF00347 Ribosomal protein L6 Vc3S01_RS15890 PF00410 Ribosomal protein S8 Vc3S01_RS15895 PF00253 Ribosomal protein S14p/S29e Vc3S01_RS15900 PF00673 ribosomal L5P family C-terminus Vc3S01_RS15900 PF00281 Ribosomal protein L5 Vc3S01_RS15905 PF00467 KOW motif Vc3S01_RS15905 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Vc3S01_RS15910 PF00238 Ribosomal protein L14p/L23e Vc3S01_RS15915 PF00366 Ribosomal protein S17 Vc3S01_RS15920 PF00831 Ribosomal L29 protein Vc3S01_RS15925 PF00252 Ribosomal protein L16p/L10e Vc3S01_RS15930 PF07650 KH domain Vc3S01_RS15930 PF00189 Ribosomal protein S3, C-terminal domain Vc3S01_RS15935 PF00237 Ribosomal protein L22p/L17e Vc3S01_RS15940 PF00203 Ribosomal protein S19 Vc3S01_RS15945 PF03947 Ribosomal Proteins L2, C-terminal domain Vc3S01_RS15945 PF00181 Ribosomal Proteins L2, RNA binding domain Vc3S01_RS15950 PF00276 Ribosomal protein L23 Vc3S01_RS15955 PF00573 Ribosomal protein L4/L1 family Vc3S01_RS15960 PF00297 Ribosomal protein L3 Vc3S01_RS15965 PF00338 Ribosomal protein S10p/S20e Vc3S01_RS15970 PF01197 Ribosomal protein L31 Vc3S01_RS15975 PF00270 DEAD/DEAH box helicase Vc3S01_RS15975 PF00271 Helicase conserved C-terminal domain Vc3S01_RS15975 PF17764 3′ DNA-binding domain (3′BD) Vc3S01_RS15975 PF18074 Primosomal protein N C-terminal domain Vc3S01_RS15975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Vc3S01_RS15980 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS15990 PF00227 Proteasome subunit Vc3S01_RS15995 PF07724 AAA domain (Cdc48 subfamily) Vc3S01_RS15995 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS16000 PF01040 UbiA prenyltransferase family Vc3S01_RS16005 PF03737 Aldolase/RraA Vc3S01_RS16010 PF06005 Cell division protein ZapB Vc3S01_RS16015 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded Vc3S01_RS16020 PF00455 DeoR C terminal sensor domain Vc3S01_RS16020 PF08220 DeoR-like helix-turn-helix domain Vc3S01_RS16040 PF00121 Triosephosphate isomerase Vc3S01_RS16045 PF00483 Nucleotidyl transferase Vc3S01_RS16050 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Vc3S01_RS16050 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Vc3S01_RS16050 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Vc3S01_RS16060 PF00483 Nucleotidyl transferase Vc3S01_RS16075 PF00535 Glycosyl transferase family 2 Vc3S01_RS16080 PF00535 Glycosyl transferase family 2 Vc3S01_RS16100 PF00535 Glycosyl transferase family 2 Vc3S01_RS16105 PF00953 Glycosyl transferase family 4 Vc3S01_RS16110 PF10996 Beta-Casp domain Vc3S01_RS16110 PF00753 Metallo-beta-lactamase superfamily Vc3S01_RS16110 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Vc3S01_RS16115 PF02397 Bacterial sugar transferase Vc3S01_RS16120 PF00535 Glycosyl transferase family 2 Vc3S01_RS16125 PF00535 Glycosyl transferase family 2 Vc3S01_RS16140 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Vc3S01_RS16145 PF14667 Polysaccharide biosynthesis C-terminal domain Vc3S01_RS16145 PF01943 Polysaccharide biosynthesis protein Vc3S01_RS16150 PF00483 Nucleotidyl transferase Vc3S01_RS16155 PF16363 GDP-mannose 4,6 dehydratase Vc3S01_RS16175 PF02563 Polysaccharide biosynthesis/export protein Vc3S01_RS16175 PF10531 SLBB domain Vc3S01_RS16175 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Vc3S01_RS16190 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF Vc3S01_RS16200 PF06082 Exopolysaccharide biosynthesis protein YbjH Vc3S01_RS16205 PF01370 NAD dependent epimerase/dehydratase family Vc3S01_RS16210 PF03279 Bacterial lipid A biosynthesis acyltransferase Vc3S01_RS16215 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Vc3S01_RS16220 PF13439 Glycosyltransferase Family 4 Vc3S01_RS16220 PF00534 Glycosyl transferases group 1 Vc3S01_RS16225 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Vc3S01_RS16230 PF00535 Glycosyl transferase family 2 Vc3S01_RS16230 PF01501 Glycosyl transferase family 8 Vc3S01_RS16235 PF04230 Polysaccharide pyruvyl transferase Vc3S01_RS16245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) Vc3S01_RS16250 PF00535 Glycosyl transferase family 2 Vc3S01_RS16255 PF00534 Glycosyl transferases group 1 Vc3S01_RS16255 PF13439 Glycosyltransferase Family 4 Vc3S01_RS16260 PF01467 Cytidylyltransferase-like Vc3S01_RS16265 PF05686 Glycosyl transferase family 90 Vc3S01_RS16270 PF01219 Prokaryotic diacylglycerol kinase Vc3S01_RS16275 PF06827 Zinc finger found in FPG and IleRS Vc3S01_RS16275 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Vc3S01_RS16275 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Vc3S01_RS16285 PF00471 Ribosomal protein L33 Vc3S01_RS16290 PF00830 Ribosomal L28 family Vc3S01_RS16295 PF04002 RadC-like JAB domain Vc3S01_RS16300 PF00672 HAMP domain Vc3S01_RS16300 PF02743 Cache domain Vc3S01_RS16300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS16310 PF04127 DNA / pantothenate metabolism flavoprotein Vc3S01_RS16310 PF02441 Flavoprotein Vc3S01_RS16315 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS16320 PF03279 Bacterial lipid A biosynthesis acyltransferase Vc3S01_RS16325 PF00156 Phosphoribosyl transferase domain Vc3S01_RS16330 PF03725 3' exoribonuclease family, domain 2 Vc3S01_RS16330 PF01138 3' exoribonuclease family, domain 1 Vc3S01_RS16335 PF03755 YicC-like family, N-terminal region Vc3S01_RS16335 PF08340 Domain of unknown function (DUF1732) Vc3S01_RS16340 PF00892 EamA-like transporter family Vc3S01_RS16355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS16355 PF00005 ABC transporter Vc3S01_RS16360 PF00005 ABC transporter Vc3S01_RS16360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS16365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS16370 PF12911 N-terminal TM domain of oligopeptide transport permease C Vc3S01_RS16370 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS16375 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS16385 PF00593 TonB dependent receptor Vc3S01_RS16385 PF07715 TonB-dependent Receptor Plug Domain Vc3S01_RS16400 PF01618 MotA/TolQ/ExbB proton channel family Vc3S01_RS16405 PF02472 Biopolymer transport protein ExbD/TolR Vc3S01_RS16420 PF00625 Guanylate kinase Vc3S01_RS16425 PF01192 RNA polymerase Rpb6 Vc3S01_RS16430 PF04607 Region found in RelA / SpoT proteins Vc3S01_RS16430 PF13291 ACT domain Vc3S01_RS16430 PF02824 TGS domain Vc3S01_RS16435 PF12105 SpoU, rRNA methylase, C-terminal Vc3S01_RS16435 PF00588 SpoU rRNA Methylase family Vc3S01_RS16440 PF00270 DEAD/DEAH box helicase Vc3S01_RS16440 PF00271 Helicase conserved C-terminal domain Vc3S01_RS16440 PF17191 RecG wedge domain Vc3S01_RS16445 PF00326 Prolyl oligopeptidase family Vc3S01_RS16450 PF00860 Permease family Vc3S01_RS16455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS16455 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS16455 PF00672 HAMP domain Vc3S01_RS16460 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS16460 PF00072 Response regulator receiver domain Vc3S01_RS16465 PF03449 Transcription elongation factor, N-terminal Vc3S01_RS16465 PF01272 Transcription elongation factor, GreA/GreB, C-term Vc3S01_RS16475 PF16921 Tex protein YqgF-like domain Vc3S01_RS16475 PF09371 Tex-like protein N-terminal domain Vc3S01_RS16475 PF17674 HHH domain Vc3S01_RS16475 PF00575 S1 RNA binding domain Vc3S01_RS16485 PF00561 alpha/beta hydrolase fold Vc3S01_RS16490 PF00156 Phosphoribosyl transferase domain Vc3S01_RS16495 PF01106 NifU-like domain Vc3S01_RS16495 PF01521 Iron-sulphur cluster biosynthesis Vc3S01_RS16500 PF00293 NUDIX domain Vc3S01_RS16505 PF00459 Inositol monophosphatase family Vc3S01_RS16510 PF01203 Type II secretion system (T2SS), protein N Vc3S01_RS16515 PF04612 Type II secretion system (T2SS), protein M Vc3S01_RS16520 PF05134 Type II secretion system (T2SS), protein L Vc3S01_RS16520 PF12693 GspL periplasmic domain Vc3S01_RS16525 PF03934 Type II secretion system (T2SS), protein K Vc3S01_RS16530 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS16530 PF11612 Type II secretion system (T2SS), protein J Vc3S01_RS16535 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS16535 PF02501 Type II secretion system (T2SS), protein I Vc3S01_RS16540 PF12019 Type II transport protein GspH Vc3S01_RS16545 PF08334 Type II secretion system (T2SS), protein G Vc3S01_RS16545 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS16550 PF00482 Type II secretion system (T2SS), protein F Vc3S01_RS16555 PF00437 Type II/IV secretion system protein Vc3S01_RS16560 PF00263 Bacterial type II and III secretion system protein Vc3S01_RS16560 PF03958 Bacterial type II/III secretion system short domain Vc3S01_RS16565 PF11356 Type II secretion system protein C Vc3S01_RS16570 PF01479 S4 domain Vc3S01_RS16575 PF01430 Hsp33 protein Vc3S01_RS16580 PF01293 Phosphoenolpyruvate carboxykinase Vc3S01_RS16590 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS16590 PF09500 Putative thioesterase (yiiD_Cterm) Vc3S01_RS16595 PF02580 D-Tyr-tRNA(Tyr) deacylase Vc3S01_RS16600 PF03631 Virulence factor BrkB Vc3S01_RS16615 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS16615 PF03144 Elongation factor Tu domain 2 Vc3S01_RS16615 PF00679 Elongation factor G C-terminus Vc3S01_RS16625 PF03951 Glutamine synthetase, beta-Grasp domain Vc3S01_RS16625 PF00120 Glutamine synthetase, catalytic domain Vc3S01_RS16635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS16635 PF00989 PAS fold Vc3S01_RS16635 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS16640 PF00072 Response regulator receiver domain Vc3S01_RS16640 PF00158 Sigma-54 interaction domain Vc3S01_RS16640 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS16645 PF13188 PAS domain Vc3S01_RS16645 PF00563 EAL domain Vc3S01_RS16645 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS16645 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS16650 PF00962 Adenosine/AMP deaminase Vc3S01_RS16655 PF06969 HemN C-terminal domain Vc3S01_RS16655 PF04055 Radical SAM superfamily Vc3S01_RS16660 PF10675 Protein of unknown function (DUF2489) Vc3S01_RS16665 PF04220 Der GTPase activator (YihI) Vc3S01_RS16675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vc3S01_RS16680 PF01926 50S ribosome-binding GTPase Vc3S01_RS16690 PF01367 5'-3' exonuclease, C-terminal SAM fold Vc3S01_RS16690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Vc3S01_RS16690 PF01612 3'-5' exonuclease Vc3S01_RS16690 PF00476 DNA polymerase family A Vc3S01_RS16705 PF00490 Delta-aminolevulinic acid dehydratase Vc3S01_RS16715 PF01026 TatD related DNase Vc3S01_RS16730 PF00902 Sec-independent protein translocase protein (TatC) Vc3S01_RS16735 PF02416 mttA/Hcf106 family Vc3S01_RS16740 PF02416 mttA/Hcf106 family Vc3S01_RS16745 PF03109 ABC1 family Vc3S01_RS16750 PF02036 SCP-2 sterol transfer family Vc3S01_RS16755 PF01209 ubiE/COQ5 methyltransferase family Vc3S01_RS16760 PF02646 RmuC family Vc3S01_RS16770 PF00563 EAL domain Vc3S01_RS16770 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS16770 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS16775 PF12727 PBP superfamily domain Vc3S01_RS16775 PF12728 Helix-turn-helix domain Vc3S01_RS16785 PF04545 Sigma-70, region 4 Vc3S01_RS16785 PF04542 Sigma-70 region 2 Vc3S01_RS16800 PF10625 Universal stress protein B (UspB) Vc3S01_RS16805 PF00210 Ferritin-like domain Vc3S01_RS16810 PF00582 Universal stress protein family Vc3S01_RS16815 PF00892 EamA-like transporter family Vc3S01_RS16825 PF04445 Putative SAM-dependent methyltransferase Vc3S01_RS16830 PF00563 EAL domain Vc3S01_RS16830 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS16830 PF08448 PAS fold Vc3S01_RS16835 PF01037 Lrp/AsnC ligand binding domain Vc3S01_RS16840 PF01432 Peptidase family M3 Vc3S01_RS16850 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Vc3S01_RS16860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vc3S01_RS16860 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS16905 PF07804 HipA-like C-terminal domain Vc3S01_RS16905 PF13657 HipA N-terminal domain Vc3S01_RS16915 PF01381 Helix-turn-helix Vc3S01_RS16920 PF04245 37-kD nucleoid-associated bacterial protein Vc3S01_RS16945 PF01081 KDPG and KHG aldolase Vc3S01_RS16950 PF02447 GntP family permease Vc3S01_RS16955 PF01202 Shikimate kinase Vc3S01_RS16960 PF00920 Dehydratase family Vc3S01_RS16965 PF00893 Small Multidrug Resistance protein Vc3S01_RS16970 PF00893 Small Multidrug Resistance protein Vc3S01_RS16975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS16975 PF03466 LysR substrate binding domain Vc3S01_RS16980 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vc3S01_RS16980 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS16985 PF00069 Protein kinase domain Vc3S01_RS17015 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS17015 PF12911 N-terminal TM domain of oligopeptide transport permease C Vc3S01_RS17020 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS17025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS17030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS17030 PF00005 ABC transporter Vc3S01_RS17040 PF13419 Haloacid dehalogenase-like hydrolase Vc3S01_RS17070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vc3S01_RS17075 PF13361 UvrD-like helicase C-terminal domain Vc3S01_RS17075 PF00580 UvrD/REP helicase N-terminal domain Vc3S01_RS17080 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS17080 PF08359 YsiA-like protein, C-terminal region Vc3S01_RS17085 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS17090 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS17100 PF04380 Membrane fusogenic activity Vc3S01_RS17110 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Vc3S01_RS17110 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Vc3S01_RS17115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS17115 PF03466 LysR substrate binding domain Vc3S01_RS17165 PF00132 Bacterial transferase hexapeptide (six repeats) Vc3S01_RS17175 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Vc3S01_RS17175 PF08501 Shikimate dehydrogenase substrate binding domain Vc3S01_RS17175 PF01488 Shikimate / quinate 5-dehydrogenase Vc3S01_RS17180 PF01218 Coproporphyrinogen III oxidase Vc3S01_RS17185 PF01300 Telomere recombination Vc3S01_RS17190 PF00731 AIR carboxylase Vc3S01_RS17195 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Vc3S01_RS17195 PF02222 ATP-grasp domain Vc3S01_RS17200 PF01396 Topoisomerase DNA binding C4 zinc finger Vc3S01_RS17205 PF04361 Protein of unknown function (DUF494) Vc3S01_RS17210 PF02481 DNA