locus-tag class description M892_RS00010 PF03480 Bacterial extracellular solute-binding protein, family 7 M892_RS00020 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M892_RS00025 PF17200 Single Cache domain 2 M892_RS00025 PF07730 Histidine kinase M892_RS00030 PF13358 DDE superfamily endonuclease M892_RS00045 PF13358 DDE superfamily endonuclease M892_RS00050 PF03280 Proteobacterial lipase chaperone protein M892_RS00055 PF00561 alpha/beta hydrolase fold M892_RS00060 PF01053 Cys/Met metabolism PLP-dependent enzyme M892_RS00065 PF13396 Phospholipase_D-nuclease N-terminal M892_RS00065 PF13091 PLD-like domain M892_RS00070 PF00209 Sodium:neurotransmitter symporter family M892_RS00075 PF12729 Four helix bundle sensory module for signal transduction M892_RS00075 PF00672 HAMP domain M892_RS00075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS00080 PF00849 RNA pseudouridylate synthase M892_RS00090 PF13358 DDE superfamily endonuclease M892_RS00095 PF03063 Prismane/CO dehydrogenase family M892_RS00100 PF01590 GAF domain M892_RS00100 PF00158 Sigma-54 interaction domain M892_RS00110 PF07690 Major Facilitator Superfamily M892_RS00120 PF01066 CDP-alcohol phosphatidyltransferase M892_RS00125 PF00005 ABC transporter M892_RS00130 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS00135 PF13416 Bacterial extracellular solute-binding protein M892_RS00140 PF09335 SNARE associated Golgi protein M892_RS00165 PF00072 Response regulator receiver domain M892_RS00165 PF00196 Bacterial regulatory proteins, luxR family M892_RS00175 PF00916 Sulfate permease family M892_RS00175 PF01740 STAS domain M892_RS00185 PF06945 Protein of unknown function (DUF1289) M892_RS00195 PF02872 5'-nucleotidase, C-terminal domain M892_RS00195 PF00149 Calcineurin-like phosphoesterase M892_RS00210 PF01386 Ribosomal L25p family M892_RS00215 PF00535 Glycosyl transferase family 2 M892_RS00215 PF02709 N-terminal domain of galactosyltransferase M892_RS00225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS00230 PF00072 Response regulator receiver domain M892_RS00230 PF00486 Transcriptional regulatory protein, C terminal M892_RS00240 PF04851 Type III restriction enzyme, res subunit M892_RS00240 PF00271 Helicase conserved C-terminal domain M892_RS00245 PF01479 S4 domain M892_RS00245 PF00849 RNA pseudouridylate synthase M892_RS00250 PF07690 Major Facilitator Superfamily M892_RS00260 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS00265 PF11066 Protein of unknown function (DUF2867) M892_RS00265 PF13460 NAD(P)H-binding M892_RS00270 PF01554 MatE M892_RS00275 PF00005 ABC transporter M892_RS00290 PF06965 Na+/H+ antiporter 1 M892_RS00300 PF13817 IS66 C-terminal element M892_RS00300 PF13007 Transposase C of IS166 homeodomain M892_RS00300 PF03050 Transposase IS66 family M892_RS00300 PF13005 zinc-finger binding domain of transposase IS66 M892_RS00325 PF16295 Tetracyclin repressor-like, C-terminal domain M892_RS00325 PF00440 Bacterial regulatory proteins, tetR family M892_RS00330 PF02770 Acyl-CoA dehydrogenase, middle domain M892_RS00330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M892_RS00330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M892_RS00330 PF09317 Domain of unknown function (DUF1974) M892_RS00335 PF12241 Trans-2-enoyl-CoA reductase catalytic region M892_RS00335 PF07055 Enoyl reductase FAD binding domain M892_RS00335 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase M892_RS00340 PF06826 Predicted Permease Membrane Region M892_RS00340 PF02080 TrkA-C domain M892_RS00345 PF00462 Glutaredoxin M892_RS00355 PF01418 Helix-turn-helix domain, rpiR family M892_RS00355 PF01380 SIS domain M892_RS00360 PF00282 Pyridoxal-dependent decarboxylase conserved domain M892_RS00370 PF03956 Lysine exporter LysO M892_RS00380 PF04993 TfoX N-terminal domain M892_RS00380 PF04994 TfoX C-terminal domain M892_RS00395 PF00497 Bacterial extracellular solute-binding proteins, family 3 M892_RS00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS00395 PF00512 His Kinase A (phospho-acceptor) domain M892_RS00405 PF00266 Aminotransferase class-V M892_RS00420 PF08448 PAS fold M892_RS00420 PF00563 EAL domain M892_RS00420 PF08447 PAS fold M892_RS00420 PF00990 Diguanylate cyclase, GGDEF domain M892_RS00440 PF13340 Putative transposase of IS4/5 family (DUF4096) M892_RS00450 PF12792 CSS motif domain associated with EAL M892_RS00450 PF00563 EAL domain M892_RS00455 PF13340 Putative transposase of IS4/5 family (DUF4096) M892_RS00465 PF00291 Pyridoxal-phosphate dependent enzyme M892_RS00470 PF00664 ABC transporter transmembrane region M892_RS00470 PF00005 ABC transporter M892_RS00475 PF00664 ABC transporter transmembrane region M892_RS00475 PF00005 ABC transporter M892_RS00480 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS00485 PF13358 DDE superfamily endonuclease M892_RS00495 PF02371 Transposase IS116/IS110/IS902 family M892_RS00495 PF01548 Transposase M892_RS00535 PF01548 Transposase M892_RS00535 PF02371 Transposase IS116/IS110/IS902 family M892_RS00545 PF04229 GrpB protein M892_RS00550 PF13247 4Fe-4S dicluster domain M892_RS00560 PF00384 Molybdopterin oxidoreductase M892_RS00560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M892_RS00560 PF01568 Molydopterin dinucleotide binding domain M892_RS00565 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS00630 PF03575 Peptidase family S51 M892_RS00660 PF00474 Sodium:solute symporter family M892_RS00675 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component M892_RS00675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M892_RS00690 PF00356 Bacterial regulatory proteins, lacI family M892_RS00695 PF03328 HpcH/HpaI aldolase/citrate lyase family M892_RS00700 PF00815 Histidinol dehydrogenase M892_RS00715 PF00561 alpha/beta hydrolase fold M892_RS00730 PF13358 DDE superfamily endonuclease M892_RS00745 PF02954 Bacterial regulatory protein, Fis family M892_RS00745 PF00072 Response regulator receiver domain M892_RS00745 PF00158 Sigma-54 interaction domain M892_RS00750 PF00990 Diguanylate cyclase, GGDEF domain M892_RS00750 PF03707 Bacterial signalling protein N terminal repeat M892_RS00750 PF00563 EAL domain M892_RS00755 PF01966 HD domain M892_RS00755 PF11871 Domain of unknown function (DUF3391) M892_RS00760 PF01810 LysE type translocator M892_RS00765 PF11230 Protein of unknown function (DUF3029) M892_RS00770 PF04055 Radical SAM superfamily M892_RS00775 PF03466 LysR substrate binding domain M892_RS00775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS00780 PF03741 Integral membrane protein TerC family M892_RS00795 PF00106 short chain dehydrogenase M892_RS00800 PF00465 Iron-containing alcohol dehydrogenase M892_RS00805 PF03222 Tryptophan/tyrosine permease family M892_RS00825 PF00664 ABC transporter transmembrane region M892_RS00825 PF00005 ABC transporter M892_RS00830 PF00005 ABC transporter M892_RS00830 PF00664 ABC transporter transmembrane region M892_RS00835 PF07963 Prokaryotic N-terminal methylation motif M892_RS00850 PF00012 Hsp70 protein M892_RS00855 PF00012 Hsp70 protein M892_RS00865 PF00990 Diguanylate cyclase, GGDEF domain M892_RS00900 PF02868 Thermolysin metallopeptidase, alpha-helical domain M892_RS00900 PF07504 Fungalysin/Thermolysin Propeptide Motif M892_RS00900 PF04151 Bacterial pre-peptidase C-terminal domain M892_RS00900 PF03413 Peptidase propeptide and YPEB domain M892_RS00900 PF01447 Thermolysin metallopeptidase, catalytic domain M892_RS00910 PF00384 Molybdopterin oxidoreductase M892_RS00910 PF01568 Molydopterin dinucleotide binding domain M892_RS00910 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M892_RS00915 PF12800 4Fe-4S binding domain M892_RS00915 PF13247 4Fe-4S dicluster domain M892_RS00920 PF04976 DMSO reductase anchor subunit (DmsC) M892_RS00925 PF02613 Nitrate reductase delta subunit M892_RS00935 PF02525 Flavodoxin-like fold M892_RS00940 PF00270 DEAD/DEAH box helicase M892_RS00940 PF11898 Domain of unknown function (DUF3418) M892_RS00940 PF04408 Helicase associated domain (HA2) M892_RS00940 PF00271 Helicase conserved C-terminal domain M892_RS00940 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold M892_RS00985 PF04204 Homoserine O-succinyltransferase M892_RS00990 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS01010 PF00893 Small Multidrug Resistance protein M892_RS01015 PF13520 Amino acid permease M892_RS01020 PF01810 LysE type translocator M892_RS01025 PF03279 Bacterial lipid A biosynthesis acyltransferase M892_RS01030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M892_RS01050 PF02074 Carboxypeptidase Taq (M32) metallopeptidase M892_RS01055 PF01810 LysE type translocator M892_RS01065 PF01117 Aerolysin toxin M892_RS01065 PF03440 Aerolysin/Pertussis toxin (APT) domain M892_RS01070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M892_RS01075 PF03440 Aerolysin/Pertussis toxin (APT) domain M892_RS01075 PF01117 Aerolysin toxin M892_RS01090 PF01235 Sodium:alanine symporter family M892_RS01115 PF00884 Sulfatase M892_RS01120 PF13358 DDE superfamily endonuclease M892_RS01135 PF01406 tRNA synthetases class I (C) catalytic domain M892_RS01140 PF01554 MatE M892_RS01145 PF00571 CBS domain M892_RS01155 PF02028 BCCT, betaine/carnitine/choline family transporter M892_RS01160 PF00583 Acetyltransferase (GNAT) family M892_RS01165 PF00202 Aminotransferase class-III M892_RS01170 PF06339 Ectoine synthase M892_RS01175 PF13840 ACT domain M892_RS01175 PF00696 Amino acid kinase family M892_RS01185 PF00034 Cytochrome c M892_RS01185 PF03150 Di-haem cytochrome c peroxidase M892_RS01190 PF00082 Subtilase family M892_RS01190 PF04151 Bacterial pre-peptidase C-terminal domain M892_RS01190 PF05922 Peptidase inhibitor I9 M892_RS01195 PF02868 Thermolysin metallopeptidase, alpha-helical domain M892_RS01195 PF03413 Peptidase propeptide and YPEB domain M892_RS01195 PF01447 Thermolysin metallopeptidase, catalytic domain M892_RS01195 PF04151 Bacterial pre-peptidase C-terminal domain M892_RS01195 PF07504 Fungalysin/Thermolysin Propeptide Motif M892_RS01200 PF13737 Transposase DDE domain M892_RS01220 PF13007 Transposase C of IS166 homeodomain M892_RS01220 PF13817 IS66 C-terminal element M892_RS01220 PF03050 Transposase IS66 family M892_RS01220 PF13005 zinc-finger binding domain of transposase IS66 M892_RS01240 PF00665 Integrase core domain M892_RS01240 PF13333 Integrase core domain M892_RS01240 PF13276 HTH-like domain M892_RS01255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M892_RS01275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS01275 PF00989 PAS fold M892_RS01275 PF17203 Single cache domain 3 M892_RS01275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M892_RS01280 PF12431 Transcriptional regulator M892_RS01280 PF00072 Response regulator receiver domain M892_RS01285 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain M892_RS01285 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain M892_RS01290 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase M892_RS01295 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain M892_RS01295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase M892_RS01300 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS01315 PF02954 Bacterial regulatory protein, Fis family M892_RS01315 PF01590 GAF domain M892_RS01315 PF00158 Sigma-54 interaction domain M892_RS01320 PF00171 Aldehyde dehydrogenase family M892_RS01325 PF16868 NMT1-like family M892_RS01330 PF02743 Cache domain M892_RS01330 PF00672 HAMP domain M892_RS01330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS01335 PF01925 Sulfite exporter TauE/SafE M892_RS01340 PF01970 Tripartite tricarboxylate transporter TctA family M892_RS01360 PF13276 HTH-like domain M892_RS01360 PF13333 Integrase core domain M892_RS01360 PF00665 Integrase core domain M892_RS01435 PF00285 Citrate synthase, C-terminal domain M892_RS01440 PF00330 Aconitase family (aconitate hydratase) M892_RS01440 PF00694 Aconitase C-terminal domain M892_RS01445 PF04303 PrpF protein M892_RS01450 PF16177 Acetyl-coenzyme A synthetase N-terminus M892_RS01450 PF00501 AMP-binding enzyme M892_RS01450 PF13193 AMP-binding enzyme C-terminal domain M892_RS01460 PF00150 Cellulase (glycosyl hydrolase family 5) M892_RS01485 PF04055 Radical SAM superfamily M892_RS01490 PF06508 Queuosine biosynthesis protein QueC M892_RS01495 PF17158 Membrane-associated sensor, integral membrane domain M892_RS01495 PF00990 Diguanylate cyclase, GGDEF domain M892_RS01520 PF03050 Transposase IS66 family M892_RS01520 PF13005 zinc-finger binding domain of transposase IS66 M892_RS01520 PF13007 Transposase C of IS166 homeodomain M892_RS01520 PF13817 IS66 C-terminal element M892_RS01535 PF00691 OmpA family M892_RS01535 PF05736 OprF membrane domain M892_RS01550 PF10672 S-adenosylmethionine-dependent methyltransferase M892_RS01550 PF17785 PUA-like domain M892_RS01570 PF04358 DsrC like protein M892_RS01575 PF01027 Inhibitor of apoptosis-promoting Bax1 M892_RS01580 PF00005 ABC transporter M892_RS01590 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS01595 PF00497 Bacterial extracellular solute-binding proteins, family 3 M892_RS01600 PF10414 Sirohaem synthase dimerisation region M892_RS01600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M892_RS01600 PF14824 Sirohaem biosynthesis protein central M892_RS01605 PF04461 Protein of unknown function (DUF520) M892_RS01610 PF00793 DAHP synthetase I family M892_RS01630 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF M892_RS01630 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF M892_RS01630 PF01189 16S rRNA methyltransferase RsmB/F M892_RS01635 PF02470 MlaD protein M892_RS01640 PF04403 Paraquat-inducible protein A M892_RS01650 PF13185 GAF domain M892_RS01655 PF04352 ProQ/FINO family M892_RS01655 PF17516 ProQ C-terminal domain M892_RS01660 PF17804 Tail specific protease N-terminal domain M892_RS01660 PF03572 Peptidase family S41 M892_RS01660 PF00595 PDZ domain M892_RS01660 PF11818 C-terminal domain of tail specific protease (DUF3340) M892_RS01670 PF11940 Domain of unknown function (DUF3458) Ig-like fold M892_RS01670 PF17432 Domain of unknown function (DUF3458_C) ARM repeats M892_RS01670 PF01433 Peptidase family M1 domain M892_RS01680 PF05088 Bacterial NAD-glutamate dehydrogenase M892_RS01690 PF01695 IstB-like ATP binding protein M892_RS01695 PF02281 Transposase Tn5 dimerisation domain M892_RS01695 PF14706 Transposase DNA-binding M892_RS01695 PF01609 Transposase DDE domain M892_RS01700 PF01180 Dihydroorotate dehydrogenase M892_RS01705 PF07126 Cell-division protein ZapC M892_RS01710 PF10672 S-adenosylmethionine-dependent methyltransferase M892_RS01710 PF02926 THUMP domain M892_RS01710 PF01170 Putative RNA methylase family UPF0020 M892_RS01720 PF00005 ABC transporter M892_RS01720 PF16326 ABC transporter C-terminal domain M892_RS01720 PF12848 ABC transporter M892_RS01730 PF07977 FabA-like domain M892_RS01740 PF17414 MatP C-terminal ribbon-helix-helix domain M892_RS01740 PF06303 MatP N-terminal domain M892_RS01755 PF13276 HTH-like domain M892_RS01755 PF13333 Integrase core domain M892_RS01755 PF00665 Integrase core domain M892_RS01845 PF00072 Response regulator receiver domain M892_RS01845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS01845 PF09308 LuxQ, periplasmic M892_RS01845 PF00512 His Kinase A (phospho-acceptor) domain M892_RS01860 PF00115 Cytochrome C and Quinol oxidase polypeptide I M892_RS01875 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP M892_RS01875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M892_RS01900 PF13545 Crp-like helix-turn-helix domain M892_RS01900 PF00027 Cyclic nucleotide-binding domain M892_RS01905 PF00582 Universal stress protein family M892_RS01910 PF01171 PP-loop family M892_RS01935 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS01940 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS01945 PF13416 Bacterial extracellular solute-binding protein M892_RS01955 PF02146 Sir2 family M892_RS01975 PF13247 4Fe-4S dicluster domain M892_RS01980 PF04879 Molybdopterin oxidoreductase Fe4S4 domain M892_RS01980 PF01568 Molydopterin dinucleotide binding domain M892_RS01980 PF00384 Molybdopterin oxidoreductase M892_RS01990 PF02613 Nitrate reductase delta subunit M892_RS02010 PF02634 FdhD/NarQ family M892_RS02020 PF12848 ABC transporter M892_RS02020 PF00005 ABC transporter M892_RS02035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS02035 PF00512 His Kinase A (phospho-acceptor) domain M892_RS02040 PF00158 Sigma-54 interaction domain M892_RS02040 PF00072 Response regulator receiver domain M892_RS02040 PF02954 Bacterial regulatory protein, Fis family M892_RS02045 PF12849 PBP superfamily domain M892_RS02050 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS02055 PF08402 TOBE domain M892_RS02055 PF00005 ABC transporter M892_RS02060 PF12804 MobA-like NTP transferase domain M892_RS02065 PF03453 MoeA N-terminal region (domain I and II) M892_RS02065 PF00994 Probable molybdopterin binding domain M892_RS02065 PF03454 MoeA C-terminal region (domain IV) M892_RS02080 PF00480 ROK family M892_RS02085 PF03942 DTW domain M892_RS02125 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS02140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS02140 PF00672 HAMP domain M892_RS02140 PF12729 Four helix bundle sensory module for signal transduction M892_RS02145 PF00877 NlpC/P60 family M892_RS02155 PF00990 Diguanylate cyclase, GGDEF domain M892_RS02155 PF05230 MASE2 domain M892_RS02160 PF00072 Response regulator receiver domain M892_RS02160 PF01339 CheB methylesterase M892_RS02175 PF00677 Lumazine binding domain M892_RS02180 PF01554 MatE M892_RS02195 PF01740 STAS domain M892_RS02200 PF00691 OmpA family M892_RS02205 PF02563 Polysaccharide biosynthesis/export protein M892_RS02205 PF10531 SLBB domain M892_RS02220 PF00072 Response regulator receiver domain M892_RS02220 PF00158 Sigma-54 interaction domain M892_RS02220 PF02954 Bacterial regulatory protein, Fis family M892_RS02225 PF00534 Glycosyl transferases group 1 M892_RS02225 PF13439 Glycosyltransferase Family 4 M892_RS02230 PF00534 Glycosyl transferases group 1 M892_RS02260 PF13439 Glycosyltransferase Family 4 M892_RS02260 PF00534 Glycosyl transferases group 1 M892_RS02270 PF02397 Bacterial sugar transferase M892_RS02295 PF13188 PAS domain M892_RS02295 PF00563 EAL domain M892_RS02295 PF03707 Bacterial signalling protein N terminal repeat M892_RS02295 PF00990 Diguanylate cyclase, GGDEF domain M892_RS02300 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M892_RS02300 PF00072 Response regulator receiver domain M892_RS02300 PF00672 HAMP domain M892_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS02300 PF01627 Hpt domain M892_RS02300 PF00512 His Kinase A (phospho-acceptor) domain M892_RS02320 PF12464 Maltose acetyltransferase M892_RS02320 PF00132 Bacterial transferase hexapeptide (six repeats) M892_RS02325 PF00072 Response regulator receiver domain M892_RS02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS02325 PF00512 His Kinase A (phospho-acceptor) domain M892_RS02325 PF09308 LuxQ, periplasmic M892_RS02335 PF01928 CYTH domain M892_RS02350 PF01047 MarR family M892_RS02365 PF03729 Short repeat of unknown function (DUF308) M892_RS02370 PF00924 Mechanosensitive ion channel M892_RS02390 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family M892_RS02395 PF13673 Acetyltransferase (GNAT) domain M892_RS02410 PF02281 Transposase Tn5 dimerisation domain M892_RS02410 PF14706 Transposase DNA-binding M892_RS02410 PF01609 Transposase DDE domain M892_RS02450 PF14497 Glutathione S-transferase, C-terminal domain M892_RS02450 PF02798 Glutathione S-transferase, N-terminal domain M892_RS02460 PF04209 homogentisate 1,2-dioxygenase M892_RS02465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M892_RS02475 PF13358 DDE superfamily endonuclease M892_RS02480 PF07687 Peptidase dimerisation domain M892_RS02480 PF01546 Peptidase family M20/M25/M40 M892_RS02495 PF13358 DDE superfamily endonuclease M892_RS02505 PF00041 Fibronectin type III domain M892_RS02505 PF12561 ToxR activated gene A lipoprotein domain M892_RS02540 PF01593 Flavin containing amine oxidoreductase M892_RS02545 PF00348 Polyprenyl synthetase M892_RS02550 PF01036 Bacteriorhodopsin-like protein M892_RS02555 PF13737 Transposase DDE domain M892_RS02565 PF13358 DDE superfamily endonuclease M892_RS02580 PF13737 Transposase DDE domain M892_RS02610 PF05971 RNA methyltransferase M892_RS02615 PF01863 Protein of unknown function DUF45 M892_RS02625 PF13005 zinc-finger binding domain of transposase IS66 M892_RS02625 PF13817 IS66 C-terminal element M892_RS02625 PF03050 Transposase IS66 family M892_RS02625 PF13007 Transposase C of IS166 homeodomain M892_RS02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS02640 PF03466 LysR substrate binding domain M892_RS02645 PF07690 Major Facilitator Superfamily M892_RS02665 PF13358 DDE superfamily endonuclease M892_RS02670 PF00005 ABC transporter M892_RS02675 PF01032 FecCD transport family M892_RS02680 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family M892_RS02690 PF00300 Histidine phosphatase superfamily (branch 1) M892_RS02695 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase M892_RS02700 PF02654 Cobalamin-5-phosphate synthase M892_RS02705 PF02277 Phosphoribosyltransferase M892_RS02715 PF13460 NAD(P)H-binding M892_RS02720 PF00375 Sodium:dicarboxylate symporter family M892_RS02730 PF00929 Exonuclease M892_RS02730 PF08411 Exonuclease C-terminal M892_RS02735 PF03788 LrgA family M892_RS02740 PF04172 LrgB-like family M892_RS02745 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region M892_RS02745 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M892_RS02750 PF02222 ATP-grasp domain M892_RS02755 PF05724 Thiopurine S-methyltransferase (TPMT) M892_RS02765 PF00216 Bacterial DNA-binding protein M892_RS02785 PF01032 FecCD transport family M892_RS02790 PF01032 FecCD transport family M892_RS02795 PF01497 Periplasmic binding protein M892_RS02800 PF07715 TonB-dependent Receptor Plug Domain M892_RS02800 PF00593 TonB dependent receptor M892_RS02805 PF00501 AMP-binding enzyme M892_RS02805 PF13193 AMP-binding enzyme C-terminal domain M892_RS02805 PF00668 Condensation domain M892_RS02815 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) M892_RS02820 PF00668 Condensation domain M892_RS02820 PF00550 Phosphopantetheine attachment site M892_RS02820 PF00501 AMP-binding enzyme M892_RS02825 PF00282 Pyridoxal-dependent decarboxylase conserved domain M892_RS02830 PF00664 ABC transporter transmembrane region M892_RS02830 PF00005 ABC transporter M892_RS02830 PF08021 Siderophore-interacting FAD-binding domain M892_RS02830 PF04954 Siderophore-interacting protein M892_RS02835 PF00005 ABC transporter M892_RS02840 PF00550 Phosphopantetheine attachment site M892_RS02840 PF00857 Isochorismatase family M892_RS02855 PF13007 Transposase C of IS166 homeodomain M892_RS02855 PF03050 Transposase IS66 family M892_RS02855 PF13817 IS66 C-terminal element M892_RS02855 PF13005 zinc-finger binding domain of transposase IS66 M892_RS02860 PF03147 Ferredoxin-fold anticodon binding domain M892_RS02860 PF03484 tRNA synthetase B5 domain M892_RS02860 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain M892_RS02860 PF03483 B3/4 domain M892_RS02860 PF01588 Putative tRNA binding domain M892_RS02865 PF01409 tRNA synthetases class II core domain (F) M892_RS02865 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain M892_RS02875 PF01906 Putative heavy-metal-binding M892_RS02885 PF01042 Endoribonuclease L-PSP M892_RS02905 PF03050 Transposase IS66 family M892_RS02905 PF13817 IS66 C-terminal element M892_RS02905 PF13007 Transposase C of IS166 homeodomain M892_RS02905 PF13005 zinc-finger binding domain of transposase IS66 M892_RS02910 PF00453 Ribosomal protein L20 M892_RS02915 PF01632 Ribosomal protein L35 M892_RS02920 PF00707 Translation initiation factor IF-3, C-terminal domain M892_RS02920 PF05198 Translation initiation factor IF-3, N-terminal domain M892_RS02925 PF02824 TGS domain M892_RS02925 