locus-tag class description GPY00_RS00010 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS00010 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY00_RS00010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS00015 PF00939 Sodium:sulfate symporter transmembrane region GPY00_RS00020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS00020 PF00672 HAMP domain GPY00_RS00025 PF00842 Alanine racemase, C-terminal domain GPY00_RS00025 PF01168 Alanine racemase, N-terminal domain GPY00_RS00030 PF00892 EamA-like transporter family GPY00_RS00040 PF13302 Acetyltransferase (GNAT) domain GPY00_RS00045 PF18024 Helix-turn-helix domain GPY00_RS00045 PF00158 Sigma-54 interaction domain GPY00_RS00050 PF05128 Domain of unknown function (DUF697) GPY00_RS00055 PF04317 YcjX-like family, DUF463 GPY00_RS00070 PF00425 chorismate binding enzyme GPY00_RS00070 PF04715 Anthranilate synthase component I, N terminal region GPY00_RS00075 PF00293 NUDIX domain GPY00_RS00080 PF03222 Tryptophan/tyrosine permease family GPY00_RS00085 PF03313 Serine dehydratase alpha chain GPY00_RS00085 PF03315 Serine dehydratase beta chain GPY00_RS00090 PF01242 6-pyruvoyl tetrahydropterin synthase GPY00_RS00095 PF00672 HAMP domain GPY00_RS00095 PF12729 Four helix bundle sensory module for signal transduction GPY00_RS00095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS00100 PF01336 OB-fold nucleic acid binding domain GPY00_RS00100 PF00152 tRNA synthetases class II (D, K and N) GPY00_RS00105 PF08543 Phosphomethylpyrimidine kinase GPY00_RS00110 PF01966 HD domain GPY00_RS00110 PF00672 HAMP domain GPY00_RS00120 PF00155 Aminotransferase class I and II GPY00_RS00135 PF00672 HAMP domain GPY00_RS00135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS00135 PF17200 Single Cache domain 2 GPY00_RS00140 PF04349 Periplasmic glucan biosynthesis protein, MdoG GPY00_RS00145 PF13506 Glycosyl transferase family 21 GPY00_RS00150 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS00155 PF04794 YdjC-like protein GPY00_RS00160 PF02056 Family 4 glycosyl hydrolase GPY00_RS00160 PF11975 Family 4 glycosyl hydrolase C-terminal domain GPY00_RS00165 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GPY00_RS00170 PF02378 Phosphotransferase system, EIIC GPY00_RS00175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY00_RS00180 PF01522 Polysaccharide deacetylase GPY00_RS00185 PF02028 BCCT, betaine/carnitine/choline family transporter GPY00_RS00190 PF01047 MarR family GPY00_RS00195 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS00195 PF00072 Response regulator receiver domain GPY00_RS00200 PF07730 Histidine kinase GPY00_RS00200 PF17200 Single Cache domain 2 GPY00_RS00205 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY00_RS00215 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY00_RS00230 PF00753 Metallo-beta-lactamase superfamily GPY00_RS00235 PF05951 Bacterial protein of unknown function (DUF882) GPY00_RS00265 PF00925 GTP cyclohydrolase II GPY00_RS00275 PF07690 Major Facilitator Superfamily GPY00_RS00290 PF00521 DNA gyrase/topoisomerase IV, subunit A GPY00_RS00290 PF03989 DNA gyrase C-terminal domain, beta-propeller GPY00_RS00300 PF00317 Ribonucleotide reductase, all-alpha domain GPY00_RS00300 PF02867 Ribonucleotide reductase, barrel domain GPY00_RS00300 PF03477 ATP cone domain GPY00_RS00305 PF00268 Ribonucleotide reductase, small chain GPY00_RS00310 PF00970 Oxidoreductase FAD-binding domain GPY00_RS00310 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY00_RS00310 PF00175 Oxidoreductase NAD-binding domain GPY00_RS00320 PF00994 Probable molybdopterin binding domain GPY00_RS00335 PF17200 Single Cache domain 2 GPY00_RS00335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS00335 PF00672 HAMP domain GPY00_RS00350 PF00005 ABC transporter GPY00_RS00355 PF01032 FecCD transport family GPY00_RS00360 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GPY00_RS00370 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GPY00_RS00375 PF02654 Cobalamin-5-phosphate synthase GPY00_RS00380 PF02277 Phosphoribosyltransferase GPY00_RS00385 PF01641 SelR domain GPY00_RS00395 PF00929 Exonuclease GPY00_RS00395 PF08411 Exonuclease C-terminal GPY00_RS00400 PF03788 LrgA family GPY00_RS00405 PF04172 LrgB-like family GPY00_RS00410 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GPY00_RS00410 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY00_RS00420 PF02222 ATP-grasp domain GPY00_RS00430 PF05724 Thiopurine S-methyltransferase (TPMT) GPY00_RS00445 PF00216 Bacterial DNA-binding protein GPY00_RS00450 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GPY00_RS00450 PF03483 B3/4 domain GPY00_RS00450 PF03484 tRNA synthetase B5 domain GPY00_RS00450 PF03147 Ferredoxin-fold anticodon binding domain GPY00_RS00450 PF01588 Putative tRNA binding domain GPY00_RS00455 PF01409 tRNA synthetases class II core domain (F) GPY00_RS00455 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GPY00_RS00465 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS00465 PF00072 Response regulator receiver domain GPY00_RS00490 PF01066 CDP-alcohol phosphatidyltransferase GPY00_RS00495 PF08459 UvrC Helix-hairpin-helix N-terminal GPY00_RS00495 PF01541 GIY-YIG catalytic domain GPY00_RS00495 PF02151 UvrB/uvrC motif GPY00_RS00500 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS00500 PF00072 Response regulator receiver domain GPY00_RS00505 PF00136 DNA polymerase family B GPY00_RS00505 PF03104 DNA polymerase family B, exonuclease domain GPY00_RS00510 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS00510 PF00563 EAL domain GPY00_RS00510 PF13426 PAS domain GPY00_RS00520 PF08207 Elongation factor P (EF-P) KOW-like domain GPY00_RS00520 PF01132 Elongation factor P (EF-P) OB domain GPY00_RS00520 PF09285 Elongation factor P, C-terminal GPY00_RS00525 PF04269 Protein of unknown function, DUF440 GPY00_RS00535 PF00392 Bacterial regulatory proteins, gntR family GPY00_RS00535 PF07702 UTRA domain GPY00_RS00540 PF01979 Amidohydrolase family GPY00_RS00545 PF00491 Arginase family GPY00_RS00550 PF17392 Urocanase C-terminal domain GPY00_RS00550 PF17391 Urocanase N-terminal domain GPY00_RS00550 PF01175 Urocanase Rossmann-like domain GPY00_RS00555 PF00221 Aromatic amino acid lyase GPY00_RS00565 PF00089 Trypsin GPY00_RS00570 PF04191 Phospholipid methyltransferase GPY00_RS00575 PF01565 FAD binding domain GPY00_RS00575 PF02913 FAD linked oxidases, C-terminal domain GPY00_RS00575 PF13183 4Fe-4S dicluster domain GPY00_RS00590 PF00691 OmpA family GPY00_RS00590 PF13488 Glycine zipper GPY00_RS00610 PF01259 SAICAR synthetase GPY00_RS00620 PF00390 Malic enzyme, N-terminal domain GPY00_RS00620 PF03949 Malic enzyme, NAD binding domain GPY00_RS00630 PF02698 DUF218 domain GPY00_RS00635 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS00635 PF08448 PAS fold GPY00_RS00640 PF00266 Aminotransferase class-V GPY00_RS00650 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS00655 PF00005 ABC transporter GPY00_RS00655 PF00664 ABC transporter transmembrane region GPY00_RS00660 PF00664 ABC transporter transmembrane region GPY00_RS00660 PF00005 ABC transporter GPY00_RS00665 PF00849 RNA pseudouridylate synthase GPY00_RS00665 PF01479 S4 domain GPY00_RS00670 PF01300 Telomere recombination GPY00_RS00675 PF02811 PHP domain GPY00_RS00680 PF08056 Tryptophan operon leader peptide GPY00_RS00685 PF04715 Anthranilate synthase component I, N terminal region GPY00_RS00685 PF00425 chorismate binding enzyme GPY00_RS00690 PF00117 Glutamine amidotransferase class-I GPY00_RS00695 PF00591 Glycosyl transferase family, a/b domain GPY00_RS00695 PF02885 Glycosyl transferase family, helical bundle domain GPY00_RS00700 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GPY00_RS00700 PF00218 Indole-3-glycerol phosphate synthase GPY00_RS00705 PF00291 Pyridoxal-phosphate dependent enzyme GPY00_RS00710 PF00290 Tryptophan synthase alpha chain GPY00_RS00715 PF00375 Sodium:dicarboxylate symporter family GPY00_RS00720 PF00265 Thymidine kinase GPY00_RS00725 PF01336 OB-fold nucleic acid binding domain GPY00_RS00725 PF02938 GAD domain GPY00_RS00725 PF00152 tRNA synthetases class II (D, K and N) GPY00_RS00730 PF01904 Protein of unknown function DUF72 GPY00_RS00735 PF13649 Methyltransferase domain GPY00_RS00740 PF08003 Protein of unknown function (DUF1698) GPY00_RS00745 PF18030 RimK PreATP-grasp domain GPY00_RS00745 PF08443 RimK-like ATP-grasp domain GPY00_RS00760 PF00266 Aminotransferase class-V GPY00_RS00770 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS00770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS00770 PF00989 PAS fold GPY00_RS00785 PF04994 TfoX C-terminal domain GPY00_RS00785 PF04993 TfoX N-terminal domain GPY00_RS00795 PF03956 Lysine exporter LysO GPY00_RS00805 PF00282 Pyridoxal-dependent decarboxylase conserved domain GPY00_RS00810 PF01380 SIS domain GPY00_RS00810 PF01418 Helix-turn-helix domain, rpiR family GPY00_RS00815 PF00465 Iron-containing alcohol dehydrogenase GPY00_RS00815 PF00171 Aldehyde dehydrogenase family GPY00_RS00820 PF00462 Glutaredoxin GPY00_RS00825 PF06826 Predicted Permease Membrane Region GPY00_RS00825 PF02080 TrkA-C domain GPY00_RS00830 PF17871 AAA lid domain GPY00_RS00830 PF02861 Clp amino terminal domain, pathogenicity island component GPY00_RS00830 PF10431 C-terminal, D2-small domain, of ClpB protein GPY00_RS00830 PF07724 AAA domain (Cdc48 subfamily) GPY00_RS00830 PF00004 ATPase family associated with various cellular activities (AAA) GPY00_RS00835 PF02617 ATP-dependent Clp protease adaptor protein ClpS GPY00_RS00840 PF00313 'Cold-shock' DNA-binding domain GPY00_RS00845 PF03971 Monomeric isocitrate dehydrogenase GPY00_RS00850 PF00849 RNA pseudouridylate synthase GPY00_RS00855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GPY00_RS00855 PF01502 Phosphoribosyl-AMP cyclohydrolase GPY00_RS00860 PF00977 Histidine biosynthesis protein GPY00_RS00865 PF00977 Histidine biosynthesis protein GPY00_RS00870 PF00117 Glutamine amidotransferase class-I GPY00_RS00875 PF00475 Imidazoleglycerol-phosphate dehydratase GPY00_RS00875 PF08645 Polynucleotide kinase 3 phosphatase GPY00_RS00880 PF00155 Aminotransferase class I and II GPY00_RS00885 PF00815 Histidinol dehydrogenase GPY00_RS00890 PF08029 HisG, C-terminal domain GPY00_RS00890 PF01634 ATP phosphoribosyltransferase GPY00_RS00895 PF03553 Na+/H+ antiporter family GPY00_RS00900 PF00816 H-NS histone family GPY00_RS00905 PF00294 pfkB family carbohydrate kinase GPY00_RS00915 PF04356 Protein of unknown function (DUF489) GPY00_RS00920 PF08328 Adenylosuccinate lyase C-terminal GPY00_RS00920 PF00206 Lyase GPY00_RS00930 PF16036 Chalcone isomerase-like GPY00_RS00955 PF00106 short chain dehydrogenase GPY00_RS00965 PF01435 Peptidase family M48 GPY00_RS00980 PF08241 Methyltransferase domain GPY00_RS00985 PF00155 Aminotransferase class I and II GPY00_RS00990 PF04055 Radical SAM superfamily GPY00_RS00990 PF06968 Biotin and Thiamin Synthesis associated domain GPY00_RS00995 PF00202 Aminotransferase class-III GPY00_RS01000 PF02403 Seryl-tRNA synthetase N-terminal domain GPY00_RS01000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY00_RS01005 PF12002 MgsA AAA+ ATPase C terminal GPY00_RS01005 PF16193 AAA C-terminal domain GPY00_RS01005 PF00004 ATPase family associated with various cellular activities (AAA) GPY00_RS01010 PF03548 Outer membrane lipoprotein carrier protein LolA GPY00_RS01015 PF07517 SecA DEAD-like domain GPY00_RS01015 PF01043 SecA preprotein cross-linking domain GPY00_RS01015 PF07516 SecA Wing and Scaffold domain GPY00_RS01015 PF02810 SEC-C motif GPY00_RS01020 PF01207 Dihydrouridine synthase (Dus) GPY00_RS01025 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS01030 PF00005 ABC transporter GPY00_RS01035 PF02653 Branched-chain amino acid transport system / permease component GPY00_RS01045 PF09905 DNA-binding protein VF530 GPY00_RS01050 PF04217 Protein of unknown function, DUF412 GPY00_RS01055 PF00871 Acetokinase family GPY00_RS01060 PF01515 Phosphate acetyl/butaryl transferase GPY00_RS01060 PF07085 DRTGG domain GPY00_RS01065 PF13409 Glutathione S-transferase, N-terminal domain GPY00_RS01070 PF00005 ABC transporter GPY00_RS01070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY00_RS01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY00_RS01075 PF00005 ABC transporter GPY00_RS01080 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS01080 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY00_RS01085 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS01090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY00_RS01100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS01100 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS01100 PF08448 PAS fold GPY00_RS01100 PF00072 Response regulator receiver domain GPY00_RS01100 PF13188 PAS domain GPY00_RS01105 PF00158 Sigma-54 interaction domain GPY00_RS01105 PF02954 Bacterial regulatory protein, Fis family GPY00_RS01105 PF00072 Response regulator receiver domain GPY00_RS01110 PF13188 PAS domain GPY00_RS01110 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS01110 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS01110 PF00563 EAL domain GPY00_RS01115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS01115 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS01120 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS01120 PF13188 PAS domain GPY00_RS01120 PF13426 PAS domain GPY00_RS01120 PF00989 PAS fold GPY00_RS01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS01130 PF00072 Response regulator receiver domain GPY00_RS01145 PF01300 Telomere recombination GPY00_RS01145 PF03481 Putative GTP-binding controlling metal-binding GPY00_RS01165 PF01161 Phosphatidylethanolamine-binding protein GPY00_RS01175 PF06483 Chitinase C GPY00_RS01175 PF00704 Glycosyl hydrolases family 18 GPY00_RS01190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY00_RS01190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY00_RS01195 PF01022 Bacterial regulatory protein, arsR family GPY00_RS01205 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS01205 PF08448 PAS fold GPY00_RS01215 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY00_RS01230 PF01037 Lrp/AsnC ligand binding domain GPY00_RS01230 PF13404 AsnC-type helix-turn-helix domain GPY00_RS01235 PF00291 Pyridoxal-phosphate dependent enzyme GPY00_RS01240 PF01343 Peptidase family S49 GPY00_RS01240 PF08496 Peptidase family S49 N-terminal GPY00_RS01245 PF00106 short chain dehydrogenase GPY00_RS01250 PF03692 Putative zinc- or iron-chelating domain GPY00_RS01255 PF03692 Putative zinc- or iron-chelating domain GPY00_RS01260 PF13662 Toprim domain GPY00_RS01260 PF02132 RecR protein GPY00_RS01265 PF02575 YbaB/EbfC DNA-binding family GPY00_RS01270 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GPY00_RS01270 PF12170 DNA polymerase III tau subunit V interacting with alpha GPY00_RS01270 PF12169 DNA polymerase III subunits gamma and tau domain III GPY00_RS01275 PF00156 Phosphoribosyl transferase domain GPY00_RS01280 PF04304 Protein of unknown function (DUF454) GPY00_RS01290 PF00072 Response regulator receiver domain GPY00_RS01295 PF03466 LysR substrate binding domain GPY00_RS01295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS01300 PF00881 Nitroreductase family GPY00_RS01305 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GPY00_RS01305 PF00378 Enoyl-CoA hydratase/isomerase GPY00_RS01305 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GPY00_RS01310 PF00108 Thiolase, N-terminal domain GPY00_RS01310 PF02803 Thiolase, C-terminal domain GPY00_RS01315 PF08281 Sigma-70, region 4 GPY00_RS01315 PF04542 Sigma-70 region 2 GPY00_RS01325 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY00_RS01330 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY00_RS01335 PF01451 Low molecular weight phosphotyrosine protein phosphatase GPY00_RS01340 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GPY00_RS01340 PF12557 Cob(I)alamin adenosyltransferase N terminal GPY00_RS01345 PF05170 AsmA family GPY00_RS01350 PF00485 Phosphoribulokinase / Uridine kinase family GPY00_RS01355 PF10609 NUBPL iron-transfer P-loop NTPase GPY00_RS01360 PF01588 Putative tRNA binding domain GPY00_RS01360 PF09334 tRNA synthetases class I (M) GPY00_RS01370 PF01048 Phosphorylase superfamily GPY00_RS01375 PF00403 Heavy-metal-associated domain GPY00_RS01380 PF07085 DRTGG domain GPY00_RS01380 PF03061 Thioesterase superfamily GPY00_RS01380 PF00571 CBS domain GPY00_RS01380 PF00392 Bacterial regulatory proteins, gntR family GPY00_RS01385 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS01385 PF07694 5TMR of 5TMR-LYT GPY00_RS01390 PF02391 MoaE protein GPY00_RS01395 PF02597 ThiS family GPY00_RS01400 PF01967 MoaC family GPY00_RS01405 PF00994 Probable molybdopterin binding domain GPY00_RS01410 PF06463 Molybdenum Cofactor Synthesis C GPY00_RS01410 PF04055 Radical SAM superfamily GPY00_RS01415 PF01933 Uncharacterised protein family UPF0052 GPY00_RS01420 PF01627 Hpt domain GPY00_RS01425 PF00158 Sigma-54 interaction domain GPY00_RS01425 PF00072 Response regulator receiver domain GPY00_RS01425 PF02954 Bacterial regulatory protein, Fis family GPY00_RS01430 PF17757 UvrB interaction domain GPY00_RS01430 PF02151 UvrB/uvrC motif GPY00_RS01430 PF04851 Type III restriction enzyme, res subunit GPY00_RS01430 PF00271 Helicase conserved C-terminal domain GPY00_RS01430 PF12344 Ultra-violet resistance protein B GPY00_RS01440 PF02508 Rnf-Nqr subunit, membrane protein GPY00_RS01445 PF04060 Putative Fe-S cluster GPY00_RS01450 PF10531 SLBB domain GPY00_RS01450 PF13375 RnfC Barrel sandwich hybrid domain GPY00_RS01450 PF12838 4Fe-4S dicluster domain GPY00_RS01450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GPY00_RS01455 PF03116 NQR2, RnfD, RnfE family GPY00_RS01460 PF04205 FMN-binding domain GPY00_RS01465 PF02508 Rnf-Nqr subunit, membrane protein GPY00_RS01470 PF00633 Helix-hairpin-helix motif GPY00_RS01470 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY00_RS01470 PF10576 Iron-sulfur binding domain of endonuclease III GPY00_RS01475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY00_RS01480 PF10952 Protein of unknown function (DUF2753) GPY00_RS01485 PF18393 MotY N-terminal domain GPY00_RS01485 PF00691 OmpA family GPY00_RS01490 PF00929 Exonuclease GPY00_RS01495 PF13726 Na+-H+ antiporter family GPY00_RS01495 PF03553 Na+/H+ antiporter family GPY00_RS01500 PF00156 Phosphoribosyl transferase domain GPY00_RS01505 PF02674 Colicin V production protein GPY00_RS01510 PF05036 Sporulation related domain GPY00_RS01515 PF02875 Mur ligase family, glutamate ligase domain GPY00_RS01515 PF08245 Mur ligase middle domain GPY00_RS01520 PF01039 Carboxyl transferase domain GPY00_RS01520 PF17848 Acetyl-coA carboxylase zinc finger domain GPY00_RS01525 PF01416 tRNA pseudouridine synthase GPY00_RS01535 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY00_RS01535 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GPY00_RS01540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GPY00_RS01540 PF00367 phosphotransferase system, EIIB GPY00_RS01540 PF02378 Phosphotransferase system, EIIC GPY00_RS01545 PF01979 Amidohydrolase family GPY00_RS01550 PF01047 MarR family GPY00_RS01550 PF00480 ROK family GPY00_RS01555 PF00999 Sodium/hydrogen exchanger family GPY00_RS01555 PF02254 TrkA-N domain GPY00_RS01560 PF13537 Glutamine amidotransferase domain GPY00_RS01560 PF00733 Asparagine synthase GPY00_RS01565 PF02357 Transcription termination factor nusG GPY00_RS01570 PF00854 POT family GPY00_RS01575 PF00762 Ferrochelatase GPY00_RS01580 PF05191 Adenylate kinase, active site lid GPY00_RS01585 PF00183 Hsp90 protein GPY00_RS01585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS01590 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS01595 PF17323 Trans-membrane regulatory protein ToxS GPY00_RS01605 PF12850 Calcineurin-like phosphoesterase superfamily domain GPY00_RS01610 PF08338 Domain of unknown function (DUF1731) GPY00_RS01610 PF01370 NAD dependent epimerase/dehydratase family GPY00_RS01615 PF00106 short chain dehydrogenase GPY00_RS01625 PF00085 Thioredoxin GPY00_RS01630 PF16200 C-terminal region of band_7 GPY00_RS01630 PF01145 SPFH domain / Band 7 family GPY00_RS01635 PF01957 NfeD-like C-terminal, partner-binding GPY00_RS01640 PF13411 MerR HTH family regulatory protein GPY00_RS01650 PF13609 Gram-negative porin GPY00_RS01655 PF00533 BRCA1 C Terminus (BRCT) domain GPY00_RS01655 PF12826 Helix-hairpin-helix motif GPY00_RS01655 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GPY00_RS01655 PF03120 NAD-dependent DNA ligase OB-fold domain GPY00_RS01655 PF01653 NAD-dependent DNA ligase adenylation domain GPY00_RS01660 PF04354 ZipA, C-terminal FtsZ-binding domain GPY00_RS01670 PF00291 Pyridoxal-phosphate dependent enzyme GPY00_RS01680 PF00381 PTS HPr component phosphorylation site GPY00_RS01685 PF05524 PEP-utilising enzyme, N-terminal GPY00_RS01685 PF00391 PEP-utilising enzyme, mobile domain GPY00_RS01685 PF02896 PEP-utilising enzyme, TIM barrel domain GPY00_RS01690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GPY00_RS01695 PF01494 FAD binding domain GPY00_RS01700 PF04055 Radical SAM superfamily GPY00_RS01700 PF01938 TRAM domain GPY00_RS01700 PF00919 Uncharacterized protein family UPF0004 GPY00_RS01705 PF02562 PhoH-like protein GPY00_RS01710 PF02130 Uncharacterized protein family UPF0054 GPY00_RS01715 PF03471 Transporter associated domain GPY00_RS01715 PF00571 CBS domain GPY00_RS01720 PF00795 Carbon-nitrogen hydrolase GPY00_RS01725 PF07295 Zinc-ribbon containing domain GPY00_RS01730 PF00133 tRNA synthetases class I (I, L, M and V) GPY00_RS01730 PF13603 Leucyl-tRNA synthetase, Domain 2 GPY00_RS01730 PF08264 Anticodon-binding domain of tRNA GPY00_RS01735 PF04390 Lipopolysaccharide-assembly GPY00_RS01740 PF06144 DNA polymerase III, delta subunit GPY00_RS01740 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GPY00_RS01750 PF02590 Predicted SPOUT methyltransferase GPY00_RS01755 PF03717 Penicillin-binding Protein dimerisation domain GPY00_RS01755 PF00905 Penicillin binding protein transpeptidase domain GPY00_RS01760 PF01098 Cell cycle protein GPY00_RS01765 PF03330 Lytic transglycolase GPY00_RS01765 PF05036 Sporulation related domain GPY00_RS01770 PF07943 Penicillin-binding protein 5, C-terminal domain GPY00_RS01770 PF00768 D-alanyl-D-alanine carboxypeptidase GPY00_RS01775 PF04359 Protein of unknown function (DUF493) GPY00_RS01780 PF03099 Biotin/lipoate A/B protein ligase family GPY00_RS01785 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GPY00_RS01785 PF04055 Radical SAM superfamily GPY00_RS01795 PF00464 Serine hydroxymethyltransferase GPY00_RS01815 PF13614 AAA domain GPY00_RS01815 PF13807 G-rich domain on putative tyrosine kinase GPY00_RS01815 PF02706 Chain length determinant protein GPY00_RS01820 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GPY00_RS01820 PF10531 SLBB domain GPY00_RS01820 PF02563 Polysaccharide biosynthesis/export protein GPY00_RS01830 PF02397 Bacterial sugar transferase GPY00_RS01845 PF12561 ToxR activated gene A lipoprotein domain GPY00_RS01845 PF17945 Beta/Gamma crystallin GPY00_RS01860 PF03808 Glycosyl transferase WecB/TagA/CpsF family GPY00_RS01870 PF00534 Glycosyl transferases group 1 GPY00_RS01870 PF00862 Sucrose synthase GPY00_RS01880 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS01905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GPY00_RS01905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GPY00_RS01905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GPY00_RS01910 PF02350 UDP-N-acetylglucosamine 2-epimerase GPY00_RS01915 PF01451 Low molecular weight phosphotyrosine protein phosphatase GPY00_RS01920 PF00873 AcrB/AcrD/AcrF family GPY00_RS01925 PF13533 Biotin-lipoyl like GPY00_RS01950 PF00128 Alpha amylase, catalytic domain GPY00_RS01950 PF16657 Maltogenic Amylase, C-terminal domain GPY00_RS01955 PF00367 phosphotransferase system, EIIB GPY00_RS01955 PF02378 Phosphotransferase system, EIIC GPY00_RS01960 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS01970 PF00005 ABC transporter GPY00_RS01970 PF09383 NIL domain GPY00_RS01975 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS01980 PF03180 NLPA lipoprotein GPY00_RS01985 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) GPY00_RS01990 PF07348 Syd protein (SUKH-2) GPY00_RS01995 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GPY00_RS01995 PF14489 QueF-like protein GPY00_RS02005 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS02015 PF01367 5'-3' exonuclease, C-terminal SAM fold GPY00_RS02015 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GPY00_RS02020 PF04241 Protein of unknown function (DUF423) GPY00_RS02025 PF03466 LysR substrate binding domain GPY00_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS02030 PF02926 THUMP domain GPY00_RS02030 PF02568 Thiamine biosynthesis protein (ThiI) GPY00_RS02035 PF13677 Membrane MotB of proton-channel complex MotA/MotB GPY00_RS02035 PF00691 OmpA family GPY00_RS02040 PF01618 MotA/TolQ/ExbB proton channel family GPY00_RS02045 PF02609 Exonuclease VII small subunit GPY00_RS02050 PF00348 Polyprenyl synthetase GPY00_RS02055 PF02780 Transketolase, C-terminal domain GPY00_RS02055 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GPY00_RS02055 PF02779 Transketolase, pyrimidine binding domain GPY00_RS02060 PF00849 RNA pseudouridylate synthase GPY00_RS02065 PF04287 tRNA pseudouridine synthase C GPY00_RS02080 PF13302 Acetyltransferase (GNAT) domain GPY00_RS02090 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GPY00_RS02095 PF01609 Transposase DDE domain GPY00_RS02095 PF13006 Insertion element 4 transposase N-terminal GPY00_RS02100 PF03806 AbgT putative transporter family GPY00_RS02105 PF00444 Ribosomal protein L36 GPY00_RS02110 PF01197 Ribosomal protein L31 GPY00_RS02115 PF01980 tRNA-methyltransferase O GPY00_RS02115 PF18389 TrmO C-terminal domain GPY00_RS02120 PF03129 Anticodon binding domain GPY00_RS02120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY00_RS02120 PF04073 Aminoacyl-tRNA editing domain GPY00_RS02130 PF06786 Uncharacterised protein family (UPF0253) GPY00_RS02140 PF13006 Insertion element 4 transposase N-terminal GPY00_RS02140 PF01609 Transposase DDE domain GPY00_RS02145 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GPY00_RS02145 