recombination-mediator protein A Vc3S01_RS17210 PF17782 DprA winged helix domain Vc3S01_RS17220 PF01327 Polypeptide deformylase Vc3S01_RS17225 PF02911 Formyl transferase, C-terminal domain Vc3S01_RS17225 PF00551 Formyl transferase Vc3S01_RS17230 PF01029 NusB family Vc3S01_RS17230 PF01189 16S rRNA methyltransferase RsmB/F Vc3S01_RS17235 PF02254 TrkA-N domain Vc3S01_RS17235 PF02080 TrkA-C domain Vc3S01_RS17240 PF02386 Cation transport protein Vc3S01_RS17250 PF03006 Haemolysin-III related Vc3S01_RS17255 PF07070 SpoOM protein Vc3S01_RS17265 PF06288 Protein of unknown function (DUF1040) Vc3S01_RS17270 PF12801 4Fe-4S binding domain Vc3S01_RS17270 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase Vc3S01_RS17270 PF13746 4Fe-4S dicluster domain Vc3S01_RS17275 PF01636 Phosphotransferase enzyme family Vc3S01_RS17280 PF01323 DSBA-like thioredoxin domain Vc3S01_RS17285 PF01553 Acyltransferase Vc3S01_RS17295 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS17295 PF17152 Periplasmic sensor domain Vc3S01_RS17300 PF01078 Magnesium chelatase, subunit ChlI Vc3S01_RS17300 PF13335 Magnesium chelatase, subunit ChlI C-terminal Vc3S01_RS17305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vc3S01_RS17305 PF00205 Thiamine pyrophosphate enzyme, central domain Vc3S01_RS17305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vc3S01_RS17315 PF01063 Amino-transferase class IV Vc3S01_RS17320 PF00920 Dehydratase family Vc3S01_RS17325 PF00291 Pyridoxal-phosphate dependent enzyme Vc3S01_RS17325 PF00585 C-terminal regulatory domain of Threonine dehydratase Vc3S01_RS17330 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS17335 PF03466 LysR substrate binding domain Vc3S01_RS17335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS17340 PF07690 Major Facilitator Superfamily Vc3S01_RS17345 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS17350 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS17355 PF00132 Bacterial transferase hexapeptide (six repeats) Vc3S01_RS17355 PF12804 MobA-like NTP transferase domain Vc3S01_RS17360 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Vc3S01_RS17360 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Vc3S01_RS17365 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vc3S01_RS17365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vc3S01_RS17370 PF00231 ATP synthase Vc3S01_RS17375 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vc3S01_RS17375 PF00306 ATP synthase alpha/beta chain, C terminal domain Vc3S01_RS17375 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vc3S01_RS17380 PF00213 ATP synthase delta (OSCP) subunit Vc3S01_RS17385 PF00430 ATP synthase B/B' CF(0) Vc3S01_RS17390 PF00137 ATP synthase subunit C Vc3S01_RS17395 PF00119 ATP synthase A chain Vc3S01_RS17400 PF03899 ATP synthase I chain Vc3S01_RS17405 PF02195 ParB-like nuclease domain Vc3S01_RS17405 PF17762 HTH domain found in ParB protein Vc3S01_RS17410 PF13614 AAA domain Vc3S01_RS17415 PF02527 rRNA small subunit methyltransferase G Vc3S01_RS17420 PF13932 GidA associated domain Vc3S01_RS17420 PF01134 Glucose inhibited division protein A Vc3S01_RS17425 PF18607 ParA helix turn helix domain Vc3S01_RS17425 PF13614 AAA domain Vc3S01_RS17440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS17440 PF00005 ABC transporter Vc3S01_RS17445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS17445 PF00005 ABC transporter Vc3S01_RS17455 PF08719 Domain of unknown function (DUF1768) Vc3S01_RS17455 PF00925 GTP cyclohydrolase II Vc3S01_RS17465 PF00672 HAMP domain Vc3S01_RS17465 PF17149 Periplasmic sensor domain found in signal transduction proteins Vc3S01_RS17465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS17465 PF01627 Hpt domain Vc3S01_RS17465 PF00072 Response regulator receiver domain Vc3S01_RS17465 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS17475 PF01709 Transcriptional regulator Vc3S01_RS17480 PF01098 Cell cycle protein Vc3S01_RS17495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS17500 PF03466 LysR substrate binding domain Vc3S01_RS17500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS17510 PF00005 ABC transporter Vc3S01_RS17530 PF13492 GAF domain Vc3S01_RS17530 PF07694 5TMR of 5TMR-LYT Vc3S01_RS17530 PF06580 Histidine kinase Vc3S01_RS17530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS17535 PF00072 Response regulator receiver domain Vc3S01_RS17535 PF04397 LytTr DNA-binding domain Vc3S01_RS17545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Vc3S01_RS17550 PF17200 Single Cache domain 2 Vc3S01_RS17550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS17550 PF00672 HAMP domain Vc3S01_RS17565 PF03616 Sodium/glutamate symporter Vc3S01_RS17585 PF01593 Flavin containing amine oxidoreductase Vc3S01_RS17605 PF00005 ABC transporter Vc3S01_RS17610 PF00155 Aminotransferase class I and II Vc3S01_RS17610 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS17615 PF03616 Sodium/glutamate symporter Vc3S01_RS17635 PF12833 Helix-turn-helix domain Vc3S01_RS17640 PF02386 Cation transport protein Vc3S01_RS17650 PF12833 Helix-turn-helix domain Vc3S01_RS17655 PF01774 UreD urease accessory protein Vc3S01_RS17660 PF00547 Urease, gamma subunit Vc3S01_RS17665 PF00699 Urease beta subunit Vc3S01_RS17670 PF01979 Amidohydrolase family Vc3S01_RS17670 PF00449 Urease alpha-subunit, N-terminal domain Vc3S01_RS17675 PF05194 UreE urease accessory protein, C-terminal domain Vc3S01_RS17675 PF02814 UreE urease accessory protein, N-terminal domain Vc3S01_RS17680 PF01730 UreF Vc3S01_RS17685 PF02492 CobW/HypB/UreG, nucleotide-binding domain Vc3S01_RS17695 PF12833 Helix-turn-helix domain Vc3S01_RS17700 PF00005 ABC transporter Vc3S01_RS17710 PF01032 FecCD transport family Vc3S01_RS17720 PF01740 STAS domain Vc3S01_RS17720 PF00916 Sulfate permease family Vc3S01_RS17735 PF01042 Endoribonuclease L-PSP Vc3S01_RS17740 PF14760 Rnk N-terminus Vc3S01_RS17740 PF01272 Transcription elongation factor, GreA/GreB, C-term Vc3S01_RS17745 PF12833 Helix-turn-helix domain Vc3S01_RS17750 PF02492 CobW/HypB/UreG, nucleotide-binding domain Vc3S01_RS17760 PF00194 Eukaryotic-type carbonic anhydrase Vc3S01_RS17775 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Vc3S01_RS17790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS17790 PF03466 LysR substrate binding domain Vc3S01_RS17795 PF07681 DoxX Vc3S01_RS17805 PF00730 HhH-GPD superfamily base excision DNA repair protein Vc3S01_RS17805 PF06029 AlkA N-terminal domain Vc3S01_RS17810 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Vc3S01_RS17810 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Vc3S01_RS17820 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 Vc3S01_RS17830 PF03600 Citrate transporter Vc3S01_RS17850 PF00704 Glycosyl hydrolases family 18 Vc3S01_RS17850 PF08329 Chitinase A, N-terminal domain Vc3S01_RS17860 PF06865 Pyrimidine/purine nucleoside phosphorylase Vc3S01_RS17870 PF00563 EAL domain Vc3S01_RS17870 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS17880 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS17890 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS17895 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS17900 PF00232 Glycosyl hydrolase family 1 Vc3S01_RS17905 PF00005 ABC transporter Vc3S01_RS17905 PF17912 MalK OB fold domain Vc3S01_RS17910 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS17920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS17925 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS17930 PF12911 N-terminal TM domain of oligopeptide transport permease C Vc3S01_RS17930 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS17935 PF00005 ABC transporter Vc3S01_RS17935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS17940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS17940 PF00005 ABC transporter Vc3S01_RS17950 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS17955 PF00722 Glycosyl hydrolases family 16 Vc3S01_RS17970 PF12833 Helix-turn-helix domain Vc3S01_RS17975 PF01915 Glycosyl hydrolase family 3 C-terminal domain Vc3S01_RS17975 PF00933 Glycosyl hydrolase family 3 N terminal domain Vc3S01_RS17975 PF14310 Fibronectin type III-like domain Vc3S01_RS17980 PF01554 MatE Vc3S01_RS17985 PF00849 RNA pseudouridylate synthase Vc3S01_RS18000 PF00563 EAL domain Vc3S01_RS18000 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS18000 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS18010 PF05656 Protein of unknown function (DUF805) Vc3S01_RS18020 PF00756 Putative esterase Vc3S01_RS18025 PF00107 Zinc-binding dehydrogenase Vc3S01_RS18025 PF08240 Alcohol dehydrogenase GroES-like domain Vc3S01_RS18030 PF00797 N-acetyltransferase Vc3S01_RS18045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS18045 PF03466 LysR substrate binding domain Vc3S01_RS18075 PF00326 Prolyl oligopeptidase family Vc3S01_RS18080 PF01810 LysE type translocator Vc3S01_RS18085 PF01037 Lrp/AsnC ligand binding domain Vc3S01_RS18090 PF18416 N-acetylglucosamine binding protein domain 2 Vc3S01_RS18090 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading Vc3S01_RS18100 PF00893 Small Multidrug Resistance protein Vc3S01_RS18110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS18110 PF03466 LysR substrate binding domain Vc3S01_RS18115 PF01554 MatE Vc3S01_RS18130 PF13599 Pentapeptide repeats (9 copies) Vc3S01_RS18135 PF03922 OmpW family Vc3S01_RS18140 PF13533 Biotin-lipoyl like Vc3S01_RS18145 PF07690 Major Facilitator Superfamily Vc3S01_RS18155 PF12706 Beta-lactamase superfamily domain Vc3S01_RS18165 PF01204 Trehalase Vc3S01_RS18180 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS18185 PF03974 Ecotin Vc3S01_RS18200 PF01593 Flavin containing amine oxidoreductase Vc3S01_RS18200 PF02027 RolB/RolC glucosidase family Vc3S01_RS18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS18220 PF03466 LysR substrate binding domain Vc3S01_RS18255 PF17853 GGDEF-like domain Vc3S01_RS18255 PF13556 PucR C-terminal helix-turn-helix domain Vc3S01_RS18255 PF05651 Putative sugar diacid recognition Vc3S01_RS18260 PF02595 Glycerate kinase family Vc3S01_RS18265 PF00155 Aminotransferase class I and II Vc3S01_RS18265 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS18305 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS18335 PF03264 NapC/NirT cytochrome c family, N-terminal region Vc3S01_RS18340 PF01568 Molydopterin dinucleotide binding domain Vc3S01_RS18340 PF18364 Molybdopterin oxidoreductase N-terminal domain Vc3S01_RS18340 PF00384 Molybdopterin oxidoreductase Vc3S01_RS18345 PF01569 PAP2 superfamily Vc3S01_RS18350 PF02581 Thiamine monophosphate synthase Vc3S01_RS18355 PF02110 Hydroxyethylthiazole kinase family Vc3S01_RS18360 PF03070 TENA/THI-4/PQQC family Vc3S01_RS18365 PF09084 NMT1/THI5 like Vc3S01_RS18370 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS18375 PF00005 ABC transporter Vc3S01_RS18380 PF08543 Phosphomethylpyrimidine kinase Vc3S01_RS18385 PF01523 Putative modulator of DNA gyrase Vc3S01_RS18390 PF01523 Putative modulator of DNA gyrase Vc3S01_RS18395 PF04013 Putative SAM-dependent RNA methyltransferase Vc3S01_RS18460 PF10928 Protein of unknown function (DUF2810) Vc3S01_RS18465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Vc3S01_RS18465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Vc3S01_RS18475 PF03009 Glycerophosphoryl diester phosphodiesterase family Vc3S01_RS18480 PF00072 Response regulator receiver domain Vc3S01_RS18480 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS18485 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS18485 PF16750 Sensor domain of 2-component histidine kinase Vc3S01_RS18485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS18485 PF00672 HAMP domain Vc3S01_RS18490 PF07715 TonB-dependent Receptor Plug Domain Vc3S01_RS18490 PF00593 TonB dependent receptor Vc3S01_RS18500 PF01618 MotA/TolQ/ExbB proton channel family Vc3S01_RS18505 PF01618 MotA/TolQ/ExbB proton channel family Vc3S01_RS18510 PF02472 Biopolymer transport protein ExbD/TolR Vc3S01_RS18555 PF01297 Zinc-uptake complex component A periplasmic Vc3S01_RS18560 PF00005 ABC transporter Vc3S01_RS18565 PF00950 ABC 3 transport family Vc3S01_RS18580 PF00326 Prolyl oligopeptidase family Vc3S01_RS18580 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vc3S01_RS18585 PF07690 Major Facilitator Superfamily Vc3S01_RS18590 PF00491 Arginase family Vc3S01_RS18595 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Vc3S01_RS18595 PF17810 Arginine decarboxylase helical bundle domain Vc3S01_RS18595 PF17944 Arginine decarboxylase C-terminal helical extension Vc3S01_RS18605 PF18030 RimK PreATP-grasp domain Vc3S01_RS18605 PF08443 RimK-like ATP-grasp domain Vc3S01_RS18610 PF08443 RimK-like ATP-grasp domain Vc3S01_RS18610 PF18030 RimK PreATP-grasp domain Vc3S01_RS18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS18620 PF03466 LysR substrate binding domain Vc3S01_RS18645 PF00232 Glycosyl hydrolase family 1 Vc3S01_RS18655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS18655 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS18655 PF00072 Response regulator receiver domain Vc3S01_RS18655 PF13426 PAS domain Vc3S01_RS18655 PF08448 PAS fold Vc3S01_RS18660 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS18660 PF00158 Sigma-54 interaction domain Vc3S01_RS18660 PF00072 Response regulator receiver domain Vc3S01_RS18665 PF05525 Branched-chain amino acid transport protein Vc3S01_RS18680 PF01266 FAD dependent oxidoreductase Vc3S01_RS18685 PF04229 GrpB protein Vc3S01_RS18695 PF03116 NQR2, RnfD, RnfE family Vc3S01_RS18700 PF01212 Beta-eliminating lyase Vc3S01_RS18720 PF07670 Nucleoside recognition Vc3S01_RS18720 PF01773 Na+ dependent nucleoside transporter N-terminus Vc3S01_RS18720 PF07662 Na+ dependent nucleoside transporter C-terminus Vc3S01_RS18725 PF00483 Nucleotidyl transferase Vc3S01_RS18745 PF00563 EAL domain Vc3S01_RS18745 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS18745 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS18760 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS18765 PF00875 DNA photolyase Vc3S01_RS18765 PF03441 FAD binding domain of DNA photolyase Vc3S01_RS18770 PF04244 Deoxyribodipyrimidine photo-lyase-related protein Vc3S01_RS18785 PF01625 Peptide methionine sulfoxide reductase Vc3S01_RS18785 PF01641 SelR domain Vc3S01_RS18790 PF02566 OsmC-like protein Vc3S01_RS18795 PF14602 Hexapeptide repeat of succinyl-transferase Vc3S01_RS18795 