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M892_RS02925 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M892_RS02925 PF03129 Anticodon binding domain M892_RS02940 PF07702 UTRA domain M892_RS02940 PF00392 Bacterial regulatory proteins, gntR family M892_RS02945 PF01979 Amidohydrolase family M892_RS02950 PF00491 Arginase family M892_RS02955 PF17392 Urocanase C-terminal domain M892_RS02955 PF01175 Urocanase Rossmann-like domain M892_RS02955 PF17391 Urocanase N-terminal domain M892_RS02960 PF00221 Aromatic amino acid lyase M892_RS02980 PF03496 ADP-ribosyltransferase exoenzyme M892_RS02985 PF03496 ADP-ribosyltransferase exoenzyme M892_RS03005 PF01565 FAD binding domain M892_RS03005 PF13183 4Fe-4S dicluster domain M892_RS03005 PF02913 FAD linked oxidases, C-terminal domain M892_RS03020 PF00691 OmpA family M892_RS03020 PF05736 OprF membrane domain M892_RS03060 PF13005 zinc-finger binding domain of transposase IS66 M892_RS03060 PF13007 Transposase C of IS166 homeodomain M892_RS03060 PF13817 IS66 C-terminal element M892_RS03060 PF03050 Transposase IS66 family M892_RS03120 PF01259 SAICAR synthetase M892_RS03125 PF16655 PhoD-like phosphatase, N-terminal domain M892_RS03125 PF09423 PhoD-like phosphatase M892_RS03135 PF02253 Phospholipase A1 M892_RS03140 PF00271 Helicase conserved C-terminal domain M892_RS03140 PF08482 ATP-dependent helicase C-terminal M892_RS03140 PF04408 Helicase associated domain (HA2) M892_RS03140 PF00270 DEAD/DEAH box helicase M892_RS03145 PF00390 Malic enzyme, N-terminal domain M892_RS03145 PF03949 Malic enzyme, NAD binding domain M892_RS03150 PF02698 DUF218 domain M892_RS03155 PF00939 Sodium:sulfate symporter transmembrane region M892_RS03160 PF00072 Response regulator receiver domain M892_RS03160 PF00990 Diguanylate cyclase, GGDEF domain M892_RS03175 PF00266 Aminotransferase class-V M892_RS03195 PF13358 DDE superfamily endonuclease M892_RS03215 PF13817 IS66 C-terminal element M892_RS03215 PF13007 Transposase C of IS166 homeodomain M892_RS03215 PF13005 zinc-finger binding domain of transposase IS66 M892_RS03215 PF03050 Transposase IS66 family M892_RS03235 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS03270 PF00589 Phage integrase family M892_RS03270 PF13495 Phage integrase, N-terminal SAM-like domain M892_RS03370 PF03864 Phage major capsid protein E M892_RS03380 PF01957 NfeD-like C-terminal, partner-binding M892_RS03380 PF01972 Serine dehydrogenase proteinase M892_RS03410 PF00959 Phage lysozyme M892_RS03465 PF06147 Protein of unknown function (DUF968) M892_RS03485 PF03354 Phage Terminase M892_RS03505 PF01381 Helix-turn-helix M892_RS03510 PF01381 Helix-turn-helix M892_RS03510 PF00717 Peptidase S24-like M892_RS03520 PF10065 Uncharacterized conserved protein (DUF2303) M892_RS03535 PF12167 Arm DNA-binding domain M892_RS03535 PF00589 Phage integrase family M892_RS03545 PF13276 HTH-like domain M892_RS03545 PF13333 Integrase core domain M892_RS03545 PF00665 Integrase core domain M892_RS03585 PF03050 Transposase IS66 family M892_RS03585 PF13005 zinc-finger binding domain of transposase IS66 M892_RS03585 PF13007 Transposase C of IS166 homeodomain M892_RS03585 PF13817 IS66 C-terminal element M892_RS03610 PF13005 zinc-finger binding domain of transposase IS66 M892_RS03610 PF03050 Transposase IS66 family M892_RS03610 PF13817 IS66 C-terminal element M892_RS03610 PF13007 Transposase C of IS166 homeodomain M892_RS03655 PF13302 Acetyltransferase (GNAT) domain M892_RS03660 PF00158 Sigma-54 interaction domain M892_RS03660 PF18024 Helix-turn-helix domain M892_RS03665 PF05128 Domain of unknown function (DUF697) M892_RS03670 PF04317 YcjX-like family, DUF463 M892_RS03685 PF00425 chorismate binding enzyme M892_RS03685 PF04715 Anthranilate synthase component I, N terminal region M892_RS03700 PF00293 NUDIX domain M892_RS03705 PF03222 Tryptophan/tyrosine permease family M892_RS03710 PF03313 Serine dehydratase alpha chain M892_RS03710 PF03315 Serine dehydratase beta chain M892_RS03715 PF13006 Insertion element 4 transposase N-terminal M892_RS03715 PF01609 Transposase DDE domain M892_RS03720 PF00990 Diguanylate cyclase, GGDEF domain M892_RS03720 PF00563 EAL domain M892_RS03720 PF03707 Bacterial signalling protein N terminal repeat M892_RS03730 PF00196 Bacterial regulatory proteins, luxR family M892_RS03730 PF00072 Response regulator receiver domain M892_RS03735 PF01242 6-pyruvoyl tetrahydropterin synthase M892_RS03745 PF00152 tRNA synthetases class II (D, K and N) M892_RS03745 PF01336 OB-fold nucleic acid binding domain M892_RS03760 PF00392 Bacterial regulatory proteins, gntR family M892_RS03760 PF00155 Aminotransferase class I and II M892_RS03775 PF00672 HAMP domain M892_RS03775 PF01966 HD domain M892_RS03780 PF00155 Aminotransferase class I and II M892_RS03800 PF00672 HAMP domain M892_RS03800 PF02743 Cache domain M892_RS03800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS03805 PF02028 BCCT, betaine/carnitine/choline family transporter M892_RS03810 PF01047 MarR family M892_RS03820 PF13358 DDE superfamily endonuclease M892_RS03830 PF03352 Methyladenine glycosylase M892_RS03835 PF00873 AcrB/AcrD/AcrF family M892_RS03840 PF13533 Biotin-lipoyl like M892_RS03845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M892_RS03850 PF04024 PspC domain M892_RS03855 PF06667 Phage shock protein B M892_RS03860 PF04012 PspA/IM30 family M892_RS03865 PF00158 Sigma-54 interaction domain M892_RS03865 PF02954 Bacterial regulatory protein, Fis family M892_RS03870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M892_RS03875 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS03880 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS03880 PF12911 N-terminal TM domain of oligopeptide transport permease C M892_RS03885 PF00005 ABC transporter M892_RS03885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M892_RS03890 PF00005 ABC transporter M892_RS03895 PF01609 Transposase DDE domain M892_RS03895 PF14706 Transposase DNA-binding M892_RS03895 PF02281 Transposase Tn5 dimerisation domain M892_RS03900 PF13276 HTH-like domain M892_RS03900 PF00665 Integrase core domain M892_RS03900 PF13333 Integrase core domain M892_RS03920 PF01368 DHH family M892_RS03920 PF02833 DHHA2 domain M892_RS03930 PF16875 Glycosyl hydrolase family 36 N-terminal domain M892_RS03930 PF16874 Glycosyl hydrolase family 36 C-terminal domain M892_RS03935 PF00384 Molybdopterin oxidoreductase M892_RS03935 PF18364 Molybdopterin oxidoreductase N-terminal domain M892_RS03935 PF01568 Molydopterin dinucleotide binding domain M892_RS03945 PF06796 Periplasmic nitrate reductase protein NapE M892_RS03950 PF03649 Uncharacterised protein family (UPF0014) M892_RS03955 PF01226 Formate/nitrite transporter M892_RS03980 PF02698 DUF218 domain M892_RS03985 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS04000 PF00265 Thymidine kinase M892_RS04005 PF09190 DALR domain M892_RS04005 PF01406 tRNA synthetases class I (C) catalytic domain M892_RS04010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M892_RS04015 PF00149 Calcineurin-like phosphoesterase M892_RS04020 PF00563 EAL domain M892_RS04020 PF08668 HDOD domain M892_RS04025 PF08668 HDOD domain M892_RS04025 PF00563 EAL domain M892_RS04030 PF02810 SEC-C motif M892_RS04035 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase M892_RS04035 PF01502 Phosphoribosyl-AMP cyclohydrolase M892_RS04040 PF00977 Histidine biosynthesis protein M892_RS04045 PF00977 Histidine biosynthesis protein M892_RS04050 PF00117 Glutamine amidotransferase class-I M892_RS04055 PF00475 Imidazoleglycerol-phosphate dehydratase M892_RS04055 PF08645 Polynucleotide kinase 3 phosphatase M892_RS04060 PF00155 Aminotransferase class I and II M892_RS04065 PF00815 Histidinol dehydrogenase M892_RS04070 PF08029 HisG, C-terminal domain M892_RS04070 PF01634 ATP phosphoribosyltransferase M892_RS04075 PF03553 Na+/H+ antiporter family M892_RS04080 PF00816 H-NS histone family M892_RS04085 PF00294 pfkB family carbohydrate kinase M892_RS04100 PF04356 Protein of unknown function (DUF489) M892_RS04105 PF00206 Lyase M892_RS04105 PF08328 Adenylosuccinate lyase C-terminal M892_RS04140 PF00106 short chain dehydrogenase M892_RS04150 PF01435 Peptidase family M48 M892_RS04155 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS04165 PF08241 Methyltransferase domain M892_RS04170 PF00155 Aminotransferase class I and II M892_RS04175 PF06968 Biotin and Thiamin Synthesis associated domain M892_RS04175 PF04055 Radical SAM superfamily M892_RS04180 PF00202 Aminotransferase class-III M892_RS04185 PF01258 Prokaryotic dksA/traR C4-type zinc finger M892_RS04205 PF13358 DDE superfamily endonuclease M892_RS04215 PF12002 MgsA AAA+ ATPase C terminal M892_RS04215 PF16193 AAA C-terminal domain M892_RS04215 PF00004 ATPase family associated with various cellular activities (AAA) M892_RS04220 PF03548 Outer membrane lipoprotein carrier protein LolA M892_RS04225 PF13491 4TM region of DNA translocase FtsK/SpoIIIE M892_RS04225 PF17854 FtsK alpha domain M892_RS04225 PF09397 Ftsk gamma domain M892_RS04225 PF01580 FtsK/SpoIIIE family M892_RS04230 PF01037 Lrp/AsnC ligand binding domain M892_RS04235 PF01262 Alanine dehydrogenase/PNT, C-terminal domain M892_RS04235 PF05222 Alanine dehydrogenase/PNT, N-terminal domain M892_RS04255 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) M892_RS04260 PF02371 Transposase IS116/IS110/IS902 family M892_RS04260 PF01548 Transposase M892_RS04275 PF01979 Amidohydrolase family M892_RS04280 PF08453 Peptidase family M9 N-terminal M892_RS04280 PF04151 Bacterial pre-peptidase C-terminal domain M892_RS04280 PF01752 Collagenase M892_RS04295 PF13005 zinc-finger binding domain of transposase IS66 M892_RS04295 PF13007 Transposase C of IS166 homeodomain M892_RS04295 PF13817 IS66 C-terminal element M892_RS04295 PF03050 Transposase IS66 family M892_RS04315 PF00145 C-5 cytosine-specific DNA methylase M892_RS04320 PF03372 Endonuclease/Exonuclease/phosphatase family M892_RS04335 PF00579 tRNA synthetases class I (W and Y) M892_RS04340 PF00141 Peroxidase M892_RS04355 PF13340 Putative transposase of IS4/5 family (DUF4096) M892_RS04370 PF00005 ABC transporter M892_RS04375 PF01032 FecCD transport family M892_RS04390 PF00593 TonB dependent receptor M892_RS04390 PF07715 TonB-dependent Receptor Plug Domain M892_RS04400 PF03606 C4-dicarboxylate anaerobic carrier M892_RS04405 PF01546 Peptidase family M20/M25/M40 M892_RS04405 PF07687 Peptidase dimerisation domain M892_RS04410 PF07729 FCD domain M892_RS04410 PF00392 Bacterial regulatory proteins, gntR family M892_RS04420 PF00873 AcrB/AcrD/AcrF family M892_RS04425 PF00529 HlyD membrane-fusion protein of T1SS M892_RS04425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M892_RS04430 PF02743 Cache domain M892_RS04430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS04430 PF00672 HAMP domain M892_RS04440 PF03831 PhnA domain M892_RS04440 PF08274 PhnA Zinc-Ribbon M892_RS04460 PF01609 Transposase DDE domain M892_RS04460 PF13006 Insertion element 4 transposase N-terminal M892_RS04480 PF05844 YopD protein M892_RS04490 PF07720 Tetratricopeptide repeat M892_RS04495 PF04792 V antigen (LcrV) protein M892_RS04505 PF09621 Type III secretion system regulator (LcrR) M892_RS04510 PF00771 FHIPEP family M892_RS04530 PF09059 TyeA M892_RS04535 PF07201 HrpJ-like domain M892_RS04540 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M892_RS04540 PF02874 ATP synthase alpha/beta family, beta-barrel domain M892_RS04540 PF18269 T3SS EscN ATPase C-terminal domain M892_RS04555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M892_RS04560 PF00813 FliP family M892_RS04565 PF01313 Bacterial export proteins, family 3 M892_RS04570 PF01311 Bacterial export proteins, family 1 M892_RS04575 PF01312 FlhB HrpN YscU SpaS Family M892_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS04580 PF03466 LysR substrate binding domain M892_RS04600 PF13358 DDE superfamily endonuclease M892_RS04610 PF13358 DDE superfamily endonuclease M892_RS04615 PF13358 DDE superfamily endonuclease M892_RS04620 PF02661 Fic/DOC family M892_RS04640 PF02108 Flagellar assembly protein FliH M892_RS04650 PF01514 Secretory protein of YscJ/FliF family M892_RS04655 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI M892_RS04670 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF M892_RS04685 PF03958 Bacterial type II/III secretion system short domain M892_RS04685 PF00263 Bacterial type II and III secretion system protein M892_RS04700 PF12833 Helix-turn-helix domain M892_RS04745 PF13006 Insertion element 4 transposase N-terminal M892_RS04745 PF01609 Transposase DDE domain M892_RS04785 PF00665 Integrase core domain M892_RS04790 PF01527 Transposase M892_RS04810 PF13737 Transposase DDE domain M892_RS04815 PF13808 DDE_Tnp_1-associated M892_RS04815 PF01609 Transposase DDE domain M892_RS04825 PF00665 Integrase core domain M892_RS04825 PF13333 Integrase core domain M892_RS04825 PF13276 HTH-like domain M892_RS04845 PF13737 Transposase DDE domain M892_RS04850 PF13358 DDE superfamily endonuclease M892_RS04865 PF03050 Transposase IS66 family M892_RS04865 PF13005 zinc-finger binding domain of transposase IS66 M892_RS04865 PF13007 Transposase C of IS166 homeodomain M892_RS04865 PF13817 IS66 C-terminal element M892_RS04910 PF13005 zinc-finger binding domain of transposase IS66 M892_RS04910 PF03050 Transposase IS66 family M892_RS04910 PF13007 Transposase C of IS166 homeodomain M892_RS04910 PF13817 IS66 C-terminal element M892_RS04915 PF13358 DDE superfamily endonuclease M892_RS04960 PF13193 AMP-binding enzyme C-terminal domain M892_RS04960 PF00501 AMP-binding enzyme M892_RS04960 PF16177 Acetyl-coenzyme A synthetase N-terminus M892_RS04965 PF06314 Acetoacetate decarboxylase (ADC) M892_RS04970 PF00871 Acetokinase family M892_RS04975 PF01515 Phosphate acetyl/butaryl transferase M892_RS04980 PF02803 Thiolase, C-terminal domain M892_RS04980 PF00108 Thiolase, N-terminal domain M892_RS04995 PF13007 Transposase C of IS166 homeodomain M892_RS04995 PF13005 zinc-finger binding domain of transposase IS66 M892_RS04995 PF13817 IS66 C-terminal element M892_RS04995 PF03050 Transposase IS66 family M892_RS05010 PF13356 Arm DNA-binding domain M892_RS05010 PF14659 Phage integrase, N-terminal SAM-like domain M892_RS05010 PF00589 Phage integrase family M892_RS05020 PF06610 L-alanine exporter M892_RS05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS05025 PF00512 His Kinase A (phospho-acceptor) domain M892_RS05025 PF09308 LuxQ, periplasmic M892_RS05025 PF00072 Response regulator receiver domain M892_RS05035 PF03738 Glutathionylspermidine synthase preATP-grasp M892_RS05045 PF03994 Domain of Unknown Function (DUF350) M892_RS05055 PF02445 Quinolinate synthetase A protein M892_RS05060 PF13174 Tetratricopeptide repeat M892_RS05060 PF16331 TolA binding protein trimerisation M892_RS05065 PF00691 OmpA family M892_RS05070 PF04052 TolB amino-terminal domain M892_RS05070 PF07676 WD40-like Beta Propeller Repeat M892_RS05080 PF02472 Biopolymer transport protein ExbD/TolR M892_RS05085 PF01618 MotA/TolQ/ExbB proton channel family M892_RS05090 PF03061 Thioesterase superfamily M892_RS05105 PF02322 Cytochrome bd terminal oxidase subunit II M892_RS05110 PF01654 Cytochrome bd terminal oxidase subunit I M892_RS05115 PF17864 RuvB AAA lid domain M892_RS05115 PF05491 RuvB C-terminal winged helix domain M892_RS05115 PF05496 Holliday junction DNA helicase RuvB P-loop domain M892_RS05120 PF07499 RuvA, C-terminal domain M892_RS05120 PF01330 RuvA N terminal domain M892_RS05125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS05125 PF00672 HAMP domain M892_RS05125 PF02203 Tar ligand binding domain homologue M892_RS05130 PF02075 Crossover junction endodeoxyribonuclease RuvC M892_RS05135 PF01336 OB-fold nucleic acid binding domain M892_RS05135 PF00152 tRNA synthetases class II (D, K and N) M892_RS05135 PF02938 GAD domain M892_RS05140 PF01904 Protein of unknown function DUF72 M892_RS05145 PF13649 Methyltransferase domain M892_RS05150 PF08003 Protein of unknown function (DUF1698) M892_RS05155 PF18030 RimK PreATP-grasp domain M892_RS05155 PF08443 RimK-like ATP-grasp domain M892_RS05170 PF16330 MukB hinge domain M892_RS05170 PF04310 MukB N-terminal M892_RS05175 PF04288 MukE-like family M892_RS05180 PF17192 MukF middle domain M892_RS05180 PF03882 MukF winged-helix domain M892_RS05180 PF17193 MukF C-terminal domain M892_RS05185 PF13847 Methyltransferase domain M892_RS05190 PF02698 DUF218 domain M892_RS05195 PF13006 Insertion element 4 transposase N-terminal M892_RS05195 PF01609 Transposase DDE domain M892_RS05200 PF00486 Transcriptional regulatory protein, C terminal M892_RS05200 PF00072 Response regulator receiver domain M892_RS05205 PF02613 Nitrate reductase delta subunit M892_RS05210 PF00356 Bacterial regulatory proteins, lacI family M892_RS05215 PF04993 TfoX N-terminal domain M892_RS05215 PF04994 TfoX C-terminal domain M892_RS05235 PF00534 Glycosyl transferases group 1 M892_RS05235 PF08323 Starch synthase catalytic domain M892_RS05240 PF00483 Nucleotidyl transferase M892_RS05245 PF08272 Topoisomerase I zinc-ribbon-like M892_RS05245 PF01131 DNA topoisomerase M892_RS05245 PF01751 Toprim domain M892_RS05245 PF01396 Topoisomerase DNA binding C4 zinc finger M892_RS05250 PF10692 Protein of unknown function (DUF2498) M892_RS05255 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M892_RS05265 PF03588 Leucyl/phenylalanyl-tRNA protein transferase M892_RS05270 PF04377 Arginine-tRNA-protein transferase, C terminus M892_RS05270 PF04376 Arginine-tRNA-protein transferase, N terminus M892_RS05275 PF01176 Translation initiation factor 1A / IF-1 M892_RS05280 PF02861 Clp amino terminal domain, pathogenicity island component M892_RS05280 PF17871 AAA lid domain M892_RS05280 PF10431 C-terminal, D2-small domain, of ClpB protein M892_RS05280 PF07724 AAA domain (Cdc48 subfamily) M892_RS05280 PF00004 ATPase family associated with various cellular activities (AAA) M892_RS05285 PF02617 ATP-dependent Clp protease adaptor protein ClpS M892_RS05290 PF00313 'Cold-shock' DNA-binding domain M892_RS05295 PF03971 Monomeric isocitrate dehydrogenase M892_RS05300 PF00849 RNA pseudouridylate synthase M892_RS05305 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M892_RS05315 PF13307 Helicase C-terminal domain M892_RS05315 PF06733 DEAD_2 M892_RS05320 PF01925 Sulfite exporter TauE/SafE M892_RS05325 PF07445 Primosomal replication protein priC M892_RS05330 PF10689 Protein of unknown function (DUF2496) M892_RS05335 PF03372 Endonuclease/Exonuclease/phosphatase family M892_RS05340 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS05345 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS05350 PF00497 Bacterial extracellular solute-binding proteins, family 3 M892_RS05355 PF00005 ABC transporter M892_RS05370 PF01228 Glycine radical M892_RS05370 PF02901 Pyruvate formate lyase-like M892_RS05380 PF04055 Radical SAM superfamily M892_RS05390 PF03887 YfbU domain M892_RS05395 PF08298 PrkA AAA domain M892_RS05395 PF06798 PrkA serine protein kinase C-terminal domain M892_RS05400 PF04285 Protein of unknown function (DUF444) M892_RS05405 PF04293 SpoVR like protein M892_RS05410 PF02348 Cytidylyltransferase M892_RS05415 PF03966 Trm112p-like protein M892_RS05420 PF02606 Tetraacyldisaccharide-1-P 4'-kinase M892_RS05425 PF00664 ABC transporter transmembrane region M892_RS05425 PF00005 ABC transporter M892_RS05430 PF13567 Domain of unknown function (DUF4131) M892_RS05430 PF03772 Competence protein M892_RS05430 PF00753 Metallo-beta-lactamase superfamily M892_RS05440 PF12704 MacB-like periplasmic core domain M892_RS05440 PF02687 FtsX-like permease family M892_RS05445 PF00005 ABC transporter M892_RS05450 PF12704 MacB-like periplasmic core domain M892_RS05450 PF02687 FtsX-like permease family M892_RS05460 PF00271 Helicase conserved C-terminal domain M892_RS05460 PF03461 TRCF domain M892_RS05460 PF00270 DEAD/DEAH box helicase M892_RS05460 PF02559 CarD-like/TRCF domain M892_RS05460 PF17757 UvrB interaction domain M892_RS05475 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS05480 PF05728 Uncharacterised protein family (UPF0227) M892_RS05490 PF08139 Prokaryotic membrane lipoprotein lipid attachment site M892_RS05490 PF13036 Peptidoglycan-synthase activator LpoB M892_RS05505 PF01230 HIT domain M892_RS05510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS05510 PF00672 HAMP domain M892_RS05520 PF01048 Phosphorylase superfamily M892_RS05525 PF00403 Heavy-metal-associated domain M892_RS05530 PF01554 MatE M892_RS05535 PF00478 IMP dehydrogenase / GMP reductase domain M892_RS05535 PF00571 CBS domain M892_RS05545 PF11953 Domain of unknown function (DUF3470) M892_RS05545 PF00037 4Fe-4S binding domain M892_RS05550 PF00588 SpoU rRNA Methylase family M892_RS05550 PF08032 RNA 2'-O ribose methyltransferase substrate binding M892_RS05570 PF13333 Integrase core domain M892_RS05570 PF00665 Integrase core domain M892_RS05570 PF13276 HTH-like domain M892_RS05600 PF02374 Anion-transporting ATPase M892_RS05605 PF06953 Arsenical resistance operon trans-acting repressor ArsD M892_RS05630 PF13005 zinc-finger binding domain of transposase IS66 M892_RS05630 PF03050 Transposase IS66 family M892_RS05630 PF13817 IS66 C-terminal element M892_RS05630 PF13007 Transposase C of IS166 homeodomain M892_RS05635 PF13817 IS66 C-terminal element M892_RS05635 PF13007 Transposase C of IS166 homeodomain M892_RS05635 PF13005 zinc-finger binding domain of transposase IS66 M892_RS05635 PF03050 Transposase IS66 family M892_RS05650 PF03050 Transposase IS66 family M892_RS05650 PF13005 zinc-finger binding domain of transposase IS66 M892_RS05650 PF13007 Transposase C of IS166 homeodomain M892_RS05650 PF13817 IS66 C-terminal element M892_RS05660 PF13817 IS66 C-terminal element M892_RS05660 PF13005 zinc-finger binding domain of transposase IS66 M892_RS05660 PF03050 Transposase IS66 family M892_RS05660 PF13007 Transposase C of IS166 homeodomain M892_RS05665 PF00581 Rhodanese-like domain M892_RS05775 PF08448 PAS fold M892_RS05775 PF00990 Diguanylate cyclase, GGDEF domain M892_RS05785 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain M892_RS05790 PF09619 Type III secretion system lipoprotein chaperone (YscW) M892_RS05800 PF13404 AsnC-type helix-turn-helix domain M892_RS05800 PF01037 Lrp/AsnC ligand binding domain M892_RS05805 PF00291 Pyridoxal-phosphate dependent enzyme M892_RS05820 PF00873 AcrB/AcrD/AcrF family M892_RS05825 PF00529 HlyD membrane-fusion protein of T1SS M892_RS05825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M892_RS05850 PF07690 Major Facilitator Superfamily M892_RS05855 PF03601 Conserved hypothetical protein 698 M892_RS05870 PF00501 AMP-binding enzyme M892_RS05870 PF13193 AMP-binding enzyme C-terminal domain M892_RS05875 PF13378 Enolase C-terminal domain-like M892_RS05880 PF00378 Enoyl-CoA hydratase/isomerase M892_RS05885 PF12697 Alpha/beta hydrolase family M892_RS05890 PF16582 Middle domain of thiamine pyrophosphate M892_RS05890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M892_RS05890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M892_RS05895 PF00425 chorismate binding enzyme M892_RS05900 PF00155 Aminotransferase class I and II M892_RS05910 PF01966 HD domain M892_RS05910 PF13286 Phosphohydrolase-associated domain M892_RS05930 PF13145 PPIC-type PPIASE domain M892_RS05935 PF00216 Bacterial DNA-binding protein M892_RS05940 PF02190 ATP-dependent protease La (LON) substrate-binding domain M892_RS05940 PF00004 ATPase family associated with various cellular activities (AAA) M892_RS05940 PF05362 Lon protease (S16) C-terminal proteolytic domain M892_RS05945 PF10431 C-terminal, D2-small domain, of ClpB protein M892_RS05945 PF07724 AAA domain (Cdc48 subfamily) M892_RS05945 PF06689 ClpX C4-type zinc finger M892_RS05950 PF00574 Clp protease M892_RS05955 PF05697 Bacterial trigger factor protein (TF) M892_RS05955 PF05698 Bacterial trigger factor protein (TF) C-terminus M892_RS05955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M892_RS05970 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component