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GPY00_RS02145 PF02769 AIR synthase related protein, C-terminal domain GPY00_RS02155 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY00_RS02155 PF01464 Transglycosylase SLT domain GPY00_RS02160 PF14437 MafB19-like deaminase GPY00_RS02165 PF03806 AbgT putative transporter family GPY00_RS02195 PF07963 Prokaryotic N-terminal methylation motif GPY00_RS02195 PF08334 Type II secretion system (T2SS), protein G GPY00_RS02200 PF00684 DnaJ central domain GPY00_RS02200 PF00226 DnaJ domain GPY00_RS02200 PF01556 DnaJ C terminal domain GPY00_RS02205 PF00012 Hsp70 protein GPY00_RS02210 PF01025 GrpE GPY00_RS02215 PF01513 ATP-NAD kinase GPY00_RS02220 PF02463 RecF/RecN/SMC N terminal domain GPY00_RS02225 PF04355 SmpA / OmlA family GPY00_RS02230 PF03658 RnfH family Ubiquitin GPY00_RS02235 PF03364 Polyketide cyclase / dehydrase and lipid transport GPY00_RS02240 PF01668 SmpB protein GPY00_RS02275 PF01551 Peptidase family M23 GPY00_RS02275 PF04225 Opacity-associated protein A LysM-like domain GPY00_RS02290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS02290 PF00672 HAMP domain GPY00_RS02290 PF02743 Cache domain GPY00_RS02295 PF01478 Type IV leader peptidase family GPY00_RS02295 PF06750 Bacterial Peptidase A24 N-terminal domain GPY00_RS02300 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family GPY00_RS02305 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F GPY00_RS02310 PF00482 Type II secretion system (T2SS), protein F GPY00_RS02315 PF00437 Type II/IV secretion system protein GPY00_RS02320 PF17456 Toxin-coregulated pilus protein S GPY00_RS02340 PF10671 Toxin co-regulated pilus biosynthesis protein Q GPY00_RS02350 PF05946 Toxin-coregulated pilus subunit TcpA GPY00_RS02350 PF07963 Prokaryotic N-terminal methylation motif GPY00_RS02360 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS02365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS02370 PF08534 Redoxin GPY00_RS02395 PF00171 Aldehyde dehydrogenase family GPY00_RS02400 PF13737 Transposase DDE domain GPY00_RS02410 PF04002 RadC-like JAB domain GPY00_RS02490 PF11953 Domain of unknown function (DUF3470) GPY00_RS02490 PF00037 4Fe-4S binding domain GPY00_RS02495 PF08032 RNA 2'-O ribose methyltransferase substrate binding GPY00_RS02495 PF00588 SpoU rRNA Methylase family GPY00_RS02500 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GPY00_RS02505 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GPY00_RS02510 PF04223 Citrate lyase, alpha subunit (CitF) GPY00_RS02515 PF03328 HpcH/HpaI aldolase/citrate lyase family GPY00_RS02520 PF06857 Malonate decarboxylase delta subunit (MdcD) GPY00_RS02525 PF08218 Citrate lyase ligase C-terminal domain GPY00_RS02530 PF03390 2-hydroxycarboxylate transporter family GPY00_RS02535 PF04277 Oxaloacetate decarboxylase, gamma chain GPY00_RS02540 PF00682 HMGL-like GPY00_RS02540 PF02436 Conserved carboxylase domain GPY00_RS02540 PF00364 Biotin-requiring enzyme GPY00_RS02545 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GPY00_RS02550 PF17203 Single cache domain 3 GPY00_RS02550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS02555 PF12431 Transcriptional regulator GPY00_RS02555 PF00072 Response regulator receiver domain GPY00_RS02570 PF03466 LysR substrate binding domain GPY00_RS02570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS02575 PF01266 FAD dependent oxidoreductase GPY00_RS02580 PF01235 Sodium:alanine symporter family GPY00_RS02585 PF17837 4'-phosphopantetheinyl transferase N-terminal domain GPY00_RS02585 PF01648 4'-phosphopantetheinyl transferase superfamily GPY00_RS02590 PF00005 ABC transporter GPY00_RS02595 PF01032 FecCD transport family GPY00_RS02600 PF01032 FecCD transport family GPY00_RS02605 PF01497 Periplasmic binding protein GPY00_RS02620 PF00425 chorismate binding enzyme GPY00_RS02625 PF00501 AMP-binding enzyme GPY00_RS02625 PF13193 AMP-binding enzyme C-terminal domain GPY00_RS02630 PF00550 Phosphopantetheine attachment site GPY00_RS02630 PF00857 Isochorismatase family GPY00_RS02635 PF01184 GPR1/FUN34/yaaH family GPY00_RS02640 PF00704 Glycosyl hydrolases family 18 GPY00_RS02640 PF06483 Chitinase C GPY00_RS02645 PF00117 Glutamine amidotransferase class-I GPY00_RS02645 PF02540 NAD synthase GPY00_RS02645 PF00958 GMP synthase C terminal domain GPY00_RS02650 PF00571 CBS domain GPY00_RS02650 PF00478 IMP dehydrogenase / GMP reductase domain GPY00_RS02655 PF13742 OB-fold nucleic acid binding domain GPY00_RS02655 PF02601 Exonuclease VII, large subunit GPY00_RS02670 PF01926 50S ribosome-binding GTPase GPY00_RS02670 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GPY00_RS02675 PF13360 PQQ-like domain GPY00_RS02680 PF09976 Tetratricopeptide repeat-like domain GPY00_RS02685 PF13393 Histidyl-tRNA synthetase GPY00_RS02685 PF03129 Anticodon binding domain GPY00_RS02690 PF04551 GcpE protein GPY00_RS02695 PF13464 Domain of unknown function (DUF4115) GPY00_RS02700 PF04055 Radical SAM superfamily GPY00_RS02705 PF00334 Nucleoside diphosphate kinase GPY00_RS02710 PF00883 Cytosol aminopeptidase family, catalytic domain GPY00_RS02710 PF12404 Peptidase GPY00_RS02715 PF04384 Iron-sulphur cluster assembly GPY00_RS02720 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY00_RS02725 PF00012 Hsp70 protein GPY00_RS02730 PF07743 HSCB C-terminal oligomerisation domain GPY00_RS02730 PF00226 DnaJ domain GPY00_RS02735 PF01521 Iron-sulphur cluster biosynthesis GPY00_RS02740 PF01592 NifU-like N terminal domain GPY00_RS02745 PF00266 Aminotransferase class-V GPY00_RS02750 PF02082 Transcriptional regulator GPY00_RS02755 PF00588 SpoU rRNA Methylase family GPY00_RS02760 PF00459 Inositol monophosphatase family GPY00_RS02765 PF02355 Protein export membrane protein GPY00_RS02765 PF07549 SecD/SecF GG Motif GPY00_RS02770 PF13721 SecD export protein N-terminal TM region GPY00_RS02770 PF07549 SecD/SecF GG Motif GPY00_RS02770 PF02355 Protein export membrane protein GPY00_RS02775 PF02699 Preprotein translocase subunit GPY00_RS02780 PF01702 Queuine tRNA-ribosyltransferase GPY00_RS02785 PF02547 Queuosine biosynthesis protein GPY00_RS02790 PF00571 CBS domain GPY00_RS02795 PF00463 Isocitrate lyase family GPY00_RS02800 PF01274 Malate synthase GPY00_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS02805 PF03466 LysR substrate binding domain GPY00_RS02810 PF00578 AhpC/TSA family GPY00_RS02810 PF10417 C-terminal domain of 1-Cys peroxiredoxin GPY00_RS02815 PF03932 CutC family GPY00_RS02820 PF03976 Polyphosphate kinase 2 (PPK2) GPY00_RS02825 PF01895 PhoU domain GPY00_RS02830 PF00005 ABC transporter GPY00_RS02835 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS02840 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS02845 PF13090 Polyphosphate kinase C-terminal domain 2 GPY00_RS02845 PF02503 Polyphosphate kinase middle domain GPY00_RS02845 PF17941 Polyphosphate kinase C-terminal domain 1 GPY00_RS02845 PF13089 Polyphosphate kinase N-terminal domain GPY00_RS02850 PF02541 Ppx/GppA phosphatase family GPY00_RS02855 PF12849 PBP superfamily domain GPY00_RS02860 PF00989 PAS fold GPY00_RS02860 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS02860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS02860 PF11808 Phosphate regulon sensor protein PhoR GPY00_RS02865 PF00072 Response regulator receiver domain GPY00_RS02865 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS02870 PF04381 Putative exonuclease, RdgC GPY00_RS02880 PF00037 4Fe-4S binding domain GPY00_RS02885 PF00881 Nitroreductase family GPY00_RS02925 PF00004 ATPase family associated with various cellular activities (AAA) GPY00_RS02925 PF07724 AAA domain (Cdc48 subfamily) GPY00_RS02925 PF10431 C-terminal, D2-small domain, of ClpB protein GPY00_RS02925 PF17871 AAA lid domain GPY00_RS02925 PF02861 Clp amino terminal domain, pathogenicity island component GPY00_RS02935 PF00849 RNA pseudouridylate synthase GPY00_RS02935 PF01479 S4 domain GPY00_RS02940 PF13525 Outer membrane lipoprotein GPY00_RS02945 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GPY00_RS02950 PF01609 Transposase DDE domain GPY00_RS02950 PF13006 Insertion element 4 transposase N-terminal GPY00_RS02955 PF01817 Chorismate mutase type II GPY00_RS02955 PF00800 Prephenate dehydratase GPY00_RS02960 PF13416 Bacterial extracellular solute-binding protein GPY00_RS02965 PF00563 EAL domain GPY00_RS02965 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS02970 PF01931 Protein of unknown function DUF84 GPY00_RS02975 PF01371 Trp repressor protein GPY00_RS02980 PF14718 Soluble lytic murein transglycosylase L domain GPY00_RS02980 PF01464 Transglycosylase SLT domain GPY00_RS02985 PF12848 ABC transporter GPY00_RS02985 PF00005 ABC transporter GPY00_RS02990 PF07238 PilZ domain GPY00_RS02995 PF01817 Chorismate mutase type II GPY00_RS02995 PF02153 Prephenate dehydrogenase GPY00_RS03000 PF00793 DAHP synthetase I family GPY00_RS03005 PF07694 5TMR of 5TMR-LYT GPY00_RS03005 PF06580 Histidine kinase GPY00_RS03010 PF04397 LytTr DNA-binding domain GPY00_RS03010 PF00072 Response regulator receiver domain GPY00_RS03015 PF00933 Glycosyl hydrolase family 3 N terminal domain GPY00_RS03020 PF03702 Anhydro-N-acetylmuramic acid kinase GPY00_RS03025 PF13580 SIS domain GPY00_RS03040 PF02554 Carbon starvation protein CstA GPY00_RS03045 PF02401 LytB protein GPY00_RS03050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY00_RS03055 PF01252 Signal peptidase (SPase) II GPY00_RS03060 PF08264 Anticodon-binding domain of tRNA GPY00_RS03060 PF00133 tRNA synthetases class I (I, L, M and V) GPY00_RS03060 PF06827 Zinc finger found in FPG and IleRS GPY00_RS03065 PF06574 FAD synthetase GPY00_RS03065 PF01687 Riboflavin kinase GPY00_RS03070 PF03023 Lipid II flippase MurJ GPY00_RS03075 PF01649 Ribosomal protein S20 GPY00_RS03080 PF01022 Bacterial regulatory protein, arsR family GPY00_RS03085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS03085 PF03466 LysR substrate binding domain GPY00_RS03090 PF02690 Na+/Pi-cotransporter GPY00_RS03095 PF13006 Insertion element 4 transposase N-terminal GPY00_RS03095 PF01609 Transposase DDE domain GPY00_RS03100 PF00303 Thymidylate synthase GPY00_RS03105 PF01790 Prolipoprotein diacylglyceryl transferase GPY00_RS03110 PF01925 Sulfite exporter TauE/SafE GPY00_RS03115 PF02896 PEP-utilising enzyme, TIM barrel domain GPY00_RS03115 PF00391 PEP-utilising enzyme, mobile domain GPY00_RS03115 PF05524 PEP-utilising enzyme, N-terminal GPY00_RS03115 PF01590 GAF domain GPY00_RS03120 PF00293 NUDIX domain GPY00_RS03125 PF02976 DNA mismatch repair enzyme MutH GPY00_RS03130 PF00248 Aldo/keto reductase family GPY00_RS03145 PF02954 Bacterial regulatory protein, Fis family GPY00_RS03145 PF00072 Response regulator receiver domain GPY00_RS03145 PF00158 Sigma-54 interaction domain GPY00_RS03150 PF01336 OB-fold nucleic acid binding domain GPY00_RS03150 PF00152 tRNA synthetases class II (D, K and N) GPY00_RS03160 PF05525 Branched-chain amino acid transport protein GPY00_RS03165 PF05175 Methyltransferase small domain GPY00_RS03170 PF00270 DEAD/DEAH box helicase GPY00_RS03170 PF00271 Helicase conserved C-terminal domain GPY00_RS03175 PF03144 Elongation factor Tu domain 2 GPY00_RS03175 PF16658 Class II release factor RF3, C-terminal domain GPY00_RS03175 PF00009 Elongation factor Tu GTP binding domain GPY00_RS03180 PF00563 EAL domain GPY00_RS03180 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS03180 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS03200 PF13508 Acetyltransferase (GNAT) domain GPY00_RS03210 PF00563 EAL domain GPY00_RS03210 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS03210 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS03235 PF13006 Insertion element 4 transposase N-terminal GPY00_RS03235 PF01609 Transposase DDE domain GPY00_RS03240 PF13181 Tetratricopeptide repeat GPY00_RS03240 PF07719 Tetratricopeptide repeat GPY00_RS03245 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GPY00_RS03245 PF01138 3' exoribonuclease family, domain 1 GPY00_RS03245 PF03725 3' exoribonuclease family, domain 2 GPY00_RS03245 PF00013 KH domain GPY00_RS03245 PF00575 S1 RNA binding domain GPY00_RS03250 PF00312 Ribosomal protein S15 GPY00_RS03255 PF09157 Pseudouridine synthase II TruB, C-terminal GPY00_RS03255 PF01509 TruB family pseudouridylate synthase (N terminal domain) GPY00_RS03255 PF16198 tRNA pseudouridylate synthase B C-terminal domain GPY00_RS03260 PF02033 Ribosome-binding factor A GPY00_RS03265 PF04760 Translation initiation factor IF-2, N-terminal region GPY00_RS03265 PF08364 Bacterial translation initiation factor IF-2 associated region GPY00_RS03265 PF00009 Elongation factor Tu GTP binding domain GPY00_RS03265 PF11987 Translation-initiation factor 2 GPY00_RS03270 PF13184 NusA-like KH domain GPY00_RS03270 PF08529 NusA N-terminal domain GPY00_RS03270 PF00575 S1 RNA binding domain GPY00_RS03275 PF02576 RimP N-terminal domain GPY00_RS03275 PF17384 RimP C-terminal SH3 domain GPY00_RS03290 PF03840 Preprotein translocase SecG subunit GPY00_RS03295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY00_RS03295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY00_RS03295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY00_RS03295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY00_RS03300 PF00809 Pterin binding enzyme GPY00_RS03305 PF01434 Peptidase family M41 GPY00_RS03305 PF06480 FtsH Extracellular GPY00_RS03305 PF17862 AAA+ lid domain GPY00_RS03305 PF00004 ATPase family associated with various cellular activities (AAA) GPY00_RS03310 PF01728 FtsJ-like methyltransferase GPY00_RS03315 PF01985 CRS1 / YhbY (CRM) domain GPY00_RS03320 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY00_RS03320 PF03449 Transcription elongation factor, N-terminal GPY00_RS03325 PF13609 Gram-negative porin GPY00_RS03330 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GPY00_RS03335 PF01479 S4 domain GPY00_RS03335 PF00579 tRNA synthetases class I (W and Y) GPY00_RS03340 PF04225 Opacity-associated protein A LysM-like domain GPY00_RS03340 PF01551 Peptidase family M23 GPY00_RS03345 PF00873 AcrB/AcrD/AcrF family GPY00_RS03355 PF01521 Iron-sulphur cluster biosynthesis GPY00_RS03360 PF00202 Aminotransferase class-III GPY00_RS03370 PF01594 AI-2E family transporter GPY00_RS03375 PF08468 Methyltransferase small domain N-terminal GPY00_RS03375 PF05175 Methyltransferase small domain GPY00_RS03380 PF09308 LuxQ, periplasmic GPY00_RS03380 PF00072 Response regulator receiver domain GPY00_RS03380 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS03380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS03385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY00_RS03390 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS03395 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY00_RS03395 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS03400 PF00005 ABC transporter GPY00_RS03400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY00_RS03405 PF00005 ABC transporter GPY00_RS03405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY00_RS03415 PF01869 BadF/BadG/BcrA/BcrD ATPase family GPY00_RS03420 PF02838 Glycosyl hydrolase family 20, domain 2 GPY00_RS03420 PF00728 Glycosyl hydrolase family 20, catalytic domain GPY00_RS03425 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GPY00_RS03425 PF06165 Glycosyltransferase family 36 GPY00_RS03430 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY00_RS03430 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY00_RS03430 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY00_RS03430 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY00_RS03435 PF00005 ABC transporter GPY00_RS03435 PF08402 TOBE domain GPY00_RS03445 PF13416 Bacterial extracellular solute-binding protein GPY00_RS03450 PF00909 Ammonium Transporter Family GPY00_RS03455 PF00543 Nitrogen regulatory protein P-II GPY00_RS03460 PF06062 Uncharacterised protein family (UPF0231) GPY00_RS03465 PF11791 Aconitate B N-terminal domain GPY00_RS03465 PF06434 Aconitate hydratase 2 N-terminus GPY00_RS03465 PF00330 Aconitase family (aconitate hydratase) GPY00_RS03470 PF01734 Patatin-like phospholipase GPY00_RS03475 PF14814 Bifunctional transglycosylase second domain GPY00_RS03475 PF00905 Penicillin binding protein transpeptidase domain GPY00_RS03475 PF00912 Transglycosylase GPY00_RS03480 PF04408 Helicase associated domain (HA2) GPY00_RS03480 PF00271 Helicase conserved C-terminal domain GPY00_RS03480 PF08482 ATP-dependent helicase C-terminal GPY00_RS03480 PF00270 DEAD/DEAH box helicase GPY00_RS03490 PF17746 SfsA N-terminal OB domain GPY00_RS03490 PF03749 Sugar fermentation stimulation protein RE domain GPY00_RS03495 PF01258 Prokaryotic dksA/traR C4-type zinc finger GPY00_RS03500 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY00_RS03505 PF12627 Probable RNA and SrmB- binding site of polymerase A GPY00_RS03505 PF12626 Polymerase A arginine-rich C-terminus GPY00_RS03505 PF01743 Poly A polymerase head domain GPY00_RS03510 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GPY00_RS03515 PF02548 Ketopantoate hydroxymethyltransferase GPY00_RS03520 PF02569 Pantoate-beta-alanine ligase GPY00_RS03525 PF01061 ABC-2 type transporter GPY00_RS03530 PF00005 ABC transporter GPY00_RS03535 PF00916 Sulfate permease family GPY00_RS03535 PF01740 STAS domain GPY00_RS03540 PF00484 Carbonic anhydrase GPY00_RS03545 PF00156 Phosphoribosyl transferase domain GPY00_RS03550 PF00440 Bacterial regulatory proteins, tetR family GPY00_RS03555 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY00_RS03560 PF04348 LppC putative lipoprotein GPY00_RS03565 PF02021 Uncharacterised protein family UPF0102 GPY00_RS03570 PF13580 SIS domain GPY00_RS03575 PF04972 BON domain GPY00_RS03580 PF04386 Stringent starvation protein B GPY00_RS03585 PF02798 Glutathione S-transferase, N-terminal domain GPY00_RS03585 PF00043 Glutathione S-transferase, C-terminal domain GPY00_RS03590 PF02167 Cytochrome C1 family GPY00_RS03595 PF00032 Cytochrome b(C-terminal)/b6/petD GPY00_RS03595 PF00033 Cytochrome b/b6/petB GPY00_RS03600 PF00355 Rieske [2Fe-2S] domain GPY00_RS03600 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GPY00_RS03605 PF00380 Ribosomal protein S9/S16 GPY00_RS03610 PF00572 Ribosomal protein L13 GPY00_RS03615 PF03969 AFG1-like ATPase GPY00_RS03625 PF00595 PDZ domain GPY00_RS03630 PF13180 PDZ domain GPY00_RS03635 PF01245 Ribosomal protein L19 GPY00_RS03640 PF01746 tRNA (Guanine-1)-methyltransferase GPY00_RS03645 PF05239 PRC-barrel domain GPY00_RS03645 PF01782 RimM N-terminal domain GPY00_RS03650 PF00886 Ribosomal protein S16 GPY00_RS03655 PF00448 SRP54-type protein, GTPase domain GPY00_RS03655 PF02978 Signal peptide binding domain GPY00_RS03655 PF02881 SRP54-type protein, helical bundle domain GPY00_RS03660 PF01578 Cytochrome C assembly protein GPY00_RS03665 PF01595 Cyclin M transmembrane N-terminal domain GPY00_RS03665 PF00571 CBS domain GPY00_RS03665 PF03471 Transporter associated domain GPY00_RS03670 PF02664 S-Ribosylhomocysteinase (LuxS) GPY00_RS03675 PF04262 Glutamate-cysteine ligase GPY00_RS03680 PF00675 Insulinase (Peptidase family M16) GPY00_RS03680 PF05193 Peptidase M16 inactive domain GPY00_RS03685 PF09335 SNARE associated Golgi protein GPY00_RS03695 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GPY00_RS03700 PF02436 Conserved carboxylase domain GPY00_RS03700 PF00364 Biotin-requiring enzyme GPY00_RS03700 PF00682 HMGL-like GPY00_RS03705 PF04277 Oxaloacetate decarboxylase, gamma chain GPY00_RS03745 PF02599 Global regulator protein family GPY00_RS03750 PF01842 ACT domain GPY00_RS03750 PF00696 Amino acid kinase family GPY00_RS03750 PF13840 ACT domain GPY00_RS03755 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY00_RS03755 PF01411 tRNA synthetases class II (A) GPY00_RS03755 PF02272 DHHA1 domain GPY00_RS03760 PF02631 RecX family GPY00_RS03765 PF00154 recA bacterial DNA recombination protein GPY00_RS03770 PF02464 Competence-damaged protein GPY00_RS03775 PF00005 ABC transporter GPY00_RS03775 PF12857 TOBE-like domain GPY00_RS03780 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS03785 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS03795 PF00291 Pyridoxal-phosphate dependent enzyme GPY00_RS03800 PF00488 MutS domain V GPY00_RS03800 PF05190 MutS family domain IV GPY00_RS03800 PF05192 MutS domain III GPY00_RS03800 PF05188 MutS domain II GPY00_RS03800 PF01624 MutS domain I GPY00_RS03805 PF00140 Sigma-70 factor, region 1.2 GPY00_RS03805 PF04545 Sigma-70, region 4 GPY00_RS03805 PF04539 Sigma-70 region 3 GPY00_RS03805 PF04542 Sigma-70 region 2 GPY00_RS03810 PF01476 LysM domain GPY00_RS03810 PF01551 Peptidase family M23 GPY00_RS03820 PF01975 Survival protein SurE GPY00_RS03825 PF01142 tRNA pseudouridine synthase D (TruD) GPY00_RS03830 PF02542 YgbB family GPY00_RS03835 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GPY00_RS03840 PF04977 Septum formation initiator GPY00_RS03845 PF02673 Bacitracin resistance protein BacA GPY00_RS03850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GPY00_RS03855 PF02152 Dihydroneopterin aldolase GPY00_RS03860 PF02660 Glycerol-3-phosphate acyltransferase GPY00_RS03865 PF00561 alpha/beta hydrolase fold GPY00_RS03870 PF00814 Glycoprotease family GPY00_RS03875 PF01165 Ribosomal protein S21 GPY00_RS03880 PF09424 Yqey-like protein GPY00_RS03885 PF08275 DNA primase catalytic core, N-terminal domain GPY00_RS03885 PF01807 CHC2 zinc finger GPY00_RS03885 PF10410 DnaB-helicase binding domain of primase GPY00_RS03885 PF08278 DNA primase DnaG DnaB-binding GPY00_RS03890 PF04545 Sigma-70, region 4 GPY00_RS03890 PF04539 Sigma-70 region 3 GPY00_RS03890 PF04542 Sigma-70 region 2 GPY00_RS03890 PF03979 Sigma-70 factor, region 1.1 GPY00_RS03890 PF04546 Sigma-70, non-essential region GPY00_RS03890 PF00140 Sigma-70 factor, region 1.2 GPY00_RS03900 PF00589 Phage integrase family GPY00_RS03900 PF13356 Arm DNA-binding domain GPY00_RS03950 PF06803 Protein of unknown function (DUF1232) GPY00_RS03965 PF04002 RadC-like JAB domain GPY00_RS04045 PF07478 D-ala D-ala ligase C-terminus GPY00_RS04045 PF01820 D-ala D-ala ligase N-terminus GPY00_RS04100 PF04717 Type VI secretion system, phage-baseplate injector GPY00_RS04115 PF12833 Helix-turn-helix domain GPY00_RS04115 PF17853 GGDEF-like domain GPY00_RS04130 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY00_RS04135 PF01380 SIS domain GPY00_RS04140 PF00455 DeoR C terminal sensor domain GPY00_RS04140 PF08220 DeoR-like helix-turn-helix domain GPY00_RS04145 PF00224 Pyruvate kinase, barrel domain GPY00_RS04145 PF02887 Pyruvate kinase, alpha/beta domain GPY00_RS04150 PF04402 Protein of unknown function (DUF541) GPY00_RS04155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS04155 PF03466 LysR substrate binding domain GPY00_RS04160 PF01810 LysE type translocator GPY00_RS04165 PF05552 Conserved TM helix GPY00_RS04165 PF00924 Mechanosensitive ion channel GPY00_RS04175 PF01116 Fructose-bisphosphate aldolase class-II GPY00_RS04180 PF00162 Phosphoglycerate kinase GPY00_RS04185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY00_RS04185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY00_RS04190 PF07715 TonB-dependent Receptor Plug Domain GPY00_RS04190 PF00593 TonB dependent receptor GPY00_RS04195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS04195 PF03466 LysR substrate binding domain GPY00_RS04200 PF00456 Transketolase, thiamine diphosphate binding domain GPY00_RS04200 PF02779 Transketolase, pyrimidine binding domain GPY00_RS04200 PF02780 Transketolase, C-terminal domain GPY00_RS04205 PF00438 S-adenosylmethionine synthetase, N-terminal domain GPY00_RS04205 PF02773 S-adenosylmethionine synthetase, C-terminal domain GPY00_RS04205 PF02772 S-adenosylmethionine synthetase, central domain GPY00_RS04210 PF10263 SprT-like family GPY00_RS04210 PF17283 SprT-like zinc ribbon domain GPY00_RS04215 PF04231 Endonuclease I GPY00_RS04220 PF04452 RNA methyltransferase GPY00_RS04225 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GPY00_RS04225 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GPY00_RS04230 PF02622 Uncharacterized ACR, COG1678 GPY00_RS04235 PF03652 Holliday junction resolvase GPY00_RS04240 PF00579 tRNA synthetases class I (W and Y) GPY00_RS04240 PF01479 S4 domain GPY00_RS04250 PF00437 Type II/IV secretion system protein GPY00_RS04255 PF00437 Type II/IV secretion system protein GPY00_RS04260 PF01168 Alanine racemase, N-terminal domain GPY00_RS04265 PF03807 NADP oxidoreductase coenzyme F420-dependent GPY00_RS04265 PF14748 Pyrroline-5-carboxylate reductase dimerisation GPY00_RS04270 PF02325 YGGT family GPY00_RS04275 PF02594 Uncharacterised ACR, YggU family COG1872 GPY00_RS04285 PF01725 Ham1 family GPY00_RS04290 PF04055 Radical SAM superfamily GPY00_RS04290 PF06969 HemN C-terminal domain GPY00_RS04295 PF04960 Glutaminase GPY00_RS04300 PF02390 Putative methyltransferase GPY00_RS04305 PF00633 Helix-hairpin-helix motif GPY00_RS04305 PF10576 Iron-sulfur binding domain of endonuclease III GPY00_RS04305 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY00_RS04305 PF14815 NUDIX domain GPY00_RS04310 PF04362 Bacterial Fe(2+) trafficking GPY00_RS04315 PF01464 Transglycosylase SLT domain GPY00_RS04315 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GPY00_RS04340 PF12729 Four helix bundle sensory module for signal transduction GPY00_RS04340 PF00672 HAMP domain GPY00_RS04340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS04370 PF00226 DnaJ domain GPY00_RS04370 PF05099 Tellurite resistance protein TerB GPY00_RS04375 PF03968 OstA-like protein GPY00_RS04375 PF04453 LPS transport system D GPY00_RS04380 PF09312 SurA N-terminal domain GPY00_RS04385 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GPY00_RS04390 PF00398 Ribosomal RNA adenine dimethylase GPY00_RS04395 PF04379 ApaG domain GPY00_RS04400 PF00149 Calcineurin-like phosphoesterase GPY00_RS04405 PF00186 Dihydrofolate reductase GPY00_RS04410 PF12821 Threonine/Serine exporter, ThrE GPY00_RS04415 PF06738 Putative threonine/serine exporter GPY00_RS04420 PF01926 50S ribosome-binding GTPase GPY00_RS04420 PF01018 GTP1/OBG GPY00_RS04425 PF01016 Ribosomal L27 protein GPY00_RS04430 PF00829 Ribosomal prokaryotic L21 protein GPY00_RS04435 PF00348 Polyprenyl synthetase GPY00_RS04440 PF13520 Amino acid permease GPY00_RS04445 PF00056 lactate/malate dehydrogenase, NAD binding domain GPY00_RS04445 