locus-tag class description VAA049_RS00005 PF00308 Bacterial dnaA protein VAA049_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix VAA049_RS00005 PF11638 DnaA N-terminal domain VAA049_RS00010 PF02767 DNA polymerase III beta subunit, central domain VAA049_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain VAA049_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain VAA049_RS00015 PF02463 RecF/RecN/SMC N terminal domain VAA049_RS00020 PF01751 Toprim domain VAA049_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS00020 PF18053 DNA gyrase B subunit insert domain VAA049_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus VAA049_RS00020 PF00204 DNA gyrase B VAA049_RS00035 PF00011 Hsp20/alpha crystallin family VAA049_RS00040 PF00155 Aminotransferase class I and II VAA049_RS00045 PF02092 Glycyl-tRNA synthetase beta subunit VAA049_RS00045 PF05746 DALR anticodon binding domain VAA049_RS00050 PF02091 Glycyl-tRNA synthetase alpha subunit VAA049_RS00055 PF01169 Uncharacterized protein family UPF0016 VAA049_RS00065 PF01206 Sulfurtransferase TusA VAA049_RS00075 PF00107 Zinc-binding dehydrogenase VAA049_RS00075 PF08240 Alcohol dehydrogenase GroES-like domain VAA049_RS00085 PF00291 Pyridoxal-phosphate dependent enzyme VAA049_RS00085 PF00585 C-terminal regulatory domain of Threonine dehydratase VAA049_RS00090 PF00920 Dehydratase family VAA049_RS00095 PF01063 Amino-transferase class IV VAA049_RS00105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA049_RS00105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAA049_RS00105 PF00205 Thiamine pyrophosphate enzyme, central domain VAA049_RS00110 PF01078 Magnesium chelatase, subunit ChlI VAA049_RS00110 PF13335 Magnesium chelatase, subunit ChlI C-terminal VAA049_RS00115 PF01553 Acyltransferase VAA049_RS00120 PF01323 DSBA-like thioredoxin domain VAA049_RS00125 PF01636 Phosphotransferase enzyme family VAA049_RS00130 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VAA049_RS00130 PF12801 4Fe-4S binding domain VAA049_RS00130 PF13746 4Fe-4S dicluster domain VAA049_RS00135 PF06288 Protein of unknown function (DUF1040) VAA049_RS00145 PF07070 SpoOM protein VAA049_RS00150 PF03006 Haemolysin-III related VAA049_RS00160 PF02386 Cation transport protein VAA049_RS00165 PF02080 TrkA-C domain VAA049_RS00165 PF02254 TrkA-N domain VAA049_RS00170 PF01189 16S rRNA methyltransferase RsmB/F VAA049_RS00170 PF01029 NusB family VAA049_RS00175 PF02911 Formyl transferase, C-terminal domain VAA049_RS00175 PF00551 Formyl transferase VAA049_RS00180 PF01327 Polypeptide deformylase VAA049_RS00185 PF01476 LysM domain VAA049_RS00190 PF17782 DprA winged helix domain VAA049_RS00190 PF02481 DNA recombination-mediator protein A VAA049_RS00195 PF04361 Protein of unknown function (DUF494) VAA049_RS00200 PF01396 Topoisomerase DNA binding C4 zinc finger VAA049_RS00205 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VAA049_RS00205 PF02222 ATP-grasp domain VAA049_RS00210 PF00731 AIR carboxylase VAA049_RS00215 PF01300 Telomere recombination VAA049_RS00220 PF01218 Coproporphyrinogen III oxidase VAA049_RS00225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VAA049_RS00225 PF01488 Shikimate / quinate 5-dehydrogenase VAA049_RS00225 PF08501 Shikimate dehydrogenase substrate binding domain VAA049_RS00235 PF00132 Bacterial transferase hexapeptide (six repeats) VAA049_RS00275 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VAA049_RS00280 PF13667 ThiC-associated domain VAA049_RS00280 PF01964 Radical SAM ThiC family VAA049_RS00285 PF02581 Thiamine monophosphate synthase VAA049_RS00290 PF00899 ThiF family VAA049_RS00295 PF02597 ThiS family VAA049_RS00300 PF05690 Thiazole biosynthesis protein ThiG VAA049_RS00305 PF04055 Radical SAM superfamily VAA049_RS00305 PF06968 Biotin and Thiamin Synthesis associated domain VAA049_RS00310 PF01321 Creatinase/Prolidase N-terminal domain VAA049_RS00310 PF00557 Metallopeptidase family M24 VAA049_RS00310 PF00557 Metallopeptidase family M24 VAA049_RS00310 PF01321 Creatinase/Prolidase N-terminal domain VAA049_RS00315 PF03466 LysR substrate binding domain VAA049_RS00315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS00320 PF07690 Major Facilitator Superfamily VAA049_RS00330 PF01037 Lrp/AsnC ligand binding domain VAA049_RS00335 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS00335 PF08448 PAS fold VAA049_RS00335 PF00563 EAL domain VAA049_RS00340 PF04445 Putative SAM-dependent methyltransferase VAA049_RS00350 PF00892 EamA-like transporter family VAA049_RS00355 PF00582 Universal stress protein family VAA049_RS00365 PF00210 Ferritin-like domain VAA049_RS00370 PF10625 Universal stress protein B (UspB) VAA049_RS00385 PF02646 RmuC family VAA049_RS00390 PF01209 ubiE/COQ5 methyltransferase family VAA049_RS00395 PF02036 SCP-2 sterol transfer family VAA049_RS00400 PF03109 ABC1 family VAA049_RS00405 PF02416 mttA/Hcf106 family VAA049_RS00410 PF02416 mttA/Hcf106 family VAA049_RS00415 PF00902 Sec-independent protein translocase protein (TatC) VAA049_RS00420 PF00034 Cytochrome c VAA049_RS00420 PF03150 Di-haem cytochrome c peroxidase VAA049_RS00425 PF01554 MatE VAA049_RS00435 PF01726 LexA DNA binding domain VAA049_RS00435 PF00717 Peptidase S24-like VAA049_RS00440 PF01553 Acyltransferase VAA049_RS00445 PF01040 UbiA prenyltransferase family VAA049_RS00450 PF04345 Chorismate lyase VAA049_RS00460 PF03748 Flagellar basal body-associated protein FliL VAA049_RS00465 PF02203 Tar ligand binding domain homologue VAA049_RS00465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS00465 PF00672 HAMP domain VAA049_RS00470 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VAA049_RS00470 PF01694 Rhomboid family VAA049_RS00475 PF00581 Rhodanese-like domain VAA049_RS00485 PF01026 TatD related DNase VAA049_RS00490 PF00490 Delta-aminolevulinic acid dehydratase VAA049_RS00500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VAA049_RS00500 PF01612 3'-5' exonuclease VAA049_RS00500 PF01367 5'-3' exonuclease, C-terminal SAM fold VAA049_RS00500 PF00476 DNA polymerase family A VAA049_RS00505 PF01926 50S ribosome-binding GTPase VAA049_RS00510 PF00034 Cytochrome c VAA049_RS00520 PF04220 Der GTPase activator (YihI) VAA049_RS00525 PF10675 Protein of unknown function (DUF2489) VAA049_RS00530 PF04055 Radical SAM superfamily VAA049_RS00530 PF06969 HemN C-terminal domain VAA049_RS00535 PF07219 HemY protein N-terminus VAA049_RS00540 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VAA049_RS00545 PF02602 Uroporphyrinogen-III synthase HemD VAA049_RS00550 PF03900 Porphobilinogen deaminase, C-terminal domain VAA049_RS00550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VAA049_RS00560 PF01295 Adenylate cyclase, class-I VAA049_RS00560 PF12633 Adenylate cyclase NT domain VAA049_RS00565 PF01491 Frataxin-like domain VAA049_RS00575 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VAA049_RS00575 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VAA049_RS00580 PF01678 Diaminopimelate epimerase VAA049_RS00585 PF04340 Protein of unknown function, DUF484 VAA049_RS00590 PF00589 Phage integrase family VAA049_RS00590 PF02899 Phage integrase, N-terminal SAM-like domain VAA049_RS00595 PF13419 Haloacid dehalogenase-like hydrolase VAA049_RS00600 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS00600 PF08495 FIST N domain VAA049_RS00600 PF10442 FIST C domain VAA049_RS00600 PF00563 EAL domain VAA049_RS00625 PF12146 Serine aminopeptidase, S33 VAA049_RS00630 PF01810 LysE type translocator VAA049_RS00635 PF00563 EAL domain VAA049_RS00635 PF08668 HDOD domain VAA049_RS00640 PF00210 Ferritin-like domain VAA049_RS00680 PF02881 SRP54-type protein, helical bundle domain VAA049_RS00680 PF00448 SRP54-type protein, GTPase domain VAA049_RS00685 PF00005 ABC transporter VAA049_RS00690 PF18075 FtsX extracellular domain VAA049_RS00695 PF04545 Sigma-70, region 4 VAA049_RS00695 PF04542 Sigma-70 region 2 VAA049_RS00695 PF00140 Sigma-70 factor, region 1.2 VAA049_RS00700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAA049_RS00700 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS00705 PF00440 Bacterial regulatory proteins, tetR family VAA049_RS00715 PF05958 tRNA (Uracil-5-)-methyltransferase VAA049_RS00720 PF00593 TonB dependent receptor VAA049_RS00720 PF07715 TonB-dependent Receptor Plug Domain VAA049_RS00725 PF05922 Peptidase inhibitor I9 VAA049_RS00725 PF00082 Subtilase family VAA049_RS00725 PF04151 Bacterial pre-peptidase C-terminal domain VAA049_RS00730 PF01177 Asp/Glu/Hydantoin racemase VAA049_RS00795 PF00962 Adenosine/AMP deaminase VAA049_RS00800 PF00563 EAL domain VAA049_RS00800 PF13188 PAS domain VAA049_RS00800 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS00800 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS00805 PF00158 Sigma-54 interaction domain VAA049_RS00805 PF00072 Response regulator receiver domain VAA049_RS00805 PF02954 Bacterial regulatory protein, Fis family VAA049_RS00810 PF00989 PAS fold VAA049_RS00810 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS00810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS00820 PF00120 Glutamine synthetase, catalytic domain VAA049_RS00820 PF03951 Glutamine synthetase, beta-Grasp domain VAA049_RS00830 PF03144 Elongation factor Tu domain 2 VAA049_RS00830 PF00009 Elongation factor Tu GTP binding domain VAA049_RS00830 PF00679 Elongation factor G C-terminus VAA049_RS00840 PF03631 Virulence factor BrkB VAA049_RS00845 PF02580 D-Tyr-tRNA(Tyr) deacylase VAA049_RS00850 PF09500 Putative thioesterase (yiiD_Cterm) VAA049_RS00850 PF00583 Acetyltransferase (GNAT) family VAA049_RS00860 PF01293 Phosphoenolpyruvate carboxykinase VAA049_RS00865 PF01430 Hsp33 protein VAA049_RS00870 PF01479 S4 domain VAA049_RS00875 PF11356 Type II secretion system protein C VAA049_RS00880 PF03958 Bacterial type II/III secretion system short domain VAA049_RS00880 PF00263 Bacterial type II and III secretion system protein VAA049_RS00885 PF00437 Type II/IV secretion system protein VAA049_RS00890 PF00482 Type II secretion system (T2SS), protein F VAA049_RS00895 PF08334 Type II secretion system (T2SS), protein G VAA049_RS00895 PF07963 Prokaryotic N-terminal methylation motif VAA049_RS00900 PF12019 Type II transport protein GspH VAA049_RS00905 PF07963 Prokaryotic N-terminal methylation motif VAA049_RS00905 PF02501 Type II secretion system (T2SS), protein I VAA049_RS00910 PF07963 Prokaryotic N-terminal methylation motif VAA049_RS00910 PF11612 Type II secretion system (T2SS), protein J VAA049_RS00915 PF03934 Type II secretion system (T2SS), protein K VAA049_RS00920 PF12693 GspL periplasmic domain VAA049_RS00920 PF05134 Type II secretion system (T2SS), protein L VAA049_RS00925 PF04612 Type II secretion system (T2SS), protein M VAA049_RS00930 PF01203 Type II secretion system (T2SS), protein N VAA049_RS00935 PF00459 Inositol monophosphatase family VAA049_RS00940 PF00293 NUDIX domain VAA049_RS00945 PF01521 Iron-sulphur cluster biosynthesis VAA049_RS00945 PF01106 NifU-like domain VAA049_RS00950 PF00156 Phosphoribosyl transferase domain VAA049_RS00955 PF00561 alpha/beta hydrolase fold VAA049_RS00965 PF00575 S1 RNA binding domain VAA049_RS00965 PF16921 Tex protein YqgF-like domain VAA049_RS00965 PF09371 Tex-like protein N-terminal domain VAA049_RS00965 PF17674 HHH domain VAA049_RS00970 PF01272 Transcription elongation factor, GreA/GreB, C-term VAA049_RS00970 PF03449 Transcription elongation factor, N-terminal VAA049_RS00985 PF00005 ABC transporter VAA049_RS00990 PF02653 Branched-chain amino acid transport system / permease component VAA049_RS00995 PF00933 Glycosyl hydrolase family 3 N terminal domain VAA049_RS00995 PF01915 Glycosyl hydrolase family 3 C-terminal domain VAA049_RS01000 PF08329 Chitinase A, N-terminal domain VAA049_RS01000 PF00704 Glycosyl hydrolases family 18 VAA049_RS01005 PF14706 Transposase DNA-binding VAA049_RS01005 PF02281 Transposase Tn5 dimerisation domain VAA049_RS01005 PF01609 Transposase DDE domain VAA049_RS01010 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS01010 PF00072 Response regulator receiver domain VAA049_RS01015 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS01015 PF00672 HAMP domain VAA049_RS01020 PF00860 Permease family VAA049_RS01025 PF00271 Helicase conserved C-terminal domain VAA049_RS01025 PF00270 DEAD/DEAH box helicase VAA049_RS01025 PF17191 RecG wedge domain VAA049_RS01030 PF04607 Region found in RelA / SpoT proteins VAA049_RS01030 PF13291 ACT domain VAA049_RS01030 PF02824 TGS domain VAA049_RS01035 PF01192 RNA polymerase Rpb6 VAA049_RS01040 PF00625 Guanylate kinase VAA049_RS01045 PF02592 Putative vitamin uptake transporter VAA049_RS01050 PF00474 Sodium:solute symporter family VAA049_RS01060 PF00999 Sodium/hydrogen exchanger family VAA049_RS01060 PF02080 TrkA-C domain VAA049_RS01060 PF03471 Transporter associated domain VAA049_RS01065 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS01065 PF00072 Response regulator receiver domain VAA049_RS01070 PF02683 Cytochrome C biogenesis protein transmembrane region VAA049_RS01070 PF11412 Disulphide bond corrector protein DsbC VAA049_RS01075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAA049_RS01075 PF11852 Domain of unknown function (DUF3372) VAA049_RS01075 PF03714 Bacterial pullanase-associated domain VAA049_RS01075 PF18494 Pullulanase Ins domain VAA049_RS01075 PF17967 Pullulanase N2 domain VAA049_RS01080 PF03605 Anaerobic c4-dicarboxylate membrane transporter VAA049_RS01085 PF10415 Fumarase C C-terminus VAA049_RS01085 PF00206 Lyase VAA049_RS01090 PF17158 Membrane-associated sensor, integral membrane domain VAA049_RS01090 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS01095 PF04186 FxsA cytoplasmic membrane protein VAA049_RS01100 PF00588 SpoU rRNA Methylase family VAA049_RS01105 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VAA049_RS01105 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VAA049_RS01110 PF16527 Two-component sensor protein CpxA, periplasmic domain VAA049_RS01110 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS01110 PF00672 HAMP domain VAA049_RS01115 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS01115 PF00072 Response regulator receiver domain VAA049_RS01125 PF16916 Dimerisation domain of Zinc Transporter VAA049_RS01125 PF01545 Cation efflux family VAA049_RS01130 PF00365 Phosphofructokinase VAA049_RS01135 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VAA049_RS01140 PF06005 Cell division protein ZapB VAA049_RS01145 PF02219 Methylenetetrahydrofolate reductase VAA049_RS01150 PF03447 Homoserine dehydrogenase, NAD binding domain VAA049_RS01150 PF00696 Amino acid kinase family VAA049_RS01150 PF00742 Homoserine dehydrogenase VAA049_RS01155 PF01053 Cys/Met metabolism PLP-dependent enzyme VAA049_RS01160 PF01340 Met Apo-repressor, MetJ VAA049_RS01165 PF03949 Malic enzyme, NAD binding domain VAA049_RS01165 PF00390 Malic enzyme, N-terminal domain VAA049_RS01170 PF01197 Ribosomal protein L31 VAA049_RS01175 PF17764 3′ DNA-binding domain (3′BD) VAA049_RS01175 PF18074 Primosomal protein N C-terminal domain VAA049_RS01175 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VAA049_RS01175 PF00271 Helicase conserved C-terminal domain VAA049_RS01175 PF00270 DEAD/DEAH box helicase VAA049_RS01180 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS01185 PF05036 Sporulation related domain VAA049_RS01190 PF00227 Proteasome subunit VAA049_RS01195 PF00004 ATPase family associated with various cellular activities (AAA) VAA049_RS01195 PF10431 C-terminal, D2-small domain, of ClpB protein VAA049_RS01195 PF07724 AAA domain (Cdc48 subfamily) VAA049_RS01200 PF01040 UbiA prenyltransferase family VAA049_RS01205 PF03737 Aldolase/RraA VAA049_RS01210 PF01554 MatE VAA049_RS01215 PF00121 Triosephosphate isomerase VAA049_RS01235 PF00455 DeoR C terminal sensor domain VAA049_RS01235 PF08220 DeoR-like helix-turn-helix domain VAA049_RS01240 PF00166 Chaperonin 10 Kd subunit VAA049_RS01245 PF00118 TCP-1/cpn60 chaperonin family VAA049_RS01255 PF04055 Radical SAM superfamily VAA049_RS01260 PF09285 Elongation factor P, C-terminal VAA049_RS01260 PF08207 Elongation factor P (EF-P) KOW-like domain VAA049_RS01260 PF01132 Elongation factor P (EF-P) OB domain VAA049_RS01265 PF02313 Fumarate reductase subunit D VAA049_RS01270 PF02300 Fumarate reductase subunit C VAA049_RS01275 PF13085 2Fe-2S iron-sulfur cluster binding domain VAA049_RS01275 PF13183 4Fe-4S dicluster domain VAA049_RS01280 PF02910 Fumarate reductase flavoprotein C-term VAA049_RS01280 PF00890 FAD binding domain VAA049_RS01285 PF00152 tRNA synthetases class II (D, K and N) VAA049_RS01290 PF00581 Rhodanese-like domain VAA049_RS01295 PF02556 Preprotein translocase subunit SecB VAA049_RS01300 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VAA049_RS01300 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VAA049_RS01305 PF06426 Serine acetyltransferase, N-terminal VAA049_RS01305 PF00132 Bacterial transferase hexapeptide (six repeats) VAA049_RS01315 PF00311 Phosphoenolpyruvate carboxylase VAA049_RS01320 PF07687 Peptidase dimerisation domain VAA049_RS01320 PF01546 Peptidase family M20/M25/M40 VAA049_RS01325 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAA049_RS01325 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAA049_RS01330 PF00696 Amino acid kinase family VAA049_RS01335 PF00764 Arginosuccinate synthase VAA049_RS01340 PF00206 Lyase VAA049_RS01340 PF14698 Argininosuccinate lyase C-terminal VAA049_RS01350 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS01350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAA049_RS01355 PF08534 Redoxin VAA049_RS01355 PF00462 Glutaredoxin VAA049_RS01360 PF03466 LysR substrate binding domain VAA049_RS01360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS01365 PF17092 Penicillin-binding protein OB-like domain VAA049_RS01365 PF00905 Penicillin binding protein transpeptidase domain VAA049_RS01365 PF00912 Transglycosylase VAA049_RS01385 PF04351 Pilus assembly protein, PilP VAA049_RS01390 PF11741 AMIN domain VAA049_RS01390 PF07660 Secretin and TonB N terminus short domain VAA049_RS01390 PF00263 Bacterial type II and III secretion system protein VAA049_RS01390 PF03958 Bacterial type II/III secretion system short domain VAA049_RS01395 PF01202 Shikimate kinase VAA049_RS01400 PF01761 3-dehydroquinate synthase VAA049_RS01410 PF02086 D12 class N6 adenine-specific DNA methyltransferase VAA049_RS01415 PF00834 Ribulose-phosphate 3 epimerase family VAA049_RS01420 PF13419 Haloacid dehalogenase-like hydrolase VAA049_RS01425 PF00579 tRNA synthetases class I (W and Y) VAA049_RS01440 PF04055 Radical SAM superfamily VAA049_RS01440 PF18693 TRAM domain VAA049_RS01440 PF00919 Uncharacterized protein family UPF0004 VAA049_RS01445 PF00117 Glutamine amidotransferase class-I VAA049_RS01450 PF00202 Aminotransferase class-III VAA049_RS01455 PF04958 Arginine N-succinyltransferase beta subunit VAA049_RS01460 PF00171 Aldehyde dehydrogenase family VAA049_RS01470 PF13545 Crp-like helix-turn-helix domain VAA049_RS01470 PF00027 Cyclic nucleotide-binding domain VAA049_RS01475 PF00485 Phosphoribulokinase / Uridine kinase family VAA049_RS01480 PF06794 Uncharacterised protein family (UPF0270) VAA049_RS01485 PF00561 alpha/beta hydrolase fold VAA049_RS01495 PF12848 ABC transporter VAA049_RS01495 PF00005 ABC transporter VAA049_RS01500 PF02525 Flavodoxin-like fold VAA049_RS01505 PF00999 Sodium/hydrogen exchanger family VAA049_RS01505 PF02254 TrkA-N domain VAA049_RS01515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA049_RS01520 PF01112 Asparaginase VAA049_RS01525 PF00709 Adenylosuccinate synthetase VAA049_RS01530 PF08238 Sel1 repeat VAA049_RS01535 PF00884 Sulfatase VAA049_RS01535 PF11893 Domain of unknown function (DUF3413) VAA049_RS01540 PF00773 RNB domain VAA049_RS01540 PF00575 S1 RNA binding domain VAA049_RS01540 PF08206 Ribonuclease B OB domain VAA049_RS01540 PF08461 Ribonuclease R winged-helix domain VAA049_RS01540 PF17876 Cold shock domain VAA049_RS01545 PF08032 RNA 2'-O ribose methyltransferase substrate binding VAA049_RS01545 PF00588 SpoU rRNA Methylase family VAA049_RS01550 PF00338 Ribosomal protein S10p/S20e VAA049_RS01555 PF00297 Ribosomal protein L3 VAA049_RS01560 PF00573 Ribosomal protein L4/L1 family VAA049_RS01565 PF00276 Ribosomal protein L23 VAA049_RS01570 PF00181 Ribosomal Proteins L2, RNA binding domain VAA049_RS01570 PF03947 Ribosomal Proteins L2, C-terminal domain VAA049_RS01575 PF00203 Ribosomal protein S19 VAA049_RS01580 PF00237 Ribosomal protein L22p/L17e VAA049_RS01585 PF00189 Ribosomal protein S3, C-terminal domain VAA049_RS01585 PF07650 KH domain VAA049_RS01590 PF00252 Ribosomal protein L16p/L10e VAA049_RS01595 PF00831 Ribosomal L29 protein VAA049_RS01600 PF00366 Ribosomal protein S17 VAA049_RS01605 PF00238 Ribosomal protein L14p/L23e VAA049_RS01610 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VAA049_RS01610 PF00467 KOW motif VAA049_RS01615 PF00281 Ribosomal protein L5 VAA049_RS01615 PF00673 ribosomal L5P family C-terminus VAA049_RS01620 PF00253 Ribosomal protein S14p/S29e VAA049_RS01625 PF00410 Ribosomal protein S8 VAA049_RS01630 PF00347 Ribosomal protein L6 VAA049_RS01635 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VAA049_RS01640 PF00333 Ribosomal protein S5, N-terminal domain VAA049_RS01640 PF03719 Ribosomal protein S5, C-terminal domain VAA049_RS01645 PF00327 Ribosomal protein L30p/L7e VAA049_RS01650 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A VAA049_RS01655 PF00344 SecY translocase VAA049_RS01660 PF00444 Ribosomal protein L36 VAA049_RS01665 PF00416 Ribosomal protein S13/S18 VAA049_RS01670 PF00411 Ribosomal protein S11 VAA049_RS01675 PF00163 Ribosomal protein S4/S9 N-terminal domain VAA049_RS01675 PF01479 S4 domain VAA049_RS01680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VAA049_RS01680 PF01000 RNA polymerase Rpb3/RpoA insert domain VAA049_RS01680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VAA049_RS01685 PF01196 Ribosomal protein L17 VAA049_RS01695 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA049_RS01695 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VAA049_RS01700 PF08525 Opacity-associated protein A N-terminal motif VAA049_RS01700 PF04225 Opacity-associated protein A LysM-like domain VAA049_RS01705 PF00892 EamA-like transporter family VAA049_RS01710 PF13673 Acetyltransferase (GNAT) domain VAA049_RS01715 PF00270 DEAD/DEAH box helicase VAA049_RS01715 PF03880 DbpA RNA binding domain VAA049_RS01715 PF00271 Helicase conserved C-terminal domain VAA049_RS01725 PF02872 5'-nucleotidase, C-terminal domain VAA049_RS01725 PF00149 Calcineurin-like phosphoesterase VAA049_RS01730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAA049_RS01730 PF10414 Sirohaem synthase dimerisation region VAA049_RS01730 PF14824 Sirohaem biosynthesis protein central VAA049_RS01735 PF01507 Phosphoadenosine phosphosulfate reductase family VAA049_RS01740 PF00009 Elongation factor Tu GTP binding domain VAA049_RS01765 PF00005 ABC transporter VAA049_RS01775 PF10795 Protein of unknown function (DUF2607) VAA049_RS01780 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VAA049_RS01785 PF01625 Peptide methionine sulfoxide reductase VAA049_RS01790 PF17243 POTRA domain TamA domain 1 VAA049_RS01790 PF07244 Surface antigen variable number repeat VAA049_RS01790 PF01103 Surface antigen VAA049_RS01795 PF04357 TamB, inner membrane protein subunit of TAM complex VAA049_RS01800 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VAA049_RS01805 PF00719 Inorganic pyrophosphatase VAA049_RS01810 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VAA049_RS01820 PF01225 Mur ligase family, catalytic domain VAA049_RS01820 PF08245 Mur ligase middle domain VAA049_RS01820 PF02875 Mur ligase family, glutamate ligase domain VAA049_RS01825 PF02441 Flavoprotein VAA049_RS01835 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS01840 PF00005 ABC transporter VAA049_RS01845 PF04751 Protein of unknown function (DUF615) VAA049_RS01850 PF01523 Putative modulator of DNA gyrase VAA049_RS01855 PF01769 Divalent cation transporter VAA049_RS01855 PF03448 MgtE intracellular N domain VAA049_RS01855 PF00571 CBS domain VAA049_RS01860 PF00381 PTS HPr component phosphorylation site VAA049_RS01865 PF03668 P-loop ATPase protein family VAA049_RS01870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAA049_RS01875 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VAA049_RS01880 PF00309 Sigma-54 factor, Activator interacting domain (AID) VAA049_RS01880 PF04963 Sigma-54 factor, core binding domain VAA049_RS01880 PF04552 Sigma-54, DNA binding domain VAA049_RS01885 PF00005 ABC transporter VAA049_RS01885 PF12399 Branched-chain amino acid ATP-binding cassette transporter VAA049_RS01890 PF03968 OstA-like protein VAA049_RS01905 PF00571 CBS domain VAA049_RS01905 PF01380 SIS domain VAA049_RS01910 PF01699 Sodium/calcium exchanger protein VAA049_RS01920 PF00005 ABC transporter VAA049_RS01925 PF02405 Permease MlaE VAA049_RS01930 PF02470 MlaD protein VAA049_RS01935 PF05494 MlaC protein VAA049_RS01945 PF01722 BolA-like protein VAA049_RS01950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VAA049_RS01955 PF01553 Acyltransferase VAA049_RS01960 PF01042 Endoribonuclease L-PSP VAA049_RS01965 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VAA049_RS01965 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VAA049_RS01970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAA049_RS01970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAA049_RS01975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VAA049_RS01975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VAA049_RS01980 PF13638 PIN domain VAA049_RS01980 PF02562 PhoH-like protein VAA049_RS01990 PF00271 Helicase conserved C-terminal domain VAA049_RS01990 PF18339 RapA N-terminal Tudor like domain 1 VAA049_RS01990 PF00176 SNF2 family N-terminal domain VAA049_RS01990 PF12137 RNA polymerase recycling family C-terminal VAA049_RS01990 PF18337 RapA N-terminal Tudor like domain VAA049_RS01995 PF00849 RNA pseudouridylate synthase VAA049_RS02000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA049_RS02000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAA049_RS02005 PF10458 Valyl tRNA synthetase tRNA binding arm VAA049_RS02005 PF00133 tRNA synthetases class I (I, L, M and V) VAA049_RS02005 PF08264 Anticodon-binding domain of tRNA VAA049_RS02010 PF04364 DNA polymerase III chi subunit, HolC VAA049_RS02015 PF02789 Cytosol aminopeptidase family, N-terminal domain VAA049_RS02015 PF00883 Cytosol aminopeptidase family, catalytic domain VAA049_RS02020 PF03739 Lipopolysaccharide export system permease LptF/LptG VAA049_RS02025 PF03739 Lipopolysaccharide export system permease LptF/LptG VAA049_RS02040 PF00072 Response