M892_RS05975 PF02696 Uncharacterized ACR, YdiU/UPF0061 family M892_RS05985 PF02386 Cation transport protein M892_RS05990 PF02254 TrkA-N domain M892_RS05990 PF02080 TrkA-C domain M892_RS05995 PF00271 Helicase conserved C-terminal domain M892_RS05995 PF00270 DEAD/DEAH box helicase M892_RS06000 PF07715 TonB-dependent Receptor Plug Domain M892_RS06000 PF00593 TonB dependent receptor M892_RS06005 PF17837 4'-phosphopantetheinyl transferase N-terminal domain M892_RS06005 PF01648 4'-phosphopantetheinyl transferase superfamily M892_RS06015 PF00975 Thioesterase domain M892_RS06015 PF13193 AMP-binding enzyme C-terminal domain M892_RS06015 PF00668 Condensation domain M892_RS06015 PF00501 AMP-binding enzyme M892_RS06015 PF00975 Thioesterase domain M892_RS06015 PF00550 Phosphopantetheine attachment site M892_RS06015 PF00668 Condensation domain M892_RS06015 PF13193 AMP-binding enzyme C-terminal domain M892_RS06015 PF00501 AMP-binding enzyme M892_RS06015 PF00550 Phosphopantetheine attachment site M892_RS06020 PF00550 Phosphopantetheine attachment site M892_RS06020 PF00857 Isochorismatase family M892_RS06025 PF13193 AMP-binding enzyme C-terminal domain M892_RS06025 PF00501 AMP-binding enzyme M892_RS06030 PF00425 chorismate binding enzyme M892_RS06065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain M892_RS06065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain M892_RS06070 PF01773 Na+ dependent nucleoside transporter N-terminus M892_RS06070 PF07662 Na+ dependent nucleoside transporter C-terminus M892_RS06070 PF07670 Nucleoside recognition M892_RS06075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS06075 PF03466 LysR substrate binding domain M892_RS06080 PF13406 Transglycosylase SLT domain M892_RS06085 PF05166 YcgL domain M892_RS06090 PF05209 Septum formation inhibitor MinC, N-terminal domain M892_RS06090 PF03775 Septum formation inhibitor MinC, C-terminal domain M892_RS06095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain M892_RS06100 PF03776 Septum formation topological specificity factor MinE M892_RS06110 PF01612 3'-5' exonuclease M892_RS06110 PF00570 HRDC domain M892_RS06115 PF00501 AMP-binding enzyme M892_RS06115 PF13193 AMP-binding enzyme C-terminal domain M892_RS06120 PF12697 Alpha/beta hydrolase family M892_RS06125 PF03843 Outer membrane lipoprotein Slp family M892_RS06135 PF00814 Glycoprotease family M892_RS06140 PF13307 Helicase C-terminal domain M892_RS06140 PF04851 Type III restriction enzyme, res subunit M892_RS06145 PF00551 Formyl transferase M892_RS06145 PF01842 ACT domain M892_RS06160 PF06185 YecM protein M892_RS06165 PF03485 Arginyl tRNA synthetase N terminal domain M892_RS06165 PF05746 DALR anticodon binding domain M892_RS06165 PF00750 tRNA synthetases class I (R) M892_RS06185 PF07664 Ferrous iron transport protein B C terminus M892_RS06185 PF17910 FeoB cytosolic helical domain M892_RS06185 PF02421 Ferrous iron transport protein B M892_RS06185 PF07670 Nucleoside recognition M892_RS06190 PF04023 FeoA domain M892_RS06195 PF12833 Helix-turn-helix domain M892_RS06195 PF02311 AraC-like ligand binding domain M892_RS06200 PF01297 Zinc-uptake complex component A periplasmic M892_RS06205 PF00005 ABC transporter M892_RS06210 PF00950 ABC 3 transport family M892_RS06215 PF02629 CoA binding domain M892_RS06215 PF00549 CoA-ligase M892_RS06220 PF08442 ATP-grasp domain M892_RS06220 PF00549 CoA-ligase M892_RS06225 PF02817 e3 binding domain M892_RS06225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M892_RS06225 PF00364 Biotin-requiring enzyme M892_RS06230 PF16078 2-oxoglutarate dehydrogenase N-terminus M892_RS06230 PF00676 Dehydrogenase E1 component M892_RS06230 PF16870 2-oxoglutarate dehydrogenase C-terminal M892_RS06230 PF02779 Transketolase, pyrimidine binding domain M892_RS06235 PF13085 2Fe-2S iron-sulfur cluster binding domain M892_RS06240 PF02910 Fumarate reductase flavoprotein C-term M892_RS06240 PF00890 FAD binding domain M892_RS06245 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M892_RS06250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit M892_RS06255 PF00285 Citrate synthase, C-terminal domain M892_RS06260 PF01548 Transposase M892_RS06260 PF02371 Transposase IS116/IS110/IS902 family M892_RS06265 PF01784 NIF3 (NGG1p interacting factor 3) M892_RS06275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M892_RS06275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M892_RS06275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M892_RS06275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M892_RS06280 PF03925 SeqA protein C-terminal domain M892_RS06280 PF17206 SeqA protein N-terminal domain M892_RS06285 PF00561 alpha/beta hydrolase fold M892_RS06295 PF00258 Flavodoxin M892_RS06305 PF01475 Ferric uptake regulator family M892_RS06310 PF08334 Type II secretion system (T2SS), protein G M892_RS06310 PF07963 Prokaryotic N-terminal methylation motif M892_RS06315 PF00749 tRNA synthetases class I (E and Q), catalytic domain M892_RS06315 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain M892_RS06320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M892_RS06320 PF00367 phosphotransferase system, EIIB M892_RS06320 PF02378 Phosphotransferase system, EIIC M892_RS06325 PF01979 Amidohydrolase family M892_RS06330 PF01047 MarR family M892_RS06330 PF00480 ROK family M892_RS06335 PF00999 Sodium/hydrogen exchanger family M892_RS06335 PF02254 TrkA-N domain M892_RS06340 PF13537 Glutamine amidotransferase domain M892_RS06340 PF00733 Asparagine synthase M892_RS06350 PF00854 POT family M892_RS06355 PF00762 Ferrochelatase M892_RS06360 PF05191 Adenylate kinase, active site lid M892_RS06365 PF00183 Hsp90 protein M892_RS06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS06370 PF00486 Transcriptional regulatory protein, C terminal M892_RS06375 PF17323 Trans-membrane regulatory protein ToxS M892_RS06390 PF12850 Calcineurin-like phosphoesterase superfamily domain M892_RS06400 PF01370 NAD dependent epimerase/dehydratase family M892_RS06400 PF08338 Domain of unknown function (DUF1731) M892_RS06405 PF00106 short chain dehydrogenase M892_RS06410 PF00085 Thioredoxin M892_RS06415 PF01145 SPFH domain / Band 7 family M892_RS06415 PF16200 C-terminal region of band_7 M892_RS06445 PF04354 ZipA, C-terminal FtsZ-binding domain M892_RS06455 PF00291 Pyridoxal-phosphate dependent enzyme M892_RS06460 PF00381 PTS HPr component phosphorylation site M892_RS06465 PF02896 PEP-utilising enzyme, TIM barrel domain M892_RS06465 PF05524 PEP-utilising enzyme, N-terminal M892_RS06465 PF00391 PEP-utilising enzyme, mobile domain M892_RS06470 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 M892_RS06475 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS06480 PF13358 DDE superfamily endonuclease M892_RS06490 PF07196 Flagellin hook IN motif M892_RS06490 PF00700 Bacterial flagellin C-terminal helical region M892_RS06490 PF00669 Bacterial flagellin N-terminal helical region M892_RS06495 PF00700 Bacterial flagellin C-terminal helical region M892_RS06495 PF07196 Flagellin hook IN motif M892_RS06495 PF00669 Bacterial flagellin N-terminal helical region M892_RS06500 PF00700 Bacterial flagellin C-terminal helical region M892_RS06500 PF07196 Flagellin hook IN motif M892_RS06500 PF00669 Bacterial flagellin N-terminal helical region M892_RS06510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M892_RS06510 PF07196 Flagellin hook IN motif M892_RS06515 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS06520 PF10135 Rod binding protein M892_RS06520 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase M892_RS06525 PF02119 Flagellar P-ring protein M892_RS06530 PF02107 Flagellar L-ring protein M892_RS06535 PF00460 Flagella basal body rod protein M892_RS06535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M892_RS06540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M892_RS06540 PF00460 Flagella basal body rod protein M892_RS06545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M892_RS06545 PF00460 Flagella basal body rod protein M892_RS06545 PF07559 Flagellar basal body protein FlaE M892_RS06550 PF03963 Flagellar hook capping protein - N-terminal region M892_RS06550 PF13860 FlgD Ig-like domain M892_RS06550 PF13861 FlgD Tudor-like domain M892_RS06555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal M892_RS06555 PF00460 Flagella basal body rod protein M892_RS06560 PF00460 Flagella basal body rod protein M892_RS06565 PF03705 CheR methyltransferase, all-alpha domain M892_RS06565 PF01739 CheR methyltransferase, SAM binding domain M892_RS06570 PF01584 CheW-like domain M892_RS06570 PF00072 Response regulator receiver domain M892_RS06615 PF00691 OmpA family M892_RS06615 PF01389 OmpA-like transmembrane domain M892_RS06625 PF00749 tRNA synthetases class I (E and Q), catalytic domain M892_RS06630 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) M892_RS06635 PF13609 Gram-negative porin M892_RS06640 PF00403 Heavy-metal-associated domain M892_RS06655 PF00728 Glycosyl hydrolase family 20, catalytic domain M892_RS06655 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain M892_RS06655 PF03173 Putative carbohydrate binding domain M892_RS06655 PF02838 Glycosyl hydrolase family 20, domain 2 M892_RS06690 PF01713 Smr domain M892_RS06695 PF01479 S4 domain M892_RS06695 PF00849 RNA pseudouridylate synthase M892_RS06700 PF04073 Aminoacyl-tRNA editing domain M892_RS06705 PF02872 5'-nucleotidase, C-terminal domain M892_RS06705 PF00149 Calcineurin-like phosphoesterase M892_RS06710 PF00793 DAHP synthetase I family M892_RS06715 PF13369 Transglutaminase-like superfamily M892_RS06720 PF04247 Invasion gene expression up-regulator, SirB M892_RS06725 PF13847 Methyltransferase domain M892_RS06725 PF17827 PrmC N-terminal domain M892_RS06730 PF00472 RF-1 domain M892_RS06730 PF03462 PCRF domain M892_RS06735 PF01488 Shikimate / quinate 5-dehydrogenase M892_RS06735 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain M892_RS06735 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain M892_RS06740 PF03550 Outer membrane lipoprotein LolB M892_RS06745 PF00288 GHMP kinases N terminal domain M892_RS06745 PF08544 GHMP kinases C terminal M892_RS06750 PF14572 Phosphoribosyl synthetase-associated domain M892_RS06750 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase M892_RS06755 PF01195 Peptidyl-tRNA hydrolase M892_RS06760 PF06071 Protein of unknown function (DUF933) M892_RS06760 PF01926 50S ribosome-binding GTPase M892_RS06785 PF01494 FAD binding domain M892_RS06790 PF00919 Uncharacterized protein family UPF0004 M892_RS06790 PF01938 TRAM domain M892_RS06790 PF04055 Radical SAM superfamily M892_RS06795 PF02562 PhoH-like protein M892_RS06800 PF02130 Uncharacterized protein family UPF0054 M892_RS06805 PF00571 CBS domain M892_RS06805 PF03471 Transporter associated domain M892_RS06810 PF00795 Carbon-nitrogen hydrolase M892_RS06820 PF07295 Zinc-ribbon containing domain M892_RS06825 PF08264 Anticodon-binding domain of tRNA M892_RS06825 PF13603 Leucyl-tRNA synthetase, Domain 2 M892_RS06825 PF00133 tRNA synthetases class I (I, L, M and V) M892_RS06830 PF04390 Lipopolysaccharide-assembly M892_RS06835 PF14840 Processivity clamp loader gamma complex DNA pol III C-term M892_RS06835 PF06144 DNA polymerase III, delta subunit M892_RS06845 PF02590 Predicted SPOUT methyltransferase M892_RS06850 PF03717 Penicillin-binding Protein dimerisation domain M892_RS06850 PF00905 Penicillin binding protein transpeptidase domain M892_RS06855 PF01098 Cell cycle protein M892_RS06860 PF03330 Lytic transglycolase M892_RS06860 PF05036 Sporulation related domain M892_RS06865 PF07943 Penicillin-binding protein 5, C-terminal domain M892_RS06865 PF00768 D-alanyl-D-alanine carboxypeptidase M892_RS06870 PF04359 Protein of unknown function (DUF493) M892_RS06880 PF04055 Radical SAM superfamily M892_RS06880 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family M892_RS06885 PF02371 Transposase IS116/IS110/IS902 family M892_RS06885 PF01548 Transposase M892_RS06890 PF01548 Transposase M892_RS06890 PF02371 Transposase IS116/IS110/IS902 family M892_RS06895 PF00464 Serine hydroxymethyltransferase M892_RS06900 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) M892_RS06900 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 M892_RS06905 PF00128 Alpha amylase, catalytic domain M892_RS06905 PF16657 Maltogenic Amylase, C-terminal domain M892_RS06910 PF02378 Phosphotransferase system, EIIC M892_RS06910 PF00367 phosphotransferase system, EIIB M892_RS06915 PF00356 Bacterial regulatory proteins, lacI family M892_RS06925 PF00005 ABC transporter M892_RS06925 PF09383 NIL domain M892_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS06935 PF03180 NLPA lipoprotein M892_RS06950 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) M892_RS06955 PF07348 Syd protein (SUKH-2) M892_RS06960 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M892_RS06960 PF14489 QueF-like protein M892_RS06970 PF00990 Diguanylate cyclase, GGDEF domain M892_RS06975 PF11892 Domain of unknown function (DUF3412) M892_RS06975 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases M892_RS06975 PF03641 Possible lysine decarboxylase M892_RS06980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M892_RS06980 PF01367 5'-3' exonuclease, C-terminal SAM fold M892_RS06990 PF01728 FtsJ-like methyltransferase M892_RS06990 PF18125 RlmM ferredoxin-like domain M892_RS06995 PF04241 Protein of unknown function (DUF423) M892_RS07005 PF03466 LysR substrate binding domain M892_RS07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS07010 PF13005 zinc-finger binding domain of transposase IS66 M892_RS07010 PF03050 Transposase IS66 family M892_RS07010 PF13817 IS66 C-terminal element M892_RS07010 PF13007 Transposase C of IS166 homeodomain M892_RS07025 PF02568 Thiamine biosynthesis protein (ThiI) M892_RS07025 PF02926 THUMP domain M892_RS07030 PF00691 OmpA family M892_RS07030 PF13677 Membrane MotB of proton-channel complex MotA/MotB M892_RS07035 PF01618 MotA/TolQ/ExbB proton channel family M892_RS07040 PF02609 Exonuclease VII small subunit M892_RS07045 PF00348 Polyprenyl synthetase M892_RS07050 PF13292 1-deoxy-D-xylulose-5-phosphate synthase M892_RS07050 PF02780 Transketolase, C-terminal domain M892_RS07050 PF02779 Transketolase, pyrimidine binding domain M892_RS07055 PF04608 Phosphatidylglycerophosphatase A M892_RS07060 PF02769 AIR synthase related protein, C-terminal domain M892_RS07060 PF00586 AIR synthase related protein, N-terminal domain M892_RS07065 PF01029 NusB family M892_RS07070 PF00885 6,7-dimethyl-8-ribityllumazine synthase M892_RS07075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase M892_RS07075 PF00925 GTP cyclohydrolase II M892_RS07080 PF00677 Lumazine binding domain M892_RS07085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region M892_RS07085 PF01872 RibD C-terminal domain M892_RS07090 PF03477 ATP cone domain M892_RS07095 PF00171 Aldehyde dehydrogenase family M892_RS07100 PF00696 Amino acid kinase family M892_RS07100 PF01472 PUA domain M892_RS07105 PF07417 Sigma factor-binding transcriptional regulator Crl M892_RS07110 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) M892_RS07115 PF00156 Phosphoribosyl transferase domain M892_RS07120 PF00860 Permease family M892_RS07125 PF07687 Peptidase dimerisation domain M892_RS07125 PF01546 Peptidase family M20/M25/M40 M892_RS07130 PF01609 Transposase DDE domain M892_RS07130 PF13006 Insertion element 4 transposase N-terminal M892_RS07150 PF13340 Putative transposase of IS4/5 family (DUF4096) M892_RS07160 PF02769 AIR synthase related protein, C-terminal domain M892_RS07160 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M892_RS07160 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M892_RS07165 PF00497 Bacterial extracellular solute-binding proteins, family 3 M892_RS07165 PF01464 Transglycosylase SLT domain M892_RS07170 PF13007 Transposase C of IS166 homeodomain M892_RS07170 PF13817 IS66 C-terminal element M892_RS07170 PF03050 Transposase IS66 family M892_RS07170 PF13005 zinc-finger binding domain of transposase IS66 M892_RS07180 PF13005 zinc-finger binding domain of transposase IS66 M892_RS07180 PF13007 Transposase C of IS166 homeodomain M892_RS07180 PF13817 IS66 C-terminal element M892_RS07180 PF03050 Transposase IS66 family M892_RS07195 PF14437 MafB19-like deaminase M892_RS07200 PF03806 AbgT putative transporter family M892_RS07225 PF00114 Pilin (bacterial filament) M892_RS07225 PF07963 Prokaryotic N-terminal methylation motif M892_RS07230 PF00684 DnaJ central domain M892_RS07230 PF01556 DnaJ C terminal domain M892_RS07230 PF00226 DnaJ domain M892_RS07235 PF00012 Hsp70 protein M892_RS07240 PF00375 Sodium:dicarboxylate symporter family M892_RS07245 PF01025 GrpE M892_RS07250 PF01513 ATP-NAD kinase M892_RS07255 PF02463 RecF/RecN/SMC N terminal domain M892_RS07260 PF00583 Acetyltransferase (GNAT) family M892_RS07265 PF04355 SmpA / OmlA family M892_RS07270 PF02281 Transposase Tn5 dimerisation domain M892_RS07270 PF01609 Transposase DDE domain M892_RS07270 PF14706 Transposase DNA-binding M892_RS07275 PF01609 Transposase DDE domain M892_RS07275 PF02281 Transposase Tn5 dimerisation domain M892_RS07275 PF14706 Transposase DNA-binding M892_RS07280 PF03658 RnfH family Ubiquitin M892_RS07285 PF03364 Polyketide cyclase / dehydrase and lipid transport M892_RS07290 PF01668 SmpB protein M892_RS07295 PF13356 Arm DNA-binding domain M892_RS07295 PF00589 Phage integrase family M892_RS07310 PF18766 SWI2/SNF2 ATPase M892_RS07310 PF12008 Type I restriction and modification enzyme - subunit R C terminal M892_RS07310 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M892_RS07315 PF01609 Transposase DDE domain M892_RS07315 PF13006 Insertion element 4 transposase N-terminal M892_RS07330 PF12161 HsdM N-terminal domain M892_RS07330 PF02384 N-6 DNA Methylase M892_RS07365 PF03466 LysR substrate binding domain M892_RS07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS07370 PF12805 FUSC-like inner membrane protein yccS M892_RS07385 PF13005 zinc-finger binding domain of transposase IS66 M892_RS07385 PF13007 Transposase C of IS166 homeodomain M892_RS07385 PF13817 IS66 C-terminal element M892_RS07385 PF03050 Transposase IS66 family M892_RS07430 PF13333 Integrase core domain M892_RS07430 PF00665 Integrase core domain M892_RS07430 PF13276 HTH-like domain M892_RS07440 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS07445 PF13358 DDE superfamily endonuclease M892_RS07450 PF00924 Mechanosensitive ion channel M892_RS07455 PF03330 Lytic transglycolase M892_RS07455 PF05036 Sporulation related domain M892_RS07460 PF03466 LysR substrate binding domain M892_RS07460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS07470 PF01235 Sodium:alanine symporter family M892_RS07475 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS07480 PF01184 GPR1/FUN34/yaaH family M892_RS07485 PF00704 Glycosyl hydrolases family 18 M892_RS07485 PF06483 Chitinase C M892_RS07490 PF03553 Na+/H+ antiporter family M892_RS07505 PF03553 Na+/H+ antiporter family M892_RS07510 PF02540 NAD synthase M892_RS07510 PF00117 Glutamine amidotransferase class-I M892_RS07510 PF00958 GMP synthase C terminal domain M892_RS07515 PF00571 CBS domain M892_RS07515 PF00478 IMP dehydrogenase / GMP reductase domain M892_RS07520 PF13742 OB-fold nucleic acid binding domain M892_RS07520 PF02601 Exonuclease VII, large subunit M892_RS07535 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal M892_RS07535 PF01926 50S ribosome-binding GTPase M892_RS07540 PF13360 PQQ-like domain M892_RS07545 PF09976 Tetratricopeptide repeat-like domain M892_RS07550 PF13393 Histidyl-tRNA synthetase M892_RS07550 PF03129 Anticodon binding domain M892_RS07555 PF04551 GcpE protein M892_RS07560 PF13464 Domain of unknown function (DUF4115) M892_RS07565 PF04055 Radical SAM superfamily M892_RS07570 PF00334 Nucleoside diphosphate kinase M892_RS07575 PF00883 Cytosol aminopeptidase family, catalytic domain M892_RS07575 PF12404 Peptidase M892_RS07580 PF01609 Transposase DDE domain M892_RS07580 PF13006 Insertion element 4 transposase N-terminal M892_RS07585 PF04384 Iron-sulphur cluster assembly M892_RS07590 PF00111 2Fe-2S iron-sulfur cluster binding domain M892_RS07595 PF00012 Hsp70 protein M892_RS07600 PF00226 DnaJ domain M892_RS07600 PF07743 HSCB C-terminal oligomerisation domain M892_RS07605 PF01521 Iron-sulphur cluster biosynthesis M892_RS07610 PF01592 NifU-like N terminal domain M892_RS07615 PF00266 Aminotransferase class-V M892_RS07620 PF02082 Transcriptional regulator M892_RS07625 PF00588 SpoU rRNA Methylase family M892_RS07645 PF07549 SecD/SecF GG Motif M892_RS07645 PF02355 Protein export membrane protein M892_RS07650 PF07549 SecD/SecF GG Motif M892_RS07650 PF02355 Protein export membrane protein M892_RS07650 PF13721 SecD export protein N-terminal TM region M892_RS07655 PF02699 Preprotein translocase subunit M892_RS07660 PF01702 Queuine tRNA-ribosyltransferase M892_RS07665 PF02547 Queuosine biosynthesis protein M892_RS07675 PF00571 CBS domain M892_RS07680 PF00463 Isocitrate lyase family M892_RS07685 PF01274 Malate synthase M892_RS07690 PF03466 LysR substrate binding domain M892_RS07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS07695 PF10417 C-terminal domain of 1-Cys peroxiredoxin M892_RS07695 PF00578 AhpC/TSA family M892_RS07700 PF03932 CutC family M892_RS07705 PF03976 Polyphosphate kinase 2 (PPK2) M892_RS07710 PF13358 DDE superfamily endonuclease M892_RS07720 PF01895 PhoU domain M892_RS07725 PF00005 ABC transporter M892_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS07735 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS07740 PF02503 Polyphosphate kinase middle domain M892_RS07740 PF13090 Polyphosphate kinase C-terminal domain 2 M892_RS07740 PF17941 Polyphosphate kinase C-terminal domain 1 M892_RS07740 PF13089 Polyphosphate kinase N-terminal domain M892_RS07745 PF02541 Ppx/GppA phosphatase family M892_RS07750 PF12849 PBP superfamily domain M892_RS07755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS07755 PF00512 His Kinase A (phospho-acceptor) domain M892_RS07755 PF00989 PAS fold M892_RS07755 PF11808 Phosphate regulon sensor protein PhoR M892_RS07760 PF00486 Transcriptional regulatory protein, C terminal M892_RS07760 PF00072 Response regulator receiver domain M892_RS07765 PF04381 Putative exonuclease, RdgC M892_RS07770 PF01136 Peptidase family U32 M892_RS07770 PF16325 Peptidase family U32 C-terminal domain M892_RS07775 PF00037 4Fe-4S binding domain M892_RS07785 PF03411 Penicillin-insensitive murein endopeptidase M892_RS07800 PF13358 DDE superfamily endonuclease M892_RS07810 PF13358 DDE superfamily endonuclease M892_RS07855 PF07724 AAA domain (Cdc48 subfamily) M892_RS07855 PF00004 ATPase family associated with various cellular activities (AAA) M892_RS07855 PF17871 AAA lid domain M892_RS07855 PF02861 Clp amino terminal domain, pathogenicity island component M892_RS07855 PF10431 C-terminal, D2-small domain, of ClpB protein M892_RS07860 PF02578 Multi-copper polyphenol oxidoreductase laccase M892_RS07865 PF00849 RNA pseudouridylate synthase M892_RS07865 PF01479 S4 domain M892_RS07870 PF13525 Outer membrane lipoprotein M892_RS07875 PF01464 Transglycosylase SLT domain M892_RS07880 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M892_RS07885 PF01817 Chorismate mutase type II M892_RS07885 PF00800 Prephenate dehydratase M892_RS07890 PF01931 Protein of unknown function DUF84 M892_RS07895 PF01371 Trp repressor protein M892_RS07900 PF01464 Transglycosylase SLT domain M892_RS07900 PF14718 Soluble lytic murein transglycosylase L domain M892_RS07905 PF00005 ABC transporter M892_RS07905 PF12848 ABC transporter M892_RS07910 PF07238 PilZ domain M892_RS07915 PF04225 Opacity-associated protein A LysM-like domain M892_RS07915 PF01551 Peptidase family M23 M892_RS07925 PF01817 Chorismate mutase type II M892_RS07925 PF02153 Prephenate dehydrogenase M892_RS07930 PF00793 DAHP synthetase I family M892_RS07935 PF00933 Glycosyl hydrolase family 3 N terminal domain M892_RS07940 PF03702 Anhydro-N-acetylmuramic