NH62_RS00015 SM00100 Cyclic nucleotide-monophosphate binding domain NH62_RS00030 SM00354 helix_turn _helix lactose operon repressor NH62_RS00050 SM00382 ATPases associated with a variety of cellular activities NH62_RS00105 SM00382 ATPases associated with a variety of cellular activities NH62_RS00110 SM00382 ATPases associated with a variety of cellular activities NH62_RS00110 SM01086 C-terminal, D2-small domain, of ClpB protein NH62_RS00185 SM00052 Putative diguanylate phosphodiesterase NH62_RS00190 SM00450 Rhodanese Homology Domain NH62_RS00270 SM00422 helix_turn_helix, mercury resistance NH62_RS00285 SM00052 Putative diguanylate phosphodiesterase NH62_RS00285 SM00267 diguanylate cyclase NH62_RS00315 SM00267 diguanylate cyclase NH62_RS00320 SM00382 ATPases associated with a variety of cellular activities NH62_RS00340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS00340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS00370 SM00487 DEAD-like helicases superfamily NH62_RS00370 SM00490 helicase superfamily c-terminal domain NH62_RS00385 SM00257 Lysin motif NH62_RS00395 SM00422 helix_turn_helix, mercury resistance NH62_RS00420 SM00028 Tetratricopeptide repeats NH62_RS00425 SM00267 diguanylate cyclase NH62_RS00440 SM00245 tail specific protease NH62_RS00485 SM00014 Acid phosphatase homologues NH62_RS00505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS00505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS00525 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NH62_RS00525 SM00495 Chitin-binding domain type 3 NH62_RS00525 SM00636 NH62_RS00525 NH62_RS00580 SM00642 Alpha-amylase domain NH62_RS00595 SM00421 helix_turn_helix, Lux Regulon NH62_RS00610 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS00610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS00610 SM01049 NH62_RS00610 NH62_RS00650 SM00470 ParB-like nuclease domain NH62_RS00675 SM01236 NH62_RS00675 NH62_RS00680 SM00822 NH62_RS00680 NH62_RS00690 SM00448 cheY-homologous receiver domain NH62_RS00690 SM00862 Transcriptional regulatory protein, C terminal NH62_RS00695 SM00387 Histidine kinase-like ATPases NH62_RS00695 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS00705 SM00382 ATPases associated with a variety of cellular activities NH62_RS00730 SM00448 cheY-homologous receiver domain NH62_RS00735 SM00073 Histidine Phosphotransfer domain NH62_RS00735 SM00260 Two component signalling adaptor domain NH62_RS00735 SM00387 Histidine kinase-like ATPases NH62_RS00735 SM01231 NH62_RS00735 NH62_RS00740 SM00260 Two component signalling adaptor domain NH62_RS00745 SM00260 Two component signalling adaptor domain NH62_RS00750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS00750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS00755 SM00138 Methyltransferase, chemotaxis proteins NH62_RS00765 SM00448 cheY-homologous receiver domain NH62_RS00770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS00780 SM00331 Sigma factor PP2C-like phosphatases NH62_RS00780 SM00448 cheY-homologous receiver domain NH62_RS00790 SM00382 ATPases associated with a variety of cellular activities NH62_RS00795 SM00052 Putative diguanylate phosphodiesterase NH62_RS00795 SM00267 diguanylate cyclase NH62_RS00815 SM00421 helix_turn_helix, Lux Regulon NH62_RS00835 SM00342 helix_turn_helix, arabinose operon control protein NH62_RS00860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS00860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS00865 SM00344 helix_turn_helix ASNC type NH62_RS00910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS00910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS00925 SM00342 helix_turn_helix, arabinose operon control protein NH62_RS00935 SM00450 Rhodanese Homology Domain NH62_RS00940 SM00347 helix_turn_helix multiple antibiotic resistance protein NH62_RS00965 SM00849 Metallo-beta-lactamase superfamily NH62_RS01015 SM00062 Bacterial periplasmic substrate-binding proteins NH62_RS01025 SM00382 ATPases associated with a variety of cellular activities NH62_RS01040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS01040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS01055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS01055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS01065 SM00642 Alpha-amylase domain NH62_RS01080 SM00671 Sel1-like repeats. NH62_RS01095 SM01154 NH62_RS01095 NH62_RS01115 SM00342 helix_turn_helix, arabinose operon control