regulator receiver domain VAA049_RS02085 PF00694 Aconitase C-terminal domain VAA049_RS02090 PF00330 Aconitase family (aconitate hydratase) VAA049_RS02095 PF00180 Isocitrate/isopropylmalate dehydrogenase VAA049_RS02100 PF00682 HMGL-like VAA049_RS02100 PF08502 LeuA allosteric (dimerisation) domain VAA049_RS02110 PF01569 PAP2 superfamily VAA049_RS02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS02120 PF03466 LysR substrate binding domain VAA049_RS02125 PF00501 AMP-binding enzyme VAA049_RS02130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAA049_RS02130 PF00205 Thiamine pyrophosphate enzyme, central domain VAA049_RS02130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA049_RS02135 PF10369 Small subunit of acetolactate synthase VAA049_RS02140 PF01842 ACT domain VAA049_RS02140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA049_RS02140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAA049_RS02145 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VAA049_RS02150 PF01812 5-formyltetrahydrofolate cyclo-ligase family VAA049_RS02155 PF05164 Cell division protein ZapA VAA049_RS02160 PF03695 Uncharacterised protein family (UPF0149) VAA049_RS02165 PF01494 FAD binding domain VAA049_RS02170 PF01494 FAD binding domain VAA049_RS02185 PF03937 Flavinator of succinate dehydrogenase VAA049_RS02195 PF02910 Fumarate reductase flavoprotein C-term VAA049_RS02195 PF00890 FAD binding domain VAA049_RS02205 PF04542 Sigma-70 region 2 VAA049_RS02205 PF08281 Sigma-70, region 4 VAA049_RS02210 PF03872 Anti sigma-E protein RseA, N-terminal domain VAA049_RS02210 PF03873 Anti sigma-E protein RseA, C-terminal domain VAA049_RS02215 PF03888 MucB/RseB N-terminal domain VAA049_RS02215 PF17188 MucB/RseB C-terminal domain VAA049_RS02225 PF06421 GTP-binding protein LepA C-terminus VAA049_RS02225 PF03144 Elongation factor Tu domain 2 VAA049_RS02225 PF00009 Elongation factor Tu GTP binding domain VAA049_RS02225 PF00679 Elongation factor G C-terminus VAA049_RS02230 PF10502 Signal peptidase, peptidase S26 VAA049_RS02235 PF14622 Ribonuclease-III-like VAA049_RS02235 PF00035 Double-stranded RNA binding motif VAA049_RS02240 PF07650 KH domain VAA049_RS02240 PF01926 50S ribosome-binding GTPase VAA049_RS02245 PF02565 Recombination protein O C terminal VAA049_RS02245 PF11967 Recombination protein O N terminal VAA049_RS02250 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VAA049_RS02255 PF01648 4'-phosphopantetheinyl transferase superfamily VAA049_RS02270 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS02275 PF00072 Response regulator receiver domain VAA049_RS02275 PF01627 Hpt domain VAA049_RS02275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VAA049_RS02275 PF00672 HAMP domain VAA049_RS02275 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS02280 PF01938 TRAM domain VAA049_RS02280 PF05958 tRNA (Uracil-5-)-methyltransferase VAA049_RS02285 PF02824 TGS domain VAA049_RS02285 PF13291 ACT domain VAA049_RS02285 PF04607 Region found in RelA / SpoT proteins VAA049_RS02290 PF03819 MazG nucleotide pyrophosphohydrolase domain VAA049_RS02295 PF06418 CTP synthase N-terminus VAA049_RS02295 PF00117 Glutamine amidotransferase class-I VAA049_RS02300 PF00113 Enolase, C-terminal TIM barrel domain VAA049_RS02300 PF03952 Enolase, N-terminal domain VAA049_RS02305 PF12627 Probable RNA and SrmB- binding site of polymerase A VAA049_RS02305 PF01966 HD domain VAA049_RS02305 PF01743 Poly A polymerase head domain VAA049_RS02310 PF13401 AAA domain VAA049_RS02310 PF01471 Putative peptidoglycan binding domain VAA049_RS02320 PF08239 Bacterial SH3 domain VAA049_RS02325 PF01384 Phosphate transporter family VAA049_RS02330 PF01865 Protein of unknown function DUF47 VAA049_RS02335 PF01928 CYTH domain VAA049_RS02340 PF02743 Cache domain VAA049_RS02340 PF00672 HAMP domain VAA049_RS02340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS02345 PF03710 Glutamate-ammonia ligase adenylyltransferase VAA049_RS02345 PF08335 GlnD PII-uridylyltransferase VAA049_RS02350 PF01467 Cytidylyltransferase-like VAA049_RS02350 PF00294 pfkB family carbohydrate kinase VAA049_RS02355 PF02321 Outer membrane efflux protein VAA049_RS02360 PF00293 NUDIX domain VAA049_RS02365 PF06853 Protein of unknown function (DUF1249) VAA049_RS02370 PF00149 Calcineurin-like phosphoesterase VAA049_RS02375 PF05728 Uncharacterised protein family (UPF0227) VAA049_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS02380 PF00204 DNA gyrase B VAA049_RS02380 PF01751 Toprim domain VAA049_RS02380 PF00986 DNA gyrase B subunit, carboxyl terminus VAA049_RS02385 PF00521 DNA gyrase/topoisomerase IV, subunit A VAA049_RS02385 PF03989 DNA gyrase C-terminal domain, beta-propeller VAA049_RS02390 PF03884 DNA gyrase inhibitor YacG VAA049_RS02395 PF07072 Cell division protein VAA049_RS02400 PF01121 Dephospho-CoA kinase VAA049_RS02405 PF01478 Type IV leader peptidase family VAA049_RS02405 PF06750 Bacterial Peptidase A24 N-terminal domain VAA049_RS02410 PF00482 Type II secretion system (T2SS), protein F VAA049_RS02415 PF00437 Type II/IV secretion system protein VAA049_RS02415 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VAA049_RS02420 PF07963 Prokaryotic N-terminal methylation motif VAA049_RS02420 PF00114 Pilin (bacterial filament) VAA049_RS02425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VAA049_RS02425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VAA049_RS02430 PF01510 N-acetylmuramoyl-L-alanine amidase VAA049_RS02435 PF00258 Flavodoxin VAA049_RS02440 PF02899 Phage integrase, N-terminal SAM-like domain VAA049_RS02440 PF00589 Phage integrase family VAA049_RS02445 PF10411 Disulfide bond isomerase protein N-terminus VAA049_RS02445 PF13098 Thioredoxin-like domain VAA049_RS02450 PF17768 RecJ OB domain VAA049_RS02450 PF02272 DHHA1 domain VAA049_RS02450 PF01368 DHH family VAA049_RS02455 PF00149 Calcineurin-like phosphoesterase VAA049_RS02455 PF02872 5'-nucleotidase, C-terminal domain VAA049_RS02460 PF07729 FCD domain VAA049_RS02460 PF00392 Bacterial regulatory proteins, gntR family VAA049_RS02465 PF17831 Pyruvate dehydrogenase E1 component middle domain VAA049_RS02465 PF00456 Transketolase, thiamine diphosphate binding domain VAA049_RS02470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAA049_RS02470 PF00364 Biotin-requiring enzyme VAA049_RS02470 PF02817 e3 binding domain VAA049_RS02475 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS02475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAA049_RS02480 PF01795 MraW methylase family VAA049_RS02485 PF04999 Cell division protein FtsL VAA049_RS02490 PF03717 Penicillin-binding Protein dimerisation domain VAA049_RS02490 PF00905 Penicillin binding protein transpeptidase domain VAA049_RS02495 PF01225 Mur ligase family, catalytic domain VAA049_RS02495 PF02875 Mur ligase family, glutamate ligase domain VAA049_RS02495 PF08245 Mur ligase middle domain VAA049_RS02500 PF08245 Mur ligase middle domain VAA049_RS02500 PF01225 Mur ligase family, catalytic domain VAA049_RS02500 PF02875 Mur ligase family, glutamate ligase domain VAA049_RS02505 PF00953 Glycosyl transferase family 4 VAA049_RS02505 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VAA049_RS02510 PF02875 Mur ligase family, glutamate ligase domain VAA049_RS02510 PF08245 Mur ligase middle domain VAA049_RS02515 PF01098 Cell cycle protein VAA049_RS02520 PF03033 Glycosyltransferase family 28 N-terminal domain VAA049_RS02520 PF04101 Glycosyltransferase family 28 C-terminal domain VAA049_RS02525 PF01225 Mur ligase family, catalytic domain VAA049_RS02525 PF02875 Mur ligase family, glutamate ligase domain VAA049_RS02525 PF08245 Mur ligase middle domain VAA049_RS02530 PF03799 Cell division protein FtsQ VAA049_RS02530 PF08478 POTRA domain, FtsQ-type VAA049_RS02535 PF02491 SHS2 domain inserted in FTSA VAA049_RS02540 PF12327 FtsZ family, C-terminal domain VAA049_RS02540 PF00091 Tubulin/FtsZ family, GTPase domain VAA049_RS02545 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VAA049_RS02555 PF07516 SecA Wing and Scaffold domain VAA049_RS02555 PF07517 SecA DEAD-like domain VAA049_RS02555 PF02810 SEC-C motif VAA049_RS02555 PF01043 SecA preprotein cross-linking domain VAA049_RS02565 PF00293 NUDIX domain VAA049_RS02570 PF05173 Dihydrodipicolinate reductase, C-terminus VAA049_RS02570 PF01113 Dihydrodipicolinate reductase, N-terminus VAA049_RS02580 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VAA049_RS02580 PF00117 Glutamine amidotransferase class-I VAA049_RS02585 PF02142 MGS-like domain VAA049_RS02585 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VAA049_RS02585 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAA049_RS02605 PF01925 Sulfite exporter TauE/SafE VAA049_RS02610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS02610 PF03466 LysR substrate binding domain VAA049_RS02615 PF03458 UPF0126 domain VAA049_RS02620 PF01497 Periplasmic binding protein VAA049_RS02630 PF01048 Phosphorylase superfamily VAA049_RS02640 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VAA049_RS02640 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS02645 PF00310 Glutamine amidotransferases class-II VAA049_RS02645 PF01645 Conserved region in glutamate synthase VAA049_RS02645 PF04898 Glutamate synthase central domain VAA049_RS02645 PF01493 GXGXG motif VAA049_RS02650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VAA049_RS02650 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS02655 PF04898 Glutamate synthase central domain VAA049_RS02655 PF01645 Conserved region in glutamate synthase VAA049_RS02655 PF01493 GXGXG motif VAA049_RS02655 PF00310 Glutamine amidotransferases class-II VAA049_RS02660 PF04055 Radical SAM superfamily VAA049_RS02660 PF16199 Radical_SAM C-terminal domain VAA049_RS02665 PF00563 EAL domain VAA049_RS02665 PF01590 GAF domain VAA049_RS02665 PF00360 Phytochrome region VAA049_RS02665 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS02670 PF00989 PAS fold VAA049_RS02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS02670 PF00072 Response regulator receiver domain VAA049_RS02670 PF18415 Histidine kinase receptor ArcB trans-membrane domain VAA049_RS02670 PF01627 Hpt domain VAA049_RS02670 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS02685 PF03737 Aldolase/RraA VAA049_RS02695 PF00696 Amino acid kinase family VAA049_RS02695 PF03447 Homoserine dehydrogenase, NAD binding domain VAA049_RS02695 PF01842 ACT domain VAA049_RS02695 PF13840 ACT domain VAA049_RS02695 PF00742 Homoserine dehydrogenase VAA049_RS02700 PF00288 GHMP kinases N terminal domain VAA049_RS02700 PF08544 GHMP kinases C terminal VAA049_RS02705 PF00291 Pyridoxal-phosphate dependent enzyme VAA049_RS02705 PF14821 Threonine synthase N terminus VAA049_RS02710 PF01228 Glycine radical VAA049_RS02715 PF01261 Xylose isomerase-like TIM barrel VAA049_RS02720 PF03167 Uracil DNA glycosylase superfamily VAA049_RS02735 PF01235 Sodium:alanine symporter family VAA049_RS02740 PF03883 Peroxide stress protein YaaA VAA049_RS02745 PF01026 TatD related DNase VAA049_RS02750 PF01773 Na+ dependent nucleoside transporter N-terminus VAA049_RS02750 PF07670 Nucleoside recognition VAA049_RS02750 PF07662 Na+ dependent nucleoside transporter C-terminus VAA049_RS02760 PF01791 DeoC/LacD family aldolase VAA049_RS02765 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VAA049_RS02765 PF00591 Glycosyl transferase family, a/b domain VAA049_RS02765 PF02885 Glycosyl transferase family, helical bundle domain VAA049_RS02770 PF01676 Metalloenzyme superfamily VAA049_RS02775 PF01048 Phosphorylase superfamily VAA049_RS02785 PF18429 Domain of unknown function (DUF5609) VAA049_RS02795 PF18073 Rubredoxin metal binding domain VAA049_RS02800 PF14492 Elongation Factor G, domain II VAA049_RS02800 PF03764 Elongation factor G, domain IV VAA049_RS02800 PF03144 Elongation factor Tu domain 2 VAA049_RS02800 PF00009 Elongation factor Tu GTP binding domain VAA049_RS02800 PF00679 Elongation factor G C-terminus VAA049_RS02805 PF00501 AMP-binding enzyme VAA049_RS02810 PF00072 Response regulator receiver domain VAA049_RS02820 PF16353 Domain of unknown function(DUF4981) VAA049_RS02820 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VAA049_RS02820 PF00703 Glycosyl hydrolases family 2 VAA049_RS02820 PF02929 Beta galactosidase small chain VAA049_RS02820 PF02837 Glycosyl hydrolases family 2, sugar binding domain VAA049_RS02825 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS02830 PF01588 Putative tRNA binding domain VAA049_RS02840 PF01544 CorA-like Mg2+ transporter protein VAA049_RS02845 PF02080 TrkA-C domain VAA049_RS02845 PF18030 RimK PreATP-grasp domain VAA049_RS02845 PF08443 RimK-like ATP-grasp domain VAA049_RS02850 PF00583 Acetyltransferase (GNAT) family VAA049_RS02860 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VAA049_RS02860 PF14602 Hexapeptide repeat of succinyl-transferase VAA049_RS02865 PF07130 YebG protein VAA049_RS02880 PF17946 RecC C-terminal domain VAA049_RS02885 PF13361 UvrD-like helicase C-terminal domain VAA049_RS02885 PF00580 UvrD/REP helicase N-terminal domain VAA049_RS02885 PF12705 PD-(D/E)XK nuclease superfamily VAA049_RS02890 PF13538 UvrD-like helicase C-terminal domain VAA049_RS02905 PF00696 Amino acid kinase family VAA049_RS02905 PF00583 Acetyltransferase (GNAT) family VAA049_RS02915 PF03562 MltA specific insert domain VAA049_RS02915 PF06725 3D domain VAA049_RS02920 PF00899 ThiF family VAA049_RS02925 PF02657 Fe-S metabolism associated domain VAA049_RS02930 PF00266 Aminotransferase class-V VAA049_RS02935 PF01965 DJ-1/PfpI family VAA049_RS02940 PF02558 Ketopantoate reductase PanE/ApbA VAA049_RS02940 PF08546 Ketopantoate reductase PanE/ApbA C terminal VAA049_RS02945 PF03502 Nucleoside-specific channel-forming protein, Tsx VAA049_RS02955 PF04545 Sigma-70, region 4 VAA049_RS02955 PF04542 Sigma-70 region 2 VAA049_RS02965 PF07690 Major Facilitator Superfamily VAA049_RS02970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VAA049_RS02980 PF05175 Methyltransferase small domain VAA049_RS02985 PF01722 BolA-like protein VAA049_RS02990 PF11973 NQRA C-terminal domain VAA049_RS02990 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VAA049_RS02995 PF03116 NQR2, RnfD, RnfE family VAA049_RS03000 PF04205 FMN-binding domain VAA049_RS03005 PF02508 Rnf-Nqr subunit, membrane protein VAA049_RS03010 PF02508 Rnf-Nqr subunit, membrane protein VAA049_RS03015 PF00175 Oxidoreductase NAD-binding domain VAA049_RS03015 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA049_RS03015 PF00970 Oxidoreductase FAD-binding domain VAA049_RS03020 PF02424 ApbE family VAA049_RS03030 PF00817 impB/mucB/samB family VAA049_RS03030 PF11798 IMS family HHH motif VAA049_RS03040 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS03040 PF17158 Membrane-associated sensor, integral membrane domain VAA049_RS03045 PF00209 Sodium:neurotransmitter symporter family VAA049_RS03055 PF18030 RimK PreATP-grasp domain VAA049_RS03055 PF08443 RimK-like ATP-grasp domain VAA049_RS03060 PF18030 RimK PreATP-grasp domain VAA049_RS03060 PF08443 RimK-like ATP-grasp domain VAA049_RS03065 PF07687 Peptidase dimerisation domain VAA049_RS03065 PF01546 Peptidase family M20/M25/M40 VAA049_RS03070 PF00860 Permease family VAA049_RS03075 PF00156 Phosphoribosyl transferase domain VAA049_RS03080 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VAA049_RS03085 PF07417 Sigma factor-binding transcriptional regulator Crl VAA049_RS03090 PF01472 PUA domain VAA049_RS03090 PF00696 Amino acid kinase family VAA049_RS03095 PF00171 Aldehyde dehydrogenase family VAA049_RS03100 PF03477 ATP cone domain VAA049_RS03105 PF01872 RibD C-terminal domain VAA049_RS03105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAA049_RS03110 PF00677 Lumazine binding domain VAA049_RS03115 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VAA049_RS03115 PF00925 GTP cyclohydrolase II VAA049_RS03120 PF00885 6,7-dimethyl-8-ribityllumazine synthase VAA049_RS03125 PF01029 NusB family VAA049_RS03130 PF00586 AIR synthase related protein, N-terminal domain VAA049_RS03130 PF02769 AIR synthase related protein, C-terminal domain VAA049_RS03135 PF04608 Phosphatidylglycerophosphatase A VAA049_RS03140 PF11944 Protein of unknown function (DUF3461) VAA049_RS03145 PF01909 Nucleotidyltransferase domain VAA049_RS03145 PF01966 HD domain VAA049_RS03145 PF08335 GlnD PII-uridylyltransferase VAA049_RS03150 PF00557 Metallopeptidase family M24 VAA049_RS03155 PF00318 Ribosomal protein S2 VAA049_RS03160 PF00889 Elongation factor TS VAA049_RS03165 PF00696 Amino acid kinase family VAA049_RS03170 PF01765 Ribosome recycling factor VAA049_RS03175 PF01255 Putative undecaprenyl diphosphate synthase VAA049_RS03185 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VAA049_RS03185 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VAA049_RS03185 PF13288 DXP reductoisomerase C-terminal domain VAA049_RS03190 PF17820 PDZ domain VAA049_RS03190 PF02163 Peptidase family M50 VAA049_RS03195 PF01103 Surface antigen VAA049_RS03195 PF07244 Surface antigen variable number repeat VAA049_RS03200 PF03938 Outer membrane protein (OmpH-like) VAA049_RS03205 PF00132 Bacterial transferase hexapeptide (six repeats) VAA049_RS03205 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VAA049_RS03210 PF07977 FabA-like domain VAA049_RS03215 PF00132 Bacterial transferase hexapeptide (six repeats) VAA049_RS03215 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VAA049_RS03220 PF02684 Lipid-A-disaccharide synthetase VAA049_RS03225 PF01351 Ribonuclease HII VAA049_RS03230 PF02811 PHP domain VAA049_RS03230 PF14579 Helix-hairpin-helix motif VAA049_RS03230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VAA049_RS03230 PF07733 Bacterial DNA polymerase III alpha NTPase domain VAA049_RS03230 PF01336 OB-fold nucleic acid binding domain VAA049_RS03235 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VAA049_RS03240 PF01171 PP-loop family VAA049_RS03240 PF11734 TilS substrate C-terminal domain VAA049_RS03240 PF09179 TilS substrate binding domain VAA049_RS03245 PF00034 Cytochrome c VAA049_RS03250 PF05870 Phenolic acid decarboxylase (PAD) VAA049_RS03255 PF00543 Nitrogen regulatory protein P-II VAA049_RS03260 PF03372 Endonuclease/Exonuclease/phosphatase family VAA049_RS03265 PF01476 LysM domain VAA049_RS03265 PF01464 Transglycosylase SLT domain VAA049_RS03270 PF16123 Hydroxyacylglutathione hydrolase C-terminus VAA049_RS03270 PF00753 Metallo-beta-lactamase superfamily VAA049_RS03275 PF08241 Methyltransferase domain VAA049_RS03280 PF00075 RNase H VAA049_RS03285 PF00929 Exonuclease VAA049_RS03295 PF02770 Acyl-CoA dehydrogenase, middle domain VAA049_RS03295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAA049_RS03295 PF09317 Domain of unknown function (DUF1974) VAA049_RS03295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAA049_RS03300 PF13580 SIS domain VAA049_RS03305 PF13230 Glutamine amidotransferases class-II VAA049_RS03310 PF00551 Formyl transferase VAA049_RS03315 PF02769 AIR synthase related protein, C-terminal domain VAA049_RS03315 PF00586 AIR synthase related protein, N-terminal domain VAA049_RS03325 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS03330 PF00849 RNA pseudouridylate synthase VAA049_RS03330 PF01479 S4 domain VAA049_RS03335 PF01713 Smr domain VAA049_RS03355 PF03173 Putative carbohydrate binding domain VAA049_RS03355 PF02838 Glycosyl hydrolase family 20, domain 2 VAA049_RS03355 PF00728 Glycosyl hydrolase family 20, catalytic domain VAA049_RS03355 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VAA049_RS03365 PF00403 Heavy-metal-associated domain VAA049_RS03370 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAA049_RS03375 PF00691 OmpA family VAA049_RS03375 PF01389 OmpA-like transmembrane domain VAA049_RS03385 PF07715 TonB-dependent Receptor Plug Domain VAA049_RS03390 PF04954 Siderophore-interacting protein VAA049_RS03390 PF08021 Siderophore-interacting FAD-binding domain VAA049_RS03395 PF00550 Phosphopantetheine attachment site VAA049_RS03395 PF08242 Methyltransferase domain VAA049_RS03395 PF00668 Condensation domain VAA049_RS03395 PF00501 AMP-binding enzyme VAA049_RS03430 PF01584 CheW-like domain VAA049_RS03430 PF00072 Response regulator receiver domain VAA049_RS03435 PF03705 CheR methyltransferase, all-alpha domain VAA049_RS03435 PF01739 CheR methyltransferase, SAM binding domain VAA049_RS03440 PF00460 Flagella basal body rod protein VAA049_RS03445 PF00460 Flagella basal body rod protein VAA049_RS03445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAA049_RS03450 PF03963 Flagellar hook capping protein - N-terminal region VAA049_RS03450 PF13860 FlgD Ig-like domain VAA049_RS03450 PF13861 FlgD Tudor-like domain VAA049_RS03455 PF00460 Flagella basal body rod protein VAA049_RS03455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAA049_RS03455 PF07559 Flagellar basal body protein FlaE VAA049_RS03460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAA049_RS03460 PF00460 Flagella basal body rod protein VAA049_RS03465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAA049_RS03465 PF00460 Flagella basal body rod protein VAA049_RS03470 PF02107 Flagellar L-ring protein VAA049_RS03475 PF02119 Flagellar P-ring protein VAA049_RS03480 PF10135 Rod binding protein VAA049_RS03480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VAA049_RS03485 PF07196 Flagellin hook IN motif VAA049_RS03485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VAA049_RS03500 PF07196 Flagellin hook IN motif VAA049_RS03500 PF00669 Bacterial flagellin N-terminal helical region VAA049_RS03500 PF00700 Bacterial flagellin C-terminal helical region VAA049_RS03505 PF00700 Bacterial flagellin C-terminal helical region VAA049_RS03505 PF07196 Flagellin hook IN motif VAA049_RS03505 PF00669 Bacterial flagellin N-terminal helical region VAA049_RS03590 PF06071 Protein of unknown function (DUF933) VAA049_RS03590 PF01926 50S ribosome-binding GTPase VAA049_RS03595 PF01195 Peptidyl-tRNA hydrolase VAA049_RS03600 PF14572 Phosphoribosyl synthetase-associated domain VAA049_RS03600 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VAA049_RS03605 PF08544 GHMP kinases C terminal VAA049_RS03605 PF00288 GHMP kinases N terminal domain VAA049_RS03610 PF03550 Outer membrane lipoprotein LolB VAA049_RS03615 PF01488 Shikimate / quinate 5-dehydrogenase VAA049_RS03615 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VAA049_RS03615 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VAA049_RS03620 PF03462 PCRF domain VAA049_RS03620 PF00472 RF-1 domain VAA049_RS03625 PF13847 Methyltransferase domain VAA049_RS03625 PF17827 PrmC N-terminal domain VAA049_RS03630 PF04247 Invasion gene expression up-regulator, SirB VAA049_RS03635 PF13369 Transglutaminase-like superfamily VAA049_RS03640 PF00793 DAHP synthetase I family VAA049_RS03645 PF00149 Calcineurin-like phosphoesterase VAA049_RS03645 PF02872 5'-nucleotidase, C-terminal domain VAA049_RS03650 PF04073 Aminoacyl-tRNA editing domain VAA049_RS03655 PF00860 Permease family VAA049_RS03670 PF03358 NADPH-dependent FMN reductase VAA049_RS03675 PF03960 ArsC family VAA049_RS03680 PF13181 Tetratricopeptide repeat VAA049_RS03680 PF01435 Peptidase family M48 VAA049_RS03690 PF01594 AI-2E family transporter VAA049_RS03695 PF02743 Cache domain VAA049_RS03695 PF00672 HAMP domain VAA049_RS03695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS03700 PF00578 AhpC/TSA family VAA049_RS03710 PF00701 Dihydrodipicolinate synthetase family VAA049_RS03715 PF06804 NlpB/DapX lipoprotein VAA049_RS03725 PF02557 D-alanyl-D-alanine carboxypeptidase VAA049_RS03730 PF01546 Peptidase family M20/M25/M40 VAA049_RS03730 PF07687 Peptidase dimerisation domain VAA049_RS03735 PF03960 ArsC family VAA049_RS03750 PF11143 Protein of unknown function (DUF2919) VAA049_RS03755 PF04261 Dyp-type peroxidase family VAA049_RS03760 PF07196 Flagellin hook IN motif VAA049_RS03760 PF00669 Bacterial flagellin N-terminal helical region VAA049_RS03760 PF00700 Bacterial flagellin C-terminal helical region VAA049_RS03765 PF00669 Bacterial flagellin N-terminal helical region VAA049_RS03765 PF07196 Flagellin hook IN motif VAA049_RS03765 PF00700 Bacterial flagellin C-terminal helical region VAA049_RS03770 PF00669 Bacterial flagellin N-terminal helical region VAA049_RS03770 PF07196 Flagellin hook IN motif VAA049_RS03770 PF00700 Bacterial flagellin C-terminal helical region VAA049_RS03775 PF03646 FlaG protein VAA049_RS03780 PF02465 Flagellar hook-associated protein 2 N-terminus VAA049_RS03780 PF07195 Flagellar hook-associated protein 2 C-terminus VAA049_RS03780 PF07196 Flagellin hook IN motif VAA049_RS03790 PF02561 Flagellar protein FliS VAA049_RS03795 PF00158 Sigma-54 interaction domain VAA049_RS03795 PF06490 Flagellar regulatory protein FleQ VAA049_RS03795 PF02954 Bacterial regulatory protein, Fis family VAA049_RS03800 PF13188 PAS domain VAA049_RS03800 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS03800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS03805 PF00158 Sigma-54 interaction domain VAA049_RS03805 PF02954 Bacterial regulatory protein, Fis family VAA049_RS03805 PF00072 Response regulator receiver domain VAA049_RS03810 PF02049 Flagellar hook-basal body complex protein FliE VAA049_RS03815 PF01514 Secretory protein of YscJ/FliF family VAA049_RS03815 PF08345 Flagellar M-ring protein C-terminal VAA049_RS03820 PF14842 FliG N-terminal domain VAA049_RS03820 PF14841 FliG middle domain VAA049_RS03820 PF01706 FliG C-terminal domain VAA049_RS03825 PF02108 Flagellar assembly protein FliH VAA049_RS03830 PF18269 T3SS EscN ATPase C-terminal domain VAA049_RS03830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAA049_RS03845 PF03748 Flagellar basal body-associated protein FliL VAA049_RS03850 PF02154 Flagellar motor switch protein FliM VAA049_RS03850 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VAA049_RS03855 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VAA049_RS03860 PF04347 Flagellar biosynthesis protein, FliO VAA049_RS03865 PF00813 FliP family VAA049_RS03870 PF01313 Bacterial export proteins, family 3 VAA049_RS03875 PF01311 Bacterial export proteins, family 1 VAA049_RS03880 PF01312 FlhB HrpN YscU SpaS Family VAA049_RS03885 PF01713 Smr domain VAA049_RS03890 PF05175 Methyltransferase small domain VAA049_RS03900 PF01264 Chorismate synthase VAA049_RS03905 PF03458 UPF0126 domain VAA049_RS03910 PF04315 Elongation factor P hydroxylase VAA049_RS03915 PF08891 YfcL protein VAA049_RS03920 PF03358 NADPH-dependent FMN reductase VAA049_RS03925 PF01266 FAD dependent oxidoreductase VAA049_RS03925 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VAA049_RS03930 PF02801 Beta-ketoacyl synthase, C-terminal domain VAA049_RS03930 PF00109 Beta-ketoacyl synthase, N-terminal domain