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GPY00_RS04450 PF02863 Arginine repressor, C-terminal domain GPY00_RS04450 PF01316 Arginine repressor, DNA binding domain GPY00_RS04455 PF16868 NMT1-like family GPY00_RS04465 PF00582 Universal stress protein family GPY00_RS04480 PF06877 Regulator of ribonuclease activity B GPY00_RS04490 PF01523 Putative modulator of DNA gyrase GPY00_RS04495 PF00795 Carbon-nitrogen hydrolase GPY00_RS04500 PF13502 AsmA-like C-terminal region GPY00_RS04500 PF13116 Protein of unknown function GPY00_RS04505 PF00575 S1 RNA binding domain GPY00_RS04505 PF10150 Ribonuclease E/G family GPY00_RS04510 PF02545 Maf-like protein GPY00_RS04515 PF04093 rod shape-determining protein MreD GPY00_RS04520 PF04085 rod shape-determining protein MreC GPY00_RS04560 PF07963 Prokaryotic N-terminal methylation motif GPY00_RS04560 PF00114 Pilin (bacterial filament) GPY00_RS04570 PF00482 Type II secretion system (T2SS), protein F GPY00_RS04575 PF00437 Type II/IV secretion system protein GPY00_RS04585 PF01471 Putative peptidoglycan binding domain GPY00_RS04585 PF13401 AAA domain GPY00_RS04590 PF00263 Bacterial type II and III secretion system protein GPY00_RS04590 PF03958 Bacterial type II/III secretion system short domain GPY00_RS04610 PF00563 EAL domain GPY00_RS04610 PF17157 Gammaproteobacterial periplasmic sensor domain GPY00_RS04610 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS04615 PF00436 Single-strand binding protein family GPY00_RS04620 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS04625 PF00483 Nucleotidyl transferase GPY00_RS04630 PF17760 UvrA interaction domain GPY00_RS04630 PF00005 ABC transporter GPY00_RS04630 PF17755 UvrA DNA-binding domain GPY00_RS04640 PF00266 Aminotransferase class-V GPY00_RS04645 PF00696 Amino acid kinase family GPY00_RS04645 PF01842 ACT domain GPY00_RS04650 PF02310 B12 binding domain GPY00_RS04650 PF02574 Homocysteine S-methyltransferase GPY00_RS04650 PF00809 Pterin binding enzyme GPY00_RS04650 PF02965 Vitamin B12 dependent methionine synthase, activation domain GPY00_RS04650 PF02607 B12 binding domain GPY00_RS04655 PF00999 Sodium/hydrogen exchanger family GPY00_RS04720 PF01507 Phosphoadenosine phosphosulfate reductase family GPY00_RS04725 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GPY00_RS04725 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GPY00_RS04730 PF00175 Oxidoreductase NAD-binding domain GPY00_RS04730 PF00667 FAD binding domain GPY00_RS04730 PF00258 Flavodoxin GPY00_RS04750 PF09583 Phage shock protein G (Phageshock_PspG) GPY00_RS04755 PF01207 Dihydrouridine synthase (Dus) GPY00_RS04760 PF01475 Ferric uptake regulator family GPY00_RS04770 PF12706 Beta-lactamase superfamily domain GPY00_RS04775 PF00342 Phosphoglucose isomerase GPY00_RS04780 PF01894 Uncharacterised protein family UPF0047 GPY00_RS04785 PF01168 Alanine racemase, N-terminal domain GPY00_RS04785 PF00842 Alanine racemase, C-terminal domain GPY00_RS04790 PF03796 DnaB-like helicase C terminal domain GPY00_RS04790 PF00772 DnaB-like helicase N terminal domain GPY00_RS04800 PF01797 Transposase IS200 like GPY00_RS04805 PF01281 Ribosomal protein L9, N-terminal domain GPY00_RS04805 PF03948 Ribosomal protein L9, C-terminal domain GPY00_RS04810 PF01084 Ribosomal protein S18 GPY00_RS04815 PF00436 Single-strand binding protein family GPY00_RS04820 PF01250 Ribosomal protein S6 GPY00_RS04825 PF00210 Ferritin-like domain GPY00_RS04830 PF04324 BFD-like [2Fe-2S] binding domain GPY00_RS04835 PF03143 Elongation factor Tu C-terminal domain GPY00_RS04835 PF03144 Elongation factor Tu domain 2 GPY00_RS04835 PF00009 Elongation factor Tu GTP binding domain GPY00_RS04840 PF03144 Elongation factor Tu domain 2 GPY00_RS04840 PF00009 Elongation factor Tu GTP binding domain GPY00_RS04840 PF00679 Elongation factor G C-terminus GPY00_RS04840 PF03764 Elongation factor G, domain IV GPY00_RS04840 PF14492 Elongation Factor G, domain II GPY00_RS04845 PF00177 Ribosomal protein S7p/S5e GPY00_RS04850 PF00164 Ribosomal protein S12/S23 GPY00_RS04860 PF02635 DsrE/DsrF-like family GPY00_RS04865 PF02635 DsrE/DsrF-like family GPY00_RS04870 PF13309 HTH domain GPY00_RS04870 PF08348 YheO-like PAS domain GPY00_RS04875 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY00_RS04875 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY00_RS04885 PF04102 SlyX GPY00_RS04890 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GPY00_RS04895 PF01145 SPFH domain / Band 7 family GPY00_RS04900 PF12221 Bacterial membrane protein N terminal GPY00_RS04900 PF01145 SPFH domain / Band 7 family GPY00_RS04905 PF13167 GTP-binding GTPase N-terminal GPY00_RS04905 PF01926 50S ribosome-binding GTPase GPY00_RS04905 PF16360 GTP-binding GTPase Middle Region GPY00_RS04910 PF17209 Hfq protein GPY00_RS04920 PF01119 DNA mismatch repair protein, C-terminal domain GPY00_RS04920 PF08676 MutL C terminal dimerisation domain GPY00_RS04925 PF01520 N-acetylmuramoyl-L-alanine amidase GPY00_RS04930 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GPY00_RS04935 PF08331 Domain of unknown function (DUF1730) GPY00_RS04995 PF00929 Exonuclease GPY00_RS05000 PF03193 RsgA GTPase GPY00_RS05005 PF02666 Phosphatidylserine decarboxylase GPY00_RS05010 PF00939 Sodium:sulfate symporter transmembrane region GPY00_RS05020 PF01676 Metalloenzyme superfamily GPY00_RS05020 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GPY00_RS05025 PF01551 Peptidase family M23 GPY00_RS05035 PF08360 QacR-like protein, C-terminal region GPY00_RS05035 PF00440 Bacterial regulatory proteins, tetR family GPY00_RS05040 PF01208 Uroporphyrinogen decarboxylase (URO-D) GPY00_RS05045 PF09297 NADH pyrophosphatase zinc ribbon domain GPY00_RS05045 PF00293 NUDIX domain GPY00_RS05050 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GPY00_RS05055 PF04998 RNA polymerase Rpb1, domain 5 GPY00_RS05055 PF04983 RNA polymerase Rpb1, domain 3 GPY00_RS05055 PF00623 RNA polymerase Rpb1, domain 2 GPY00_RS05055 PF04997 RNA polymerase Rpb1, domain 1 GPY00_RS05055 PF05000 RNA polymerase Rpb1, domain 4 GPY00_RS05060 PF04560 RNA polymerase Rpb2, domain 7 GPY00_RS05060 PF04563 RNA polymerase beta subunit GPY00_RS05060 PF04561 RNA polymerase Rpb2, domain 2 GPY00_RS05060 PF04565 RNA polymerase Rpb2, domain 3 GPY00_RS05060 PF00562 RNA polymerase Rpb2, domain 6 GPY00_RS05060 PF10385 RNA polymerase beta subunit external 1 domain GPY00_RS05065 PF00542 Ribosomal protein L7/L12 C-terminal domain GPY00_RS05065 PF16320 Ribosomal protein L7/L12 dimerisation domain GPY00_RS05070 PF00466 Ribosomal protein L10 GPY00_RS05075 PF00687 Ribosomal protein L1p/L10e family GPY00_RS05080 PF00298 Ribosomal protein L11, RNA binding domain GPY00_RS05080 PF03946 Ribosomal protein L11, N-terminal domain GPY00_RS05085 PF00467 KOW motif GPY00_RS05085 PF02357 Transcription termination factor nusG GPY00_RS05090 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GPY00_RS05095 PF03143 Elongation factor Tu C-terminal domain GPY00_RS05095 PF03144 Elongation factor Tu domain 2 GPY00_RS05095 PF00009 Elongation factor Tu GTP binding domain GPY00_RS05120 PF00485 Phosphoribulokinase / Uridine kinase family GPY00_RS05125 PF08279 HTH domain GPY00_RS05125 PF03099 Biotin/lipoate A/B protein ligase family GPY00_RS05125 PF02237 Biotin protein ligase C terminal domain GPY00_RS05130 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GPY00_RS05130 PF01565 FAD binding domain GPY00_RS05140 PF13091 PLD-like domain GPY00_RS05170 PF00175 Oxidoreductase NAD-binding domain GPY00_RS05175 PF00175 Oxidoreductase NAD-binding domain GPY00_RS05175 PF00970 Oxidoreductase FAD-binding domain GPY00_RS05175 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY00_RS05180 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GPY00_RS05190 PF07497 Rho termination factor, RNA-binding domain GPY00_RS05190 PF07498 Rho termination factor, N-terminal domain GPY00_RS05190 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY00_RS05195 PF00085 Thioredoxin GPY00_RS05200 PF00270 DEAD/DEAH box helicase GPY00_RS05200 PF00271 Helicase conserved C-terminal domain GPY00_RS05205 PF02541 Ppx/GppA phosphatase family GPY00_RS05210 PF00072 Response regulator receiver domain GPY00_RS05210 PF09456 RcsC Alpha-Beta-Loop (ABL) GPY00_RS05210 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS05215 PF12832 MFS_1 like family GPY00_RS05235 PF13193 AMP-binding enzyme C-terminal domain GPY00_RS05235 PF00501 AMP-binding enzyme GPY00_RS05235 PF16177 Acetyl-coenzyme A synthetase N-terminus GPY00_RS05240 PF01220 Dehydroquinase class II GPY00_RS05245 PF00364 Biotin-requiring enzyme GPY00_RS05250 PF00289 Biotin carboxylase, N-terminal domain GPY00_RS05250 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GPY00_RS05250 PF02785 Biotin carboxylase C-terminal domain GPY00_RS05260 PF01207 Dihydrouridine synthase (Dus) GPY00_RS05265 PF02954 Bacterial regulatory protein, Fis family GPY00_RS05270 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS05270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY00_RS05275 PF00920 Dehydratase family GPY00_RS05280 PF01202 Shikimate kinase GPY00_RS05285 PF02447 GntP family permease GPY00_RS05290 PF01081 KDPG and KHG aldolase GPY00_RS05295 PF00593 TonB dependent receptor GPY00_RS05295 PF07715 TonB-dependent Receptor Plug Domain GPY00_RS05310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS05310 PF17200 Single Cache domain 2 GPY00_RS05310 PF00672 HAMP domain GPY00_RS05315 PF01276 Orn/Lys/Arg decarboxylase, major domain GPY00_RS05315 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GPY00_RS05315 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GPY00_RS05320 PF13520 Amino acid permease GPY00_RS05325 PF18500 CadC C-terminal domain 1 GPY00_RS05325 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS05330 PF13411 MerR HTH family regulatory protein GPY00_RS05340 PF02142 MGS-like domain GPY00_RS05340 PF01808 AICARFT/IMPCHase bienzyme GPY00_RS05345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GPY00_RS05345 PF02844 Phosphoribosylglycinamide synthetase, N domain GPY00_RS05345 PF02843 Phosphoribosylglycinamide synthetase, C domain GPY00_RS05350 PF13006 Insertion element 4 transposase N-terminal GPY00_RS05350 PF01609 Transposase DDE domain GPY00_RS05360 PF00216 Bacterial DNA-binding protein GPY00_RS05365 PF00571 CBS domain GPY00_RS05365 PF01595 Cyclin M transmembrane N-terminal domain GPY00_RS05375 PF04222 Protein of unknown function (DUF416) GPY00_RS05385 PF03167 Uracil DNA glycosylase superfamily GPY00_RS05390 PF00924 Mechanosensitive ion channel GPY00_RS05400 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GPY00_RS05400 PF10996 Beta-Casp domain GPY00_RS05400 PF00753 Metallo-beta-lactamase superfamily GPY00_RS05410 PF02719 Polysaccharide biosynthesis protein GPY00_RS05415 PF01370 NAD dependent epimerase/dehydratase family GPY00_RS05420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GPY00_RS05420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GPY00_RS05425 PF02397 Bacterial sugar transferase GPY00_RS05430 PF01370 NAD dependent epimerase/dehydratase family GPY00_RS05435 PF13477 Glycosyl transferase 4-like GPY00_RS05435 PF00534 Glycosyl transferases group 1 GPY00_RS05440 PF13439 Glycosyltransferase Family 4 GPY00_RS05440 PF00534 Glycosyl transferases group 1 GPY00_RS05450 PF00534 Glycosyl transferases group 1 GPY00_RS05455 PF00733 Asparagine synthase GPY00_RS05455 PF13537 Glutamine amidotransferase domain GPY00_RS05470 PF01943 Polysaccharide biosynthesis protein GPY00_RS05470 PF14667 Polysaccharide biosynthesis C-terminal domain GPY00_RS05475 PF00483 Nucleotidyl transferase GPY00_RS05480 PF07722 Peptidase C26 GPY00_RS05485 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GPY00_RS05485 PF00391 PEP-utilising enzyme, mobile domain GPY00_RS05495 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GPY00_RS05500 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS05505 PF05523 WxcM-like, C-terminal GPY00_RS05510 PF00483 Nucleotidyl transferase GPY00_RS05515 PF16363 GDP-mannose 4,6 dehydratase GPY00_RS05540 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF GPY00_RS05550 PF06082 Exopolysaccharide biosynthesis protein YbjH GPY00_RS05560 PF01370 NAD dependent epimerase/dehydratase family GPY00_RS05565 PF01522 Polysaccharide deacetylase GPY00_RS05565 PF00457 Glycosyl hydrolases family 11 GPY00_RS05585 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY00_RS05590 PF04488 Glycosyltransferase sugar-binding region containing DXD motif GPY00_RS05595 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GPY00_RS05620 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS05625 PF01757 Acyltransferase family GPY00_RS05635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY00_RS05640 PF00535 Glycosyl transferase family 2 GPY00_RS05645 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY00_RS05650 PF01467 Cytidylyltransferase-like GPY00_RS05655 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GPY00_RS05655 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GPY00_RS05655 PF06827 Zinc finger found in FPG and IleRS GPY00_RS05665 PF00471 Ribosomal protein L33 GPY00_RS05670 PF00830 Ribosomal L28 family GPY00_RS05675 PF04002 RadC-like JAB domain GPY00_RS05680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS05680 PF02743 Cache domain GPY00_RS05680 PF00672 HAMP domain GPY00_RS05685 PF04127 DNA / pantothenate metabolism flavoprotein GPY00_RS05685 PF02441 Flavoprotein GPY00_RS05695 PF00440 Bacterial regulatory proteins, tetR family GPY00_RS05700 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY00_RS05705 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY00_RS05710 PF00156 Phosphoribosyl transferase domain GPY00_RS05715 PF03725 3' exoribonuclease family, domain 2 GPY00_RS05715 PF01138 3' exoribonuclease family, domain 1 GPY00_RS05720 PF08340 Domain of unknown function (DUF1732) GPY00_RS05720 PF03755 YicC-like family, N-terminal region GPY00_RS05725 PF03350 Uncharacterized protein family, UPF0114 GPY00_RS05730 PF01609 Transposase DDE domain GPY00_RS05730 PF13006 Insertion element 4 transposase N-terminal GPY00_RS05735 PF00367 phosphotransferase system, EIIB GPY00_RS05735 PF02378 Phosphotransferase system, EIIC GPY00_RS05740 PF13580 SIS domain GPY00_RS05750 PF01380 SIS domain GPY00_RS05750 PF01418 Helix-turn-helix domain, rpiR family GPY00_RS05755 PF01032 FecCD transport family GPY00_RS05760 PF01497 Periplasmic binding protein GPY00_RS05765 PF00005 ABC transporter GPY00_RS05770 PF07715 TonB-dependent Receptor Plug Domain GPY00_RS05770 PF00593 TonB dependent receptor GPY00_RS05775 PF00664 ABC transporter transmembrane region GPY00_RS05775 PF00005 ABC transporter GPY00_RS05790 PF00570 HRDC domain GPY00_RS05790 PF00271 Helicase conserved C-terminal domain GPY00_RS05790 PF00270 DEAD/DEAH box helicase GPY00_RS05790 PF09382 RQC domain GPY00_RS05790 PF16124 RecQ zinc-binding GPY00_RS05795 PF00892 EamA-like transporter family GPY00_RS05805 PF12833 Helix-turn-helix domain GPY00_RS05810 PF01810 LysE type translocator GPY00_RS05815 PF00580 UvrD/REP helicase N-terminal domain GPY00_RS05815 PF13361 UvrD-like helicase C-terminal domain GPY00_RS05820 PF01432 Peptidase family M3 GPY00_RS05825 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GPY00_RS05830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY00_RS05830 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS05840 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY00_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS05850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY00_RS05855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY00_RS05855 PF00005 ABC transporter GPY00_RS05895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY00_RS05900 PF13361 UvrD-like helicase C-terminal domain GPY00_RS05900 PF00580 UvrD/REP helicase N-terminal domain GPY00_RS05905 PF00440 Bacterial regulatory proteins, tetR family GPY00_RS05910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY00_RS05915 PF00873 AcrB/AcrD/AcrF family GPY00_RS05920 PF04380 Membrane fusogenic activity GPY00_RS05925 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GPY00_RS05925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GPY00_RS05930 PF03466 LysR substrate binding domain GPY00_RS05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS06000 PF12724 Flavodoxin domain GPY00_RS06005 PF02386 Cation transport protein GPY00_RS06010 PF01205 Uncharacterized protein family UPF0029 GPY00_RS06010 PF09186 Domain of unknown function (DUF1949) GPY00_RS06015 PF00378 Enoyl-CoA hydratase/isomerase GPY00_RS06015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GPY00_RS06015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GPY00_RS06020 PF00108 Thiolase, N-terminal domain GPY00_RS06020 PF02803 Thiolase, C-terminal domain GPY00_RS06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS06025 PF03466 LysR substrate binding domain GPY00_RS06030 PF07690 Major Facilitator Superfamily GPY00_RS06035 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS06035 PF12804 MobA-like NTP transferase domain GPY00_RS06040 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GPY00_RS06040 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GPY00_RS06045 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY00_RS06045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY00_RS06050 PF00231 ATP synthase GPY00_RS06055 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY00_RS06055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY00_RS06055 PF00306 ATP synthase alpha/beta chain, C terminal domain GPY00_RS06060 PF00213 ATP synthase delta (OSCP) subunit GPY00_RS06065 PF00430 ATP synthase B/B' CF(0) GPY00_RS06070 PF00137 ATP synthase subunit C GPY00_RS06075 PF00119 ATP synthase A chain GPY00_RS06080 PF03899 ATP synthase I chain GPY00_RS06085 PF02195 ParB-like nuclease domain GPY00_RS06085 PF17762 HTH domain found in ParB protein GPY00_RS06090 PF13614 AAA domain GPY00_RS06095 PF02527 rRNA small subunit methyltransferase G GPY00_RS06100 PF13932 GidA associated domain GPY00_RS06100 PF01134 Glucose inhibited division protein A GPY00_RS06110 PF00258 Flavodoxin GPY00_RS06115 PF01926 50S ribosome-binding GTPase GPY00_RS06115 PF10396 GTP-binding protein TrmE N-terminus GPY00_RS06115 PF12631 MnmE helical domain GPY00_RS06120 PF13006 Insertion element 4 transposase N-terminal GPY00_RS06120 PF01609 Transposase DDE domain GPY00_RS06125 PF14849 YidC periplasmic domain GPY00_RS06125 PF02096 60Kd inner membrane protein GPY00_RS06130 PF01809 Putative membrane protein insertion efficiency factor GPY00_RS06135 PF00825 Ribonuclease P GPY00_RS06140 PF00468 Ribosomal protein L34 GPY00_RS06145 PF00005 ABC transporter GPY00_RS06150 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS06155 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY00_RS06160 PF08299 Bacterial dnaA protein helix-turn-helix GPY00_RS06160 PF11638 DnaA N-terminal domain GPY00_RS06160 PF00308 Bacterial dnaA protein GPY00_RS06165 PF02768 DNA polymerase III beta subunit, C-terminal domain GPY00_RS06165 PF02767 DNA polymerase III beta subunit, central domain GPY00_RS06165 PF00712 DNA polymerase III beta subunit, N-terminal domain GPY00_RS06170 PF02463 RecF/RecN/SMC N terminal domain GPY00_RS06175 PF18053 DNA gyrase B subunit insert domain GPY00_RS06175 PF00204 DNA gyrase B GPY00_RS06175 PF00986 DNA gyrase B subunit, carboxyl terminus GPY00_RS06175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS06175 PF01751 Toprim domain GPY00_RS06190 PF00011 Hsp20/alpha crystallin family GPY00_RS06195 PF00155 Aminotransferase class I and II GPY00_RS06200 PF05746 DALR anticodon binding domain GPY00_RS06200 PF02092 Glycyl-tRNA synthetase beta subunit GPY00_RS06205 PF02091 Glycyl-tRNA synthetase alpha subunit GPY00_RS06210 PF01169 Uncharacterized protein family UPF0016 GPY00_RS06220 PF01206 Sulfurtransferase TusA GPY00_RS06230 PF00107 Zinc-binding dehydrogenase GPY00_RS06230 PF08240 Alcohol dehydrogenase GroES-like domain GPY00_RS06235 PF00291 Pyridoxal-phosphate dependent enzyme GPY00_RS06235 PF00585 C-terminal regulatory domain of Threonine dehydratase GPY00_RS06240 PF00920 Dehydratase family GPY00_RS06245 PF01063 Amino-transferase class IV GPY00_RS06255 PF00205 Thiamine pyrophosphate enzyme, central domain GPY00_RS06255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY00_RS06255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY00_RS06260 PF01078 Magnesium chelatase, subunit ChlI GPY00_RS06260 PF13335 Magnesium chelatase, subunit ChlI C-terminal GPY00_RS06265 PF01553 Acyltransferase GPY00_RS06270 PF01323 DSBA-like thioredoxin domain GPY00_RS06275 PF01636 Phosphotransferase enzyme family GPY00_RS06280 PF13746 4Fe-4S dicluster domain GPY00_RS06280 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GPY00_RS06280 PF12801 4Fe-4S binding domain GPY00_RS06285 PF06288 Protein of unknown function (DUF1040) GPY00_RS06290 PF01609 Transposase DDE domain GPY00_RS06290 PF13006 Insertion element 4 transposase N-terminal GPY00_RS06300 PF07070 SpoOM protein GPY00_RS06305 PF03006 Haemolysin-III related GPY00_RS06315 PF02386 Cation transport protein GPY00_RS06320 PF02254 TrkA-N domain GPY00_RS06320 PF02080 TrkA-C domain GPY00_RS06325 PF01189 16S rRNA methyltransferase RsmB/F GPY00_RS06325 PF01029 NusB family GPY00_RS06330 PF00551 Formyl transferase GPY00_RS06330 PF02911 Formyl transferase, C-terminal domain GPY00_RS06335 PF01327 Polypeptide deformylase GPY00_RS06340 PF01476 LysM domain GPY00_RS06345 PF02481 DNA recombination-mediator protein A GPY00_RS06345 PF17782 DprA winged helix domain GPY00_RS06350 PF04361 Protein of unknown function (DUF494) GPY00_RS06355 PF01396 Topoisomerase DNA binding C4 zinc finger GPY00_RS06360 PF02222 ATP-grasp domain GPY00_RS06360 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GPY00_RS06365 PF00731 AIR carboxylase GPY00_RS06370 PF01300 Telomere recombination GPY00_RS06375 PF01218 Coproporphyrinogen III oxidase GPY00_RS06380 PF01488 Shikimate / quinate 5-dehydrogenase GPY00_RS06380 PF08501 Shikimate dehydrogenase substrate binding domain GPY00_RS06380 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GPY00_RS06390 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS06430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GPY00_RS06435 PF01964 Radical SAM ThiC family GPY00_RS06435 PF13667 ThiC-associated domain GPY00_RS06440 PF02581 Thiamine monophosphate synthase GPY00_RS06445 PF00899 ThiF family GPY00_RS06450 PF02597 ThiS family GPY00_RS06455 PF05690 Thiazole biosynthesis protein ThiG GPY00_RS06460 PF04055 Radical SAM superfamily GPY00_RS06460 PF06968 Biotin and Thiamin Synthesis associated domain GPY00_RS06465 PF01321 Creatinase/Prolidase N-terminal domain GPY00_RS06465 PF00557 Metallopeptidase family M24 GPY00_RS06470 PF03466 LysR substrate binding domain GPY00_RS06470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS06475 PF07690 Major Facilitator Superfamily GPY00_RS06485 PF01037 Lrp/AsnC ligand binding domain GPY00_RS06490 PF00563 EAL domain GPY00_RS06490 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS06490 PF08448 PAS fold GPY00_RS06495 PF04445 Putative SAM-dependent methyltransferase GPY00_RS06505 PF00892 EamA-like transporter family GPY00_RS06510 PF00582 Universal stress protein family GPY00_RS06520 PF00210 Ferritin-like domain GPY00_RS06525 PF10625 Universal stress protein B (UspB) GPY00_RS06540 PF02646 RmuC family GPY00_RS06545 PF01209 ubiE/COQ5 methyltransferase family GPY00_RS06550 PF02036 SCP-2 sterol transfer family GPY00_RS06555 PF03109 ABC1 family GPY00_RS06560 PF02416 mttA/Hcf106 family GPY00_RS06565 PF02416 mttA/Hcf106 family GPY00_RS06570 PF00902 Sec-independent protein translocase protein (TatC) GPY00_RS06580 PF03150 Di-haem cytochrome c peroxidase GPY00_RS06580 PF00034 Cytochrome c GPY00_RS06585 PF01554 MatE GPY00_RS06595 PF00717 Peptidase S24-like GPY00_RS06595 PF01726 LexA DNA binding domain GPY00_RS06600 PF01553 Acyltransferase GPY00_RS06605 PF01040 UbiA prenyltransferase family GPY00_RS06610 PF04345 Chorismate lyase GPY00_RS06620 PF03748 Flagellar basal body-associated protein FliL GPY00_RS06625 PF02203 Tar ligand binding domain homologue GPY00_RS06625 PF00672 HAMP domain GPY00_RS06625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS06630 PF01694 Rhomboid family GPY00_RS06630 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GPY00_RS06635 PF00581 Rhodanese-like domain GPY00_RS06645 PF01026 TatD related DNase GPY00_RS06650 PF00490 Delta-aminolevulinic acid dehydratase GPY00_RS06660 PF00476 DNA polymerase family A GPY00_RS06660 PF01612 3'-5' exonuclease GPY00_RS06660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GPY00_RS06660 PF01367 5'-3' exonuclease, C-terminal SAM fold GPY00_RS06665 PF01926 50S ribosome-binding GTPase GPY00_RS06670 PF00034 Cytochrome c GPY00_RS06680 PF04220 Der GTPase activator (YihI) GPY00_RS06685 PF10675 Protein of unknown function (DUF2489) GPY00_RS06690 PF04055 Radical SAM superfamily GPY00_RS06690 PF06969 HemN C-terminal domain GPY00_RS06695 PF07219 HemY protein N-terminus GPY00_RS06700 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GPY00_RS06705 PF02602 Uroporphyrinogen-III synthase HemD GPY00_RS06710 PF03900 Porphobilinogen deaminase, C-terminal domain GPY00_RS06710 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GPY00_RS06720 PF01295 Adenylate cyclase, class-I GPY00_RS06720 PF12633 Adenylate cyclase NT domain GPY00_RS06725 PF01491 Frataxin-like domain GPY00_RS06735 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY00_RS06735 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GPY00_RS06740 PF01678 Diaminopimelate epimerase GPY00_RS06745 PF04340 Protein of unknown function, DUF484 GPY00_RS06750 PF02899 Phage integrase, N-terminal SAM-like domain GPY00_RS06750 PF00589 Phage integrase family GPY00_RS06755 PF13419 Haloacid dehalogenase-like hydrolase GPY00_RS06780 PF12146 Serine aminopeptidase, S33 GPY00_RS06785 PF01810 LysE type translocator GPY00_RS06790 PF08668 HDOD domain GPY00_RS06790 PF00563 EAL domain GPY00_RS06795 PF00210 Ferritin-like domain GPY00_RS06830 PF02881 SRP54-type protein, helical bundle domain GPY00_RS06830 PF00448 SRP54-type protein, GTPase domain GPY00_RS06835 PF00005 ABC transporter GPY00_RS06840 PF18075 FtsX extracellular domain GPY00_RS06845 PF00140 Sigma-70 factor, region 