protein NH62_RS01115 SM01009 AlkA N-terminal domain NH62_RS01165 SM00347 helix_turn_helix multiple antibiotic resistance protein NH62_RS01185 SM00342 helix_turn_helix, arabinose operon control protein NH62_RS01210 SM00382 ATPases associated with a variety of cellular activities NH62_RS01235 SM00487 DEAD-like helicases superfamily NH62_RS01235 SM00490 helicase superfamily c-terminal domain NH62_RS01285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS01290 SM00062 Bacterial periplasmic substrate-binding proteins NH62_RS01295 SM00382 ATPases associated with a variety of cellular activities NH62_RS01310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS01310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS01345 SM00267 diguanylate cyclase NH62_RS01370 SM00267 diguanylate cyclase NH62_RS01370 SM01079 NH62_RS01370 NH62_RS01380 SM00530 Helix-turn-helix XRE-family like proteins NH62_RS01390 SM00267 diguanylate cyclase NH62_RS01395 SM00347 helix_turn_helix multiple antibiotic resistance protein NH62_RS01400 SM00260 Two component signalling adaptor domain NH62_RS01400 SM00448 cheY-homologous receiver domain NH62_RS01410 SM00421 helix_turn_helix, Lux Regulon NH62_RS01420 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. NH62_RS01435 SM00382 ATPases associated with a variety of cellular activities NH62_RS01465 SM00420 helix_turn_helix, Deoxyribose operon repressor NH62_RS01465 SM01134 NH62_RS01465 NH62_RS01470 SM00091 PAS domain NH62_RS01470 SM00267 diguanylate cyclase NH62_RS01480 SM00342 helix_turn_helix, arabinose operon control protein NH62_RS01495 SM00357 Cold shock protein domain NH62_RS01500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NH62_RS01525 SM00342 helix_turn_helix, arabinose operon control protein NH62_RS01540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS01540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS01570 SM00382 ATPases associated with a variety of cellular activities NH62_RS01600 SM00729 Elongator protein 3, MiaB family, Radical SAM NH62_RS01615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS01615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS01645 SM00849 Metallo-beta-lactamase superfamily NH62_RS01655 SM01350 NH62_RS01655 NH62_RS01670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NH62_RS01675 SM00481 DNA polymerase alpha chain like domain NH62_RS01715 SM00829 Enoylreductase NH62_RS01750 SM00530 Helix-turn-helix XRE-family like proteins NH62_RS01755 SM00530 Helix-turn-helix XRE-family like proteins NH62_RS01790 SM00357 Cold shock protein domain NH62_RS01820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NH62_RS01830 SM00226 Low molecular weight phosphatase family NH62_RS01950 SM01007 Class II Aldolase and Adducin N-terminal domain NH62_RS01965 SM00420 helix_turn_helix, Deoxyribose operon repressor NH62_RS01965 SM01134 NH62_RS01965 NH62_RS02000 SM00345 helix_turn_helix gluconate operon transcriptional repressor NH62_RS02030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NH62_RS02030 SM00091 PAS domain NH62_RS02030 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS02050 SM00642 Alpha-amylase domain NH62_RS02070 SM00382 ATPases associated with a variety of cellular activities NH62_RS02090 SM00387 Histidine kinase-like ATPases NH62_RS02095 SM00448 cheY-homologous receiver domain NH62_RS02095 SM00850 LytTr DNA-binding domain NH62_RS02105 SM00267 diguanylate cyclase NH62_RS02125 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NH62_RS02145 SM01091 Transporter associated domain NH62_RS02150 SM01266 NH62_RS02150 NH62_RS02230 SM00883 Chaperonin 10 Kd subunit NH62_RS02235 SM00924 MgtE intracellular N domain NH62_RS02290 SM00357 Cold shock protein domain NH62_RS02290 SM00955 NH62_RS02290 NH62_RS02295 SM00487 DEAD-like helicases superfamily NH62_RS02295 SM00490 helicase superfamily c-terminal domain NH62_RS02300 SM00020 Trypsin-like serine protease NH62_RS02335 SM00857 Resolvase, N terminal domain NH62_RS02410 SM00354 helix_turn _helix lactose operon repressor NH62_RS02425 SM00387 Histidine kinase-like ATPases NH62_RS02425 SM00448 cheY-homologous receiver domain NH62_RS02460 SM00890 Domain of unknown function NH62_RS02465 SM00387 Histidine kinase-like ATPases NH62_RS02465 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS02470 SM00448 cheY-homologous receiver domain NH62_RS02470 SM00862 Transcriptional regulatory protein, C terminal NH62_RS02490 SM00052 Putative diguanylate