acid kinase M892_RS07945 PF01380 SIS domain M892_RS07960 PF02554 Carbon starvation protein CstA M892_RS07965 PF06580 Histidine kinase M892_RS07965 PF07694 5TMR of 5TMR-LYT M892_RS07970 PF04397 LytTr DNA-binding domain M892_RS07970 PF00072 Response regulator receiver domain M892_RS07975 PF02401 LytB protein M892_RS07980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M892_RS07985 PF01252 Signal peptidase (SPase) II M892_RS07990 PF00133 tRNA synthetases class I (I, L, M and V) M892_RS07990 PF06827 Zinc finger found in FPG and IleRS M892_RS07990 PF08264 Anticodon-binding domain of tRNA M892_RS07995 PF01687 Riboflavin kinase M892_RS07995 PF06574 FAD synthetase M892_RS08000 PF03023 Lipid II flippase MurJ M892_RS08005 PF01649 Ribosomal protein S20 M892_RS08010 PF01022 Bacterial regulatory protein, arsR family M892_RS08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS08015 PF03466 LysR substrate binding domain M892_RS08020 PF02690 Na+/Pi-cotransporter M892_RS08030 PF00303 Thymidylate synthase M892_RS08035 PF01790 Prolipoprotein diacylglyceryl transferase M892_RS08040 PF01925 Sulfite exporter TauE/SafE M892_RS08045 PF00391 PEP-utilising enzyme, mobile domain M892_RS08045 PF01590 GAF domain M892_RS08045 PF05524 PEP-utilising enzyme, N-terminal M892_RS08045 PF02896 PEP-utilising enzyme, TIM barrel domain M892_RS08050 PF00293 NUDIX domain M892_RS08055 PF02976 DNA mismatch repair enzyme MutH M892_RS08065 PF00248 Aldo/keto reductase family M892_RS08075 PF00158 Sigma-54 interaction domain M892_RS08075 PF02954 Bacterial regulatory protein, Fis family M892_RS08075 PF00072 Response regulator receiver domain M892_RS08080 PF01336 OB-fold nucleic acid binding domain M892_RS08080 PF00152 tRNA synthetases class II (D, K and N) M892_RS08085 PF00472 RF-1 domain M892_RS08085 PF03462 PCRF domain M892_RS08090 PF02272 DHHA1 domain M892_RS08090 PF17768 RecJ OB domain M892_RS08090 PF01368 DHH family M892_RS08095 PF10411 Disulfide bond isomerase protein N-terminus M892_RS08095 PF13098 Thioredoxin-like domain M892_RS08100 PF02899 Phage integrase, N-terminal SAM-like domain M892_RS08100 PF00589 Phage integrase family M892_RS08105 PF00258 Flavodoxin M892_RS08110 PF05525 Branched-chain amino acid transport protein M892_RS08115 PF05175 Methyltransferase small domain M892_RS08120 PF00270 DEAD/DEAH box helicase M892_RS08120 PF00271 Helicase conserved C-terminal domain M892_RS08130 PF14706 Transposase DNA-binding M892_RS08130 PF01609 Transposase DDE domain M892_RS08130 PF02281 Transposase Tn5 dimerisation domain M892_RS08135 PF03883 Peroxide stress protein YaaA M892_RS08140 PF01235 Sodium:alanine symporter family M892_RS08155 PF03167 Uracil DNA glycosylase superfamily M892_RS08160 PF01261 Xylose isomerase-like TIM barrel M892_RS08165 PF01228 Glycine radical M892_RS08175 PF14821 Threonine synthase N terminus M892_RS08175 PF00291 Pyridoxal-phosphate dependent enzyme M892_RS08180 PF08544 GHMP kinases C terminal M892_RS08180 PF00288 GHMP kinases N terminal domain M892_RS08185 PF00696 Amino acid kinase family M892_RS08185 PF01842 ACT domain M892_RS08185 PF00742 Homoserine dehydrogenase M892_RS08185 PF03447 Homoserine dehydrogenase, NAD binding domain M892_RS08185 PF13840 ACT domain M892_RS08195 PF03737 Aldolase/RraA M892_RS08205 PF01609 Transposase DDE domain M892_RS08205 PF13006 Insertion element 4 transposase N-terminal M892_RS08210 PF00486 Transcriptional regulatory protein, C terminal M892_RS08210 PF00072 Response regulator receiver domain M892_RS08220 PF00512 His Kinase A (phospho-acceptor) domain M892_RS08220 PF00989 PAS fold M892_RS08220 PF01627 Hpt domain M892_RS08220 PF18415 Histidine kinase receptor ArcB trans-membrane domain M892_RS08220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS08220 PF00072 Response regulator receiver domain M892_RS08225 PF00360 Phytochrome region M892_RS08225 PF00990 Diguanylate cyclase, GGDEF domain M892_RS08225 PF01590 GAF domain M892_RS08225 PF00563 EAL domain M892_RS08230 PF16199 Radical_SAM C-terminal domain M892_RS08230 PF04055 Radical SAM superfamily M892_RS08235 PF04898 Glutamate synthase central domain M892_RS08235 PF01493 GXGXG motif M892_RS08235 PF00310 Glutamine amidotransferases class-II M892_RS08235 PF01645 Conserved region in glutamate synthase M892_RS08240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M892_RS08240 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS08245 PF01645 Conserved region in glutamate synthase M892_RS08245 PF04898 Glutamate synthase central domain M892_RS08245 PF01493 GXGXG motif M892_RS08245 PF00310 Glutamine amidotransferases class-II M892_RS08250 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster M892_RS08250 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS08260 PF01048 Phosphorylase superfamily M892_RS08270 PF01497 Periplasmic binding protein M892_RS08275 PF03458 UPF0126 domain M892_RS08280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS08280 PF03466 LysR substrate binding domain M892_RS08285 PF01925 Sulfite exporter TauE/SafE M892_RS08300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M892_RS08300 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain M892_RS08300 PF02142 MGS-like domain M892_RS08305 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain M892_RS08305 PF00117 Glutamine amidotransferase class-I M892_RS08310 PF01113 Dihydrodipicolinate reductase, N-terminus M892_RS08310 PF05173 Dihydrodipicolinate reductase, C-terminus M892_RS08315 PF00293 NUDIX domain M892_RS08320 PF02810 SEC-C motif M892_RS08320 PF07517 SecA DEAD-like domain M892_RS08320 PF07516 SecA Wing and Scaffold domain M892_RS08320 PF01043 SecA preprotein cross-linking domain M892_RS08330 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase M892_RS08335 PF12327 FtsZ family, C-terminal domain M892_RS08335 PF00091 Tubulin/FtsZ family, GTPase domain M892_RS08340 PF02491 SHS2 domain inserted in FTSA M892_RS08345 PF03799 Cell division protein FtsQ M892_RS08345 PF08478 POTRA domain, FtsQ-type M892_RS08350 PF08245 Mur ligase middle domain M892_RS08350 PF02875 Mur ligase family, glutamate ligase domain M892_RS08350 PF01225 Mur ligase family, catalytic domain M892_RS08355 PF04101 Glycosyltransferase family 28 C-terminal domain M892_RS08355 PF03033 Glycosyltransferase family 28 N-terminal domain M892_RS08360 PF01098 Cell cycle protein M892_RS08365 PF02875 Mur ligase family, glutamate ligase domain M892_RS08365 PF08245 Mur ligase middle domain M892_RS08370 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 M892_RS08370 PF00953 Glycosyl transferase family 4 M892_RS08375 PF08245 Mur ligase middle domain M892_RS08375 PF01225 Mur ligase family, catalytic domain M892_RS08375 PF02875 Mur ligase family, glutamate ligase domain M892_RS08380 PF01225 Mur ligase family, catalytic domain M892_RS08380 PF02875 Mur ligase family, glutamate ligase domain M892_RS08380 PF08245 Mur ligase middle domain M892_RS08385 PF03717 Penicillin-binding Protein dimerisation domain M892_RS08385 PF00905 Penicillin binding protein transpeptidase domain M892_RS08390 PF04999 Cell division protein FtsL M892_RS08395 PF01795 MraW methylase family M892_RS08400 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M892_RS08405 PF04348 LppC putative lipoprotein M892_RS08410 PF02021 Uncharacterised protein family UPF0102 M892_RS08415 PF13580 SIS domain M892_RS08420 PF04972 BON domain M892_RS08425 PF04386 Stringent starvation protein B M892_RS08430 PF00043 Glutathione S-transferase, C-terminal domain M892_RS08430 PF02798 Glutathione S-transferase, N-terminal domain M892_RS08435 PF02167 Cytochrome C1 family M892_RS08440 PF00033 Cytochrome b/b6/petB M892_RS08440 PF00032 Cytochrome b(C-terminal)/b6/petD M892_RS08445 PF00355 Rieske [2Fe-2S] domain M892_RS08445 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal M892_RS08450 PF00380 Ribosomal protein S9/S16 M892_RS08455 PF00572 Ribosomal protein L13 M892_RS08460 PF03969 AFG1-like ATPase M892_RS08465 PF06295 Protein of unknown function (DUF1043) M892_RS08470 PF00595 PDZ domain M892_RS08475 PF13180 PDZ domain M892_RS08480 PF03989 DNA gyrase C-terminal domain, beta-propeller M892_RS08480 PF00521 DNA gyrase/topoisomerase IV, subunit A M892_RS08485 PF01751 Toprim domain M892_RS08485 PF00986 DNA gyrase B subunit, carboxyl terminus M892_RS08485 PF00204 DNA gyrase B M892_RS08485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS08490 PF05728 Uncharacterised protein family (UPF0227) M892_RS08495 PF00149 Calcineurin-like phosphoesterase M892_RS08500 PF06853 Protein of unknown function (DUF1249) M892_RS08505 PF00293 NUDIX domain M892_RS08510 PF02321 Outer membrane efflux protein M892_RS08515 PF01467 Cytidylyltransferase-like M892_RS08515 PF00294 pfkB family carbohydrate kinase M892_RS08520 PF03710 Glutamate-ammonia ligase adenylyltransferase M892_RS08520 PF08335 GlnD PII-uridylyltransferase M892_RS08525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS08525 PF00672 HAMP domain M892_RS08525 PF02743 Cache domain M892_RS08530 PF07885 Ion channel M892_RS08535 PF01928 CYTH domain M892_RS08540 PF01865 Protein of unknown function DUF47 M892_RS08545 PF01384 Phosphate transporter family M892_RS08550 PF08239 Bacterial SH3 domain M892_RS08560 PF13401 AAA domain M892_RS08560 PF01471 Putative peptidoglycan binding domain M892_RS08565 PF12627 Probable RNA and SrmB- binding site of polymerase A M892_RS08565 PF01743 Poly A polymerase head domain M892_RS08565 PF01966 HD domain M892_RS08570 PF02673 Bacitracin resistance protein BacA M892_RS08575 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M892_RS08580 PF02152 Dihydroneopterin aldolase M892_RS08585 PF02660 Glycerol-3-phosphate acyltransferase M892_RS08590 PF00561 alpha/beta hydrolase fold M892_RS08595 PF00814 Glycoprotease family M892_RS08600 PF01165 Ribosomal protein S21 M892_RS08605 PF09424 Yqey-like protein M892_RS08610 PF01807 CHC2 zinc finger M892_RS08610 PF10410 DnaB-helicase binding domain of primase M892_RS08610 PF08278 DNA primase DnaG DnaB-binding M892_RS08610 PF08275 DNA primase catalytic core, N-terminal domain M892_RS08615 PF04539 Sigma-70 region 3 M892_RS08615 PF03979 Sigma-70 factor, region 1.1 M892_RS08615 PF04546 Sigma-70, non-essential region M892_RS08615 PF00140 Sigma-70 factor, region 1.2 M892_RS08615 PF04542 Sigma-70 region 2 M892_RS08615 PF04545 Sigma-70, region 4 M892_RS08635 PF03050 Transposase IS66 family M892_RS08635 PF13005 zinc-finger binding domain of transposase IS66 M892_RS08635 PF13007 Transposase C of IS166 homeodomain M892_RS08635 PF13817 IS66 C-terminal element M892_RS08655 PF00589 Phage integrase family M892_RS08655 PF14659 Phage integrase, N-terminal SAM-like domain M892_RS08655 PF13356 Arm DNA-binding domain M892_RS08680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M892_RS08680 PF02378 Phosphotransferase system, EIIC M892_RS08680 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M892_RS08685 PF01232 Mannitol dehydrogenase Rossmann domain M892_RS08685 PF08125 Mannitol dehydrogenase C-terminal domain M892_RS08690 PF05068 Mannitol repressor M892_RS08695 PF01380 SIS domain M892_RS08700 PF00455 DeoR C terminal sensor domain M892_RS08700 PF08220 DeoR-like helix-turn-helix domain M892_RS08705 PF00224 Pyruvate kinase, barrel domain M892_RS08705 PF02887 Pyruvate kinase, alpha/beta domain M892_RS08715 PF00990 Diguanylate cyclase, GGDEF domain M892_RS08715 PF17158 Membrane-associated sensor, integral membrane domain M892_RS08720 PF10369 Small subunit of acetolactate synthase M892_RS08725 PF00205 Thiamine pyrophosphate enzyme, central domain M892_RS08725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M892_RS08725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M892_RS08730 PF00501 AMP-binding enzyme M892_RS08735 PF03466 LysR substrate binding domain M892_RS08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS08745 PF01569 PAP2 superfamily M892_RS08765 PF00682 HMGL-like M892_RS08765 PF08502 LeuA allosteric (dimerisation) domain M892_RS08770 PF00180 Isocitrate/isopropylmalate dehydrogenase M892_RS08775 PF00330 Aconitase family (aconitate hydratase) M892_RS08780 PF00694 Aconitase C-terminal domain M892_RS08790 PF00226 DnaJ domain M892_RS08790 PF05099 Tellurite resistance protein TerB M892_RS08795 PF04453 LPS transport system D M892_RS08795 PF03968 OstA-like protein M892_RS08800 PF09312 SurA N-terminal domain M892_RS08805 PF04166 Pyridoxal phosphate biosynthetic protein PdxA M892_RS08810 PF00398 Ribosomal RNA adenine dimethylase M892_RS08815 PF04379 ApaG domain M892_RS08820 PF00149 Calcineurin-like phosphoesterase M892_RS08825 PF00186 Dihydrofolate reductase M892_RS08830 PF12821 Threonine/Serine exporter, ThrE M892_RS08835 PF06738 Putative threonine/serine exporter M892_RS08840 PF01926 50S ribosome-binding GTPase M892_RS08840 PF01018 GTP1/OBG M892_RS08845 PF01016 Ribosomal L27 protein M892_RS08850 PF00829 Ribosomal prokaryotic L21 protein M892_RS08855 PF00348 Polyprenyl synthetase M892_RS08860 PF13006 Insertion element 4 transposase N-terminal M892_RS08860 PF01609 Transposase DDE domain M892_RS08870 PF00056 lactate/malate dehydrogenase, NAD binding domain M892_RS08870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain M892_RS08875 PF02863 Arginine repressor, C-terminal domain M892_RS08875 PF01316 Arginine repressor, DNA binding domain M892_RS08880 PF16868 NMT1-like family M892_RS08895 PF00005 ABC transporter M892_RS08900 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS08910 PF02441 Flavoprotein M892_RS08915 PF02875 Mur ligase family, glutamate ligase domain M892_RS08915 PF08245 Mur ligase middle domain M892_RS08915 PF01225 Mur ligase family, catalytic domain M892_RS08920 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain M892_RS08925 PF00719 Inorganic pyrophosphatase M892_RS08930 PF13006 Insertion element 4 transposase N-terminal M892_RS08930 PF01609 Transposase DDE domain M892_RS08940 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like M892_RS08945 PF04357 TamB, inner membrane protein subunit of TAM complex M892_RS08950 PF01103 Surface antigen M892_RS08950 PF07244 Surface antigen variable number repeat M892_RS08950 PF17243 POTRA domain TamA domain 1 M892_RS08955 PF01625 Peptide methionine sulfoxide reductase M892_RS08965 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) M892_RS08975 PF00005 ABC transporter M892_RS09000 PF02080 TrkA-C domain M892_RS09000 PF03600 Citrate transporter M892_RS09005 PF00009 Elongation factor Tu GTP binding domain M892_RS09010 PF01507 Phosphoadenosine phosphosulfate reductase family M892_RS09015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases M892_RS09015 PF14824 Sirohaem biosynthesis protein central M892_RS09015 PF10414 Sirohaem synthase dimerisation region M892_RS09020 PF00149 Calcineurin-like phosphoesterase M892_RS09020 PF02872 5'-nucleotidase, C-terminal domain M892_RS09030 PF00271 Helicase conserved C-terminal domain M892_RS09030 PF00270 DEAD/DEAH box helicase M892_RS09030 PF03880 DbpA RNA binding domain M892_RS09035 PF13673 Acetyltransferase (GNAT) domain M892_RS09045 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS09055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M892_RS09055 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M892_RS09065 PF01196 Ribosomal protein L17 M892_RS09070 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain M892_RS09070 PF01000 RNA polymerase Rpb3/RpoA insert domain M892_RS09070 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain M892_RS09075 PF00163 Ribosomal protein S4/S9 N-terminal domain M892_RS09075 PF01479 S4 domain M892_RS09080 PF00411 Ribosomal protein S11 M892_RS09085 PF00416 Ribosomal protein S13/S18 M892_RS09090 PF00344 SecY translocase M892_RS09095 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A M892_RS09100 PF00327 Ribosomal protein L30p/L7e M892_RS09105 PF00333 Ribosomal protein S5, N-terminal domain M892_RS09105 PF03719 Ribosomal protein S5, C-terminal domain M892_RS09110 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast M892_RS09115 PF00347 Ribosomal protein L6 M892_RS09120 PF00410 Ribosomal protein S8 M892_RS09125 PF00253 Ribosomal protein S14p/S29e M892_RS09130 PF00673 ribosomal L5P family C-terminus M892_RS09130 PF00281 Ribosomal protein L5 M892_RS09135 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 M892_RS09135 PF00467 KOW motif M892_RS09140 PF00238 Ribosomal protein L14p/L23e M892_RS09145 PF00366 Ribosomal protein S17 M892_RS09150 PF00831 Ribosomal L29 protein M892_RS09155 PF00252 Ribosomal protein L16p/L10e M892_RS09160 PF07650 KH domain M892_RS09160 PF00189 Ribosomal protein S3, C-terminal domain M892_RS09165 PF00237 Ribosomal protein L22p/L17e M892_RS09170 PF00203 Ribosomal protein S19 M892_RS09175 PF00181 Ribosomal Proteins L2, RNA binding domain M892_RS09175 PF03947 Ribosomal Proteins L2, C-terminal domain M892_RS09180 PF00276 Ribosomal protein L23 M892_RS09185 PF00573 Ribosomal protein L4/L1 family M892_RS09190 PF00297 Ribosomal protein L3 M892_RS09195 PF00338 Ribosomal protein S10p/S20e M892_RS09200 PF01197 Ribosomal protein L31 M892_RS09205 PF00271 Helicase conserved C-terminal domain M892_RS09205 PF18319 PriA DNA helicase Cys-rich region (CRR) domain M892_RS09205 PF18074 Primosomal protein N C-terminal domain M892_RS09205 PF17764 3′ DNA-binding domain (3′BD) M892_RS09205 PF00270 DEAD/DEAH box helicase M892_RS09210 PF00356 Bacterial regulatory proteins, lacI family M892_RS09220 PF00227 Proteasome subunit M892_RS09225 PF07724 AAA domain (Cdc48 subfamily) M892_RS09225 PF00004 ATPase family associated with various cellular activities (AAA) M892_RS09230 PF01040 UbiA prenyltransferase family M892_RS09235 PF03737 Aldolase/RraA M892_RS09240 PF06005 Cell division protein ZapB M892_RS09245 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded M892_RS09250 PF00455 DeoR C terminal sensor domain M892_RS09250 PF08220 DeoR-like helix-turn-helix domain M892_RS09260 PF02371 Transposase IS116/IS110/IS902 family M892_RS09260 PF01548 Transposase M892_RS09275 PF00121 Triosephosphate isomerase M892_RS09290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M892_RS09290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M892_RS09290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M892_RS09295 PF00953 Glycosyl transferase family 4 M892_RS09300 PF01238 Phosphomannose isomerase type I M892_RS09305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M892_RS09305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M892_RS09305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M892_RS09305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M892_RS09310 PF01050 Mannose-6-phosphate isomerase M892_RS09310 PF00483 Nucleotidyl transferase M892_RS09325 PF13276 HTH-like domain M892_RS09325 PF13333 Integrase core domain M892_RS09325 PF00665 Integrase core domain M892_RS09370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain M892_RS09370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain M892_RS09370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain M892_RS09375 PF02350 UDP-N-acetylglucosamine 2-epimerase M892_RS09385 PF02563 Polysaccharide biosynthesis/export protein M892_RS09385 PF10531 SLBB domain M892_RS09385 PF18412 Outer-membrane lipoprotein Wza C-terminal domain M892_RS09410 PF06082 Exopolysaccharide biosynthesis protein YbjH M892_RS09415 PF01370 NAD dependent epimerase/dehydratase family M892_RS09420 PF03279 Bacterial lipid A biosynthesis acyltransferase M892_RS09425 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M892_RS09430 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) M892_RS09440 PF02348 Cytidylyltransferase M892_RS09445 PF00483 Nucleotidyl transferase M892_RS09450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M892_RS09450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M892_RS09470 PF02350 UDP-N-acetylglucosamine 2-epimerase M892_RS09475 PF03102 NeuB family M892_RS09475 PF08666 SAF domain M892_RS09490 PF02719 Polysaccharide biosynthesis protein M892_RS09510 PF01219 Prokaryotic diacylglycerol kinase M892_RS09515 PF01075 Glycosyltransferase family 9 (heptosyltransferase) M892_RS09520 PF00535 Glycosyl transferase family 2 M892_RS09525 PF00534 Glycosyl transferases group 1 M892_RS09525 PF13439 Glycosyltransferase Family 4 M892_RS09530 PF01467 Cytidylyltransferase-like M892_RS09535 PF05686 Glycosyl transferase family 90 M892_RS09540 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain M892_RS09540 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain M892_RS09540 PF06827 Zinc finger found in FPG and IleRS M892_RS09550 PF00471 Ribosomal protein L33 M892_RS09555 PF00830 Ribosomal L28 family M892_RS09560 PF04002 RadC-like JAB domain M892_RS09565 PF04127 DNA / pantothenate metabolism flavoprotein M892_RS09565 PF02441 Flavoprotein M892_RS09570 PF00440 Bacterial regulatory proteins, tetR family M892_RS09575 PF03279 Bacterial lipid A biosynthesis acyltransferase M892_RS09580 PF00156 Phosphoribosyl transferase domain M892_RS09585 PF01138 3' exoribonuclease family, domain 1 M892_RS09585 PF03725 3' exoribonuclease family, domain 2 M892_RS09590 PF03755 YicC-like family, N-terminal region M892_RS09590 PF08340 Domain of unknown function (DUF1732) M892_RS09595 PF00892 EamA-like transporter family M892_RS09610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M892_RS09610 PF00005 ABC transporter M892_RS09615 PF00005 ABC transporter M892_RS09615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M892_RS09620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M892_RS09625 PF12911 N-terminal TM domain of oligopeptide transport permease C M892_RS09625 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS09630 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS09635 PF07715 TonB-dependent Receptor Plug Domain M892_RS09635 PF00593 TonB dependent receptor M892_RS09650 PF01618 MotA/TolQ/ExbB proton channel family M892_RS09655 PF02472 Biopolymer transport protein ExbD/TolR M892_RS09670 PF00625 Guanylate kinase M892_RS09680 PF02824 TGS domain M892_RS09680 PF04607 Region found in RelA / SpoT proteins M892_RS09680 PF13291 ACT domain M892_RS09685 PF00588 SpoU rRNA Methylase family M892_RS09685 PF12105 SpoU, rRNA methylase, C-terminal M892_RS09690 PF17191 RecG wedge domain M892_RS09690 PF00271 Helicase conserved C-terminal domain M892_RS09690 PF00270 DEAD/DEAH box helicase M892_RS09695 PF00326 Prolyl oligopeptidase family M892_RS09700 PF00860 Permease family M892_RS09705 PF00512 His Kinase A (phospho-acceptor) domain M892_RS09705 PF00672 HAMP domain M892_RS09705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS09710 PF00072 Response regulator receiver domain M892_RS09710 PF00486 Transcriptional regulatory protein, C terminal M892_RS09715 PF03449 Transcription elongation factor, N-terminal M892_RS09715 PF01272 Transcription elongation factor, GreA/GreB, C-term M892_RS09725 PF17674 HHH domain M892_RS09725 PF16921 Tex protein YqgF-like domain M892_RS09725 PF00575 S1 RNA binding domain M892_RS09725 PF09371 Tex-like protein N-terminal domain M892_RS09735 PF00561 alpha/beta hydrolase fold M892_RS09740 PF00156 Phosphoribosyl transferase domain M892_RS09745 PF01106 NifU-like domain M892_RS09745 PF01521 Iron-sulphur cluster biosynthesis M892_RS09750 PF00293 NUDIX domain M892_RS09755 PF00459 Inositol monophosphatase family M892_RS09760 PF01203 Type II secretion system (T2SS), protein N M892_RS09765 PF04612 Type II secretion system (T2SS), protein M M892_RS09770 PF12693 GspL periplasmic domain M892_RS09770 PF05134 Type II secretion system (T2SS), protein L M892_RS09775 PF03934 Type II secretion system (T2SS), protein K M892_RS09780 PF11612 Type II secretion system (T2SS), protein J M892_RS09780 PF07963 Prokaryotic N-terminal methylation motif M892_RS09785 PF07963 Prokaryotic N-terminal methylation motif M892_RS09785 PF02501 Type II secretion system (T2SS), protein I M892_RS09790 PF12019 Type II transport protein GspH M892_RS09795 PF08334 Type II secretion system (T2SS), protein G M892_RS09795 PF07963 Prokaryotic N-terminal methylation motif