1.2 GPY00_RS06845 PF04542 Sigma-70 region 2 GPY00_RS06845 PF04545 Sigma-70, region 4 GPY00_RS06850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY00_RS06850 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS06855 PF00440 Bacterial regulatory proteins, tetR family GPY00_RS06865 PF13006 Insertion element 4 transposase N-terminal GPY00_RS06865 PF01609 Transposase DDE domain GPY00_RS06900 PF00075 RNase H GPY00_RS06930 PF07510 Protein of unknown function (DUF1524) GPY00_RS06965 PF04002 RadC-like JAB domain GPY00_RS06995 PF05958 tRNA (Uracil-5-)-methyltransferase GPY00_RS07000 PF07715 TonB-dependent Receptor Plug Domain GPY00_RS07000 PF00593 TonB dependent receptor GPY00_RS07005 PF05922 Peptidase inhibitor I9 GPY00_RS07005 PF00082 Subtilase family GPY00_RS07005 PF04151 Bacterial pre-peptidase C-terminal domain GPY00_RS07010 PF01177 Asp/Glu/Hydantoin racemase GPY00_RS07080 PF00962 Adenosine/AMP deaminase GPY00_RS07085 PF00563 EAL domain GPY00_RS07085 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS07085 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS07085 PF13188 PAS domain GPY00_RS07090 PF00072 Response regulator receiver domain GPY00_RS07090 PF02954 Bacterial regulatory protein, Fis family GPY00_RS07090 PF00158 Sigma-54 interaction domain GPY00_RS07095 PF00989 PAS fold GPY00_RS07095 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS07095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS07105 PF03951 Glutamine synthetase, beta-Grasp domain GPY00_RS07105 PF00120 Glutamine synthetase, catalytic domain GPY00_RS07120 PF03668 P-loop ATPase protein family GPY00_RS07125 PF03631 Virulence factor BrkB GPY00_RS07130 PF02580 D-Tyr-tRNA(Tyr) deacylase GPY00_RS07135 PF00583 Acetyltransferase (GNAT) family GPY00_RS07135 PF09500 Putative thioesterase (yiiD_Cterm) GPY00_RS07145 PF01293 Phosphoenolpyruvate carboxykinase GPY00_RS07150 PF01430 Hsp33 protein GPY00_RS07155 PF01479 S4 domain GPY00_RS07160 PF11356 Type II secretion system protein C GPY00_RS07165 PF03958 Bacterial type II/III secretion system short domain GPY00_RS07165 PF00263 Bacterial type II and III secretion system protein GPY00_RS07170 PF00437 Type II/IV secretion system protein GPY00_RS07175 PF00482 Type II secretion system (T2SS), protein F GPY00_RS07180 PF07963 Prokaryotic N-terminal methylation motif GPY00_RS07180 PF08334 Type II secretion system (T2SS), protein G GPY00_RS07185 PF12019 Type II transport protein GspH GPY00_RS07190 PF02501 Type II secretion system (T2SS), protein I GPY00_RS07190 PF07963 Prokaryotic N-terminal methylation motif GPY00_RS07195 PF11612 Type II secretion system (T2SS), protein J GPY00_RS07195 PF07963 Prokaryotic N-terminal methylation motif GPY00_RS07200 PF03934 Type II secretion system (T2SS), protein K GPY00_RS07205 PF12693 GspL periplasmic domain GPY00_RS07205 PF05134 Type II secretion system (T2SS), protein L GPY00_RS07210 PF04612 Type II secretion system (T2SS), protein M GPY00_RS07215 PF01203 Type II secretion system (T2SS), protein N GPY00_RS07220 PF00459 Inositol monophosphatase family GPY00_RS07225 PF00293 NUDIX domain GPY00_RS07230 PF01106 NifU-like domain GPY00_RS07230 PF01521 Iron-sulphur cluster biosynthesis GPY00_RS07235 PF00156 Phosphoribosyl transferase domain GPY00_RS07240 PF00561 alpha/beta hydrolase fold GPY00_RS07250 PF16921 Tex protein YqgF-like domain GPY00_RS07250 PF00575 S1 RNA binding domain GPY00_RS07250 PF09371 Tex-like protein N-terminal domain GPY00_RS07250 PF17674 HHH domain GPY00_RS07255 PF03449 Transcription elongation factor, N-terminal GPY00_RS07255 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY00_RS07260 PF17152 Periplasmic sensor domain GPY00_RS07260 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS07265 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS07265 PF00072 Response regulator receiver domain GPY00_RS07270 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS07270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS07270 PF00672 HAMP domain GPY00_RS07275 PF00860 Permease family GPY00_RS07280 PF17191 RecG wedge domain GPY00_RS07280 PF00270 DEAD/DEAH box helicase GPY00_RS07280 PF00271 Helicase conserved C-terminal domain GPY00_RS07285 PF02824 TGS domain GPY00_RS07285 PF13291 ACT domain GPY00_RS07285 PF04607 Region found in RelA / SpoT proteins GPY00_RS07290 PF01192 RNA polymerase Rpb6 GPY00_RS07295 PF00625 Guanylate kinase GPY00_RS07300 PF02592 Putative vitamin uptake transporter GPY00_RS07305 PF00474 Sodium:solute symporter family GPY00_RS07315 PF03471 Transporter associated domain GPY00_RS07315 PF02080 TrkA-C domain GPY00_RS07315 PF00999 Sodium/hydrogen exchanger family GPY00_RS07320 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS07320 PF00072 Response regulator receiver domain GPY00_RS07325 PF11412 Disulphide bond corrector protein DsbC GPY00_RS07325 PF02683 Cytochrome C biogenesis protein transmembrane region GPY00_RS07335 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY00_RS07335 PF11852 Domain of unknown function (DUF3372) GPY00_RS07335 PF03714 Bacterial pullanase-associated domain GPY00_RS07335 PF18494 Pullulanase Ins domain GPY00_RS07335 PF17967 Pullulanase N2 domain GPY00_RS07340 PF03605 Anaerobic c4-dicarboxylate membrane transporter GPY00_RS07345 PF10415 Fumarase C C-terminus GPY00_RS07345 PF00206 Lyase GPY00_RS07350 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS07350 PF17158 Membrane-associated sensor, integral membrane domain GPY00_RS07355 PF04186 FxsA cytoplasmic membrane protein GPY00_RS07360 PF00588 SpoU rRNA Methylase family GPY00_RS07365 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GPY00_RS07365 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GPY00_RS07370 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS07370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS07370 PF00672 HAMP domain GPY00_RS07370 PF16527 Two-component sensor protein CpxA, periplasmic domain GPY00_RS07375 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS07375 PF00072 Response regulator receiver domain GPY00_RS07385 PF01545 Cation efflux family GPY00_RS07385 PF16916 Dimerisation domain of Zinc Transporter GPY00_RS07390 PF00365 Phosphofructokinase GPY00_RS07395 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GPY00_RS07400 PF06005 Cell division protein ZapB GPY00_RS07405 PF02219 Methylenetetrahydrofolate reductase GPY00_RS07410 PF13006 Insertion element 4 transposase N-terminal GPY00_RS07410 PF01609 Transposase DDE domain GPY00_RS07415 PF00696 Amino acid kinase family GPY00_RS07415 PF03447 Homoserine dehydrogenase, NAD binding domain GPY00_RS07415 PF00742 Homoserine dehydrogenase GPY00_RS07420 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY00_RS07425 PF01340 Met Apo-repressor, MetJ GPY00_RS07430 PF00390 Malic enzyme, N-terminal domain GPY00_RS07430 PF03949 Malic enzyme, NAD binding domain GPY00_RS07435 PF01197 Ribosomal protein L31 GPY00_RS07440 PF00271 Helicase conserved C-terminal domain GPY00_RS07440 PF00270 DEAD/DEAH box helicase GPY00_RS07440 PF17764 3′ DNA-binding domain (3′BD) GPY00_RS07440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GPY00_RS07440 PF18074 Primosomal protein N C-terminal domain GPY00_RS07445 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS07450 PF05036 Sporulation related domain GPY00_RS07455 PF00227 Proteasome subunit GPY00_RS07460 PF10431 C-terminal, D2-small domain, of ClpB protein GPY00_RS07460 PF07724 AAA domain (Cdc48 subfamily) GPY00_RS07460 PF00004 ATPase family associated with various cellular activities (AAA) GPY00_RS07465 PF01040 UbiA prenyltransferase family GPY00_RS07470 PF03737 Aldolase/RraA GPY00_RS07480 PF00121 Triosephosphate isomerase GPY00_RS07500 PF08220 DeoR-like helix-turn-helix domain GPY00_RS07500 PF00455 DeoR C terminal sensor domain GPY00_RS07505 PF00166 Chaperonin 10 Kd subunit GPY00_RS07510 PF00118 TCP-1/cpn60 chaperonin family GPY00_RS07520 PF04055 Radical SAM superfamily GPY00_RS07525 PF09285 Elongation factor P, C-terminal GPY00_RS07525 PF01132 Elongation factor P (EF-P) OB domain GPY00_RS07525 PF08207 Elongation factor P (EF-P) KOW-like domain GPY00_RS07530 PF02313 Fumarate reductase subunit D GPY00_RS07535 PF02300 Fumarate reductase subunit C GPY00_RS07540 PF13183 4Fe-4S dicluster domain GPY00_RS07540 PF13085 2Fe-2S iron-sulfur cluster binding domain GPY00_RS07545 PF00890 FAD binding domain GPY00_RS07545 PF02910 Fumarate reductase flavoprotein C-term GPY00_RS07550 PF00152 tRNA synthetases class II (D, K and N) GPY00_RS07555 PF00581 Rhodanese-like domain GPY00_RS07560 PF02556 Preprotein translocase subunit SecB GPY00_RS07565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GPY00_RS07565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GPY00_RS07570 PF06426 Serine acetyltransferase, N-terminal GPY00_RS07570 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS07580 PF00311 Phosphoenolpyruvate carboxylase GPY00_RS07585 PF01546 Peptidase family M20/M25/M40 GPY00_RS07585 PF07687 Peptidase dimerisation domain GPY00_RS07590 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY00_RS07590 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY00_RS07595 PF00696 Amino acid kinase family GPY00_RS07600 PF00764 Arginosuccinate synthase GPY00_RS07605 PF00206 Lyase GPY00_RS07605 PF14698 Argininosuccinate lyase C-terminal GPY00_RS07615 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS07615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY00_RS07620 PF00462 Glutaredoxin GPY00_RS07620 PF08534 Redoxin GPY00_RS07625 PF03466 LysR substrate binding domain GPY00_RS07625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS07630 PF00905 Penicillin binding protein transpeptidase domain GPY00_RS07630 PF17092 Penicillin-binding protein OB-like domain GPY00_RS07630 PF00912 Transglycosylase GPY00_RS07655 PF07660 Secretin and TonB N terminus short domain GPY00_RS07655 PF03958 Bacterial type II/III secretion system short domain GPY00_RS07655 PF00263 Bacterial type II and III secretion system protein GPY00_RS07655 PF11741 AMIN domain GPY00_RS07660 PF01202 Shikimate kinase GPY00_RS07665 PF01761 3-dehydroquinate synthase GPY00_RS07675 PF02086 D12 class N6 adenine-specific DNA methyltransferase GPY00_RS07680 PF00834 Ribulose-phosphate 3 epimerase family GPY00_RS07685 PF13419 Haloacid dehalogenase-like hydrolase GPY00_RS07690 PF00579 tRNA synthetases class I (W and Y) GPY00_RS07705 PF00919 Uncharacterized protein family UPF0004 GPY00_RS07705 PF18693 TRAM domain GPY00_RS07705 PF04055 Radical SAM superfamily GPY00_RS07710 PF00117 Glutamine amidotransferase class-I GPY00_RS07715 PF00202 Aminotransferase class-III GPY00_RS07720 PF04958 Arginine N-succinyltransferase beta subunit GPY00_RS07725 PF00171 Aldehyde dehydrogenase family GPY00_RS07735 PF13545 Crp-like helix-turn-helix domain GPY00_RS07735 PF00027 Cyclic nucleotide-binding domain GPY00_RS07740 PF00485 Phosphoribulokinase / Uridine kinase family GPY00_RS07745 PF06794 Uncharacterised protein family (UPF0270) GPY00_RS07750 PF00561 alpha/beta hydrolase fold GPY00_RS07760 PF00005 ABC transporter GPY00_RS07760 PF12848 ABC transporter GPY00_RS07765 PF02525 Flavodoxin-like fold GPY00_RS07770 PF00999 Sodium/hydrogen exchanger family GPY00_RS07770 PF02254 TrkA-N domain GPY00_RS07780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY00_RS07785 PF01112 Asparaginase GPY00_RS07790 PF00709 Adenylosuccinate synthetase GPY00_RS07795 PF08238 Sel1 repeat GPY00_RS07800 PF11893 Domain of unknown function (DUF3413) GPY00_RS07800 PF00884 Sulfatase GPY00_RS07805 PF17876 Cold shock domain GPY00_RS07805 PF08206 Ribonuclease B OB domain GPY00_RS07805 PF00575 S1 RNA binding domain GPY00_RS07805 PF08461 Ribonuclease R winged-helix domain GPY00_RS07805 PF00773 RNB domain GPY00_RS07810 PF00588 SpoU rRNA Methylase family GPY00_RS07810 PF08032 RNA 2'-O ribose methyltransferase substrate binding GPY00_RS07815 PF00338 Ribosomal protein S10p/S20e GPY00_RS07820 PF00297 Ribosomal protein L3 GPY00_RS07825 PF00573 Ribosomal protein L4/L1 family GPY00_RS07830 PF00276 Ribosomal protein L23 GPY00_RS07835 PF00181 Ribosomal Proteins L2, RNA binding domain GPY00_RS07835 PF03947 Ribosomal Proteins L2, C-terminal domain GPY00_RS07840 PF00203 Ribosomal protein S19 GPY00_RS07845 PF00237 Ribosomal protein L22p/L17e GPY00_RS07850 PF07650 KH domain GPY00_RS07850 PF00189 Ribosomal protein S3, C-terminal domain GPY00_RS07855 PF00252 Ribosomal protein L16p/L10e GPY00_RS07860 PF00831 Ribosomal L29 protein GPY00_RS07865 PF00366 Ribosomal protein S17 GPY00_RS07870 PF00238 Ribosomal protein L14p/L23e GPY00_RS07875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GPY00_RS07875 PF00467 KOW motif GPY00_RS07880 PF00281 Ribosomal protein L5 GPY00_RS07880 PF00673 ribosomal L5P family C-terminus GPY00_RS07885 PF00253 Ribosomal protein S14p/S29e GPY00_RS07890 PF00410 Ribosomal protein S8 GPY00_RS07895 PF00347 Ribosomal protein L6 GPY00_RS07900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GPY00_RS07905 PF03719 Ribosomal protein S5, C-terminal domain GPY00_RS07905 PF00333 Ribosomal protein S5, N-terminal domain GPY00_RS07910 PF00327 Ribosomal protein L30p/L7e GPY00_RS07915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GPY00_RS07920 PF00344 SecY translocase GPY00_RS07925 PF00444 Ribosomal protein L36 GPY00_RS07930 PF00416 Ribosomal protein S13/S18 GPY00_RS07935 PF00411 Ribosomal protein S11 GPY00_RS07940 PF00163 Ribosomal protein S4/S9 N-terminal domain GPY00_RS07940 PF01479 S4 domain GPY00_RS07945 PF01000 RNA polymerase Rpb3/RpoA insert domain GPY00_RS07945 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GPY00_RS07945 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GPY00_RS07950 PF01196 Ribosomal protein L17 GPY00_RS07960 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY00_RS07960 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY00_RS07965 PF08525 Opacity-associated protein A N-terminal motif GPY00_RS07965 PF04225 Opacity-associated protein A LysM-like domain GPY00_RS07970 PF00892 EamA-like transporter family GPY00_RS07975 PF13673 Acetyltransferase (GNAT) domain GPY00_RS07980 PF03880 DbpA RNA binding domain GPY00_RS07980 PF00271 Helicase conserved C-terminal domain GPY00_RS07980 PF00270 DEAD/DEAH box helicase GPY00_RS07990 PF00149 Calcineurin-like phosphoesterase GPY00_RS07990 PF02872 5'-nucleotidase, C-terminal domain GPY00_RS07995 PF14824 Sirohaem biosynthesis protein central GPY00_RS07995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY00_RS07995 PF10414 Sirohaem synthase dimerisation region GPY00_RS08000 PF01507 Phosphoadenosine phosphosulfate reductase family GPY00_RS08005 PF00009 Elongation factor Tu GTP binding domain GPY00_RS08030 PF00005 ABC transporter GPY00_RS08040 PF10795 Protein of unknown function (DUF2607) GPY00_RS08045 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GPY00_RS08050 PF01625 Peptide methionine sulfoxide reductase GPY00_RS08055 PF07244 Surface antigen variable number repeat GPY00_RS08055 PF17243 POTRA domain TamA domain 1 GPY00_RS08055 PF01103 Surface antigen GPY00_RS08060 PF04357 TamB, inner membrane protein subunit of TAM complex GPY00_RS08065 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GPY00_RS08070 PF00719 Inorganic pyrophosphatase GPY00_RS08075 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GPY00_RS08080 PF01225 Mur ligase family, catalytic domain GPY00_RS08080 PF02875 Mur ligase family, glutamate ligase domain GPY00_RS08080 PF08245 Mur ligase middle domain GPY00_RS08085 PF02441 Flavoprotein GPY00_RS08095 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS08100 PF00005 ABC transporter GPY00_RS08105 PF04751 Protein of unknown function (DUF615) GPY00_RS08110 PF01523 Putative modulator of DNA gyrase GPY00_RS08115 PF01769 Divalent cation transporter GPY00_RS08115 PF03448 MgtE intracellular N domain GPY00_RS08115 PF00571 CBS domain GPY00_RS08120 PF00381 PTS HPr component phosphorylation site GPY00_RS08125 PF03668 P-loop ATPase protein family GPY00_RS08130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY00_RS08135 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GPY00_RS08140 PF04963 Sigma-54 factor, core binding domain GPY00_RS08140 PF00309 Sigma-54 factor, Activator interacting domain (AID) GPY00_RS08140 PF04552 Sigma-54, DNA binding domain GPY00_RS08145 PF12399 Branched-chain amino acid ATP-binding cassette transporter GPY00_RS08145 PF00005 ABC transporter GPY00_RS08150 PF03968 OstA-like protein GPY00_RS08165 PF01380 SIS domain GPY00_RS08165 PF00571 CBS domain GPY00_RS08170 PF01699 Sodium/calcium exchanger protein GPY00_RS08175 PF00005 ABC transporter GPY00_RS08180 PF02405 Permease MlaE GPY00_RS08185 PF02470 MlaD protein GPY00_RS08190 PF05494 MlaC protein GPY00_RS08200 PF01722 BolA-like protein GPY00_RS08205 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GPY00_RS08210 PF01553 Acyltransferase GPY00_RS08220 PF01042 Endoribonuclease L-PSP GPY00_RS08225 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GPY00_RS08225 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GPY00_RS08230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GPY00_RS08230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GPY00_RS08235 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GPY00_RS08235 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GPY00_RS08240 PF02562 PhoH-like protein GPY00_RS08240 PF13638 PIN domain GPY00_RS08245 PF18337 RapA N-terminal Tudor like domain GPY00_RS08245 PF00176 SNF2 family N-terminal domain GPY00_RS08245 PF00271 Helicase conserved C-terminal domain GPY00_RS08245 PF12137 RNA polymerase recycling family C-terminal GPY00_RS08245 PF18339 RapA N-terminal Tudor like domain 1 GPY00_RS08250 PF00849 RNA pseudouridylate synthase GPY00_RS08260 PF05987 Bacterial protein of unknown function (DUF898) GPY00_RS08270 PF10458 Valyl tRNA synthetase tRNA binding arm GPY00_RS08270 PF00133 tRNA synthetases class I (I, L, M and V) GPY00_RS08270 PF08264 Anticodon-binding domain of tRNA GPY00_RS08275 PF04364 DNA polymerase III chi subunit, HolC GPY00_RS08280 PF02789 Cytosol aminopeptidase family, N-terminal domain GPY00_RS08280 PF00883 Cytosol aminopeptidase family, catalytic domain GPY00_RS08285 PF03739 Lipopolysaccharide export system permease LptF/LptG GPY00_RS08290 PF03739 Lipopolysaccharide export system permease LptF/LptG GPY00_RS08310 PF00072 Response regulator receiver domain GPY00_RS08355 PF00694 Aconitase C-terminal domain GPY00_RS08360 PF00330 Aconitase family (aconitate hydratase) GPY00_RS08365 PF00180 Isocitrate/isopropylmalate dehydrogenase GPY00_RS08370 PF08502 LeuA allosteric (dimerisation) domain GPY00_RS08370 PF00682 HMGL-like GPY00_RS08380 PF01569 PAP2 superfamily GPY00_RS08390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS08390 PF03466 LysR substrate binding domain GPY00_RS08395 PF00501 AMP-binding enzyme GPY00_RS08400 PF00205 Thiamine pyrophosphate enzyme, central domain GPY00_RS08400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY00_RS08400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY00_RS08405 PF10369 Small subunit of acetolactate synthase GPY00_RS08410 PF01609 Transposase DDE domain GPY00_RS08410 PF13006 Insertion element 4 transposase N-terminal GPY00_RS08420 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GPY00_RS08425 PF01812 5-formyltetrahydrofolate cyclo-ligase family GPY00_RS08435 PF05164 Cell division protein ZapA GPY00_RS08440 PF03695 Uncharacterised protein family (UPF0149) GPY00_RS08445 PF01494 FAD binding domain GPY00_RS08450 PF01494 FAD binding domain GPY00_RS08470 PF03937 Flavinator of succinate dehydrogenase GPY00_RS08480 PF00890 FAD binding domain GPY00_RS08480 PF02910 Fumarate reductase flavoprotein C-term GPY00_RS08485 PF08281 Sigma-70, region 4 GPY00_RS08485 PF04542 Sigma-70 region 2 GPY00_RS08490 PF03873 Anti sigma-E protein RseA, C-terminal domain GPY00_RS08490 PF03872 Anti sigma-E protein RseA, N-terminal domain GPY00_RS08495 PF17188 MucB/RseB C-terminal domain GPY00_RS08495 PF03888 MucB/RseB N-terminal domain GPY00_RS08505 PF06421 GTP-binding protein LepA C-terminus GPY00_RS08505 PF03144 Elongation factor Tu domain 2 GPY00_RS08505 PF00009 Elongation factor Tu GTP binding domain GPY00_RS08505 PF00679 Elongation factor G C-terminus GPY00_RS08510 PF10502 Signal peptidase, peptidase S26 GPY00_RS08515 PF00035 Double-stranded RNA binding motif GPY00_RS08515 PF14622 Ribonuclease-III-like GPY00_RS08520 PF01926 50S ribosome-binding GTPase GPY00_RS08520 PF07650 KH domain GPY00_RS08525 PF11967 Recombination protein O N terminal GPY00_RS08525 PF02565 Recombination protein O C terminal GPY00_RS08530 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GPY00_RS08535 PF01648 4'-phosphopantetheinyl transferase superfamily GPY00_RS08550 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS08555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS08555 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS08555 PF01627 Hpt domain GPY00_RS08555 PF00072 Response regulator receiver domain GPY00_RS08555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY00_RS08555 PF00672 HAMP domain GPY00_RS08560 PF01938 TRAM domain GPY00_RS08560 PF05958 tRNA (Uracil-5-)-methyltransferase GPY00_RS08565 PF13291 ACT domain GPY00_RS08565 PF04607 Region found in RelA / SpoT proteins GPY00_RS08565 PF02824 TGS domain GPY00_RS08570 PF03819 MazG nucleotide pyrophosphohydrolase domain GPY00_RS08575 PF00117 Glutamine amidotransferase class-I GPY00_RS08575 PF06418 CTP synthase N-terminus GPY00_RS08580 PF00113 Enolase, C-terminal TIM barrel domain GPY00_RS08580 PF03952 Enolase, N-terminal domain GPY00_RS08585 PF01743 Poly A polymerase head domain GPY00_RS08585 PF01966 HD domain GPY00_RS08585 PF12627 Probable RNA and SrmB- binding site of polymerase A GPY00_RS08590 PF13401 AAA domain GPY00_RS08590 PF01471 Putative peptidoglycan binding domain GPY00_RS08600 PF08239 Bacterial SH3 domain GPY00_RS08605 PF01384 Phosphate transporter family GPY00_RS08610 PF01865 Protein of unknown function DUF47 GPY00_RS08615 PF01928 CYTH domain GPY00_RS08625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS08625 PF00672 HAMP domain GPY00_RS08625 PF02743 Cache domain GPY00_RS08630 PF08335 GlnD PII-uridylyltransferase GPY00_RS08630 PF03710 Glutamate-ammonia ligase adenylyltransferase GPY00_RS08635 PF00294 pfkB family carbohydrate kinase GPY00_RS08635 PF01467 Cytidylyltransferase-like GPY00_RS08640 PF02321 Outer membrane efflux protein GPY00_RS08645 PF00293 NUDIX domain GPY00_RS08650 PF06853 Protein of unknown function (DUF1249) GPY00_RS08655 PF00149 Calcineurin-like phosphoesterase GPY00_RS08660 PF05728 Uncharacterised protein family (UPF0227) GPY00_RS08665 PF00986 DNA gyrase B subunit, carboxyl terminus GPY00_RS08665 PF00204 DNA gyrase B GPY00_RS08665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS08665 PF01751 Toprim domain GPY00_RS08670 PF00521 DNA gyrase/topoisomerase IV, subunit A GPY00_RS08670 PF03989 DNA gyrase C-terminal domain, beta-propeller GPY00_RS08675 PF03884 DNA gyrase inhibitor YacG GPY00_RS08680 PF07072 Cell division protein GPY00_RS08685 PF01121 Dephospho-CoA kinase GPY00_RS08690 PF06750 Bacterial Peptidase A24 N-terminal domain GPY00_RS08690 PF01478 Type IV leader peptidase family GPY00_RS08695 PF00482 Type II secretion system (T2SS), protein F GPY00_RS08700 PF00437 Type II/IV secretion system protein GPY00_RS08700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GPY00_RS08710 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GPY00_RS08710 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GPY00_RS08715 PF01510 N-acetylmuramoyl-L-alanine amidase GPY00_RS08725 PF00258 Flavodoxin GPY00_RS08730 PF02899 Phage integrase, N-terminal SAM-like domain GPY00_RS08730 PF00589 Phage integrase family GPY00_RS08735 PF13098 Thioredoxin-like domain GPY00_RS08735 PF10411 Disulfide bond isomerase protein N-terminus GPY00_RS08740 PF02272 DHHA1 domain GPY00_RS08740 PF01368 DHH family GPY00_RS08740 PF17768 RecJ OB domain GPY00_RS08745 PF07729 FCD domain GPY00_RS08745 PF00392 Bacterial regulatory proteins, gntR family GPY00_RS08750 PF17831 Pyruvate dehydrogenase E1 component middle domain GPY00_RS08750 PF00456 Transketolase, thiamine diphosphate binding domain GPY00_RS08755 PF00364 Biotin-requiring enzyme GPY00_RS08755 PF02817 e3 binding domain GPY00_RS08755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY00_RS08760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY00_RS08760 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS08770 PF01795 MraW methylase family GPY00_RS08775 PF04999 Cell division protein FtsL GPY00_RS08780 PF00905 Penicillin binding protein transpeptidase domain GPY00_RS08780 PF03717 Penicillin-binding Protein dimerisation domain GPY00_RS08785 PF08245 Mur ligase middle domain GPY00_RS08785 PF01225 Mur ligase family, catalytic domain GPY00_RS08785 PF02875 Mur ligase family, glutamate ligase domain GPY00_RS08790 PF08245 Mur ligase middle domain GPY00_RS08790 PF02875 Mur ligase family, glutamate ligase domain GPY00_RS08790 PF01225 Mur ligase family, catalytic domain GPY00_RS08795 PF00953 Glycosyl transferase family 4 GPY00_RS08795 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GPY00_RS08800 PF02875 Mur ligase family, glutamate ligase domain GPY00_RS08800 PF08245 Mur ligase middle domain GPY00_RS08805 PF01098 Cell cycle protein GPY00_RS08810 PF03033 Glycosyltransferase family 28 N-terminal domain GPY00_RS08810 PF04101 Glycosyltransferase family 28 C-terminal domain GPY00_RS08815 PF01225 Mur ligase family, catalytic domain GPY00_RS08815 PF08245 Mur ligase middle domain GPY00_RS08815 PF02875 Mur ligase family, glutamate ligase domain GPY00_RS08820 PF03799 Cell division protein FtsQ GPY00_RS08820 PF08478 POTRA domain, FtsQ-type GPY00_RS08825 PF02491 SHS2 domain inserted in FTSA GPY00_RS08830 PF00091 Tubulin/FtsZ family, GTPase domain GPY00_RS08830 PF12327 FtsZ family, C-terminal domain GPY00_RS08835 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GPY00_RS08845 PF02810 SEC-C motif GPY00_RS08845 PF01043 SecA preprotein cross-linking domain GPY00_RS08845 PF07517 SecA DEAD-like domain GPY00_RS08845 PF07516 SecA Wing and Scaffold domain GPY00_RS08850 PF00293 NUDIX domain GPY00_RS08855 PF05173 Dihydrodipicolinate reductase, C-terminus GPY00_RS08855 PF01113 Dihydrodipicolinate reductase, N-terminus GPY00_RS08865 PF00117 Glutamine