VAA049_RS03935 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA049_RS03935 PF11890 Domain of unknown function (DUF3410) VAA049_RS03935 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAA049_RS03940 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAA049_RS03940 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAA049_RS03945 PF01475 Ferric uptake regulator family VAA049_RS03955 PF03466 LysR substrate binding domain VAA049_RS03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS03960 PF03788 LrgA family VAA049_RS03965 PF04172 LrgB-like family VAA049_RS03970 PF00258 Flavodoxin VAA049_RS03980 PF12697 Alpha/beta hydrolase family VAA049_RS03985 PF17206 SeqA protein N-terminal domain VAA049_RS03985 PF03925 SeqA protein C-terminal domain VAA049_RS03990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAA049_RS03990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAA049_RS03990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAA049_RS03990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAA049_RS04000 PF01784 NIF3 (NGG1p interacting factor 3) VAA049_RS04005 PF00285 Citrate synthase, C-terminal domain VAA049_RS04010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VAA049_RS04015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VAA049_RS04020 PF00890 FAD binding domain VAA049_RS04020 PF02910 Fumarate reductase flavoprotein C-term VAA049_RS04025 PF13085 2Fe-2S iron-sulfur cluster binding domain VAA049_RS04030 PF02779 Transketolase, pyrimidine binding domain VAA049_RS04030 PF16870 2-oxoglutarate dehydrogenase C-terminal VAA049_RS04030 PF00676 Dehydrogenase E1 component VAA049_RS04030 PF16078 2-oxoglutarate dehydrogenase N-terminus VAA049_RS04035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VAA049_RS04035 PF02817 e3 binding domain VAA049_RS04035 PF00364 Biotin-requiring enzyme VAA049_RS04040 PF00549 CoA-ligase VAA049_RS04040 PF08442 ATP-grasp domain VAA049_RS04045 PF02629 CoA binding domain VAA049_RS04045 PF00549 CoA-ligase VAA049_RS04050 PF00950 ABC 3 transport family VAA049_RS04055 PF00005 ABC transporter VAA049_RS04060 PF01297 Zinc-uptake complex component A periplasmic VAA049_RS04065 PF12833 Helix-turn-helix domain VAA049_RS04065 PF02311 AraC-like ligand binding domain VAA049_RS04070 PF04023 FeoA domain VAA049_RS04075 PF07664 Ferrous iron transport protein B C terminus VAA049_RS04075 PF07670 Nucleoside recognition VAA049_RS04075 PF02421 Ferrous iron transport protein B VAA049_RS04090 PF03485 Arginyl tRNA synthetase N terminal domain VAA049_RS04090 PF05746 DALR anticodon binding domain VAA049_RS04090 PF00750 tRNA synthetases class I (R) VAA049_RS04100 PF05193 Peptidase M16 inactive domain VAA049_RS04100 PF00675 Insulinase (Peptidase family M16) VAA049_RS04105 PF00300 Histidine phosphatase superfamily (branch 1) VAA049_RS04110 PF00771 FHIPEP family VAA049_RS04115 PF00448 SRP54-type protein, GTPase domain VAA049_RS04120 PF10609 NUBPL iron-transfer P-loop NTPase VAA049_RS04125 PF04542 Sigma-70 region 2 VAA049_RS04125 PF04539 Sigma-70 region 3 VAA049_RS04125 PF04545 Sigma-70, region 4 VAA049_RS04130 PF00072 Response regulator receiver domain VAA049_RS04135 PF04344 Chemotaxis phosphatase, CheZ VAA049_RS04140 PF00072 Response regulator receiver domain VAA049_RS04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS04140 PF01627 Hpt domain VAA049_RS04140 PF02895 Signal transducing histidine kinase, homodimeric domain VAA049_RS04140 PF01584 CheW-like domain VAA049_RS04145 PF00072 Response regulator receiver domain VAA049_RS04145 PF01339 CheB methylesterase VAA049_RS04150 PF13614 AAA domain VAA049_RS04160 PF01584 CheW-like domain VAA049_RS04170 PF00005 ABC transporter VAA049_RS04175 PF03379 CcmB protein VAA049_RS04180 PF01578 Cytochrome C assembly protein VAA049_RS04185 PF04995 Heme exporter protein D (CcmD) VAA049_RS04190 PF03100 CcmE VAA049_RS04195 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VAA049_RS04195 PF01578 Cytochrome C assembly protein VAA049_RS04200 PF08534 Redoxin VAA049_RS04205 PF03918 Cytochrome C biogenesis protein VAA049_RS04215 PF04333 MlaA lipoprotein VAA049_RS04230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VAA049_RS04230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VAA049_RS04235 PF00462 Glutaredoxin VAA049_RS04240 PF01131 DNA topoisomerase VAA049_RS04240 PF01751 Toprim domain VAA049_RS04245 PF00850 Histone deacetylase domain VAA049_RS04260 PF00884 Sulfatase VAA049_RS04260 PF11893 Domain of unknown function (DUF3413) VAA049_RS04265 PF07208 Protein of unknown function (DUF1414) VAA049_RS04270 PF04245 37-kD nucleoid-associated bacterial protein VAA049_RS04280 PF03553 Na+/H+ antiporter family VAA049_RS04285 PF01118 Semialdehyde dehydrogenase, NAD binding domain VAA049_RS04285 PF02774 Semialdehyde dehydrogenase, dimerisation domain VAA049_RS04290 PF01914 MarC family integral membrane protein VAA049_RS04295 PF00465 Iron-containing alcohol dehydrogenase VAA049_RS04295 PF00171 Aldehyde dehydrogenase family VAA049_RS04305 PF00916 Sulfate permease family VAA049_RS04305 PF01740 STAS domain VAA049_RS04310 PF00575 S1 RNA binding domain VAA049_RS04310 PF10150 Ribonuclease E/G family VAA049_RS04310 PF12111 Polyribonucleotide phosphorylase C terminal VAA049_RS04325 PF01479 S4 domain VAA049_RS04325 PF00849 RNA pseudouridylate synthase VAA049_RS04330 PF02545 Maf-like protein VAA049_RS04335 PF02620 Large ribosomal RNA subunit accumulation protein YceD VAA049_RS04340 PF01783 Ribosomal L32p protein family VAA049_RS04345 PF02504 Fatty acid synthesis protein VAA049_RS04350 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VAA049_RS04350 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VAA049_RS04355 PF00698 Acyl transferase domain VAA049_RS04365 PF00550 Phosphopantetheine attachment site VAA049_RS04370 PF02801 Beta-ketoacyl synthase, C-terminal domain VAA049_RS04370 PF00109 Beta-ketoacyl synthase, N-terminal domain VAA049_RS04375 PF01063 Amino-transferase class IV VAA049_RS04380 PF02618 YceG-like family VAA049_RS04385 PF02223 Thymidylate kinase VAA049_RS04390 PF09115 DNA polymerase III, delta subunit, C terminal VAA049_RS04395 PF01026 TatD related DNase VAA049_RS04400 PF00367 phosphotransferase system, EIIB VAA049_RS04400 PF02378 Phosphotransferase system, EIIC VAA049_RS04405 PF00209 Sodium:neurotransmitter symporter family VAA049_RS04420 PF01734 Patatin-like phospholipase VAA049_RS04425 PF00224 Pyruvate kinase, barrel domain VAA049_RS04425 PF02887 Pyruvate kinase, alpha/beta domain VAA049_RS04430 PF00480 ROK family VAA049_RS04435 PF01584 CheW-like domain VAA049_RS04435 PF00072 Response regulator receiver domain VAA049_RS04450 PF13847 Methyltransferase domain VAA049_RS04460 PF01263 Aldose 1-epimerase VAA049_RS04465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAA049_RS04465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAA049_RS04470 PF01641 SelR domain VAA049_RS04480 PF07023 Protein of unknown function (DUF1315) VAA049_RS04485 PF00710 Asparaginase, N-terminal VAA049_RS04485 PF17763 Glutaminase/Asparaginase C-terminal domain VAA049_RS04490 PF01343 Peptidase family S49 VAA049_RS04495 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS04495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAA049_RS04500 PF01842 ACT domain VAA049_RS04500 PF00551 Formyl transferase VAA049_RS04510 PF04851 Type III restriction enzyme, res subunit VAA049_RS04510 PF13307 Helicase C-terminal domain VAA049_RS04515 PF00814 Glycoprotease family VAA049_RS04530 PF00561 alpha/beta hydrolase fold VAA049_RS04540 PF01612 3'-5' exonuclease VAA049_RS04540 PF00570 HRDC domain VAA049_RS04560 PF01966 HD domain VAA049_RS04560 PF13286 Phosphohydrolase-associated domain VAA049_RS04570 PF00155 Aminotransferase class I and II VAA049_RS04575 PF00425 chorismate binding enzyme VAA049_RS04580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAA049_RS04580 PF16582 Middle domain of thiamine pyrophosphate VAA049_RS04580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA049_RS04585 PF12697 Alpha/beta hydrolase family VAA049_RS04590 PF00378 Enoyl-CoA hydratase/isomerase VAA049_RS04595 PF13378 Enolase C-terminal domain-like VAA049_RS04600 PF13193 AMP-binding enzyme C-terminal domain VAA049_RS04600 PF00501 AMP-binding enzyme VAA049_RS04605 PF03594 Benzoate membrane transport protein VAA049_RS04610 PF01381 Helix-turn-helix VAA049_RS04610 PF07883 Cupin domain VAA049_RS04615 PF00672 HAMP domain VAA049_RS04615 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS04615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS04625 PF07690 Major Facilitator Superfamily VAA049_RS04645 PF04170 NlpE N-terminal domain VAA049_RS04650 PF03776 Septum formation topological specificity factor MinE VAA049_RS04655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VAA049_RS04660 PF05209 Septum formation inhibitor MinC, N-terminal domain VAA049_RS04660 PF03775 Septum formation inhibitor MinC, C-terminal domain VAA049_RS04665 PF05166 YcgL domain VAA049_RS04670 PF13406 Transglycosylase SLT domain VAA049_RS04675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS04675 PF03466 LysR substrate binding domain VAA049_RS04680 PF07670 Nucleoside recognition VAA049_RS04680 PF07662 Na+ dependent nucleoside transporter C-terminus VAA049_RS04680 PF01773 Na+ dependent nucleoside transporter N-terminus VAA049_RS04685 PF06483 Chitinase C VAA049_RS04685 PF00704 Glycosyl hydrolases family 18 VAA049_RS04690 PF03264 NapC/NirT cytochrome c family, N-terminal region VAA049_RS04695 PF01568 Molydopterin dinucleotide binding domain VAA049_RS04695 PF00384 Molybdopterin oxidoreductase VAA049_RS04695 PF18364 Molybdopterin oxidoreductase N-terminal domain VAA049_RS04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS04705 PF03466 LysR substrate binding domain VAA049_RS04710 PF01494 FAD binding domain VAA049_RS04715 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VAA049_RS04720 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VAA049_RS04720 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VAA049_RS04765 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS04765 PF00563 EAL domain VAA049_RS04765 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS04780 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VAA049_RS04785 PF03480 Bacterial extracellular solute-binding protein, family 7 VAA049_RS04790 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VAA049_RS04795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAA049_RS04800 PF02954 Bacterial regulatory protein, Fis family VAA049_RS04800 PF00158 Sigma-54 interaction domain VAA049_RS04800 PF00072 Response regulator receiver domain VAA049_RS04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS04805 PF02743 Cache domain VAA049_RS04805 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS04815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA049_RS04815 PF05698 Bacterial trigger factor protein (TF) C-terminus VAA049_RS04815 PF05697 Bacterial trigger factor protein (TF) VAA049_RS04820 PF00574 Clp protease VAA049_RS04825 PF10431 C-terminal, D2-small domain, of ClpB protein VAA049_RS04825 PF07724 AAA domain (Cdc48 subfamily) VAA049_RS04825 PF06689 ClpX C4-type zinc finger VAA049_RS04830 PF00004 ATPase family associated with various cellular activities (AAA) VAA049_RS04830 PF02190 ATP-dependent protease La (LON) substrate-binding domain VAA049_RS04830 PF05362 Lon protease (S16) C-terminal proteolytic domain VAA049_RS04835 PF00216 Bacterial DNA-binding protein VAA049_RS04840 PF13145 PPIC-type PPIASE domain VAA049_RS04850 PF02224 Cytidylate kinase VAA049_RS04855 PF00575 S1 RNA binding domain VAA049_RS04860 PF00216 Bacterial DNA-binding protein VAA049_RS04865 PF06305 Lipopolysaccharide assembly protein A domain VAA049_RS04870 PF18073 Rubredoxin metal binding domain VAA049_RS04875 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VAA049_RS04880 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VAA049_RS04890 PF03466 LysR substrate binding domain VAA049_RS04890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS04900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VAA049_RS04900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VAA049_RS04905 PF01037 Lrp/AsnC ligand binding domain VAA049_RS04910 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VAA049_RS04910 PF17854 FtsK alpha domain VAA049_RS04910 PF01580 FtsK/SpoIIIE family VAA049_RS04910 PF09397 Ftsk gamma domain VAA049_RS04915 PF02600 Disulfide bond formation protein DsbB VAA049_RS04920 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VAA049_RS04925 PF00392 Bacterial regulatory proteins, gntR family VAA049_RS04925 PF07840 FadR C-terminal domain VAA049_RS04935 PF00672 HAMP domain VAA049_RS04935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS04940 PF01230 HIT domain VAA049_RS04955 PF13036 Peptidoglycan-synthase activator LpoB VAA049_RS04955 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VAA049_RS04965 PF05728 Uncharacterised protein family (UPF0227) VAA049_RS04970 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS04980 PF07968 Leukocidin/Hemolysin toxin family VAA049_RS04980 PF12563 Hemolytic toxin N terminal VAA049_RS04980 PF16458 Beta-prism lectin VAA049_RS04990 PF02559 CarD-like/TRCF domain VAA049_RS04990 PF00270 DEAD/DEAH box helicase VAA049_RS04990 PF17757 UvrB interaction domain VAA049_RS04990 PF03461 TRCF domain VAA049_RS04990 PF00271 Helicase conserved C-terminal domain VAA049_RS05000 PF12704 MacB-like periplasmic core domain VAA049_RS05000 PF02687 FtsX-like permease family VAA049_RS05005 PF00005 ABC transporter VAA049_RS05010 PF12704 MacB-like periplasmic core domain VAA049_RS05010 PF02687 FtsX-like permease family VAA049_RS05020 PF13567 Domain of unknown function (DUF4131) VAA049_RS05020 PF03772 Competence protein VAA049_RS05020 PF00753 Metallo-beta-lactamase superfamily VAA049_RS05025 PF00005 ABC transporter VAA049_RS05025 PF00664 ABC transporter transmembrane region VAA049_RS05030 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VAA049_RS05035 PF03966 Trm112p-like protein VAA049_RS05040 PF02348 Cytidylyltransferase VAA049_RS05045 PF04293 SpoVR like protein VAA049_RS05050 PF04285 Protein of unknown function (DUF444) VAA049_RS05055 PF08298 PrkA AAA domain VAA049_RS05055 PF06798 PrkA serine protein kinase C-terminal domain VAA049_RS05060 PF03887 YfbU domain VAA049_RS05070 PF04055 Radical SAM superfamily VAA049_RS05075 PF00672 HAMP domain VAA049_RS05075 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS05075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS05085 PF01228 Glycine radical VAA049_RS05085 PF02901 Pyruvate formate lyase-like VAA049_RS05095 PF00005 ABC transporter VAA049_RS05100 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA049_RS05105 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS05110 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS05115 PF03372 Endonuclease/Exonuclease/phosphatase family VAA049_RS05120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS05120 PF00672 HAMP domain VAA049_RS05125 PF10689 Protein of unknown function (DUF2496) VAA049_RS05130 PF07445 Primosomal replication protein priC VAA049_RS05135 PF01925 Sulfite exporter TauE/SafE VAA049_RS05140 PF13307 Helicase C-terminal domain VAA049_RS05140 PF06733 DEAD_2 VAA049_RS05145 PF13609 Gram-negative porin VAA049_RS05150 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VAA049_RS05160 PF02810 SEC-C motif VAA049_RS05165 PF08668 HDOD domain VAA049_RS05165 PF00563 EAL domain VAA049_RS05170 PF00149 Calcineurin-like phosphoesterase VAA049_RS05175 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VAA049_RS05180 PF01406 tRNA synthetases class I (C) catalytic domain VAA049_RS05180 PF09190 DALR domain VAA049_RS05185 PF02075 Crossover junction endodeoxyribonuclease RuvC VAA049_RS05190 PF01330 RuvA N terminal domain VAA049_RS05190 PF07499 RuvA, C-terminal domain VAA049_RS05195 PF17864 RuvB AAA lid domain VAA049_RS05195 PF05491 RuvB C-terminal winged helix domain VAA049_RS05195 PF05496 Holliday junction DNA helicase RuvB P-loop domain VAA049_RS05200 PF01654 Cytochrome bd terminal oxidase subunit I VAA049_RS05205 PF02322 Cytochrome bd terminal oxidase subunit II VAA049_RS05210 PF08173 Membrane bound YbgT-like protein VAA049_RS05215 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) VAA049_RS05220 PF03061 Thioesterase superfamily VAA049_RS05225 PF01618 MotA/TolQ/ExbB proton channel family VAA049_RS05230 PF02472 Biopolymer transport protein ExbD/TolR VAA049_RS05240 PF07676 WD40-like Beta Propeller Repeat VAA049_RS05240 PF04052 TolB amino-terminal domain VAA049_RS05245 PF00691 OmpA family VAA049_RS05255 PF02445 Quinolinate synthetase A protein VAA049_RS05265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS05265 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS05265 PF09308 LuxQ, periplasmic VAA049_RS05265 PF00072 Response regulator receiver domain VAA049_RS05270 PF06610 L-alanine exporter VAA049_RS05275 PF01238 Phosphomannose isomerase type I VAA049_RS05280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAA049_RS05280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAA049_RS05280 PF02378 Phosphotransferase system, EIIC VAA049_RS05285 PF12833 Helix-turn-helix domain VAA049_RS05295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAA049_RS05310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAA049_RS05310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAA049_RS05315 PF00171 Aldehyde dehydrogenase family VAA049_RS05320 PF01590 GAF domain VAA049_RS05320 PF02954 Bacterial regulatory protein, Fis family VAA049_RS05320 PF00158 Sigma-54 interaction domain VAA049_RS05325 PF09905 DNA-binding protein VF530 VAA049_RS05335 PF03441 FAD binding domain of DNA photolyase VAA049_RS05335 PF00875 DNA photolyase VAA049_RS05360 PF00873 AcrB/AcrD/AcrF family VAA049_RS05365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAA049_RS05375 PF02470 MlaD protein VAA049_RS05380 PF04403 Paraquat-inducible protein A VAA049_RS05390 PF08362 YcdC-like protein, C-terminal region VAA049_RS05390 PF00440 Bacterial regulatory proteins, tetR family VAA049_RS05395 PF00171 Aldehyde dehydrogenase family VAA049_RS05400 PF07383 Protein of unknown function (DUF1496) VAA049_RS05410 PF16295 Tetracyclin repressor-like, C-terminal domain VAA049_RS05410 PF00440 Bacterial regulatory proteins, tetR family VAA049_RS05415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VAA049_RS05415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VAA049_RS05415 PF02770 Acyl-CoA dehydrogenase, middle domain VAA049_RS05415 PF09317 Domain of unknown function (DUF1974) VAA049_RS05420 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VAA049_RS05420 PF12241 Trans-2-enoyl-CoA reductase catalytic region VAA049_RS05420 PF07055 Enoyl reductase FAD binding domain VAA049_RS05425 PF01176 Translation initiation factor 1A / IF-1 VAA049_RS05430 PF04376 Arginine-tRNA-protein transferase, N terminus VAA049_RS05430 PF04377 Arginine-tRNA-protein transferase, C terminus VAA049_RS05435 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VAA049_RS05445 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VAA049_RS05450 PF10692 Protein of unknown function (DUF2498) VAA049_RS05455 PF01131 DNA topoisomerase VAA049_RS05455 PF01396 Topoisomerase DNA binding C4 zinc finger VAA049_RS05455 PF01751 Toprim domain VAA049_RS05455 PF08272 Topoisomerase I zinc-ribbon-like VAA049_RS05460 PF00483 Nucleotidyl transferase VAA049_RS05465 PF00534 Glycosyl transferases group 1 VAA049_RS05465 PF08323 Starch synthase catalytic domain VAA049_RS05485 PF04994 TfoX C-terminal domain VAA049_RS05485 PF04993 TfoX N-terminal domain VAA049_RS05490 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS05495 PF02613 Nitrate reductase delta subunit VAA049_RS05500 PF00072 Response regulator receiver domain VAA049_RS05500 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS05505 PF02698 DUF218 domain VAA049_RS05510 PF13847 Methyltransferase domain VAA049_RS05515 PF17192 MukF middle domain VAA049_RS05515 PF03882 MukF winged-helix domain VAA049_RS05515 PF17193 MukF C-terminal domain VAA049_RS05520 PF04288 MukE-like family VAA049_RS05525 PF04310 MukB N-terminal VAA049_RS05525 PF16330 MukB hinge domain VAA049_RS05530 PF01037 Lrp/AsnC ligand binding domain VAA049_RS05535 PF01810 LysE type translocator VAA049_RS05540 PF08497 Radical SAM N-terminal VAA049_RS05540 PF11842 Domain of unknown function (DUF3362) VAA049_RS05540 PF04055 Radical SAM superfamily VAA049_RS05545 PF08448 PAS fold VAA049_RS05545 PF00563 EAL domain VAA049_RS05545 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS05545 PF08447 PAS fold VAA049_RS05550 PF05193 Peptidase M16 inactive domain VAA049_RS05550 PF00675 Insulinase (Peptidase family M16) VAA049_RS05565 PF03466 LysR substrate binding domain VAA049_RS05565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS05570 PF08267 Cobalamin-independent synthase, N-terminal domain VAA049_RS05570 PF01717 Cobalamin-independent synthase, Catalytic domain VAA049_RS05580 PF03795 YCII-related domain VAA049_RS05585 PF03061 Thioesterase superfamily VAA049_RS05590 PF04279 Intracellular septation protein A VAA049_RS05600 PF02698 DUF218 domain VAA049_RS05605 PF01370 NAD dependent epimerase/dehydratase family VAA049_RS05615 PF01226 Formate/nitrite transporter VAA049_RS05625 PF06796 Periplasmic nitrate reductase protein NapE VAA049_RS05630 PF03264 NapC/NirT cytochrome c family, N-terminal region VAA049_RS05635 PF18364 Molybdopterin oxidoreductase N-terminal domain VAA049_RS05635 PF00384 Molybdopterin oxidoreductase VAA049_RS05635 PF01568 Molydopterin dinucleotide binding domain VAA049_RS05650 PF02833 DHHA2 domain VAA049_RS05650 PF01368 DHH family VAA049_RS05665 PF00005 ABC transporter VAA049_RS05670 PF00005 ABC transporter VAA049_RS05670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA049_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS05675 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA049_RS05680 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS05685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA049_RS05690 PF00158 Sigma-54 interaction domain VAA049_RS05690 PF02954 Bacterial regulatory protein, Fis family VAA049_RS05695 PF04012 PspA/IM30 family VAA049_RS05710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAA049_RS05710 PF00529 HlyD membrane-fusion protein of T1SS VAA049_RS05715 PF13533 Biotin-lipoyl like VAA049_RS05720 PF00873 AcrB/AcrD/AcrF family VAA049_RS05725 PF03352 Methyladenine glycosylase VAA049_RS05730 PF01053 Cys/Met metabolism PLP-dependent enzyme VAA049_RS05735 PF13396 Phospholipase_D-nuclease N-terminal VAA049_RS05735 PF13091 PLD-like domain VAA049_RS05740 PF00209 Sodium:neurotransmitter symporter family VAA049_RS05745 PF00849 RNA pseudouridylate synthase VAA049_RS05750 PF01066 CDP-alcohol phosphatidyltransferase VAA049_RS05755 PF00005 ABC transporter VAA049_RS05760 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS05765 PF13416 Bacterial extracellular solute-binding protein VAA049_RS05775 PF06945 Protein of unknown function (DUF1289) VAA049_RS05790 PF00005 ABC transporter VAA049_RS05795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAA049_RS05800 PF03222 Tryptophan/tyrosine permease family VAA049_RS05810 PF00571 CBS domain VAA049_RS05810 PF01769 Divalent cation transporter VAA049_RS05810 PF03448 MgtE intracellular N domain VAA049_RS05815 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS05815 PF00072 Response regulator receiver domain VAA049_RS05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS05815 PF09308 LuxQ, periplasmic VAA049_RS05820 PF00563 EAL domain VAA049_RS05820 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS05820 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS05830 PF01752 Collagenase VAA049_RS05830 PF08453 Peptidase family M9 N-terminal VAA049_RS05830 PF04151 Bacterial pre-peptidase C-terminal domain VAA049_RS05840 PF12793 Sugar transport-related sRNA regulator N-term VAA049_RS05840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA049_RS05845 PF13737 Transposase DDE domain VAA049_RS05865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS05865 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS05865 PF00672 HAMP domain VAA049_RS05880 PF00563 EAL domain VAA049_RS05880 PF01590 GAF domain VAA049_RS05880 PF00360 Phytochrome region VAA049_RS05880 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS05885 PF01386 Ribosomal L25p family VAA049_RS05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS05895 PF00072 Response regulator receiver domain VAA049_RS05895 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS05905 PF00271 Helicase conserved C-terminal domain VAA049_RS05905 PF04851 Type III restriction enzyme, res subunit VAA049_RS05910 PF01479 S4 domain VAA049_RS05910 PF00849 RNA pseudouridylate synthase VAA049_RS05915 PF07690 Major Facilitator Superfamily VAA049_RS05925 PF11066 Protein of unknown function (DUF2867) VAA049_RS05925 PF13460 NAD(P)H-binding VAA049_RS05930 PF01554 MatE VAA049_RS05935 PF00005 ABC transporter VAA049_RS05940 PF12704 MacB-like periplasmic core domain VAA049_RS05940 PF02687 FtsX-like permease family VAA049_RS05950 PF06965 Na+/H+ antiporter 1 VAA049_RS05955 PF00202 Aminotransferase class-III VAA049_RS05960 PF16653 Saccharopine dehydrogenase C-terminal domain VAA049_RS05960 PF03435 Saccharopine dehydrogenase NADP binding domain VAA049_RS05970 PF00691 OmpA family VAA049_RS05970 PF05736 OprF membrane domain VAA049_RS05975 PF02321 Outer membrane efflux protein VAA049_RS06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS06005 PF03466 LysR substrate binding domain VAA049_RS06015 PF01863 Protein of unknown function DUF45 VAA049_RS06020 PF05971 RNA methyltransferase VAA049_RS06035 PF04204 Homoserine O-succinyltransferase VAA049_RS06055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAA049_RS06070 PF00989 PAS fold VAA049_RS06070 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VAA049_RS06070 PF17203 Single cache domain 3 VAA049_RS06070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS06075 PF00072 Response regulator receiver domain VAA049_RS06075 PF12431 Transcriptional regulator VAA049_RS06085 PF01584 CheW-like domain VAA049_RS06085 PF00072 Response regulator receiver domain VAA049_RS06100 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS06100 PF00072 Response regulator receiver domain VAA049_RS06120 PF07690 Major Facilitator Superfamily VAA049_RS06125 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VAA049_RS06125 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VAA049_RS06130 PF00288 GHMP kinases N terminal domain VAA049_RS06130 PF08544 GHMP kinases C terminal VAA049_RS06130 PF10509 