M892_RS09800 PF00482 Type II secretion system (T2SS), protein F M892_RS09805 PF00437 Type II/IV secretion system protein M892_RS09810 PF00263 Bacterial type II and III secretion system protein M892_RS09810 PF03958 Bacterial type II/III secretion system short domain M892_RS09815 PF11356 Type II secretion system protein C M892_RS09820 PF01479 S4 domain M892_RS09825 PF01430 Hsp33 protein M892_RS09830 PF01293 Phosphoenolpyruvate carboxykinase M892_RS09840 PF00583 Acetyltransferase (GNAT) family M892_RS09840 PF09500 Putative thioesterase (yiiD_Cterm) M892_RS09845 PF02580 D-Tyr-tRNA(Tyr) deacylase M892_RS09850 PF03631 Virulence factor BrkB M892_RS09865 PF00009 Elongation factor Tu GTP binding domain M892_RS09865 PF03144 Elongation factor Tu domain 2 M892_RS09865 PF00679 Elongation factor G C-terminus M892_RS09875 PF00120 Glutamine synthetase, catalytic domain M892_RS09875 PF03951 Glutamine synthetase, beta-Grasp domain M892_RS09890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS09890 PF00512 His Kinase A (phospho-acceptor) domain M892_RS09890 PF00989 PAS fold M892_RS09895 PF02954 Bacterial regulatory protein, Fis family M892_RS09895 PF00072 Response regulator receiver domain M892_RS09895 PF00158 Sigma-54 interaction domain M892_RS09900 PF03707 Bacterial signalling protein N terminal repeat M892_RS09900 PF00990 Diguanylate cyclase, GGDEF domain M892_RS09900 PF00563 EAL domain M892_RS09905 PF00962 Adenosine/AMP deaminase M892_RS09910 PF06969 HemN C-terminal domain M892_RS09910 PF04055 Radical SAM superfamily M892_RS09915 PF10675 Protein of unknown function (DUF2489) M892_RS09920 PF04220 Der GTPase activator (YihI) M892_RS09930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M892_RS09935 PF01926 50S ribosome-binding GTPase M892_RS09940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain M892_RS09940 PF01367 5'-3' exonuclease, C-terminal SAM fold M892_RS09940 PF00476 DNA polymerase family A M892_RS09940 PF01612 3'-5' exonuclease M892_RS09950 PF00490 Delta-aminolevulinic acid dehydratase M892_RS09955 PF01026 TatD related DNase M892_RS09960 PF00902 Sec-independent protein translocase protein (TatC) M892_RS09965 PF02416 mttA/Hcf106 family M892_RS09970 PF02416 mttA/Hcf106 family M892_RS09975 PF03109 ABC1 family M892_RS09980 PF02036 SCP-2 sterol transfer family M892_RS09985 PF01209 ubiE/COQ5 methyltransferase family M892_RS09990 PF02646 RmuC family M892_RS10000 PF03707 Bacterial signalling protein N terminal repeat M892_RS10000 PF00990 Diguanylate cyclase, GGDEF domain M892_RS10000 PF00563 EAL domain M892_RS10005 PF13006 Insertion element 4 transposase N-terminal M892_RS10005 PF01609 Transposase DDE domain M892_RS10010 PF13340 Putative transposase of IS4/5 family (DUF4096) M892_RS10015 PF12727 PBP superfamily domain M892_RS10015 PF12728 Helix-turn-helix domain M892_RS10050 PF00704 Glycosyl hydrolases family 18 M892_RS10070 PF11570 Coiled-coil receptor-binding R-domain of colicin E2 M892_RS10070 PF03515 Colicin-like bacteriocin tRNase domain M892_RS10075 PF01320 Colicin immunity protein / pyocin immunity protein M892_RS10085 PF13005 zinc-finger binding domain of transposase IS66 M892_RS10085 PF13817 IS66 C-terminal element M892_RS10085 PF03050 Transposase IS66 family M892_RS10085 PF13007 Transposase C of IS166 homeodomain M892_RS10110 PF10625 Universal stress protein B (UspB) M892_RS10115 PF00210 Ferritin-like domain M892_RS10125 PF00582 Universal stress protein family M892_RS10130 PF00892 EamA-like transporter family M892_RS10140 PF04445 Putative SAM-dependent methyltransferase M892_RS10145 PF08448 PAS fold M892_RS10145 PF00990 Diguanylate cyclase, GGDEF domain M892_RS10145 PF00563 EAL domain M892_RS10150 PF01037 Lrp/AsnC ligand binding domain M892_RS10155 PF01432 Peptidase family M3 M892_RS10165 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ M892_RS10175 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS10175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M892_RS10180 PF00313 'Cold-shock' DNA-binding domain M892_RS10195 PF01081 KDPG and KHG aldolase M892_RS10200 PF02447 GntP family permease M892_RS10205 PF01202 Shikimate kinase M892_RS10210 PF00920 Dehydratase family M892_RS10215 PF02371 Transposase IS116/IS110/IS902 family M892_RS10215 PF01548 Transposase M892_RS10220 PF00893 Small Multidrug Resistance protein M892_RS10225 PF00893 Small Multidrug Resistance protein M892_RS10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS10230 PF03466 LysR substrate binding domain M892_RS10235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family M892_RS10235 PF00356 Bacterial regulatory proteins, lacI family M892_RS10240 PF00069 Protein kinase domain M892_RS10265 PF13340 Putative transposase of IS4/5 family (DUF4096) M892_RS10275 PF01609 Transposase DDE domain M892_RS10275 PF02281 Transposase Tn5 dimerisation domain M892_RS10275 PF14706 Transposase DNA-binding M892_RS10280 PF14706 Transposase DNA-binding M892_RS10280 PF01609 Transposase DDE domain M892_RS10280 PF02281 Transposase Tn5 dimerisation domain M892_RS10290 PF12911 N-terminal TM domain of oligopeptide transport permease C M892_RS10290 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS10295 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS10300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M892_RS10305 PF00005 ABC transporter M892_RS10305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M892_RS10315 PF13419 Haloacid dehalogenase-like hydrolase M892_RS10345 PF13442 Cytochrome C oxidase, cbb3-type, subunit III M892_RS10350 PF00580 UvrD/REP helicase N-terminal domain M892_RS10350 PF13361 UvrD-like helicase C-terminal domain M892_RS10355 PF16295 Tetracyclin repressor-like, C-terminal domain M892_RS10355 PF00440 Bacterial regulatory proteins, tetR family M892_RS10360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M892_RS10365 PF00873 AcrB/AcrD/AcrF family M892_RS10370 PF04380 Membrane fusogenic activity M892_RS10375 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain M892_RS10375 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain M892_RS10380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS10380 PF03466 LysR substrate binding domain M892_RS10390 PF13358 DDE superfamily endonuclease M892_RS10395 PF13358 DDE superfamily endonuclease M892_RS10420 PF12724 Flavodoxin domain M892_RS10425 PF02386 Cation transport protein M892_RS10430 PF09186 Domain of unknown function (DUF1949) M892_RS10430 PF01205 Uncharacterized protein family UPF0029 M892_RS10435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain M892_RS10435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain M892_RS10435 PF00378 Enoyl-CoA hydratase/isomerase M892_RS10440 PF00108 Thiolase, N-terminal domain M892_RS10440 PF02803 Thiolase, C-terminal domain M892_RS10445 PF08240 Alcohol dehydrogenase GroES-like domain M892_RS10445 PF00107 Zinc-binding dehydrogenase M892_RS10450 PF01609 Transposase DDE domain M892_RS10450 PF02281 Transposase Tn5 dimerisation domain M892_RS10450 PF14706 Transposase DNA-binding M892_RS10455 PF01609 Transposase DDE domain M892_RS10455 PF02281 Transposase Tn5 dimerisation domain M892_RS10455 PF14706 Transposase DNA-binding M892_RS10460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS10460 PF03466 LysR substrate binding domain M892_RS10470 PF01206 Sulfurtransferase TusA M892_RS10480 PF01169 Uncharacterized protein family UPF0016 M892_RS10485 PF02091 Glycyl-tRNA synthetase alpha subunit M892_RS10490 PF05746 DALR anticodon binding domain M892_RS10490 PF02092 Glycyl-tRNA synthetase beta subunit M892_RS10495 PF01609 Transposase DDE domain M892_RS10495 PF13006 Insertion element 4 transposase N-terminal M892_RS10500 PF00155 Aminotransferase class I and II M892_RS10505 PF00011 Hsp20/alpha crystallin family M892_RS10510 PF18053 DNA gyrase B subunit insert domain M892_RS10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS10510 PF01751 Toprim domain M892_RS10510 PF00204 DNA gyrase B M892_RS10510 PF00986 DNA gyrase B subunit, carboxyl terminus M892_RS10515 PF02463 RecF/RecN/SMC N terminal domain M892_RS10520 PF02768 DNA polymerase III beta subunit, C-terminal domain M892_RS10520 PF02767 DNA polymerase III beta subunit, central domain M892_RS10520 PF00712 DNA polymerase III beta subunit, N-terminal domain M892_RS10525 PF11638 DnaA N-terminal domain M892_RS10525 PF08299 Bacterial dnaA protein helix-turn-helix M892_RS10525 PF00308 Bacterial dnaA protein M892_RS10530 PF00497 Bacterial extracellular solute-binding proteins, family 3 M892_RS10535 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS10545 PF00468 Ribosomal protein L34 M892_RS10550 PF00825 Ribonuclease P M892_RS10555 PF14849 YidC periplasmic domain M892_RS10555 PF02096 60Kd inner membrane protein M892_RS10560 PF12631 MnmE helical domain M892_RS10560 PF10396 GTP-binding protein TrmE N-terminus M892_RS10560 PF01926 50S ribosome-binding GTPase M892_RS10565 PF00258 Flavodoxin M892_RS10570 PF13932 GidA associated domain M892_RS10570 PF01134 Glucose inhibited division protein A M892_RS10575 PF02527 rRNA small subunit methyltransferase G M892_RS10580 PF13614 AAA domain M892_RS10585 PF17762 HTH domain found in ParB protein M892_RS10585 PF02195 ParB-like nuclease domain M892_RS10590 PF03899 ATP synthase I chain M892_RS10595 PF00119 ATP synthase A chain M892_RS10600 PF00137 ATP synthase subunit C M892_RS10605 PF00430 ATP synthase B/B' CF(0) M892_RS10610 PF00213 ATP synthase delta (OSCP) subunit M892_RS10615 PF00306 ATP synthase alpha/beta chain, C terminal domain M892_RS10615 PF02874 ATP synthase alpha/beta family, beta-barrel domain M892_RS10615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M892_RS10620 PF00231 ATP synthase M892_RS10625 PF02874 ATP synthase alpha/beta family, beta-barrel domain M892_RS10625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M892_RS10630 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M892_RS10630 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain M892_RS10635 PF12804 MobA-like NTP transferase domain M892_RS10635 PF00132 Bacterial transferase hexapeptide (six repeats) M892_RS10640 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS10645 PF00497 Bacterial extracellular solute-binding proteins, family 3 M892_RS10650 PF07690 Major Facilitator Superfamily M892_RS10655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS10655 PF03466 LysR substrate binding domain M892_RS10660 PF00585 C-terminal regulatory domain of Threonine dehydratase M892_RS10660 PF00291 Pyridoxal-phosphate dependent enzyme M892_RS10665 PF00920 Dehydratase family M892_RS10670 PF01063 Amino-transferase class IV M892_RS10680 PF00205 Thiamine pyrophosphate enzyme, central domain M892_RS10680 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M892_RS10680 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M892_RS10685 PF13335 Magnesium chelatase, subunit ChlI C-terminal M892_RS10685 PF01078 Magnesium chelatase, subunit ChlI M892_RS10690 PF17152 Periplasmic sensor domain M892_RS10690 PF00990 Diguanylate cyclase, GGDEF domain M892_RS10700 PF01553 Acyltransferase M892_RS10705 PF01609 Transposase DDE domain M892_RS10705 PF13006 Insertion element 4 transposase N-terminal M892_RS10710 PF01323 DSBA-like thioredoxin domain M892_RS10715 PF01636 Phosphotransferase enzyme family M892_RS10720 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase M892_RS10720 PF12801 4Fe-4S binding domain M892_RS10720 PF13746 4Fe-4S dicluster domain M892_RS10725 PF06288 Protein of unknown function (DUF1040) M892_RS10730 PF07070 SpoOM protein M892_RS10735 PF03006 Haemolysin-III related M892_RS10745 PF02386 Cation transport protein M892_RS10750 PF02080 TrkA-C domain M892_RS10750 PF02254 TrkA-N domain M892_RS10755 PF01029 NusB family M892_RS10755 PF01189 16S rRNA methyltransferase RsmB/F M892_RS10760 PF00551 Formyl transferase M892_RS10760 PF02911 Formyl transferase, C-terminal domain M892_RS10765 PF01327 Polypeptide deformylase M892_RS10775 PF02481 DNA recombination-mediator protein A M892_RS10775 PF17782 DprA winged helix domain M892_RS10780 PF04361 Protein of unknown function (DUF494) M892_RS10790 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain M892_RS10790 PF02222 ATP-grasp domain M892_RS10795 PF00731 AIR carboxylase M892_RS10800 PF01300 Telomere recombination M892_RS10805 PF01218 Coproporphyrinogen III oxidase M892_RS10810 PF01488 Shikimate / quinate 5-dehydrogenase M892_RS10810 PF18317 Shikimate 5'-dehydrogenase C-terminal domain M892_RS10810 PF08501 Shikimate dehydrogenase substrate binding domain M892_RS10820 PF00132 Bacterial transferase hexapeptide (six repeats) M892_RS10860 PF13358 DDE superfamily endonuclease M892_RS10870 PF00394 Multicopper oxidase M892_RS10870 PF07731 Multicopper oxidase M892_RS10870 PF07732 Multicopper oxidase M892_RS10875 PF02537 CrcB-like protein, Camphor Resistance (CrcB) M892_RS10880 PF13667 ThiC-associated domain M892_RS10880 PF01964 Radical SAM ThiC family M892_RS10885 PF02581 Thiamine monophosphate synthase M892_RS10890 PF00899 ThiF family M892_RS10895 PF02597 ThiS family M892_RS10900 PF05690 Thiazole biosynthesis protein ThiG M892_RS10905 PF04055 Radical SAM superfamily M892_RS10905 PF06968 Biotin and Thiamin Synthesis associated domain M892_RS10910 PF01321 Creatinase/Prolidase N-terminal domain M892_RS10910 PF01321 Creatinase/Prolidase N-terminal domain M892_RS10910 PF00557 Metallopeptidase family M24 M892_RS10910 PF00557 Metallopeptidase family M24 M892_RS10915 PF03466 LysR substrate binding domain M892_RS10915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS10920 PF07690 Major Facilitator Superfamily M892_RS10940 PF05114 Protein of unknown function (DUF692) M892_RS10950 PF13361 UvrD-like helicase C-terminal domain M892_RS10950 PF00580 UvrD/REP helicase N-terminal domain M892_RS10955 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS10965 PF01810 LysE type translocator M892_RS10975 PF00892 EamA-like transporter family M892_RS10980 PF16124 RecQ zinc-binding M892_RS10980 PF09382 RQC domain M892_RS10980 PF00271 Helicase conserved C-terminal domain M892_RS10980 PF00270 DEAD/DEAH box helicase M892_RS10980 PF00570 HRDC domain M892_RS10990 PF02592 Putative vitamin uptake transporter M892_RS10995 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS11000 PF02541 Ppx/GppA phosphatase family M892_RS11005 PF00270 DEAD/DEAH box helicase M892_RS11005 PF00271 Helicase conserved C-terminal domain M892_RS11010 PF00085 Thioredoxin M892_RS11015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M892_RS11015 PF07497 Rho termination factor, RNA-binding domain M892_RS11015 PF07498 Rho termination factor, N-terminal domain M892_RS11025 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase M892_RS11030 PF00111 2Fe-2S iron-sulfur cluster binding domain M892_RS11035 PF00175 Oxidoreductase NAD-binding domain M892_RS11070 PF13358 DDE superfamily endonuclease M892_RS11080 PF07219 HemY protein N-terminus M892_RS11085 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase M892_RS11090 PF02602 Uroporphyrinogen-III synthase HemD M892_RS11095 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain M892_RS11095 PF03900 Porphobilinogen deaminase, C-terminal domain M892_RS11100 PF12633 Adenylate cyclase NT domain M892_RS11100 PF01295 Adenylate cyclase, class-I M892_RS11105 PF01491 Frataxin-like domain M892_RS11115 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M892_RS11115 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain M892_RS11120 PF01678 Diaminopimelate epimerase M892_RS11130 PF00589 Phage integrase family M892_RS11130 PF02899 Phage integrase, N-terminal SAM-like domain M892_RS11135 PF13419 Haloacid dehalogenase-like hydrolase M892_RS11140 PF08495 FIST N domain M892_RS11140 PF10442 FIST C domain M892_RS11140 PF00990 Diguanylate cyclase, GGDEF domain M892_RS11140 PF00563 EAL domain M892_RS11145 PF03942 DTW domain M892_RS11165 PF12146 Serine aminopeptidase, S33 M892_RS11170 PF01810 LysE type translocator M892_RS11175 PF00563 EAL domain M892_RS11175 PF08668 HDOD domain M892_RS11180 PF01022 Bacterial regulatory protein, arsR family M892_RS11185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M892_RS11185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M892_RS11200 PF02281 Transposase Tn5 dimerisation domain M892_RS11200 PF01609 Transposase DDE domain M892_RS11200 PF14706 Transposase DNA-binding M892_RS11215 PF10694 Protein of unknown function (DUF2500) M892_RS11220 PF13340 Putative transposase of IS4/5 family (DUF4096) M892_RS11240 PF01914 MarC family integral membrane protein M892_RS11255 PF00448 SRP54-type protein, GTPase domain M892_RS11255 PF02881 SRP54-type protein, helical bundle domain M892_RS11260 PF00005 ABC transporter M892_RS11265 PF18075 FtsX extracellular domain M892_RS11270 PF04542 Sigma-70 region 2 M892_RS11270 PF00140 Sigma-70 factor, region 1.2 M892_RS11270 PF04545 Sigma-70, region 4 M892_RS11275 PF00581 Rhodanese-like domain M892_RS11280 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease M892_RS11280 PF01694 Rhomboid family M892_RS11285 PF03748 Flagellar basal body-associated protein FliL M892_RS11290 PF04345 Chorismate lyase M892_RS11295 PF01040 UbiA prenyltransferase family M892_RS11305 PF01553 Acyltransferase M892_RS11310 PF00717 Peptidase S24-like M892_RS11310 PF01726 LexA DNA binding domain M892_RS11320 PF01554 MatE M892_RS11325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M892_RS11325 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS11330 PF00440 Bacterial regulatory proteins, tetR family M892_RS11340 PF05958 tRNA (Uracil-5-)-methyltransferase M892_RS11345 PF07715 TonB-dependent Receptor Plug Domain M892_RS11345 PF00593 TonB dependent receptor M892_RS11360 PF01177 Asp/Glu/Hydantoin racemase M892_RS11415 PF13091 PLD-like domain M892_RS11425 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain M892_RS11425 PF01565 FAD binding domain M892_RS11430 PF03099 Biotin/lipoate A/B protein ligase family M892_RS11430 PF02237 Biotin protein ligase C terminal domain M892_RS11430 PF08279 HTH domain M892_RS11435 PF00485 Phosphoribulokinase / Uridine kinase family M892_RS11470 PF00584 SecE/Sec61-gamma subunits of protein translocation complex M892_RS11475 PF00467 KOW motif M892_RS11475 PF02357 Transcription termination factor nusG M892_RS11480 PF00298 Ribosomal protein L11, RNA binding domain M892_RS11480 PF03946 Ribosomal protein L11, N-terminal domain M892_RS11485 PF00687 Ribosomal protein L1p/L10e family M892_RS11490 PF00466 Ribosomal protein L10 M892_RS11495 PF00542 Ribosomal protein L7/L12 C-terminal domain M892_RS11495 PF16320 Ribosomal protein L7/L12 dimerisation domain M892_RS11500 PF04565 RNA polymerase Rpb2, domain 3 M892_RS11500 PF10385 RNA polymerase beta subunit external 1 domain M892_RS11500 PF04561 RNA polymerase Rpb2, domain 2 M892_RS11500 PF04563 RNA polymerase beta subunit M892_RS11500 PF04560 RNA polymerase Rpb2, domain 7 M892_RS11500 PF00562 RNA polymerase Rpb2, domain 6 M892_RS11505 PF04983 RNA polymerase Rpb1, domain 3 M892_RS11505 PF04997 RNA polymerase Rpb1, domain 1 M892_RS11505 PF05000 RNA polymerase Rpb1, domain 4 M892_RS11505 PF00623 RNA polymerase Rpb1, domain 2 M892_RS11505 PF04998 RNA polymerase Rpb1, domain 5 M892_RS11510 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ M892_RS11515 PF00293 NUDIX domain M892_RS11515 PF09297 NADH pyrophosphatase zinc ribbon domain M892_RS11530 PF01208 Uroporphyrinogen decarboxylase (URO-D) M892_RS11535 PF03167 Uracil DNA glycosylase superfamily M892_RS11540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M892_RS11545 PF04222 Protein of unknown function (DUF416) M892_RS11550 PF00571 CBS domain M892_RS11550 PF01595 Cyclin M transmembrane N-terminal domain M892_RS11555 PF00216 Bacterial DNA-binding protein M892_RS11565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain M892_RS11565 PF02843 Phosphoribosylglycinamide synthetase, C domain M892_RS11565 PF02844 Phosphoribosylglycinamide synthetase, N domain M892_RS11570 PF02142 MGS-like domain M892_RS11570 PF01808 AICARFT/IMPCHase bienzyme M892_RS11575 PF13411 MerR HTH family regulatory protein M892_RS11580 PF00486 Transcriptional regulatory protein, C terminal M892_RS11580 PF18500 CadC C-terminal domain 1 M892_RS11585 PF13520 Amino acid permease M892_RS11590 PF01276 Orn/Lys/Arg decarboxylase, major domain M892_RS11590 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain M892_RS11590 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain M892_RS11645 PF13358 DDE superfamily endonuclease M892_RS11650 PF13358 DDE superfamily endonuclease M892_RS11655 PF13358 DDE superfamily endonuclease M892_RS11665 PF13358 DDE superfamily endonuclease M892_RS11670 PF01695 IstB-like ATP binding protein M892_RS11675 PF00665 Integrase core domain M892_RS11690 PF13817 IS66 C-terminal element M892_RS11690 PF13007 Transposase C of IS166 homeodomain M892_RS11690 PF13005 zinc-finger binding domain of transposase IS66 M892_RS11690 PF03050 Transposase IS66 family M892_RS11700 PF00990 Diguanylate cyclase, GGDEF domain M892_RS11700 PF08448 PAS fold M892_RS11705 PF02954 Bacterial regulatory protein, Fis family M892_RS11710 PF01207 Dihydrouridine synthase (Dus) M892_RS11720 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain M892_RS11720 PF02785 Biotin carboxylase C-terminal domain M892_RS11720 PF00289 Biotin carboxylase, N-terminal domain M892_RS11725 PF00364 Biotin-requiring enzyme M892_RS11730 PF01220 Dehydroquinase class II M892_RS11735 PF16177 Acetyl-coenzyme A synthetase N-terminus M892_RS11735 PF00501 AMP-binding enzyme M892_RS11735 PF13193 AMP-binding enzyme C-terminal domain M892_RS11750 PF12832 MFS_1 like family M892_RS11755 PF09308 LuxQ, periplasmic M892_RS11755 PF00072 Response regulator receiver domain M892_RS11755 PF00512 His Kinase A (phospho-acceptor) domain M892_RS11755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS11760 PF00206 Lyase M892_RS11760 PF10415 Fumarase C C-terminus M892_RS11775 PF00474 Sodium:solute symporter family M892_RS11785 PF01914 MarC family integral membrane protein M892_RS11790 PF00072 Response regulator receiver domain M892_RS11790 PF00196 Bacterial regulatory proteins, luxR family M892_RS11795 PF11412 Disulphide bond corrector protein DsbC M892_RS11795 PF02683 Cytochrome C biogenesis protein transmembrane region M892_RS11800 PF03605 Anaerobic c4-dicarboxylate membrane transporter M892_RS11805 PF00206 Lyase M892_RS11805 PF10415 Fumarase C C-terminus M892_RS11810 PF04186 FxsA cytoplasmic membrane protein M892_RS11815 PF00588 SpoU rRNA Methylase family M892_RS11820 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M892_RS11820 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M892_RS11825 PF16527 Two-component sensor protein CpxA, periplasmic domain M892_RS11825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS11825 PF00512 His Kinase A (phospho-acceptor) domain M892_RS11825 PF00672 HAMP domain M892_RS11830 PF00486 Transcriptional regulatory protein, C terminal M892_RS11830 PF00072 Response regulator receiver domain M892_RS11850 PF16916 Dimerisation domain of Zinc Transporter M892_RS11850 PF01545 Cation efflux family M892_RS11855 PF00365 Phosphofructokinase M892_RS11860 PF01554 MatE M892_RS11865 PF00166 Chaperonin 10 Kd subunit M892_RS11870 PF00118 TCP-1/cpn60 chaperonin family M892_RS11875 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS11885 PF02308 MgtC family M892_RS11890 PF04055 Radical SAM superfamily M892_RS11895 PF09285 Elongation factor P, C-terminal M892_RS11895 PF08207 Elongation factor P (EF-P) KOW-like domain M892_RS11895 PF01132 Elongation factor P (EF-P) OB domain M892_RS11910 PF02313 Fumarate reductase subunit D M892_RS11915 PF02300 Fumarate reductase subunit C M892_RS11920 PF13183 4Fe-4S dicluster domain M892_RS11920 PF13085 2Fe-2S iron-sulfur cluster binding domain M892_RS11925 PF00890 FAD binding domain M892_RS11925 PF02910 Fumarate reductase flavoprotein C-term M892_RS11930 PF00152 tRNA synthetases class II (D, K and N) M892_RS11940 PF08360 QacR-like protein, C-terminal region M892_RS11940 