amidotransferase class-I GPY00_RS08865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GPY00_RS08870 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GPY00_RS08870 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GPY00_RS08870 PF02142 MGS-like domain GPY00_RS08880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GPY00_RS08895 PF01925 Sulfite exporter TauE/SafE GPY00_RS08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS08900 PF03466 LysR substrate binding domain GPY00_RS08905 PF03458 UPF0126 domain GPY00_RS08910 PF01497 Periplasmic binding protein GPY00_RS08920 PF01048 Phosphorylase superfamily GPY00_RS08930 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GPY00_RS08930 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS08935 PF01493 GXGXG motif GPY00_RS08935 PF01645 Conserved region in glutamate synthase GPY00_RS08935 PF04898 Glutamate synthase central domain GPY00_RS08935 PF00310 Glutamine amidotransferases class-II GPY00_RS08940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GPY00_RS08940 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS08945 PF00310 Glutamine amidotransferases class-II GPY00_RS08945 PF04898 Glutamate synthase central domain GPY00_RS08945 PF01645 Conserved region in glutamate synthase GPY00_RS08945 PF01493 GXGXG motif GPY00_RS08950 PF04055 Radical SAM superfamily GPY00_RS08950 PF16199 Radical_SAM C-terminal domain GPY00_RS08955 PF01590 GAF domain GPY00_RS08955 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS08955 PF00360 Phytochrome region GPY00_RS08955 PF00563 EAL domain GPY00_RS08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS08960 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS08960 PF18415 Histidine kinase receptor ArcB trans-membrane domain GPY00_RS08960 PF01627 Hpt domain GPY00_RS08960 PF00989 PAS fold GPY00_RS08960 PF00072 Response regulator receiver domain GPY00_RS08965 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS08965 PF00072 Response regulator receiver domain GPY00_RS08975 PF03737 Aldolase/RraA GPY00_RS08990 PF00696 Amino acid kinase family GPY00_RS08990 PF00742 Homoserine dehydrogenase GPY00_RS08990 PF03447 Homoserine dehydrogenase, NAD binding domain GPY00_RS08990 PF01842 ACT domain GPY00_RS08990 PF13840 ACT domain GPY00_RS08995 PF00288 GHMP kinases N terminal domain GPY00_RS08995 PF08544 GHMP kinases C terminal GPY00_RS09000 PF14821 Threonine synthase N terminus GPY00_RS09000 PF00291 Pyridoxal-phosphate dependent enzyme GPY00_RS09005 PF01228 Glycine radical GPY00_RS09010 PF01261 Xylose isomerase-like TIM barrel GPY00_RS09015 PF03167 Uracil DNA glycosylase superfamily GPY00_RS09030 PF01235 Sodium:alanine symporter family GPY00_RS09035 PF03883 Peroxide stress protein YaaA GPY00_RS09045 PF01026 TatD related DNase GPY00_RS09050 PF07662 Na+ dependent nucleoside transporter C-terminus GPY00_RS09050 PF01773 Na+ dependent nucleoside transporter N-terminus GPY00_RS09050 PF07670 Nucleoside recognition GPY00_RS09060 PF01791 DeoC/LacD family aldolase GPY00_RS09065 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GPY00_RS09065 PF02885 Glycosyl transferase family, helical bundle domain GPY00_RS09065 PF00591 Glycosyl transferase family, a/b domain GPY00_RS09070 PF01676 Metalloenzyme superfamily GPY00_RS09075 PF01048 Phosphorylase superfamily GPY00_RS09085 PF18429 Domain of unknown function (DUF5609) GPY00_RS09095 PF18073 Rubredoxin metal binding domain GPY00_RS09100 PF00009 Elongation factor Tu GTP binding domain GPY00_RS09100 PF00679 Elongation factor G C-terminus GPY00_RS09100 PF03144 Elongation factor Tu domain 2 GPY00_RS09100 PF14492 Elongation Factor G, domain II GPY00_RS09100 PF03764 Elongation factor G, domain IV GPY00_RS09105 PF00501 AMP-binding enzyme GPY00_RS09110 PF00072 Response regulator receiver domain GPY00_RS09120 PF02929 Beta galactosidase small chain GPY00_RS09120 PF02837 Glycosyl hydrolases family 2, sugar binding domain GPY00_RS09120 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GPY00_RS09120 PF00703 Glycosyl hydrolases family 2 GPY00_RS09120 PF16353 Domain of unknown function(DUF4981) GPY00_RS09125 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS09130 PF01588 Putative tRNA binding domain GPY00_RS09140 PF01544 CorA-like Mg2+ transporter protein GPY00_RS09145 PF02080 TrkA-C domain GPY00_RS09145 PF18030 RimK PreATP-grasp domain GPY00_RS09145 PF08443 RimK-like ATP-grasp domain GPY00_RS09150 PF00583 Acetyltransferase (GNAT) family GPY00_RS09160 PF01797 Transposase IS200 like GPY00_RS09170 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle GPY00_RS09170 PF14602 Hexapeptide repeat of succinyl-transferase GPY00_RS09175 PF07130 YebG protein GPY00_RS09190 PF17946 RecC C-terminal domain GPY00_RS09195 PF00580 UvrD/REP helicase N-terminal domain GPY00_RS09195 PF13361 UvrD-like helicase C-terminal domain GPY00_RS09195 PF12705 PD-(D/E)XK nuclease superfamily GPY00_RS09200 PF13538 UvrD-like helicase C-terminal domain GPY00_RS09210 PF00583 Acetyltransferase (GNAT) family GPY00_RS09210 PF00696 Amino acid kinase family GPY00_RS09220 PF06725 3D domain GPY00_RS09220 PF03562 MltA specific insert domain GPY00_RS09225 PF00899 ThiF family GPY00_RS09230 PF02657 Fe-S metabolism associated domain GPY00_RS09235 PF00266 Aminotransferase class-V GPY00_RS09240 PF01965 DJ-1/PfpI family GPY00_RS09245 PF02558 Ketopantoate reductase PanE/ApbA GPY00_RS09245 PF08546 Ketopantoate reductase PanE/ApbA C terminal GPY00_RS09250 PF03502 Nucleoside-specific channel-forming protein, Tsx GPY00_RS09260 PF04542 Sigma-70 region 2 GPY00_RS09260 PF04545 Sigma-70, region 4 GPY00_RS09270 PF07690 Major Facilitator Superfamily GPY00_RS09280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GPY00_RS09290 PF05175 Methyltransferase small domain GPY00_RS09295 PF01722 BolA-like protein GPY00_RS09300 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GPY00_RS09300 PF11973 NQRA C-terminal domain GPY00_RS09305 PF03116 NQR2, RnfD, RnfE family GPY00_RS09310 PF04205 FMN-binding domain GPY00_RS09315 PF02508 Rnf-Nqr subunit, membrane protein GPY00_RS09320 PF02508 Rnf-Nqr subunit, membrane protein GPY00_RS09325 PF00970 Oxidoreductase FAD-binding domain GPY00_RS09325 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY00_RS09325 PF00175 Oxidoreductase NAD-binding domain GPY00_RS09330 PF02424 ApbE family GPY00_RS09340 PF00817 impB/mucB/samB family GPY00_RS09340 PF11798 IMS family HHH motif GPY00_RS09350 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS09350 PF17158 Membrane-associated sensor, integral membrane domain GPY00_RS09355 PF00209 Sodium:neurotransmitter symporter family GPY00_RS09365 PF18030 RimK PreATP-grasp domain GPY00_RS09365 PF08443 RimK-like ATP-grasp domain GPY00_RS09370 PF18030 RimK PreATP-grasp domain GPY00_RS09370 PF08443 RimK-like ATP-grasp domain GPY00_RS09375 PF07687 Peptidase dimerisation domain GPY00_RS09375 PF01546 Peptidase family M20/M25/M40 GPY00_RS09380 PF00860 Permease family GPY00_RS09385 PF00156 Phosphoribosyl transferase domain GPY00_RS09395 PF07417 Sigma factor-binding transcriptional regulator Crl GPY00_RS09400 PF01472 PUA domain GPY00_RS09400 PF00696 Amino acid kinase family GPY00_RS09405 PF00171 Aldehyde dehydrogenase family GPY00_RS09410 PF03477 ATP cone domain GPY00_RS09415 PF01872 RibD C-terminal domain GPY00_RS09415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY00_RS09420 PF00677 Lumazine binding domain GPY00_RS09425 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GPY00_RS09425 PF00925 GTP cyclohydrolase II GPY00_RS09430 PF00885 6,7-dimethyl-8-ribityllumazine synthase GPY00_RS09435 PF01029 NusB family GPY00_RS09440 PF00586 AIR synthase related protein, N-terminal domain GPY00_RS09440 PF02769 AIR synthase related protein, C-terminal domain GPY00_RS09445 PF04608 Phosphatidylglycerophosphatase A GPY00_RS09450 PF11944 Protein of unknown function (DUF3461) GPY00_RS09455 PF01909 Nucleotidyltransferase domain GPY00_RS09455 PF08335 GlnD PII-uridylyltransferase GPY00_RS09455 PF01966 HD domain GPY00_RS09460 PF00557 Metallopeptidase family M24 GPY00_RS09465 PF00318 Ribosomal protein S2 GPY00_RS09470 PF00889 Elongation factor TS GPY00_RS09475 PF00696 Amino acid kinase family GPY00_RS09480 PF01765 Ribosome recycling factor GPY00_RS09485 PF01255 Putative undecaprenyl diphosphate synthase GPY00_RS09495 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GPY00_RS09495 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GPY00_RS09495 PF13288 DXP reductoisomerase C-terminal domain GPY00_RS09500 PF17820 PDZ domain GPY00_RS09500 PF02163 Peptidase family M50 GPY00_RS09505 PF07244 Surface antigen variable number repeat GPY00_RS09505 PF01103 Surface antigen GPY00_RS09510 PF03938 Outer membrane protein (OmpH-like) GPY00_RS09515 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS09515 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GPY00_RS09520 PF07977 FabA-like domain GPY00_RS09525 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS09525 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GPY00_RS09530 PF02684 Lipid-A-disaccharide synthetase GPY00_RS09535 PF01351 Ribonuclease HII GPY00_RS09540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY00_RS09540 PF14579 Helix-hairpin-helix motif GPY00_RS09540 PF02811 PHP domain GPY00_RS09540 PF01336 OB-fold nucleic acid binding domain GPY00_RS09540 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY00_RS09545 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GPY00_RS09555 PF01171 PP-loop family GPY00_RS09555 PF09179 TilS substrate binding domain GPY00_RS09555 PF11734 TilS substrate C-terminal domain GPY00_RS09560 PF00034 Cytochrome c GPY00_RS09565 PF05870 Phenolic acid decarboxylase (PAD) GPY00_RS09570 PF00543 Nitrogen regulatory protein P-II GPY00_RS09575 PF03372 Endonuclease/Exonuclease/phosphatase family GPY00_RS09580 PF01464 Transglycosylase SLT domain GPY00_RS09580 PF01476 LysM domain GPY00_RS09585 PF16123 Hydroxyacylglutathione hydrolase C-terminus GPY00_RS09585 PF00753 Metallo-beta-lactamase superfamily GPY00_RS09590 PF08241 Methyltransferase domain GPY00_RS09595 PF00075 RNase H GPY00_RS09600 PF00929 Exonuclease GPY00_RS09610 PF09317 Domain of unknown function (DUF1974) GPY00_RS09610 PF02770 Acyl-CoA dehydrogenase, middle domain GPY00_RS09610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY00_RS09610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY00_RS09615 PF13580 SIS domain GPY00_RS09620 PF13230 Glutamine amidotransferases class-II GPY00_RS09625 PF00551 Formyl transferase GPY00_RS09630 PF00586 AIR synthase related protein, N-terminal domain GPY00_RS09630 PF02769 AIR synthase related protein, C-terminal domain GPY00_RS09640 PF08448 PAS fold GPY00_RS09640 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS09645 PF01479 S4 domain GPY00_RS09645 PF00849 RNA pseudouridylate synthase GPY00_RS09650 PF01713 Smr domain GPY00_RS09670 PF02838 Glycosyl hydrolase family 20, domain 2 GPY00_RS09670 PF03173 Putative carbohydrate binding domain GPY00_RS09670 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain GPY00_RS09670 PF00728 Glycosyl hydrolase family 20, catalytic domain GPY00_RS09680 PF00403 Heavy-metal-associated domain GPY00_RS09685 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY00_RS09690 PF01389 OmpA-like transmembrane domain GPY00_RS09690 PF00691 OmpA family GPY00_RS09700 PF07715 TonB-dependent Receptor Plug Domain GPY00_RS09705 PF04954 Siderophore-interacting protein GPY00_RS09705 PF08021 Siderophore-interacting FAD-binding domain GPY00_RS09710 PF00501 AMP-binding enzyme GPY00_RS09710 PF00668 Condensation domain GPY00_RS09710 PF00550 Phosphopantetheine attachment site GPY00_RS09710 PF08242 Methyltransferase domain GPY00_RS09745 PF01584 CheW-like domain GPY00_RS09745 PF00072 Response regulator receiver domain GPY00_RS09750 PF01739 CheR methyltransferase, SAM binding domain GPY00_RS09750 PF03705 CheR methyltransferase, all-alpha domain GPY00_RS09755 PF00460 Flagella basal body rod protein GPY00_RS09760 PF00460 Flagella basal body rod protein GPY00_RS09760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY00_RS09765 PF13861 FlgD Tudor-like domain GPY00_RS09765 PF13860 FlgD Ig-like domain GPY00_RS09765 PF03963 Flagellar hook capping protein - N-terminal region GPY00_RS09770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY00_RS09770 PF07559 Flagellar basal body protein FlaE GPY00_RS09770 PF00460 Flagella basal body rod protein GPY00_RS09775 PF00460 Flagella basal body rod protein GPY00_RS09775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY00_RS09780 PF00460 Flagella basal body rod protein GPY00_RS09780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY00_RS09785 PF02107 Flagellar L-ring protein GPY00_RS09790 PF02119 Flagellar P-ring protein GPY00_RS09795 PF10135 Rod binding protein GPY00_RS09795 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GPY00_RS09800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY00_RS09800 PF07196 Flagellin hook IN motif GPY00_RS09815 PF07196 Flagellin hook IN motif GPY00_RS09815 PF00700 Bacterial flagellin C-terminal helical region GPY00_RS09815 PF00669 Bacterial flagellin N-terminal helical region GPY00_RS09820 PF07196 Flagellin hook IN motif GPY00_RS09820 PF00669 Bacterial flagellin N-terminal helical region GPY00_RS09820 PF00700 Bacterial flagellin C-terminal helical region GPY00_RS09905 PF01926 50S ribosome-binding GTPase GPY00_RS09905 PF06071 Protein of unknown function (DUF933) GPY00_RS09910 PF01195 Peptidyl-tRNA hydrolase GPY00_RS09915 PF14572 Phosphoribosyl synthetase-associated domain GPY00_RS09915 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GPY00_RS09920 PF08544 GHMP kinases C terminal GPY00_RS09920 PF00288 GHMP kinases N terminal domain GPY00_RS09925 PF03550 Outer membrane lipoprotein LolB GPY00_RS09930 PF01488 Shikimate / quinate 5-dehydrogenase GPY00_RS09930 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GPY00_RS09930 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GPY00_RS09935 PF03462 PCRF domain GPY00_RS09935 PF00472 RF-1 domain GPY00_RS09940 PF17827 PrmC N-terminal domain GPY00_RS09940 PF13847 Methyltransferase domain GPY00_RS09945 PF04247 Invasion gene expression up-regulator, SirB GPY00_RS09950 PF13369 Transglutaminase-like superfamily GPY00_RS09955 PF00793 DAHP synthetase I family GPY00_RS09960 PF00149 Calcineurin-like phosphoesterase GPY00_RS09960 PF02872 5'-nucleotidase, C-terminal domain GPY00_RS09965 PF04073 Aminoacyl-tRNA editing domain GPY00_RS09970 PF00860 Permease family GPY00_RS09985 PF03358 NADPH-dependent FMN reductase GPY00_RS09990 PF03960 ArsC family GPY00_RS09995 PF01435 Peptidase family M48 GPY00_RS09995 PF13181 Tetratricopeptide repeat GPY00_RS10005 PF01594 AI-2E family transporter GPY00_RS10010 PF02743 Cache domain GPY00_RS10010 PF00672 HAMP domain GPY00_RS10010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS10015 PF00578 AhpC/TSA family GPY00_RS10025 PF00701 Dihydrodipicolinate synthetase family GPY00_RS10030 PF06804 NlpB/DapX lipoprotein GPY00_RS10040 PF02557 D-alanyl-D-alanine carboxypeptidase GPY00_RS10045 PF01546 Peptidase family M20/M25/M40 GPY00_RS10045 PF07687 Peptidase dimerisation domain GPY00_RS10050 PF03960 ArsC family GPY00_RS10065 PF11143 Protein of unknown function (DUF2919) GPY00_RS10070 PF04261 Dyp-type peroxidase family GPY00_RS10075 PF00669 Bacterial flagellin N-terminal helical region GPY00_RS10075 PF07196 Flagellin hook IN motif GPY00_RS10075 PF00700 Bacterial flagellin C-terminal helical region GPY00_RS10080 PF00700 Bacterial flagellin C-terminal helical region GPY00_RS10080 PF00669 Bacterial flagellin N-terminal helical region GPY00_RS10080 PF07196 Flagellin hook IN motif GPY00_RS10085 PF00700 Bacterial flagellin C-terminal helical region GPY00_RS10085 PF00669 Bacterial flagellin N-terminal helical region GPY00_RS10085 PF07196 Flagellin hook IN motif GPY00_RS10090 PF03646 FlaG protein GPY00_RS10095 PF07196 Flagellin hook IN motif GPY00_RS10095 PF07195 Flagellar hook-associated protein 2 C-terminus GPY00_RS10095 PF02465 Flagellar hook-associated protein 2 N-terminus GPY00_RS10105 PF02561 Flagellar protein FliS GPY00_RS10110 PF02954 Bacterial regulatory protein, Fis family GPY00_RS10110 PF00158 Sigma-54 interaction domain GPY00_RS10110 PF00072 Response regulator receiver domain GPY00_RS10115 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS10115 PF13493 Domain of unknown function (DUF4118) GPY00_RS10115 PF08447 PAS fold GPY00_RS10115 PF13426 PAS domain GPY00_RS10115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS10115 PF00989 PAS fold GPY00_RS10120 PF00158 Sigma-54 interaction domain GPY00_RS10120 PF02954 Bacterial regulatory protein, Fis family GPY00_RS10120 PF00072 Response regulator receiver domain GPY00_RS10125 PF02049 Flagellar hook-basal body complex protein FliE GPY00_RS10130 PF08345 Flagellar M-ring protein C-terminal GPY00_RS10130 PF01514 Secretory protein of YscJ/FliF family GPY00_RS10135 PF01706 FliG C-terminal domain GPY00_RS10135 PF14841 FliG middle domain GPY00_RS10135 PF14842 FliG N-terminal domain GPY00_RS10140 PF02108 Flagellar assembly protein FliH GPY00_RS10145 PF18269 T3SS EscN ATPase C-terminal domain GPY00_RS10145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY00_RS10165 PF03748 Flagellar basal body-associated protein FliL GPY00_RS10170 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY00_RS10170 PF02154 Flagellar motor switch protein FliM GPY00_RS10175 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY00_RS10180 PF04347 Flagellar biosynthesis protein, FliO GPY00_RS10185 PF00813 FliP family GPY00_RS10190 PF01313 Bacterial export proteins, family 3 GPY00_RS10195 PF01311 Bacterial export proteins, family 1 GPY00_RS10200 PF01312 FlhB HrpN YscU SpaS Family GPY00_RS10205 PF01713 Smr domain GPY00_RS10210 PF05175 Methyltransferase small domain GPY00_RS10215 PF01264 Chorismate synthase GPY00_RS10220 PF03458 UPF0126 domain GPY00_RS10225 PF04315 Elongation factor P hydroxylase GPY00_RS10230 PF08891 YfcL protein GPY00_RS10235 PF03358 NADPH-dependent FMN reductase GPY00_RS10240 PF01266 FAD dependent oxidoreductase GPY00_RS10240 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GPY00_RS10245 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY00_RS10245 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY00_RS10250 PF11890 Domain of unknown function (DUF3410) GPY00_RS10250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY00_RS10250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY00_RS10255 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY00_RS10255 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY00_RS10260 PF01475 Ferric uptake regulator family GPY00_RS10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS10270 PF03466 LysR substrate binding domain GPY00_RS10275 PF03788 LrgA family GPY00_RS10285 PF00258 Flavodoxin GPY00_RS10295 PF12697 Alpha/beta hydrolase family GPY00_RS10300 PF17206 SeqA protein N-terminal domain GPY00_RS10300 PF03925 SeqA protein C-terminal domain GPY00_RS10305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY00_RS10305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY00_RS10305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY00_RS10305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY00_RS10315 PF01784 NIF3 (NGG1p interacting factor 3) GPY00_RS10320 PF00285 Citrate synthase, C-terminal domain GPY00_RS10325 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GPY00_RS10330 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GPY00_RS10335 PF00890 FAD binding domain GPY00_RS10335 PF02910 Fumarate reductase flavoprotein C-term GPY00_RS10340 PF13085 2Fe-2S iron-sulfur cluster binding domain GPY00_RS10345 PF02779 Transketolase, pyrimidine binding domain GPY00_RS10345 PF16870 2-oxoglutarate dehydrogenase C-terminal GPY00_RS10345 PF16078 2-oxoglutarate dehydrogenase N-terminus GPY00_RS10345 PF00676 Dehydrogenase E1 component GPY00_RS10350 PF02817 e3 binding domain GPY00_RS10350 PF00364 Biotin-requiring enzyme GPY00_RS10350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY00_RS10355 PF08442 ATP-grasp domain GPY00_RS10355 PF00549 CoA-ligase GPY00_RS10360 PF00549 CoA-ligase GPY00_RS10360 PF02629 CoA binding domain GPY00_RS10365 PF00950 ABC 3 transport family GPY00_RS10370 PF00005 ABC transporter GPY00_RS10375 PF01297 Zinc-uptake complex component A periplasmic GPY00_RS10380 PF12833 Helix-turn-helix domain GPY00_RS10380 PF02311 AraC-like ligand binding domain GPY00_RS10385 PF04023 FeoA domain GPY00_RS10390 PF07664 Ferrous iron transport protein B C terminus GPY00_RS10390 PF07670 Nucleoside recognition GPY00_RS10390 PF02421 Ferrous iron transport protein B GPY00_RS10405 PF03485 Arginyl tRNA synthetase N terminal domain GPY00_RS10405 PF00750 tRNA synthetases class I (R) GPY00_RS10405 PF05746 DALR anticodon binding domain GPY00_RS10415 PF00675 Insulinase (Peptidase family M16) GPY00_RS10415 PF05193 Peptidase M16 inactive domain GPY00_RS10420 PF00300 Histidine phosphatase superfamily (branch 1) GPY00_RS10425 PF00771 FHIPEP family GPY00_RS10430 PF00448 SRP54-type protein, GTPase domain GPY00_RS10435 PF10609 NUBPL iron-transfer P-loop NTPase GPY00_RS10440 PF04539 Sigma-70 region 3 GPY00_RS10440 PF04545 Sigma-70, region 4 GPY00_RS10440 PF04542 Sigma-70 region 2 GPY00_RS10445 PF00072 Response regulator receiver domain GPY00_RS10450 PF04344 Chemotaxis phosphatase, CheZ GPY00_RS10455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS10455 PF07194 P2 response regulator binding domain GPY00_RS10455 PF01627 Hpt domain GPY00_RS10455 PF02895 Signal transducing histidine kinase, homodimeric domain GPY00_RS10455 PF01584 CheW-like domain GPY00_RS10460 PF00072 Response regulator receiver domain GPY00_RS10460 PF01339 CheB methylesterase GPY00_RS10465 PF13614 AAA domain GPY00_RS10475 PF01584 CheW-like domain GPY00_RS10485 PF00005 ABC transporter GPY00_RS10490 PF03379 CcmB protein GPY00_RS10495 PF01578 Cytochrome C assembly protein GPY00_RS10500 PF04995 Heme exporter protein D (CcmD) GPY00_RS10505 PF03100 CcmE GPY00_RS10510 PF01578 Cytochrome C assembly protein GPY00_RS10510 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GPY00_RS10515 PF08534 Redoxin GPY00_RS10520 PF03918 Cytochrome C biogenesis protein GPY00_RS10530 PF04333 MlaA lipoprotein GPY00_RS10545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GPY00_RS10545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GPY00_RS10550 PF00462 Glutaredoxin GPY00_RS10555 PF01131 DNA topoisomerase GPY00_RS10555 PF01751 Toprim domain GPY00_RS10560 PF00850 Histone deacetylase domain GPY00_RS10575 PF00884 Sulfatase GPY00_RS10575 PF11893 Domain of unknown function (DUF3413) GPY00_RS10580 PF07208 Protein of unknown function (DUF1414) GPY00_RS10585 PF04245 37-kD nucleoid-associated bacterial protein GPY00_RS10595 PF03553 Na+/H+ antiporter family GPY00_RS10600 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY00_RS10600 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY00_RS10605 PF01914 MarC family integral membrane protein GPY00_RS10610 PF00171 Aldehyde dehydrogenase family GPY00_RS10610 PF00465 Iron-containing alcohol dehydrogenase GPY00_RS10620 PF00916 Sulfate permease family GPY00_RS10620 PF01740 STAS domain GPY00_RS10625 PF00575 S1 RNA binding domain GPY00_RS10625 PF12111 Polyribonucleotide phosphorylase C terminal GPY00_RS10625 PF10150 Ribonuclease E/G family GPY00_RS10630 PF00849 RNA pseudouridylate synthase GPY00_RS10630 PF01479 S4 domain GPY00_RS10635 PF02545 Maf-like protein GPY00_RS10670 PF02620 Large ribosomal RNA subunit accumulation protein YceD GPY00_RS10675 PF01783 Ribosomal L32p protein family GPY00_RS10680 PF02504 Fatty acid synthesis protein GPY00_RS10685 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GPY00_RS10685 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GPY00_RS10690 PF00698 Acyl transferase domain GPY00_RS10700 PF00550 Phosphopantetheine attachment site GPY00_RS10705 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY00_RS10705 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY00_RS10710 PF01063 Amino-transferase class IV GPY00_RS10715 PF02618 YceG-like family GPY00_RS10720 PF02223 Thymidylate kinase GPY00_RS10725 PF09115 DNA polymerase III, delta subunit, C terminal GPY00_RS10730 PF01026 TatD related DNase GPY00_RS10735 PF02378 Phosphotransferase system, EIIC GPY00_RS10735 PF00367 phosphotransferase system, EIIB GPY00_RS10750 PF00209 Sodium:neurotransmitter symporter family GPY00_RS10765 PF01734 Patatin-like phospholipase GPY00_RS10770 PF00224 Pyruvate kinase, barrel domain GPY00_RS10770 PF02887 Pyruvate kinase, alpha/beta domain GPY00_RS10775 PF00480 ROK family GPY00_RS10780 PF01584 CheW-like domain GPY00_RS10780 PF00072 Response regulator receiver domain GPY00_RS10795 PF13847 Methyltransferase domain GPY00_RS10805 PF01263 Aldose 1-epimerase GPY00_RS10810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY00_RS10810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY00_RS10815 PF01641 SelR domain GPY00_RS10825 PF07023 Protein of unknown function (DUF1315) GPY00_RS10830 PF00710 Asparaginase, N-terminal GPY00_RS10830 PF17763 Glutaminase/Asparaginase C-terminal domain GPY00_RS10835 PF01343 Peptidase family S49 GPY00_RS10840 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY00_RS10840 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS10845 PF00551 Formyl transferase GPY00_RS10845 PF01842 ACT domain GPY00_RS10855 PF13307 Helicase C-terminal domain GPY00_RS10855 PF04851 Type III restriction enzyme, res subunit GPY00_RS10860 PF00814 Glycoprotease family GPY00_RS10875 PF00561 alpha/beta hydrolase fold GPY00_RS10880 PF13193 AMP-binding enzyme C-terminal domain GPY00_RS10880 PF00501 AMP-binding enzyme GPY00_RS10885 PF00570 HRDC domain GPY00_RS10885 PF01612 3'-5' exonuclease GPY00_RS10900 PF01966 HD domain GPY00_RS10900 PF13286 Phosphohydrolase-associated domain GPY00_RS10910 PF00155 Aminotransferase class I and II GPY00_RS10915 PF00425 chorismate binding enzyme GPY00_RS10920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY00_RS10920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY00_RS10920 PF16582 Middle domain of thiamine pyrophosphate GPY00_RS10925 PF12697 Alpha/beta hydrolase family GPY00_RS10930 PF00378 Enoyl-CoA hydratase/isomerase GPY00_RS10935 PF13378 Enolase C-terminal domain-like GPY00_RS10940 