Galactokinase galactose-binding signature VAA049_RS06135 PF01263 Aldose 1-epimerase VAA049_RS06140 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS06145 PF00563 EAL domain VAA049_RS06145 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS06145 PF00672 HAMP domain VAA049_RS06145 PF17154 Gammaproteobacterial periplasmic sensor domain VAA049_RS06155 PF00205 Thiamine pyrophosphate enzyme, central domain VAA049_RS06155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA049_RS06155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VAA049_RS06160 PF03306 Alpha-acetolactate decarboxylase VAA049_RS06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS06165 PF03466 LysR substrate binding domain VAA049_RS06170 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) VAA049_RS06175 PF00361 Proton-conducting membrane transporter VAA049_RS06175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VAA049_RS06180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS06180 PF03466 LysR substrate binding domain VAA049_RS06185 PF13193 AMP-binding enzyme C-terminal domain VAA049_RS06185 PF00501 AMP-binding enzyme VAA049_RS06200 PF04266 ASCH domain VAA049_RS06215 PF00206 Lyase VAA049_RS06215 PF10415 Fumarase C C-terminus VAA049_RS06225 PF01654 Cytochrome bd terminal oxidase subunit I VAA049_RS06230 PF02322 Cytochrome bd terminal oxidase subunit II VAA049_RS06235 PF02687 FtsX-like permease family VAA049_RS06235 PF12704 MacB-like periplasmic core domain VAA049_RS06235 PF00005 ABC transporter VAA049_RS06240 PF12704 MacB-like periplasmic core domain VAA049_RS06240 PF00005 ABC transporter VAA049_RS06240 PF02687 FtsX-like permease family VAA049_RS06245 PF02687 FtsX-like permease family VAA049_RS06245 PF00005 ABC transporter VAA049_RS06245 PF12704 MacB-like periplasmic core domain VAA049_RS06255 PF00529 HlyD membrane-fusion protein of T1SS VAA049_RS06265 PF03466 LysR substrate binding domain VAA049_RS06265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS06270 PF00141 Peroxidase VAA049_RS06275 PF00232 Glycosyl hydrolase family 1 VAA049_RS06280 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS06285 PF01042 Endoribonuclease L-PSP VAA049_RS06290 PF04074 YhcH/YjgK/YiaL VAA049_RS06295 PF03009 Glycerophosphoryl diester phosphodiesterase family VAA049_RS06300 PF08220 DeoR-like helix-turn-helix domain VAA049_RS06300 PF00455 DeoR C terminal sensor domain VAA049_RS06305 PF17912 MalK OB fold domain VAA049_RS06305 PF00005 ABC transporter VAA049_RS06310 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS06315 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS06320 PF13416 Bacterial extracellular solute-binding protein VAA049_RS06330 PF01618 MotA/TolQ/ExbB proton channel family VAA049_RS06335 PF01618 MotA/TolQ/ExbB proton channel family VAA049_RS06340 PF02472 Biopolymer transport protein ExbD/TolR VAA049_RS06345 PF03544 Gram-negative bacterial TonB protein C-terminal VAA049_RS06355 PF01068 ATP dependent DNA ligase domain VAA049_RS06355 PF14743 DNA ligase OB-like domain VAA049_RS06365 PF01554 MatE VAA049_RS06375 PF03881 Fructosamine kinase VAA049_RS06385 PF00877 NlpC/P60 family VAA049_RS06390 PF00672 HAMP domain VAA049_RS06390 PF17202 Single cache domain 3 VAA049_RS06390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS06400 PF03942 DTW domain VAA049_RS06405 PF00480 ROK family VAA049_RS06430 PF00994 Probable molybdopterin binding domain VAA049_RS06430 PF03454 MoeA C-terminal region (domain IV) VAA049_RS06430 PF03453 MoeA N-terminal region (domain I and II) VAA049_RS06435 PF12804 MobA-like NTP transferase domain VAA049_RS06440 PF00005 ABC transporter VAA049_RS06440 PF08402 TOBE domain VAA049_RS06445 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS06450 PF12849 PBP superfamily domain VAA049_RS06455 PF02954 Bacterial regulatory protein, Fis family VAA049_RS06455 PF00158 Sigma-54 interaction domain VAA049_RS06455 PF00072 Response regulator receiver domain VAA049_RS06460 PF00989 PAS fold VAA049_RS06460 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS06460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS06465 PF00005 ABC transporter VAA049_RS06465 PF12848 ABC transporter VAA049_RS06470 PF02634 FdhD/NarQ family VAA049_RS06490 PF02613 Nitrate reductase delta subunit VAA049_RS06500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAA049_RS06500 PF00384 Molybdopterin oxidoreductase VAA049_RS06500 PF01568 Molydopterin dinucleotide binding domain VAA049_RS06505 PF13247 4Fe-4S dicluster domain VAA049_RS06520 PF02146 Sir2 family VAA049_RS06525 PF04461 Protein of unknown function (DUF520) VAA049_RS06530 PF00793 DAHP synthetase I family VAA049_RS06545 PF17783 CvfB-like winged helix domain VAA049_RS06545 PF13509 S1 domain VAA049_RS06550 PF01189 16S rRNA methyltransferase RsmB/F VAA049_RS06550 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VAA049_RS06550 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VAA049_RS06555 PF02470 MlaD protein VAA049_RS06560 PF04403 Paraquat-inducible protein A VAA049_RS06565 PF00005 ABC transporter VAA049_RS06565 PF00664 ABC transporter transmembrane region VAA049_RS06570 PF13185 GAF domain VAA049_RS06575 PF04352 ProQ/FINO family VAA049_RS06575 PF17516 ProQ C-terminal domain VAA049_RS06580 PF11818 C-terminal domain of tail specific protease (DUF3340) VAA049_RS06580 PF17804 Tail specific protease N-terminal domain VAA049_RS06580 PF03572 Peptidase family S41 VAA049_RS06580 PF00595 PDZ domain VAA049_RS06590 PF01433 Peptidase family M1 domain VAA049_RS06590 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VAA049_RS06590 PF11940 Domain of unknown function (DUF3458) Ig-like fold VAA049_RS06600 PF05088 Bacterial NAD-glutamate dehydrogenase VAA049_RS06605 PF01180 Dihydroorotate dehydrogenase VAA049_RS06610 PF07126 Cell-division protein ZapC VAA049_RS06615 PF10672 S-adenosylmethionine-dependent methyltransferase VAA049_RS06615 PF02926 THUMP domain VAA049_RS06615 PF01170 Putative RNA methylase family UPF0020 VAA049_RS06625 PF00005 ABC transporter VAA049_RS06625 PF16326 ABC transporter C-terminal domain VAA049_RS06625 PF12848 ABC transporter VAA049_RS06635 PF04957 Ribosome modulation factor VAA049_RS06640 PF07977 FabA-like domain VAA049_RS06645 PF13654 AAA domain VAA049_RS06645 PF05362 Lon protease (S16) C-terminal proteolytic domain VAA049_RS06650 PF06303 MatP N-terminal domain VAA049_RS06650 PF17414 MatP C-terminal ribbon-helix-helix domain VAA049_RS06845 PF16671 Actin cross-linking domain VAA049_RS06845 PF12146 Serine aminopeptidase, S33 VAA049_RS06845 PF11647 Membrane Localization Domain VAA049_RS06845 PF11713 Peptidase C80 family VAA049_RS06845 PF07634 RtxA repeat VAA049_RS06850 PF02794 RTX toxin acyltransferase family VAA049_RS06860 PF00005 ABC transporter VAA049_RS06860 PF00664 ABC transporter transmembrane region VAA049_RS06860 PF03412 Peptidase C39 family VAA049_RS06870 PF00005 ABC transporter VAA049_RS06870 PF03412 Peptidase C39 family VAA049_RS06870 PF00664 ABC transporter transmembrane region VAA049_RS06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS06875 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS06875 PF09308 LuxQ, periplasmic VAA049_RS06875 PF00072 Response regulator receiver domain VAA049_RS06890 PF00115 Cytochrome C and Quinol oxidase polypeptide I VAA049_RS06905 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VAA049_RS06905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAA049_RS06915 PF00403 Heavy-metal-associated domain VAA049_RS06930 PF13545 Crp-like helix-turn-helix domain VAA049_RS06930 PF00027 Cyclic nucleotide-binding domain VAA049_RS06935 PF00582 Universal stress protein family VAA049_RS06940 PF01171 PP-loop family VAA049_RS06960 PF00005 ABC transporter VAA049_RS06960 PF08402 TOBE domain VAA049_RS06965 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS06970 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS06975 PF13416 Bacterial extracellular solute-binding protein VAA049_RS06980 PF13416 Bacterial extracellular solute-binding protein VAA049_RS06995 PF01235 Sodium:alanine symporter family VAA049_RS07000 PF01810 LysE type translocator VAA049_RS07020 PF04717 Type VI secretion system, phage-baseplate injector VAA049_RS07020 PF16671 Actin cross-linking domain VAA049_RS07025 PF05638 Type VI secretion system effector, Hcp VAA049_RS07030 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VAA049_RS07035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS07035 PF02743 Cache domain VAA049_RS07035 PF00672 HAMP domain VAA049_RS07040 PF07690 Major Facilitator Superfamily VAA049_RS07045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAA049_RS07045 PF00529 HlyD membrane-fusion protein of T1SS VAA049_RS07050 PF02321 Outer membrane efflux protein VAA049_RS07060 PF00271 Helicase conserved C-terminal domain VAA049_RS07060 PF00270 DEAD/DEAH box helicase VAA049_RS07065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS07065 PF08447 PAS fold VAA049_RS07065 PF13426 PAS domain VAA049_RS07070 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS07070 PF00672 HAMP domain VAA049_RS07070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS07075 PF00672 HAMP domain VAA049_RS07075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS07075 PF17202 Single cache domain 3 VAA049_RS07080 PF01584 CheW-like domain VAA049_RS07085 PF00072 Response regulator receiver domain VAA049_RS07085 PF01339 CheB methylesterase VAA049_RS07095 PF03705 CheR methyltransferase, all-alpha domain VAA049_RS07095 PF01739 CheR methyltransferase, SAM binding domain VAA049_RS07100 PF01584 CheW-like domain VAA049_RS07100 PF02895 Signal transducing histidine kinase, homodimeric domain VAA049_RS07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS07100 PF01627 Hpt domain VAA049_RS07100 PF00072 Response regulator receiver domain VAA049_RS07105 PF02895 Signal transducing histidine kinase, homodimeric domain VAA049_RS07105 PF01584 CheW-like domain VAA049_RS07105 PF01627 Hpt domain VAA049_RS07105 PF07194 P2 response regulator binding domain VAA049_RS07105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS07115 PF00072 Response regulator receiver domain VAA049_RS07120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS07120 PF00672 HAMP domain VAA049_RS07125 PF00893 Small Multidrug Resistance protein VAA049_RS07130 PF03441 FAD binding domain of DNA photolyase VAA049_RS07130 PF00875 DNA photolyase VAA049_RS07135 PF07690 Major Facilitator Superfamily VAA049_RS07140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS07140 PF03466 LysR substrate binding domain VAA049_RS07150 PF03099 Biotin/lipoate A/B protein ligase family VAA049_RS07150 PF10437 Bacterial lipoate protein ligase C-terminus VAA049_RS07155 PF00012 Hsp70 protein VAA049_RS07165 PF00270 DEAD/DEAH box helicase VAA049_RS07165 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VAA049_RS07165 PF00271 Helicase conserved C-terminal domain VAA049_RS07165 PF11898 Domain of unknown function (DUF3418) VAA049_RS07165 PF04408 Helicase associated domain (HA2) VAA049_RS07195 PF00563 EAL domain VAA049_RS07195 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS07195 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS07205 PF00012 Hsp70 protein VAA049_RS07210 PF00012 Hsp70 protein VAA049_RS07215 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS07215 PF17158 Membrane-associated sensor, integral membrane domain VAA049_RS07225 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS07225 PF00563 EAL domain VAA049_RS07225 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS07245 PF06508 Queuosine biosynthesis protein QueC VAA049_RS07250 PF04055 Radical SAM superfamily VAA049_RS07260 PF10414 Sirohaem synthase dimerisation region VAA049_RS07260 PF14824 Sirohaem biosynthesis protein central VAA049_RS07260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAA049_RS07265 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA049_RS07270 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS07275 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS07280 PF00005 ABC transporter VAA049_RS07285 PF01027 Inhibitor of apoptosis-promoting Bax1 VAA049_RS07290 PF04358 DsrC like protein VAA049_RS07295 PF00708 Acylphosphatase VAA049_RS07300 PF17785 PUA-like domain VAA049_RS07300 PF10672 S-adenosylmethionine-dependent methyltransferase VAA049_RS07305 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS07315 PF08534 Redoxin VAA049_RS07315 PF00462 Glutaredoxin VAA049_RS07320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS07320 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS07320 PF00672 HAMP domain VAA049_RS07320 PF01627 Hpt domain VAA049_RS07320 PF00072 Response regulator receiver domain VAA049_RS07320 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VAA049_RS07325 PF00072 Response regulator receiver domain VAA049_RS07330 PF02798 Glutathione S-transferase, N-terminal domain VAA049_RS07330 PF14497 Glutathione S-transferase, C-terminal domain VAA049_RS07340 PF04209 homogentisate 1,2-dioxygenase VAA049_RS07345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAA049_RS07350 PF07687 Peptidase dimerisation domain VAA049_RS07350 PF01546 Peptidase family M20/M25/M40 VAA049_RS07365 PF13193 AMP-binding enzyme C-terminal domain VAA049_RS07365 PF00501 AMP-binding enzyme VAA049_RS07365 PF16177 Acetyl-coenzyme A synthetase N-terminus VAA049_RS07370 PF04303 PrpF protein VAA049_RS07375 PF00330 Aconitase family (aconitate hydratase) VAA049_RS07375 PF00694 Aconitase C-terminal domain VAA049_RS07380 PF00285 Citrate synthase, C-terminal domain VAA049_RS07390 PF07729 FCD domain VAA049_RS07390 PF00392 Bacterial regulatory proteins, gntR family VAA049_RS07410 PF01970 Tripartite tricarboxylate transporter TctA family VAA049_RS07425 PF02653 Branched-chain amino acid transport system / permease component VAA049_RS07430 PF00005 ABC transporter VAA049_RS07440 PF13407 Periplasmic binding protein domain VAA049_RS07465 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS07465 PF00072 Response regulator receiver domain VAA049_RS07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS07470 PF00672 HAMP domain VAA049_RS07470 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS07475 PF06629 MltA-interacting protein MipA VAA049_RS07480 PF04393 Protein of unknown function (DUF535) VAA049_RS07485 PF00158 Sigma-54 interaction domain VAA049_RS07485 PF02954 Bacterial regulatory protein, Fis family VAA049_RS07485 PF00072 Response regulator receiver domain VAA049_RS07490 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA049_RS07490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS07490 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS07495 PF00939 Sodium:sulfate symporter transmembrane region VAA049_RS07500 PF00672 HAMP domain VAA049_RS07500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS07505 PF00842 Alanine racemase, C-terminal domain VAA049_RS07505 PF01168 Alanine racemase, N-terminal domain VAA049_RS07510 PF00892 EamA-like transporter family VAA049_RS07520 PF13302 Acetyltransferase (GNAT) domain VAA049_RS07525 PF00158 Sigma-54 interaction domain VAA049_RS07525 PF18024 Helix-turn-helix domain VAA049_RS07530 PF05128 Domain of unknown function (DUF697) VAA049_RS07535 PF04317 YcjX-like family, DUF463 VAA049_RS07550 PF04715 Anthranilate synthase component I, N terminal region VAA049_RS07550 PF00425 chorismate binding enzyme VAA049_RS07555 PF00293 NUDIX domain VAA049_RS07565 PF03315 Serine dehydratase beta chain VAA049_RS07565 PF03313 Serine dehydratase alpha chain VAA049_RS07570 PF01242 6-pyruvoyl tetrahydropterin synthase VAA049_RS07575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS07575 PF00672 HAMP domain VAA049_RS07580 PF00152 tRNA synthetases class II (D, K and N) VAA049_RS07580 PF01336 OB-fold nucleic acid binding domain VAA049_RS07585 PF08543 Phosphomethylpyrimidine kinase VAA049_RS07590 PF00672 HAMP domain VAA049_RS07590 PF01966 HD domain VAA049_RS07595 PF00155 Aminotransferase class I and II VAA049_RS07610 PF00672 HAMP domain VAA049_RS07610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS07610 PF17200 Single Cache domain 2 VAA049_RS07615 PF04349 Periplasmic glucan biosynthesis protein, MdoG VAA049_RS07620 PF13506 Glycosyl transferase family 21 VAA049_RS07625 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS07630 PF04794 YdjC-like protein VAA049_RS07635 PF11975 Family 4 glycosyl hydrolase C-terminal domain VAA049_RS07635 PF02056 Family 4 glycosyl hydrolase VAA049_RS07640 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VAA049_RS07645 PF02378 Phosphotransferase system, EIIC VAA049_RS07650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAA049_RS07655 PF01522 Polysaccharide deacetylase VAA049_RS07660 PF02028 BCCT, betaine/carnitine/choline family transporter VAA049_RS07665 PF01047 MarR family VAA049_RS07670 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS07670 PF00072 Response regulator receiver domain VAA049_RS07675 PF17200 Single Cache domain 2 VAA049_RS07675 PF07730 Histidine kinase VAA049_RS07680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VAA049_RS07690 PF03480 Bacterial extracellular solute-binding protein, family 7 VAA049_RS07705 PF00753 Metallo-beta-lactamase superfamily VAA049_RS07710 PF05951 Bacterial protein of unknown function (DUF882) VAA049_RS07740 PF00925 GTP cyclohydrolase II VAA049_RS07750 PF07690 Major Facilitator Superfamily VAA049_RS07760 PF17773 UPF0176 acylphosphatase like domain VAA049_RS07760 PF00581 Rhodanese-like domain VAA049_RS07765 PF00521 DNA gyrase/topoisomerase IV, subunit A VAA049_RS07765 PF03989 DNA gyrase C-terminal domain, beta-propeller VAA049_RS07775 PF00317 Ribonucleotide reductase, all-alpha domain VAA049_RS07775 PF02867 Ribonucleotide reductase, barrel domain VAA049_RS07775 PF03477 ATP cone domain VAA049_RS07780 PF00268 Ribonucleotide reductase, small chain VAA049_RS07785 PF00970 Oxidoreductase FAD-binding domain VAA049_RS07785 PF00175 Oxidoreductase NAD-binding domain VAA049_RS07785 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA049_RS07795 PF00994 Probable molybdopterin binding domain VAA049_RS07810 PF02743 Cache domain VAA049_RS07810 PF00672 HAMP domain VAA049_RS07810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS07825 PF01966 HD domain VAA049_RS07855 PF13737 Transposase DDE domain VAA049_RS07960 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system VAA049_RS07965 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system VAA049_RS08050 PF00583 Acetyltransferase (GNAT) family VAA049_RS08075 PF18698 Histidine kinase sensor domain VAA049_RS08075 PF00672 HAMP domain VAA049_RS08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS08075 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS08090 PF00589 Phage integrase family VAA049_RS08090 PF13495 Phage integrase, N-terminal SAM-like domain VAA049_RS08095 PF00453 Ribosomal protein L20 VAA049_RS08100 PF01632 Ribosomal protein L35 VAA049_RS08105 PF00707 Translation initiation factor IF-3, C-terminal domain VAA049_RS08105 PF05198 Translation initiation factor IF-3, N-terminal domain VAA049_RS08110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAA049_RS08110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VAA049_RS08110 PF02824 TGS domain VAA049_RS08110 PF03129 Anticodon binding domain VAA049_RS08165 PF17482 Phage tail sheath C-terminal domain VAA049_RS08165 PF04984 Phage tail sheath protein subtilisin-like domain VAA049_RS08260 PF00959 Phage lysozyme VAA049_RS08315 PF00717 Peptidase S24-like VAA049_RS08315 PF01381 Helix-turn-helix VAA049_RS08360 PF08669 Glycine cleavage T-protein C-terminal barrel domain VAA049_RS08360 PF01571 Aminomethyltransferase folate-binding domain VAA049_RS08370 PF00464 Serine hydroxymethyltransferase VAA049_RS08375 PF01597 Glycine cleavage H-protein VAA049_RS08380 PF02347 Glycine cleavage system P-protein VAA049_RS08385 PF00194 Eukaryotic-type carbonic anhydrase VAA049_RS08400 PF07943 Penicillin-binding protein 5, C-terminal domain VAA049_RS08400 PF00768 D-alanyl-D-alanine carboxypeptidase VAA049_RS08405 PF00282 Pyridoxal-dependent decarboxylase conserved domain VAA049_RS08410 PF00672 HAMP domain VAA049_RS08410 PF02743 Cache domain VAA049_RS08410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS08445 PF00672 HAMP domain VAA049_RS08445 PF13426 PAS domain VAA049_RS08445 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS08445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS08445 PF14827 Double sensory domain of two-component sensor kinase VAA049_RS08450 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS08450 PF00072 Response regulator receiver domain VAA049_RS08470 PF00128 Alpha amylase, catalytic domain VAA049_RS08485 PF08220 DeoR-like helix-turn-helix domain VAA049_RS08485 PF00455 DeoR C terminal sensor domain VAA049_RS08490 PF03611 PTS system sugar-specific permease component VAA049_RS08495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAA049_RS08500 PF00596 Class II Aldolase and Adducin N-terminal domain VAA049_RS08510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VAA049_RS08515 PF01261 Xylose isomerase-like TIM barrel VAA049_RS08525 PF00072 Response regulator receiver domain VAA049_RS08525 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS08530 PF00672 HAMP domain VAA049_RS08530 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS08530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS08545 PF00871 Acetokinase family VAA049_RS08555 PF07715 TonB-dependent Receptor Plug Domain VAA049_RS08555 PF00593 TonB dependent receptor VAA049_RS08560 PF12833 Helix-turn-helix domain VAA049_RS08565 PF00005 ABC transporter VAA049_RS08570 PF01032 FecCD transport family VAA049_RS08575 PF01032 FecCD transport family VAA049_RS08595 PF13737 Transposase DDE domain VAA049_RS08605 PF05547 Immune inhibitor A peptidase M6 VAA049_RS08605 PF00801 PKD domain VAA049_RS08610 PF03280 Proteobacterial lipase chaperone protein VAA049_RS08615 PF00561 alpha/beta hydrolase fold VAA049_RS08620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS08620 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS08620 PF00672 HAMP domain VAA049_RS08625 PF16458 Beta-prism lectin VAA049_RS08625 PF12563 Hemolytic toxin N terminal VAA049_RS08625 PF07968 Leukocidin/Hemolysin toxin family VAA049_RS08630 PF00657 GDSL-like Lipase/Acylhydrolase VAA049_RS08635 PF05230 MASE2 domain VAA049_RS08635 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS08650 PF07690 Major Facilitator Superfamily VAA049_RS08655 PF03553 Na+/H+ antiporter family VAA049_RS08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS08665 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS08665 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA049_RS08670 PF11849 Domain of unknown function (DUF3369) VAA049_RS08675 PF01467 Cytidylyltransferase-like VAA049_RS08680 PF02540 NAD synthase VAA049_RS08685 PF03605 Anaerobic c4-dicarboxylate membrane transporter VAA049_RS08690 PF00271 Helicase conserved C-terminal domain VAA049_RS08690 PF00270 DEAD/DEAH box helicase VAA049_RS08695 PF13737 Transposase DDE domain VAA049_RS08700 PF01381 Helix-turn-helix VAA049_RS08710 PF01555 DNA methylase VAA049_RS08715 PF00478 IMP dehydrogenase / GMP reductase domain VAA049_RS08730 PF07885 Ion channel VAA049_RS08740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA049_RS08740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAA049_RS08745 PF03853 YjeF-related protein N-terminus VAA049_RS08745 PF01256 Carbohydrate kinase VAA049_RS08755 PF00072 Response regulator receiver domain VAA049_RS08770 PF03889 Alternative ribosome-rescue factor A VAA049_RS08775 PF00313 'Cold-shock' DNA-binding domain VAA049_RS08780 PF00970 Oxidoreductase FAD-binding domain VAA049_RS08780 PF00042 Globin VAA049_RS08780 PF00175 Oxidoreductase NAD-binding domain VAA049_RS08785 PF00158 Sigma-54 interaction domain VAA049_RS08785 PF01590 GAF domain VAA049_RS08795 PF01546 Peptidase family M20/M25/M40 VAA049_RS08795 PF07687 Peptidase dimerisation domain VAA049_RS08800 PF07662 Na+ dependent nucleoside transporter C-terminus VAA049_RS08800 PF07670 Nucleoside recognition VAA049_RS08800 PF01773 Na+ dependent nucleoside transporter N-terminus VAA049_RS08815 PF00672 HAMP domain VAA049_RS08815 PF02743 Cache domain VAA049_RS08815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS08820 PF07726 ATPase family associated with various cellular activities (AAA) VAA049_RS08820 PF17863 AAA lid domain VAA049_RS08825 PF01882 Protein of unknown function DUF58 VAA049_RS08840 PF13519 von Willebrand factor type A domain VAA049_RS08840 PF07584 Aerotolerance regulator N-terminal VAA049_RS08855 PF00313 'Cold-shock' DNA-binding domain VAA049_RS08860 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS08860 PF00563 EAL domain VAA049_RS08860 PF08448 PAS fold VAA049_RS08870 PF12843 Putative quorum-sensing-regulated virulence factor VAA049_RS08880 PF01212 Beta-eliminating lyase VAA049_RS08885 PF03222 Tryptophan/tyrosine permease family VAA049_RS08890 PF00582 Universal stress protein family VAA049_RS08900 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VAA049_RS08900 PF00361 Proton-conducting membrane transporter VAA049_RS08900 PF13244 Domain of unknown function (DUF4040) VAA049_RS08900 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VAA049_RS08905 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L VAA049_RS08910 PF00361 Proton-conducting membrane transporter VAA049_RS08915 PF01899 Na+/H+ ion antiporter subunit VAA049_RS08920 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VAA049_RS08925 PF03334 Na+/H+ antiporter subunit VAA049_RS08935 PF01327 Polypeptide deformylase VAA049_RS08940 PF12561 ToxR activated gene A lipoprotein domain VAA049_RS08940 PF00041 Fibronectin type III domain VAA049_RS08945 PF01266 FAD dependent oxidoreductase VAA049_RS08965 PF00072 Response regulator receiver domain VAA049_RS08965 PF00158 Sigma-54 interaction domain VAA049_RS08965 PF02954 Bacterial regulatory protein, Fis family VAA049_RS08970 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS08970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS08970 PF02743 Cache domain VAA049_RS08985 PF07690 Major Facilitator Superfamily VAA049_RS08990 PF03009 Glycerophosphoryl diester phosphodiesterase family VAA049_RS09000 PF08448 PAS fold VAA049_RS09000 PF13426 PAS domain VAA049_RS09000 PF00563 EAL domain VAA049_RS09000 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS09000 PF05231 MASE1 VAA049_RS09000 PF08447 PAS fold VAA049_RS09005 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS09010 PF00294 pfkB family carbohydrate kinase VAA049_RS09015 PF13407 Periplasmic binding protein domain VAA049_RS09020 PF02653 Branched-chain amino acid transport system / permease