PF00440 Bacterial regulatory proteins, tetR family M892_RS11950 PF01551 Peptidase family M23 M892_RS11955 PF00132 Bacterial transferase hexapeptide (six repeats) M892_RS11955 PF06426 Serine acetyltransferase, N-terminal M892_RS11960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus M892_RS11960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus M892_RS11965 PF02556 Preprotein translocase subunit SecB M892_RS11970 PF00581 Rhodanese-like domain M892_RS11975 PF01676 Metalloenzyme superfamily M892_RS11975 PF06415 BPG-independent PGAM N-terminus (iPGM_N) M892_RS11985 PF00672 HAMP domain M892_RS11985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS11985 PF02743 Cache domain M892_RS11990 PF00939 Sodium:sulfate symporter transmembrane region M892_RS12000 PF02281 Transposase Tn5 dimerisation domain M892_RS12000 PF14706 Transposase DNA-binding M892_RS12000 PF01609 Transposase DDE domain M892_RS12005 PF02666 Phosphatidylserine decarboxylase M892_RS12010 PF03193 RsgA GTPase M892_RS12015 PF00929 Exonuclease M892_RS12080 PF08331 Domain of unknown function (DUF1730) M892_RS12085 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE M892_RS12090 PF01520 N-acetylmuramoyl-L-alanine amidase M892_RS12095 PF08676 MutL C terminal dimerisation domain M892_RS12095 PF01119 DNA mismatch repair protein, C-terminal domain M892_RS12105 PF17209 Hfq protein M892_RS12110 PF13167 GTP-binding GTPase N-terminal M892_RS12110 PF16360 GTP-binding GTPase Middle Region M892_RS12110 PF01926 50S ribosome-binding GTPase M892_RS12115 PF01145 SPFH domain / Band 7 family M892_RS12115 PF12221 Bacterial membrane protein N terminal M892_RS12120 PF01145 SPFH domain / Band 7 family M892_RS12125 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) M892_RS12130 PF00709 Adenylosuccinate synthetase M892_RS12135 PF08238 Sel1 repeat M892_RS12140 PF00175 Oxidoreductase NAD-binding domain M892_RS12140 PF00970 Oxidoreductase FAD-binding domain M892_RS12140 PF00042 Globin M892_RS12145 PF02082 Transcriptional regulator M892_RS12150 PF08206 Ribonuclease B OB domain M892_RS12150 PF17876 Cold shock domain M892_RS12150 PF00575 S1 RNA binding domain M892_RS12150 PF08461 Ribonuclease R winged-helix domain M892_RS12150 PF00773 RNB domain M892_RS12155 PF00588 SpoU rRNA Methylase family M892_RS12155 PF08032 RNA 2'-O ribose methyltransferase substrate binding M892_RS12160 PF13419 Haloacid dehalogenase-like hydrolase M892_RS12165 PF00579 tRNA synthetases class I (W and Y) M892_RS12175 PF00117 Glutamine amidotransferase class-I M892_RS12180 PF00202 Aminotransferase class-III M892_RS12185 PF04958 Arginine N-succinyltransferase beta subunit M892_RS12190 PF00171 Aldehyde dehydrogenase family M892_RS12200 PF13545 Crp-like helix-turn-helix domain M892_RS12200 PF00027 Cyclic nucleotide-binding domain M892_RS12205 PF00485 Phosphoribulokinase / Uridine kinase family M892_RS12210 PF06794 Uncharacterised protein family (UPF0270) M892_RS12215 PF00561 alpha/beta hydrolase fold M892_RS12225 PF00005 ABC transporter M892_RS12225 PF12848 ABC transporter M892_RS12230 PF02525 Flavodoxin-like fold M892_RS12235 PF02254 TrkA-N domain M892_RS12235 PF00999 Sodium/hydrogen exchanger family M892_RS12245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M892_RS12250 PF01112 Asparaginase M892_RS12255 PF04102 SlyX M892_RS12265 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase M892_RS12265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase M892_RS12270 PF13309 HTH domain M892_RS12270 PF08348 YheO-like PAS domain M892_RS12275 PF02635 DsrE/DsrF-like family M892_RS12280 PF02635 DsrE/DsrF-like family M892_RS12285 PF04077 DsrH like protein M892_RS12290 PF00164 Ribosomal protein S12/S23 M892_RS12295 PF00177 Ribosomal protein S7p/S5e M892_RS12300 PF03144 Elongation factor Tu domain 2 M892_RS12300 PF00679 Elongation factor G C-terminus M892_RS12300 PF00009 Elongation factor Tu GTP binding domain M892_RS12300 PF03764 Elongation factor G, domain IV M892_RS12300 PF14492 Elongation Factor G, domain II M892_RS12320 PF00009 Elongation factor Tu GTP binding domain M892_RS12320 PF03144 Elongation factor Tu domain 2 M892_RS12320 PF03143 Elongation factor Tu C-terminal domain M892_RS12325 PF04324 BFD-like [2Fe-2S] binding domain M892_RS12330 PF00210 Ferritin-like domain M892_RS12335 PF03949 Malic enzyme, NAD binding domain M892_RS12335 PF00390 Malic enzyme, N-terminal domain M892_RS12340 PF01340 Met Apo-repressor, MetJ M892_RS12345 PF01053 Cys/Met metabolism PLP-dependent enzyme M892_RS12350 PF03447 Homoserine dehydrogenase, NAD binding domain M892_RS12350 PF00696 Amino acid kinase family M892_RS12350 PF00742 Homoserine dehydrogenase M892_RS12355 PF02219 Methylenetetrahydrofolate reductase M892_RS12365 PF00311 Phosphoenolpyruvate carboxylase M892_RS12370 PF07687 Peptidase dimerisation domain M892_RS12370 PF01546 Peptidase family M20/M25/M40 M892_RS12375 PF01118 Semialdehyde dehydrogenase, NAD binding domain M892_RS12375 PF02774 Semialdehyde dehydrogenase, dimerisation domain M892_RS12380 PF00696 Amino acid kinase family M892_RS12385 PF00764 Arginosuccinate synthase M892_RS12390 PF14698 Argininosuccinate lyase C-terminal M892_RS12390 PF00583 Acetyltransferase (GNAT) family M892_RS12390 PF00206 Lyase M892_RS12400 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS12400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M892_RS12405 PF00462 Glutaredoxin M892_RS12405 PF08534 Redoxin M892_RS12410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS12410 PF03466 LysR substrate binding domain M892_RS12415 PF00905 Penicillin binding protein transpeptidase domain M892_RS12415 PF17092 Penicillin-binding protein OB-like domain M892_RS12415 PF00912 Transglycosylase M892_RS12435 PF04351 Pilus assembly protein, PilP M892_RS12440 PF03958 Bacterial type II/III secretion system short domain M892_RS12440 PF07660 Secretin and TonB N terminus short domain M892_RS12440 PF11741 AMIN domain M892_RS12440 PF00263 Bacterial type II and III secretion system protein M892_RS12445 PF01202 Shikimate kinase M892_RS12450 PF01761 3-dehydroquinate synthase M892_RS12460 PF02086 D12 class N6 adenine-specific DNA methyltransferase M892_RS12465 PF00834 Ribulose-phosphate 3 epimerase family M892_RS12470 PF01250 Ribosomal protein S6 M892_RS12475 PF00436 Single-strand binding protein family M892_RS12480 PF01084 Ribosomal protein S18 M892_RS12485 PF01281 Ribosomal protein L9, N-terminal domain M892_RS12485 PF03948 Ribosomal protein L9, C-terminal domain M892_RS12495 PF00772 DnaB-like helicase N terminal domain M892_RS12495 PF03796 DnaB-like helicase C terminal domain M892_RS12500 PF01168 Alanine racemase, N-terminal domain M892_RS12500 PF00842 Alanine racemase, C-terminal domain M892_RS12505 PF13006 Insertion element 4 transposase N-terminal M892_RS12505 PF01609 Transposase DDE domain M892_RS12515 PF01894 Uncharacterised protein family UPF0047 M892_RS12520 PF00342 Phosphoglucose isomerase M892_RS12530 PF01475 Ferric uptake regulator family M892_RS12535 PF01207 Dihydrouridine synthase (Dus) M892_RS12555 PF00175 Oxidoreductase NAD-binding domain M892_RS12555 PF00667 FAD binding domain M892_RS12555 PF00258 Flavodoxin M892_RS12560 PF01077 Nitrite and sulphite reductase 4Fe-4S domain M892_RS12560 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain M892_RS12565 PF01507 Phosphoadenosine phosphosulfate reductase family M892_RS12590 PF13358 DDE superfamily endonuclease M892_RS12600 PF00999 Sodium/hydrogen exchanger family M892_RS12605 PF00809 Pterin binding enzyme M892_RS12605 PF02965 Vitamin B12 dependent methionine synthase, activation domain M892_RS12605 PF02607 B12 binding domain M892_RS12605 PF02310 B12 binding domain M892_RS12605 PF02574 Homocysteine S-methyltransferase M892_RS12610 PF01842 ACT domain M892_RS12610 PF00696 Amino acid kinase family M892_RS12615 PF00266 Aminotransferase class-V M892_RS12625 PF00005 ABC transporter M892_RS12625 PF17755 UvrA DNA-binding domain M892_RS12625 PF17760 UvrA interaction domain M892_RS12630 PF00483 Nucleotidyl transferase M892_RS12635 PF00196 Bacterial regulatory proteins, luxR family M892_RS12640 PF00436 Single-strand binding protein family M892_RS12650 PF17157 Gammaproteobacterial periplasmic sensor domain M892_RS12650 PF00563 EAL domain M892_RS12650 PF00990 Diguanylate cyclase, GGDEF domain M892_RS12670 PF03958 Bacterial type II/III secretion system short domain M892_RS12670 PF00263 Bacterial type II and III secretion system protein M892_RS12675 PF01471 Putative peptidoglycan binding domain M892_RS12675 PF13401 AAA domain M892_RS12685 PF00437 Type II/IV secretion system protein M892_RS12685 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain M892_RS12690 PF00482 Type II secretion system (T2SS), protein F M892_RS12700 PF00114 Pilin (bacterial filament) M892_RS12700 PF07963 Prokaryotic N-terminal methylation motif M892_RS12715 PF07963 Prokaryotic N-terminal methylation motif M892_RS12740 PF04085 rod shape-determining protein MreC M892_RS12745 PF04093 rod shape-determining protein MreD M892_RS12750 PF02545 Maf-like protein M892_RS12755 PF00575 S1 RNA binding domain M892_RS12755 PF10150 Ribonuclease E/G family M892_RS12760 PF13502 AsmA-like C-terminal region M892_RS12760 PF13116 Protein of unknown function M892_RS12765 PF00795 Carbon-nitrogen hydrolase M892_RS12770 PF01523 Putative modulator of DNA gyrase M892_RS12775 PF02562 PhoH-like protein M892_RS12775 PF13638 PIN domain M892_RS12780 PF12137 RNA polymerase recycling family C-terminal M892_RS12780 PF00271 Helicase conserved C-terminal domain M892_RS12780 PF18337 RapA N-terminal Tudor like domain M892_RS12780 PF18339 RapA N-terminal Tudor like domain 1 M892_RS12780 PF00176 SNF2 family N-terminal domain M892_RS12790 PF00849 RNA pseudouridylate synthase M892_RS12795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M892_RS12795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M892_RS12800 PF04751 Protein of unknown function (DUF615) M892_RS12805 PF01523 Putative modulator of DNA gyrase M892_RS12810 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS12815 PF00571 CBS domain M892_RS12815 PF01769 Divalent cation transporter M892_RS12815 PF03448 MgtE intracellular N domain M892_RS12820 PF00381 PTS HPr component phosphorylation site M892_RS12825 PF03668 P-loop ATPase protein family M892_RS12830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 M892_RS12835 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein M892_RS12840 PF04963 Sigma-54 factor, core binding domain M892_RS12840 PF00309 Sigma-54 factor, Activator interacting domain (AID) M892_RS12840 PF04552 Sigma-54, DNA binding domain M892_RS12850 PF03968 OstA-like protein M892_RS12860 PF00571 CBS domain M892_RS12860 PF01380 SIS domain M892_RS12865 PF01699 Sodium/calcium exchanger protein M892_RS12870 PF00005 ABC transporter M892_RS12875 PF02405 Permease MlaE M892_RS12880 PF02470 MlaD protein M892_RS12885 PF05494 MlaC protein M892_RS12895 PF01722 BolA-like protein M892_RS12900 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) M892_RS12905 PF01553 Acyltransferase M892_RS12910 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS12915 PF01042 Endoribonuclease L-PSP M892_RS12920 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain M892_RS12920 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain M892_RS12925 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M892_RS12925 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M892_RS12930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain M892_RS12930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain M892_RS12940 PF06877 Regulator of ribonuclease activity B M892_RS12950 PF00583 Acetyltransferase (GNAT) family M892_RS12960 PF08264 Anticodon-binding domain of tRNA M892_RS12960 PF00133 tRNA synthetases class I (I, L, M and V) M892_RS12960 PF10458 Valyl tRNA synthetase tRNA binding arm M892_RS12965 PF04364 DNA polymerase III chi subunit, HolC M892_RS12970 PF00883 Cytosol aminopeptidase family, catalytic domain M892_RS12970 PF02789 Cytosol aminopeptidase family, N-terminal domain M892_RS12975 PF03739 Lipopolysaccharide export system permease LptF/LptG M892_RS12980 PF03739 Lipopolysaccharide export system permease LptF/LptG M892_RS12990 PF00106 short chain dehydrogenase M892_RS13010 PF01522 Polysaccharide deacetylase M892_RS13015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit M892_RS13020 PF02378 Phosphotransferase system, EIIC M892_RS13025 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit M892_RS13030 PF02056 Family 4 glycosyl hydrolase M892_RS13030 PF11975 Family 4 glycosyl hydrolase C-terminal domain M892_RS13035 PF04794 YdjC-like protein M892_RS13040 PF00356 Bacterial regulatory proteins, lacI family M892_RS13045 PF00072 Response regulator receiver domain M892_RS13080 PF00171 Aldehyde dehydrogenase family M892_RS13110 PF01464 Transglycosylase SLT domain M892_RS13110 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M892_RS13115 PF04362 Bacterial Fe(2+) trafficking M892_RS13120 PF00633 Helix-hairpin-helix motif M892_RS13120 PF14815 NUDIX domain M892_RS13120 PF00730 HhH-GPD superfamily base excision DNA repair protein M892_RS13125 PF02390 Putative methyltransferase M892_RS13130 PF02086 D12 class N6 adenine-specific DNA methyltransferase M892_RS13135 PF04960 Glutaminase M892_RS13155 PF06969 HemN C-terminal domain M892_RS13155 PF04055 Radical SAM superfamily M892_RS13160 PF01725 Ham1 family M892_RS13170 PF02594 Uncharacterised ACR, YggU family COG1872 M892_RS13175 PF02325 YGGT family M892_RS13180 PF03807 NADP oxidoreductase coenzyme F420-dependent M892_RS13180 PF14748 Pyrroline-5-carboxylate reductase dimerisation M892_RS13185 PF01168 Alanine racemase, N-terminal domain M892_RS13190 PF00437 Type II/IV secretion system protein M892_RS13195 PF00437 Type II/IV secretion system protein M892_RS13200 PF03652 Holliday junction resolvase M892_RS13205 PF02622 Uncharacterized ACR, COG1678 M892_RS13210 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain M892_RS13210 PF02951 Prokaryotic glutathione synthetase, N-terminal domain M892_RS13215 PF04452 RNA methyltransferase M892_RS13220 PF04231 Endonuclease I M892_RS13225 PF17283 SprT-like zinc ribbon domain M892_RS13225 PF10263 SprT-like family M892_RS13235 PF02773 S-adenosylmethionine synthetase, C-terminal domain M892_RS13235 PF00438 S-adenosylmethionine synthetase, N-terminal domain M892_RS13235 PF02772 S-adenosylmethionine synthetase, central domain M892_RS13240 PF00456 Transketolase, thiamine diphosphate binding domain M892_RS13240 PF02780 Transketolase, C-terminal domain M892_RS13240 PF02779 Transketolase, pyrimidine binding domain M892_RS13250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M892_RS13250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M892_RS13255 PF00162 Phosphoglycerate kinase M892_RS13260 PF01116 Fructose-bisphosphate aldolase class-II M892_RS13265 PF00924 Mechanosensitive ion channel M892_RS13265 PF05552 Conserved TM helix M892_RS13275 PF01810 LysE type translocator M892_RS13280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS13280 PF03466 LysR substrate binding domain M892_RS13285 PF04402 Protein of unknown function (DUF541) M892_RS13290 PF01842 ACT domain M892_RS13290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M892_RS13290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M892_RS13295 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) M892_RS13300 PF01812 5-formyltetrahydrofolate cyclo-ligase family M892_RS13305 PF05164 Cell division protein ZapA M892_RS13310 PF03695 Uncharacterised protein family (UPF0149) M892_RS13315 PF01494 FAD binding domain M892_RS13320 PF01494 FAD binding domain M892_RS13340 PF03937 Flavinator of succinate dehydrogenase M892_RS13350 PF02910 Fumarate reductase flavoprotein C-term M892_RS13350 PF00890 FAD binding domain M892_RS13355 PF04542 Sigma-70 region 2 M892_RS13355 PF08281 Sigma-70, region 4 M892_RS13360 PF03873 Anti sigma-E protein RseA, C-terminal domain M892_RS13360 PF03872 Anti sigma-E protein RseA, N-terminal domain M892_RS13365 PF17188 MucB/RseB C-terminal domain M892_RS13365 PF03888 MucB/RseB N-terminal domain M892_RS13375 PF00679 Elongation factor G C-terminus M892_RS13375 PF00009 Elongation factor Tu GTP binding domain M892_RS13375 PF03144 Elongation factor Tu domain 2 M892_RS13375 PF06421 GTP-binding protein LepA C-terminus M892_RS13380 PF10502 Signal peptidase, peptidase S26 M892_RS13385 PF00035 Double-stranded RNA binding motif M892_RS13385 PF14622 Ribonuclease-III-like M892_RS13390 PF07650 KH domain M892_RS13390 PF01926 50S ribosome-binding GTPase M892_RS13395 PF02565 Recombination protein O C terminal M892_RS13395 PF11967 Recombination protein O N terminal M892_RS13400 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ M892_RS13405 PF01648 4'-phosphopantetheinyl transferase superfamily M892_RS13410 PF01609 Transposase DDE domain M892_RS13410 PF13006 Insertion element 4 transposase N-terminal M892_RS13415 PF00072 Response regulator receiver domain M892_RS13415 PF01627 Hpt domain M892_RS13415 PF00672 HAMP domain M892_RS13415 PF00512 His Kinase A (phospho-acceptor) domain M892_RS13415 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M892_RS13415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS13420 PF01938 TRAM domain M892_RS13420 PF05958 tRNA (Uracil-5-)-methyltransferase M892_RS13425 PF04607 Region found in RelA / SpoT proteins M892_RS13425 PF02824 TGS domain M892_RS13425 PF13291 ACT domain M892_RS13430 PF03819 MazG nucleotide pyrophosphohydrolase domain M892_RS13435 PF06418 CTP synthase N-terminus M892_RS13435 PF00117 Glutamine amidotransferase class-I M892_RS13440 PF03952 Enolase, N-terminal domain M892_RS13440 PF00113 Enolase, C-terminal TIM barrel domain M892_RS13445 PF04977 Septum formation initiator M892_RS13450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase M892_RS13455 PF02542 YgbB family M892_RS13460 PF01142 tRNA pseudouridine synthase D (TruD) M892_RS13465 PF01975 Survival protein SurE M892_RS13475 PF01551 Peptidase family M23 M892_RS13475 PF01476 LysM domain M892_RS13480 PF04542 Sigma-70 region 2 M892_RS13480 PF04539 Sigma-70 region 3 M892_RS13480 PF00140 Sigma-70 factor, region 1.2 M892_RS13480 PF04545 Sigma-70, region 4 M892_RS13485 PF13006 Insertion element 4 transposase N-terminal M892_RS13485 PF01609 Transposase DDE domain M892_RS13490 PF00488 MutS domain V M892_RS13490 PF01624 MutS domain I M892_RS13490 PF05188 MutS domain II M892_RS13490 PF05192 MutS domain III M892_RS13490 PF05190 MutS family domain IV M892_RS13495 PF02464 Competence-damaged protein M892_RS13500 PF00154 recA bacterial DNA recombination protein M892_RS13505 PF02631 RecX family M892_RS13510 PF02272 DHHA1 domain M892_RS13510 PF01411 tRNA synthetases class II (A) M892_RS13510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain M892_RS13515 PF00696 Amino acid kinase family M892_RS13515 PF13840 ACT domain M892_RS13515 PF01842 ACT domain M892_RS13520 PF02599 Global regulator protein family M892_RS13585 PF00196 Bacterial regulatory proteins, luxR family M892_RS13590 PF04277 Oxaloacetate decarboxylase, gamma chain M892_RS13595 PF00682 HMGL-like M892_RS13595 PF02436 Conserved carboxylase domain M892_RS13595 PF00364 Biotin-requiring enzyme M892_RS13600 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit M892_RS13605 PF00107 Zinc-binding dehydrogenase M892_RS13605 PF08240 Alcohol dehydrogenase GroES-like domain M892_RS13610 PF09335 SNARE associated Golgi protein M892_RS13615 PF00675 Insulinase (Peptidase family M16) M892_RS13615 PF05193 Peptidase M16 inactive domain M892_RS13620 PF04262 Glutamate-cysteine ligase M892_RS13630 PF02664 S-Ribosylhomocysteinase (LuxS) M892_RS13635 PF03471 Transporter associated domain M892_RS13635 PF00571 CBS domain M892_RS13635 PF01595 Cyclin M transmembrane N-terminal domain M892_RS13640 PF01578 Cytochrome C assembly protein M892_RS13645 PF00448 SRP54-type protein, GTPase domain M892_RS13645 PF02881 SRP54-type protein, helical bundle domain M892_RS13645 PF02978 Signal peptide binding domain M892_RS13650 PF00886 Ribosomal protein S16 M892_RS13655 PF01782 RimM N-terminal domain M892_RS13655 PF05239 PRC-barrel domain M892_RS13660 PF01746 tRNA (Guanine-1)-methyltransferase M892_RS13665 PF01245 Ribosomal protein L19 M892_RS13675 PF01548 Transposase M892_RS13675 PF02371 Transposase IS116/IS110/IS902 family M892_RS13680 PF03884 DNA gyrase inhibitor YacG M892_RS13685 PF07072 Cell division protein M892_RS13690 PF01121 Dephospho-CoA kinase M892_RS13695 PF06750 Bacterial Peptidase A24 N-terminal domain M892_RS13695 PF01478 Type IV leader peptidase family M892_RS13700 PF00482 Type II secretion system (T2SS), protein F M892_RS13710 PF00114 Pilin (bacterial filament) M892_RS13710 PF07963 Prokaryotic N-terminal methylation motif M892_RS13720 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain M892_RS13720 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain M892_RS13725 PF01510 N-acetylmuramoyl-L-alanine amidase M892_RS13730 PF00392 Bacterial regulatory proteins, gntR family M892_RS13730 PF07729 FCD domain M892_RS13735 PF00456 Transketolase, thiamine diphosphate binding domain M892_RS13735 PF17831 Pyruvate dehydrogenase E1 component middle domain M892_RS13740 PF00364 Biotin-requiring enzyme M892_RS13740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) M892_RS13740 PF02817 e3 binding domain M892_RS13745 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS13745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M892_RS13755 PF00440 Bacterial regulatory proteins, tetR family M892_RS13760 PF00156 Phosphoribosyl transferase domain M892_RS13765 PF00484 Carbonic anhydrase M892_RS13770 PF00916 Sulfate permease family M892_RS13770 PF01740 STAS domain M892_RS13775 PF00005 ABC transporter M892_RS13780 PF01061 ABC-2 type transporter M892_RS13790 PF03279 Bacterial lipid A biosynthesis acyltransferase M892_RS13795 PF02569 Pantoate-beta-alanine ligase M892_RS13800 PF02548 Ketopantoate hydroxymethyltransferase M892_RS13805 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) M892_RS13810 PF12626 Polymerase A arginine-rich C-terminus M892_RS13810 PF01743 Poly A polymerase head domain M892_RS13810 PF12627 Probable RNA and SrmB- binding site of polymerase A M892_RS13815 PF00749 tRNA synthetases class I (E and Q), catalytic domain M892_RS13820 PF01258 Prokaryotic dksA/traR C4-type zinc finger M892_RS13825 PF17746 SfsA N-terminal OB domain M892_RS13825 PF03749 Sugar fermentation stimulation protein RE domain M892_RS13830 PF04408 Helicase associated domain (HA2) M892_RS13830 PF00271 Helicase conserved C-terminal domain M892_RS13830 PF08482 ATP-dependent helicase C-terminal M892_RS13830 PF00270 DEAD/DEAH box helicase M892_RS13835 PF14814 Bifunctional transglycosylase second domain M892_RS13835 PF00912 Transglycosylase M892_RS13835 PF00905 Penicillin binding protein transpeptidase domain M892_RS13840 PF01734 Patatin-like phospholipase M892_RS13845 PF11791 Aconitate B N-terminal domain M892_RS13845 PF00330 Aconitase family (aconitate hydratase) M892_RS13845 PF06434 Aconitate hydratase 2 N-terminus M892_RS13850 PF01548 Transposase M892_RS13850 PF02371 Transposase IS116/IS110/IS902 family M892_RS13855 PF06062 Uncharacterised protein family (UPF0231) M892_RS13860 PF00543 Nitrogen regulatory protein P-II M892_RS13865 PF00909 Ammonium Transporter Family M892_RS13870 PF13416 Bacterial extracellular solute-binding protein M892_RS13880 PF00005 ABC transporter M892_RS13880 PF08402 TOBE domain M892_RS13885 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M892_RS13885 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M892_RS13885 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M892_RS13885 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M892_RS13890 PF06165 Glycosyltransferase family 36 M892_RS13890 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain M892_RS13895 PF02838 Glycosyl hydrolase family 20, domain 2 M892_RS13895 PF00728 Glycosyl hydrolase family 20, catalytic domain M892_RS13900 PF01869 