PF13193 AMP-binding enzyme C-terminal domain GPY00_RS10940 PF00501 AMP-binding enzyme GPY00_RS10945 PF03594 Benzoate membrane transport protein GPY00_RS10950 PF07690 Major Facilitator Superfamily GPY00_RS10970 PF04170 NlpE N-terminal domain GPY00_RS10975 PF03776 Septum formation topological specificity factor MinE GPY00_RS10980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GPY00_RS10985 PF03775 Septum formation inhibitor MinC, C-terminal domain GPY00_RS10985 PF05209 Septum formation inhibitor MinC, N-terminal domain GPY00_RS10990 PF05166 YcgL domain GPY00_RS10995 PF13406 Transglycosylase SLT domain GPY00_RS11000 PF03466 LysR substrate binding domain GPY00_RS11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS11005 PF01773 Na+ dependent nucleoside transporter N-terminus GPY00_RS11005 PF07662 Na+ dependent nucleoside transporter C-terminus GPY00_RS11005 PF07670 Nucleoside recognition GPY00_RS11010 PF00704 Glycosyl hydrolases family 18 GPY00_RS11015 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY00_RS11020 PF00384 Molybdopterin oxidoreductase GPY00_RS11020 PF18364 Molybdopterin oxidoreductase N-terminal domain GPY00_RS11020 PF01568 Molydopterin dinucleotide binding domain GPY00_RS11035 PF03466 LysR substrate binding domain GPY00_RS11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS11040 PF01494 FAD binding domain GPY00_RS11045 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GPY00_RS11050 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GPY00_RS11050 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GPY00_RS11095 PF00563 EAL domain GPY00_RS11095 PF13188 PAS domain GPY00_RS11095 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS11095 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS11110 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GPY00_RS11115 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY00_RS11120 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GPY00_RS11125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY00_RS11130 PF02954 Bacterial regulatory protein, Fis family GPY00_RS11130 PF00158 Sigma-54 interaction domain GPY00_RS11130 PF00072 Response regulator receiver domain GPY00_RS11135 PF02743 Cache domain GPY00_RS11135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS11135 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS11145 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY00_RS11145 PF05697 Bacterial trigger factor protein (TF) GPY00_RS11145 PF05698 Bacterial trigger factor protein (TF) C-terminus GPY00_RS11150 PF00574 Clp protease GPY00_RS11155 PF06689 ClpX C4-type zinc finger GPY00_RS11155 PF10431 C-terminal, D2-small domain, of ClpB protein GPY00_RS11155 PF07724 AAA domain (Cdc48 subfamily) GPY00_RS11160 PF00004 ATPase family associated with various cellular activities (AAA) GPY00_RS11160 PF02190 ATP-dependent protease La (LON) substrate-binding domain GPY00_RS11160 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY00_RS11165 PF00216 Bacterial DNA-binding protein GPY00_RS11170 PF13145 PPIC-type PPIASE domain GPY00_RS11180 PF02224 Cytidylate kinase GPY00_RS11185 PF00575 S1 RNA binding domain GPY00_RS11190 PF00216 Bacterial DNA-binding protein GPY00_RS11195 PF06305 Lipopolysaccharide assembly protein A domain GPY00_RS11200 PF18073 Rubredoxin metal binding domain GPY00_RS11205 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GPY00_RS11210 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GPY00_RS11220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS11220 PF03466 LysR substrate binding domain GPY00_RS11230 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GPY00_RS11230 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GPY00_RS11235 PF01037 Lrp/AsnC ligand binding domain GPY00_RS11245 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GPY00_RS11245 PF01580 FtsK/SpoIIIE family GPY00_RS11245 PF09397 Ftsk gamma domain GPY00_RS11245 PF17854 FtsK alpha domain GPY00_RS11250 PF02600 Disulfide bond formation protein DsbB GPY00_RS11255 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GPY00_RS11260 PF00392 Bacterial regulatory proteins, gntR family GPY00_RS11260 PF07840 FadR C-terminal domain GPY00_RS11270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS11270 PF00672 HAMP domain GPY00_RS11275 PF01230 HIT domain GPY00_RS11290 PF13036 Peptidoglycan-synthase activator LpoB GPY00_RS11290 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GPY00_RS11300 PF05728 Uncharacterised protein family (UPF0227) GPY00_RS11305 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS11315 PF16458 Beta-prism lectin GPY00_RS11315 PF07968 Leukocidin/Hemolysin toxin family GPY00_RS11315 PF12563 Hemolytic toxin N terminal GPY00_RS11325 PF00271 Helicase conserved C-terminal domain GPY00_RS11325 PF17757 UvrB interaction domain GPY00_RS11325 PF03461 TRCF domain GPY00_RS11325 PF00270 DEAD/DEAH box helicase GPY00_RS11325 PF02559 CarD-like/TRCF domain GPY00_RS11335 PF02687 FtsX-like permease family GPY00_RS11335 PF12704 MacB-like periplasmic core domain GPY00_RS11340 PF00005 ABC transporter GPY00_RS11345 PF02687 FtsX-like permease family GPY00_RS11345 PF12704 MacB-like periplasmic core domain GPY00_RS11360 PF00753 Metallo-beta-lactamase superfamily GPY00_RS11360 PF13567 Domain of unknown function (DUF4131) GPY00_RS11360 PF03772 Competence protein GPY00_RS11365 PF00005 ABC transporter GPY00_RS11365 PF00664 ABC transporter transmembrane region GPY00_RS11370 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GPY00_RS11375 PF03966 Trm112p-like protein GPY00_RS11380 PF02348 Cytidylyltransferase GPY00_RS11385 PF04293 SpoVR like protein GPY00_RS11390 PF04285 Protein of unknown function (DUF444) GPY00_RS11395 PF08298 PrkA AAA domain GPY00_RS11395 PF06798 PrkA serine protein kinase C-terminal domain GPY00_RS11400 PF03887 YfbU domain GPY00_RS11410 PF04055 Radical SAM superfamily GPY00_RS11415 PF12729 Four helix bundle sensory module for signal transduction GPY00_RS11415 PF00672 HAMP domain GPY00_RS11415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS11425 PF02901 Pyruvate formate lyase-like GPY00_RS11425 PF01228 Glycine radical GPY00_RS11435 PF00005 ABC transporter GPY00_RS11440 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY00_RS11445 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS11450 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS11455 PF03372 Endonuclease/Exonuclease/phosphatase family GPY00_RS11460 PF10689 Protein of unknown function (DUF2496) GPY00_RS11465 PF07445 Primosomal replication protein priC GPY00_RS11470 PF01925 Sulfite exporter TauE/SafE GPY00_RS11475 PF13307 Helicase C-terminal domain GPY00_RS11475 PF06733 DEAD_2 GPY00_RS11480 PF13609 Gram-negative porin GPY00_RS11485 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GPY00_RS11490 PF02810 SEC-C motif GPY00_RS11495 PF08668 HDOD domain GPY00_RS11495 PF00563 EAL domain GPY00_RS11500 PF00149 Calcineurin-like phosphoesterase GPY00_RS11505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GPY00_RS11510 PF01406 tRNA synthetases class I (C) catalytic domain GPY00_RS11510 PF09190 DALR domain GPY00_RS11515 PF02075 Crossover junction endodeoxyribonuclease RuvC GPY00_RS11520 PF07499 RuvA, C-terminal domain GPY00_RS11520 PF01330 RuvA N terminal domain GPY00_RS11525 PF05491 RuvB C-terminal winged helix domain GPY00_RS11525 PF05496 Holliday junction DNA helicase RuvB P-loop domain GPY00_RS11525 PF17864 RuvB AAA lid domain GPY00_RS11530 PF01654 Cytochrome bd terminal oxidase subunit I GPY00_RS11535 PF02322 Cytochrome bd terminal oxidase subunit II GPY00_RS11540 PF08173 Membrane bound YbgT-like protein GPY00_RS11545 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) GPY00_RS11550 PF03061 Thioesterase superfamily GPY00_RS11555 PF01618 MotA/TolQ/ExbB proton channel family GPY00_RS11560 PF02472 Biopolymer transport protein ExbD/TolR GPY00_RS11570 PF04052 TolB amino-terminal domain GPY00_RS11570 PF07676 WD40-like Beta Propeller Repeat GPY00_RS11575 PF00691 OmpA family GPY00_RS11585 PF02445 Quinolinate synthetase A protein GPY00_RS11595 PF00072 Response regulator receiver domain GPY00_RS11595 PF09308 LuxQ, periplasmic GPY00_RS11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS11595 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS11600 PF06610 L-alanine exporter GPY00_RS11605 PF01238 Phosphomannose isomerase type I GPY00_RS11610 PF02378 Phosphotransferase system, EIIC GPY00_RS11610 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY00_RS11610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY00_RS11615 PF12833 Helix-turn-helix domain GPY00_RS11625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY00_RS11650 PF02954 Bacterial regulatory protein, Fis family GPY00_RS11650 PF01590 GAF domain GPY00_RS11650 PF00158 Sigma-54 interaction domain GPY00_RS11655 PF09905 DNA-binding protein VF530 GPY00_RS11665 PF03441 FAD binding domain of DNA photolyase GPY00_RS11665 PF00875 DNA photolyase GPY00_RS11690 PF13088 BNR repeat-like domain GPY00_RS11690 PF09264 Vibrio cholerae sialidase, lectin insertion GPY00_RS11695 PF01979 Amidohydrolase family GPY00_RS11700 PF00480 ROK family GPY00_RS11705 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase GPY00_RS11715 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY00_RS11720 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GPY00_RS11725 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY00_RS11730 PF00701 Dihydrodipicolinate synthetase family GPY00_RS11735 PF01418 Helix-turn-helix domain, rpiR family GPY00_RS11735 PF01380 SIS domain GPY00_RS11740 PF01344 Kelch motif GPY00_RS11745 PF07646 Kelch motif GPY00_RS11780 PF00561 alpha/beta hydrolase fold GPY00_RS11785 PF03347 Vibrio thermostable direct hemolysin GPY00_RS11790 PF13402 Peptidase M60, enhancin and enhancin-like GPY00_RS11790 PF17291 N-terminal domain of M60-like peptidases GPY00_RS11790 PF13322 Domain of unknown function (DUF4092) GPY00_RS11825 PF01797 Transposase IS200 like GPY00_RS11910 PF00771 FHIPEP family GPY00_RS11915 PF01312 FlhB HrpN YscU SpaS Family GPY00_RS11920 PF00691 OmpA family GPY00_RS11945 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS11955 PF00813 FliP family GPY00_RS11975 PF18269 T3SS EscN ATPase C-terminal domain GPY00_RS11975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY00_RS11975 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY00_RS12020 PF09020 YopE, N terminal GPY00_RS12020 PF03545 Yersinia virulence determinant (YopE) GPY00_RS12035 PF00589 Phage integrase family GPY00_RS12035 PF13356 Arm DNA-binding domain GPY00_RS12045 PF00873 AcrB/AcrD/AcrF family GPY00_RS12050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY00_RS12060 PF02470 MlaD protein GPY00_RS12070 PF05552 Conserved TM helix GPY00_RS12070 PF00924 Mechanosensitive ion channel GPY00_RS12090 PF00440 Bacterial regulatory proteins, tetR family GPY00_RS12090 PF08362 YcdC-like protein, C-terminal region GPY00_RS12095 PF00171 Aldehyde dehydrogenase family GPY00_RS12100 PF07383 Protein of unknown function (DUF1496) GPY00_RS12110 PF16295 Tetracyclin repressor-like, C-terminal domain GPY00_RS12110 PF00440 Bacterial regulatory proteins, tetR family GPY00_RS12115 PF02770 Acyl-CoA dehydrogenase, middle domain GPY00_RS12115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY00_RS12115 PF09317 Domain of unknown function (DUF1974) GPY00_RS12115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY00_RS12120 PF07055 Enoyl reductase FAD binding domain GPY00_RS12120 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GPY00_RS12120 PF12241 Trans-2-enoyl-CoA reductase catalytic region GPY00_RS12125 PF01176 Translation initiation factor 1A / IF-1 GPY00_RS12130 PF04377 Arginine-tRNA-protein transferase, C terminus GPY00_RS12130 PF04376 Arginine-tRNA-protein transferase, N terminus GPY00_RS12135 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GPY00_RS12145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GPY00_RS12150 PF10692 Protein of unknown function (DUF2498) GPY00_RS12155 PF01751 Toprim domain GPY00_RS12155 PF01396 Topoisomerase DNA binding C4 zinc finger GPY00_RS12155 PF08272 Topoisomerase I zinc-ribbon-like GPY00_RS12155 PF01131 DNA topoisomerase GPY00_RS12160 PF00483 Nucleotidyl transferase GPY00_RS12165 PF08323 Starch synthase catalytic domain GPY00_RS12165 PF00534 Glycosyl transferases group 1 GPY00_RS12185 PF04993 TfoX N-terminal domain GPY00_RS12185 PF04994 TfoX C-terminal domain GPY00_RS12190 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS12195 PF02613 Nitrate reductase delta subunit GPY00_RS12200 PF00072 Response regulator receiver domain GPY00_RS12200 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS12205 PF02698 DUF218 domain GPY00_RS12215 PF17192 MukF middle domain GPY00_RS12215 PF17193 MukF C-terminal domain GPY00_RS12215 PF03882 MukF winged-helix domain GPY00_RS12220 PF04288 MukE-like family GPY00_RS12225 PF16330 MukB hinge domain GPY00_RS12225 PF04310 MukB N-terminal GPY00_RS12230 PF00465 Iron-containing alcohol dehydrogenase GPY00_RS12235 PF06719 AraC-type transcriptional regulator N-terminus GPY00_RS12235 PF12833 Helix-turn-helix domain GPY00_RS12245 PF01037 Lrp/AsnC ligand binding domain GPY00_RS12250 PF01810 LysE type translocator GPY00_RS12255 PF04055 Radical SAM superfamily GPY00_RS12255 PF08497 Radical SAM N-terminal GPY00_RS12255 PF11842 Domain of unknown function (DUF3362) GPY00_RS12260 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS12260 PF00563 EAL domain GPY00_RS12260 PF08448 PAS fold GPY00_RS12260 PF08447 PAS fold GPY00_RS12265 PF00675 Insulinase (Peptidase family M16) GPY00_RS12265 PF05193 Peptidase M16 inactive domain GPY00_RS12280 PF03466 LysR substrate binding domain GPY00_RS12280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS12285 PF08267 Cobalamin-independent synthase, N-terminal domain GPY00_RS12285 PF01717 Cobalamin-independent synthase, Catalytic domain GPY00_RS12295 PF03795 YCII-related domain GPY00_RS12300 PF03061 Thioesterase superfamily GPY00_RS12305 PF04279 Intracellular septation protein A GPY00_RS12315 PF02698 DUF218 domain GPY00_RS12320 PF01370 NAD dependent epimerase/dehydratase family GPY00_RS12330 PF01226 Formate/nitrite transporter GPY00_RS12335 PF06796 Periplasmic nitrate reductase protein NapE GPY00_RS12340 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY00_RS12345 PF18364 Molybdopterin oxidoreductase N-terminal domain GPY00_RS12345 PF00384 Molybdopterin oxidoreductase GPY00_RS12345 PF01568 Molydopterin dinucleotide binding domain GPY00_RS12360 PF01368 DHH family GPY00_RS12360 PF02833 DHHA2 domain GPY00_RS12375 PF00005 ABC transporter GPY00_RS12380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY00_RS12380 PF00005 ABC transporter GPY00_RS12385 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS12385 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY00_RS12390 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS12395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY00_RS12400 PF02954 Bacterial regulatory protein, Fis family GPY00_RS12400 PF00158 Sigma-54 interaction domain GPY00_RS12405 PF04012 PspA/IM30 family GPY00_RS12420 PF00529 HlyD membrane-fusion protein of T1SS GPY00_RS12420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY00_RS12425 PF13533 Biotin-lipoyl like GPY00_RS12430 PF00873 AcrB/AcrD/AcrF family GPY00_RS12435 PF03352 Methyladenine glycosylase GPY00_RS12440 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY00_RS12445 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY00_RS12450 PF13396 Phospholipase_D-nuclease N-terminal GPY00_RS12450 PF13091 PLD-like domain GPY00_RS12455 PF00209 Sodium:neurotransmitter symporter family GPY00_RS12460 PF00849 RNA pseudouridylate synthase GPY00_RS12465 PF01066 CDP-alcohol phosphatidyltransferase GPY00_RS12470 PF00005 ABC transporter GPY00_RS12475 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS12480 PF13416 Bacterial extracellular solute-binding protein GPY00_RS12490 PF06945 Protein of unknown function (DUF1289) GPY00_RS12505 PF00005 ABC transporter GPY00_RS12510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY00_RS12515 PF03222 Tryptophan/tyrosine permease family GPY00_RS12525 PF00571 CBS domain GPY00_RS12525 PF01769 Divalent cation transporter GPY00_RS12525 PF03448 MgtE intracellular N domain GPY00_RS12530 PF09308 LuxQ, periplasmic GPY00_RS12530 PF00072 Response regulator receiver domain GPY00_RS12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS12530 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS12535 PF00563 EAL domain GPY00_RS12535 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS12535 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS12545 PF01752 Collagenase GPY00_RS12545 PF08453 Peptidase family M9 N-terminal GPY00_RS12545 PF04151 Bacterial pre-peptidase C-terminal domain GPY00_RS12555 PF12793 Sugar transport-related sRNA regulator N-term GPY00_RS12555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY00_RS12570 PF09009 Exotoxin A catalytic GPY00_RS12570 PF09102 Exotoxin A, targeting GPY00_RS12570 PF09101 Exotoxin A binding GPY00_RS12585 PF00563 EAL domain GPY00_RS12585 PF00360 Phytochrome region GPY00_RS12585 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS12585 PF01590 GAF domain GPY00_RS12590 PF01386 Ribosomal L25p family GPY00_RS12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS12595 PF00989 PAS fold GPY00_RS12595 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS12595 PF11808 Phosphate regulon sensor protein PhoR GPY00_RS12600 PF00072 Response regulator receiver domain GPY00_RS12600 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS12610 PF04851 Type III restriction enzyme, res subunit GPY00_RS12610 PF00271 Helicase conserved C-terminal domain GPY00_RS12615 PF00849 RNA pseudouridylate synthase GPY00_RS12615 PF01479 S4 domain GPY00_RS12620 PF07690 Major Facilitator Superfamily GPY00_RS12630 PF13460 NAD(P)H-binding GPY00_RS12630 PF11066 Protein of unknown function (DUF2867) GPY00_RS12635 PF01554 MatE GPY00_RS12640 PF00005 ABC transporter GPY00_RS12655 PF06965 Na+/H+ antiporter 1 GPY00_RS12660 PF00202 Aminotransferase class-III GPY00_RS12665 PF16653 Saccharopine dehydrogenase C-terminal domain GPY00_RS12665 PF03435 Saccharopine dehydrogenase NADP binding domain GPY00_RS12675 PF00691 OmpA family GPY00_RS12675 PF05736 OprF membrane domain GPY00_RS12680 PF02321 Outer membrane efflux protein GPY00_RS12690 PF01609 Transposase DDE domain GPY00_RS12690 PF13006 Insertion element 4 transposase N-terminal GPY00_RS12705 PF03466 LysR substrate binding domain GPY00_RS12705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS12715 PF01863 Protein of unknown function DUF45 GPY00_RS12720 PF05971 RNA methyltransferase GPY00_RS12735 PF04204 Homoserine O-succinyltransferase GPY00_RS12755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY00_RS12770 PF17203 Single cache domain 3 GPY00_RS12770 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GPY00_RS12770 PF00989 PAS fold GPY00_RS12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS12775 PF00072 Response regulator receiver domain GPY00_RS12785 PF01584 CheW-like domain GPY00_RS12785 PF00072 Response regulator receiver domain GPY00_RS12805 PF00072 Response regulator receiver domain GPY00_RS12805 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS12825 PF07690 Major Facilitator Superfamily GPY00_RS12830 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GPY00_RS12830 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GPY00_RS12835 PF08544 GHMP kinases C terminal GPY00_RS12835 PF00288 GHMP kinases N terminal domain GPY00_RS12835 PF10509 Galactokinase galactose-binding signature GPY00_RS12840 PF01263 Aldose 1-epimerase GPY00_RS12845 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS12850 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS12850 PF00672 HAMP domain GPY00_RS12850 PF00563 EAL domain GPY00_RS12850 PF17154 Gammaproteobacterial periplasmic sensor domain GPY00_RS12860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY00_RS12860 PF00205 Thiamine pyrophosphate enzyme, central domain GPY00_RS12860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY00_RS12865 PF03306 Alpha-acetolactate decarboxylase GPY00_RS12875 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GPY00_RS12880 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GPY00_RS12880 PF00361 Proton-conducting membrane transporter GPY00_RS12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS12885 PF03466 LysR substrate binding domain GPY00_RS12890 PF00501 AMP-binding enzyme GPY00_RS12890 PF13193 AMP-binding enzyme C-terminal domain GPY00_RS12920 PF00206 Lyase GPY00_RS12920 PF10415 Fumarase C C-terminus GPY00_RS12930 PF01654 Cytochrome bd terminal oxidase subunit I GPY00_RS12935 PF02322 Cytochrome bd terminal oxidase subunit II GPY00_RS12940 PF12704 MacB-like periplasmic core domain GPY00_RS12940 PF00005 ABC transporter GPY00_RS12940 PF02687 FtsX-like permease family GPY00_RS12945 PF00005 ABC transporter GPY00_RS12945 PF02687 FtsX-like permease family GPY00_RS12945 PF12704 MacB-like periplasmic core domain GPY00_RS12950 PF02687 FtsX-like permease family GPY00_RS12950 PF12704 MacB-like periplasmic core domain GPY00_RS12950 PF00005 ABC transporter GPY00_RS12960 PF00529 HlyD membrane-fusion protein of T1SS GPY00_RS12970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS12970 PF03466 LysR substrate binding domain GPY00_RS12975 PF00141 Peroxidase GPY00_RS12980 PF00232 Glycosyl hydrolase family 1 GPY00_RS12985 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS12990 PF01042 Endoribonuclease L-PSP GPY00_RS12995 PF04074 YhcH/YjgK/YiaL GPY00_RS13000 PF03009 Glycerophosphoryl diester phosphodiesterase family GPY00_RS13005 PF08220 DeoR-like helix-turn-helix domain GPY00_RS13005 PF00455 DeoR C terminal sensor domain GPY00_RS13010 PF00005 ABC transporter GPY00_RS13010 PF17912 MalK OB fold domain GPY00_RS13015 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS13020 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS13025 PF13416 Bacterial extracellular solute-binding protein GPY00_RS13035 PF01618 MotA/TolQ/ExbB proton channel family GPY00_RS13040 PF01618 MotA/TolQ/ExbB proton channel family GPY00_RS13045 PF02472 Biopolymer transport protein ExbD/TolR GPY00_RS13050 PF03544 Gram-negative bacterial TonB protein C-terminal GPY00_RS13060 PF01068 ATP dependent DNA ligase domain GPY00_RS13060 PF14743 DNA ligase OB-like domain GPY00_RS13070 PF01554 MatE GPY00_RS13090 PF00877 NlpC/P60 family GPY00_RS13095 PF12729 Four helix bundle sensory module for signal transduction GPY00_RS13095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS13095 PF00672 HAMP domain GPY00_RS13110 PF00480 ROK family GPY00_RS13120 PF03454 MoeA C-terminal region (domain IV) GPY00_RS13120 PF03453 MoeA N-terminal region (domain I and II) GPY00_RS13120 PF00994 Probable molybdopterin binding domain GPY00_RS13125 PF12804 MobA-like NTP transferase domain GPY00_RS13130 PF08402 TOBE domain GPY00_RS13130 PF00005 ABC transporter GPY00_RS13135 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS13140 PF12849 PBP superfamily domain GPY00_RS13145 PF02954 Bacterial regulatory protein, Fis family GPY00_RS13145 PF00072 Response regulator receiver domain GPY00_RS13145 PF00158 Sigma-54 interaction domain GPY00_RS13150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS13150 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS13150 PF00989 PAS fold GPY00_RS13155 PF12848 ABC transporter GPY00_RS13155 PF00005 ABC transporter GPY00_RS13160 PF02634 FdhD/NarQ family GPY00_RS13180 PF02613 Nitrate reductase delta subunit GPY00_RS13190 PF00384 Molybdopterin oxidoreductase GPY00_RS13190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY00_RS13190 PF01568 Molydopterin dinucleotide binding domain GPY00_RS13195 PF13247 4Fe-4S dicluster domain GPY00_RS13210 PF02146 Sir2 family GPY00_RS13215 PF04461 Protein of unknown function (DUF520) GPY00_RS13220 PF00793 DAHP synthetase I family GPY00_RS13235 PF17783 CvfB-like winged helix domain GPY00_RS13235 PF13509 S1 domain GPY00_RS13240 PF01189 16S rRNA methyltransferase RsmB/F GPY00_RS13240 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GPY00_RS13240 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GPY00_RS13245 PF02470 MlaD protein GPY00_RS13250 PF04403 Paraquat-inducible protein A GPY00_RS13255 PF00664 ABC transporter transmembrane region GPY00_RS13255 PF00005 ABC transporter GPY00_RS13260 PF13185 GAF domain GPY00_RS13265 PF04352 ProQ/FINO family GPY00_RS13265 PF17516 ProQ C-terminal domain GPY00_RS13270 PF17804 Tail specific protease N-terminal domain GPY00_RS13270 PF03572 Peptidase family S41 GPY00_RS13270 PF00595 PDZ domain GPY00_RS13270 PF11818 C-terminal domain of tail specific protease (DUF3340) GPY00_RS13280 PF11940 Domain of unknown function (DUF3458) Ig-like fold GPY00_RS13280 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GPY00_RS13280 PF01433 Peptidase family M1 domain GPY00_RS13290 PF05088 Bacterial NAD-glutamate dehydrogenase GPY00_RS13295 PF01180 Dihydroorotate dehydrogenase GPY00_RS13300 PF07126 Cell-division protein ZapC GPY00_RS13305 PF02926 THUMP domain GPY00_RS13305 PF10672 S-adenosylmethionine-dependent methyltransferase GPY00_RS13305 PF01170 Putative RNA methylase family UPF0020 GPY00_RS13325 PF04957 Ribosome modulation factor GPY00_RS13330 PF07977 FabA-like domain GPY00_RS13335 PF13654 AAA domain GPY00_RS13335 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY00_RS13340 PF17414 MatP C-terminal ribbon-helix-helix domain GPY00_RS13340 PF06303 MatP N-terminal domain GPY00_RS13410 PF05840 Bacteriophage replication gene A protein (GPA) GPY00_RS13425 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII GPY00_RS13430 PF10734 Protein of unknown function (DUF2523) GPY00_RS13435 PF05707 Zonular occludens toxin (Zot) GPY00_RS13440 PF01375 Heat-labile enterotoxin alpha chain GPY00_RS13445 PF01376 Heat-labile enterotoxin beta chain GPY00_RS13500 PF11713 Peptidase C80 family GPY00_RS13500 PF07634 RtxA repeat GPY00_RS13500 PF16671 Actin cross-linking domain GPY00_RS13500 PF11647 Membrane Localization Domain GPY00_RS13500 PF12146 Serine aminopeptidase, S33 GPY00_RS13505 PF02794 RTX toxin acyltransferase family GPY00_RS13515 PF00005 ABC transporter GPY00_RS13515 PF00664 ABC transporter transmembrane region