component VAA049_RS09025 PF00005 ABC transporter VAA049_RS09030 PF05025 RbsD / FucU transport protein family VAA049_RS09055 PF04717 Type VI secretion system, phage-baseplate injector VAA049_RS09055 PF01471 Putative peptidoglycan binding domain VAA049_RS09070 PF06744 Type VI secretion protein IcmF C-terminal VAA049_RS09070 PF14331 ImcF-related N-terminal domain VAA049_RS09070 PF06761 Intracellular multiplication and human macrophage-killing VAA049_RS09085 PF00158 Sigma-54 interaction domain VAA049_RS09085 PF02954 Bacterial regulatory protein, Fis family VAA049_RS09090 PF00004 ATPase family associated with various cellular activities (AAA) VAA049_RS09090 PF07724 AAA domain (Cdc48 subfamily) VAA049_RS09090 PF17871 AAA lid domain VAA049_RS09090 PF10431 C-terminal, D2-small domain, of ClpB protein VAA049_RS09100 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE VAA049_RS09120 PF05947 Type VI secretion system, TssF VAA049_RS09130 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath VAA049_RS09150 PF00849 RNA pseudouridylate synthase VAA049_RS09155 PF00916 Sulfate permease family VAA049_RS09155 PF01740 STAS domain VAA049_RS09160 PF13419 Haloacid dehalogenase-like hydrolase VAA049_RS09165 PF00563 EAL domain VAA049_RS09165 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS09170 PF00581 Rhodanese-like domain VAA049_RS09175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VAA049_RS09175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAA049_RS09180 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VAA049_RS09180 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VAA049_RS09190 PF07504 Fungalysin/Thermolysin Propeptide Motif VAA049_RS09190 PF01483 Proprotein convertase P-domain VAA049_RS09190 PF01447 Thermolysin metallopeptidase, catalytic domain VAA049_RS09190 PF02868 Thermolysin metallopeptidase, alpha-helical domain VAA049_RS09215 PF02001 Protein of unknown function DUF134 VAA049_RS09225 PF00375 Sodium:dicarboxylate symporter family VAA049_RS09245 PF09278 MerR, DNA binding VAA049_RS09245 PF00376 MerR family regulatory protein VAA049_RS09250 PF07690 Major Facilitator Superfamily VAA049_RS09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS09255 PF03466 LysR substrate binding domain VAA049_RS09260 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS09260 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS09260 PF13188 PAS domain VAA049_RS09260 PF00563 EAL domain VAA049_RS09265 PF01476 LysM domain VAA049_RS09265 PF01551 Peptidase family M23 VAA049_RS09265 PF08525 Opacity-associated protein A N-terminal motif VAA049_RS09275 PF00916 Sulfate permease family VAA049_RS09275 PF01740 STAS domain VAA049_RS09280 PF07670 Nucleoside recognition VAA049_RS09290 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS09290 PF00563 EAL domain VAA049_RS09290 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS09295 PF00005 ABC transporter VAA049_RS09300 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS09305 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS09310 PF12849 PBP superfamily domain VAA049_RS09315 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS09315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS09315 PF00672 HAMP domain VAA049_RS09335 PF07715 TonB-dependent Receptor Plug Domain VAA049_RS09335 PF00593 TonB dependent receptor VAA049_RS09340 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VAA049_RS09340 PF00326 Prolyl oligopeptidase family VAA049_RS09345 PF00270 DEAD/DEAH box helicase VAA049_RS09345 PF00271 Helicase conserved C-terminal domain VAA049_RS09360 PF01476 LysM domain VAA049_RS09360 PF17969 L,D-transpeptidase C-terminal domain VAA049_RS09360 PF03734 L,D-transpeptidase catalytic domain VAA049_RS09365 PF00875 DNA photolyase VAA049_RS09365 PF03441 FAD binding domain of DNA photolyase VAA049_RS09370 PF13411 MerR HTH family regulatory protein VAA049_RS09375 PF08349 Protein of unknown function (DUF1722) VAA049_RS09385 PF01048 Phosphorylase superfamily VAA049_RS09400 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS09405 PF11742 Protein of unknown function (DUF3302) VAA049_RS09410 PF00529 HlyD membrane-fusion protein of T1SS VAA049_RS09410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAA049_RS09425 PF07238 PilZ domain VAA049_RS09425 PF12945 Flagellar protein YcgR VAA049_RS09430 PF03616 Sodium/glutamate symporter VAA049_RS09445 PF02630 SCO1/SenC VAA049_RS09455 PF00375 Sodium:dicarboxylate symporter family VAA049_RS09460 PF01569 PAP2 superfamily VAA049_RS09480 PF00672 HAMP domain VAA049_RS09480 PF02743 Cache domain VAA049_RS09480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS09500 PF08329 Chitinase A, N-terminal domain VAA049_RS09500 PF00704 Glycosyl hydrolases family 18 VAA049_RS09505 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VAA049_RS09510 PF00939 Sodium:sulfate symporter transmembrane region VAA049_RS09520 PF00842 Alanine racemase, C-terminal domain VAA049_RS09520 PF01757 Acyltransferase family VAA049_RS09520 PF01168 Alanine racemase, N-terminal domain VAA049_RS09540 PF13503 Domain of unknown function (DUF4123) VAA049_RS09545 PF04717 Type VI secretion system, phage-baseplate injector VAA049_RS09550 PF05638 Type VI secretion system effector, Hcp VAA049_RS09555 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAA049_RS09555 PF00128 Alpha amylase, catalytic domain VAA049_RS09555 PF02806 Alpha amylase, C-terminal all-beta domain VAA049_RS09560 PF02446 4-alpha-glucanotransferase VAA049_RS09565 PF00343 Carbohydrate phosphorylase VAA049_RS09570 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS09570 PF17874 MalT-like TPR region VAA049_RS09575 PF10928 Protein of unknown function (DUF2810) VAA049_RS09585 PF17200 Single Cache domain 2 VAA049_RS09585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS09585 PF00672 HAMP domain VAA049_RS09590 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAA049_RS09590 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VAA049_RS09595 PF01709 Transcriptional regulator VAA049_RS09620 PF13614 AAA domain VAA049_RS09620 PF18607 ParA helix turn helix domain VAA049_RS09625 PF08775 ParB family VAA049_RS09625 PF02195 ParB-like nuclease domain VAA049_RS09630 PF13416 Bacterial extracellular solute-binding protein VAA049_RS09635 PF13718 GNAT acetyltransferase 2 VAA049_RS09635 PF05127 Helicase VAA049_RS09645 PF00501 AMP-binding enzyme VAA049_RS09655 PF00106 short chain dehydrogenase VAA049_RS09665 PF00072 Response regulator receiver domain VAA049_RS09665 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS09670 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS09670 PF08521 Two-component sensor kinase N-terminal VAA049_RS09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS09675 PF00884 Sulfatase VAA049_RS09675 PF08019 Phosphoethanolamine transferase EptA/EptB VAA049_RS09680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA049_RS09680 PF00005 ABC transporter VAA049_RS09685 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS09685 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA049_RS09690 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS09705 PF00072 Response regulator receiver domain VAA049_RS09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS09710 PF02895 Signal transducing histidine kinase, homodimeric domain VAA049_RS09710 PF09078 CheY binding VAA049_RS09710 PF01584 CheW-like domain VAA049_RS09710 PF01627 Hpt domain VAA049_RS09715 PF01584 CheW-like domain VAA049_RS09720 PF01584 CheW-like domain VAA049_RS09725 PF02203 Tar ligand binding domain homologue VAA049_RS09725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS09725 PF00672 HAMP domain VAA049_RS09730 PF03705 CheR methyltransferase, all-alpha domain VAA049_RS09730 PF01739 CheR methyltransferase, SAM binding domain VAA049_RS09735 PF03975 CheD chemotactic sensory transduction VAA049_RS09740 PF00072 Response regulator receiver domain VAA049_RS09740 PF01339 CheB methylesterase VAA049_RS09745 PF02743 Cache domain VAA049_RS09745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS09745 PF00672 HAMP domain VAA049_RS09755 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS09755 PF00072 Response regulator receiver domain VAA049_RS09765 PF00664 ABC transporter transmembrane region VAA049_RS09765 PF03412 Peptidase C39 family VAA049_RS09765 PF00005 ABC transporter VAA049_RS09780 PF00529 HlyD membrane-fusion protein of T1SS VAA049_RS09785 PF01243 Pyridoxamine 5'-phosphate oxidase VAA049_RS09785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VAA049_RS09790 PF00072 Response regulator receiver domain VAA049_RS09790 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS09795 PF03781 Sulfatase-modifying factor enzyme 1 VAA049_RS09805 PF12833 Helix-turn-helix domain VAA049_RS09810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VAA049_RS09810 PF14850 DNA-binding domain of Proline dehydrogenase VAA049_RS09810 PF00171 Aldehyde dehydrogenase family VAA049_RS09810 PF01619 Proline dehydrogenase VAA049_RS09820 PF00474 Sodium:solute symporter family VAA049_RS09830 PF00672 HAMP domain VAA049_RS09830 PF02743 Cache domain VAA049_RS09830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS09835 PF01037 Lrp/AsnC ligand binding domain VAA049_RS09840 PF00171 Aldehyde dehydrogenase family VAA049_RS09850 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VAA049_RS09850 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VAA049_RS09850 PF01276 Orn/Lys/Arg decarboxylase, major domain VAA049_RS09855 PF13520 Amino acid permease VAA049_RS09860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VAA049_RS09865 PF04013 Putative SAM-dependent RNA methyltransferase VAA049_RS09870 PF03466 LysR substrate binding domain VAA049_RS09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS09875 PF00106 short chain dehydrogenase VAA049_RS09880 PF00672 HAMP domain VAA049_RS09880 PF02743 Cache domain VAA049_RS09880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS09885 PF03466 LysR substrate binding domain VAA049_RS09890 PF13460 NAD(P)H-binding VAA049_RS09900 PF00857 Isochorismatase family VAA049_RS09915 PF00892 EamA-like transporter family VAA049_RS09935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAA049_RS09940 PF05068 Mannitol repressor VAA049_RS09945 PF08125 Mannitol dehydrogenase C-terminal domain VAA049_RS09945 PF01232 Mannitol dehydrogenase Rossmann domain VAA049_RS09950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAA049_RS09950 PF02378 Phosphotransferase system, EIIC VAA049_RS09950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAA049_RS09955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAA049_RS09955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAA049_RS09955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAA049_RS09955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAA049_RS09960 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS09965 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA049_RS09970 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS09975 PF00005 ABC transporter VAA049_RS09980 PF00793 DAHP synthetase I family VAA049_RS09990 PF00672 HAMP domain VAA049_RS09990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS10005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS10005 PF00672 HAMP domain VAA049_RS10005 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS10015 PF00128 Alpha amylase, catalytic domain VAA049_RS10015 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VAA049_RS10020 PF02264 LamB porin VAA049_RS10025 PF07148 Maltose operon periplasmic protein precursor (MalM) VAA049_RS10035 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VAA049_RS10055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS10055 PF03466 LysR substrate binding domain VAA049_RS10060 PF07681 DoxX VAA049_RS10065 PF00730 HhH-GPD superfamily base excision DNA repair protein VAA049_RS10065 PF06029 AlkA N-terminal domain VAA049_RS10070 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VAA049_RS10070 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VAA049_RS10080 PF00939 Sodium:sulfate symporter transmembrane region VAA049_RS10085 PF17203 Single cache domain 3 VAA049_RS10085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS10090 PF00072 Response regulator receiver domain VAA049_RS10090 PF12431 Transcriptional regulator VAA049_RS10095 PF03600 Citrate transporter VAA049_RS10100 PF07670 Nucleoside recognition VAA049_RS10105 PF07670 Nucleoside recognition VAA049_RS10110 PF00462 Glutaredoxin VAA049_RS10115 PF00892 EamA-like transporter family VAA049_RS10120 PF13609 Gram-negative porin VAA049_RS10125 PF02566 OsmC-like protein VAA049_RS10130 PF01047 MarR family VAA049_RS10135 PF01557 Fumarylacetoacetate (FAA) hydrolase family VAA049_RS10150 PF12833 Helix-turn-helix domain VAA049_RS10155 PF01810 LysE type translocator VAA049_RS10165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VAA049_RS10175 PF00664 ABC transporter transmembrane region VAA049_RS10175 PF00005 ABC transporter VAA049_RS10185 PF00270 DEAD/DEAH box helicase VAA049_RS10185 PF00271 Helicase conserved C-terminal domain VAA049_RS10190 PF01554 MatE VAA049_RS10195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS10195 PF08447 PAS fold VAA049_RS10200 PF00391 PEP-utilising enzyme, mobile domain VAA049_RS10200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VAA049_RS10200 PF02896 PEP-utilising enzyme, TIM barrel domain VAA049_RS10205 PF03618 Kinase/pyrophosphorylase VAA049_RS10215 PF01070 FMN-dependent dehydrogenase VAA049_RS10220 PF02652 L-lactate permease VAA049_RS10225 PF03466 LysR substrate binding domain VAA049_RS10225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS10235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS10235 PF00672 HAMP domain VAA049_RS10235 PF17200 Single Cache domain 2 VAA049_RS10240 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA049_RS10245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA049_RS10245 PF00005 ABC transporter VAA049_RS10255 PF13654 AAA domain VAA049_RS10255 PF05362 Lon protease (S16) C-terminal proteolytic domain VAA049_RS10260 PF17200 Single Cache domain 2 VAA049_RS10260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS10260 PF00672 HAMP domain VAA049_RS10270 PF07690 Major Facilitator Superfamily VAA049_RS10280 PF06865 Pyrimidine/purine nucleoside phosphorylase VAA049_RS10285 PF05726 Pirin C-terminal cupin domain VAA049_RS10285 PF02678 Pirin VAA049_RS10295 PF00563 EAL domain VAA049_RS10295 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS10300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS10300 PF03466 LysR substrate binding domain VAA049_RS10320 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS10320 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS10320 PF00563 EAL domain VAA049_RS10340 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS10345 PF01047 MarR family VAA049_RS10350 PF01584 CheW-like domain VAA049_RS10350 PF00072 Response regulator receiver domain VAA049_RS10360 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS10365 PF01906 Putative heavy-metal-binding VAA049_RS10380 PF13302 Acetyltransferase (GNAT) domain VAA049_RS10385 PF08402 TOBE domain VAA049_RS10385 PF00005 ABC transporter VAA049_RS10390 PF01547 Bacterial extracellular solute-binding protein VAA049_RS10395 PF14785 Maltose transport system permease protein MalF P2 domain VAA049_RS10395 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS10400 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS10415 PF08220 DeoR-like helix-turn-helix domain VAA049_RS10415 PF00455 DeoR C terminal sensor domain VAA049_RS10420 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS10420 PF08448 PAS fold VAA049_RS10445 PF00313 'Cold-shock' DNA-binding domain VAA049_RS10455 PF05661 Protein of unknown function (DUF808) VAA049_RS10460 PF05958 tRNA (Uracil-5-)-methyltransferase VAA049_RS10470 PF05656 Protein of unknown function (DUF805) VAA049_RS10480 PF01979 Amidohydrolase family VAA049_RS10485 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA049_RS10485 PF03476 MOSC N-terminal beta barrel domain VAA049_RS10485 PF03476 MOSC N-terminal beta barrel domain VAA049_RS10485 PF03473 MOSC domain VAA049_RS10485 PF03473 MOSC domain VAA049_RS10485 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA049_RS10490 PF00672 HAMP domain VAA049_RS10490 PF02743 Cache domain VAA049_RS10490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS10520 PF00005 ABC transporter VAA049_RS10525 PF01032 FecCD transport family VAA049_RS10530 PF01497 Periplasmic binding protein VAA049_RS10535 PF02472 Biopolymer transport protein ExbD/TolR VAA049_RS10540 PF01618 MotA/TolQ/ExbB proton channel family VAA049_RS10545 PF03544 Gram-negative bacterial TonB protein C-terminal VAA049_RS10550 PF04055 Radical SAM superfamily VAA049_RS10555 PF06228 Haem utilisation ChuX/HutX VAA049_RS10560 PF01243 Pyridoxamine 5'-phosphate oxidase VAA049_RS10565 PF00672 HAMP domain VAA049_RS10565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS10570 PF05651 Putative sugar diacid recognition VAA049_RS10570 PF17853 GGDEF-like domain VAA049_RS10570 PF13556 PucR C-terminal helix-turn-helix domain VAA049_RS10575 PF02447 GntP family permease VAA049_RS10580 PF02595 Glycerate kinase family VAA049_RS10605 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VAA049_RS10605 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VAA049_RS10610 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VAA049_RS10615 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VAA049_RS10615 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VAA049_RS10620 PF01966 HD domain VAA049_RS10645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAA049_RS10650 PF03466 LysR substrate binding domain VAA049_RS10650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS10655 PF01053 Cys/Met metabolism PLP-dependent enzyme VAA049_RS10660 PF00155 Aminotransferase class I and II VAA049_RS10665 PF00107 Zinc-binding dehydrogenase VAA049_RS10665 PF08240 Alcohol dehydrogenase GroES-like domain VAA049_RS10700 PF13737 Transposase DDE domain VAA049_RS10705 PF01609 Transposase DDE domain VAA049_RS10705 PF14706 Transposase DNA-binding VAA049_RS10705 PF02281 Transposase Tn5 dimerisation domain VAA049_RS10720 PF03466 LysR substrate binding domain VAA049_RS10720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS10725 PF00291 Pyridoxal-phosphate dependent enzyme VAA049_RS10735 PF02322 Cytochrome bd terminal oxidase subunit II VAA049_RS10740 PF01654 Cytochrome bd terminal oxidase subunit I VAA049_RS10745 PF00392 Bacterial regulatory proteins, gntR family VAA049_RS10745 PF00155 Aminotransferase class I and II VAA049_RS10750 PF00768 D-alanyl-D-alanine carboxypeptidase VAA049_RS10760 PF03922 OmpW family VAA049_RS10770 PF01447 Thermolysin metallopeptidase, catalytic domain VAA049_RS10770 PF03413 Peptidase propeptide and YPEB domain VAA049_RS10770 PF07504 Fungalysin/Thermolysin Propeptide Motif VAA049_RS10770 PF04151 Bacterial pre-peptidase C-terminal domain VAA049_RS10770 PF02868 Thermolysin metallopeptidase, alpha-helical domain VAA049_RS10775 PF08447 PAS fold VAA049_RS10775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS10775 PF13426 PAS domain VAA049_RS10780 PF12262 Bacterial virulence factor lipase N-terminal VAA049_RS10785 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAA049_RS10800 PF00128 Alpha amylase, catalytic domain VAA049_RS10805 PF00248 Aldo/keto reductase family VAA049_RS10820 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS10825 PF13520 Amino acid permease VAA049_RS10840 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAA049_RS10840 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAA049_RS10850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAA049_RS10855 PF02566 OsmC-like protein VAA049_RS10860 PF01595 Cyclin M transmembrane N-terminal domain VAA049_RS10860 PF00571 CBS domain VAA049_RS10860 PF03471 Transporter associated domain VAA049_RS10865 PF14602 Hexapeptide repeat of succinyl-transferase VAA049_RS10865 PF12464 Maltose acetyltransferase VAA049_RS10870 PF00892 EamA-like transporter family VAA049_RS10880 PF03466 LysR substrate binding domain VAA049_RS10880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS10900 PF00501 AMP-binding enzyme VAA049_RS10900 PF13193 AMP-binding enzyme C-terminal domain VAA049_RS10905 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VAA049_RS10910 PF01329 Pterin 4 alpha carbinolamine dehydratase VAA049_RS10915 PF00583 Acetyltransferase (GNAT) family VAA049_RS10920 PF00202 Aminotransferase class-III VAA049_RS10925 PF06339 Ectoine synthase VAA049_RS10930 PF13840 ACT domain VAA049_RS10930 PF00696 Amino acid kinase family VAA049_RS10940 PF00118 TCP-1/cpn60 chaperonin family VAA049_RS10945 PF00166 Chaperonin 10 Kd subunit VAA049_RS10950 PF03448 MgtE intracellular N domain VAA049_RS10950 PF00571 CBS domain VAA049_RS10950 PF01769 Divalent cation transporter VAA049_RS10960 PF17810 Arginine decarboxylase helical bundle domain VAA049_RS10960 PF17944 Arginine decarboxylase C-terminal helical extension VAA049_RS10960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VAA049_RS10965 PF00491 Arginase family VAA049_RS10970 PF04389 Peptidase family M28 VAA049_RS10970 PF04151 Bacterial pre-peptidase C-terminal domain VAA049_RS10975 PF02868 Thermolysin metallopeptidase, alpha-helical domain VAA049_RS10975 PF04151 Bacterial pre-peptidase C-terminal domain VAA049_RS10975 PF03413 Peptidase propeptide and YPEB domain VAA049_RS10975 PF07504 Fungalysin/Thermolysin Propeptide Motif VAA049_RS10975 PF01447 Thermolysin metallopeptidase, catalytic domain VAA049_RS10980 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading VAA049_RS10980 PF18416 N-acetylglucosamine binding protein domain 2 VAA049_RS10985 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VAA049_RS10990 PF01575 MaoC like domain VAA049_RS10995 PF12849 PBP superfamily domain VAA049_RS11005 PF00575 S1 RNA binding domain VAA049_RS11005 PF08206 Ribonuclease B OB domain VAA049_RS11005 PF00773 RNB domain VAA049_RS11010 PF03880 DbpA RNA binding domain VAA049_RS11010 PF00270 DEAD/DEAH box helicase VAA049_RS11010 PF00271 Helicase conserved C-terminal domain VAA049_RS11020 PF00884 Sulfatase VAA049_RS11025 PF00294 pfkB family carbohydrate kinase VAA049_RS11040 PF13419 Haloacid dehalogenase-like hydrolase VAA049_RS11055 PF00684 DnaJ central domain VAA049_RS11055 PF01556 DnaJ C terminal domain VAA049_RS11055 PF00226 DnaJ domain VAA049_RS11070 PF00563 EAL domain VAA049_RS11070 PF00498 FHA domain VAA049_RS11070 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS11075 PF12241 Trans-2-enoyl-CoA reductase catalytic region VAA049_RS11075 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VAA049_RS11075 PF07055 Enoyl reductase FAD binding domain VAA049_RS11080 PF13472 GDSL-like Lipase/Acylhydrolase family VAA049_RS11085 PF00005 ABC transporter VAA049_RS11095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VAA049_RS11095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VAA049_RS11105 PF02626 Carboxyltransferase domain, subdomain A and B VAA049_RS11115 PF03746 LamB/YcsF family VAA049_RS11125 PF16363 GDP-mannose 4,6 dehydratase VAA049_RS11130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS11130 PF00672 HAMP domain VAA049_RS11130 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS11135 PF03222 Tryptophan/tyrosine permease family VAA049_RS11145 PF04336 Acyl carrier protein phosphodiesterase VAA049_RS11150 PF00271 Helicase conserved C-terminal domain VAA049_RS11150 PF00270 DEAD/DEAH box helicase VAA049_RS11155 PF00440 Bacterial regulatory proteins, tetR family VAA049_RS11155 PF08361 MAATS-type transcriptional repressor, C-terminal region VAA049_RS11160 PF00034 Cytochrome c VAA049_RS11165 PF01212 Beta-eliminating lyase VAA049_RS11170 PF00293 NUDIX domain VAA049_RS11175 PF12592 Protein of unknown function (DUF3763) VAA049_RS11175 PF17868 AAA lid domain VAA049_RS11175 PF07728 AAA domain (dynein-related subfamily) VAA049_RS11180 PF05762 VWA domain containing CoxE-like protein VAA049_RS11190 PF00005 ABC transporter VAA049_RS11195 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA049_RS11200 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS11205 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS11210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS11210 PF03466 LysR substrate binding domain VAA049_RS11235 PF07690 Major Facilitator Superfamily VAA049_RS11240 PF00085 Thioredoxin VAA049_RS11245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VAA049_RS11245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VAA049_RS11250 PF02754 Cysteine-rich domain VAA049_RS11250 PF13183 4Fe-4S dicluster domain VAA049_RS11255 PF00890 FAD binding domain VAA049_RS11260 PF01266 FAD dependent oxidoreductase VAA049_RS11260 PF04324 BFD-like [2Fe-2S] binding domain VAA049_RS11270 PF13407 Periplasmic binding protein domain VAA049_RS11275 PF00072 Response regulator receiver domain VAA049_RS11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS11275 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS11275 PF09308 LuxQ, periplasmic VAA049_RS11310 PF07685 CobB/CobQ-like glutamine amidotransferase domain VAA049_RS11310 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VAA049_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS11325 PF00005 ABC transporter VAA049_RS11325 PF03459 TOBE domain VAA049_RS11350 PF00072 Response regulator receiver domain VAA049_RS11350 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS11350 PF13188 PAS domain VAA049_RS11350 PF08448 PAS fold VAA049_RS11355 PF12805 FUSC-like inner membrane protein yccS VAA049_RS11360 PF13361 UvrD-like helicase C-terminal domain VAA049_RS11360 PF00580 UvrD/REP helicase N-terminal domain VAA049_RS11360 PF12462 DNA helicase IV / RNA helicase N terminal VAA049_RS11375 PF01219 Prokaryotic diacylglycerol kinase VAA049_RS11380 PF00857 Isochorismatase family VAA049_RS11385 PF02142 MGS-like domain VAA049_RS11390 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VAA049_RS11395 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS11395 PF00672 HAMP domain VAA049_RS11395 PF01627 Hpt domain VAA049_RS11395 PF00072 Response regulator receiver domain VAA049_RS11395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS11400 PF02887 Pyruvate kinase, alpha/beta domain VAA049_RS11400 PF00224 Pyruvate kinase, barrel domain VAA049_RS11405 PF07690 Major Facilitator Superfamily VAA049_RS11415 PF02743 Cache domain VAA049_RS11415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS11415 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS11420 PF00072 Response regulator receiver domain VAA049_RS11420 PF14532 