PF12464 Maltose acetyltransferase Vc3S01_RS18820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS18820 PF03466 LysR substrate binding domain Vc3S01_RS18825 PF13419 Haloacid dehalogenase-like hydrolase Vc3S01_RS18850 PF00657 GDSL-like Lipase/Acylhydrolase Vc3S01_RS18855 PF00082 Subtilase family Vc3S01_RS18855 PF05922 Peptidase inhibitor I9 Vc3S01_RS18865 PF13419 Haloacid dehalogenase-like hydrolase Vc3S01_RS18870 PF00202 Aminotransferase class-III Vc3S01_RS18875 PF00266 Aminotransferase class-V Vc3S01_RS18885 PF00005 ABC transporter Vc3S01_RS18890 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS18895 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS18895 PF07702 UTRA domain Vc3S01_RS18910 PF04393 Protein of unknown function (DUF535) Vc3S01_RS18920 PF01266 FAD dependent oxidoreductase Vc3S01_RS18925 PF00246 Zinc carboxypeptidase Vc3S01_RS18925 PF18027 Cytosolic carboxypeptidase N-terminal domain Vc3S01_RS18930 PF00691 OmpA family Vc3S01_RS18930 PF01389 OmpA-like transmembrane domain Vc3S01_RS18935 PF03466 LysR substrate binding domain Vc3S01_RS18935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS18945 PF03466 LysR substrate binding domain Vc3S01_RS18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS18955 PF01566 Natural resistance-associated macrophage protein Vc3S01_RS18960 PF00854 POT family Vc3S01_RS18965 PF03313 Serine dehydratase alpha chain Vc3S01_RS18965 PF03315 Serine dehydratase beta chain Vc3S01_RS18990 PF01464 Transglycosylase SLT domain Vc3S01_RS18990 PF01476 LysM domain Vc3S01_RS19010 PF00460 Flagella basal body rod protein Vc3S01_RS19015 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS19015 PF00460 Flagella basal body rod protein Vc3S01_RS19020 PF13861 FlgD Tudor-like domain Vc3S01_RS19020 PF03963 Flagellar hook capping protein - N-terminal region Vc3S01_RS19020 PF13860 FlgD Ig-like domain Vc3S01_RS19025 PF07559 Flagellar basal body protein FlaE Vc3S01_RS19025 PF00460 Flagella basal body rod protein Vc3S01_RS19025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS19030 PF00460 Flagella basal body rod protein Vc3S01_RS19030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS19035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS19035 PF00460 Flagella basal body rod protein Vc3S01_RS19040 PF02107 Flagellar L-ring protein Vc3S01_RS19045 PF02119 Flagellar P-ring protein Vc3S01_RS19050 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase Vc3S01_RS19050 PF10135 Rod binding protein Vc3S01_RS19055 PF00460 Flagella basal body rod protein Vc3S01_RS19055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal Vc3S01_RS19060 PF00700 Bacterial flagellin C-terminal helical region Vc3S01_RS19060 PF00669 Bacterial flagellin N-terminal helical region Vc3S01_RS19080 PF01070 FMN-dependent dehydrogenase Vc3S01_RS19110 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS19120 PF08000 Bacterial PH domain Vc3S01_RS19125 PF02567 Phenazine biosynthesis-like protein Vc3S01_RS19150 PF00691 OmpA family Vc3S01_RS19150 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vc3S01_RS19155 PF01618 MotA/TolQ/ExbB proton channel family Vc3S01_RS19160 PF04542 Sigma-70 region 2 Vc3S01_RS19160 PF04545 Sigma-70, region 4 Vc3S01_RS19165 PF03748 Flagellar basal body-associated protein FliL Vc3S01_RS19180 PF02561 Flagellar protein FliS Vc3S01_RS19185 PF02465 Flagellar hook-associated protein 2 N-terminus Vc3S01_RS19185 PF07196 Flagellin hook IN motif Vc3S01_RS19185 PF07195 Flagellar hook-associated protein 2 C-terminus Vc3S01_RS19195 PF00669 Bacterial flagellin N-terminal helical region Vc3S01_RS19195 PF00700 Bacterial flagellin C-terminal helical region Vc3S01_RS19205 PF00771 FHIPEP family Vc3S01_RS19210 PF01312 FlhB HrpN YscU SpaS Family Vc3S01_RS19215 PF01311 Bacterial export proteins, family 1 Vc3S01_RS19220 PF01313 Bacterial export proteins, family 3 Vc3S01_RS19225 PF00813 FliP family Vc3S01_RS19230 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term Vc3S01_RS19245 PF00158 Sigma-54 interaction domain Vc3S01_RS19245 PF00072 Response regulator receiver domain Vc3S01_RS19245 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS19250 PF02049 Flagellar hook-basal body complex protein FliE Vc3S01_RS19255 PF08345 Flagellar M-ring protein C-terminal Vc3S01_RS19255 PF01514 Secretory protein of YscJ/FliF family Vc3S01_RS19260 PF14842 FliG N-terminal domain Vc3S01_RS19260 PF01706 FliG C-terminal domain Vc3S01_RS19260 PF14841 FliG middle domain Vc3S01_RS19270 PF18269 T3SS EscN ATPase C-terminal domain Vc3S01_RS19270 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vc3S01_RS19280 PF00563 EAL domain Vc3S01_RS19280 PF05231 MASE1 Vc3S01_RS19290 PF03466 LysR substrate binding domain Vc3S01_RS19290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS19300 PF00419 Fimbrial protein Vc3S01_RS19305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Vc3S01_RS19305 PF02753 Pili assembly chaperone PapD, C-terminal domain Vc3S01_RS19310 PF00577 Outer membrane usher protein Vc3S01_RS19310 PF13953 PapC C-terminal domain Vc3S01_RS19310 PF13954 PapC N-terminal domain Vc3S01_RS19320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Vc3S01_RS19320 PF02753 Pili assembly chaperone PapD, C-terminal domain Vc3S01_RS19355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS19355 PF03466 LysR substrate binding domain Vc3S01_RS19370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS19375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS19375 PF03466 LysR substrate binding domain Vc3S01_RS19395 PF00072 Response regulator receiver domain Vc3S01_RS19395 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS19400 PF00072 Response regulator receiver domain Vc3S01_RS19400 PF13426 PAS domain Vc3S01_RS19400 PF08448 PAS fold Vc3S01_RS19400 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS19400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS19405 PF00266 Aminotransferase class-V Vc3S01_RS19415 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS19415 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS19415 PF00563 EAL domain Vc3S01_RS19420 PF00155 Aminotransferase class I and II Vc3S01_RS19425 PF08240 Alcohol dehydrogenase GroES-like domain Vc3S01_RS19425 PF00107 Zinc-binding dehydrogenase Vc3S01_RS19435 PF14031 Putative serine dehydratase domain Vc3S01_RS19435 PF01168 Alanine racemase, N-terminal domain Vc3S01_RS19450 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS19455 PF07690 Major Facilitator Superfamily Vc3S01_RS19460 PF08240 Alcohol dehydrogenase GroES-like domain Vc3S01_RS19460 PF00107 Zinc-binding dehydrogenase Vc3S01_RS19465 PF00194 Eukaryotic-type carbonic anhydrase Vc3S01_RS19470 PF00924 Mechanosensitive ion channel Vc3S01_RS19480 PF01070 FMN-dependent dehydrogenase Vc3S01_RS19485 PF02652 L-lactate permease Vc3S01_RS19490 PF03466 LysR substrate binding domain Vc3S01_RS19490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS19495 PF00326 Prolyl oligopeptidase family Vc3S01_RS19495 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vc3S01_RS19500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Vc3S01_RS19500 PF00005 ABC transporter Vc3S01_RS19510 PF05362 Lon protease (S16) C-terminal proteolytic domain Vc3S01_RS19510 PF13654 AAA domain Vc3S01_RS19515 PF00672 HAMP domain Vc3S01_RS19515 PF12729 Four helix bundle sensory module for signal transduction Vc3S01_RS19515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS19520 PF13609 Gram-negative porin Vc3S01_RS19525 PF12945 Flagellar protein YcgR Vc3S01_RS19525 PF07238 PilZ domain Vc3S01_RS19540 PF13302 Acetyltransferase (GNAT) domain Vc3S01_RS19545 PF12800 4Fe-4S binding domain Vc3S01_RS19545 PF12838 4Fe-4S dicluster domain Vc3S01_RS19550 PF12837 4Fe-4S binding domain Vc3S01_RS19550 PF12801 4Fe-4S binding domain Vc3S01_RS19560 PF01022 Bacterial regulatory protein, arsR family Vc3S01_RS19575 PF00005 ABC transporter Vc3S01_RS19575 PF12558 ATP-binding cassette cobalt transporter Vc3S01_RS19580 PF07155 ECF-type riboflavin transporter, S component Vc3S01_RS19585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS19585 PF00529 HlyD membrane-fusion protein of T1SS Vc3S01_RS19590 PF11742 Protein of unknown function (DUF3302) Vc3S01_RS19600 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS19615 PF01048 Phosphorylase superfamily Vc3S01_RS19620 PF08349 Protein of unknown function (DUF1722) Vc3S01_RS19625 PF13411 MerR HTH family regulatory protein Vc3S01_RS19630 PF00875 DNA photolyase Vc3S01_RS19630 PF03441 FAD binding domain of DNA photolyase Vc3S01_RS19635 PF03734 L,D-transpeptidase catalytic domain Vc3S01_RS19635 PF01476 LysM domain Vc3S01_RS19635 PF17969 L,D-transpeptidase C-terminal domain Vc3S01_RS19645 PF00270 DEAD/DEAH box helicase Vc3S01_RS19645 PF00271 Helicase conserved C-terminal domain Vc3S01_RS19650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vc3S01_RS19650 PF00326 Prolyl oligopeptidase family Vc3S01_RS19655 PF00593 TonB dependent receptor Vc3S01_RS19655 PF07715 TonB-dependent Receptor Plug Domain Vc3S01_RS19675 PF00672 HAMP domain Vc3S01_RS19675 PF02743 Cache domain Vc3S01_RS19675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS19680 PF12849 PBP superfamily domain Vc3S01_RS19685 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS19690 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS19695 PF00005 ABC transporter Vc3S01_RS19710 PF13519 von Willebrand factor type A domain Vc3S01_RS19715 PF13519 von Willebrand factor type A domain Vc3S01_RS19725 PF01882 Protein of unknown function DUF58 Vc3S01_RS19730 PF17863 AAA lid domain Vc3S01_RS19730 PF07726 ATPase family associated with various cellular activities (AAA) Vc3S01_RS19750 PF02743 Cache domain Vc3S01_RS19750 PF00672 HAMP domain Vc3S01_RS19750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS19760 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS19765 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS19775 PF00664 ABC transporter transmembrane region Vc3S01_RS19775 PF00005 ABC transporter Vc3S01_RS19780 PF00529 HlyD membrane-fusion protein of T1SS Vc3S01_RS19785 PF14602 Hexapeptide repeat of succinyl-transferase Vc3S01_RS19785 PF12464 Maltose acetyltransferase Vc3S01_RS19790 PF00072 Response regulator receiver domain Vc3S01_RS19790 PF01966 HD domain Vc3S01_RS19795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS19795 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS19815 PF00691 OmpA family Vc3S01_RS19815 PF01389 OmpA-like transmembrane domain Vc3S01_RS19835 PF00691 OmpA family Vc3S01_RS19845 PF00563 EAL domain Vc3S01_RS19845 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS19845 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS19850 PF02378 Phosphotransferase system, EIIC Vc3S01_RS19855 PF00127 Copper binding proteins, plastocyanin/azurin family Vc3S01_RS19865 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS19870 PF00375 Sodium:dicarboxylate symporter family Vc3S01_RS19875 PF13419 Haloacid dehalogenase-like hydrolase Vc3S01_RS19880 PF00158 Sigma-54 interaction domain Vc3S01_RS19880 PF01590 GAF domain Vc3S01_RS19885 PF00753 Metallo-beta-lactamase superfamily Vc3S01_RS19885 PF00258 Flavodoxin Vc3S01_RS19885 PF00301 Rubredoxin Vc3S01_RS19890 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS19890 PF18113 Rubredoxin binding C-terminal domain Vc3S01_RS19905 PF00892 EamA-like transporter family Vc3S01_RS19915 PF01238 Phosphomannose isomerase type I Vc3S01_RS19920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vc3S01_RS19920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vc3S01_RS19925 PF12833 Helix-turn-helix domain Vc3S01_RS19935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vc3S01_RS19945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS19945 PF03466 LysR substrate binding domain Vc3S01_RS19955 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vc3S01_RS19955 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vc3S01_RS19960 PF00199 Catalase Vc3S01_RS19960 PF06628 Catalase-related immune-responsive Vc3S01_RS19970 PF00107 Zinc-binding dehydrogenase Vc3S01_RS19970 PF16884 N-terminal domain of oxidoreductase Vc3S01_RS19975 PF16925 Tetracyclin repressor-like, C-terminal domain Vc3S01_RS19975 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS19980 PF04266 ASCH domain Vc3S01_RS20010 PF00534 Glycosyl transferases group 1 Vc3S01_RS20010 PF13439 Glycosyltransferase Family 4 Vc3S01_RS20020 PF13614 AAA domain Vc3S01_RS20020 PF13807 G-rich domain on putative tyrosine kinase Vc3S01_RS20020 PF02706 Chain length determinant protein Vc3S01_RS20035 PF02397 Bacterial sugar transferase Vc3S01_RS20040 PF12792 CSS motif domain associated with EAL Vc3S01_RS20040 PF00563 EAL domain Vc3S01_RS20050 PF08402 TOBE domain Vc3S01_RS20050 PF00005 ABC transporter Vc3S01_RS20060 PF01547 Bacterial extracellular solute-binding protein Vc3S01_RS20065 PF14785 Maltose transport system permease protein MalF P2 domain Vc3S01_RS20065 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS20070 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS20100 PF05661 Protein of unknown function (DUF808) Vc3S01_RS20105 PF01979 Amidohydrolase family Vc3S01_RS20115 PF01679 Proteolipid membrane potential modulator Vc3S01_RS20120 PF03473 MOSC domain Vc3S01_RS20120 PF00111 2Fe-2S iron-sulfur cluster binding domain Vc3S01_RS20120 PF03476 MOSC N-terminal beta barrel domain Vc3S01_RS20120 PF03473 MOSC domain Vc3S01_RS20120 PF00111 2Fe-2S iron-sulfur cluster binding domain Vc3S01_RS20120 PF03476 MOSC N-terminal beta barrel domain Vc3S01_RS20125 PF02540 NAD synthase Vc3S01_RS20130 PF01467 Cytidylyltransferase-like Vc3S01_RS20170 PF00005 ABC transporter Vc3S01_RS20175 PF01032 FecCD transport family Vc3S01_RS20185 PF02472 Biopolymer transport protein ExbD/TolR Vc3S01_RS20190 PF01618 MotA/TolQ/ExbB proton channel family Vc3S01_RS20195 PF03544 Gram-negative bacterial TonB protein C-terminal Vc3S01_RS20200 PF04055 Radical SAM superfamily Vc3S01_RS20205 PF06228 Haem utilisation ChuX/HutX Vc3S01_RS20210 PF01243 Pyridoxamine 5'-phosphate oxidase Vc3S01_RS20225 PF00072 Response regulator receiver domain Vc3S01_RS20225 PF01584 CheW-like domain Vc3S01_RS20235 PF01653 NAD-dependent DNA ligase adenylation domain Vc3S01_RS20235 PF00533 BRCA1 C Terminus (BRCT) domain Vc3S01_RS20235 PF03120 NAD-dependent DNA ligase OB-fold domain Vc3S01_RS20235 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Vc3S01_RS20235 