GPY00_RS13515 PF03412 Peptidase C39 family GPY00_RS13525 PF00664 ABC transporter transmembrane region GPY00_RS13525 PF00005 ABC transporter GPY00_RS13525 PF03412 Peptidase C39 family GPY00_RS13530 PF00072 Response regulator receiver domain GPY00_RS13530 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS13530 PF09308 LuxQ, periplasmic GPY00_RS13530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS13545 PF00115 Cytochrome C and Quinol oxidase polypeptide I GPY00_RS13560 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY00_RS13560 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GPY00_RS13570 PF00403 Heavy-metal-associated domain GPY00_RS13585 PF13545 Crp-like helix-turn-helix domain GPY00_RS13585 PF00027 Cyclic nucleotide-binding domain GPY00_RS13590 PF00582 Universal stress protein family GPY00_RS13595 PF01171 PP-loop family GPY00_RS13615 PF08402 TOBE domain GPY00_RS13615 PF00005 ABC transporter GPY00_RS13620 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS13625 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS13630 PF13416 Bacterial extracellular solute-binding protein GPY00_RS13635 PF13416 Bacterial extracellular solute-binding protein GPY00_RS13640 PF01609 Transposase DDE domain GPY00_RS13640 PF13006 Insertion element 4 transposase N-terminal GPY00_RS13655 PF01235 Sodium:alanine symporter family GPY00_RS13660 PF01810 LysE type translocator GPY00_RS13680 PF16671 Actin cross-linking domain GPY00_RS13680 PF04717 Type VI secretion system, phage-baseplate injector GPY00_RS13685 PF05638 Type VI secretion system effector, Hcp GPY00_RS13690 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GPY00_RS13695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS13695 PF02743 Cache domain GPY00_RS13695 PF00672 HAMP domain GPY00_RS13700 PF07690 Major Facilitator Superfamily GPY00_RS13705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY00_RS13705 PF00529 HlyD membrane-fusion protein of T1SS GPY00_RS13720 PF13006 Insertion element 4 transposase N-terminal GPY00_RS13720 PF01609 Transposase DDE domain GPY00_RS13725 PF00270 DEAD/DEAH box helicase GPY00_RS13725 PF00271 Helicase conserved C-terminal domain GPY00_RS13730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS13730 PF08447 PAS fold GPY00_RS13730 PF13426 PAS domain GPY00_RS13735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS13735 PF00672 HAMP domain GPY00_RS13735 PF02203 Tar ligand binding domain homologue GPY00_RS13740 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS13740 PF02743 Cache domain GPY00_RS13740 PF00672 HAMP domain GPY00_RS13745 PF01584 CheW-like domain GPY00_RS13750 PF00072 Response regulator receiver domain GPY00_RS13750 PF01339 CheB methylesterase GPY00_RS13760 PF01739 CheR methyltransferase, SAM binding domain GPY00_RS13760 PF03705 CheR methyltransferase, all-alpha domain GPY00_RS13765 PF00072 Response regulator receiver domain GPY00_RS13765 PF01584 CheW-like domain GPY00_RS13765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS13765 PF01627 Hpt domain GPY00_RS13770 PF07194 P2 response regulator binding domain GPY00_RS13770 PF01627 Hpt domain GPY00_RS13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS13770 PF02895 Signal transducing histidine kinase, homodimeric domain GPY00_RS13770 PF01584 CheW-like domain GPY00_RS13780 PF00072 Response regulator receiver domain GPY00_RS13785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS13785 PF00672 HAMP domain GPY00_RS13790 PF00893 Small Multidrug Resistance protein GPY00_RS13795 PF00875 DNA photolyase GPY00_RS13795 PF03441 FAD binding domain of DNA photolyase GPY00_RS13800 PF07690 Major Facilitator Superfamily GPY00_RS13805 PF03466 LysR substrate binding domain GPY00_RS13805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS13815 PF01979 Amidohydrolase family GPY00_RS13820 PF10437 Bacterial lipoate protein ligase C-terminus GPY00_RS13820 PF03099 Biotin/lipoate A/B protein ligase family GPY00_RS13825 PF00012 Hsp70 protein GPY00_RS13835 PF04408 Helicase associated domain (HA2) GPY00_RS13835 PF11898 Domain of unknown function (DUF3418) GPY00_RS13835 PF00270 DEAD/DEAH box helicase GPY00_RS13835 PF00271 Helicase conserved C-terminal domain GPY00_RS13835 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GPY00_RS13860 PF00563 EAL domain GPY00_RS13860 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS13860 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS13870 PF00012 Hsp70 protein GPY00_RS13875 PF00012 Hsp70 protein GPY00_RS13880 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS13880 PF17158 Membrane-associated sensor, integral membrane domain GPY00_RS13890 PF00563 EAL domain GPY00_RS13890 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS13890 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS13910 PF06508 Queuosine biosynthesis protein QueC GPY00_RS13915 PF04055 Radical SAM superfamily GPY00_RS13925 PF10414 Sirohaem synthase dimerisation region GPY00_RS13925 PF14824 Sirohaem biosynthesis protein central GPY00_RS13925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY00_RS13930 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY00_RS13935 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS13940 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS13945 PF00005 ABC transporter GPY00_RS13950 PF01027 Inhibitor of apoptosis-promoting Bax1 GPY00_RS13955 PF04358 DsrC like protein GPY00_RS13960 PF00708 Acylphosphatase GPY00_RS13965 PF10672 S-adenosylmethionine-dependent methyltransferase GPY00_RS13965 PF17785 PUA-like domain GPY00_RS13970 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS13975 PF08534 Redoxin GPY00_RS13975 PF00462 Glutaredoxin GPY00_RS13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS13980 PF00672 HAMP domain GPY00_RS13980 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY00_RS13980 PF00072 Response regulator receiver domain GPY00_RS13980 PF01627 Hpt domain GPY00_RS13980 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS13985 PF00072 Response regulator receiver domain GPY00_RS13990 PF02798 Glutathione S-transferase, N-terminal domain GPY00_RS13990 PF14497 Glutathione S-transferase, C-terminal domain GPY00_RS14000 PF04209 homogentisate 1,2-dioxygenase GPY00_RS14005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY00_RS14010 PF07687 Peptidase dimerisation domain GPY00_RS14010 PF01546 Peptidase family M20/M25/M40 GPY00_RS14025 PF13193 AMP-binding enzyme C-terminal domain GPY00_RS14025 PF16177 Acetyl-coenzyme A synthetase N-terminus GPY00_RS14025 PF00501 AMP-binding enzyme GPY00_RS14030 PF04303 PrpF protein GPY00_RS14035 PF00330 Aconitase family (aconitate hydratase) GPY00_RS14035 PF00694 Aconitase C-terminal domain GPY00_RS14040 PF00285 Citrate synthase, C-terminal domain GPY00_RS14050 PF00392 Bacterial regulatory proteins, gntR family GPY00_RS14050 PF07729 FCD domain GPY00_RS14065 PF01970 Tripartite tricarboxylate transporter TctA family GPY00_RS14080 PF02653 Branched-chain amino acid transport system / permease component GPY00_RS14085 PF00005 ABC transporter GPY00_RS14090 PF13407 Periplasmic binding protein domain GPY00_RS14110 PF00072 Response regulator receiver domain GPY00_RS14110 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS14115 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS14115 PF00672 HAMP domain GPY00_RS14120 PF06629 MltA-interacting protein MipA GPY00_RS14125 PF04393 Protein of unknown function (DUF535) GPY00_RS14140 PF12833 Helix-turn-helix domain GPY00_RS14145 PF00171 Aldehyde dehydrogenase family GPY00_RS14145 PF14850 DNA-binding domain of Proline dehydrogenase GPY00_RS14145 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GPY00_RS14145 PF01619 Proline dehydrogenase GPY00_RS14155 PF00474 Sodium:solute symporter family GPY00_RS14165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS14165 PF00672 HAMP domain GPY00_RS14165 PF02743 Cache domain GPY00_RS14170 PF01037 Lrp/AsnC ligand binding domain GPY00_RS14175 PF00171 Aldehyde dehydrogenase family GPY00_RS14205 PF03472 Autoinducer binding domain GPY00_RS14205 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS14215 PF01276 Orn/Lys/Arg decarboxylase, major domain GPY00_RS14215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GPY00_RS14215 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GPY00_RS14220 PF13520 Amino acid permease GPY00_RS14225 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GPY00_RS14230 PF04013 Putative SAM-dependent RNA methyltransferase GPY00_RS14235 PF03466 LysR substrate binding domain GPY00_RS14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS14240 PF00106 short chain dehydrogenase GPY00_RS14250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS14250 PF03466 LysR substrate binding domain GPY00_RS14255 PF13460 NAD(P)H-binding GPY00_RS14280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY00_RS14285 PF05068 Mannitol repressor GPY00_RS14290 PF08125 Mannitol dehydrogenase C-terminal domain GPY00_RS14290 PF01232 Mannitol dehydrogenase Rossmann domain GPY00_RS14295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY00_RS14295 PF02378 Phosphotransferase system, EIIC GPY00_RS14295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY00_RS14305 PF01551 Peptidase family M23 GPY00_RS14305 PF04225 Opacity-associated protein A LysM-like domain GPY00_RS14315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY00_RS14315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY00_RS14315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY00_RS14315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY00_RS14320 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS14325 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY00_RS14330 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS14335 PF00005 ABC transporter GPY00_RS14340 PF00793 DAHP synthetase I family GPY00_RS14350 PF00672 HAMP domain GPY00_RS14350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS14360 PF12729 Four helix bundle sensory module for signal transduction GPY00_RS14360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS14360 PF00672 HAMP domain GPY00_RS14370 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY00_RS14370 PF00128 Alpha amylase, catalytic domain GPY00_RS14375 PF02264 LamB porin GPY00_RS14380 PF07148 Maltose operon periplasmic protein precursor (MalM) GPY00_RS14390 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GPY00_RS14410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS14410 PF03466 LysR substrate binding domain GPY00_RS14415 PF07681 DoxX GPY00_RS14420 PF06029 AlkA N-terminal domain GPY00_RS14420 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY00_RS14425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY00_RS14425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GPY00_RS14435 PF03600 Citrate transporter GPY00_RS14440 PF07670 Nucleoside recognition GPY00_RS14445 PF07670 Nucleoside recognition GPY00_RS14450 PF00462 Glutaredoxin GPY00_RS14455 PF00892 EamA-like transporter family GPY00_RS14460 PF13609 Gram-negative porin GPY00_RS14465 PF02566 OsmC-like protein GPY00_RS14470 PF01047 MarR family GPY00_RS14475 PF01557 Fumarylacetoacetate (FAA) hydrolase family GPY00_RS14490 PF12833 Helix-turn-helix domain GPY00_RS14495 PF01810 LysE type translocator GPY00_RS14505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY00_RS14530 PF02627 Carboxymuconolactone decarboxylase family GPY00_RS14540 PF00271 Helicase conserved C-terminal domain GPY00_RS14540 PF00270 DEAD/DEAH box helicase GPY00_RS14545 PF01554 MatE GPY00_RS14550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS14550 PF08447 PAS fold GPY00_RS14555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GPY00_RS14555 PF02896 PEP-utilising enzyme, TIM barrel domain GPY00_RS14555 PF00391 PEP-utilising enzyme, mobile domain GPY00_RS14560 PF03618 Kinase/pyrophosphorylase GPY00_RS14570 PF01070 FMN-dependent dehydrogenase GPY00_RS14575 PF02652 L-lactate permease GPY00_RS14580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS14580 PF03466 LysR substrate binding domain GPY00_RS14590 PF17200 Single Cache domain 2 GPY00_RS14590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS14590 PF00672 HAMP domain GPY00_RS14595 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY00_RS14600 PF00005 ABC transporter GPY00_RS14600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY00_RS14610 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY00_RS14610 PF13654 AAA domain GPY00_RS14615 PF12729 Four helix bundle sensory module for signal transduction GPY00_RS14615 PF00672 HAMP domain GPY00_RS14615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS14625 PF07690 Major Facilitator Superfamily GPY00_RS14635 PF06865 Pyrimidine/purine nucleoside phosphorylase GPY00_RS14640 PF02678 Pirin GPY00_RS14640 PF05726 Pirin C-terminal cupin domain GPY00_RS14650 PF00563 EAL domain GPY00_RS14650 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS14655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS14655 PF03466 LysR substrate binding domain GPY00_RS14675 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS14675 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS14675 PF00563 EAL domain GPY00_RS14690 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS14695 PF01047 MarR family GPY00_RS14700 PF00072 Response regulator receiver domain GPY00_RS14700 PF01584 CheW-like domain GPY00_RS14710 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS14715 PF01906 Putative heavy-metal-binding GPY00_RS14730 PF13302 Acetyltransferase (GNAT) domain GPY00_RS14735 PF08402 TOBE domain GPY00_RS14735 PF00005 ABC transporter GPY00_RS14740 PF01547 Bacterial extracellular solute-binding protein GPY00_RS14745 PF14785 Maltose transport system permease protein MalF P2 domain GPY00_RS14745 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS14750 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS14765 PF08220 DeoR-like helix-turn-helix domain GPY00_RS14765 PF00455 DeoR C terminal sensor domain GPY00_RS14770 PF08448 PAS fold GPY00_RS14770 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS14780 PF00072 Response regulator receiver domain GPY00_RS14780 PF12833 Helix-turn-helix domain GPY00_RS14795 PF00313 'Cold-shock' DNA-binding domain GPY00_RS14805 PF05661 Protein of unknown function (DUF808) GPY00_RS14810 PF05958 tRNA (Uracil-5-)-methyltransferase GPY00_RS14815 PF01979 Amidohydrolase family GPY00_RS14820 PF03473 MOSC domain GPY00_RS14820 PF03476 MOSC N-terminal beta barrel domain GPY00_RS14820 PF03473 MOSC domain GPY00_RS14820 PF03476 MOSC N-terminal beta barrel domain GPY00_RS14820 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY00_RS14820 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY00_RS14825 PF00672 HAMP domain GPY00_RS14825 PF02743 Cache domain GPY00_RS14825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS14855 PF00005 ABC transporter GPY00_RS14860 PF01032 FecCD transport family GPY00_RS14870 PF02472 Biopolymer transport protein ExbD/TolR GPY00_RS14875 PF01618 MotA/TolQ/ExbB proton channel family GPY00_RS14880 PF03544 Gram-negative bacterial TonB protein C-terminal GPY00_RS14885 PF04055 Radical SAM superfamily GPY00_RS14890 PF06228 Haem utilisation ChuX/HutX GPY00_RS14895 PF01243 Pyridoxamine 5'-phosphate oxidase GPY00_RS14900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS14900 PF00672 HAMP domain GPY00_RS14905 PF17853 GGDEF-like domain GPY00_RS14905 PF13556 PucR C-terminal helix-turn-helix domain GPY00_RS14905 PF05651 Putative sugar diacid recognition GPY00_RS14910 PF02447 GntP family permease GPY00_RS14915 PF02595 Glycerate kinase family GPY00_RS14940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GPY00_RS14940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY00_RS14945 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GPY00_RS14950 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GPY00_RS14950 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GPY00_RS14955 PF01966 HD domain GPY00_RS14980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY00_RS14985 PF03466 LysR substrate binding domain GPY00_RS14985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS14990 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY00_RS14995 PF00155 Aminotransferase class I and II GPY00_RS15000 PF08240 Alcohol dehydrogenase GroES-like domain GPY00_RS15000 PF00107 Zinc-binding dehydrogenase GPY00_RS15005 PF13411 MerR HTH family regulatory protein GPY00_RS15020 PF03466 LysR substrate binding domain GPY00_RS15020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS15025 PF00291 Pyridoxal-phosphate dependent enzyme GPY00_RS15035 PF00313 'Cold-shock' DNA-binding domain GPY00_RS15040 PF17876 Cold shock domain GPY00_RS15040 PF00575 S1 RNA binding domain GPY00_RS15040 PF08461 Ribonuclease R winged-helix domain GPY00_RS15040 PF00773 RNB domain GPY00_RS15040 PF08206 Ribonuclease B OB domain GPY00_RS15045 PF00768 D-alanyl-D-alanine carboxypeptidase GPY00_RS15055 PF03922 OmpW family GPY00_RS15065 PF02868 Thermolysin metallopeptidase, alpha-helical domain GPY00_RS15065 PF04151 Bacterial pre-peptidase C-terminal domain GPY00_RS15065 PF01447 Thermolysin metallopeptidase, catalytic domain GPY00_RS15065 PF03413 Peptidase propeptide and YPEB domain GPY00_RS15065 PF07504 Fungalysin/Thermolysin Propeptide Motif GPY00_RS15070 PF13426 PAS domain GPY00_RS15070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS15070 PF08447 PAS fold GPY00_RS15075 PF12262 Bacterial virulence factor lipase N-terminal GPY00_RS15080 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY00_RS15090 PF00128 Alpha amylase, catalytic domain GPY00_RS15095 PF00248 Aldo/keto reductase family GPY00_RS15110 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS15115 PF13520 Amino acid permease GPY00_RS15120 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS15140 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY00_RS15140 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY00_RS15145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY00_RS15150 PF02566 OsmC-like protein GPY00_RS15155 PF00571 CBS domain GPY00_RS15155 PF03471 Transporter associated domain GPY00_RS15155 PF01595 Cyclin M transmembrane N-terminal domain GPY00_RS15160 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GPY00_RS15160 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS15160 PF14602 Hexapeptide repeat of succinyl-transferase GPY00_RS15165 PF00892 EamA-like transporter family GPY00_RS15175 PF03466 LysR substrate binding domain GPY00_RS15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS15195 PF00501 AMP-binding enzyme GPY00_RS15195 PF13193 AMP-binding enzyme C-terminal domain GPY00_RS15200 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GPY00_RS15205 PF01329 Pterin 4 alpha carbinolamine dehydratase GPY00_RS15210 PF00583 Acetyltransferase (GNAT) family GPY00_RS15215 PF00202 Aminotransferase class-III GPY00_RS15220 PF06339 Ectoine synthase GPY00_RS15225 PF00696 Amino acid kinase family GPY00_RS15225 PF13840 ACT domain GPY00_RS15235 PF00118 TCP-1/cpn60 chaperonin family GPY00_RS15240 PF00166 Chaperonin 10 Kd subunit GPY00_RS15245 PF03448 MgtE intracellular N domain GPY00_RS15245 PF01769 Divalent cation transporter GPY00_RS15245 PF00571 CBS domain GPY00_RS15260 PF17810 Arginine decarboxylase helical bundle domain GPY00_RS15260 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY00_RS15260 PF17944 Arginine decarboxylase C-terminal helical extension GPY00_RS15265 PF00491 Arginase family GPY00_RS15270 PF04151 Bacterial pre-peptidase C-terminal domain GPY00_RS15270 PF04389 Peptidase family M28 GPY00_RS15275 PF04151 Bacterial pre-peptidase C-terminal domain GPY00_RS15275 PF07504 Fungalysin/Thermolysin Propeptide Motif GPY00_RS15275 PF02868 Thermolysin metallopeptidase, alpha-helical domain GPY00_RS15275 PF01447 Thermolysin metallopeptidase, catalytic domain GPY00_RS15275 PF03413 Peptidase propeptide and YPEB domain GPY00_RS15280 PF18416 N-acetylglucosamine binding protein domain 2 GPY00_RS15280 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GPY00_RS15285 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GPY00_RS15290 PF01575 MaoC like domain GPY00_RS15295 PF12849 PBP superfamily domain GPY00_RS15305 PF08206 Ribonuclease B OB domain GPY00_RS15305 PF00575 S1 RNA binding domain GPY00_RS15305 PF00773 RNB domain GPY00_RS15310 PF00270 DEAD/DEAH box helicase GPY00_RS15310 PF00271 Helicase conserved C-terminal domain GPY00_RS15310 PF03880 DbpA RNA binding domain GPY00_RS15320 PF00884 Sulfatase GPY00_RS15325 PF00294 pfkB family carbohydrate kinase GPY00_RS15340 PF13419 Haloacid dehalogenase-like hydrolase GPY00_RS15355 PF00226 DnaJ domain GPY00_RS15355 PF00684 DnaJ central domain GPY00_RS15355 PF01556 DnaJ C terminal domain GPY00_RS15370 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS15370 PF00498 FHA domain GPY00_RS15370 PF00563 EAL domain GPY00_RS15375 PF07055 Enoyl reductase FAD binding domain GPY00_RS15375 PF12241 Trans-2-enoyl-CoA reductase catalytic region GPY00_RS15375 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GPY00_RS15380 PF13472 GDSL-like Lipase/Acylhydrolase family GPY00_RS15385 PF00005 ABC transporter GPY00_RS15395 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GPY00_RS15395 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GPY00_RS15405 PF02626 Carboxyltransferase domain, subdomain A and B GPY00_RS15415 PF03746 LamB/YcsF family GPY00_RS15420 PF16363 GDP-mannose 4,6 dehydratase GPY00_RS15425 PF00672 HAMP domain GPY00_RS15425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS15425 PF02743 Cache domain GPY00_RS15430 PF03222 Tryptophan/tyrosine permease family GPY00_RS15440 PF04336 Acyl carrier protein phosphodiesterase GPY00_RS15445 PF00271 Helicase conserved C-terminal domain GPY00_RS15445 PF00270 DEAD/DEAH box helicase GPY00_RS15450 PF00440 Bacterial regulatory proteins, tetR family GPY00_RS15450 PF08361 MAATS-type transcriptional repressor, C-terminal region GPY00_RS15455 PF00034 Cytochrome c GPY00_RS15460 PF01212 Beta-eliminating lyase GPY00_RS15465 PF00293 NUDIX domain GPY00_RS15470 PF17868 AAA lid domain GPY00_RS15470 PF07728 AAA domain (dynein-related subfamily) GPY00_RS15470 PF12592 Protein of unknown function (DUF3763) GPY00_RS15475 PF05762 VWA domain containing CoxE-like protein GPY00_RS15485 PF00005 ABC transporter GPY00_RS15490 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY00_RS15495 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS15500 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS15505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS15505 PF03466 LysR substrate binding domain GPY00_RS15530 PF07690 Major Facilitator Superfamily GPY00_RS15535 PF00085 Thioredoxin GPY00_RS15540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GPY00_RS15540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GPY00_RS15545 PF02754 Cysteine-rich domain GPY00_RS15545 PF13183 4Fe-4S dicluster domain GPY00_RS15550 PF00890 FAD binding domain GPY00_RS15555 PF04324 BFD-like [2Fe-2S] binding domain GPY00_RS15555 PF01266 FAD dependent oxidoreductase GPY00_RS15560 PF00230 Major intrinsic protein GPY00_RS15565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GPY00_RS15565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GPY00_RS15580 PF04363 Protein of unknown function (DUF496) GPY00_RS15590 PF04337 Protein of unknown function, DUF480 GPY00_RS15595 PF01541 GIY-YIG catalytic domain GPY00_RS15605 PF13407 Periplasmic binding protein domain GPY00_RS15610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS15610 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS15610 PF09308 LuxQ, periplasmic GPY00_RS15610 PF00072 Response regulator receiver domain GPY00_RS15655 PF07685 CobB/CobQ-like glutamine amidotransferase domain GPY00_RS15655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GPY00_RS15665 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS15670 PF03459 TOBE domain GPY00_RS15670 PF00005 ABC transporter GPY00_RS15695 PF00072 Response regulator receiver domain GPY00_RS15695 PF13188 PAS domain GPY00_RS15695 PF08448 PAS fold GPY00_RS15695 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS15695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS15700 PF12805 FUSC-like inner membrane protein yccS GPY00_RS15705 PF13361 UvrD-like helicase C-terminal domain GPY00_RS15705 PF00580 UvrD/REP helicase N-terminal domain GPY00_RS15705 PF12462 DNA helicase IV / RNA helicase N terminal GPY00_RS15710 PF13006 Insertion element 4 transposase N-terminal GPY00_RS15710 PF01609 Transposase DDE domain GPY00_RS15725 PF01219 Prokaryotic diacylglycerol kinase GPY00_RS15730 PF00857 Isochorismatase family GPY00_RS15735 PF02142 MGS-like domain GPY00_RS15740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY00_RS15745 PF17149 Periplasmic sensor domain found in signal transduction proteins GPY00_RS15745 PF00672 HAMP domain GPY00_RS15745 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS15745 PF01627 Hpt domain GPY00_RS15745 PF00072 Response regulator receiver domain GPY00_RS15745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS15750 PF00224 Pyruvate kinase, barrel domain GPY00_RS15750 PF02887 Pyruvate kinase, alpha/beta domain GPY00_RS15755 PF07690 Major Facilitator Superfamily GPY00_RS15765 PF02743 Cache domain GPY00_RS15765 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS15765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS15770 PF00072 Response regulator receiver domain GPY00_RS15770 PF02954 Bacterial regulatory protein, Fis family GPY00_RS15770 PF14532 Sigma-54 interaction domain GPY00_RS15780 PF00465 Iron-containing alcohol dehydrogenase GPY00_RS15785 PF06483 Chitinase C GPY00_RS15785 PF00704 Glycosyl hydrolases family 18 GPY00_RS15790 PF00483 Nucleotidyl transferase GPY00_RS15795 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS15795 PF17158 Membrane-associated sensor, integral membrane domain GPY00_RS15810 PF02355 Protein export membrane protein GPY00_RS15810 PF07549 SecD/SecF GG Motif GPY00_RS15810 PF13721 SecD export protein N-terminal TM region GPY00_RS15815 PF02355 Protein export membrane protein GPY00_RS15815 PF07549 SecD/SecF GG Motif GPY00_RS15820 PF00106 short chain dehydrogenase GPY00_RS15825 PF00108 Thiolase, N-terminal domain GPY00_RS15825 PF02803 Thiolase, C-terminal domain GPY00_RS15835 