locus-tag class description GPY04_RS00010 PF00795 Carbon-nitrogen hydrolase GPY04_RS00015 PF01523 Putative modulator of DNA gyrase GPY04_RS00025 PF06877 Regulator of ribonuclease activity B GPY04_RS00040 PF00582 Universal stress protein family GPY04_RS00050 PF16868 NMT1-like family GPY04_RS00055 PF01316 Arginine repressor, DNA binding domain GPY04_RS00055 PF02863 Arginine repressor, C-terminal domain GPY04_RS00060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GPY04_RS00060 PF00056 lactate/malate dehydrogenase, NAD binding domain GPY04_RS00065 PF13520 Amino acid permease GPY04_RS00070 PF00348 Polyprenyl synthetase GPY04_RS00075 PF00829 Ribosomal prokaryotic L21 protein GPY04_RS00080 PF01016 Ribosomal L27 protein GPY04_RS00085 PF01926 50S ribosome-binding GTPase GPY04_RS00085 PF01018 GTP1/OBG GPY04_RS00090 PF06738 Putative threonine/serine exporter GPY04_RS00095 PF12821 Threonine/Serine exporter, ThrE GPY04_RS00100 PF00186 Dihydrofolate reductase GPY04_RS00105 PF00149 Calcineurin-like phosphoesterase GPY04_RS00110 PF04379 ApaG domain GPY04_RS00115 PF00398 Ribosomal RNA adenine dimethylase GPY04_RS00120 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GPY04_RS00125 PF09312 SurA N-terminal domain GPY04_RS00130 PF04453 LPS transport system D GPY04_RS00130 PF03968 OstA-like protein GPY04_RS00135 PF00226 DnaJ domain GPY04_RS00135 PF05099 Tellurite resistance protein TerB GPY04_RS00165 PF12729 Four helix bundle sensory module for signal transduction GPY04_RS00165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS00165 PF00672 HAMP domain GPY04_RS00190 PF01464 Transglycosylase SLT domain GPY04_RS00190 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain GPY04_RS00195 PF04362 Bacterial Fe(2+) trafficking GPY04_RS00200 PF14815 NUDIX domain GPY04_RS00200 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY04_RS00200 PF10576 Iron-sulfur binding domain of endonuclease III GPY04_RS00200 PF00633 Helix-hairpin-helix motif GPY04_RS00205 PF02390 Putative methyltransferase GPY04_RS00210 PF04960 Glutaminase GPY04_RS00215 PF04055 Radical SAM superfamily GPY04_RS00215 PF06969 HemN C-terminal domain GPY04_RS00220 PF01725 Ham1 family GPY04_RS00230 PF02594 Uncharacterised ACR, YggU family COG1872 GPY04_RS00235 PF02325 YGGT family GPY04_RS00240 PF14748 Pyrroline-5-carboxylate reductase dimerisation GPY04_RS00240 PF03807 NADP oxidoreductase coenzyme F420-dependent GPY04_RS00245 PF01168 Alanine racemase, N-terminal domain GPY04_RS00250 PF00437 Type II/IV secretion system protein GPY04_RS00255 PF00437 Type II/IV secretion system protein GPY04_RS00265 PF01479 S4 domain GPY04_RS00265 PF00579 tRNA synthetases class I (W and Y) GPY04_RS00270 PF03652 Holliday junction resolvase GPY04_RS00275 PF02622 Uncharacterized ACR, COG1678 GPY04_RS00280 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GPY04_RS00280 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GPY04_RS00285 PF04452 RNA methyltransferase GPY04_RS00290 PF04231 Endonuclease I GPY04_RS00295 PF17283 SprT-like zinc ribbon domain GPY04_RS00295 PF10263 SprT-like family GPY04_RS00300 PF00438 S-adenosylmethionine synthetase, N-terminal domain GPY04_RS00300 PF02773 S-adenosylmethionine synthetase, C-terminal domain GPY04_RS00300 PF02772 S-adenosylmethionine synthetase, central domain GPY04_RS00305 PF02779 Transketolase, pyrimidine binding domain GPY04_RS00305 PF02780 Transketolase, C-terminal domain GPY04_RS00305 PF00456 