PF12826 Helix-hairpin-helix motif Vc3S01_RS20240 PF00128 Alpha amylase, catalytic domain Vc3S01_RS20250 PF03466 LysR substrate binding domain Vc3S01_RS20250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS20280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS20280 PF03466 LysR substrate binding domain Vc3S01_RS20290 PF00999 Sodium/hydrogen exchanger family Vc3S01_RS20290 PF02254 TrkA-N domain Vc3S01_RS20295 PF02525 Flavodoxin-like fold Vc3S01_RS20300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS20300 PF03466 LysR substrate binding domain Vc3S01_RS20335 PF01965 DJ-1/PfpI family Vc3S01_RS20335 PF12833 Helix-turn-helix domain Vc3S01_RS20340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vc3S01_RS20350 PF08019 Phosphoethanolamine transferase EptA/EptB Vc3S01_RS20350 PF00884 Sulfatase Vc3S01_RS20355 PF01219 Prokaryotic diacylglycerol kinase Vc3S01_RS20365 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS20365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS20365 PF00672 HAMP domain Vc3S01_RS20370 PF00072 Response regulator receiver domain Vc3S01_RS20370 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS20380 PF13737 Transposase DDE domain Vc3S01_RS20385 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS20385 PF08218 Citrate lyase ligase C-terminal domain Vc3S01_RS20390 PF00106 short chain dehydrogenase Vc3S01_RS20405 PF01323 DSBA-like thioredoxin domain Vc3S01_RS20420 PF00255 Glutathione peroxidase Vc3S01_RS20425 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Vc3S01_RS20435 PF07690 Major Facilitator Superfamily Vc3S01_RS20450 PF01966 HD domain Vc3S01_RS20465 PF07969 Amidohydrolase family Vc3S01_RS20470 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin Vc3S01_RS20475 PF03448 MgtE intracellular N domain Vc3S01_RS20475 PF00571 CBS domain Vc3S01_RS20475 PF01769 Divalent cation transporter Vc3S01_RS20480 PF03109 ABC1 family Vc3S01_RS20485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS20485 PF00529 HlyD membrane-fusion protein of T1SS Vc3S01_RS20505 PF10124 Mu-like prophage major head subunit gpT Vc3S01_RS20590 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS20590 PF00072 Response regulator receiver domain Vc3S01_RS20595 PF00672 HAMP domain Vc3S01_RS20595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS20595 PF16527 Two-component sensor protein CpxA, periplasmic domain Vc3S01_RS20595 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS20605 PF00155 Aminotransferase class I and II Vc3S01_RS20605 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS20610 PF13520 Amino acid permease Vc3S01_RS20615 PF01037 Lrp/AsnC ligand binding domain Vc3S01_RS20625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS20625 PF03466 LysR substrate binding domain Vc3S01_RS20645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Vc3S01_RS20645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Vc3S01_RS20650 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS20650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS20650 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vc3S01_RS20650 PF01627 Hpt domain Vc3S01_RS20650 PF00672 HAMP domain Vc3S01_RS20650 PF00072 Response regulator receiver domain Vc3S01_RS20655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vc3S01_RS20665 PF13693 Winged helix-turn-helix DNA-binding Vc3S01_RS20670 PF02316 Mu DNA-binding domain Vc3S01_RS20670 PF09039 Mu DNA binding, I gamma subdomain Vc3S01_RS20670 PF02914 Bacteriophage Mu transposase Vc3S01_RS20670 PF09299 Mu transposase, C-terminal Vc3S01_RS20675 PF13401 AAA domain Vc3S01_RS20675 PF09077 Mu B transposition protein, C terminal Vc3S01_RS20755 PF08765 Mor transcription activator family Vc3S01_RS20790 PF08461 Ribonuclease R winged-helix domain Vc3S01_RS20795 PF11985 Protein of unknown function (DUF3486) Vc3S01_RS20805 PF03237 Terminase-like family Vc3S01_RS20810 PF06074 Protein of unknown function (DUF935) Vc3S01_RS20825 PF10124 Mu-like prophage major head subunit gpT Vc3S01_RS20845 PF07030 Protein of unknown function (DUF1320) Vc3S01_RS20865 PF17482 Phage tail sheath C-terminal domain Vc3S01_RS20865 PF04984 Phage tail sheath protein subtilisin-like domain Vc3S01_RS20875 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 Vc3S01_RS20905 PF04865 Baseplate J-like protein Vc3S01_RS20910 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) Vc3S01_RS20930 PF04363 Protein of unknown function (DUF496) Vc3S01_RS20940 PF04337 Protein of unknown function, DUF480 Vc3S01_RS20945 PF01541 GIY-YIG catalytic domain Vc3S01_RS20950 PF13407 Periplasmic binding protein domain Vc3S01_RS20955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS20955 PF00072 Response regulator receiver domain Vc3S01_RS20955 PF09308 LuxQ, periplasmic Vc3S01_RS20955 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS20970 PF01037 Lrp/AsnC ligand binding domain Vc3S01_RS21000 PF02355 Protein export membrane protein Vc3S01_RS21000 PF13721 SecD export protein N-terminal TM region Vc3S01_RS21000 PF07549 SecD/SecF GG Motif Vc3S01_RS21005 PF02355 Protein export membrane protein Vc3S01_RS21005 PF07549 SecD/SecF GG Motif Vc3S01_RS21015 PF01810 LysE type translocator Vc3S01_RS21020 PF00106 short chain dehydrogenase Vc3S01_RS21025 PF00108 Thiolase, N-terminal domain Vc3S01_RS21025 PF02803 Thiolase, C-terminal domain Vc3S01_RS21035 PF00561 alpha/beta hydrolase fold Vc3S01_RS21035 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus Vc3S01_RS21045 PF03264 NapC/NirT cytochrome c family, N-terminal region Vc3S01_RS21050 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) Vc3S01_RS21055 PF01568 Molydopterin dinucleotide binding domain Vc3S01_RS21055 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS21055 PF00384 Molybdopterin oxidoreductase Vc3S01_RS21065 PF12838 4Fe-4S dicluster domain Vc3S01_RS21065 PF13187 4Fe-4S dicluster domain Vc3S01_RS21070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS21070 PF07730 Histidine kinase Vc3S01_RS21070 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term Vc3S01_RS21070 PF00672 HAMP domain Vc3S01_RS21075 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS21075 PF00072 Response regulator receiver domain Vc3S01_RS21090 PF01546 Peptidase family M20/M25/M40 Vc3S01_RS21090 PF07687 Peptidase dimerisation domain Vc3S01_RS21095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vc3S01_RS21105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS21110 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS21115 PF12729 Four helix bundle sensory module for signal transduction Vc3S01_RS21115 PF00672 HAMP domain Vc3S01_RS21115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS21120 PF00472 RF-1 domain Vc3S01_RS21125 PF13419 Haloacid dehalogenase-like hydrolase Vc3S01_RS21130 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Vc3S01_RS21130 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase Vc3S01_RS21140 PF05736 OprF membrane domain Vc3S01_RS21140 PF00691 OmpA family Vc3S01_RS21160 PF00313 'Cold-shock' DNA-binding domain Vc3S01_RS21165 PF03889 Alternative ribosome-rescue factor A Vc3S01_RS21175 PF08448 PAS fold Vc3S01_RS21175 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS21190 PF00005 ABC transporter Vc3S01_RS21190 PF12704 MacB-like periplasmic core domain Vc3S01_RS21190 PF02687 FtsX-like permease family Vc3S01_RS21195 PF00005 ABC transporter Vc3S01_RS21205 PF00672 HAMP domain Vc3S01_RS21205 PF12729 Four helix bundle sensory module for signal transduction Vc3S01_RS21205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS21210 PF00210 Ferritin-like domain Vc3S01_RS21220 PF02016 LD-carboxypeptidase N-terminal domain Vc3S01_RS21220 PF17676 LD-carboxypeptidase C-terminal domain Vc3S01_RS21225 PF07995 Glucose / Sorbosone dehydrogenase Vc3S01_RS21230 PF00465 Iron-containing alcohol dehydrogenase Vc3S01_RS21240 PF00892 EamA-like transporter family Vc3S01_RS21250 PF03466 LysR substrate binding domain Vc3S01_RS21250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS21265 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS21265 PF00501 AMP-binding enzyme Vc3S01_RS21270 PF00351 Biopterin-dependent aromatic amino acid hydroxylase Vc3S01_RS21275 PF01329 Pterin 4 alpha carbinolamine dehydratase Vc3S01_RS21300 PF12843 Putative quorum-sensing-regulated virulence factor Vc3S01_RS21320 PF01470 Pyroglutamyl peptidase Vc3S01_RS21335 PF05231 MASE1 Vc3S01_RS21335 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS21335 PF08448 PAS fold Vc3S01_RS21335 PF08447 PAS fold Vc3S01_RS21335 PF00563 EAL domain Vc3S01_RS21335 PF13426 PAS domain Vc3S01_RS21340 PF00270 DEAD/DEAH box helicase Vc3S01_RS21340 PF00271 Helicase conserved C-terminal domain Vc3S01_RS21360 PF00563 EAL domain Vc3S01_RS21360 PF12792 CSS motif domain associated with EAL Vc3S01_RS21365 PF00005 ABC transporter Vc3S01_RS21390 PF13737 Transposase DDE domain Vc3S01_RS21405 PF01575 MaoC like domain Vc3S01_RS21410 PF12849 PBP superfamily domain Vc3S01_RS21420 PF12833 Helix-turn-helix domain Vc3S01_RS21425 PF00575 S1 RNA binding domain Vc3S01_RS21425 PF00773 RNB domain Vc3S01_RS21425 PF08206 Ribonuclease B OB domain Vc3S01_RS21430 PF00271 Helicase conserved C-terminal domain Vc3S01_RS21430 PF00270 DEAD/DEAH box helicase Vc3S01_RS21430 PF03880 DbpA RNA binding domain Vc3S01_RS21435 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS21435 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS21435 PF00563 EAL domain Vc3S01_RS21440 PF00871 Acetokinase family Vc3S01_RS21505 PF07745 Glycosyl hydrolase family 53 Vc3S01_RS21510 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS21515 PF17912 MalK OB fold domain Vc3S01_RS21515 PF00005 ABC transporter Vc3S01_RS21520 PF13416 Bacterial extracellular solute-binding protein Vc3S01_RS21525 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS21530 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS21535 PF07745 Glycosyl hydrolase family 53 Vc3S01_RS21540 PF08532 Beta-galactosidase trimerisation domain Vc3S01_RS21540 PF08533 Beta-galactosidase C-terminal domain Vc3S01_RS21540 PF02449 Beta-galactosidase Vc3S01_RS21545 PF02264 LamB porin Vc3S01_RS21550 PF12729 Four helix bundle sensory module for signal transduction Vc3S01_RS21550 PF00672 HAMP domain Vc3S01_RS21550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS21555 PF16363 GDP-mannose 4,6 dehydratase Vc3S01_RS21560 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Vc3S01_RS21560 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Vc3S01_RS21565 PF10509 Galactokinase galactose-binding signature Vc3S01_RS21565 PF08544 GHMP kinases C terminal Vc3S01_RS21565 PF00288 GHMP kinases N terminal domain Vc3S01_RS21605 PF02463 RecF/RecN/SMC N terminal domain Vc3S01_RS21610 PF07804 HipA-like C-terminal domain Vc3S01_RS21610 PF13657 HipA N-terminal domain Vc3S01_RS21630 PF00350 Dynamin family Vc3S01_RS21635 PF13990 YjcZ-like protein Vc3S01_RS21640 PF01734 Patatin-like phospholipase Vc3S01_RS21650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Vc3S01_RS21650 PF00034 Cytochrome c Vc3S01_RS21660 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vc3S01_RS21665 PF00034 Cytochrome c Vc3S01_RS21695 PF00682 HMGL-like Vc3S01_RS21700 PF00378 Enoyl-CoA hydratase/isomerase Vc3S01_RS21705 PF01039 Carboxyl transferase domain Vc3S01_RS21710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vc3S01_RS21710 PF02770 Acyl-CoA dehydrogenase, middle domain Vc3S01_RS21710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vc3S01_RS21715 PF09278 MerR, DNA binding Vc3S01_RS21715 PF00376 MerR family regulatory protein Vc3S01_RS21720 PF02803 Thiolase, C-terminal domain Vc3S01_RS21720 PF00108 Thiolase, N-terminal domain Vc3S01_RS21725 PF00171 Aldehyde dehydrogenase family Vc3S01_RS21730 PF02770 Acyl-CoA dehydrogenase, middle domain Vc3S01_RS21730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Vc3S01_RS21730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Vc3S01_RS21735 PF00378 Enoyl-CoA hydratase/isomerase Vc3S01_RS21740 PF00378 Enoyl-CoA hydratase/isomerase Vc3S01_RS21745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vc3S01_RS21745 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vc3S01_RS21755 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vc3S01_RS21755 PF06481 COX Aromatic Rich Motif Vc3S01_RS21760 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vc3S01_RS21765 PF00510 Cytochrome c oxidase subunit III Vc3S01_RS21770 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Vc3S01_RS21775 PF01040 UbiA prenyltransferase family Vc3S01_RS21780 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vc3S01_RS21780 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS21785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS21785 PF03466 LysR substrate binding domain Vc3S01_RS21795 PF00171 Aldehyde dehydrogenase family Vc3S01_RS21805 PF02028 BCCT, betaine/carnitine/choline family transporter Vc3S01_RS21820 PF01447 Thermolysin metallopeptidase, catalytic domain Vc3S01_RS21820 PF07504 Fungalysin/Thermolysin Propeptide Motif Vc3S01_RS21820 PF03413 Peptidase propeptide and YPEB domain Vc3S01_RS21820 PF02868 Thermolysin metallopeptidase, alpha-helical domain Vc3S01_RS21820 PF04151 Bacterial pre-peptidase C-terminal domain Vc3S01_RS21825 PF04389 Peptidase family M28 Vc3S01_RS21825 PF04151 Bacterial pre-peptidase C-terminal domain Vc3S01_RS21860 PF00005 ABC transporter Vc3S01_RS21865 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS21870 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS21875 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS21885 PF03466 LysR substrate binding domain Vc3S01_RS21885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS21890 PF00043 Glutathione S-transferase, C-terminal domain Vc3S01_RS21890 PF13417 Glutathione S-transferase, N-terminal domain Vc3S01_RS21900 PF00563 EAL domain Vc3S01_RS21900 PF12792 CSS motif domain associated with EAL Vc3S01_RS21910 PF01012 Electron transfer flavoprotein domain Vc3S01_RS21915 PF00766 Electron transfer flavoprotein FAD-binding domain Vc3S01_RS21915 PF01012 Electron transfer flavoprotein domain Vc3S01_RS21920 PF00364 Biotin-requiring enzyme Vc3S01_RS21920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Vc3S01_RS21920 PF02817 e3 binding domain Vc3S01_RS21925 PF02780 Transketolase, C-terminal domain Vc3S01_RS21925 PF02779 Transketolase, pyrimidine binding domain Vc3S01_RS21930 PF00676 Dehydrogenase