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GPY00_RS15840 PF00005 ABC transporter GPY00_RS15840 PF08402 TOBE domain GPY00_RS15845 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS15855 PF07690 Major Facilitator Superfamily GPY00_RS15860 PF05231 MASE1 GPY00_RS15860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS15860 PF07730 Histidine kinase GPY00_RS15865 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS15865 PF00072 Response regulator receiver domain GPY00_RS15870 PF01966 HD domain GPY00_RS15880 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY00_RS15885 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GPY00_RS15890 PF01568 Molydopterin dinucleotide binding domain GPY00_RS15890 PF00384 Molybdopterin oxidoreductase GPY00_RS15890 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY00_RS15900 PF12838 4Fe-4S dicluster domain GPY00_RS15900 PF13187 4Fe-4S dicluster domain GPY00_RS15905 PF07730 Histidine kinase GPY00_RS15905 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GPY00_RS15905 PF00672 HAMP domain GPY00_RS15905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS15910 PF00072 Response regulator receiver domain GPY00_RS15910 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS15915 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS15930 PF00474 Sodium:solute symporter family GPY00_RS15935 PF03313 Serine dehydratase alpha chain GPY00_RS15935 PF03315 Serine dehydratase beta chain GPY00_RS15940 PF03606 C4-dicarboxylate anaerobic carrier GPY00_RS15945 PF12729 Four helix bundle sensory module for signal transduction GPY00_RS15945 PF00672 HAMP domain GPY00_RS15945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS15950 PF13419 Haloacid dehalogenase-like hydrolase GPY00_RS15955 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY00_RS15955 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY00_RS15960 PF00691 OmpA family GPY00_RS15960 PF13488 Glycine zipper GPY00_RS15965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS15965 PF17200 Single Cache domain 2 GPY00_RS15965 PF00672 HAMP domain GPY00_RS15970 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GPY00_RS15970 PF01266 FAD dependent oxidoreductase GPY00_RS15975 PF00294 pfkB family carbohydrate kinase GPY00_RS15980 PF00251 Glycosyl hydrolases family 32 N-terminal domain GPY00_RS15980 PF08244 Glycosyl hydrolases family 32 C terminal GPY00_RS15990 PF00367 phosphotransferase system, EIIB GPY00_RS15990 PF02378 Phosphotransferase system, EIIC GPY00_RS16035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY00_RS16035 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY00_RS16050 PF04143 Sulphur transport GPY00_RS16065 PF00873 AcrB/AcrD/AcrF family GPY00_RS16070 PF00881 Nitroreductase family GPY00_RS16075 PF03992 Antibiotic biosynthesis monooxygenase GPY00_RS16080 PF03466 LysR substrate binding domain GPY00_RS16080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS16090 PF06942 GlpM protein GPY00_RS16105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY00_RS16105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY00_RS16135 PF02780 Transketolase, C-terminal domain GPY00_RS16135 PF00456 Transketolase, thiamine diphosphate binding domain GPY00_RS16135 PF02779 Transketolase, pyrimidine binding domain GPY00_RS16140 PF00923 Transaldolase/Fructose-6-phosphate aldolase GPY00_RS16150 PF04198 Putative sugar-binding domain GPY00_RS16155 PF08329 Chitinase A, N-terminal domain GPY00_RS16155 PF00704 Glycosyl hydrolases family 18 GPY00_RS16160 PF00581 Rhodanese-like domain GPY00_RS16170 PF00899 ThiF family GPY00_RS16175 PF03454 MoeA C-terminal region (domain IV) GPY00_RS16175 PF00994 Probable molybdopterin binding domain GPY00_RS16175 PF03453 MoeA N-terminal region (domain I and II) GPY00_RS16180 PF01227 GTP cyclohydrolase I GPY00_RS16185 PF01625 Peptide methionine sulfoxide reductase GPY00_RS16185 PF01641 SelR domain GPY00_RS16190 PF01268 Formate--tetrahydrofolate ligase GPY00_RS16195 PF01741 Large-conductance mechanosensitive channel, MscL GPY00_RS16210 PF13419 Haloacid dehalogenase-like hydrolase GPY00_RS16215 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY00_RS16215 PF14760 Rnk N-terminus GPY00_RS16220 PF13419 Haloacid dehalogenase-like hydrolase GPY00_RS16240 PF00005 ABC transporter GPY00_RS16245 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS16250 PF07702 UTRA domain GPY00_RS16250 PF00392 Bacterial regulatory proteins, gntR family GPY00_RS16260 PF00854 POT family GPY00_RS16285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY00_RS16290 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS16295 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS16295 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY00_RS16300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY00_RS16300 PF00005 ABC transporter GPY00_RS16305 PF03479 Plants and Prokaryotes Conserved (PCC) domain GPY00_RS16305 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS16305 PF12804 MobA-like NTP transferase domain GPY00_RS16320 PF02798 Glutathione S-transferase, N-terminal domain GPY00_RS16320 PF00043 Glutathione S-transferase, C-terminal domain GPY00_RS16340 PF03061 Thioesterase superfamily GPY00_RS16350 PF12793 Sugar transport-related sRNA regulator N-term GPY00_RS16350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY00_RS16355 PF00593 TonB dependent receptor GPY00_RS16355 PF07715 TonB-dependent Receptor Plug Domain GPY00_RS16355 PF04886 PT repeat GPY00_RS16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS16360 PF03466 LysR substrate binding domain GPY00_RS16365 PF13380 CoA binding domain GPY00_RS16365 PF00583 Acetyltransferase (GNAT) family GPY00_RS16365 PF13607 Succinyl-CoA ligase like flavodoxin domain GPY00_RS16375 PF01820 D-ala D-ala ligase N-terminus GPY00_RS16375 PF07478 D-ala D-ala ligase C-terminus GPY00_RS16385 PF01253 Translation initiation factor SUI1 GPY00_RS16390 PF05707 Zonular occludens toxin (Zot) GPY00_RS16395 PF10734 Protein of unknown function (DUF2523) GPY00_RS16400 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII GPY00_RS16425 PF01376 Heat-labile enterotoxin beta chain GPY00_RS16430 PF01375 Heat-labile enterotoxin alpha chain GPY00_RS16435 PF05707 Zonular occludens toxin (Zot) GPY00_RS16440 PF10734 Protein of unknown function (DUF2523) GPY00_RS16445 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII GPY00_RS16470 PF03701 Uncharacterised protein family (UPF0181) GPY00_RS16485 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS16485 PF00072 Response regulator receiver domain GPY00_RS16495 PF02233 NAD(P) transhydrogenase beta subunit GPY00_RS16500 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GPY00_RS16500 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GPY00_RS16500 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GPY00_RS16515 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS16515 PF17158 Membrane-associated sensor, integral membrane domain GPY00_RS16535 PF17151 Periplasmic sensor domain GPY00_RS16535 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS16570 PF08274 PhnA Zinc-Ribbon GPY00_RS16570 PF03831 PhnA domain GPY00_RS16585 PF03741 Integral membrane protein TerC family GPY00_RS16590 PF02872 5'-nucleotidase, C-terminal domain GPY00_RS16590 PF00149 Calcineurin-like phosphoesterase GPY00_RS16595 PF11398 Protein of unknown function (DUF2813) GPY00_RS16600 PF06496 Protein of unknown function (DUF1097) GPY00_RS16605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS16605 PF03466 LysR substrate binding domain GPY00_RS16610 PF01226 Formate/nitrite transporter GPY00_RS16615 PF04264 YceI-like domain GPY00_RS16620 PF01292 Prokaryotic cytochrome b561 GPY00_RS16630 PF10388 EAL-domain associated signalling protein domain GPY00_RS16630 PF00563 EAL domain GPY00_RS16640 PF09335 SNARE associated Golgi protein GPY00_RS16645 PF02416 mttA/Hcf106 family GPY00_RS16650 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS16650 PF00072 Response regulator receiver domain GPY00_RS16655 PF13493 Domain of unknown function (DUF4118) GPY00_RS16655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS16655 PF02702 Osmosensitive K+ channel His kinase sensor domain GPY00_RS16655 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS16660 PF10371 Domain of unknown function GPY00_RS16660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY00_RS16660 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GPY00_RS16660 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GPY00_RS16660 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GPY00_RS16665 PF02705 K+ potassium transporter GPY00_RS16670 PF01926 50S ribosome-binding GTPase GPY00_RS16675 PF07683 Cobalamin synthesis protein cobW C-terminal domain GPY00_RS16675 PF02492 CobW/HypB/UreG, nucleotide-binding domain GPY00_RS16690 PF00155 Aminotransferase class I and II GPY00_RS16695 PF00072 Response regulator receiver domain GPY00_RS16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS16700 PF13476 AAA domain GPY00_RS16705 PF12320 Type 5 capsule protein repressor C-terminal domain GPY00_RS16705 PF00149 Calcineurin-like phosphoesterase GPY00_RS16710 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS16710 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY00_RS16720 PF00294 pfkB family carbohydrate kinase GPY00_RS16725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY00_RS16725 PF02378 Phosphotransferase system, EIIC GPY00_RS16730 PF08443 RimK-like ATP-grasp domain GPY00_RS16730 PF18030 RimK PreATP-grasp domain GPY00_RS16735 PF00155 Aminotransferase class I and II GPY00_RS16745 PF13597 Anaerobic ribonucleoside-triphosphate reductase GPY00_RS16745 PF03477 ATP cone domain GPY00_RS16780 PF00583 Acetyltransferase (GNAT) family GPY00_RS16840 PF00043 Glutathione S-transferase, C-terminal domain GPY00_RS16840 PF02798 Glutathione S-transferase, N-terminal domain GPY00_RS16870 PF12833 Helix-turn-helix domain GPY00_RS16870 PF01965 DJ-1/PfpI family GPY00_RS16880 PF13302 Acetyltransferase (GNAT) domain GPY00_RS16935 PF00583 Acetyltransferase (GNAT) family GPY00_RS16990 PF02567 Phenazine biosynthesis-like protein GPY00_RS16995 PF01636 Phosphotransferase enzyme family GPY00_RS17010 PF13302 Acetyltransferase (GNAT) domain GPY00_RS17040 PF01209 ubiE/COQ5 methyltransferase family GPY00_RS17065 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH GPY00_RS17130 PF13673 Acetyltransferase (GNAT) domain GPY00_RS17145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY00_RS17165 PF02567 Phenazine biosynthesis-like protein GPY00_RS17220 PF12464 Maltose acetyltransferase GPY00_RS17220 PF14602 Hexapeptide repeat of succinyl-transferase GPY00_RS17250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY00_RS17300 PF08212 Lipocalin-like domain GPY00_RS17330 PF12833 Helix-turn-helix domain GPY00_RS17330 PF01965 DJ-1/PfpI family GPY00_RS17370 PF05016 ParE toxin of type II toxin-antitoxin system, parDE GPY00_RS17390 PF00043 Glutathione S-transferase, C-terminal domain GPY00_RS17390 PF02798 Glutathione S-transferase, N-terminal domain GPY00_RS17405 PF02567 Phenazine biosynthesis-like protein GPY00_RS17410 PF01966 HD domain GPY00_RS17425 PF00453 Ribosomal protein L20 GPY00_RS17430 PF01632 Ribosomal protein L35 GPY00_RS17435 PF05198 Translation initiation factor IF-3, N-terminal domain GPY00_RS17435 PF00707 Translation initiation factor IF-3, C-terminal domain GPY00_RS17440 PF02824 TGS domain GPY00_RS17440 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY00_RS17440 PF03129 Anticodon binding domain GPY00_RS17440 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY00_RS17445 PF01571 Aminomethyltransferase folate-binding domain GPY00_RS17445 PF08669 Glycine cleavage T-protein C-terminal barrel domain GPY00_RS17455 PF00464 Serine hydroxymethyltransferase GPY00_RS17460 PF01597 Glycine cleavage H-protein GPY00_RS17465 PF02347 Glycine cleavage system P-protein GPY00_RS17470 PF01609 Transposase DDE domain GPY00_RS17470 PF13006 Insertion element 4 transposase N-terminal GPY00_RS17475 PF00194 Eukaryotic-type carbonic anhydrase GPY00_RS17490 PF00768 D-alanyl-D-alanine carboxypeptidase GPY00_RS17490 PF07943 Penicillin-binding protein 5, C-terminal domain GPY00_RS17500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS17500 PF00672 HAMP domain GPY00_RS17500 PF02743 Cache domain GPY00_RS17505 PF07690 Major Facilitator Superfamily GPY00_RS17535 PF00072 Response regulator receiver domain GPY00_RS17535 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS17550 PF00132 Bacterial transferase hexapeptide (six repeats) GPY00_RS17555 PF00128 Alpha amylase, catalytic domain GPY00_RS17570 PF00455 DeoR C terminal sensor domain GPY00_RS17570 PF08220 DeoR-like helix-turn-helix domain GPY00_RS17575 PF03611 PTS system sugar-specific permease component GPY00_RS17580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY00_RS17585 PF00596 Class II Aldolase and Adducin N-terminal domain GPY00_RS17595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GPY00_RS17600 PF01261 Xylose isomerase-like TIM barrel GPY00_RS17610 PF00072 Response regulator receiver domain GPY00_RS17610 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS17615 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS17615 PF00672 HAMP domain GPY00_RS17635 PF00871 Acetokinase family GPY00_RS17645 PF00593 TonB dependent receptor GPY00_RS17645 PF07715 TonB-dependent Receptor Plug Domain GPY00_RS17650 PF12833 Helix-turn-helix domain GPY00_RS17655 PF00005 ABC transporter GPY00_RS17660 PF01032 FecCD transport family GPY00_RS17665 PF01032 FecCD transport family GPY00_RS17685 PF05547 Immune inhibitor A peptidase M6 GPY00_RS17685 PF00801 PKD domain GPY00_RS17690 PF03280 Proteobacterial lipase chaperone protein GPY00_RS17695 PF00561 alpha/beta hydrolase fold GPY00_RS17700 PF12729 Four helix bundle sensory module for signal transduction GPY00_RS17700 PF00672 HAMP domain GPY00_RS17700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS17710 PF13737 Transposase DDE domain GPY00_RS17720 PF00657 GDSL-like Lipase/Acylhydrolase GPY00_RS17725 PF08448 PAS fold GPY00_RS17725 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS17735 PF07690 Major Facilitator Superfamily GPY00_RS17740 PF03553 Na+/H+ antiporter family GPY00_RS17750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS17750 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY00_RS17750 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS17755 PF11849 Domain of unknown function (DUF3369) GPY00_RS17760 PF01467 Cytidylyltransferase-like GPY00_RS17765 PF02540 NAD synthase GPY00_RS17770 PF03605 Anaerobic c4-dicarboxylate membrane transporter GPY00_RS17775 PF00270 DEAD/DEAH box helicase GPY00_RS17775 PF00271 Helicase conserved C-terminal domain GPY00_RS17965 PF00005 ABC transporter GPY00_RS18075 PF00589 Phage integrase family GPY00_RS18075 PF02899 Phage integrase, N-terminal SAM-like domain GPY00_RS18085 PF00478 IMP dehydrogenase / GMP reductase domain GPY00_RS18095 PF07885 Ion channel GPY00_RS18105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY00_RS18105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY00_RS18110 PF03853 YjeF-related protein N-terminus GPY00_RS18110 PF01256 Carbohydrate kinase GPY00_RS18120 PF00072 Response regulator receiver domain GPY00_RS18135 PF03889 Alternative ribosome-rescue factor A GPY00_RS18140 PF00313 'Cold-shock' DNA-binding domain GPY00_RS18145 PF00042 Globin GPY00_RS18145 PF00175 Oxidoreductase NAD-binding domain GPY00_RS18145 PF00970 Oxidoreductase FAD-binding domain GPY00_RS18150 PF01590 GAF domain GPY00_RS18150 PF00158 Sigma-54 interaction domain GPY00_RS18160 PF01546 Peptidase family M20/M25/M40 GPY00_RS18160 PF07687 Peptidase dimerisation domain GPY00_RS18165 PF07670 Nucleoside recognition GPY00_RS18165 PF07662 Na+ dependent nucleoside transporter C-terminus GPY00_RS18165 PF01773 Na+ dependent nucleoside transporter N-terminus GPY00_RS18180 PF02743 Cache domain GPY00_RS18180 PF00672 HAMP domain GPY00_RS18180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS18185 PF07726 ATPase family associated with various cellular activities (AAA) GPY00_RS18185 PF17863 AAA lid domain GPY00_RS18190 PF01882 Protein of unknown function DUF58 GPY00_RS18220 PF00313 'Cold-shock' DNA-binding domain GPY00_RS18225 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS18225 PF00563 EAL domain GPY00_RS18225 PF08448 PAS fold GPY00_RS18235 PF12843 Putative quorum-sensing-regulated virulence factor GPY00_RS18245 PF01212 Beta-eliminating lyase GPY00_RS18260 PF00582 Universal stress protein family GPY00_RS18270 PF00361 Proton-conducting membrane transporter GPY00_RS18270 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GPY00_RS18270 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GPY00_RS18270 PF13244 Domain of unknown function (DUF4040) GPY00_RS18290 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GPY00_RS18295 PF03334 Na+/H+ antiporter subunit GPY00_RS18300 PF00175 Oxidoreductase NAD-binding domain GPY00_RS18300 PF00042 Globin GPY00_RS18300 PF00970 Oxidoreductase FAD-binding domain GPY00_RS18305 PF01327 Polypeptide deformylase GPY00_RS18310 PF12561 ToxR activated gene A lipoprotein domain GPY00_RS18310 PF00041 Fibronectin type III domain GPY00_RS18315 PF01266 FAD dependent oxidoreductase GPY00_RS18330 PF00158 Sigma-54 interaction domain GPY00_RS18330 PF00072 Response regulator receiver domain GPY00_RS18330 PF02954 Bacterial regulatory protein, Fis family GPY00_RS18335 PF02743 Cache domain GPY00_RS18335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS18335 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS18350 PF07690 Major Facilitator Superfamily GPY00_RS18355 PF03009 Glycerophosphoryl diester phosphodiesterase family GPY00_RS18365 PF01048 Phosphorylase superfamily GPY00_RS18370 PF04973 Nicotinamide mononucleotide transporter GPY00_RS18375 PF00356 Bacterial regulatory proteins, lacI family GPY00_RS18380 PF00294 pfkB family carbohydrate kinase GPY00_RS18385 PF13407 Periplasmic binding protein domain GPY00_RS18390 PF02653 Branched-chain amino acid transport system / permease component GPY00_RS18395 PF00005 ABC transporter GPY00_RS18400 PF05025 RbsD / FucU transport protein family GPY00_RS18420 PF04717 Type VI secretion system, phage-baseplate injector GPY00_RS18420 PF16671 Actin cross-linking domain GPY00_RS18455 PF07724 AAA domain (Cdc48 subfamily) GPY00_RS18455 PF00004 ATPase family associated with various cellular activities (AAA) GPY00_RS18455 PF17871 AAA lid domain GPY00_RS18455 PF10431 C-terminal, D2-small domain, of ClpB protein GPY00_RS18465 PF13006 Insertion element 4 transposase N-terminal GPY00_RS18465 PF01609 Transposase DDE domain GPY00_RS18520 PF00849 RNA pseudouridylate synthase GPY00_RS18525 PF01740 STAS domain GPY00_RS18525 PF00916 Sulfate permease family GPY00_RS18530 PF13419 Haloacid dehalogenase-like hydrolase GPY00_RS18535 PF00563 EAL domain GPY00_RS18535 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS18540 PF00581 Rhodanese-like domain GPY00_RS18545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GPY00_RS18545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY00_RS18550 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GPY00_RS18550 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GPY00_RS18560 PF01447 Thermolysin metallopeptidase, catalytic domain GPY00_RS18560 PF01483 Proprotein convertase P-domain GPY00_RS18560 PF02868 Thermolysin metallopeptidase, alpha-helical domain GPY00_RS18560 PF07504 Fungalysin/Thermolysin Propeptide Motif GPY00_RS18580 PF02001 Protein of unknown function DUF134 GPY00_RS18590 PF00375 Sodium:dicarboxylate symporter family GPY00_RS18610 PF00376 MerR family regulatory protein GPY00_RS18610 PF09278 MerR, DNA binding GPY00_RS18615 PF07690 Major Facilitator Superfamily GPY00_RS18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY00_RS18620 PF03466 LysR substrate binding domain GPY00_RS18625 PF13188 PAS domain GPY00_RS18625 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS18625 PF00563 EAL domain GPY00_RS18625 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS18630 PF01476 LysM domain GPY00_RS18630 PF08525 Opacity-associated protein A N-terminal motif GPY00_RS18630 PF01551 Peptidase family M23 GPY00_RS18640 PF01740 STAS domain GPY00_RS18640 PF00916 Sulfate permease family GPY00_RS18655 PF03707 Bacterial signalling protein N terminal repeat GPY00_RS18655 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS18655 PF00563 EAL domain GPY00_RS18660 PF00005 ABC transporter GPY00_RS18665 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS18670 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS18675 PF12849 PBP superfamily domain GPY00_RS18680 PF12729 Four helix bundle sensory module for signal transduction GPY00_RS18680 PF00672 HAMP domain GPY00_RS18680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS18700 PF00593 TonB dependent receptor GPY00_RS18700 PF07715 TonB-dependent Receptor Plug Domain GPY00_RS18705 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GPY00_RS18705 PF00326 Prolyl oligopeptidase family GPY00_RS18710 PF00271 Helicase conserved C-terminal domain GPY00_RS18710 PF00270 DEAD/DEAH box helicase GPY00_RS18720 PF01476 LysM domain GPY00_RS18720 PF17969 L,D-transpeptidase C-terminal domain GPY00_RS18720 PF03734 L,D-transpeptidase catalytic domain GPY00_RS18725 PF00875 DNA photolyase GPY00_RS18725 PF03441 FAD binding domain of DNA photolyase GPY00_RS18730 PF13411 MerR HTH family regulatory protein GPY00_RS18735 PF08349 Protein of unknown function (DUF1722) GPY00_RS18740 PF01048 Phosphorylase superfamily GPY00_RS18755 PF00990 Diguanylate cyclase, GGDEF domain GPY00_RS18770 PF07238 PilZ domain GPY00_RS18770 PF12945 Flagellar protein YcgR GPY00_RS18775 PF03616 Sodium/glutamate symporter GPY00_RS18790 PF02630 SCO1/SenC GPY00_RS18800 PF00375 Sodium:dicarboxylate symporter family GPY00_RS18805 PF01569 PAP2 superfamily GPY00_RS18825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS18825 PF00672 HAMP domain GPY00_RS18825 PF02743 Cache domain GPY00_RS18845 PF00704 Glycosyl hydrolases family 18 GPY00_RS18845 PF08329 Chitinase A, N-terminal domain GPY00_RS18850 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GPY00_RS18855 PF01609 Transposase DDE domain GPY00_RS18855 PF13006 Insertion element 4 transposase N-terminal GPY00_RS18860 PF00939 Sodium:sulfate symporter transmembrane region GPY00_RS18870 PF00842 Alanine racemase, C-terminal domain GPY00_RS18870 PF01757 Acyltransferase family GPY00_RS18870 PF01168 Alanine racemase, N-terminal domain GPY00_RS18875 PF14706 Transposase DNA-binding GPY00_RS18875 PF01609 Transposase DDE domain GPY00_RS18875 PF02281 Transposase Tn5 dimerisation domain GPY00_RS18900 PF16671 Actin cross-linking domain GPY00_RS18900 PF04717 Type VI secretion system, phage-baseplate injector GPY00_RS18905 PF05638 Type VI secretion system effector, Hcp GPY00_RS18910 PF00128 Alpha amylase, catalytic domain GPY00_RS18910 PF02806 Alpha amylase, C-terminal all-beta domain GPY00_RS18910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY00_RS18915 PF02446 4-alpha-glucanotransferase GPY00_RS18920 PF00343 Carbohydrate phosphorylase GPY00_RS18925 PF17874 MalT-like TPR region GPY00_RS18925 PF00196 Bacterial regulatory proteins, luxR family GPY00_RS18930 PF10928 Protein of unknown function (DUF2810) GPY00_RS18940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS18940 PF00672 HAMP domain GPY00_RS18940 PF17200 Single Cache domain 2 GPY00_RS18945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY00_RS18945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GPY00_RS18950 PF01709 Transcriptional regulator GPY00_RS18975 PF18607 ParA helix turn helix domain GPY00_RS18975 PF13614 AAA domain GPY00_RS18980 PF02195 ParB-like nuclease domain GPY00_RS18980 PF08775 ParB family GPY00_RS18985 PF13416 Bacterial extracellular solute-binding protein GPY00_RS18990 PF13718 GNAT acetyltransferase 2 GPY00_RS18990 PF05127 Helicase GPY00_RS19000 PF00501 AMP-binding enzyme GPY00_RS19020 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS19020 PF00072 Response regulator receiver domain GPY00_RS19025 PF00512 His Kinase A (phospho-acceptor) domain GPY00_RS19025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS19025 PF08521 Two-component sensor kinase N-terminal GPY00_RS19030 PF08019 Phosphoethanolamine transferase EptA/EptB GPY00_RS19030 PF00884 Sulfatase GPY00_RS19035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY00_RS19035 PF00005 ABC transporter GPY00_RS19040 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY00_RS19040 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS19045 PF00528 Binding-protein-dependent transport system inner membrane component GPY00_RS19050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY00_RS19060 PF00072 Response regulator receiver domain GPY00_RS19065 PF09078 CheY binding GPY00_RS19065 PF02895 Signal transducing histidine kinase, homodimeric domain GPY00_RS19065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY00_RS19065 PF01627 Hpt domain GPY00_RS19065 PF01584 CheW-like domain GPY00_RS19070 PF01584 CheW-like domain GPY00_RS19075 PF01584 CheW-like domain GPY00_RS19080 PF02203 Tar ligand binding domain homologue GPY00_RS19080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS19080 PF00672 HAMP domain GPY00_RS19085 PF03705 CheR methyltransferase, all-alpha domain GPY00_RS19085 PF01739 CheR methyltransferase, SAM binding domain GPY00_RS19090 PF03975 CheD chemotactic sensory transduction GPY00_RS19095 PF00072 Response regulator receiver domain GPY00_RS19095 PF01339 CheB methylesterase GPY00_RS19100 PF00672 HAMP domain GPY00_RS19100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY00_RS19100 PF02743 Cache domain GPY00_RS19110 PF00072 Response regulator receiver domain GPY00_RS19110 PF00486 Transcriptional regulatory protein, C terminal GPY00_RS19120 PF03412 Peptidase C39 family GPY00_RS19120 PF00005 ABC transporter GPY00_RS19120 PF00664 ABC transporter transmembrane region GPY00_RS19135 PF00529 HlyD membrane-fusion protein of T1SS GPY00_RS19140 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GPY00_RS19140 PF01243 Pyridoxamine 5'-phosphate oxidase GPY00_RS19145 PF00072 Response regulator receiver domain GPY00_RS19145 PF00196 Bacterial regulatory proteins, luxR family