BadF/BadG/BcrA/BcrD ATPase family M892_RS13910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M892_RS13910 PF00005 ABC transporter M892_RS13915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M892_RS13915 PF00005 ABC transporter M892_RS13920 PF12911 N-terminal TM domain of oligopeptide transport permease C M892_RS13920 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS13925 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS13930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M892_RS13935 PF00497 Bacterial extracellular solute-binding proteins, family 3 M892_RS13935 PF00072 Response regulator receiver domain M892_RS13935 PF00512 His Kinase A (phospho-acceptor) domain M892_RS13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS13940 PF08468 Methyltransferase small domain N-terminal M892_RS13940 PF05175 Methyltransferase small domain M892_RS13945 PF01594 AI-2E family transporter M892_RS13950 PF00202 Aminotransferase class-III M892_RS13955 PF01521 Iron-sulphur cluster biosynthesis M892_RS13960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M892_RS13965 PF00873 AcrB/AcrD/AcrF family M892_RS13970 PF01476 LysM domain M892_RS13970 PF08525 Opacity-associated protein A N-terminal motif M892_RS13970 PF01551 Peptidase family M23 M892_RS13975 PF00579 tRNA synthetases class I (W and Y) M892_RS13990 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family M892_RS13995 PF13609 Gram-negative porin M892_RS14000 PF03449 Transcription elongation factor, N-terminal M892_RS14000 PF01272 Transcription elongation factor, GreA/GreB, C-term M892_RS14005 PF01985 CRS1 / YhbY (CRM) domain M892_RS14010 PF01728 FtsJ-like methyltransferase M892_RS14015 PF01434 Peptidase family M41 M892_RS14015 PF06480 FtsH Extracellular M892_RS14015 PF00004 ATPase family associated with various cellular activities (AAA) M892_RS14015 PF17862 AAA+ lid domain M892_RS14020 PF00809 Pterin binding enzyme M892_RS14025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I M892_RS14025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II M892_RS14025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III M892_RS14025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain M892_RS14035 PF03840 Preprotein translocase SecG subunit M892_RS14050 PF02576 RimP N-terminal domain M892_RS14050 PF17384 RimP C-terminal SH3 domain M892_RS14055 PF13184 NusA-like KH domain M892_RS14055 PF08529 NusA N-terminal domain M892_RS14055 PF00575 S1 RNA binding domain M892_RS14060 PF08364 Bacterial translation initiation factor IF-2 associated region M892_RS14060 PF11987 Translation-initiation factor 2 M892_RS14060 PF04760 Translation initiation factor IF-2, N-terminal region M892_RS14060 PF00009 Elongation factor Tu GTP binding domain M892_RS14065 PF02033 Ribosome-binding factor A M892_RS14070 PF09157 Pseudouridine synthase II TruB, C-terminal M892_RS14070 PF16198 tRNA pseudouridylate synthase B C-terminal domain M892_RS14070 PF01509 TruB family pseudouridylate synthase (N terminal domain) M892_RS14075 PF00312 Ribosomal protein S15 M892_RS14080 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain M892_RS14080 PF03725 3' exoribonuclease family, domain 2 M892_RS14080 PF00013 KH domain M892_RS14080 PF00575 S1 RNA binding domain M892_RS14080 PF01138 3' exoribonuclease family, domain 1 M892_RS14085 PF13181 Tetratricopeptide repeat M892_RS14085 PF07719 Tetratricopeptide repeat M892_RS14095 PF01554 MatE M892_RS14100 PF01136 Peptidase family U32 M892_RS14105 PF01136 Peptidase family U32 M892_RS14110 PF00990 Diguanylate cyclase, GGDEF domain M892_RS14110 PF03707 Bacterial signalling protein N terminal repeat M892_RS14110 PF00563 EAL domain M892_RS14115 PF02036 SCP-2 sterol transfer family M892_RS14120 PF13508 Acetyltransferase (GNAT) domain M892_RS14140 PF00009 Elongation factor Tu GTP binding domain M892_RS14140 PF03144 Elongation factor Tu domain 2 M892_RS14140 PF16658 Class II release factor RF3, C-terminal domain M892_RS14145 PF01026 TatD related DNase M892_RS14150 PF01773 Na+ dependent nucleoside transporter N-terminus M892_RS14150 PF07662 Na+ dependent nucleoside transporter C-terminus M892_RS14150 PF07670 Nucleoside recognition M892_RS14155 PF01791 DeoC/LacD family aldolase M892_RS14160 PF00591 Glycosyl transferase family, a/b domain M892_RS14160 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain M892_RS14160 PF02885 Glycosyl transferase family, helical bundle domain M892_RS14165 PF01676 Metalloenzyme superfamily M892_RS14170 PF01048 Phosphorylase superfamily M892_RS14180 PF18429 Domain of unknown function (DUF5609) M892_RS14190 PF18073 Rubredoxin metal binding domain M892_RS14195 PF03144 Elongation factor Tu domain 2 M892_RS14195 PF00679 Elongation factor G C-terminus M892_RS14195 PF00009 Elongation factor Tu GTP binding domain M892_RS14195 PF03764 Elongation factor G, domain IV M892_RS14195 PF14492 Elongation Factor G, domain II M892_RS14225 PF00501 AMP-binding enzyme M892_RS14230 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain M892_RS14230 PF01464 Transglycosylase SLT domain M892_RS14235 PF03466 LysR substrate binding domain M892_RS14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS14250 PF13007 Transposase C of IS166 homeodomain M892_RS14250 PF03050 Transposase IS66 family M892_RS14250 PF13817 IS66 C-terminal element M892_RS14250 PF13005 zinc-finger binding domain of transposase IS66 M892_RS14270 PF13629 Pilus formation protein N terminal region M892_RS14270 PF00263 Bacterial type II and III secretion system protein M892_RS14270 PF04972 BON domain M892_RS14320 PF00691 OmpA family M892_RS14320 PF05736 OprF membrane domain M892_RS14330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS14330 PF03466 LysR substrate binding domain M892_RS14335 PF13520 Amino acid permease M892_RS14340 PF04074 YhcH/YjgK/YiaL M892_RS14350 PF00356 Bacterial regulatory proteins, lacI family M892_RS14355 PF03717 Penicillin-binding Protein dimerisation domain M892_RS14355 PF00905 Penicillin binding protein transpeptidase domain M892_RS14365 PF16363 GDP-mannose 4,6 dehydratase M892_RS14370 PF02371 Transposase IS116/IS110/IS902 family M892_RS14370 PF01548 Transposase M892_RS14375 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain M892_RS14375 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain M892_RS14385 PF00288 GHMP kinases N terminal domain M892_RS14385 PF10509 Galactokinase galactose-binding signature M892_RS14385 PF08544 GHMP kinases C terminal M892_RS14390 PF01263 Aldose 1-epimerase M892_RS14395 PF00356 Bacterial regulatory proteins, lacI family M892_RS14400 PF00367 phosphotransferase system, EIIB M892_RS14400 PF02378 Phosphotransferase system, EIIC M892_RS14415 PF01588 Putative tRNA binding domain M892_RS14440 PF01266 FAD dependent oxidoreductase M892_RS14440 PF16901 C-terminal domain of alpha-glycerophosphate oxidase M892_RS14445 PF00455 DeoR C terminal sensor domain M892_RS14445 PF08220 DeoR-like helix-turn-helix domain M892_RS14450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain M892_RS14450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain M892_RS14455 PF00230 Major intrinsic protein M892_RS14460 PF07690 Major Facilitator Superfamily M892_RS14465 PF03009 Glycerophosphoryl diester phosphodiesterase family M892_RS14470 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle M892_RS14470 PF14602 Hexapeptide repeat of succinyl-transferase M892_RS14490 PF07130 YebG protein M892_RS14495 PF03466 LysR substrate binding domain M892_RS14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS14505 PF00884 Sulfatase M892_RS14505 PF11893 Domain of unknown function (DUF3413) M892_RS14510 PF17946 RecC C-terminal domain M892_RS14515 PF00580 UvrD/REP helicase N-terminal domain M892_RS14515 PF13361 UvrD-like helicase C-terminal domain M892_RS14515 PF12705 PD-(D/E)XK nuclease superfamily M892_RS14520 PF13538 UvrD-like helicase C-terminal domain M892_RS14535 PF01609 Transposase DDE domain M892_RS14535 PF13006 Insertion element 4 transposase N-terminal M892_RS14545 PF00583 Acetyltransferase (GNAT) family M892_RS14545 PF00696 Amino acid kinase family M892_RS14555 PF06725 3D domain M892_RS14555 PF03562 MltA specific insert domain M892_RS14560 PF00899 ThiF family M892_RS14565 PF02657 Fe-S metabolism associated domain M892_RS14570 PF00266 Aminotransferase class-V M892_RS14575 PF01965 DJ-1/PfpI family M892_RS14580 PF08546 Ketopantoate reductase PanE/ApbA C terminal M892_RS14580 PF02558 Ketopantoate reductase PanE/ApbA M892_RS14585 PF03502 Nucleoside-specific channel-forming protein, Tsx M892_RS14600 PF04545 Sigma-70, region 4 M892_RS14600 PF04542 Sigma-70 region 2 M892_RS14610 PF07690 Major Facilitator Superfamily M892_RS14615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD M892_RS14625 PF05175 Methyltransferase small domain M892_RS14630 PF01722 BolA-like protein M892_RS14635 PF11973 NQRA C-terminal domain M892_RS14635 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) M892_RS14640 PF03116 NQR2, RnfD, RnfE family M892_RS14645 PF04205 FMN-binding domain M892_RS14650 PF02508 Rnf-Nqr subunit, membrane protein M892_RS14655 PF02508 Rnf-Nqr subunit, membrane protein M892_RS14660 PF00175 Oxidoreductase NAD-binding domain M892_RS14660 PF00970 Oxidoreductase FAD-binding domain M892_RS14660 PF00111 2Fe-2S iron-sulfur cluster binding domain M892_RS14665 PF02424 ApbE family M892_RS14675 PF01609 Transposase DDE domain M892_RS14675 PF14706 Transposase DNA-binding M892_RS14675 PF02281 Transposase Tn5 dimerisation domain M892_RS14685 PF00990 Diguanylate cyclase, GGDEF domain M892_RS14685 PF00072 Response regulator receiver domain M892_RS14690 PF00817 impB/mucB/samB family M892_RS14690 PF11799 impB/mucB/samB family C-terminal domain M892_RS14690 PF11798 IMS family HHH motif M892_RS14695 PF09382 RQC domain M892_RS14695 PF00271 Helicase conserved C-terminal domain M892_RS14695 PF16124 RecQ zinc-binding M892_RS14695 PF00570 HRDC domain M892_RS14695 PF00270 DEAD/DEAH box helicase M892_RS14700 PF03449 Transcription elongation factor, N-terminal M892_RS14700 PF01272 Transcription elongation factor, GreA/GreB, C-term M892_RS14710 PF01609 Transposase DDE domain M892_RS14710 PF13006 Insertion element 4 transposase N-terminal M892_RS14715 PF00704 Glycosyl hydrolases family 18 M892_RS14715 PF00041 Fibronectin type III domain M892_RS14720 PF00209 Sodium:neurotransmitter symporter family M892_RS14730 PF06786 Uncharacterised protein family (UPF0253) M892_RS14740 PF03129 Anticodon binding domain M892_RS14740 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) M892_RS14740 PF04073 Aminoacyl-tRNA editing domain M892_RS14745 PF18389 TrmO C-terminal domain M892_RS14745 PF01980 tRNA-methyltransferase O M892_RS14750 PF01197 Ribosomal protein L31 M892_RS14755 PF03806 AbgT putative transporter family M892_RS14760 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 M892_RS14785 PF04287 tRNA pseudouridine synthase C M892_RS14790 PF00849 RNA pseudouridylate synthase M892_RS14795 PF11944 Protein of unknown function (DUF3461) M892_RS14800 PF01966 HD domain M892_RS14800 PF01842 ACT domain M892_RS14800 PF01909 Nucleotidyltransferase domain M892_RS14800 PF08335 GlnD PII-uridylyltransferase M892_RS14805 PF00557 Metallopeptidase family M24 M892_RS14810 PF00318 Ribosomal protein S2 M892_RS14815 PF00889 Elongation factor TS M892_RS14820 PF00696 Amino acid kinase family M892_RS14825 PF01765 Ribosome recycling factor M892_RS14830 PF01255 Putative undecaprenyl diphosphate synthase M892_RS14840 PF13288 DXP reductoisomerase C-terminal domain M892_RS14840 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase M892_RS14840 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain M892_RS14845 PF02163 Peptidase family M50 M892_RS14845 PF17820 PDZ domain M892_RS14850 PF01103 Surface antigen M892_RS14850 PF07244 Surface antigen variable number repeat M892_RS14855 PF03938 Outer membrane protein (OmpH-like) M892_RS14860 PF00132 Bacterial transferase hexapeptide (six repeats) M892_RS14860 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD M892_RS14865 PF07977 FabA-like domain M892_RS14870 PF00132 Bacterial transferase hexapeptide (six repeats) M892_RS14870 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 M892_RS14875 PF02684 Lipid-A-disaccharide synthetase M892_RS14880 PF01351 Ribonuclease HII M892_RS14885 PF02811 PHP domain M892_RS14885 PF14579 Helix-hairpin-helix motif M892_RS14885 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M892_RS14885 PF07733 Bacterial DNA polymerase III alpha NTPase domain M892_RS14885 PF01336 OB-fold nucleic acid binding domain M892_RS14890 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit M892_RS14895 PF11734 TilS substrate C-terminal domain M892_RS14895 PF09179 TilS substrate binding domain M892_RS14895 PF01171 PP-loop family M892_RS14900 PF00034 Cytochrome c M892_RS14905 PF00543 Nitrogen regulatory protein P-II M892_RS14920 PF01476 LysM domain M892_RS14920 PF01464 Transglycosylase SLT domain M892_RS14925 PF16123 Hydroxyacylglutathione hydrolase C-terminus M892_RS14930 PF08241 Methyltransferase domain M892_RS14935 PF00075 RNase H M892_RS14940 PF00929 Exonuclease M892_RS14965 PF09317 Domain of unknown function (DUF1974) M892_RS14965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain M892_RS14965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain M892_RS14965 PF02770 Acyl-CoA dehydrogenase, middle domain M892_RS14970 PF13580 SIS domain M892_RS14975 PF13230 Glutamine amidotransferases class-II M892_RS14980 PF00551 Formyl transferase M892_RS14985 PF02769 AIR synthase related protein, C-terminal domain M892_RS14985 PF00586 AIR synthase related protein, N-terminal domain M892_RS14995 PF00860 Permease family M892_RS15010 PF03358 NADPH-dependent FMN reductase M892_RS15015 PF03960 ArsC family M892_RS15020 PF01435 Peptidase family M48 M892_RS15020 PF13181 Tetratricopeptide repeat M892_RS15030 PF01594 AI-2E family transporter M892_RS15035 PF14706 Transposase DNA-binding M892_RS15035 PF01609 Transposase DDE domain M892_RS15035 PF02281 Transposase Tn5 dimerisation domain M892_RS15040 PF00578 AhpC/TSA family M892_RS15045 PF01842 ACT domain M892_RS15050 PF00701 Dihydrodipicolinate synthetase family M892_RS15055 PF06804 NlpB/DapX lipoprotein M892_RS15070 PF07687 Peptidase dimerisation domain M892_RS15070 PF01546 Peptidase family M20/M25/M40 M892_RS15075 PF03960 ArsC family M892_RS15095 PF11143 Protein of unknown function (DUF2919) M892_RS15100 PF04261 Dyp-type peroxidase family M892_RS15105 PF14706 Transposase DNA-binding M892_RS15105 PF02281 Transposase Tn5 dimerisation domain M892_RS15105 PF01609 Transposase DDE domain M892_RS15110 PF00700 Bacterial flagellin C-terminal helical region M892_RS15110 PF00669 Bacterial flagellin N-terminal helical region M892_RS15110 PF07196 Flagellin hook IN motif M892_RS15115 PF07196 Flagellin hook IN motif M892_RS15115 PF00669 Bacterial flagellin N-terminal helical region M892_RS15115 PF00700 Bacterial flagellin C-terminal helical region M892_RS15125 PF00669 Bacterial flagellin N-terminal helical region M892_RS15125 PF00700 Bacterial flagellin C-terminal helical region M892_RS15125 PF07196 Flagellin hook IN motif M892_RS15130 PF03646 FlaG protein M892_RS15135 PF07195 Flagellar hook-associated protein 2 C-terminus M892_RS15135 PF07196 Flagellin hook IN motif M892_RS15135 PF02465 Flagellar hook-associated protein 2 N-terminus M892_RS15145 PF02561 Flagellar protein FliS M892_RS15150 PF00158 Sigma-54 interaction domain M892_RS15150 PF06490 Flagellar regulatory protein FleQ M892_RS15150 PF02954 Bacterial regulatory protein, Fis family M892_RS15155 PF00512 His Kinase A (phospho-acceptor) domain M892_RS15155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS15155 PF13188 PAS domain M892_RS15160 PF02954 Bacterial regulatory protein, Fis family M892_RS15160 PF00072 Response regulator receiver domain M892_RS15160 PF00158 Sigma-54 interaction domain M892_RS15165 PF02049 Flagellar hook-basal body complex protein FliE M892_RS15170 PF08345 Flagellar M-ring protein C-terminal M892_RS15170 PF01514 Secretory protein of YscJ/FliF family M892_RS15175 PF14841 FliG middle domain M892_RS15175 PF01706 FliG C-terminal domain M892_RS15175 PF14842 FliG N-terminal domain M892_RS15185 PF18269 T3SS EscN ATPase C-terminal domain M892_RS15185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain M892_RS15210 PF02154 Flagellar motor switch protein FliM M892_RS15210 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M892_RS15215 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term M892_RS15220 PF04347 Flagellar biosynthesis protein, FliO M892_RS15225 PF00813 FliP family M892_RS15230 PF01313 Bacterial export proteins, family 3 M892_RS15235 PF01311 Bacterial export proteins, family 1 M892_RS15240 PF01312 FlhB HrpN YscU SpaS Family M892_RS15245 PF00771 FHIPEP family M892_RS15250 PF00448 SRP54-type protein, GTPase domain M892_RS15255 PF10609 NUBPL iron-transfer P-loop NTPase M892_RS15260 PF04545 Sigma-70, region 4 M892_RS15260 PF04539 Sigma-70 region 3 M892_RS15260 PF04542 Sigma-70 region 2 M892_RS15265 PF00072 Response regulator receiver domain M892_RS15270 PF04344 Chemotaxis phosphatase, CheZ M892_RS15275 PF01584 CheW-like domain M892_RS15275 PF01627 Hpt domain M892_RS15275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS15275 PF00072 Response regulator receiver domain M892_RS15275 PF02895 Signal transducing histidine kinase, homodimeric domain M892_RS15280 PF00072 Response regulator receiver domain M892_RS15280 PF01339 CheB methylesterase M892_RS15285 PF13614 AAA domain M892_RS15295 PF01584 CheW-like domain M892_RS15305 PF00005 ABC transporter M892_RS15310 PF03379 CcmB protein M892_RS15315 PF01578 Cytochrome C assembly protein M892_RS15325 PF03100 CcmE M892_RS15330 PF01578 Cytochrome C assembly protein M892_RS15330 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M892_RS15335 PF08534 Redoxin M892_RS15340 PF03918 Cytochrome C biogenesis protein M892_RS15345 PF03918 Cytochrome C biogenesis protein M892_RS15350 PF04333 MlaA lipoprotein M892_RS15355 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M892_RS15360 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) M892_RS15370 PF08281 Sigma-70, region 4 M892_RS15370 PF04542 Sigma-70 region 2 M892_RS15375 PF00108 Thiolase, N-terminal domain M892_RS15375 PF02803 Thiolase, C-terminal domain M892_RS15385 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS15390 PF00675 Insulinase (Peptidase family M16) M892_RS15390 PF05193 Peptidase M16 inactive domain M892_RS15390 PF16187 Middle or third domain of peptidase_M16 M892_RS15395 PF00300 Histidine phosphatase superfamily (branch 1) M892_RS15400 PF01713 Smr domain M892_RS15405 PF05175 Methyltransferase small domain M892_RS15410 PF01264 Chorismate synthase M892_RS15415 PF01609 Transposase DDE domain M892_RS15415 PF02281 Transposase Tn5 dimerisation domain M892_RS15415 PF14706 Transposase DNA-binding M892_RS15420 PF03458 UPF0126 domain M892_RS15425 PF04315 Elongation factor P hydroxylase M892_RS15430 PF08891 YfcL protein M892_RS15445 PF05430 S-adenosyl-L-methionine-dependent methyltransferase M892_RS15445 PF01266 FAD dependent oxidoreductase M892_RS15450 PF00109 Beta-ketoacyl synthase, N-terminal domain M892_RS15450 PF02801 Beta-ketoacyl synthase, C-terminal domain M892_RS15455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain M892_RS15455 PF11890 Domain of unknown function (DUF3410) M892_RS15455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain M892_RS15460 PF02774 Semialdehyde dehydrogenase, dimerisation domain M892_RS15460 PF01118 Semialdehyde dehydrogenase, NAD binding domain M892_RS15470 PF01416 tRNA pseudouridine synthase M892_RS15480 PF17848 Acetyl-coA carboxylase zinc finger domain M892_RS15480 PF01039 Carboxyl transferase domain M892_RS15485 PF08245 Mur ligase middle domain M892_RS15485 PF02875 Mur ligase family, glutamate ligase domain M892_RS15490 PF05036 Sporulation related domain M892_RS15495 PF02674 Colicin V production protein M892_RS15500 PF00156 Phosphoribosyl transferase domain M892_RS15510 PF03466 LysR substrate binding domain M892_RS15510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS15515 PF00072 Response regulator receiver domain M892_RS15525 PF04304 Protein of unknown function (DUF454) M892_RS15530 PF00156 Phosphoribosyl transferase domain M892_RS15535 PF12169 DNA polymerase III subunits gamma and tau domain III M892_RS15535 PF12170 DNA polymerase III tau subunit V interacting with alpha M892_RS15540 PF02575 YbaB/EbfC DNA-binding family M892_RS15545 PF13662 Toprim domain M892_RS15545 PF02132 RecR protein M892_RS15550 PF00230 Major intrinsic protein M892_RS15560 PF01042 Endoribonuclease L-PSP M892_RS15565 PF03313 Serine dehydratase alpha chain M892_RS15570 PF13309 HTH domain M892_RS15570 PF08348 YheO-like PAS domain M892_RS15575 PF03692 Putative zinc- or iron-chelating domain M892_RS15580 PF03692 Putative zinc- or iron-chelating domain M892_RS15625 PF04226 Transglycosylase associated protein M892_RS15630 PF06826 Predicted Permease Membrane Region M892_RS15635 PF00282 Pyridoxal-dependent decarboxylase conserved domain M892_RS15640 PF00924 Mechanosensitive ion channel M892_RS15640 PF05552 Conserved TM helix M892_RS15650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M892_RS15660 PF13276 HTH-like domain M892_RS15660 PF00665 Integrase core domain M892_RS15660 PF13333 Integrase core domain M892_RS15665 PF00245 Alkaline phosphatase M892_RS15670 PF02028 BCCT, betaine/carnitine/choline family transporter M892_RS15685 PF13847 Methyltransferase domain M892_RS15690 PF01156 Inosine-uridine preferring nucleoside hydrolase M892_RS15700 PF01263 Aldose 1-epimerase M892_RS15705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain M892_RS15705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain M892_RS15710 PF01641 SelR domain M892_RS15720 PF07023 Protein of unknown function (DUF1315) M892_RS15725 PF17763 Glutaminase/Asparaginase C-terminal domain M892_RS15725 PF00710 Asparaginase, N-terminal M892_RS15730 PF01343 Peptidase family S49 M892_RS15735 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS15735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family M892_RS15740 PF00881 Nitroreductase family M892_RS15745 PF01131 DNA topoisomerase M892_RS15745 PF01751 Toprim domain M892_RS15760 PF00106 short chain dehydrogenase M892_RS15765 PF00850 Histone deacetylase domain M892_RS15775 PF05987 Bacterial protein of unknown function (DUF898) M892_RS15785 PF01609 Transposase DDE domain M892_RS15785 PF13006 Insertion element 4 transposase N-terminal M892_RS15800 PF00884 Sulfatase M892_RS15800 PF11893 Domain of unknown function (DUF3413) M892_RS15805 PF07208 Protein of unknown function (DUF1414) M892_RS15810 PF04245 37-kD nucleoid-associated bacterial protein M892_RS15815 PF13006 Insertion element 4 transposase N-terminal M892_RS15815 PF01609 Transposase DDE domain M892_RS15830 PF03553 Na+/H+ antiporter family M892_RS15835 PF01118 Semialdehyde dehydrogenase, NAD binding domain M892_RS15835 PF02774 Semialdehyde dehydrogenase, dimerisation domain M892_RS15840 PF00027 Cyclic nucleotide-binding domain M892_RS15840 PF00520 Ion transport protein M892_RS15845 PF01914 MarC family integral membrane protein M892_RS15850 PF00465 Iron-containing alcohol dehydrogenase M892_RS15850 PF00171 Aldehyde dehydrogenase family M892_RS15855 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS15870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain M892_RS15870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain M892_RS15875 PF00462 Glutaredoxin M892_RS15880 PF13737 Transposase DDE domain M892_RS15885 PF04542 Sigma-70 region 2 M892_RS15885 PF00140 Sigma-70 factor, region 1.2 M892_RS15885 PF04545 Sigma-70, region 4 M892_RS15885 PF04539 Sigma-70 region 3 M892_RS15905 PF00990 Diguanylate cyclase, GGDEF domain M892_RS15905 PF00072 Response regulator receiver domain M892_RS15920 PF13817 IS66 C-terminal element M892_RS15920 PF13005 zinc-finger binding domain of transposase IS66 M892_RS15920 