E1 component Vc3S01_RS21945 PF00012 Hsp70 protein Vc3S01_RS21985 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS21985 PF00072 Response regulator receiver domain Vc3S01_RS22000 PF00245 Alkaline phosphatase Vc3S01_RS22010 PF01483 Proprotein convertase P-domain Vc3S01_RS22010 PF00082 Subtilase family Vc3S01_RS22020 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS22030 PF03222 Tryptophan/tyrosine permease family Vc3S01_RS22035 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS22035 PF08448 PAS fold Vc3S01_RS22035 PF00563 EAL domain Vc3S01_RS22045 PF00384 Molybdopterin oxidoreductase Vc3S01_RS22045 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS22045 PF01568 Molydopterin dinucleotide binding domain Vc3S01_RS22050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vc3S01_RS22050 PF14824 Sirohaem biosynthesis protein central Vc3S01_RS22050 PF10414 Sirohaem synthase dimerisation region Vc3S01_RS22055 PF02885 Glycosyl transferase family, helical bundle domain Vc3S01_RS22055 PF00591 Glycosyl transferase family, a/b domain Vc3S01_RS22060 PF01738 Dienelactone hydrolase family Vc3S01_RS22065 PF03861 ANTAR domain Vc3S01_RS22065 PF00072 Response regulator receiver domain Vc3S01_RS22075 PF00005 ABC transporter Vc3S01_RS22080 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS22085 PF00005 ABC transporter Vc3S01_RS22090 PF04324 BFD-like [2Fe-2S] binding domain Vc3S01_RS22090 PF13806 Rieske-like [2Fe-2S] domain Vc3S01_RS22090 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS22090 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vc3S01_RS22090 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vc3S01_RS22090 PF18267 Rubredoxin NAD+ reductase C-terminal domain Vc3S01_RS22105 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS22105 PF08361 MAATS-type transcriptional repressor, C-terminal region Vc3S01_RS22120 PF00072 Response regulator receiver domain Vc3S01_RS22120 PF00211 Adenylate and Guanylate cyclase catalytic domain Vc3S01_RS22125 PF01979 Amidohydrolase family Vc3S01_RS22135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vc3S01_RS22145 PF08525 Opacity-associated protein A N-terminal motif Vc3S01_RS22145 PF01476 LysM domain Vc3S01_RS22145 PF01551 Peptidase family M23 Vc3S01_RS22175 PF01594 AI-2E family transporter Vc3S01_RS22180 PF00072 Response regulator receiver domain Vc3S01_RS22180 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS22260 PF07690 Major Facilitator Superfamily Vc3S01_RS22275 PF00293 NUDIX domain Vc3S01_RS22295 PF02583 Metal-sensitive transcriptional repressor Vc3S01_RS22305 PF00005 ABC transporter Vc3S01_RS22305 PF00664 ABC transporter transmembrane region Vc3S01_RS22315 PF00089 Trypsin Vc3S01_RS22330 PF03466 LysR substrate binding domain Vc3S01_RS22330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS22335 PF17848 Acetyl-coA carboxylase zinc finger domain Vc3S01_RS22335 PF01039 Carboxyl transferase domain Vc3S01_RS22355 PF00884 Sulfatase Vc3S01_RS22360 PF16347 Domain of unknown function (DUF4976) Vc3S01_RS22360 PF00884 Sulfatase Vc3S01_RS22365 PF04055 Radical SAM superfamily Vc3S01_RS22365 PF13186 Iron-sulfur cluster-binding domain Vc3S01_RS22385 PF12833 Helix-turn-helix domain Vc3S01_RS22385 PF02311 AraC-like ligand binding domain Vc3S01_RS22455 PF02347 Glycine cleavage system P-protein Vc3S01_RS22460 PF01597 Glycine cleavage H-protein Vc3S01_RS22465 PF00464 Serine hydroxymethyltransferase Vc3S01_RS22475 PF01571 Aminomethyltransferase folate-binding domain Vc3S01_RS22475 PF08669 Glycine cleavage T-protein C-terminal barrel domain Vc3S01_RS22485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS22490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS22495 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS22505 PF02378 Phosphotransferase system, EIIC Vc3S01_RS22505 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vc3S01_RS22510 PF00294 pfkB family carbohydrate kinase Vc3S01_RS22515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vc3S01_RS22515 PF00381 PTS HPr component phosphorylation site Vc3S01_RS22520 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS22520 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vc3S01_RS22535 PF00563 EAL domain Vc3S01_RS22535 PF01590 GAF domain Vc3S01_RS22535 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS22535 PF00989 PAS fold Vc3S01_RS22540 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS22545 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS22550 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS22555 PF00005 ABC transporter Vc3S01_RS22565 PF00465 Iron-containing alcohol dehydrogenase Vc3S01_RS22570 PF12833 Helix-turn-helix domain Vc3S01_RS22570 PF06719 AraC-type transcriptional regulator N-terminus Vc3S01_RS22580 PF06483 Chitinase C Vc3S01_RS22580 PF00704 Glycosyl hydrolases family 18 Vc3S01_RS22585 PF00483 Nucleotidyl transferase Vc3S01_RS22590 PF01268 Formate--tetrahydrofolate ligase Vc3S01_RS22595 PF00294 pfkB family carbohydrate kinase Vc3S01_RS22610 PF11849 Domain of unknown function (DUF3369) Vc3S01_RS22615 PF13419 Haloacid dehalogenase-like hydrolase Vc3S01_RS22620 PF17200 Single Cache domain 2 Vc3S01_RS22620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS22620 PF00672 HAMP domain Vc3S01_RS22630 PF04336 Acyl carrier protein phosphodiesterase Vc3S01_RS22635 PF00270 DEAD/DEAH box helicase Vc3S01_RS22635 PF00271 Helicase conserved C-terminal domain Vc3S01_RS22640 PF00563 EAL domain Vc3S01_RS22640 PF12792 CSS motif domain associated with EAL Vc3S01_RS22655 PF01292 Prokaryotic cytochrome b561 Vc3S01_RS22660 PF04264 YceI-like domain Vc3S01_RS22665 PF01226 Formate/nitrite transporter Vc3S01_RS22675 PF03466 LysR substrate binding domain Vc3S01_RS22675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS22680 PF06496 Protein of unknown function (DUF1097) Vc3S01_RS22685 PF11398 Protein of unknown function (DUF2813) Vc3S01_RS22690 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS22690 PF02872 5'-nucleotidase, C-terminal domain Vc3S01_RS22695 PF03741 Integral membrane protein TerC family Vc3S01_RS22705 PF00809 Pterin binding enzyme Vc3S01_RS22705 PF02574 Homocysteine S-methyltransferase Vc3S01_RS22705 PF02607 B12 binding domain Vc3S01_RS22705 PF02965 Vitamin B12 dependent methionine synthase, activation domain Vc3S01_RS22705 PF02310 B12 binding domain Vc3S01_RS22720 PF12262 Bacterial virulence factor lipase N-terminal Vc3S01_RS22725 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_RS22735 PF01435 Peptidase family M48 Vc3S01_RS22740 PF03061 Thioesterase superfamily Vc3S01_RS22750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS22750 PF12793 Sugar transport-related sRNA regulator N-term Vc3S01_RS22775 PF00226 DnaJ domain Vc3S01_RS22775 PF01556 DnaJ C terminal domain Vc3S01_RS22775 PF00684 DnaJ central domain Vc3S01_RS22785 PF13188 PAS domain Vc3S01_RS22785 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS22785 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS22785 PF00563 EAL domain Vc3S01_RS22790 PF07055 Enoyl reductase FAD binding domain Vc3S01_RS22790 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase Vc3S01_RS22790 PF12241 Trans-2-enoyl-CoA reductase catalytic region Vc3S01_RS22795 PF13472 GDSL-like Lipase/Acylhydrolase family Vc3S01_RS22800 PF00005 ABC transporter Vc3S01_RS22815 PF02626 Carboxyltransferase domain, subdomain A and B Vc3S01_RS22820 PF02682 Carboxyltransferase domain, subdomain C and D Vc3S01_RS22825 PF03746 LamB/YcsF family Vc3S01_RS22835 PF13426 PAS domain Vc3S01_RS22835 PF08447 PAS fold Vc3S01_RS22835 PF05231 MASE1 Vc3S01_RS22835 PF00563 EAL domain Vc3S01_RS22835 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS22835 PF08448 PAS fold Vc3S01_RS22840 PF16363 GDP-mannose 4,6 dehydratase Vc3S01_RS22850 PF07715 TonB-dependent Receptor Plug Domain Vc3S01_RS22850 PF04886 PT repeat Vc3S01_RS22850 PF00593 TonB dependent receptor Vc3S01_RS22855 PF03466 LysR substrate binding domain Vc3S01_RS22855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS22860 PF13607 Succinyl-CoA ligase like flavodoxin domain Vc3S01_RS22860 PF13380 CoA binding domain Vc3S01_RS22860 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS22865 PF05036 Sporulation related domain Vc3S01_RS22870 PF01820 D-ala D-ala ligase N-terminus Vc3S01_RS22870 PF07478 D-ala D-ala ligase C-terminus Vc3S01_RS22880 PF01253 Translation initiation factor SUI1 Vc3S01_RS22910 PF03701 Uncharacterised protein family (UPF0181) Vc3S01_RS22925 PF00072 Response regulator receiver domain Vc3S01_RS22925 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS22935 PF02233 NAD(P) transhydrogenase beta subunit Vc3S01_RS22940 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Vc3S01_RS22940 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Vc3S01_RS22940 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Vc3S01_RS22955 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS22960 PF00360 Phytochrome region Vc3S01_RS22960 PF00563 EAL domain Vc3S01_RS22960 PF01590 GAF domain Vc3S01_RS22960 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS22970 PF00005 ABC transporter Vc3S01_RS22970 PF03459 TOBE domain Vc3S01_RS22975 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS22985 PF07685 CobB/CobQ-like glutamine amidotransferase domain Vc3S01_RS22985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain Vc3S01_RS22990 PF04076 Bacterial OB fold (BOF) protein Vc3S01_RS23005 PF00155 Aminotransferase class I and II Vc3S01_RS23010 PF12833 Helix-turn-helix domain Vc3S01_RS23015 PF01554 MatE Vc3S01_RS23025 PF13597 Anaerobic ribonucleoside-triphosphate reductase Vc3S01_RS23025 PF03477 ATP cone domain Vc3S01_RS23050 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Vc3S01_RS23050 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS23085 PF07690 Major Facilitator Superfamily Vc3S01_RS23090 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS23090 PF00072 Response regulator receiver domain Vc3S01_RS23095 PF05231 MASE1 Vc3S01_RS23095 PF07730 Histidine kinase Vc3S01_RS23095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS23100 PF07690 Major Facilitator Superfamily Vc3S01_RS23105 PF01238 Phosphomannose isomerase type I Vc3S01_RS23115 PF01594 AI-2E family transporter Vc3S01_RS23125 PF00529 HlyD membrane-fusion protein of T1SS Vc3S01_RS23125 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS23150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Vc3S01_RS23150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Vc3S01_RS23155 PF00085 Thioredoxin Vc3S01_RS23160 PF07690 Major Facilitator Superfamily Vc3S01_RS23165 PF07495 Y_Y_Y domain Vc3S01_RS23165 PF00072 Response regulator receiver domain Vc3S01_RS23165 PF07494 Two component regulator propeller Vc3S01_RS23165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS23165 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS23165 PF12833 Helix-turn-helix domain Vc3S01_RS23170 PF01554 MatE Vc3S01_RS23175 PF11756 Nitrous oxide-stimulated promoter Vc3S01_RS23190 PF08269 Cache domain Vc3S01_RS23190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS23195 PF03605 Anaerobic c4-dicarboxylate membrane transporter Vc3S01_RS23210 PF14824 Sirohaem biosynthesis protein central Vc3S01_RS23210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vc3S01_RS23210 PF10414 Sirohaem synthase dimerisation region Vc3S01_RS23215 PF01226 Formate/nitrite transporter Vc3S01_RS23220 PF13806 Rieske-like [2Fe-2S] domain Vc3S01_RS23225 PF18267 Rubredoxin NAD+ reductase C-terminal domain Vc3S01_RS23225 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS23225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vc3S01_RS23225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vc3S01_RS23225 PF04324 BFD-like [2Fe-2S] binding domain Vc3S01_RS23230 PF01156 Inosine-uridine preferring nucleoside hydrolase Vc3S01_RS23235 PF17152 Periplasmic sensor domain Vc3S01_RS23235 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS23285 PF09154 Domain of unknown function (DUF1939) Vc3S01_RS23285 PF00128 Alpha amylase, catalytic domain Vc3S01_RS23310 PF13462 Thioredoxin Vc3S01_RS23320 PF01565 FAD binding domain Vc3S01_RS23320 PF09330 D-lactate dehydrogenase, membrane binding Vc3S01_RS23325 PF03466 LysR substrate binding domain Vc3S01_RS23325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS23340 PF05762 VWA domain containing CoxE-like protein Vc3S01_RS23345 PF07728 AAA domain (dynein-related subfamily) Vc3S01_RS23345 PF17868 AAA lid domain Vc3S01_RS23345 PF12592 Protein of unknown function (DUF3763) Vc3S01_RS23355 PF01212 Beta-eliminating lyase Vc3S01_RS23360 PF00034 Cytochrome c Vc3S01_RS23365 PF03606 C4-dicarboxylate anaerobic carrier Vc3S01_RS23375 PF07690 Major Facilitator Superfamily Vc3S01_RS23385 PF08212 Lipocalin-like domain Vc3S01_RS23415 PF00704 Glycosyl hydrolases family 18 Vc3S01_RS23425 PF13476 AAA domain Vc3S01_RS23430 PF12320 Type 5 capsule protein repressor C-terminal domain Vc3S01_RS23430 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS23450 PF03527 RHS protein Vc3S01_RS23465 PF04717 Type VI secretion system, phage-baseplate injector Vc3S01_RS23475 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS23475 PF07724 AAA domain (Cdc48 subfamily) Vc3S01_RS23475 PF17871 AAA lid domain Vc3S01_RS23475 PF10431 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS23485 PF05947 Type VI secretion system, TssF Vc3S01_RS23500 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_RS23505 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_RS23510 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 Vc3S01_RS23530 PF06744 Type VI secretion protein IcmF C-terminal Vc3S01_RS23530 PF14331 ImcF-related N-terminal domain Vc3S01_RS23530 PF06761 Intracellular multiplication and human macrophage-killing Vc3S01_RS23535 PF13677 Membrane MotB of proton-channel complex MotA/MotB Vc3S01_RS23535 PF00691 OmpA family Vc3S01_RS23540 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE Vc3S01_RS23555 PF03793 PASTA domain Vc3S01_RS23555 PF00069 Protein kinase domain Vc3S01_RS23585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS23590 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vc3S01_RS23600 PF01757 Acyltransferase family Vc3S01_RS23610 PF09722 Protein of unknown function (DUF2384) Vc3S01_RS23615 PF13187 4Fe-4S dicluster domain Vc3S01_RS23615 PF01645 Conserved region in glutamate synthase Vc3S01_RS23625 