Sigma-54 interaction domain VAA049_RS11420 PF02954 Bacterial regulatory protein, Fis family VAA049_RS11430 PF00465 Iron-containing alcohol dehydrogenase VAA049_RS11435 PF00704 Glycosyl hydrolases family 18 VAA049_RS11435 PF06483 Chitinase C VAA049_RS11440 PF00483 Nucleotidyl transferase VAA049_RS11445 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS11460 PF07549 SecD/SecF GG Motif VAA049_RS11460 PF02355 Protein export membrane protein VAA049_RS11460 PF13721 SecD export protein N-terminal TM region VAA049_RS11465 PF02355 Protein export membrane protein VAA049_RS11465 PF07549 SecD/SecF GG Motif VAA049_RS11470 PF00106 short chain dehydrogenase VAA049_RS11475 PF02803 Thiolase, C-terminal domain VAA049_RS11475 PF00108 Thiolase, N-terminal domain VAA049_RS11485 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VAA049_RS11490 PF08402 TOBE domain VAA049_RS11490 PF00005 ABC transporter VAA049_RS11495 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS11505 PF07690 Major Facilitator Superfamily VAA049_RS11510 PF05231 MASE1 VAA049_RS11510 PF07730 Histidine kinase VAA049_RS11510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS11515 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS11515 PF00072 Response regulator receiver domain VAA049_RS11520 PF01966 HD domain VAA049_RS11530 PF03264 NapC/NirT cytochrome c family, N-terminal region VAA049_RS11535 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VAA049_RS11540 PF01568 Molydopterin dinucleotide binding domain VAA049_RS11540 PF00384 Molybdopterin oxidoreductase VAA049_RS11540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VAA049_RS11550 PF12838 4Fe-4S dicluster domain VAA049_RS11550 PF13187 4Fe-4S dicluster domain VAA049_RS11555 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VAA049_RS11555 PF07730 Histidine kinase VAA049_RS11555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS11555 PF00672 HAMP domain VAA049_RS11560 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS11560 PF00072 Response regulator receiver domain VAA049_RS11565 PF03315 Serine dehydratase beta chain VAA049_RS11565 PF03313 Serine dehydratase alpha chain VAA049_RS11570 PF03606 C4-dicarboxylate anaerobic carrier VAA049_RS11580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS11580 PF00672 HAMP domain VAA049_RS11580 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS11585 PF13419 Haloacid dehalogenase-like hydrolase VAA049_RS11590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA049_RS11590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VAA049_RS11595 PF13488 Glycine zipper VAA049_RS11595 PF00691 OmpA family VAA049_RS11600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS11600 PF00672 HAMP domain VAA049_RS11605 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VAA049_RS11605 PF01266 FAD dependent oxidoreductase VAA049_RS11610 PF00294 pfkB family carbohydrate kinase VAA049_RS11615 PF00251 Glycosyl hydrolases family 32 N-terminal domain VAA049_RS11615 PF08244 Glycosyl hydrolases family 32 C terminal VAA049_RS11620 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS11625 PF00367 phosphotransferase system, EIIB VAA049_RS11625 PF02378 Phosphotransferase system, EIIC VAA049_RS11670 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS11670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAA049_RS11685 PF04143 Sulphur transport VAA049_RS11700 PF00873 AcrB/AcrD/AcrF family VAA049_RS11705 PF00881 Nitroreductase family VAA049_RS11710 PF03992 Antibiotic biosynthesis monooxygenase VAA049_RS11715 PF03466 LysR substrate binding domain VAA049_RS11715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS11725 PF06942 GlpM protein VAA049_RS11740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA049_RS11740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VAA049_RS11765 PF14706 Transposase DNA-binding VAA049_RS11765 PF02281 Transposase Tn5 dimerisation domain VAA049_RS11765 PF01609 Transposase DDE domain VAA049_RS11770 PF02779 Transketolase, pyrimidine binding domain VAA049_RS11770 PF00456 Transketolase, thiamine diphosphate binding domain VAA049_RS11770 PF02780 Transketolase, C-terminal domain VAA049_RS11775 PF00923 Transaldolase/Fructose-6-phosphate aldolase VAA049_RS11785 PF04198 Putative sugar-binding domain VAA049_RS11790 PF00704 Glycosyl hydrolases family 18 VAA049_RS11790 PF08329 Chitinase A, N-terminal domain VAA049_RS11795 PF00581 Rhodanese-like domain VAA049_RS11805 PF00899 ThiF family VAA049_RS11810 PF00994 Probable molybdopterin binding domain VAA049_RS11810 PF03453 MoeA N-terminal region (domain I and II) VAA049_RS11810 PF03454 MoeA C-terminal region (domain IV) VAA049_RS11815 PF01227 GTP cyclohydrolase I VAA049_RS11820 PF01641 SelR domain VAA049_RS11820 PF01625 Peptide methionine sulfoxide reductase VAA049_RS11825 PF01268 Formate--tetrahydrofolate ligase VAA049_RS11830 PF01741 Large-conductance mechanosensitive channel, MscL VAA049_RS11845 PF13419 Haloacid dehalogenase-like hydrolase VAA049_RS11850 PF14760 Rnk N-terminus VAA049_RS11850 PF01272 Transcription elongation factor, GreA/GreB, C-term VAA049_RS11855 PF13419 Haloacid dehalogenase-like hydrolase VAA049_RS11860 PF00202 Aminotransferase class-III VAA049_RS11865 PF00266 Aminotransferase class-V VAA049_RS11875 PF00005 ABC transporter VAA049_RS11880 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS11885 PF00392 Bacterial regulatory proteins, gntR family VAA049_RS11885 PF07702 UTRA domain VAA049_RS11895 PF00854 POT family VAA049_RS11920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA049_RS11925 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS11930 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS11930 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA049_RS11935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA049_RS11935 PF00005 ABC transporter VAA049_RS11940 PF12804 MobA-like NTP transferase domain VAA049_RS11940 PF03479 Plants and Prokaryotes Conserved (PCC) domain VAA049_RS11940 PF00132 Bacterial transferase hexapeptide (six repeats) VAA049_RS11955 PF02798 Glutathione S-transferase, N-terminal domain VAA049_RS11955 PF00043 Glutathione S-transferase, C-terminal domain VAA049_RS11975 PF03061 Thioesterase superfamily VAA049_RS11985 PF12793 Sugar transport-related sRNA regulator N-term VAA049_RS11985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA049_RS11990 PF07715 TonB-dependent Receptor Plug Domain VAA049_RS11990 PF04886 PT repeat VAA049_RS11990 PF00593 TonB dependent receptor VAA049_RS11995 PF03466 LysR substrate binding domain VAA049_RS11995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS12000 PF13607 Succinyl-CoA ligase like flavodoxin domain VAA049_RS12000 PF13380 CoA binding domain VAA049_RS12000 PF00583 Acetyltransferase (GNAT) family VAA049_RS12010 PF01820 D-ala D-ala ligase N-terminus VAA049_RS12010 PF07478 D-ala D-ala ligase C-terminus VAA049_RS12020 PF01253 Translation initiation factor SUI1 VAA049_RS12080 PF03701 Uncharacterised protein family (UPF0181) VAA049_RS12095 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS12095 PF00072 Response regulator receiver domain VAA049_RS12105 PF02233 NAD(P) transhydrogenase beta subunit VAA049_RS12110 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VAA049_RS12110 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VAA049_RS12110 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VAA049_RS12125 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS12125 PF17158 Membrane-associated sensor, integral membrane domain VAA049_RS12145 PF08448 PAS fold VAA049_RS12145 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS12175 PF08274 PhnA Zinc-Ribbon VAA049_RS12175 PF03831 PhnA domain VAA049_RS12185 PF03741 Integral membrane protein TerC family VAA049_RS12190 PF00149 Calcineurin-like phosphoesterase VAA049_RS12190 PF02872 5'-nucleotidase, C-terminal domain VAA049_RS12195 PF11398 Protein of unknown function (DUF2813) VAA049_RS12200 PF06496 Protein of unknown function (DUF1097) VAA049_RS12205 PF03466 LysR substrate binding domain VAA049_RS12205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS12210 PF01226 Formate/nitrite transporter VAA049_RS12215 PF04264 YceI-like domain VAA049_RS12220 PF01292 Prokaryotic cytochrome b561 VAA049_RS12230 PF00563 EAL domain VAA049_RS12230 PF10388 EAL-domain associated signalling protein domain VAA049_RS12240 PF09335 SNARE associated Golgi protein VAA049_RS12245 PF02416 mttA/Hcf106 family VAA049_RS12250 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS12250 PF00072 Response regulator receiver domain VAA049_RS12255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS12255 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS12255 PF02702 Osmosensitive K+ channel His kinase sensor domain VAA049_RS12255 PF13493 Domain of unknown function (DUF4118) VAA049_RS12260 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg VAA049_RS12260 PF10371 Domain of unknown function VAA049_RS12260 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II VAA049_RS12260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VAA049_RS12260 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase VAA049_RS12265 PF02705 K+ potassium transporter VAA049_RS12270 PF01926 50S ribosome-binding GTPase VAA049_RS12275 PF07683 Cobalamin synthesis protein cobW C-terminal domain VAA049_RS12275 PF02492 CobW/HypB/UreG, nucleotide-binding domain VAA049_RS12280 PF00654 Voltage gated chloride channel VAA049_RS12290 PF00155 Aminotransferase class I and II VAA049_RS12295 PF00072 Response regulator receiver domain VAA049_RS12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS12300 PF13476 AAA domain VAA049_RS12305 PF00149 Calcineurin-like phosphoesterase VAA049_RS12305 PF12320 Type 5 capsule protein repressor C-terminal domain VAA049_RS12310 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS12310 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VAA049_RS12315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VAA049_RS12315 PF00381 PTS HPr component phosphorylation site VAA049_RS12320 PF00294 pfkB family carbohydrate kinase VAA049_RS12325 PF02378 Phosphotransferase system, EIIC VAA049_RS12325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VAA049_RS12330 PF18030 RimK PreATP-grasp domain VAA049_RS12330 PF08443 RimK-like ATP-grasp domain VAA049_RS12335 PF00155 Aminotransferase class I and II VAA049_RS12345 PF13597 Anaerobic ribonucleoside-triphosphate reductase VAA049_RS12345 PF03477 ATP cone domain VAA049_RS12370 PF09722 Protein of unknown function (DUF2384) VAA049_RS12410 PF01965 DJ-1/PfpI family VAA049_RS12410 PF12833 Helix-turn-helix domain VAA049_RS12435 PF02016 LD-carboxypeptidase N-terminal domain VAA049_RS12435 PF17676 LD-carboxypeptidase C-terminal domain VAA049_RS12525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAA049_RS12570 PF12464 Maltose acetyltransferase VAA049_RS12570 PF14602 Hexapeptide repeat of succinyl-transferase VAA049_RS12600 PF00583 Acetyltransferase (GNAT) family VAA049_RS12610 PF13302 Acetyltransferase (GNAT) domain VAA049_RS12625 PF02567 Phenazine biosynthesis-like protein VAA049_RS12680 PF13302 Acetyltransferase (GNAT) domain VAA049_RS12685 PF13737 Transposase DDE domain VAA049_RS12720 PF00005 ABC transporter VAA049_RS12725 PF01032 FecCD transport family VAA049_RS12730 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VAA049_RS12740 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VAA049_RS12745 PF02654 Cobalamin-5-phosphate synthase VAA049_RS12750 PF02277 Phosphoribosyltransferase VAA049_RS12755 PF01641 SelR domain VAA049_RS12760 PF00375 Sodium:dicarboxylate symporter family VAA049_RS12765 PF08411 Exonuclease C-terminal VAA049_RS12765 PF00929 Exonuclease VAA049_RS12770 PF03788 LrgA family VAA049_RS12775 PF04172 LrgB-like family VAA049_RS12780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VAA049_RS12780 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VAA049_RS12790 PF02222 ATP-grasp domain VAA049_RS12800 PF05724 Thiopurine S-methyltransferase (TPMT) VAA049_RS12815 PF00216 Bacterial DNA-binding protein VAA049_RS12820 PF03483 B3/4 domain VAA049_RS12820 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VAA049_RS12820 PF03147 Ferredoxin-fold anticodon binding domain VAA049_RS12820 PF03484 tRNA synthetase B5 domain VAA049_RS12820 PF01588 Putative tRNA binding domain VAA049_RS12825 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VAA049_RS12825 PF01409 tRNA synthetases class II core domain (F) VAA049_RS12835 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS12835 PF00072 Response regulator receiver domain VAA049_RS12860 PF01066 CDP-alcohol phosphatidyltransferase VAA049_RS12865 PF01541 GIY-YIG catalytic domain VAA049_RS12865 PF02151 UvrB/uvrC motif VAA049_RS12865 PF08459 UvrC Helix-hairpin-helix N-terminal VAA049_RS12870 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS12870 PF00072 Response regulator receiver domain VAA049_RS12875 PF00136 DNA polymerase family B VAA049_RS12875 PF03104 DNA polymerase family B, exonuclease domain VAA049_RS12880 PF00563 EAL domain VAA049_RS12880 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS12880 PF13426 PAS domain VAA049_RS12890 PF01132 Elongation factor P (EF-P) OB domain VAA049_RS12890 PF09285 Elongation factor P, C-terminal VAA049_RS12890 PF08207 Elongation factor P (EF-P) KOW-like domain VAA049_RS12895 PF04269 Protein of unknown function, DUF440 VAA049_RS12905 PF07702 UTRA domain VAA049_RS12905 PF00392 Bacterial regulatory proteins, gntR family VAA049_RS12910 PF01979 Amidohydrolase family VAA049_RS12915 PF00491 Arginase family VAA049_RS12920 PF17391 Urocanase N-terminal domain VAA049_RS12920 PF17392 Urocanase C-terminal domain VAA049_RS12920 PF01175 Urocanase Rossmann-like domain VAA049_RS12925 PF00221 Aromatic amino acid lyase VAA049_RS12935 PF00089 Trypsin VAA049_RS12940 PF04191 Phospholipid methyltransferase VAA049_RS12945 PF13183 4Fe-4S dicluster domain VAA049_RS12945 PF02913 FAD linked oxidases, C-terminal domain VAA049_RS12945 PF01565 FAD binding domain VAA049_RS12960 PF00691 OmpA family VAA049_RS12960 PF13488 Glycine zipper VAA049_RS12980 PF01259 SAICAR synthetase VAA049_RS12990 PF03949 Malic enzyme, NAD binding domain VAA049_RS12990 PF00390 Malic enzyme, N-terminal domain VAA049_RS13000 PF02698 DUF218 domain VAA049_RS13005 PF08448 PAS fold VAA049_RS13005 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS13010 PF00266 Aminotransferase class-V VAA049_RS13020 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS13025 PF00664 ABC transporter transmembrane region VAA049_RS13025 PF00005 ABC transporter VAA049_RS13030 PF00664 ABC transporter transmembrane region VAA049_RS13030 PF00005 ABC transporter VAA049_RS13035 PF01479 S4 domain VAA049_RS13035 PF00849 RNA pseudouridylate synthase VAA049_RS13040 PF01300 Telomere recombination VAA049_RS13045 PF02811 PHP domain VAA049_RS13050 PF08056 Tryptophan operon leader peptide VAA049_RS13055 PF04715 Anthranilate synthase component I, N terminal region VAA049_RS13055 PF00425 chorismate binding enzyme VAA049_RS13060 PF00117 Glutamine amidotransferase class-I VAA049_RS13065 PF00591 Glycosyl transferase family, a/b domain VAA049_RS13065 PF02885 Glycosyl transferase family, helical bundle domain VAA049_RS13070 PF00218 Indole-3-glycerol phosphate synthase VAA049_RS13070 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VAA049_RS13075 PF00291 Pyridoxal-phosphate dependent enzyme VAA049_RS13080 PF00290 Tryptophan synthase alpha chain VAA049_RS13085 PF00375 Sodium:dicarboxylate symporter family VAA049_RS13090 PF00265 Thymidine kinase VAA049_RS13095 PF01336 OB-fold nucleic acid binding domain VAA049_RS13095 PF02938 GAD domain VAA049_RS13095 PF00152 tRNA synthetases class II (D, K and N) VAA049_RS13100 PF01904 Protein of unknown function DUF72 VAA049_RS13105 PF13649 Methyltransferase domain VAA049_RS13110 PF08003 Protein of unknown function (DUF1698) VAA049_RS13115 PF08443 RimK-like ATP-grasp domain VAA049_RS13115 PF18030 RimK PreATP-grasp domain VAA049_RS13130 PF00266 Aminotransferase class-V VAA049_RS13140 PF00989 PAS fold VAA049_RS13140 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS13140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS13155 PF04994 TfoX C-terminal domain VAA049_RS13155 PF04993 TfoX N-terminal domain VAA049_RS13165 PF03956 Lysine exporter LysO VAA049_RS13175 PF00282 Pyridoxal-dependent decarboxylase conserved domain VAA049_RS13180 PF01418 Helix-turn-helix domain, rpiR family VAA049_RS13180 PF01380 SIS domain VAA049_RS13185 PF00171 Aldehyde dehydrogenase family VAA049_RS13185 PF00465 Iron-containing alcohol dehydrogenase VAA049_RS13190 PF00462 Glutaredoxin VAA049_RS13195 PF06826 Predicted Permease Membrane Region VAA049_RS13195 PF02080 TrkA-C domain VAA049_RS13200 PF00004 ATPase family associated with various cellular activities (AAA) VAA049_RS13200 PF07724 AAA domain (Cdc48 subfamily) VAA049_RS13200 PF10431 C-terminal, D2-small domain, of ClpB protein VAA049_RS13200 PF02861 Clp amino terminal domain, pathogenicity island component VAA049_RS13200 PF17871 AAA lid domain VAA049_RS13205 PF02617 ATP-dependent Clp protease adaptor protein ClpS VAA049_RS13210 PF00313 'Cold-shock' DNA-binding domain VAA049_RS13215 PF03971 Monomeric isocitrate dehydrogenase VAA049_RS13220 PF00849 RNA pseudouridylate synthase VAA049_RS13225 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VAA049_RS13225 PF01502 Phosphoribosyl-AMP cyclohydrolase VAA049_RS13230 PF00977 Histidine biosynthesis protein VAA049_RS13235 PF00977 Histidine biosynthesis protein VAA049_RS13240 PF00117 Glutamine amidotransferase class-I VAA049_RS13245 PF08645 Polynucleotide kinase 3 phosphatase VAA049_RS13245 PF00475 Imidazoleglycerol-phosphate dehydratase VAA049_RS13250 PF00155 Aminotransferase class I and II VAA049_RS13255 PF00815 Histidinol dehydrogenase VAA049_RS13260 PF01634 ATP phosphoribosyltransferase VAA049_RS13260 PF08029 HisG, C-terminal domain VAA049_RS13265 PF03553 Na+/H+ antiporter family VAA049_RS13270 PF00816 H-NS histone family VAA049_RS13275 PF00294 pfkB family carbohydrate kinase VAA049_RS13285 PF04356 Protein of unknown function (DUF489) VAA049_RS13290 PF08328 Adenylosuccinate lyase C-terminal VAA049_RS13290 PF00206 Lyase VAA049_RS13300 PF16036 Chalcone isomerase-like VAA049_RS13325 PF00106 short chain dehydrogenase VAA049_RS13335 PF01435 Peptidase family M48 VAA049_RS13350 PF08241 Methyltransferase domain VAA049_RS13355 PF00155 Aminotransferase class I and II VAA049_RS13360 PF04055 Radical SAM superfamily VAA049_RS13360 PF06968 Biotin and Thiamin Synthesis associated domain VAA049_RS13365 PF00202 Aminotransferase class-III VAA049_RS13370 PF02403 Seryl-tRNA synthetase N-terminal domain VAA049_RS13370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAA049_RS13375 PF16193 AAA C-terminal domain VAA049_RS13375 PF00004 ATPase family associated with various cellular activities (AAA) VAA049_RS13375 PF12002 MgsA AAA+ ATPase C terminal VAA049_RS13380 PF03548 Outer membrane lipoprotein carrier protein LolA VAA049_RS13385 PF02810 SEC-C motif VAA049_RS13385 PF07517 SecA DEAD-like domain VAA049_RS13385 PF01043 SecA preprotein cross-linking domain VAA049_RS13385 PF07516 SecA Wing and Scaffold domain VAA049_RS13390 PF01207 Dihydrouridine synthase (Dus) VAA049_RS13395 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS13395 PF05230 MASE2 domain VAA049_RS13400 PF00005 ABC transporter VAA049_RS13405 PF02653 Branched-chain amino acid transport system / permease component VAA049_RS13415 PF09905 DNA-binding protein VF530 VAA049_RS13420 PF04217 Protein of unknown function, DUF412 VAA049_RS13425 PF00871 Acetokinase family VAA049_RS13430 PF01515 Phosphate acetyl/butaryl transferase VAA049_RS13430 PF07085 DRTGG domain VAA049_RS13435 PF13409 Glutathione S-transferase, N-terminal domain VAA049_RS13445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA049_RS13445 PF00005 ABC transporter VAA049_RS13450 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA049_RS13450 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS13455 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS13460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA049_RS13470 PF13188 PAS domain VAA049_RS13470 PF00072 Response regulator receiver domain VAA049_RS13470 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS13470 PF08448 PAS fold VAA049_RS13470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS13475 PF02954 Bacterial regulatory protein, Fis family VAA049_RS13475 PF00158 Sigma-54 interaction domain VAA049_RS13475 PF00072 Response regulator receiver domain VAA049_RS13480 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS13480 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS13480 PF13188 PAS domain VAA049_RS13480 PF00563 EAL domain VAA049_RS13485 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS13485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS13490 PF13426 PAS domain VAA049_RS13490 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS13490 PF13188 PAS domain VAA049_RS13490 PF00989 PAS fold VAA049_RS13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS13500 PF00072 Response regulator receiver domain VAA049_RS13515 PF01300 Telomere recombination VAA049_RS13515 PF03481 Putative GTP-binding controlling metal-binding VAA049_RS13535 PF01161 Phosphatidylethanolamine-binding protein VAA049_RS13545 PF06483 Chitinase C VAA049_RS13545 PF00704 Glycosyl hydrolases family 18 VAA049_RS13560 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAA049_RS13560 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAA049_RS13565 PF01022 Bacterial regulatory protein, arsR family VAA049_RS13570 PF02386 Cation transport protein VAA049_RS13575 PF02080 TrkA-C domain VAA049_RS13575 PF02254 TrkA-N domain VAA049_RS13585 PF00072 Response regulator receiver domain VAA049_RS13585 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS13590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS13590 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS13590 PF02702 Osmosensitive K+ channel His kinase sensor domain VAA049_RS13590 PF13493 Domain of unknown function (DUF4118) VAA049_RS13595 PF03824 High-affinity nickel-transport protein VAA049_RS13600 PF02583 Metal-sensitive transcriptional repressor VAA049_RS13615 PF17848 Acetyl-coA carboxylase zinc finger domain VAA049_RS13615 PF01039 Carboxyl transferase domain VAA049_RS13630 PF13737 Transposase DDE domain VAA049_RS13650 PF08448 PAS fold VAA049_RS13650 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS13660 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VAA049_RS13675 PF01037 Lrp/AsnC ligand binding domain VAA049_RS13675 PF13404 AsnC-type helix-turn-helix domain VAA049_RS13680 PF00291 Pyridoxal-phosphate dependent enzyme VAA049_RS13685 PF01343 Peptidase family S49 VAA049_RS13685 PF08496 Peptidase family S49 N-terminal VAA049_RS13690 PF00106 short chain dehydrogenase VAA049_RS13695 PF03692 Putative zinc- or iron-chelating domain VAA049_RS13700 PF03692 Putative zinc- or iron-chelating domain VAA049_RS13705 PF13662 Toprim domain VAA049_RS13705 PF02132 RecR protein VAA049_RS13710 PF02575 YbaB/EbfC DNA-binding family VAA049_RS13715 PF12170 DNA polymerase III tau subunit V interacting with alpha VAA049_RS13715 PF12169 DNA polymerase III subunits gamma and tau domain III VAA049_RS13715 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VAA049_RS13720 PF00156 Phosphoribosyl transferase domain VAA049_RS13725 PF04304 Protein of unknown function (DUF454) VAA049_RS13735 PF00072 Response regulator receiver domain VAA049_RS13740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS13740 PF03466 LysR substrate binding domain VAA049_RS13745 PF00881 Nitroreductase family VAA049_RS13750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAA049_RS13750 PF00378 Enoyl-CoA hydratase/isomerase VAA049_RS13750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAA049_RS13755 PF02803 Thiolase, C-terminal domain VAA049_RS13755 PF00108 Thiolase, N-terminal domain VAA049_RS13760 PF04542 Sigma-70 region 2 VAA049_RS13760 PF08281 Sigma-70, region 4 VAA049_RS13770 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAA049_RS13775 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VAA049_RS13780 PF01451 Low molecular weight phosphotyrosine protein phosphatase VAA049_RS13785 PF12557 Cob(I)alamin adenosyltransferase N terminal VAA049_RS13785 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VAA049_RS13795 PF05170 AsmA family VAA049_RS13800 PF00485 Phosphoribulokinase / Uridine kinase family VAA049_RS13810 PF10609 NUBPL iron-transfer P-loop NTPase VAA049_RS13815 PF01588 Putative tRNA binding domain VAA049_RS13815 PF09334 tRNA synthetases class I (M) VAA049_RS13825 PF01048 Phosphorylase superfamily VAA049_RS13830 PF00403 Heavy-metal-associated domain VAA049_RS13840 PF01743 Poly A polymerase head domain VAA049_RS13840 PF00571 CBS domain VAA049_RS13845 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS13845 PF07694 5TMR of 5TMR-LYT VAA049_RS13850 PF02391 MoaE protein VAA049_RS13855 PF02597 ThiS family VAA049_RS13860 PF01967 MoaC family VAA049_RS13865 PF00994 Probable molybdopterin binding domain VAA049_RS13870 PF06463 Molybdenum Cofactor Synthesis C VAA049_RS13870 PF04055 Radical SAM superfamily VAA049_RS13875 PF01933 Uncharacterised protein family UPF0052 VAA049_RS13880 PF01627 Hpt domain VAA049_RS13885 PF00158 Sigma-54 interaction domain VAA049_RS13885 PF02954 Bacterial regulatory protein, Fis family VAA049_RS13885 PF00072 Response regulator receiver domain VAA049_RS13895 PF04851 Type III restriction enzyme, res subunit VAA049_RS13895 PF00271 Helicase conserved C-terminal domain VAA049_RS13895 PF12344 Ultra-violet resistance protein B VAA049_RS13895 PF02151 UvrB/uvrC motif VAA049_RS13895 PF17757 UvrB interaction domain VAA049_RS13905 PF02508 Rnf-Nqr subunit, membrane protein VAA049_RS13910 PF04060 Putative Fe-S cluster VAA049_RS13915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VAA049_RS13915 PF10531 SLBB domain VAA049_RS13915 PF12838 4Fe-4S dicluster domain VAA049_RS13915 PF13375 RnfC Barrel sandwich hybrid domain VAA049_RS13920 PF03116 NQR2, RnfD, RnfE family VAA049_RS13925 PF04205 FMN-binding domain VAA049_RS13930 PF02508 Rnf-Nqr subunit, membrane protein VAA049_RS13935 PF00633 Helix-hairpin-helix motif VAA049_RS13935 PF00730 HhH-GPD superfamily base excision DNA repair protein VAA049_RS13935 PF10576 Iron-sulfur binding domain of endonuclease III VAA049_RS13940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VAA049_RS13945 PF10952 Protein of unknown function (DUF2753) VAA049_RS13950 PF00691 OmpA family VAA049_RS13950 PF18393 MotY N-terminal domain VAA049_RS13960 PF00929 Exonuclease VAA049_RS13965 PF13726 Na+-H+ antiporter family VAA049_RS13965 PF03553 Na+/H+ antiporter family VAA049_RS13970 PF00156 Phosphoribosyl transferase domain VAA049_RS13975 PF02674 Colicin V production protein VAA049_RS13980 PF05036 Sporulation related domain VAA049_RS13985 PF02875 Mur ligase family, glutamate ligase domain VAA049_RS13985 PF08245 Mur ligase middle domain VAA049_RS13990 PF17848 Acetyl-coA carboxylase zinc finger domain VAA049_RS13990 PF01039 Carboxyl transferase domain VAA049_RS13995 PF01416 tRNA pseudouridine synthase VAA049_RS14005 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VAA049_RS14005 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAA049_RS14010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VAA049_RS14010 PF02378 Phosphotransferase system, EIIC VAA049_RS14010 PF00367 phosphotransferase system, EIIB VAA049_RS14015 PF01979 Amidohydrolase family VAA049_RS14020 PF01047 MarR family VAA049_RS14020 PF00480 ROK family VAA049_RS14025 PF02254 TrkA-N domain VAA049_RS14025 PF00999 Sodium/hydrogen exchanger family VAA049_RS14030 PF00733 Asparagine synthase VAA049_RS14030 PF13537 Glutamine amidotransferase domain VAA049_RS14035 PF02357 Transcription termination factor nusG VAA049_RS14040 PF00854 POT family VAA049_RS14045 PF00762 Ferrochelatase VAA049_RS14050 PF05191 Adenylate kinase, active site lid VAA049_RS14055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS14055 PF00183 Hsp90 protein VAA049_RS14060 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS14065 PF17323 Trans-membrane regulatory protein ToxS VAA049_RS14075 PF12850 Calcineurin-like phosphoesterase superfamily domain VAA049_RS14080 PF01370 NAD dependent epimerase/dehydratase family VAA049_RS14080 PF08338 Domain of unknown function (DUF1731) VAA049_RS14085 PF00106 short chain dehydrogenase VAA049_RS14090 PF00085 Thioredoxin VAA049_RS14095 PF16200 C-terminal region of band_7 VAA049_RS14095 PF01145 SPFH domain / Band 7 family VAA049_RS14100 PF01957 NfeD-like C-terminal, partner-binding VAA049_RS14105 PF13411 MerR HTH family regulatory protein VAA049_RS14115 PF13609 Gram-negative porin VAA049_RS14120 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VAA049_RS14120 PF00533 BRCA1 C Terminus (BRCT) domain VAA049_RS14120 PF03120 NAD-dependent DNA ligase OB-fold domain VAA049_RS14120 PF12826 Helix-hairpin-helix motif VAA049_RS14120 PF01653 NAD-dependent DNA ligase adenylation domain VAA049_RS14125 PF04354 ZipA, C-terminal FtsZ-binding domain VAA049_RS14135 PF00291 Pyridoxal-phosphate dependent enzyme VAA049_RS14145 PF00381 PTS HPr component phosphorylation site VAA049_RS14150 PF02896 PEP-utilising enzyme, TIM barrel domain VAA049_RS14150 PF00391 PEP-utilising enzyme, mobile domain VAA049_RS14150 PF05524 PEP-utilising enzyme, N-terminal VAA049_RS14155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VAA049_RS14160 PF01494 FAD binding domain VAA049_RS14165 PF04055 Radical SAM superfamily VAA049_RS14165 PF01938 TRAM domain VAA049_RS14165 PF00919 Uncharacterized protein family UPF0004 VAA049_RS14170 PF02562 PhoH-like protein VAA049_RS14175 PF02130 Uncharacterized protein family UPF0054 VAA049_RS14180 PF00571 CBS domain VAA049_RS14180 PF03471 Transporter associated domain VAA049_RS14185 PF00795 Carbon-nitrogen hydrolase VAA049_RS14190 PF07295 Zinc-ribbon containing domain VAA049_RS14195 PF00133 tRNA synthetases class I (I, L, M and V) VAA049_RS14195 PF13603 Leucyl-tRNA synthetase, Domain 2 VAA049_RS14195 PF08264 Anticodon-binding domain of tRNA VAA049_RS14200 PF04390 Lipopolysaccharide-assembly VAA049_RS14205 PF06144 DNA polymerase III, delta subunit VAA049_RS14205 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VAA049_RS14215 PF02590 Predicted SPOUT methyltransferase VAA049_RS14220 PF03717 Penicillin-binding Protein dimerisation domain VAA049_RS14220 PF00905 Penicillin binding protein transpeptidase domain VAA049_RS14225 PF01098 Cell cycle protein VAA049_RS14230 PF03330 Lytic transglycolase VAA049_RS14230 PF05036 Sporulation related domain VAA049_RS14235 PF00768 D-alanyl-D-alanine carboxypeptidase VAA049_RS14235 PF07943 Penicillin-binding protein 5, C-terminal domain VAA049_RS14245 PF14706 Transposase DNA-binding VAA049_RS14245 PF01609 Transposase DDE domain VAA049_RS14245 PF02281 Transposase Tn5 dimerisation domain VAA049_RS14250 PF04359 Protein of unknown function (DUF493) VAA049_RS14255 PF03099 Biotin/lipoate A/B protein ligase family VAA049_RS14260 PF04055 Radical SAM superfamily VAA049_RS14260 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VAA049_RS14270 PF00464 Serine hydroxymethyltransferase VAA049_RS14290 PF13614 AAA domain VAA049_RS14290 PF02706 Chain length determinant protein VAA049_RS14290 PF13807 G-rich domain on putative tyrosine kinase VAA049_RS14295 PF10531 SLBB domain VAA049_RS14295 PF02563 Polysaccharide biosynthesis/export protein VAA049_RS14295 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VAA049_RS14305 PF02397 Bacterial sugar transferase VAA049_RS14320 PF17945 Beta/Gamma crystallin VAA049_RS14320 PF12561 ToxR activated gene A lipoprotein domain VAA049_RS14335 PF03808 Glycosyl transferase WecB/TagA/CpsF family VAA049_RS14345 PF00534 Glycosyl transferases group 1 VAA049_RS14345 PF13439 Glycosyltransferase Family 4 VAA049_RS14375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VAA049_RS14375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VAA049_RS14375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VAA049_RS14380 PF02350 UDP-N-acetylglucosamine 2-epimerase VAA049_RS14390 PF00873 AcrB/AcrD/AcrF family VAA049_RS14395 PF13533 Biotin-lipoyl like VAA049_RS14420 PF16657 Maltogenic Amylase, C-terminal domain VAA049_RS14420 PF00128 Alpha amylase, catalytic domain VAA049_RS14425 PF02378 Phosphotransferase system, EIIC VAA049_RS14425 PF00367 phosphotransferase system, EIIB VAA049_RS14430 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS14440 PF00005 ABC transporter VAA049_RS14440 PF09383 NIL domain VAA049_RS14445 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS14450 PF03180 NLPA lipoprotein VAA049_RS14455 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VAA049_RS14460 PF07348 Syd protein (SUKH-2) VAA049_RS14465 PF14489 QueF-like protein VAA049_RS14465 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VAA049_RS14475 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS14480 PF11892 Domain of unknown function (DUF3412) VAA049_RS14480 PF03641 Possible lysine decarboxylase VAA049_RS14480 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VAA049_RS14485 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VAA049_RS14485 PF01367 5'-3' exonuclease, C-terminal SAM fold VAA049_RS14495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS14495 PF03466 LysR substrate binding domain VAA049_RS14505 PF02568 Thiamine biosynthesis protein (ThiI) VAA049_RS14505 PF02926 THUMP domain VAA049_RS14515 PF01618 MotA/TolQ/ExbB proton channel family VAA049_RS14520 PF02609 Exonuclease VII small subunit VAA049_RS14525 PF00348 Polyprenyl synthetase VAA049_RS14530 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VAA049_RS14530 PF02780 Transketolase, C-terminal domain VAA049_RS14530 PF02779 Transketolase, pyrimidine binding domain VAA049_RS14535 PF00849 RNA pseudouridylate synthase VAA049_RS14540 PF04287 tRNA pseudouridine synthase C VAA049_RS14555 PF13302 Acetyltransferase (GNAT) domain VAA049_RS14565 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VAA049_RS14570 PF03806 AbgT putative transporter family VAA049_RS14575 PF00444 Ribosomal protein L36 VAA049_RS14580 PF01197 Ribosomal protein L31 VAA049_RS14585 PF01980 tRNA-methyltransferase O VAA049_RS14585 PF18389 TrmO C-terminal domain VAA049_RS14590 PF03129 Anticodon binding domain VAA049_RS14590 PF04073 Aminoacyl-tRNA editing domain VAA049_RS14590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VAA049_RS14605 PF06786 Uncharacterised protein family (UPF0253) VAA049_RS14615 PF02769 AIR synthase related protein, C-terminal domain VAA049_RS14615 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VAA049_RS14615 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VAA049_RS14625 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA049_RS14625 PF01464 Transglycosylase SLT domain VAA049_RS14635 PF14437 MafB19-like deaminase VAA049_RS14640 PF03806 AbgT putative transporter family VAA049_RS14670 PF07963 Prokaryotic N-terminal methylation motif VAA049_RS14670 PF00114 Pilin (bacterial filament) VAA049_RS14675 PF00226 DnaJ domain VAA049_RS14675 PF01556 DnaJ C terminal domain VAA049_RS14675 PF00684 DnaJ central domain VAA049_RS14680 PF00012 Hsp70 protein VAA049_RS14685 PF01025 GrpE VAA049_RS14690 PF01513 ATP-NAD kinase VAA049_RS14695 PF02463 RecF/RecN/SMC N terminal domain VAA049_RS14700 PF04355 SmpA / OmlA family VAA049_RS14705 PF03658 RnfH family Ubiquitin VAA049_RS14710 PF03364 Polyketide cyclase / dehydrase and lipid transport VAA049_RS14715 PF01668 SmpB protein VAA049_RS14720 PF18766 SWI2/SNF2 ATPase VAA049_RS14720 PF11867 Domain of unknown function (DUF3387) VAA049_RS14720 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VAA049_RS14725 PF01420 Type I restriction modification DNA specificity domain VAA049_RS14730 PF02384 N-6 DNA Methylase VAA049_RS14750 PF11953 Domain of unknown function (DUF3470) VAA049_RS14750 PF00037 4Fe-4S binding domain VAA049_RS14755 PF08032 RNA 2'-O ribose methyltransferase substrate binding VAA049_RS14755 PF00588 SpoU rRNA Methylase family VAA049_RS14765 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VAA049_RS14770 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VAA049_RS14775 PF04223 Citrate lyase, alpha subunit (CitF) VAA049_RS14780 PF03328 HpcH/HpaI aldolase/citrate lyase family VAA049_RS14785 PF06857 Malonate decarboxylase delta subunit (MdcD) VAA049_RS14790 PF08218 Citrate lyase ligase C-terminal domain VAA049_RS14795 PF03390 2-hydroxycarboxylate transporter family VAA049_RS14800 PF04277 Oxaloacetate decarboxylase, gamma chain VAA049_RS14805 PF02436 Conserved carboxylase domain VAA049_RS14805 PF00364 Biotin-requiring enzyme VAA049_RS14805 PF00682 HMGL-like VAA049_RS14810 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VAA049_RS14815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS14815 PF17203 Single cache domain 3 VAA049_RS14820 PF00072 Response regulator receiver domain VAA049_RS14820 PF12431 Transcriptional regulator VAA049_RS14835 PF03466 LysR substrate binding domain VAA049_RS14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS14840 PF01266 FAD dependent oxidoreductase VAA049_RS14845 PF01235 Sodium:alanine symporter family VAA049_RS14850 PF00753 Metallo-beta-lactamase superfamily VAA049_RS14850 PF14863 Alkyl sulfatase dimerisation VAA049_RS14850 PF14864 Alkyl sulfatase C-terminal VAA049_RS14855 PF03466 LysR substrate binding domain VAA049_RS14855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS14860 PF01648 4'-phosphopantetheinyl transferase superfamily VAA049_RS14860 PF17837 4'-phosphopantetheinyl transferase N-terminal domain VAA049_RS14865 PF00005 ABC transporter VAA049_RS14870 PF01032 FecCD transport family VAA049_RS14875 PF01032 FecCD transport family VAA049_RS14880 PF01497 Periplasmic binding protein VAA049_RS14895 PF00425 chorismate binding enzyme VAA049_RS14900 PF00501 AMP-binding enzyme VAA049_RS14900 PF13193 AMP-binding enzyme C-terminal domain VAA049_RS14905 PF00857 Isochorismatase family VAA049_RS14905 PF00550 Phosphopantetheine attachment site VAA049_RS14910 PF01184 GPR1/FUN34/yaaH family VAA049_RS14915 PF00704 Glycosyl hydrolases family 18 VAA049_RS14915 PF06483 Chitinase C VAA049_RS14920 PF02540 NAD synthase VAA049_RS14920 PF00117 Glutamine amidotransferase class-I VAA049_RS14920 PF00958 GMP synthase C terminal domain VAA049_RS14925 PF00571 CBS domain VAA049_RS14925 PF00478 IMP dehydrogenase / GMP reductase domain VAA049_RS14930 PF02601 Exonuclease VII, large subunit VAA049_RS14930 PF13742 OB-fold nucleic acid binding domain VAA049_RS14945 PF01926 50S ribosome-binding GTPase VAA049_RS14945 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VAA049_RS14950 PF13360 PQQ-like domain VAA049_RS14955 PF09976 Tetratricopeptide repeat-like domain VAA049_RS14960 PF13393 Histidyl-tRNA synthetase VAA049_RS14960 PF03129 Anticodon binding domain VAA049_RS14965 PF04551 GcpE protein VAA049_RS14970 PF13464 Domain of unknown function (DUF4115) VAA049_RS14975 PF04055 Radical SAM superfamily VAA049_RS14980 PF00334 Nucleoside diphosphate kinase VAA049_RS14985 PF00883 Cytosol aminopeptidase family, catalytic domain VAA049_RS14985 PF12404 Peptidase VAA049_RS14990 PF04384 Iron-sulphur cluster assembly VAA049_RS14995 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA049_RS15000 PF00012 Hsp70 protein VAA049_RS15005 PF00226 DnaJ domain VAA049_RS15005 PF07743 HSCB C-terminal oligomerisation domain VAA049_RS15010 PF01521 Iron-sulphur cluster biosynthesis VAA049_RS15015 PF01592 NifU-like N terminal domain VAA049_RS15020 PF00266 Aminotransferase class-V VAA049_RS15025 PF02082 Transcriptional regulator VAA049_RS15030 PF00588 SpoU rRNA Methylase family VAA049_RS15035 PF00459 Inositol monophosphatase family VAA049_RS15040 PF02355 Protein export membrane protein VAA049_RS15040 PF07549 SecD/SecF GG Motif VAA049_RS15045 PF13721 SecD export protein N-terminal TM region VAA049_RS15045 PF07549 SecD/SecF GG Motif VAA049_RS15045 PF02355 Protein export membrane protein VAA049_RS15050 PF02699 Preprotein translocase subunit VAA049_RS15055 PF01702 Queuine tRNA-ribosyltransferase VAA049_RS15065 PF02547 Queuosine biosynthesis protein VAA049_RS15070 PF00571 CBS domain VAA049_RS15075 PF00463 Isocitrate lyase family VAA049_RS15080 PF01274 Malate synthase VAA049_RS15085 PF03466 LysR substrate binding domain VAA049_RS15085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS15090 PF10417 C-terminal domain of 1-Cys peroxiredoxin VAA049_RS15090 PF00578 AhpC/TSA family VAA049_RS15095 PF03932 CutC family VAA049_RS15100 PF03976 Polyphosphate kinase 2 (PPK2) VAA049_RS15105 PF01895 PhoU domain VAA049_RS15110 PF00005 ABC transporter VAA049_RS15115 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS15120 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS15125 PF02503 Polyphosphate kinase middle domain VAA049_RS15125 PF13089 Polyphosphate kinase N-terminal domain VAA049_RS15125 PF17941 Polyphosphate kinase C-terminal domain 1 VAA049_RS15125 PF13090 Polyphosphate kinase C-terminal domain 2 VAA049_RS15130 PF02541 Ppx/GppA phosphatase family VAA049_RS15135 PF12849 PBP superfamily domain VAA049_RS15140 PF11808 Phosphate regulon sensor protein PhoR VAA049_RS15140 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS15140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS15140 PF00989 PAS fold VAA049_RS15145 PF00072 Response regulator receiver domain VAA049_RS15145 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS15150 PF04381 Putative exonuclease, RdgC VAA049_RS15155 PF16325 Peptidase family U32 C-terminal domain VAA049_RS15155 PF01136 Peptidase family U32 VAA049_RS15160 PF00037 4Fe-4S binding domain VAA049_RS15165 PF00881 Nitroreductase family VAA049_RS15200 PF00004 ATPase family associated with various cellular activities (AAA) VAA049_RS15200 PF10431 C-terminal, D2-small domain, of ClpB protein VAA049_RS15200 PF07724 AAA domain (Cdc48 subfamily) VAA049_RS15200 PF02861 Clp amino terminal domain, pathogenicity island component VAA049_RS15200 PF17871 AAA lid domain VAA049_RS15205 PF02578 Multi-copper polyphenol oxidoreductase laccase VAA049_RS15210 PF00849 RNA pseudouridylate synthase VAA049_RS15210 PF01479 S4 domain VAA049_RS15215 PF13525 Outer membrane lipoprotein VAA049_RS15220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VAA049_RS15225 PF01817 Chorismate mutase type II VAA049_RS15225 PF00800 Prephenate dehydratase VAA049_RS15230 PF13416 Bacterial extracellular solute-binding protein VAA049_RS15235 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS15235 PF00563 EAL domain VAA049_RS15240 PF01931 Protein of unknown function DUF84 VAA049_RS15245 PF01371 Trp repressor protein VAA049_RS15250 PF14718 Soluble lytic murein transglycosylase L domain VAA049_RS15250 PF01464 Transglycosylase SLT domain VAA049_RS15255 PF00005 ABC transporter VAA049_RS15255 PF12848 ABC transporter VAA049_RS15260 PF07238 PilZ domain VAA049_RS15265 PF01817 Chorismate mutase type II VAA049_RS15265 PF02153 Prephenate dehydrogenase VAA049_RS15270 PF00793 DAHP synthetase I family VAA049_RS15275 PF06580 Histidine kinase VAA049_RS15275 PF07694 5TMR of 5TMR-LYT VAA049_RS15280 PF04397 LytTr DNA-binding domain VAA049_RS15280 PF00072 Response regulator receiver domain VAA049_RS15285 PF00933 Glycosyl hydrolase family 3 N terminal domain VAA049_RS15290 PF03702 Anhydro-N-acetylmuramic acid kinase VAA049_RS15295 PF13580 SIS domain VAA049_RS15310 PF02554 Carbon starvation protein CstA VAA049_RS15315 PF02401 LytB protein VAA049_RS15320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA049_RS15325 PF01252 Signal peptidase (SPase) II VAA049_RS15330 PF00133 tRNA synthetases class I (I, L, M and V) VAA049_RS15330 PF08264 Anticodon-binding domain of tRNA VAA049_RS15330 PF06827 Zinc finger found in FPG and IleRS VAA049_RS15335 PF06574 FAD synthetase VAA049_RS15335 PF01687 Riboflavin kinase VAA049_RS15340 PF03023 Lipid II flippase MurJ VAA049_RS15345 PF01649 Ribosomal protein S20 VAA049_RS15350 PF01022 Bacterial regulatory protein, arsR family VAA049_RS15355 PF03466 LysR substrate binding domain VAA049_RS15355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS15360 PF02690 Na+/Pi-cotransporter VAA049_RS15365 PF00303 Thymidylate synthase VAA049_RS15370 PF01790 Prolipoprotein diacylglyceryl transferase VAA049_RS15375 PF01925 Sulfite exporter TauE/SafE VAA049_RS15380 PF05524 PEP-utilising enzyme, N-terminal VAA049_RS15380 PF00391 PEP-utilising enzyme, mobile domain VAA049_RS15380 PF02896 PEP-utilising enzyme, TIM barrel domain VAA049_RS15380 PF01590 GAF domain VAA049_RS15385 PF00293 NUDIX domain VAA049_RS15395 PF02976 DNA mismatch repair enzyme MutH VAA049_RS15400 PF00248 Aldo/keto reductase family VAA049_RS15410 PF00072 Response regulator receiver domain VAA049_RS15410 PF02954 Bacterial regulatory protein, Fis family VAA049_RS15410 PF00158 Sigma-54 interaction domain VAA049_RS15415 PF01336 OB-fold nucleic acid binding domain VAA049_RS15415 PF00152 tRNA synthetases class II (D, K and N) VAA049_RS15420 PF00472 RF-1 domain VAA049_RS15420 PF03462 PCRF domain VAA049_RS15425 PF05525 Branched-chain amino acid transport protein VAA049_RS15430 PF05175 Methyltransferase small domain VAA049_RS15435 PF00271 Helicase conserved C-terminal domain VAA049_RS15435 PF00270 DEAD/DEAH box helicase VAA049_RS15440 PF00009 Elongation factor Tu GTP binding domain VAA049_RS15440 PF03144 Elongation factor Tu domain 2 VAA049_RS15440 PF16658 Class II release factor RF3, C-terminal domain VAA049_RS15445 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS15445 PF00563 EAL domain VAA049_RS15445 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS15460 PF13508 Acetyltransferase (GNAT) domain VAA049_RS15465 PF02036 SCP-2 sterol transfer family VAA049_RS15470 PF00563 EAL domain VAA049_RS15470 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS15470 PF03707 Bacterial signalling protein N terminal repeat VAA049_RS15475 PF01136 Peptidase family U32 VAA049_RS15480 PF01136 Peptidase family U32 VAA049_RS15495 PF02281 Transposase Tn5 dimerisation domain VAA049_RS15495 PF01609 Transposase DDE domain VAA049_RS15495 PF14706 Transposase DNA-binding VAA049_RS15500 PF07719 Tetratricopeptide repeat VAA049_RS15500 PF13181 Tetratricopeptide repeat VAA049_RS15505 PF01138 3' exoribonuclease family, domain 1 VAA049_RS15505 PF00575 S1 RNA binding domain VAA049_RS15505 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VAA049_RS15505 PF00013 KH domain VAA049_RS15505 PF03725 3' exoribonuclease family, domain 2 VAA049_RS15510 PF00312 Ribosomal protein S15 VAA049_RS15515 PF16198 tRNA pseudouridylate synthase B C-terminal domain VAA049_RS15515 PF09157 Pseudouridine synthase II TruB, C-terminal VAA049_RS15515 PF01509 TruB family pseudouridylate synthase (N terminal domain) VAA049_RS15520 PF02033 Ribosome-binding factor A VAA049_RS15525 PF11987 Translation-initiation factor 2 VAA049_RS15525 PF08364 Bacterial translation initiation factor IF-2 associated region VAA049_RS15525 PF04760 Translation initiation factor IF-2, N-terminal region VAA049_RS15525 PF00009 Elongation factor Tu GTP binding domain VAA049_RS15530 PF08529 NusA N-terminal domain VAA049_RS15530 PF00575 S1 RNA binding domain VAA049_RS15530 PF13184 NusA-like KH domain VAA049_RS15535 PF02576 RimP N-terminal domain VAA049_RS15535 PF17384 RimP C-terminal SH3 domain VAA049_RS15550 PF03840 Preprotein translocase SecG subunit VAA049_RS15555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAA049_RS15555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAA049_RS15555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAA049_RS15555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAA049_RS15560 PF00809 Pterin binding enzyme VAA049_RS15565 PF06480 FtsH Extracellular VAA049_RS15565 PF17862 AAA+ lid domain VAA049_RS15565 PF00004 ATPase family associated with various cellular activities (AAA) VAA049_RS15565 PF01434 Peptidase family M41 VAA049_RS15570 PF01728 FtsJ-like methyltransferase VAA049_RS15575 PF01985 CRS1 / YhbY (CRM) domain VAA049_RS15580 PF01272 Transcription elongation factor, GreA/GreB, C-term VAA049_RS15580 PF03449 Transcription elongation factor, N-terminal VAA049_RS15585 PF13609 Gram-negative porin VAA049_RS15590 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VAA049_RS15595 PF00579 tRNA synthetases class I (W and Y) VAA049_RS15595 PF01479 S4 domain VAA049_RS15600 PF01551 Peptidase family M23 VAA049_RS15600 PF04225 Opacity-associated protein A LysM-like domain VAA049_RS15605 PF00873 AcrB/AcrD/AcrF family VAA049_RS15615 PF01521 Iron-sulphur cluster biosynthesis VAA049_RS15620 PF00202 Aminotransferase class-III VAA049_RS15630 PF01594 AI-2E family transporter VAA049_RS15635 PF08468 Methyltransferase small domain N-terminal VAA049_RS15635 PF05175 Methyltransferase small domain VAA049_RS15640 PF00072 Response regulator receiver domain VAA049_RS15640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS15640 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS15640 PF09308 LuxQ, periplasmic VAA049_RS15650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA049_RS15655 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS15660 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS15660 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA049_RS15665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA049_RS15665 PF00005 ABC transporter VAA049_RS15670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA049_RS15670 PF00005 ABC transporter VAA049_RS15680 PF01869 BadF/BadG/BcrA/BcrD ATPase family VAA049_RS15685 PF02838 Glycosyl hydrolase family 20, domain 2 VAA049_RS15685 PF00728 Glycosyl hydrolase family 20, catalytic domain VAA049_RS15690 PF06165 Glycosyltransferase family 36 VAA049_RS15690 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VAA049_RS15695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAA049_RS15695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAA049_RS15695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAA049_RS15695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAA049_RS15700 PF08402 TOBE domain VAA049_RS15700 PF00005 ABC transporter VAA049_RS15710 PF13416 Bacterial extracellular solute-binding protein VAA049_RS15715 PF00909 Ammonium Transporter Family VAA049_RS15720 PF00543 Nitrogen regulatory protein P-II VAA049_RS15725 PF06062 Uncharacterised protein family (UPF0231) VAA049_RS15730 PF11791 Aconitate B N-terminal domain VAA049_RS15730 PF06434 Aconitate hydratase 2 N-terminus VAA049_RS15730 PF00330 Aconitase family (aconitate hydratase) VAA049_RS15735 PF01734 Patatin-like phospholipase VAA049_RS15740 PF00912 Transglycosylase VAA049_RS15740 PF00905 Penicillin binding protein transpeptidase domain VAA049_RS15740 PF14814 Bifunctional transglycosylase second domain VAA049_RS15745 PF08482 ATP-dependent helicase C-terminal VAA049_RS15745 PF00270 DEAD/DEAH box helicase VAA049_RS15745 PF04408 Helicase associated domain (HA2) VAA049_RS15745 PF00271 Helicase conserved C-terminal domain VAA049_RS15755 PF17746 SfsA N-terminal OB domain VAA049_RS15755 PF03749 Sugar fermentation stimulation protein RE domain VAA049_RS15760 PF01258 Prokaryotic dksA/traR C4-type zinc finger VAA049_RS15765 PF00749 tRNA synthetases class I (E and Q), catalytic domain VAA049_RS15770 PF12626 Polymerase A arginine-rich C-terminus VAA049_RS15770 PF12627 Probable RNA and SrmB- binding site of polymerase A VAA049_RS15770 PF01743 Poly A polymerase head domain VAA049_RS15775 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VAA049_RS15780 PF02548 Ketopantoate hydroxymethyltransferase VAA049_RS15785 PF02569 Pantoate-beta-alanine ligase VAA049_RS15790 PF01061 ABC-2 type transporter VAA049_RS15795 PF00005 ABC transporter VAA049_RS15800 PF01740 STAS domain VAA049_RS15800 PF00916 Sulfate permease family VAA049_RS15805 PF00484 Carbonic anhydrase VAA049_RS15810 PF00156 Phosphoribosyl transferase domain VAA049_RS15815 PF00440 Bacterial regulatory proteins, tetR family VAA049_RS15820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VAA049_RS15825 PF04348 LppC putative lipoprotein VAA049_RS15830 PF02021 Uncharacterised protein family UPF0102 VAA049_RS15835 PF13580 SIS domain VAA049_RS15840 PF04972 BON domain VAA049_RS15845 PF04386 Stringent starvation protein B VAA049_RS15850 PF02798 Glutathione S-transferase, N-terminal domain VAA049_RS15850 PF00043 Glutathione S-transferase, C-terminal domain VAA049_RS15855 PF02167 Cytochrome C1 family VAA049_RS15860 PF00033 Cytochrome b/b6/petB VAA049_RS15860 PF00032 Cytochrome b(C-terminal)/b6/petD VAA049_RS15865 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VAA049_RS15865 PF00355 Rieske [2Fe-2S] domain VAA049_RS15870 PF00380 Ribosomal protein S9/S16 VAA049_RS15875 PF00572 Ribosomal protein L13 VAA049_RS15885 PF03969 AFG1-like ATPase VAA049_RS15895 PF00595 PDZ domain VAA049_RS15900 PF13180 PDZ domain VAA049_RS15905 PF01245 Ribosomal protein L19 VAA049_RS15910 PF01746 tRNA (Guanine-1)-methyltransferase VAA049_RS15915 PF01782 RimM N-terminal domain VAA049_RS15915 PF05239 PRC-barrel domain VAA049_RS15920 PF00886 Ribosomal protein S16 VAA049_RS15925 PF02978 Signal peptide binding domain VAA049_RS15925 PF00448 SRP54-type protein, GTPase domain VAA049_RS15925 PF02881 SRP54-type protein, helical bundle domain VAA049_RS15930 PF01578 Cytochrome C assembly protein VAA049_RS15935 