PF03050 Transposase IS66 family M892_RS15920 PF13007 Transposase C of IS166 homeodomain M892_RS15925 PF13737 Transposase DDE domain M892_RS15930 PF03135 CagE, TrbE, VirB family, component of type IV transporter system M892_RS15965 PF13726 Na+-H+ antiporter family M892_RS15965 PF03553 Na+/H+ antiporter family M892_RS15970 PF00929 Exonuclease M892_RS15975 PF18393 MotY N-terminal domain M892_RS15975 PF00691 OmpA family M892_RS15980 PF10952 Protein of unknown function (DUF2753) M892_RS15985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily M892_RS15990 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS15995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS16015 PF03050 Transposase IS66 family M892_RS16015 PF13817 IS66 C-terminal element M892_RS16015 PF13007 Transposase C of IS166 homeodomain M892_RS16015 PF13005 zinc-finger binding domain of transposase IS66 M892_RS16050 PF00633 Helix-hairpin-helix motif M892_RS16050 PF10576 Iron-sulfur binding domain of endonuclease III M892_RS16050 PF00730 HhH-GPD superfamily base excision DNA repair protein M892_RS16055 PF02508 Rnf-Nqr subunit, membrane protein M892_RS16060 PF04205 FMN-binding domain M892_RS16065 PF03116 NQR2, RnfD, RnfE family M892_RS16070 PF12838 4Fe-4S dicluster domain M892_RS16070 PF13375 RnfC Barrel sandwich hybrid domain M892_RS16070 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit M892_RS16070 PF10531 SLBB domain M892_RS16075 PF04060 Putative Fe-S cluster M892_RS16080 PF02508 Rnf-Nqr subunit, membrane protein M892_RS16085 PF02901 Pyruvate formate lyase-like M892_RS16085 PF01228 Glycine radical M892_RS16095 PF17757 UvrB interaction domain M892_RS16095 PF02151 UvrB/uvrC motif M892_RS16095 PF04851 Type III restriction enzyme, res subunit M892_RS16095 PF00271 Helicase conserved C-terminal domain M892_RS16095 PF12344 Ultra-violet resistance protein B M892_RS16105 PF00158 Sigma-54 interaction domain M892_RS16105 PF00072 Response regulator receiver domain M892_RS16105 PF02954 Bacterial regulatory protein, Fis family M892_RS16110 PF01627 Hpt domain M892_RS16120 PF13817 IS66 C-terminal element M892_RS16120 PF03050 Transposase IS66 family M892_RS16120 PF13007 Transposase C of IS166 homeodomain M892_RS16120 PF13005 zinc-finger binding domain of transposase IS66 M892_RS16125 PF01933 Uncharacterised protein family UPF0052 M892_RS16130 PF04055 Radical SAM superfamily M892_RS16130 PF06463 Molybdenum Cofactor Synthesis C M892_RS16135 PF00994 Probable molybdopterin binding domain M892_RS16140 PF01967 MoaC family M892_RS16145 PF02597 ThiS family M892_RS16150 PF02391 MoaE protein M892_RS16155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M892_RS16160 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS16165 PF00528 Binding-protein-dependent transport system inner membrane component M892_RS16165 PF12911 N-terminal TM domain of oligopeptide transport permease C M892_RS16170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M892_RS16170 PF00005 ABC transporter M892_RS16175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region M892_RS16175 PF00005 ABC transporter M892_RS16180 PF13409 Glutathione S-transferase, N-terminal domain M892_RS16185 PF01515 Phosphate acetyl/butaryl transferase M892_RS16185 PF07085 DRTGG domain M892_RS16190 PF00871 Acetokinase family M892_RS16195 PF04217 Protein of unknown function, DUF412 M892_RS16205 PF02653 Branched-chain amino acid transport system / permease component M892_RS16210 PF00005 ABC transporter M892_RS16220 PF00990 Diguanylate cyclase, GGDEF domain M892_RS16220 PF00072 Response regulator receiver domain M892_RS16225 PF01207 Dihydrouridine synthase (Dus) M892_RS16230 PF01043 SecA preprotein cross-linking domain M892_RS16230 PF07516 SecA Wing and Scaffold domain M892_RS16230 PF02810 SEC-C motif M892_RS16230 PF07517 SecA DEAD-like domain M892_RS16235 PF02600 Disulfide bond formation protein DsbB M892_RS16240 PF06450 Bacterial Na+/H+ antiporter B (NhaB) M892_RS16245 PF00392 Bacterial regulatory proteins, gntR family M892_RS16245 PF07840 FadR C-terminal domain M892_RS16255 PF09334 tRNA synthetases class I (M) M892_RS16255 PF01588 Putative tRNA binding domain M892_RS16260 PF10609 NUBPL iron-transfer P-loop NTPase M892_RS16265 PF00485 Phosphoribulokinase / Uridine kinase family M892_RS16275 PF12557 Cob(I)alamin adenosyltransferase N terminal M892_RS16275 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP M892_RS16280 PF01451 Low molecular weight phosphotyrosine protein phosphatase M892_RS16285 PF01740 STAS domain M892_RS16285 PF00916 Sulfate permease family M892_RS16290 PF01609 Transposase DDE domain M892_RS16290 PF02281 Transposase Tn5 dimerisation domain M892_RS16290 PF14706 Transposase DNA-binding M892_RS16295 PF10150 Ribonuclease E/G family M892_RS16295 PF12111 Polyribonucleotide phosphorylase C terminal M892_RS16295 PF00575 S1 RNA binding domain M892_RS16300 PF00849 RNA pseudouridylate synthase M892_RS16300 PF01479 S4 domain M892_RS16310 PF02545 Maf-like protein M892_RS16315 PF02620 Large ribosomal RNA subunit accumulation protein YceD M892_RS16320 PF01783 Ribosomal L32p protein family M892_RS16325 PF02504 Fatty acid synthesis protein M892_RS16330 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III M892_RS16330 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal M892_RS16335 PF00698 Acyl transferase domain M892_RS16345 PF00550 Phosphopantetheine attachment site M892_RS16350 PF02801 Beta-ketoacyl synthase, C-terminal domain M892_RS16350 PF00109 Beta-ketoacyl synthase, N-terminal domain M892_RS16355 PF01063 Amino-transferase class IV M892_RS16360 PF02618 YceG-like family M892_RS16365 PF02223 Thymidylate kinase M892_RS16370 PF09115 DNA polymerase III, delta subunit, C terminal M892_RS16375 PF01026 TatD related DNase M892_RS16380 PF02378 Phosphotransferase system, EIIC M892_RS16380 PF00367 phosphotransferase system, EIIB M892_RS16390 PF01609 Transposase DDE domain M892_RS16390 PF13006 Insertion element 4 transposase N-terminal M892_RS16395 PF00209 Sodium:neurotransmitter symporter family M892_RS16415 PF01734 Patatin-like phospholipase M892_RS16445 PF00665 Integrase core domain M892_RS16445 PF13333 Integrase core domain M892_RS16445 PF13276 HTH-like domain M892_RS16450 PF02369 Bacterial Ig-like domain (group 1) M892_RS16450 PF11924 Inverse autotransporter, beta-domain M892_RS16450 PF07979 Intimin C-type lectin domain M892_RS16450 PF09134 Invasin, domain 3 M892_RS16480 PF00135 Carboxylesterase family M892_RS16490 PF13737 Transposase DDE domain M892_RS16505 PF00224 Pyruvate kinase, barrel domain M892_RS16505 PF02887 Pyruvate kinase, alpha/beta domain M892_RS16510 PF03050 Transposase IS66 family M892_RS16510 PF13817 IS66 C-terminal element M892_RS16510 PF13007 Transposase C of IS166 homeodomain M892_RS16510 PF13005 zinc-finger binding domain of transposase IS66 M892_RS16525 PF00480 ROK family M892_RS16530 PF00072 Response regulator receiver domain M892_RS16530 PF01584 CheW-like domain M892_RS16535 PF07733 Bacterial DNA polymerase III alpha NTPase domain M892_RS16535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M892_RS16535 PF02811 PHP domain M892_RS16535 PF01336 OB-fold nucleic acid binding domain M892_RS16535 PF14579 Helix-hairpin-helix motif M892_RS16550 PF00106 short chain dehydrogenase M892_RS16555 PF08496 Peptidase family S49 N-terminal M892_RS16555 PF01343 Peptidase family S49 M892_RS16560 PF02224 Cytidylate kinase M892_RS16565 PF00575 S1 RNA binding domain M892_RS16570 PF00216 Bacterial DNA-binding protein M892_RS16575 PF06305 Lipopolysaccharide assembly protein A domain M892_RS16580 PF18073 Rubredoxin metal binding domain M892_RS16585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family M892_RS16590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle M892_RS16605 PF03886 ABC-type transport auxiliary lipoprotein component M892_RS16610 PF02470 MlaD protein M892_RS16615 PF04403 Paraquat-inducible protein A M892_RS16620 PF03466 LysR substrate binding domain M892_RS16620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS16630 PF11412 Disulphide bond corrector protein DsbC M892_RS16630 PF02683 Cytochrome C biogenesis protein transmembrane region M892_RS16645 PF01938 TRAM domain M892_RS16645 PF05958 tRNA (Uracil-5-)-methyltransferase M892_RS16670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion M892_RS16680 PF00005 ABC transporter M892_RS16680 PF02687 FtsX-like permease family M892_RS16680 PF12704 MacB-like periplasmic core domain M892_RS16685 PF00005 ABC transporter M892_RS16685 PF02687 FtsX-like permease family M892_RS16685 PF12704 MacB-like periplasmic core domain M892_RS16690 PF12704 MacB-like periplasmic core domain M892_RS16690 PF00005 ABC transporter M892_RS16690 PF02687 FtsX-like permease family M892_RS16705 PF00929 Exonuclease M892_RS16705 PF02811 PHP domain M892_RS16705 PF14579 Helix-hairpin-helix motif M892_RS16705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain M892_RS16705 PF07733 Bacterial DNA polymerase III alpha NTPase domain M892_RS16705 PF11490 DNA polymerase III polC-type N-terminus II M892_RS16715 PF02631 RecX family M892_RS16725 PF02954 Bacterial regulatory protein, Fis family M892_RS16770 PF00665 Integrase core domain M892_RS16770 PF13333 Integrase core domain M892_RS16770 PF13276 HTH-like domain M892_RS16775 PF02371 Transposase IS116/IS110/IS902 family M892_RS16775 PF01548 Transposase M892_RS16785 PF00106 short chain dehydrogenase M892_RS16815 PF01717 Cobalamin-independent synthase, Catalytic domain M892_RS16815 PF08267 Cobalamin-independent synthase, N-terminal domain M892_RS16820 PF02371 Transposase IS116/IS110/IS902 family M892_RS16820 PF01548 Transposase M892_RS16850 PF00512 His Kinase A (phospho-acceptor) domain M892_RS16850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS16850 PF00672 HAMP domain M892_RS16855 PF00072 Response regulator receiver domain M892_RS16855 PF00486 Transcriptional regulatory protein, C terminal M892_RS16860 PF00535 Glycosyl transferase family 2 M892_RS16865 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase M892_RS16875 PF00672 HAMP domain M892_RS16875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain M892_RS16880 PF02668 Taurine catabolism dioxygenase TauD, TfdA family M892_RS16885 PF08348 YheO-like PAS domain M892_RS16885 PF13309 HTH domain M892_RS16890 PF01042 Endoribonuclease L-PSP M892_RS16895 PF00375 Sodium:dicarboxylate symporter family M892_RS16900 PF07992 Pyridine nucleotide-disulphide oxidoreductase M892_RS16900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain M892_RS16920 PF11842 Domain of unknown function (DUF3362) M892_RS16920 PF04055 Radical SAM superfamily M892_RS16920 PF08497 Radical SAM N-terminal M892_RS16925 PF00990 Diguanylate cyclase, GGDEF domain M892_RS16925 PF00563 EAL domain M892_RS16925 PF00498 FHA domain M892_RS16940 PF03466 LysR substrate binding domain M892_RS16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family M892_RS16945 PF01717 Cobalamin-independent synthase, Catalytic domain M892_RS16945 PF08267 Cobalamin-independent synthase, N-terminal domain M892_RS16955 PF03795 YCII-related domain M892_RS16960 PF03061 Thioesterase superfamily M892_RS16965 PF04279 Intracellular septation protein A M892_RS16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS16975 PF00072 Response regulator receiver domain M892_RS16980 PF17327 Acyl homoserine lactone synthase M892_RS16985 PF00375 Sodium:dicarboxylate symporter family M892_RS16990 PF00290 Tryptophan synthase alpha chain M892_RS16995 PF00291 Pyridoxal-phosphate dependent enzyme M892_RS17000 PF00218 Indole-3-glycerol phosphate synthase M892_RS17000 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase M892_RS17005 PF00591 Glycosyl transferase family, a/b domain M892_RS17005 PF02885 Glycosyl transferase family, helical bundle domain M892_RS17010 PF00117 Glutamine amidotransferase class-I M892_RS17015 PF00425 chorismate binding enzyme M892_RS17015 PF04715 Anthranilate synthase component I, N terminal region M892_RS17020 PF08056 Tryptophan operon leader peptide M892_RS17025 PF02811 PHP domain M892_RS17030 PF01300 Telomere recombination M892_RS17040 PF00849 RNA pseudouridylate synthase M892_RS17040 PF01479 S4 domain M892_RS17045 PF04269 Protein of unknown function, DUF440 M892_RS17050 PF01132 Elongation factor P (EF-P) OB domain M892_RS17050 PF08207 Elongation factor P (EF-P) KOW-like domain M892_RS17050 PF09285 Elongation factor P, C-terminal M892_RS17060 PF00136 DNA polymerase family B M892_RS17060 PF03104 DNA polymerase family B, exonuclease domain M892_RS17065 PF00196 Bacterial regulatory proteins, luxR family M892_RS17065 PF00072 Response regulator receiver domain M892_RS17075 PF01066 CDP-alcohol phosphatidyltransferase M892_RS17090 PF00202 Aminotransferase class-III M892_RS17095 PF03435 Saccharopine dehydrogenase NADP binding domain M892_RS17095 PF16653 Saccharopine dehydrogenase C-terminal domain M892_RS17100 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain M892_RS17115 PF02464 Competence-damaged protein M892_RS17115 PF00994 Probable molybdopterin binding domain M892_RS17125 PF00268 Ribonucleotide reductase, small chain M892_RS17130 PF02867 Ribonucleotide reductase, barrel domain M892_RS17130 PF00317 Ribonucleotide reductase, all-alpha domain M892_RS17130 PF03477 ATP cone domain M892_RS17140 PF00521 DNA gyrase/topoisomerase IV, subunit A M892_RS17140 PF03989 DNA gyrase C-terminal domain, beta-propeller M892_RS17155 PF02335 Cytochrome c552 M892_RS17170 PF03916 Polysulphide reductase, NrfD M892_RS17175 PF01578 Cytochrome C assembly protein M892_RS17175 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal M892_RS17180 PF08534 Redoxin M892_RS17185 PF03918 Cytochrome C biogenesis protein M892_RS17195 PF00925 GTP cyclohydrolase II M892_RS17220 PF03734 L,D-transpeptidase catalytic domain M892_RS17220 PF01471 Putative peptidoglycan binding domain M892_RS17225 PF05951 Bacterial protein of unknown function (DUF882) M892_RS17230 PF00753 Metallo-beta-lactamase superfamily M892_RS17295 PF00561 alpha/beta hydrolase fold M892_RS17335 PF00209 Sodium:neurotransmitter symporter family M892_RS17505 PF04851 Type III restriction enzyme, res subunit M892_RS17505 PF00271 Helicase conserved C-terminal domain M892_RS17785 PF00005 ABC transporter M892_RS17785 PF00664 ABC transporter transmembrane region M892_RS18065 PF13358 DDE superfamily endonuclease M892_RS18115 PF03741 Integral membrane protein TerC family M892_RS18165 PF00005 ABC transporter M892_RS18165 PF00664 ABC transporter transmembrane region M892_RS18170 PF00005 ABC transporter M892_RS18170 PF00664 ABC transporter transmembrane region M892_RS18495 PF01406 tRNA synthetases class I (C) catalytic domain M892_RS18500 PF01406 tRNA synthetases class I (C) catalytic domain M892_RS18520 PF00571 CBS domain M892_RS18625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS18625 PF00989 PAS fold M892_RS18625 PF17203 Single cache domain 3 M892_RS18625 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain M892_RS18850 PF00694 Aconitase C-terminal domain M892_RS18850 PF00330 Aconitase family (aconitate hydratase) M892_RS19490 PF00005 ABC transporter M892_RS19750 PF00672 HAMP domain M892_RS19750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) M892_RS19750 PF00072 Response regulator receiver domain M892_RS19750 PF01627 Hpt domain M892_RS19750 PF00512 His Kinase A (phospho-acceptor) domain M892_RS19750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS19835 PF00117 Glutamine amidotransferase class-I M892_RS19835 PF03352 Methyladenine glycosylase M892_RS19835 PF00958 GMP synthase C terminal domain M892_RS19835 PF13302 Acetyltransferase (GNAT) domain M892_RS19835 PF13673 Acetyltransferase (GNAT) domain M892_RS19915 PF00041 Fibronectin type III domain M892_RS19915 PF12561 ToxR activated gene A lipoprotein domain M892_RS20190 PF00668 Condensation domain M892_RS20190 PF13193 AMP-binding enzyme C-terminal domain M892_RS20190 PF00501 AMP-binding enzyme M892_RS20240 PF04954 Siderophore-interacting protein M892_RS20240 PF08021 Siderophore-interacting FAD-binding domain M892_RS20240 PF00005 ABC transporter M892_RS20240 PF00664 ABC transporter transmembrane region M892_RS20245 PF00005 ABC transporter M892_RS20350 PF17392 Urocanase C-terminal domain M892_RS20350 PF01175 Urocanase Rossmann-like domain M892_RS20350 PF17391 Urocanase N-terminal domain M892_RS20625 PF03050 Transposase IS66 family M892_RS20625 PF13817 IS66 C-terminal element M892_RS20625 PF13007 Transposase C of IS166 homeodomain M892_RS20625 PF13005 zinc-finger binding domain of transposase IS66 M892_RS20895 PF00425 chorismate binding enzyme M892_RS20895 PF04715 Anthranilate synthase component I, N terminal region M892_RS21145 PF14706 Transposase DNA-binding M892_RS21145 PF02281 Transposase Tn5 dimerisation domain M892_RS21145 PF01609 Transposase DDE domain M892_RS21310 PF08645 Polynucleotide kinase 3 phosphatase M892_RS21310 PF00475 Imidazoleglycerol-phosphate dehydratase M892_RS21345 PF00294 pfkB family carbohydrate kinase M892_RS21370 PF00206 Lyase M892_RS21370 PF08328 Adenylosuccinate lyase C-terminal M892_RS21835 PF01311 Bacterial export proteins, family 1 M892_RS22285 PF04052 TolB amino-terminal domain M892_RS22285 PF07676 WD40-like Beta Propeller Repeat M892_RS22435 PF16330 MukB hinge domain M892_RS22435 PF04310 MukB N-terminal M892_RS22450 PF04288 MukE-like family M892_RS22520 PF01131 DNA topoisomerase M892_RS22520 PF01751 Toprim domain M892_RS22520 PF01396 Topoisomerase DNA binding C4 zinc finger M892_RS22520 PF08272 Topoisomerase I zinc-ribbon-like M892_RS22525 PF01131 DNA topoisomerase M892_RS22525 PF08272 Topoisomerase I zinc-ribbon-like M892_RS22525 PF01751 Toprim domain M892_RS22525 PF01396 Topoisomerase DNA binding C4 zinc finger M892_RS22755 PF00664 ABC transporter transmembrane region M892_RS22755 PF00005 ABC transporter M892_RS22955 PF02374 Anion-transporting ATPase M892_RS23030 PF13005 zinc-finger binding domain of transposase IS66 M892_RS23030 PF13007 Transposase C of IS166 homeodomain M892_RS23030 PF13817 IS66 C-terminal element M892_RS23030 PF03050 Transposase IS66 family M892_RS23135 PF13378 Enolase C-terminal domain-like M892_RS23145 PF16582 Middle domain of thiamine pyrophosphate M892_RS23145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain M892_RS23145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain M892_RS23290 PF00975 Thioesterase domain M892_RS23290 PF00668 Condensation domain M892_RS23290 PF00501 AMP-binding enzyme M892_RS23290 PF00550 Phosphopantetheine attachment site M892_RS23295 PF00501 AMP-binding enzyme M892_RS23295 PF00550 Phosphopantetheine attachment site M892_RS23295 PF00668 Condensation domain M892_RS23295 PF13193 AMP-binding enzyme C-terminal domain M892_RS23295 PF00975 Thioesterase domain M892_RS23370 PF13193 AMP-binding enzyme C-terminal domain M892_RS23370 PF00501 AMP-binding enzyme M892_RS23380 PF12697 Alpha/beta hydrolase family M892_RS23400 PF04851 Type III restriction enzyme, res subunit M892_RS23400 PF13307 Helicase C-terminal domain M892_RS23505 PF16078 2-oxoglutarate dehydrogenase N-terminus M892_RS23505 PF16870 2-oxoglutarate dehydrogenase C-terminal M892_RS23505 PF02779 Transketolase, pyrimidine binding domain M892_RS23505 PF00676 Dehydrogenase E1 component M892_RS23540 PF01548 Transposase M892_RS23540 PF02371 Transposase IS116/IS110/IS902 family M892_RS23590 PF02378 Phosphotransferase system, EIIC M892_RS23590 PF00367 phosphotransferase system, EIIB M892_RS23690 PF01145 SPFH domain / Band 7 family M892_RS23690 PF16200 C-terminal region of band_7 M892_RS23875 PF00749 tRNA synthetases class I (E and Q), catalytic domain M892_RS23965 PF01479 S4 domain M892_RS23965 PF00849 RNA pseudouridylate synthase M892_RS24115 PF00905 Penicillin binding protein transpeptidase domain M892_RS24115 PF03717 Penicillin-binding Protein dimerisation domain M892_RS24165 PF00464 Serine hydroxymethyltransferase M892_RS24185 PF00367 phosphotransferase system, EIIB M892_RS24185 PF02378 Phosphotransferase system, EIIC M892_RS24240 PF14489 QueF-like protein M892_RS24240 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term M892_RS24455 PF02769 AIR synthase related protein, C-terminal domain M892_RS24455 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal M892_RS24455 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain M892_RS24475 PF01464 Transglycosylase SLT domain M892_RS24475 PF00497 Bacterial extracellular solute-binding proteins, family 3 M892_RS24670 PF12008 Type I restriction and modification enzyme - subunit R C terminal M892_RS24670 PF18766 SWI2/SNF2 ATPase M892_RS24670 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) M892_RS24940 PF00883 Cytosol aminopeptidase family, catalytic domain M892_RS24940 PF12404 Peptidase M892_RS25290 PF02896 PEP-utilising enzyme, TIM barrel domain M892_RS25290 PF01590 GAF domain M892_RS25290 PF05524 PEP-utilising enzyme, N-terminal M892_RS25290 PF00391 PEP-utilising enzyme, mobile domain M892_RS25340 PF02899 Phage integrase, N-terminal SAM-like domain M892_RS25340 PF00589 Phage integrase family M892_RS25390 PF01235 Sodium:alanine symporter family M892_RS25510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS25510 PF00072 Response regulator receiver domain M892_RS25510 PF00989 PAS fold M892_RS25510 PF01627 Hpt domain M892_RS25510 PF00512 His Kinase A (phospho-acceptor) domain M892_RS25510 PF18415 Histidine kinase receptor ArcB trans-membrane domain M892_RS25515 PF01627 Hpt domain M892_RS25515 PF18415 Histidine kinase receptor ArcB trans-membrane domain M892_RS25515 PF00512 His Kinase A (phospho-acceptor) domain M892_RS25515 PF00989 PAS fold M892_RS25515 PF00072 Response regulator receiver domain M892_RS25515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase M892_RS25545 PF04898 Glutamate synthase central domain M892_RS25545 PF01645 Conserved region in glutamate synthase M892_RS25545 PF01493 GXGXG motif M892_RS25545 PF00310 Glutamine amidotransferases class-II M892_RS25615 PF01645 Conserved region in glutamate synthase M892_RS25615 PF01493 GXGXG motif M892_RS25615 PF04898 Glutamate synthase central domain M892_RS25615 PF00310 Glutamine amidotransferases class-II M892_RS25920 PF03710 Glutamate-ammonia ligase adenylyltransferase M892_RS25920 PF08335 GlnD PII-uridylyltransferase M892_RS25955 PF01928 CYTH domain M892_RS26235 PF03968 OstA-like protein M892_RS26235 PF04453 LPS transport system D M892_RS26420 PF03880 DbpA RNA binding domain M892_RS26420 PF00270 DEAD/DEAH box helicase M892_RS26420 PF00271 Helicase conserved C-terminal domain M892_RS26515 PF00356 Bacterial regulatory proteins, lacI family M892_RS26600 PF01050 Mannose-6-phosphate isomerase M892_RS26600 PF00483 Nucleotidyl transferase M892_RS26720 PF06082 Exopolysaccharide biosynthesis protein YbjH M892_RS26765 PF00483 Nucleotidyl transferase M892_RS26855 PF02441 Flavoprotein M892_RS26855 PF04127 DNA / pantothenate metabolism flavoprotein M892_RS27265 PF02646 RmuC family M892_RS27375 PF03480 Bacterial extracellular solute-binding protein, family 7 M892_RS27695 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) M892_RS27830 PF01609 Transposase DDE domain M892_RS27830 PF02281 Transposase Tn5 dimerisation domain M892_RS27830 PF14706 Transposase DNA-binding M892_RS27835 PF13007 Transposase C of IS166 homeodomain M892_RS27835 PF13817 IS66 C-terminal element M892_RS27835 PF13005 zinc-finger binding domain of transposase IS66 M892_RS27835 PF03050 Transposase IS66 family M892_RS27860 PF01548 Transposase M892_RS27860 PF02371 Transposase IS116/IS110/IS902 family M892_RS27865 PF13737 Transposase DDE domain M892_RS27870 PF01548 Transposase M892_RS27870 PF02371 Transposase IS116/IS110/IS902 family M892_RS27875 PF02371 Transposase IS116/IS110/IS902 family M892_RS27875 PF01548 Transposase M892_RS27880 PF01548 Transposase M892_RS27880 PF02371 Transposase IS116/IS110/IS902 family M892_RS27905 PF02371 Transposase IS116/IS110/IS902 family M892_RS27905 PF01548 Transposase M892_RS27940 PF05128 Domain of unknown function (DUF697)