PF00753 Metallo-beta-lactamase superfamily Vc3S01_RS23640 PF00171 Aldehyde dehydrogenase family Vc3S01_RS23660 PF00892 EamA-like transporter family Vc3S01_RS23665 PF00893 Small Multidrug Resistance protein Vc3S01_RS23670 PF02868 Thermolysin metallopeptidase, alpha-helical domain Vc3S01_RS23670 PF04151 Bacterial pre-peptidase C-terminal domain Vc3S01_RS23670 PF01447 Thermolysin metallopeptidase, catalytic domain Vc3S01_RS23670 PF03413 Peptidase propeptide and YPEB domain Vc3S01_RS23670 PF07504 Fungalysin/Thermolysin Propeptide Motif Vc3S01_RS23685 PF01569 PAP2 superfamily Vc3S01_RS23700 PF00892 EamA-like transporter family Vc3S01_RS23710 PF07963 Prokaryotic N-terminal methylation motif Vc3S01_RS23715 PF01584 CheW-like domain Vc3S01_RS23715 PF00072 Response regulator receiver domain Vc3S01_RS23725 PF00881 Nitroreductase family Vc3S01_RS23730 PF00072 Response regulator receiver domain Vc3S01_RS23730 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS23735 PF03466 LysR substrate binding domain Vc3S01_RS23735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS23740 PF17158 Membrane-associated sensor, integral membrane domain Vc3S01_RS23740 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS23745 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS23745 PF00072 Response regulator receiver domain Vc3S01_RS23750 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS23750 PF00563 EAL domain Vc3S01_RS23750 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS23750 PF13188 PAS domain Vc3S01_RS23755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS23755 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS23755 PF09456 RcsC Alpha-Beta-Loop (ABL) Vc3S01_RS23755 PF00072 Response regulator receiver domain Vc3S01_RS23760 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS23760 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS23760 PF00563 EAL domain Vc3S01_RS23770 PF07715 TonB-dependent Receptor Plug Domain Vc3S01_RS23770 PF00593 TonB dependent receptor Vc3S01_RS23810 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE Vc3S01_RS23840 PF01037 Lrp/AsnC ligand binding domain Vc3S01_RS23850 PF05947 Type VI secretion system, TssF Vc3S01_RS23860 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath Vc3S01_RS23875 PF00069 Protein kinase domain Vc3S01_RS23900 PF04717 Type VI secretion system, phage-baseplate injector Vc3S01_RS23905 PF05638 Type VI secretion system effector, Hcp Vc3S01_RS23910 PF07724 AAA domain (Cdc48 subfamily) Vc3S01_RS23910 PF10431 C-terminal, D2-small domain, of ClpB protein Vc3S01_RS23910 PF00004 ATPase family associated with various cellular activities (AAA) Vc3S01_RS23910 PF17871 AAA lid domain Vc3S01_RS23915 PF00158 Sigma-54 interaction domain Vc3S01_RS23915 PF01590 GAF domain Vc3S01_RS23915 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS23925 PF00691 OmpA family Vc3S01_RS23950 PF01476 LysM domain Vc3S01_RS23950 PF01551 Peptidase family M23 Vc3S01_RS23950 PF08525 Opacity-associated protein A N-terminal motif Vc3S01_RS23955 PF01926 50S ribosome-binding GTPase Vc3S01_RS23960 PF00155 Aminotransferase class I and II Vc3S01_RS23965 PF00072 Response regulator receiver domain Vc3S01_RS23965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS23985 PF03606 C4-dicarboxylate anaerobic carrier Vc3S01_RS23990 PF04011 LemA family Vc3S01_RS23995 PF01435 Peptidase family M48 Vc3S01_RS24010 PF18081 Fanconi anemia-associated nuclease SAP domain Vc3S01_RS24010 PF08774 VRR-NUC domain Vc3S01_RS24020 PF04055 Radical SAM superfamily Vc3S01_RS24020 PF13186 Iron-sulfur cluster-binding domain Vc3S01_RS24025 PF03781 Sulfatase-modifying factor enzyme 1 Vc3S01_RS24040 PF04076 Bacterial OB fold (BOF) protein Vc3S01_RS24045 PF00781 Diacylglycerol kinase catalytic domain Vc3S01_RS24050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS24050 PF03466 LysR substrate binding domain Vc3S01_RS24055 PF01872 RibD C-terminal domain Vc3S01_RS24055 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Vc3S01_RS24060 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Vc3S01_RS24060 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Vc3S01_RS24065 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vc3S01_RS24065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vc3S01_RS24070 PF00231 ATP synthase Vc3S01_RS24075 PF00306 ATP synthase alpha/beta chain, C terminal domain Vc3S01_RS24075 PF02874 ATP synthase alpha/beta family, beta-barrel domain Vc3S01_RS24075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Vc3S01_RS24080 PF00213 ATP synthase delta (OSCP) subunit Vc3S01_RS24085 PF00430 ATP synthase B/B' CF(0) Vc3S01_RS24090 PF00137 ATP synthase subunit C Vc3S01_RS24095 PF00119 ATP synthase A chain Vc3S01_RS24115 PF00092 von Willebrand factor type A domain Vc3S01_RS24130 PF17863 AAA lid domain Vc3S01_RS24130 PF07726 ATPase family associated with various cellular activities (AAA) Vc3S01_RS24140 PF00884 Sulfatase Vc3S01_RS24145 PF00884 Sulfatase Vc3S01_RS24150 PF00072 Response regulator receiver domain Vc3S01_RS24150 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS24155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS24155 PF16750 Sensor domain of 2-component histidine kinase Vc3S01_RS24155 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS24155 PF00672 HAMP domain Vc3S01_RS24175 PF00072 Response regulator receiver domain Vc3S01_RS24175 PF00672 HAMP domain Vc3S01_RS24175 PF01627 Hpt domain Vc3S01_RS24175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS24175 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS24180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Vc3S01_RS24185 PF02142 MGS-like domain Vc3S01_RS24190 PF00580 UvrD/REP helicase N-terminal domain Vc3S01_RS24190 PF12462 DNA helicase IV / RNA helicase N terminal Vc3S01_RS24190 PF13361 UvrD-like helicase C-terminal domain Vc3S01_RS24195 PF12805 FUSC-like inner membrane protein yccS Vc3S01_RS24220 PF13411 MerR HTH family regulatory protein Vc3S01_RS24225 PF00005 ABC transporter Vc3S01_RS24230 PF01032 FecCD transport family Vc3S01_RS24235 PF01032 FecCD transport family Vc3S01_RS24240 PF01497 Periplasmic binding protein Vc3S01_RS24255 PF01048 Phosphorylase superfamily Vc3S01_RS24260 PF04973 Nicotinamide mononucleotide transporter Vc3S01_RS24270 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS24275 PF00294 pfkB family carbohydrate kinase Vc3S01_RS24280 PF13407 Periplasmic binding protein domain Vc3S01_RS24285 PF02653 Branched-chain amino acid transport system / permease component Vc3S01_RS24290 PF00005 ABC transporter Vc3S01_RS24295 PF05025 RbsD / FucU transport protein family Vc3S01_RS24300 PF00563 EAL domain Vc3S01_RS24300 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS24305 PF01048 Phosphorylase superfamily Vc3S01_RS24315 PF01177 Asp/Glu/Hydantoin racemase Vc3S01_RS24320 PF00293 NUDIX domain Vc3S01_RS24325 PF00293 NUDIX domain Vc3S01_RS24345 PF09335 SNARE associated Golgi protein Vc3S01_RS24375 PF04116 Fatty acid hydroxylase superfamily Vc3S01_RS24390 PF00072 Response regulator receiver domain Vc3S01_RS24390 PF09308 LuxQ, periplasmic Vc3S01_RS24390 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS24390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS24395 PF00034 Cytochrome c Vc3S01_RS24395 PF03150 Di-haem cytochrome c peroxidase Vc3S01_RS24400 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS24400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS24400 PF00072 Response regulator receiver domain Vc3S01_RS24400 PF09456 RcsC Alpha-Beta-Loop (ABL) Vc3S01_RS24405 PF00360 Phytochrome region Vc3S01_RS24405 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS24405 PF01590 GAF domain Vc3S01_RS24405 PF00563 EAL domain Vc3S01_RS24420 PF16200 C-terminal region of band_7 Vc3S01_RS24420 PF01145 SPFH domain / Band 7 family Vc3S01_RS24425 PF00881 Nitroreductase family Vc3S01_RS24430 PF00005 ABC transporter Vc3S01_RS24430 PF00571 CBS domain Vc3S01_RS24435 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS24440 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Vc3S01_RS24445 PF05199 GMC oxidoreductase Vc3S01_RS24445 PF00732 GMC oxidoreductase Vc3S01_RS24450 PF00171 Aldehyde dehydrogenase family Vc3S01_RS24455 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS24455 PF13977 BetI-type transcriptional repressor, C-terminal Vc3S01_RS24460 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS24460 PF07694 5TMR of 5TMR-LYT Vc3S01_RS24470 PF01979 Amidohydrolase family Vc3S01_RS24480 PF13737 Transposase DDE domain Vc3S01_RS24495 PF00691 OmpA family Vc3S01_RS24495 PF13488 Glycine zipper Vc3S01_RS24530 PF00437 Type II/IV secretion system protein Vc3S01_RS24535 PF10609 NUBPL iron-transfer P-loop NTPase Vc3S01_RS24545 PF00263 Bacterial type II and III secretion system protein Vc3S01_RS24545 PF04972 BON domain Vc3S01_RS24545 PF13629 Pilus formation protein N terminal region Vc3S01_RS24565 PF03466 LysR substrate binding domain Vc3S01_RS24565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS24570 PF12146 Serine aminopeptidase, S33 Vc3S01_RS24585 PF00478 IMP dehydrogenase / GMP reductase domain Vc3S01_RS24590 PF03853 YjeF-related protein N-terminus Vc3S01_RS24590 PF01256 Carbohydrate kinase Vc3S01_RS24600 PF00072 Response regulator receiver domain Vc3S01_RS24605 PF00248 Aldo/keto reductase family Vc3S01_RS24620 PF00654 Voltage gated chloride channel Vc3S01_RS24630 PF01566 Natural resistance-associated macrophage protein Vc3S01_RS24640 PF01227 GTP cyclohydrolase I Vc3S01_RS24645 PF03454 MoeA C-terminal region (domain IV) Vc3S01_RS24645 PF00994 Probable molybdopterin binding domain Vc3S01_RS24645 PF03453 MoeA N-terminal region (domain I and II) Vc3S01_RS24650 PF00899 ThiF family Vc3S01_RS24655 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Vc3S01_RS24660 PF00175 Oxidoreductase NAD-binding domain Vc3S01_RS24665 PF04443 Acyl-protein synthetase, LuxE Vc3S01_RS24670 PF00296 Luciferase-like monooxygenase Vc3S01_RS24675 PF00296 Luciferase-like monooxygenase Vc3S01_RS24680 PF02273 Acyl transferase Vc3S01_RS24685 PF05893 Acyl-CoA reductase (LuxC) Vc3S01_RS24705 PF00581 Rhodanese-like domain Vc3S01_RS24710 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS24710 PF00563 EAL domain Vc3S01_RS24710 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS24715 PF08329 Chitinase A, N-terminal domain Vc3S01_RS24715 PF00704 Glycosyl hydrolases family 18 Vc3S01_RS24735 PF00923 Transaldolase/Fructose-6-phosphate aldolase Vc3S01_RS24740 PF00456 Transketolase, thiamine diphosphate binding domain Vc3S01_RS24740 PF02780 Transketolase, C-terminal domain Vc3S01_RS24740 PF02779 Transketolase, pyrimidine binding domain Vc3S01_RS24745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS24745 PF08447 PAS fold Vc3S01_RS24750 PF07690 Major Facilitator Superfamily Vc3S01_RS24755 PF00793 DAHP synthetase I family Vc3S01_RS24760 PF01389 OmpA-like transmembrane domain Vc3S01_RS24760 PF00691 OmpA family Vc3S01_RS24765 PF01040 UbiA prenyltransferase family Vc3S01_RS24770 PF02628 Cytochrome oxidase assembly protein Vc3S01_RS24790 PF00510 Cytochrome c oxidase subunit III Vc3S01_RS24795 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Vc3S01_RS24800 PF00115 Cytochrome C and Quinol oxidase polypeptide I Vc3S01_RS24805 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Vc3S01_RS24805 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Vc3S01_RS24810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Vc3S01_RS24810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Vc3S01_RS24810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Vc3S01_RS24810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Vc3S01_RS24820 PF01810 LysE type translocator Vc3S01_RS24840 PF01557 Fumarylacetoacetate (FAA) hydrolase family Vc3S01_RS24855 PF00892 EamA-like transporter family Vc3S01_RS24860 PF00462 Glutaredoxin Vc3S01_RS24875 PF07690 Major Facilitator Superfamily Vc3S01_RS24880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS24880 PF03466 LysR substrate binding domain Vc3S01_RS24885 PF08448 PAS fold Vc3S01_RS24885 PF08447 PAS fold Vc3S01_RS24885 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS24885 PF00563 EAL domain Vc3S01_RS24890 PF01551 Peptidase family M23 Vc3S01_RS24890 PF01476 LysM domain Vc3S01_RS24890 PF08525 Opacity-associated protein A N-terminal motif Vc3S01_RS24910 PF07670 Nucleoside recognition Vc3S01_RS24915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS24915 PF02743 Cache domain Vc3S01_RS24915 PF00672 HAMP domain Vc3S01_RS24925 PF03222 Tryptophan/tyrosine permease family Vc3S01_RS24960 PF00107 Zinc-binding dehydrogenase Vc3S01_RS24960 PF08240 Alcohol dehydrogenase GroES-like domain Vc3S01_RS24965 PF02378 Phosphotransferase system, EIIC Vc3S01_RS24965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vc3S01_RS24970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vc3S01_RS24975 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS24985 PF01638 HxlR-like helix-turn-helix Vc3S01_RS25000 PF01758 Sodium Bile acid symporter family Vc3S01_RS25015 PF01161 Phosphatidylethanolamine-binding protein Vc3S01_RS25020 PF01042 Endoribonuclease L-PSP Vc3S01_RS25025 PF10282 Lactonase, 7-bladed beta-propeller Vc3S01_RS25030 PF02838 Glycosyl hydrolase family 20, domain 2 Vc3S01_RS25030 PF00728 Glycosyl hydrolase family 20, catalytic domain Vc3S01_RS25035 PF01081 KDPG and KHG aldolase Vc3S01_RS25040 PF00294 pfkB family carbohydrate kinase Vc3S01_RS25045 PF00474 Sodium:solute symporter family Vc3S01_RS25055 PF07969 Amidohydrolase family Vc3S01_RS25065 PF01418 Helix-turn-helix domain, rpiR family Vc3S01_RS25065 PF02685 Glucokinase Vc3S01_RS25065 PF01380 SIS domain Vc3S01_RS25070 PF00672 HAMP domain Vc3S01_RS25070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS25080 PF00005 ABC transporter Vc3S01_RS25095 PF01979 Amidohydrolase family Vc3S01_RS25105 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Vc3S01_RS25105 PF01568 Molydopterin dinucleotide binding domain Vc3S01_RS25105 PF00384 Molybdopterin oxidoreductase Vc3S01_RS25105 PF12838 4Fe-4S dicluster domain Vc3S01_RS25105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Vc3S01_RS25125 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS25170 PF00293 NUDIX domain Vc3S01_RS25185 PF03150 Di-haem cytochrome c peroxidase Vc3S01_RS25185 PF00034 Cytochrome c Vc3S01_RS25185 PF14376 Haem-binding domain Vc3S01_RS25195 PF13302 Acetyltransferase (GNAT) domain Vc3S01_RS25205 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) Vc3S01_RS25210 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS25215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS25215 PF00529 HlyD membrane-fusion protein of T1SS Vc3S01_RS25225 PF00326 Prolyl oligopeptidase family Vc3S01_RS25225 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Vc3S01_RS25240 PF00582 Universal stress protein family Vc3S01_RS25245 PF08220 DeoR-like helix-turn-helix domain Vc3S01_RS25245 PF00455 DeoR C terminal sensor domain Vc3S01_RS25250 PF03009 Glycerophosphoryl diester phosphodiesterase family Vc3S01_RS25255 PF13416 Bacterial extracellular solute-binding protein Vc3S01_RS25260 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS25265 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS25270 PF00005 ABC transporter Vc3S01_RS25270 PF17912 MalK OB fold domain Vc3S01_RS25285 PF01047 MarR family Vc3S01_RS25295 PF02492 CobW/HypB/UreG, nucleotide-binding domain Vc3S01_RS25295 PF07683 Cobalamin synthesis protein cobW C-terminal domain Vc3S01_RS25300 PF00132 Bacterial transferase hexapeptide (six repeats) Vc3S01_RS25305 PF01979 Amidohydrolase family Vc3S01_RS25315 PF01734 Patatin-like phospholipase Vc3S01_RS25320 PF05726 Pirin C-terminal cupin domain Vc3S01_RS25320 PF02678 Pirin Vc3S01_RS25325 PF00313 'Cold-shock' DNA-binding domain Vc3S01_RS25340 PF00962 Adenosine/AMP deaminase Vc3S01_RS25345 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS25350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS25350 PF03466 LysR substrate binding domain Vc3S01_RS25365 PF00462 Glutaredoxin Vc3S01_RS25365 PF08534 Redoxin Vc3S01_RS25380 PF07943 Penicillin-binding protein 5, C-terminal domain Vc3S01_RS25380 PF00768 D-alanyl-D-alanine carboxypeptidase Vc3S01_RS25385 PF02028 BCCT, betaine/carnitine/choline family transporter Vc3S01_RS25390 PF02798 Glutathione S-transferase, N-terminal domain Vc3S01_RS25395 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS25395 PF02909 Tetracyclin repressor-like, C-terminal domain Vc3S01_RS25400 PF01872 RibD C-terminal domain Vc3S01_RS25495 PF00155 Aminotransferase class I and II Vc3S01_RS25540 PF00270 DEAD/DEAH box helicase Vc3S01_RS25540 PF00271 Helicase conserved C-terminal domain Vc3S01_RS25550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS25550 PF03466 LysR substrate binding domain Vc3S01_RS25565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS25565 PF03466 LysR substrate binding domain Vc3S01_RS25570 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Vc3S01_RS25580 PF05816 Toxic anion resistance protein (TelA) Vc3S01_RS25590 PF05491 RuvB C-terminal winged helix domain Vc3S01_RS25590 PF05496 Holliday junction DNA helicase RuvB P-loop domain Vc3S01_RS25590 PF17864 RuvB AAA lid domain Vc3S01_RS25605 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) Vc3S01_RS25610 PF04228 Putative neutral zinc metallopeptidase Vc3S01_RS25620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS25620 PF03466 LysR substrate binding domain Vc3S01_RS25625 PF00709 Adenylosuccinate synthetase Vc3S01_RS25635 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS25635 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS25635 PF00563 EAL domain Vc3S01_RS25640 PF00710 Asparaginase, N-terminal Vc3S01_RS25640 PF17763 Glutaminase/Asparaginase C-terminal domain Vc3S01_RS25645 PF03618 Kinase/pyrophosphorylase Vc3S01_RS25650 PF00391 PEP-utilising enzyme, mobile domain Vc3S01_RS25650 PF02896 PEP-utilising enzyme, TIM barrel domain Vc3S01_RS25650 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Vc3S01_RS25660 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS25660 PF00072 Response regulator receiver domain Vc3S01_RS25665 PF00579 tRNA synthetases class I (W and Y) Vc3S01_RS25680 PF12833 Helix-turn-helix domain Vc3S01_RS25690 PF03466 LysR substrate binding domain Vc3S01_RS25690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS25700 PF03466 LysR substrate binding domain Vc3S01_RS25700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS25705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS25710 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS25715 PF02321 Outer membrane efflux protein Vc3S01_RS25720 PF02600 Disulfide bond formation protein DsbB Vc3S01_RS25725 PF03616 Sodium/glutamate symporter Vc3S01_RS25735 PF03707 Bacterial signalling protein N terminal repeat Vc3S01_RS25735 PF00563 EAL domain Vc3S01_RS25735 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS25745 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS25750 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Vc3S01_RS25750 PF00703 Glycosyl hydrolases family 2 Vc3S01_RS25750 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Vc3S01_RS25750 PF02837 Glycosyl hydrolases family 2, sugar binding domain Vc3S01_RS25755 PF02028 BCCT, betaine/carnitine/choline family transporter Vc3S01_RS25760 PF13193 AMP-binding enzyme C-terminal domain Vc3S01_RS25760 PF00501 AMP-binding enzyme Vc3S01_RS25815 PF00437 Type II/IV secretion system protein Vc3S01_RS25830 PF00263 Bacterial type II and III secretion system protein Vc3S01_RS25830 PF13629 Pilus formation protein N terminal region Vc3S01_RS25830 PF04972 BON domain Vc3S01_RS25880 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS25890 PF00873 AcrB/AcrD/AcrF family Vc3S01_RS25895 PF13533 Biotin-lipoyl like Vc3S01_RS25900 PF13091 PLD-like domain Vc3S01_RS25925 PF09278 MerR, DNA binding Vc3S01_RS25925 PF00376 MerR family regulatory protein Vc3S01_RS25930 PF03466 LysR substrate binding domain Vc3S01_RS25930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS25940 PF13378 Enolase C-terminal domain-like Vc3S01_RS25940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vc3S01_RS25950 PF03764 Elongation factor G, domain IV Vc3S01_RS25950 PF14492 Elongation Factor G, domain II Vc3S01_RS25950 PF00009 Elongation factor Tu GTP binding domain Vc3S01_RS25950 PF03144 Elongation factor Tu domain 2 Vc3S01_RS25950 PF00679 Elongation factor G C-terminus Vc3S01_RS25970 PF02001 Protein of unknown function DUF134 Vc3S01_RS25980 PF00528 Binding-protein-dependent transport system inner membrane component Vc3S01_RS25985 PF00005 ABC transporter Vc3S01_RS25985 PF00571 CBS domain Vc3S01_RS26000 PF01048 Phosphorylase superfamily Vc3S01_RS26005 PF00582 Universal stress protein family Vc3S01_RS26010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS26010 PF03466 LysR substrate binding domain Vc3S01_RS26020 PF01464 Transglycosylase SLT domain Vc3S01_RS26020 PF00497 Bacterial extracellular solute-binding proteins, family 3 Vc3S01_RS26030 PF06942 GlpM protein Vc3S01_RS26045 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Vc3S01_RS26045 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Vc3S01_RS26055 PF00857 Isochorismatase family Vc3S01_RS26060 PF00080 Copper/zinc superoxide dismutase (SODC) Vc3S01_RS26075 PF13737 Transposase DDE domain Vc3S01_RS26090 PF00455 DeoR C terminal sensor domain Vc3S01_RS26090 PF08220 DeoR-like helix-turn-helix domain Vc3S01_RS26095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS26100 PF01641 SelR domain Vc3S01_RS26100 PF01625 Peptide methionine sulfoxide reductase Vc3S01_RS26120 PF07971 Glycosyl hydrolase family 92 Vc3S01_RS26120 PF17678 Glycosyl hydrolase family 92 N-terminal domain Vc3S01_RS26125 PF07971 Glycosyl hydrolase family 92 Vc3S01_RS26125 PF17678 Glycosyl hydrolase family 92 N-terminal domain Vc3S01_RS26135 PF17678 Glycosyl hydrolase family 92 N-terminal domain Vc3S01_RS26135 PF07971 Glycosyl hydrolase family 92 Vc3S01_RS26140 PF17678 Glycosyl hydrolase family 92 N-terminal domain Vc3S01_RS26140 PF07971 Glycosyl hydrolase family 92 Vc3S01_RS26145 PF02872 5'-nucleotidase, C-terminal domain Vc3S01_RS26145 PF00149 Calcineurin-like phosphoesterase Vc3S01_RS26170 PF03466 LysR substrate binding domain Vc3S01_RS26170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS26175 PF01810 LysE type translocator Vc3S01_RS26180 PF00581 Rhodanese-like domain Vc3S01_RS26190 PF03466 LysR substrate binding domain Vc3S01_RS26190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS26205 PF09905 DNA-binding protein VF530 Vc3S01_RS26210 PF12848 ABC transporter Vc3S01_RS26210 PF00005 ABC transporter Vc3S01_RS26225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Vc3S01_RS26230 PF02567 Phenazine biosynthesis-like protein Vc3S01_RS26245 PF05114 Protein of unknown function (DUF692) Vc3S01_RS26260 PF01654 Cytochrome bd terminal oxidase subunit I Vc3S01_RS26265 PF02322 Cytochrome bd terminal oxidase subunit II Vc3S01_RS26275 PF01042 Endoribonuclease L-PSP Vc3S01_RS26285 PF00293 NUDIX domain Vc3S01_RS26285 PF13344 Haloacid dehalogenase-like hydrolase Vc3S01_RS26300 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS26300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS26300 PF00072 Response regulator receiver domain Vc3S01_RS26300 PF01627 Hpt domain Vc3S01_RS26300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) Vc3S01_RS26300 PF00672 HAMP domain Vc3S01_RS26315 PF01228 Glycine radical Vc3S01_RS26315 PF02901 Pyruvate formate lyase-like Vc3S01_RS26320 PF04055 Radical SAM superfamily Vc3S01_RS26325 PF00923 Transaldolase/Fructose-6-phosphate aldolase Vc3S01_RS26340 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS26340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS26340 PF00672 HAMP domain Vc3S01_RS26345 PF00486 Transcriptional regulatory protein, C terminal Vc3S01_RS26345 PF00072 Response regulator receiver domain Vc3S01_RS26355 PF00583 Acetyltransferase (GNAT) family Vc3S01_RS26365 PF07690 Major Facilitator Superfamily Vc3S01_RS26370 PF03466 LysR substrate binding domain Vc3S01_RS26370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS26375 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family Vc3S01_RS26385 PF00892 EamA-like transporter family Vc3S01_RS26405 PF00529 HlyD membrane-fusion protein of T1SS Vc3S01_RS26405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Vc3S01_RS26415 PF01594 AI-2E family transporter Vc3S01_RS26420 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) Vc3S01_RS26435 PF00175 Oxidoreductase NAD-binding domain Vc3S01_RS26435 PF00970 Oxidoreductase FAD-binding domain Vc3S01_RS26445 PF09905 DNA-binding protein VF530 Vc3S01_RS26450 PF03466 LysR substrate binding domain Vc3S01_RS26450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS26460 PF07943 Penicillin-binding protein 5, C-terminal domain Vc3S01_RS26460 PF00768 D-alanyl-D-alanine carboxypeptidase Vc3S01_RS26465 PF00561 alpha/beta hydrolase fold Vc3S01_RS26475 PF00581 Rhodanese-like domain Vc3S01_RS26475 PF17773 UPF0176 acylphosphatase like domain Vc3S01_RS26485 PF03441 FAD binding domain of DNA photolyase Vc3S01_RS26485 PF00875 DNA photolyase Vc3S01_RS26490 PF02469 Fasciclin domain Vc3S01_RS26500 PF01734 Patatin-like phospholipase Vc3S01_RS26510 PF00881 Nitroreductase family Vc3S01_RS26520 PF02563 Polysaccharide biosynthesis/export protein Vc3S01_RS26520 PF10531 SLBB domain Vc3S01_RS26520 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Vc3S01_RS26525 PF01451 Low molecular weight phosphotyrosine protein phosphatase Vc3S01_RS26530 PF13614 AAA domain Vc3S01_RS26530 PF13807 G-rich domain on putative tyrosine kinase Vc3S01_RS26530 PF02706 Chain length determinant protein Vc3S01_RS26560 PF00375 Sodium:dicarboxylate symporter family Vc3S01_RS26570 PF06803 Protein of unknown function (DUF1232) Vc3S01_RS26575 PF07687 Peptidase dimerisation domain Vc3S01_RS26575 PF01546 Peptidase family M20/M25/M40 Vc3S01_RS26580 PF07670 Nucleoside recognition Vc3S01_RS26585 PF07670 Nucleoside recognition Vc3S01_RS26600 PF00128 Alpha amylase, catalytic domain Vc3S01_RS26605 PF00912 Transglycosylase Vc3S01_RS26610 PF00128 Alpha amylase, catalytic domain Vc3S01_RS26610 PF02806 Alpha amylase, C-terminal all-beta domain Vc3S01_RS26610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vc3S01_RS26615 PF02446 4-alpha-glucanotransferase Vc3S01_RS26620 PF00343 Carbohydrate phosphorylase Vc3S01_RS26630 PF17874 MalT-like TPR region Vc3S01_RS26630 PF00196 Bacterial regulatory proteins, luxR family Vc3S01_RS26645 PF02630 SCO1/SenC Vc3S01_RS26655 PF00367 phosphotransferase system, EIIB Vc3S01_RS26655 PF02378 Phosphotransferase system, EIIC Vc3S01_RS26655 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Vc3S01_RS26660 PF03193 RsgA GTPase Vc3S01_RS26665 PF00375 Sodium:dicarboxylate symporter family Vc3S01_RS26670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vc3S01_RS26670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Vc3S01_RS26685 PF01116 Fructose-bisphosphate aldolase class-II Vc3S01_RS26695 PF00294 pfkB family carbohydrate kinase Vc3S01_RS26700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Vc3S01_RS26700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Vc3S01_RS26705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Vc3S01_RS26705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Vc3S01_RS26705 PF00205 Thiamine pyrophosphate enzyme, central domain Vc3S01_RS26710 PF01261 Xylose isomerase-like TIM barrel Vc3S01_RS26715 PF00083 Sugar (and other) transporter Vc3S01_RS26735 PF00108 Thiolase, N-terminal domain Vc3S01_RS26735 PF02803 Thiolase, C-terminal domain Vc3S01_RS26740 PF01144 Coenzyme A transferase Vc3S01_RS26745 PF01144 Coenzyme A transferase Vc3S01_RS26755 PF08543 Phosphomethylpyrimidine kinase Vc3S01_RS26765 PF13520 Amino acid permease Vc3S01_RS26770 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain Vc3S01_RS26770 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain Vc3S01_RS26770 PF01276 Orn/Lys/Arg decarboxylase, major domain Vc3S01_RS26785 PF18494 Pullulanase Ins domain Vc3S01_RS26785 PF03714 Bacterial pullanase-associated domain Vc3S01_RS26785 PF11852 Domain of unknown function (DUF3372) Vc3S01_RS26785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vc3S01_RS26785 PF17967 Pullulanase N2 domain Vc3S01_RS26790 PF04231 Endonuclease I Vc3S01_RS26795 PF16657 Maltogenic Amylase, C-terminal domain Vc3S01_RS26795 PF00128 Alpha amylase, catalytic domain Vc3S01_RS26795 PF02903 Alpha amylase, N-terminal ig-like domain Vc3S01_RS26810 PF02264 LamB porin Vc3S01_RS26815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Vc3S01_RS26815 PF00128 Alpha amylase, catalytic domain Vc3S01_RS26820 PF00990 Diguanylate cyclase, GGDEF domain Vc3S01_RS26825 