phosphodiesterase NH62_RS02505 SM00867 YceI-like domain NH62_RS02510 SM00116 Domain in cystathionine beta-synthase and other proteins. NH62_RS02545 SM00782 PhnA Zinc-Ribbon NH62_RS02580 SM00062 Bacterial periplasmic substrate-binding proteins NH62_RS02580 SM00267 diguanylate cyclase NH62_RS02600 SM00267 diguanylate cyclase NH62_RS02615 SM01002 Alanine dehydrogenase/PNT, C-terminal domain NH62_RS02615 SM01003 Alanine dehydrogenase/PNT, N-terminal domain NH62_RS02625 SM00387 Histidine kinase-like ATPases NH62_RS02625 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS02630 SM00448 cheY-homologous receiver domain NH62_RS02630 SM00862 Transcriptional regulatory protein, C terminal NH62_RS02670 SM00881 CoA binding domain NH62_RS02740 SM00382 ATPases associated with a variety of cellular activities NH62_RS02790 SM00345 helix_turn_helix gluconate operon transcriptional repressor NH62_RS02790 SM00866 NH62_RS02790 NH62_RS02865 SM00852 Probable molybdopterin binding domain NH62_RS02880 SM00450 Rhodanese Homology Domain NH62_RS02885 SM00636 NH62_RS02885 NH62_RS02905 SM00861 Transketolase, pyrimidine binding domain NH62_RS03000 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor NH62_RS03010 SM00450 Rhodanese Homology Domain NH62_RS03020 SM00563 Phosphate acyltransferases NH62_RS03060 SM00354 helix_turn _helix lactose operon repressor NH62_RS03065 SM00640 Glycosyl hydrolases family 32 NH62_RS03080 SM00091 PAS domain NH62_RS03080 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS03100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS03100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS03140 SM00354 helix_turn _helix lactose operon repressor NH62_RS03145 SM00421 helix_turn_helix, Lux Regulon NH62_RS03145 SM00448 cheY-homologous receiver domain NH62_RS03150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS03150 SM00387 Histidine kinase-like ATPases NH62_RS03165 SM00926 Molybdopterin oxidoreductase Fe4S4 domain NH62_RS03185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NH62_RS03190 SM00421 helix_turn_helix, Lux Regulon NH62_RS03190 SM00448 cheY-homologous receiver domain NH62_RS03195 SM00387 Histidine kinase-like ATPases NH62_RS03215 SM00382 ATPases associated with a variety of cellular activities NH62_RS03235 SM00822 NH62_RS03235 NH62_RS03260 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) NH62_RS03260 SM00267 diguanylate cyclase NH62_RS03270 SM00495 Chitin-binding domain type 3 NH62_RS03270 SM00636 NH62_RS03270 NH62_RS03285 SM00448 cheY-homologous receiver domain NH62_RS03290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS03290 SM00387 Histidine kinase-like ATPases NH62_RS03290 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS03310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS03310 SM00387 Histidine kinase-like ATPases NH62_RS03310 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS03310 SM00448 cheY-homologous receiver domain NH62_RS03320 SM00851 MGS-like domain NH62_RS03355 SM00387 Histidine kinase-like ATPases NH62_RS03360 SM00989 NH62_RS03360 NH62_RS03380 SM00382 ATPases associated with a variety of cellular activities NH62_RS03435 SM00387 Histidine kinase-like ATPases NH62_RS03435 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS03435 SM00448 cheY-homologous receiver domain NH62_RS03550 SM00062 Bacterial periplasmic substrate-binding proteins NH62_RS03550 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. NH62_RS03555 SM00382 ATPases associated with a variety of cellular activities NH62_RS03565 SM00327 von Willebrand factor (vWF) type A domain NH62_RS03570 SM00382 ATPases associated with a variety of cellular activities NH62_RS03595 SM00487 DEAD-like helicases superfamily NH62_RS03595 SM00490 helicase superfamily c-terminal domain NH62_RS03615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS03615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS03635 SM00796 Allophanate hydrolase subunit 1 NH62_RS03640 SM00797 Allophanate hydrolase subunit 2 NH62_RS03650 SM00984 UDP binding domain NH62_RS03660 SM00382 ATPases associated with a variety of cellular activities NH62_RS03675 SM00052 Putative diguanylate phosphodiesterase NH62_RS03675 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NH62_RS03675 SM00267 diguanylate cyclase NH62_RS03690 SM00271 DnaJ molecular chaperone homology domain NH62_RS03760 SM01321 NH62_RS03760 NH62_RS04020 SM00990 NH62_RS04020 NH62_RS04120 SM00530 Helix-turn-helix XRE-family