PF01595 Cyclin M transmembrane N-terminal domain VAA049_RS15935 PF00571 CBS domain VAA049_RS15935 PF03471 Transporter associated domain VAA049_RS15940 PF02664 S-Ribosylhomocysteinase (LuxS) VAA049_RS15945 PF04262 Glutamate-cysteine ligase VAA049_RS15950 PF05193 Peptidase M16 inactive domain VAA049_RS15950 PF00675 Insulinase (Peptidase family M16) VAA049_RS15955 PF09335 SNARE associated Golgi protein VAA049_RS15960 PF08240 Alcohol dehydrogenase GroES-like domain VAA049_RS15960 PF00107 Zinc-binding dehydrogenase VAA049_RS15965 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VAA049_RS15970 PF02436 Conserved carboxylase domain VAA049_RS15970 PF00682 HMGL-like VAA049_RS15970 PF00364 Biotin-requiring enzyme VAA049_RS15975 PF04277 Oxaloacetate decarboxylase, gamma chain VAA049_RS16025 PF02599 Global regulator protein family VAA049_RS16030 PF01842 ACT domain VAA049_RS16030 PF13840 ACT domain VAA049_RS16030 PF00696 Amino acid kinase family VAA049_RS16035 PF01411 tRNA synthetases class II (A) VAA049_RS16035 PF02272 DHHA1 domain VAA049_RS16035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VAA049_RS16040 PF02631 RecX family VAA049_RS16045 PF00154 recA bacterial DNA recombination protein VAA049_RS16050 PF02464 Competence-damaged protein VAA049_RS16055 PF00005 ABC transporter VAA049_RS16055 PF12857 TOBE-like domain VAA049_RS16060 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS16075 PF00291 Pyridoxal-phosphate dependent enzyme VAA049_RS16080 PF05192 MutS domain III VAA049_RS16080 PF05188 MutS domain II VAA049_RS16080 PF01624 MutS domain I VAA049_RS16080 PF00488 MutS domain V VAA049_RS16080 PF05190 MutS family domain IV VAA049_RS16085 PF04545 Sigma-70, region 4 VAA049_RS16085 PF00140 Sigma-70 factor, region 1.2 VAA049_RS16085 PF04539 Sigma-70 region 3 VAA049_RS16085 PF04542 Sigma-70 region 2 VAA049_RS16090 PF01551 Peptidase family M23 VAA049_RS16090 PF01476 LysM domain VAA049_RS16100 PF01975 Survival protein SurE VAA049_RS16105 PF01142 tRNA pseudouridine synthase D (TruD) VAA049_RS16110 PF02542 YgbB family VAA049_RS16115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VAA049_RS16120 PF04977 Septum formation initiator VAA049_RS16125 PF02673 Bacitracin resistance protein BacA VAA049_RS16130 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VAA049_RS16135 PF02152 Dihydroneopterin aldolase VAA049_RS16140 PF02660 Glycerol-3-phosphate acyltransferase VAA049_RS16145 PF00561 alpha/beta hydrolase fold VAA049_RS16150 PF00814 Glycoprotease family VAA049_RS16155 PF01165 Ribosomal protein S21 VAA049_RS16160 PF09424 Yqey-like protein VAA049_RS16165 PF08275 DNA primase catalytic core, N-terminal domain VAA049_RS16165 PF01807 CHC2 zinc finger VAA049_RS16165 PF10410 DnaB-helicase binding domain of primase VAA049_RS16165 PF08278 DNA primase DnaG DnaB-binding VAA049_RS16170 PF00140 Sigma-70 factor, region 1.2 VAA049_RS16170 PF04546 Sigma-70, non-essential region VAA049_RS16170 PF04542 Sigma-70 region 2 VAA049_RS16170 PF04539 Sigma-70 region 3 VAA049_RS16170 PF04545 Sigma-70, region 4 VAA049_RS16170 PF03979 Sigma-70 factor, region 1.1 VAA049_RS16185 PF03480 Bacterial extracellular solute-binding protein, family 7 VAA049_RS16190 PF01380 SIS domain VAA049_RS16195 PF08220 DeoR-like helix-turn-helix domain VAA049_RS16195 PF00455 DeoR C terminal sensor domain VAA049_RS16200 PF02887 Pyruvate kinase, alpha/beta domain VAA049_RS16200 PF00224 Pyruvate kinase, barrel domain VAA049_RS16205 PF04402 Protein of unknown function (DUF541) VAA049_RS16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS16210 PF03466 LysR substrate binding domain VAA049_RS16215 PF01810 LysE type translocator VAA049_RS16220 PF00924 Mechanosensitive ion channel VAA049_RS16220 PF05552 Conserved TM helix VAA049_RS16230 PF01116 Fructose-bisphosphate aldolase class-II VAA049_RS16235 PF00162 Phosphoglycerate kinase VAA049_RS16240 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VAA049_RS16240 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VAA049_RS16245 PF07715 TonB-dependent Receptor Plug Domain VAA049_RS16245 PF00593 TonB dependent receptor VAA049_RS16250 PF03466 LysR substrate binding domain VAA049_RS16250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS16255 PF00456 Transketolase, thiamine diphosphate binding domain VAA049_RS16255 PF02780 Transketolase, C-terminal domain VAA049_RS16255 PF02779 Transketolase, pyrimidine binding domain VAA049_RS16265 PF02773 S-adenosylmethionine synthetase, C-terminal domain VAA049_RS16265 PF02772 S-adenosylmethionine synthetase, central domain VAA049_RS16265 PF00438 S-adenosylmethionine synthetase, N-terminal domain VAA049_RS16270 PF17283 SprT-like zinc ribbon domain VAA049_RS16270 PF10263 SprT-like family VAA049_RS16275 PF04231 Endonuclease I VAA049_RS16280 PF04452 RNA methyltransferase VAA049_RS16285 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VAA049_RS16285 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VAA049_RS16290 PF02622 Uncharacterized ACR, COG1678 VAA049_RS16295 PF03652 Holliday junction resolvase VAA049_RS16300 PF00579 tRNA synthetases class I (W and Y) VAA049_RS16300 PF01479 S4 domain VAA049_RS16310 PF00437 Type II/IV secretion system protein VAA049_RS16315 PF00437 Type II/IV secretion system protein VAA049_RS16320 PF01168 Alanine racemase, N-terminal domain VAA049_RS16325 PF14748 Pyrroline-5-carboxylate reductase dimerisation VAA049_RS16325 PF03807 NADP oxidoreductase coenzyme F420-dependent VAA049_RS16330 PF02325 YGGT family VAA049_RS16335 PF02594 Uncharacterised ACR, YggU family COG1872 VAA049_RS16345 PF01725 Ham1 family VAA049_RS16350 PF04055 Radical SAM superfamily VAA049_RS16350 PF06969 HemN C-terminal domain VAA049_RS16355 PF04960 Glutaminase VAA049_RS16360 PF02390 Putative methyltransferase VAA049_RS16365 PF00633 Helix-hairpin-helix motif VAA049_RS16365 PF10576 Iron-sulfur binding domain of endonuclease III VAA049_RS16365 PF00730 HhH-GPD superfamily base excision DNA repair protein VAA049_RS16365 PF14815 NUDIX domain VAA049_RS16370 PF04362 Bacterial Fe(2+) trafficking VAA049_RS16375 PF01464 Transglycosylase SLT domain VAA049_RS16375 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VAA049_RS16400 PF12729 Four helix bundle sensory module for signal transduction VAA049_RS16400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS16400 PF00672 HAMP domain VAA049_RS16430 PF05099 Tellurite resistance protein TerB VAA049_RS16430 PF00226 DnaJ domain VAA049_RS16435 PF04453 LPS transport system D VAA049_RS16435 PF03968 OstA-like protein VAA049_RS16440 PF09312 SurA N-terminal domain VAA049_RS16445 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VAA049_RS16450 PF00398 Ribosomal RNA adenine dimethylase VAA049_RS16455 PF04379 ApaG domain VAA049_RS16460 PF00149 Calcineurin-like phosphoesterase VAA049_RS16465 PF00186 Dihydrofolate reductase VAA049_RS16470 PF12821 Threonine/Serine exporter, ThrE VAA049_RS16475 PF06738 Putative threonine/serine exporter VAA049_RS16480 PF01926 50S ribosome-binding GTPase VAA049_RS16480 PF01018 GTP1/OBG VAA049_RS16485 PF01016 Ribosomal L27 protein VAA049_RS16490 PF00829 Ribosomal prokaryotic L21 protein VAA049_RS16495 PF00348 Polyprenyl synthetase VAA049_RS16500 PF13520 Amino acid permease VAA049_RS16505 PF00056 lactate/malate dehydrogenase, NAD binding domain VAA049_RS16505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VAA049_RS16510 PF01316 Arginine repressor, DNA binding domain VAA049_RS16510 PF02863 Arginine repressor, C-terminal domain VAA049_RS16515 PF16868 NMT1-like family VAA049_RS16525 PF00582 Universal stress protein family VAA049_RS16540 PF06877 Regulator of ribonuclease activity B VAA049_RS16550 PF01523 Putative modulator of DNA gyrase VAA049_RS16555 PF00795 Carbon-nitrogen hydrolase VAA049_RS16560 PF13116 Protein of unknown function VAA049_RS16560 PF13502 AsmA-like C-terminal region VAA049_RS16565 PF10150 Ribonuclease E/G family VAA049_RS16565 PF00575 S1 RNA binding domain VAA049_RS16570 PF02545 Maf-like protein VAA049_RS16575 PF04093 rod shape-determining protein MreD VAA049_RS16580 PF04085 rod shape-determining protein MreC VAA049_RS16615 PF07963 Prokaryotic N-terminal methylation motif VAA049_RS16620 PF07963 Prokaryotic N-terminal methylation motif VAA049_RS16630 PF00482 Type II secretion system (T2SS), protein F VAA049_RS16645 PF13401 AAA domain VAA049_RS16645 PF01471 Putative peptidoglycan binding domain VAA049_RS16650 PF00263 Bacterial type II and III secretion system protein VAA049_RS16650 PF03958 Bacterial type II/III secretion system short domain VAA049_RS16650 PF11741 AMIN domain VAA049_RS16650 PF07660 Secretin and TonB N terminus short domain VAA049_RS16670 PF00990 Diguanylate cyclase, GGDEF domain VAA049_RS16670 PF17157 Gammaproteobacterial periplasmic sensor domain VAA049_RS16670 PF00563 EAL domain VAA049_RS16675 PF00436 Single-strand binding protein family VAA049_RS16680 PF00196 Bacterial regulatory proteins, luxR family VAA049_RS16685 PF00483 Nucleotidyl transferase VAA049_RS16690 PF17755 UvrA DNA-binding domain VAA049_RS16690 PF00005 ABC transporter VAA049_RS16690 PF17760 UvrA interaction domain VAA049_RS16700 PF00266 Aminotransferase class-V VAA049_RS16705 PF01842 ACT domain VAA049_RS16705 PF00696 Amino acid kinase family VAA049_RS16710 PF01797 Transposase IS200 like VAA049_RS16715 PF00809 Pterin binding enzyme VAA049_RS16715 PF02965 Vitamin B12 dependent methionine synthase, activation domain VAA049_RS16715 PF02607 B12 binding domain VAA049_RS16715 PF02574 Homocysteine S-methyltransferase VAA049_RS16715 PF02310 B12 binding domain VAA049_RS16720 PF00999 Sodium/hydrogen exchanger family VAA049_RS16790 PF01507 Phosphoadenosine phosphosulfate reductase family VAA049_RS16795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VAA049_RS16795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VAA049_RS16800 PF00175 Oxidoreductase NAD-binding domain VAA049_RS16800 PF00667 FAD binding domain VAA049_RS16800 PF00258 Flavodoxin VAA049_RS16820 PF09583 Phage shock protein G (Phageshock_PspG) VAA049_RS16825 PF01207 Dihydrouridine synthase (Dus) VAA049_RS16830 PF01475 Ferric uptake regulator family VAA049_RS16840 PF12706 Beta-lactamase superfamily domain VAA049_RS16845 PF00342 Phosphoglucose isomerase VAA049_RS16850 PF01894 Uncharacterised protein family UPF0047 VAA049_RS16855 PF00842 Alanine racemase, C-terminal domain VAA049_RS16855 PF01168 Alanine racemase, N-terminal domain VAA049_RS16860 PF00772 DnaB-like helicase N terminal domain VAA049_RS16860 PF03796 DnaB-like helicase C terminal domain VAA049_RS16870 PF03948 Ribosomal protein L9, C-terminal domain VAA049_RS16870 PF01281 Ribosomal protein L9, N-terminal domain VAA049_RS16875 PF01084 Ribosomal protein S18 VAA049_RS16880 PF00436 Single-strand binding protein family VAA049_RS16885 PF01250 Ribosomal protein S6 VAA049_RS16890 PF00210 Ferritin-like domain VAA049_RS16895 PF04324 BFD-like [2Fe-2S] binding domain VAA049_RS16900 PF03144 Elongation factor Tu domain 2 VAA049_RS16900 PF00009 Elongation factor Tu GTP binding domain VAA049_RS16900 PF03143 Elongation factor Tu C-terminal domain VAA049_RS16905 PF03144 Elongation factor Tu domain 2 VAA049_RS16905 PF00009 Elongation factor Tu GTP binding domain VAA049_RS16905 PF00679 Elongation factor G C-terminus VAA049_RS16905 PF14492 Elongation Factor G, domain II VAA049_RS16905 PF03764 Elongation factor G, domain IV VAA049_RS16910 PF00177 Ribosomal protein S7p/S5e VAA049_RS16915 PF00164 Ribosomal protein S12/S23 VAA049_RS16925 PF02635 DsrE/DsrF-like family VAA049_RS16930 PF02635 DsrE/DsrF-like family VAA049_RS16935 PF13309 HTH domain VAA049_RS16935 PF08348 YheO-like PAS domain VAA049_RS16940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VAA049_RS16940 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VAA049_RS16950 PF04102 SlyX VAA049_RS16955 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VAA049_RS16960 PF01145 SPFH domain / Band 7 family VAA049_RS16965 PF12221 Bacterial membrane protein N terminal VAA049_RS16965 PF01145 SPFH domain / Band 7 family VAA049_RS16970 PF13167 GTP-binding GTPase N-terminal VAA049_RS16970 PF16360 GTP-binding GTPase Middle Region VAA049_RS16970 PF01926 50S ribosome-binding GTPase VAA049_RS16975 PF17209 Hfq protein VAA049_RS16985 PF01119 DNA mismatch repair protein, C-terminal domain VAA049_RS16985 PF08676 MutL C terminal dimerisation domain VAA049_RS16990 PF01520 N-acetylmuramoyl-L-alanine amidase VAA049_RS16995 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VAA049_RS17000 PF08331 Domain of unknown function (DUF1730) VAA049_RS17050 PF00929 Exonuclease VAA049_RS17055 PF03193 RsgA GTPase VAA049_RS17060 PF02666 Phosphatidylserine decarboxylase VAA049_RS17065 PF00939 Sodium:sulfate symporter transmembrane region VAA049_RS17075 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VAA049_RS17075 PF01676 Metalloenzyme superfamily VAA049_RS17080 PF01551 Peptidase family M23 VAA049_RS17090 PF08360 QacR-like protein, C-terminal region VAA049_RS17090 PF00440 Bacterial regulatory proteins, tetR family VAA049_RS17095 PF01208 Uroporphyrinogen decarboxylase (URO-D) VAA049_RS17100 PF09297 NADH pyrophosphatase zinc ribbon domain VAA049_RS17100 PF00293 NUDIX domain VAA049_RS17105 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VAA049_RS17110 PF04997 RNA polymerase Rpb1, domain 1 VAA049_RS17110 PF04983 RNA polymerase Rpb1, domain 3 VAA049_RS17110 PF00623 RNA polymerase Rpb1, domain 2 VAA049_RS17110 PF04998 RNA polymerase Rpb1, domain 5 VAA049_RS17110 PF05000 RNA polymerase Rpb1, domain 4 VAA049_RS17115 PF04565 RNA polymerase Rpb2, domain 3 VAA049_RS17115 PF04561 RNA polymerase Rpb2, domain 2 VAA049_RS17115 PF04560 RNA polymerase Rpb2, domain 7 VAA049_RS17115 PF04563 RNA polymerase beta subunit VAA049_RS17115 PF00562 RNA polymerase Rpb2, domain 6 VAA049_RS17115 PF10385 RNA polymerase beta subunit external 1 domain VAA049_RS17120 PF00542 Ribosomal protein L7/L12 C-terminal domain VAA049_RS17120 PF16320 Ribosomal protein L7/L12 dimerisation domain VAA049_RS17125 PF00466 Ribosomal protein L10 VAA049_RS17130 PF00687 Ribosomal protein L1p/L10e family VAA049_RS17135 PF00298 Ribosomal protein L11, RNA binding domain VAA049_RS17135 PF03946 Ribosomal protein L11, N-terminal domain VAA049_RS17140 PF02357 Transcription termination factor nusG VAA049_RS17140 PF00467 KOW motif VAA049_RS17145 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VAA049_RS17150 PF03143 Elongation factor Tu C-terminal domain VAA049_RS17150 PF00009 Elongation factor Tu GTP binding domain VAA049_RS17150 PF03144 Elongation factor Tu domain 2 VAA049_RS17175 PF00485 Phosphoribulokinase / Uridine kinase family VAA049_RS17180 PF02237 Biotin protein ligase C terminal domain VAA049_RS17180 PF08279 HTH domain VAA049_RS17180 PF03099 Biotin/lipoate A/B protein ligase family VAA049_RS17185 PF01565 FAD binding domain VAA049_RS17185 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VAA049_RS17200 PF13091 PLD-like domain VAA049_RS17235 PF00175 Oxidoreductase NAD-binding domain VAA049_RS17240 PF00111 2Fe-2S iron-sulfur cluster binding domain VAA049_RS17240 PF00175 Oxidoreductase NAD-binding domain VAA049_RS17240 PF00970 Oxidoreductase FAD-binding domain VAA049_RS17245 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VAA049_RS17255 PF07498 Rho termination factor, N-terminal domain VAA049_RS17255 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAA049_RS17255 PF07497 Rho termination factor, RNA-binding domain VAA049_RS17260 PF00085 Thioredoxin VAA049_RS17265 PF00270 DEAD/DEAH box helicase VAA049_RS17265 PF00271 Helicase conserved C-terminal domain VAA049_RS17270 PF02541 Ppx/GppA phosphatase family VAA049_RS17275 PF00072 Response regulator receiver domain VAA049_RS17275 PF09456 RcsC Alpha-Beta-Loop (ABL) VAA049_RS17275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VAA049_RS17275 PF00512 His Kinase A (phospho-acceptor) domain VAA049_RS17280 PF12832 MFS_1 like family VAA049_RS17300 PF00501 AMP-binding enzyme VAA049_RS17300 PF16177 Acetyl-coenzyme A synthetase N-terminus VAA049_RS17300 PF13193 AMP-binding enzyme C-terminal domain VAA049_RS17305 PF01220 Dehydroquinase class II VAA049_RS17310 PF00364 Biotin-requiring enzyme VAA049_RS17315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VAA049_RS17315 PF00289 Biotin carboxylase, N-terminal domain VAA049_RS17315 PF02785 Biotin carboxylase C-terminal domain VAA049_RS17325 PF01207 Dihydrouridine synthase (Dus) VAA049_RS17330 PF02954 Bacterial regulatory protein, Fis family VAA049_RS17335 PF02661 Fic/DOC family VAA049_RS17335 PF13784 Fic/DOC family N-terminal VAA049_RS17340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VAA049_RS17340 PF00356 Bacterial regulatory proteins, lacI family VAA049_RS17345 PF00920 Dehydratase family VAA049_RS17350 PF01202 Shikimate kinase VAA049_RS17355 PF02447 GntP family permease VAA049_RS17360 PF01081 KDPG and KHG aldolase VAA049_RS17365 PF07715 TonB-dependent Receptor Plug Domain VAA049_RS17365 PF00593 TonB dependent receptor VAA049_RS17375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS17375 PF17200 Single Cache domain 2 VAA049_RS17375 PF00672 HAMP domain VAA049_RS17380 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VAA049_RS17380 PF01276 Orn/Lys/Arg decarboxylase, major domain VAA049_RS17380 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VAA049_RS17385 PF13520 Amino acid permease VAA049_RS17390 PF18500 CadC C-terminal domain 1 VAA049_RS17390 PF00486 Transcriptional regulatory protein, C terminal VAA049_RS17395 PF13411 MerR HTH family regulatory protein VAA049_RS17405 PF01808 AICARFT/IMPCHase bienzyme VAA049_RS17405 PF02142 MGS-like domain VAA049_RS17410 PF02843 Phosphoribosylglycinamide synthetase, C domain VAA049_RS17410 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VAA049_RS17410 PF02844 Phosphoribosylglycinamide synthetase, N domain VAA049_RS17420 PF00216 Bacterial DNA-binding protein VAA049_RS17430 PF00571 CBS domain VAA049_RS17430 PF01595 Cyclin M transmembrane N-terminal domain VAA049_RS17435 PF00480 ROK family VAA049_RS17440 PF01238 Phosphomannose isomerase type I VAA049_RS17445 PF04222 Protein of unknown function (DUF416) VAA049_RS17450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VAA049_RS17455 PF03167 Uracil DNA glycosylase superfamily VAA049_RS17460 PF00924 Mechanosensitive ion channel VAA049_RS17475 PF10996 Beta-Casp domain VAA049_RS17475 PF00753 Metallo-beta-lactamase superfamily VAA049_RS17475 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VAA049_RS17480 PF02397 Bacterial sugar transferase VAA049_RS17485 PF01370 NAD dependent epimerase/dehydratase family VAA049_RS17490 PF02719 Polysaccharide biosynthesis protein VAA049_RS17505 PF01370 NAD dependent epimerase/dehydratase family VAA049_RS17510 PF16363 GDP-mannose 4,6 dehydratase VAA049_RS17520 PF00535 Glycosyl transferase family 2 VAA049_RS17525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VAA049_RS17530 PF03559 NDP-hexose 2,3-dehydratase VAA049_RS17535 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VAA049_RS17540 PF00501 AMP-binding enzyme VAA049_RS17540 PF13193 AMP-binding enzyme C-terminal domain VAA049_RS17545 PF00106 short chain dehydrogenase VAA049_RS17565 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VAA049_RS17565 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VAA049_RS17575 PF00483 Nucleotidyl transferase VAA049_RS17580 PF16363 GDP-mannose 4,6 dehydratase VAA049_RS17590 PF00534 Glycosyl transferases group 1 VAA049_RS17590 PF13439 Glycosyltransferase Family 4 VAA049_RS17600 PF00005 ABC transporter VAA049_RS17600 PF14524 Wzt C-terminal domain VAA049_RS17610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VAA049_RS17610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VAA049_RS17610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VAA049_RS17610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VAA049_RS17615 PF00483 Nucleotidyl transferase VAA049_RS17615 PF01050 Mannose-6-phosphate isomerase VAA049_RS17620 PF01370 NAD dependent epimerase/dehydratase family VAA049_RS17625 PF00457 Glycosyl hydrolases family 11 VAA049_RS17625 PF01522 Polysaccharide deacetylase VAA049_RS17640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAA049_RS17650 PF04488 Glycosyltransferase sugar-binding region containing DXD motif VAA049_RS17655 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VAA049_RS17690 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAA049_RS17695 PF00535 Glycosyl transferase family 2 VAA049_RS17700 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VAA049_RS17705 PF01467 Cytidylyltransferase-like VAA049_RS17710 PF06827 Zinc finger found in FPG and IleRS VAA049_RS17710 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VAA049_RS17710 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VAA049_RS17720 PF00471 Ribosomal protein L33 VAA049_RS17725 PF00830 Ribosomal L28 family VAA049_RS17730 PF04002 RadC-like JAB domain VAA049_RS17735 PF02743 Cache domain VAA049_RS17735 PF00672 HAMP domain VAA049_RS17735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VAA049_RS17740 PF04127 DNA / pantothenate metabolism flavoprotein VAA049_RS17740 PF02441 Flavoprotein VAA049_RS17745 PF00440 Bacterial regulatory proteins, tetR family VAA049_RS17750 PF03279 Bacterial lipid A biosynthesis acyltransferase VAA049_RS17755 PF03279 Bacterial lipid A biosynthesis acyltransferase VAA049_RS17760 PF00156 Phosphoribosyl transferase domain VAA049_RS17765 PF03725 3' exoribonuclease family, domain 2 VAA049_RS17765 PF01138 3' exoribonuclease family, domain 1 VAA049_RS17770 PF03755 YicC-like family, N-terminal region VAA049_RS17770 PF08340 Domain of unknown function (DUF1732) VAA049_RS17775 PF03350 Uncharacterized protein family, UPF0114 VAA049_RS17780 PF02378 Phosphotransferase system, EIIC VAA049_RS17780 PF00367 phosphotransferase system, EIIB VAA049_RS17785 PF13580 SIS domain VAA049_RS17795 PF01380 SIS domain VAA049_RS17795 PF01418 Helix-turn-helix domain, rpiR family VAA049_RS17800 PF01032 FecCD transport family VAA049_RS17805 PF01497 Periplasmic binding protein VAA049_RS17810 PF00005 ABC transporter VAA049_RS17815 PF00593 TonB dependent receptor VAA049_RS17815 PF07715 TonB-dependent Receptor Plug Domain VAA049_RS17820 PF00664 ABC transporter transmembrane region VAA049_RS17820 PF00005 ABC transporter VAA049_RS17835 PF16124 RecQ zinc-binding VAA049_RS17835 PF00570 HRDC domain VAA049_RS17835 PF00271 Helicase conserved C-terminal domain VAA049_RS17835 PF00270 DEAD/DEAH box helicase VAA049_RS17835 PF09382 RQC domain VAA049_RS17840 PF00892 EamA-like transporter family VAA049_RS17850 PF12833 Helix-turn-helix domain VAA049_RS17855 PF01810 LysE type translocator VAA049_RS17860 PF13361 UvrD-like helicase C-terminal domain VAA049_RS17860 PF00580 UvrD/REP helicase N-terminal domain VAA049_RS17865 PF01432 Peptidase family M3 VAA049_RS17870 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VAA049_RS17875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VAA049_RS17875 PF07992 Pyridine nucleotide-disulphide oxidoreductase VAA049_RS17885 PF12911 N-terminal TM domain of oligopeptide transport permease C VAA049_RS17885 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS17890 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS17895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VAA049_RS17900 PF00005 ABC transporter VAA049_RS17900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VAA049_RS17940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VAA049_RS17945 PF13361 UvrD-like helicase C-terminal domain VAA049_RS17945 PF00580 UvrD/REP helicase N-terminal domain VAA049_RS17950 PF00440 Bacterial regulatory proteins, tetR family VAA049_RS17955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VAA049_RS17960 PF00873 AcrB/AcrD/AcrF family VAA049_RS17965 PF04380 Membrane fusogenic activity VAA049_RS17970 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VAA049_RS17970 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VAA049_RS17975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS17975 PF03466 LysR substrate binding domain VAA049_RS18045 PF12724 Flavodoxin domain VAA049_RS18050 PF02386 Cation transport protein VAA049_RS18055 PF01205 Uncharacterized protein family UPF0029 VAA049_RS18055 PF09186 Domain of unknown function (DUF1949) VAA049_RS18060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VAA049_RS18060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VAA049_RS18060 PF00378 Enoyl-CoA hydratase/isomerase VAA049_RS18065 PF02803 Thiolase, C-terminal domain VAA049_RS18065 PF00108 Thiolase, N-terminal domain VAA049_RS18070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VAA049_RS18070 PF03466 LysR substrate binding domain VAA049_RS18075 PF07690 Major Facilitator Superfamily VAA049_RS18080 PF12804 MobA-like NTP transferase domain VAA049_RS18080 PF00132 Bacterial transferase hexapeptide (six repeats) VAA049_RS18085 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VAA049_RS18085 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VAA049_RS18090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAA049_RS18090 PF02874 ATP synthase alpha/beta family, beta-barrel domain VAA049_RS18095 PF00231 ATP synthase VAA049_RS18100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VAA049_RS18100 PF02874 ATP synthase alpha/beta family, beta-barrel domain VAA049_RS18100 PF00306 ATP synthase alpha/beta chain, C terminal domain VAA049_RS18105 PF00213 ATP synthase delta (OSCP) subunit VAA049_RS18110 PF00430 ATP synthase B/B' CF(0) VAA049_RS18115 PF00137 ATP synthase subunit C VAA049_RS18120 PF00119 ATP synthase A chain VAA049_RS18125 PF03899 ATP synthase I chain VAA049_RS18130 PF17762 HTH domain found in ParB protein VAA049_RS18130 PF02195 ParB-like nuclease domain VAA049_RS18135 PF13614 AAA domain VAA049_RS18140 PF02527 rRNA small subunit methyltransferase G VAA049_RS18145 PF13932 GidA associated domain VAA049_RS18145 PF01134 Glucose inhibited division protein A VAA049_RS18155 PF00258 Flavodoxin VAA049_RS18160 PF01926 50S ribosome-binding GTPase VAA049_RS18160 PF12631 MnmE helical domain VAA049_RS18160 PF10396 GTP-binding protein TrmE N-terminus VAA049_RS18165 PF14849 YidC periplasmic domain VAA049_RS18165 PF02096 60Kd inner membrane protein VAA049_RS18170 PF01809 Putative membrane protein insertion efficiency factor VAA049_RS18175 PF00825 Ribonuclease P VAA049_RS18180 PF00468 Ribosomal protein L34 VAA049_RS18185 PF00005 ABC transporter VAA049_RS18190 PF00528 Binding-protein-dependent transport system inner membrane component VAA049_RS18195 PF00497 Bacterial extracellular solute-binding proteins, family 3 VAA049_RS18215 PF09669 Phage regulatory protein Rha (Phage_pRha) VAA049_RS18215 PF10549 ORF11CD3 domain