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Vc3S01_RS26825 PF14824 Sirohaem biosynthesis protein central Vc3S01_RS26825 PF10414 Sirohaem synthase dimerisation region Vc3S01_RS26830 PF17179 4Fe-4S dicluster domain Vc3S01_RS26835 PF00175 Oxidoreductase NAD-binding domain Vc3S01_RS26835 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B Vc3S01_RS26840 PF13187 4Fe-4S dicluster domain Vc3S01_RS26840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Vc3S01_RS26840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Vc3S01_RS26855 PF03313 Serine dehydratase alpha chain Vc3S01_RS26855 PF03315 Serine dehydratase beta chain Vc3S01_RS26860 PF00474 Sodium:solute symporter family Vc3S01_RS26880 PF00356 Bacterial regulatory proteins, lacI family Vc3S01_RS26890 PF07690 Major Facilitator Superfamily Vc3S01_RS26895 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS26895 PF08360 QacR-like protein, C-terminal region Vc3S01_RS26905 PF13533 Biotin-lipoyl like Vc3S01_RS26920 PF04225 Opacity-associated protein A LysM-like domain Vc3S01_RS26920 PF01551 Peptidase family M23 Vc3S01_RS26935 PF01081 KDPG and KHG aldolase Vc3S01_RS26940 PF00294 pfkB family carbohydrate kinase Vc3S01_RS26945 PF02378 Phosphotransferase system, EIIC Vc3S01_RS26945 PF00367 phosphotransferase system, EIIB Vc3S01_RS26945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Vc3S01_RS26950 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Vc3S01_RS26950 PF13378 Enolase C-terminal domain-like Vc3S01_RS26955 PF07702 UTRA domain Vc3S01_RS26955 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS26980 PF02753 Pili assembly chaperone PapD, C-terminal domain Vc3S01_RS26980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain Vc3S01_RS26985 PF13953 PapC C-terminal domain Vc3S01_RS26985 PF13954 PapC N-terminal domain Vc3S01_RS26985 PF00577 Outer membrane usher protein Vc3S01_RS27005 PF01238 Phosphomannose isomerase type I Vc3S01_RS27010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit Vc3S01_RS27010 PF02378 Phosphotransferase system, EIIC Vc3S01_RS27010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Vc3S01_RS27015 PF00128 Alpha amylase, catalytic domain Vc3S01_RS27020 PF01074 Glycosyl hydrolases family 38 N-terminal domain Vc3S01_RS27020 PF07748 Glycosyl hydrolases family 38 C-terminal domain Vc3S01_RS27020 PF09261 Alpha mannosidase middle domain Vc3S01_RS27025 PF02378 Phosphotransferase system, EIIC Vc3S01_RS27030 PF01380 SIS domain Vc3S01_RS27030 PF01418 Helix-turn-helix domain, rpiR family Vc3S01_RS27050 PF05193 Peptidase M16 inactive domain Vc3S01_RS27050 PF00675 Insulinase (Peptidase family M16) Vc3S01_RS27055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS27055 PF02743 Cache domain Vc3S01_RS27055 PF00672 HAMP domain Vc3S01_RS27065 PF16325 Peptidase family U32 C-terminal domain Vc3S01_RS27065 PF01136 Peptidase family U32 Vc3S01_RS27090 PF00535 Glycosyl transferase family 2 Vc3S01_RS27105 PF00857 Isochorismatase family Vc3S01_RS27110 PF00005 ABC transporter Vc3S01_RS27115 PF02687 FtsX-like permease family Vc3S01_RS27115 PF12704 MacB-like periplasmic core domain Vc3S01_RS27150 PF02566 OsmC-like protein Vc3S01_RS27155 PF01047 MarR family Vc3S01_RS27160 PF10417 C-terminal domain of 1-Cys peroxiredoxin Vc3S01_RS27160 PF00578 AhpC/TSA family Vc3S01_RS27165 PF07992 Pyridine nucleotide-disulphide oxidoreductase Vc3S01_RS27165 PF13192 Thioredoxin domain Vc3S01_RS27230 PF02447 GntP family permease Vc3S01_RS27235 PF01261 Xylose isomerase-like TIM barrel Vc3S01_RS27240 PF00596 Class II Aldolase and Adducin N-terminal domain Vc3S01_RS27245 PF07005 Sugar-binding N-terminal domain Vc3S01_RS27245 PF17042 Nucleotide-binding C-terminal domain Vc3S01_RS27250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Vc3S01_RS27250 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Vc3S01_RS27255 PF08220 DeoR-like helix-turn-helix domain Vc3S01_RS27255 PF00455 DeoR C terminal sensor domain Vc3S01_RS27265 PF02743 Cache domain Vc3S01_RS27265 PF00672 HAMP domain Vc3S01_RS27265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain Vc3S01_RS27270 PF03466 LysR substrate binding domain Vc3S01_RS27270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS27275 PF11975 Family 4 glycosyl hydrolase C-terminal domain Vc3S01_RS27275 PF02056 Family 4 glycosyl hydrolase Vc3S01_RS27285 PF01810 LysE type translocator Vc3S01_RS27290 PF01037 Lrp/AsnC ligand binding domain Vc3S01_RS27290 PF13404 AsnC-type helix-turn-helix domain Vc3S01_RS27300 PF12833 Helix-turn-helix domain Vc3S01_RS27310 PF03475 3-alpha domain Vc3S01_RS27310 PF03473 MOSC domain Vc3S01_RS27315 PF13673 Acetyltransferase (GNAT) domain Vc3S01_RS27325 PF06629 MltA-interacting protein MipA Vc3S01_RS27330 PF00271 Helicase conserved C-terminal domain Vc3S01_RS27330 PF00270 DEAD/DEAH box helicase Vc3S01_RS27345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS27345 PF03466 LysR substrate binding domain Vc3S01_RS27350 PF03786 D-mannonate dehydratase (UxuA) Vc3S01_RS27355 PF00392 Bacterial regulatory proteins, gntR family Vc3S01_RS27355 PF07729 FCD domain Vc3S01_RS27360 PF03480 Bacterial extracellular solute-binding protein, family 7 Vc3S01_RS27365 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Vc3S01_RS27370 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Vc3S01_RS27375 PF01232 Mannitol dehydrogenase Rossmann domain Vc3S01_RS27375 PF08125 Mannitol dehydrogenase C-terminal domain Vc3S01_RS27380 PF02614 Glucuronate isomerase Vc3S01_RS27385 PF00294 pfkB family carbohydrate kinase Vc3S01_RS27390 PF01081 KDPG and KHG aldolase Vc3S01_RS27395 PF10688 Bacterial inner membrane protein Vc3S01_RS27400 PF00933 Glycosyl hydrolase family 3 N terminal domain Vc3S01_RS27420 PF01476 LysM domain Vc3S01_RS27420 PF07979 Intimin C-type lectin domain Vc3S01_RS27420 PF11924 Inverse autotransporter, beta-domain Vc3S01_RS27420 PF02369 Bacterial Ig-like domain (group 1) Vc3S01_RS27420 PF02368 Bacterial Ig-like domain (group 2) Vc3S01_RS27430 PF00005 ABC transporter Vc3S01_RS27430 PF00664 ABC transporter transmembrane region Vc3S01_RS27440 PF01037 Lrp/AsnC ligand binding domain Vc3S01_RS27480 PF00474 Sodium:solute symporter family Vc3S01_RS27490 PF14850 DNA-binding domain of Proline dehydrogenase Vc3S01_RS27490 PF01619 Proline dehydrogenase Vc3S01_RS27490 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Vc3S01_RS27490 PF00171 Aldehyde dehydrogenase family Vc3S01_RS27495 PF12833 Helix-turn-helix domain Vc3S01_RS27505 PF01243 Pyridoxamine 5'-phosphate oxidase Vc3S01_RS27505 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Vc3S01_RS27510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Vc3S01_RS27510 PF00512 His Kinase A (phospho-acceptor) domain Vc3S01_RS27510 PF02743 Cache domain Vc3S01_RS27515 PF00072 Response regulator receiver domain Vc3S01_RS27515 PF00158 Sigma-54 interaction domain Vc3S01_RS27515 PF02954 Bacterial regulatory protein, Fis family Vc3S01_RS27520 PF00529 HlyD membrane-fusion protein of T1SS Vc3S01_RS27535 PF00664 ABC transporter transmembrane region Vc3S01_RS27535 PF00005 ABC transporter Vc3S01_RS27535 PF03412 Peptidase C39 family Vc3S01_RS27565 PF03358 NADPH-dependent FMN reductase Vc3S01_RS27570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Vc3S01_RS27575 PF00246 Zinc carboxypeptidase Vc3S01_RS27580 PF01418 Helix-turn-helix domain, rpiR family Vc3S01_RS27580 PF01380 SIS domain Vc3S01_RS27585 PF01380 SIS domain Vc3S01_RS27590 PF00367 phosphotransferase system, EIIB Vc3S01_RS27590 PF02378 Phosphotransferase system, EIIC Vc3S01_RS27595 PF00267 Gram-negative porin Vc3S01_RS27605 PF03466 LysR substrate binding domain Vc3S01_RS27605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS27610 PF00132 Bacterial transferase hexapeptide (six repeats) Vc3S01_RS27620 PF13718 GNAT acetyltransferase 2 Vc3S01_RS27620 PF05127 Helicase Vc3S01_RS27625 PF02195 ParB-like nuclease domain Vc3S01_RS27625 PF08775 ParB family Vc3S01_RS27645 PF04754 Putative transposase, YhgA-like Vc3S01_RS27650 PF13614 AAA domain Vc3S01_RS27675 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system Vc3S01_RS27700 PF13737 Transposase DDE domain Vc3S01_RS27725 PF13737 Transposase DDE domain Vc3S01_RS27735 PF13737 Transposase DDE domain Vc3S01_RS27740 PF07669 Eco57I restriction-modification methylase Vc3S01_RS27740 PF02384 N-6 DNA Methylase Vc3S01_RS27765 PF01848 Hok/gef family Vc3S01_RS27795 PF08401 Domain of unknown function (DUF1738) Vc3S01_RS27795 PF18818 Metallopeptidase superfamily domain Vc3S01_RS27795 PF13362 Toprim domain Vc3S01_RS27830 PF01751 Toprim domain Vc3S01_RS27830 PF01131 DNA topoisomerase Vc3S01_RS27890 PF01464 Transglycosylase SLT domain Vc3S01_RS27895 PF10502 Signal peptidase, peptidase S26 Vc3S01_RS27915 PF01848 Hok/gef family Vc3S01_RS27960 PF00437 Type II/IV secretion system protein Vc3S01_RS27985 PF03743 Bacterial conjugation TrbI-like protein Vc3S01_RS27995 PF03524 Conjugal transfer protein Vc3S01_RS28010 PF00437 Type II/IV secretion system protein Vc3S01_RS28020 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Vc3S01_RS28025 PF05101 Type IV secretory pathway, VirB3-like protein Vc3S01_RS28030 PF04956 TrbC/VIRB2 family Vc3S01_RS28050 PF01555 DNA methylase Vc3S01_RS28065 PF14319 Transposase zinc-binding domain Vc3S01_RS28065 PF04986 Putative transposase Vc3S01_RS28070 PF00589 Phage integrase family Vc3S01_RS28070 PF13495 Phage integrase, N-terminal SAM-like domain Vc3S01_RS28155 PF13361 UvrD-like helicase C-terminal domain Vc3S01_RS28155 PF00580 UvrD/REP helicase N-terminal domain Vc3S01_RS28165 PF01396 Topoisomerase DNA binding C4 zinc finger Vc3S01_RS28165 PF13342 C-terminal repeat of topoisomerase Vc3S01_RS28165 PF01751 Toprim domain Vc3S01_RS28165 PF01131 DNA topoisomerase Vc3S01_RS28245 PF00154 recA bacterial DNA recombination protein Vc3S01_RS28295 PF13614 AAA domain Vc3S01_RS28355 PF01051 Initiator Replication protein Vc3S01_RS28655 PF00437 Type II/IV secretion system protein Vc3S01_RS28685 PF00437 Type II/IV secretion system protein Vc3S01_RS28790 PF00809 Pterin binding enzyme Vc3S01_RS28795 PF01636 Phosphotransferase enzyme family Vc3S01_RS28800 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase Vc3S01_RS28815 PF07690 Major Facilitator Superfamily Vc3S01_RS28820 PF02909 Tetracyclin repressor-like, C-terminal domain Vc3S01_RS28820 PF00440 Bacterial regulatory proteins, tetR family Vc3S01_RS28825 PF00376 MerR family regulatory protein Vc3S01_RS28825 PF09278 MerR, DNA binding Vc3S01_RS28830 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase Vc3S01_RS28840 PF03466 LysR substrate binding domain Vc3S01_RS28840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Vc3S01_RS28845 PF07690 Major Facilitator Superfamily Vc3S01_RS28860 PF01751 Toprim domain Vc3S01_RS28860 PF01131 DNA topoisomerase Vc3S01_RS28865 PF00186 Dihydrofolate reductase Vc3S01_RS28900 PF06508 Queuosine biosynthesis protein QueC Vc3S01_RS29005 PF10124 Mu-like prophage major head subunit gpT Vc3S01_RS29140 PF00563 EAL domain Vc3S01_RS29140 PF12792 CSS motif domain associated with EAL Vc3S01_RS29200 PF02796 Helix-turn-helix domain of resolvase Vc3S01_RS29200 PF00239 Resolvase, N terminal domain Vc3S01_RS29220 PF02796 Helix-turn-helix domain of resolvase Vc3S01_RS29220 PF00239 Resolvase, N terminal domain Vc3S01_RS29255 PF16868 NMT1-like family Vc3S01_RS29280 PF04170 NlpE N-terminal domain Vc3S01_RS29280 PF17185 NlpE C-terminal OB domain Vc3S01_RS29305 PF00239 Resolvase, N terminal domain Vc3S01_RS29305 PF02796 Helix-turn-helix domain of resolvase Vc3S01_RS29310 PF00239 Resolvase, N terminal domain Vc3S01_RS29310 PF02796 Helix-turn-helix domain of resolvase Vc3S01_RS29350 PF00239 Resolvase, N terminal domain Vc3S01_RS29350 PF02796 Helix-turn-helix domain of resolvase Vc3S01_RS29355 PF02631 RecX family Vc3S01_RS29380 PF00872 Transposase, Mutator family Vc3S01_RS29390 PF18807 Tripartite Tc toxins repeat Vc3S01_RS29390 PF14431 YwqJ-like deaminase Vc3S01_RS29395 PF03534 Salmonella virulence plasmid 65kDa B protein Vc3S01_RS29395 PF12255 Insecticide toxin TcdB middle/C-terminal region Vc3S01_RS29395 PF12256 Insecticide toxin TcdB middle/N-terminal region Vc3S01_RS29400 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain Vc3S01_RS29400 PF18413 Neuraminidase-like domain Vc3S01_RS29410 PF01420 Type I restriction modification DNA specificity domain Vc3S01_RS29415 PF12161 HsdM N-terminal domain Vc3S01_RS29415 PF02384 N-6 DNA Methylase Vc3S01_RS29440 PF01848 Hok/gef family Vc3S01_RS29465 PF02796 Helix-turn-helix domain of resolvase Vc3S01_RS29465 PF00239 Resolvase, N terminal domain Vc3S01_RS29550 PF18821 Large polyvalent protein-associated domain 7 Vc3S01_RS29550 PF03432 Relaxase/Mobilisation nuclease domain Vc3S01_RS29560 PF01131 DNA topoisomerase Vc3S01_RS29560 PF01751 Toprim domain Vc3S01_RS29570 PF02534 Type IV secretory system Conjugative DNA transfer Vc3S01_RS29575 PF00437 Type II/IV secretion system protein Vc3S01_RS29580 PF03743 Bacterial conjugation TrbI-like protein Vc3S01_RS29585 PF03524 Conjugal transfer protein Vc3S01_RS29590 PF04335 VirB8 protein Vc3S01_RS29610 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Vc3S01_RS29715 PF04986 Putative transposase Vc3S01_RS29715 PF14319 Transposase zinc-binding domain Vc3S01_RS29730 PF18607 ParA helix turn helix domain Vc3S01_RS29730 PF13614 AAA domain Vc3S01_RS29755 PF04226 Transglycosylase associated protein Vc3S01_RS29845 PF00437 Type II/IV secretion system protein Vc3S01_RS29890 PF13614 AAA domain Vc3S01_RS29945 PF05732 Firmicute plasmid replication protein (RepL) Vc3S01_RS29950 PF05154 TM2 domain Vc3S01_RS29995 PF00684 DnaJ central domain Vc3S01_RS29995 PF01556 DnaJ C terminal domain Vc3S01_RS29995 PF00226 DnaJ domain Vc3S01_RS30140 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system Vc3S01_RS30240 PF01131 DNA topoisomerase Vc3S01_RS30240 PF01751 Toprim domain Vc3S01_RS30265 PF02534 Type IV secretory system Conjugative DNA transfer Vc3S01_RS30270 PF00437 Type II/IV secretion system protein Vc3S01_RS30275 PF03743 Bacterial conjugation TrbI-like protein Vc3S01_RS30280 PF03524 Conjugal transfer protein Vc3S01_RS30285 PF04335 VirB8 protein Vc3S01_RS30300 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Vc3S01_RS30315 PF01464 Transglycosylase SLT domain Vc3S01_RS30330 PF00436 Single-strand binding protein family Vc3S01_RS30335 PF01478 Type IV leader peptidase family Vc3S01_RS30335 PF06750 Bacterial Peptidase A24 N-terminal domain