like proteins NH62_RS04170 SM00871 Bacterial transcription activator, effector binding domain NH62_RS04195 SM01034 Sensors of blue-light using FAD NH62_RS04310 SM00360 RNA recognition motif NH62_RS04315 SM00360 RNA recognition motif NH62_RS04345 SM00360 RNA recognition motif NH62_RS04390 SM01034 Sensors of blue-light using FAD NH62_RS04410 SM00953 NH62_RS04410 NH62_RS04530 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain NH62_RS04730 SM00530 Helix-turn-helix XRE-family like proteins NH62_RS04780 SM00530 Helix-turn-helix XRE-family like proteins NH62_RS04800 SM01321 NH62_RS04800 NH62_RS04805 SM01057 Eukaryotic-type carbonic anhydrase NH62_RS04820 SM00936 Penicillin-binding protein 5, C-terminal domain NH62_RS04830 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS04830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS04840 SM00342 helix_turn_helix, arabinose operon control protein NH62_RS04850 SM00422 helix_turn_helix, mercury resistance NH62_RS04875 SM00387 Histidine kinase-like ATPases NH62_RS04875 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS04880 SM00448 cheY-homologous receiver domain NH62_RS04880 SM00862 Transcriptional regulatory protein, C terminal NH62_RS04900 SM00642 Alpha-amylase domain NH62_RS04915 SM00420 helix_turn_helix, Deoxyribose operon repressor NH62_RS04915 SM01134 NH62_RS04915 NH62_RS04930 SM01007 Class II Aldolase and Adducin N-terminal domain NH62_RS04940 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family NH62_RS04955 SM00448 cheY-homologous receiver domain NH62_RS04955 SM00862 Transcriptional regulatory protein, C terminal NH62_RS04960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS04960 SM00387 Histidine kinase-like ATPases NH62_RS04960 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS04990 SM00342 helix_turn_helix, arabinose operon control protein NH62_RS04995 SM00382 ATPases associated with a variety of cellular activities NH62_RS05025 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins NH62_RS05040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS05040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS05045 SM00458 Ricin-type beta-trefoil NH62_RS05055 SM00267 diguanylate cyclase NH62_RS05085 SM00387 Histidine kinase-like ATPases NH62_RS05090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. NH62_RS05110 SM00487 DEAD-like helicases superfamily NH62_RS05110 SM00490 helicase superfamily c-terminal domain NH62_RS05115 SM00974 NH62_RS05115 NH62_RS05120 SM01240 NH62_RS05120 NH62_RS05160 SM00448 cheY-homologous receiver domain NH62_RS05180 SM00357 Cold shock protein domain NH62_RS05190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. NH62_RS05190 SM00382 ATPases associated with a variety of cellular activities NH62_RS05220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS05220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS05240 SM00327 von Willebrand factor (vWF) type A domain NH62_RS05245 SM00028 Tetratricopeptide repeats NH62_RS05260 SM00357 Cold shock protein domain NH62_RS05265 SM00267 diguanylate cyclase NH62_RS05370 SM00382 ATPases associated with a variety of cellular activities NH62_RS05370 SM00448 cheY-homologous receiver domain NH62_RS05375 SM00091 PAS domain NH62_RS05375 SM00387 Histidine kinase-like ATPases NH62_RS05375 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS05380 SM00495 Chitin-binding domain type 3 NH62_RS05700 SM00267 diguanylate cyclase NH62_RS06260 SM00448 cheY-homologous receiver domain NH62_RS07465 SM00642 Alpha-amylase domain NH62_RS09110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). NH62_RS10625 SM01207 NH62_RS10625 NH62_RS11030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS11030 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS11145 SM00316 Ribosomal protein S1-like RNA-binding domain NH62_RS11410 SM00830 Chorismate mutase type II NH62_RS11445 SM00267 diguanylate cyclase NH62_RS12780 SM00729 Elongator protein 3, MiaB family, Radical SAM NH62_RS13125 SM00267 diguanylate cyclase NH62_RS14575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS14575 SM00388 His Kinase A (phosphoacceptor) domain NH62_RS14920 SM01231 NH62_RS14920 NH62_RS14970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain NH62_RS15915 SM01060 NH62_RS15915 NH62_RS16235 SM00052 Putative diguanylate phosphodiesterase NH62_RS16325 SM00116 Domain in cystathionine beta-synthase and other proteins. NH62_RS17190 SM00763 PrkA AAA domain