Transketolase, thiamine diphosphate binding domain GPY04_RS00310 PF03466 LysR substrate binding domain GPY04_RS00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS00315 PF00593 TonB dependent receptor GPY04_RS00315 PF07715 TonB-dependent Receptor Plug Domain GPY04_RS00320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY04_RS00320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY04_RS00325 PF00162 Phosphoglycerate kinase GPY04_RS00330 PF01116 Fructose-bisphosphate aldolase class-II GPY04_RS00340 PF05552 Conserved TM helix GPY04_RS00340 PF00924 Mechanosensitive ion channel GPY04_RS00345 PF01810 LysE type translocator GPY04_RS00350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS00350 PF03466 LysR substrate binding domain GPY04_RS00355 PF04402 Protein of unknown function (DUF541) GPY04_RS00360 PF02887 Pyruvate kinase, alpha/beta domain GPY04_RS00360 PF00224 Pyruvate kinase, barrel domain GPY04_RS00365 PF00455 DeoR C terminal sensor domain GPY04_RS00365 PF08220 DeoR-like helix-turn-helix domain GPY04_RS00370 PF01380 SIS domain GPY04_RS00375 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY04_RS00430 PF00075 RNase H GPY04_RS00445 PF00114 Pilin (bacterial filament) GPY04_RS00445 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS00455 PF01551 Peptidase family M23 GPY04_RS00455 PF08525 Opacity-associated protein A N-terminal motif GPY04_RS00455 PF01476 LysM domain GPY04_RS00490 PF04002 RadC-like JAB domain GPY04_RS00515 PF13356 Arm DNA-binding domain GPY04_RS00515 PF00589 Phage integrase family GPY04_RS00525 PF00140 Sigma-70 factor, region 1.2 GPY04_RS00525 PF04542 Sigma-70 region 2 GPY04_RS00525 PF03979 Sigma-70 factor, region 1.1 GPY04_RS00525 PF04539 Sigma-70 region 3 GPY04_RS00525 PF04546 Sigma-70, non-essential region GPY04_RS00525 PF04545 Sigma-70, region 4 GPY04_RS00530 PF08275 DNA primase catalytic core, N-terminal domain GPY04_RS00530 PF10410 DnaB-helicase binding domain of primase GPY04_RS00530 PF08278 DNA primase DnaG DnaB-binding GPY04_RS00530 PF01807 CHC2 zinc finger GPY04_RS00535 PF09424 Yqey-like protein GPY04_RS00540 PF01165 Ribosomal protein S21 GPY04_RS00545 PF00814 Glycoprotease family GPY04_RS00550 PF00561 alpha/beta hydrolase fold GPY04_RS00555 PF02660 Glycerol-3-phosphate acyltransferase GPY04_RS00560 PF02152 Dihydroneopterin aldolase GPY04_RS00565 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GPY04_RS00570 PF02673 Bacitracin resistance protein BacA GPY04_RS00575 PF04977 Septum formation initiator GPY04_RS00580 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GPY04_RS00585 PF02542 YgbB family GPY04_RS00590 PF01142 tRNA pseudouridine synthase D (TruD) GPY04_RS00595 PF01975 Survival protein SurE GPY04_RS00605 PF01476 LysM domain GPY04_RS00605 PF01551 Peptidase family M23 GPY04_RS00610 PF04545 Sigma-70, region 4 GPY04_RS00610 PF04539 Sigma-70 region 3 GPY04_RS00610 PF00140 Sigma-70 factor, region 1.2 GPY04_RS00610 PF04542 Sigma-70 region 2 GPY04_RS00615 PF05188 MutS domain II GPY04_RS00615 PF01624 MutS domain I GPY04_RS00615 PF05190 MutS family domain IV GPY04_RS00615 PF05192 MutS domain III GPY04_RS00615 PF00488 MutS domain V GPY04_RS00620 PF00291 Pyridoxal-phosphate dependent enzyme GPY04_RS00630 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS00640 PF12857 TOBE-like domain GPY04_RS00640 PF00005 ABC transporter GPY04_RS00645 PF02464 Competence-damaged protein GPY04_RS00650 PF00154 recA bacterial DNA recombination protein GPY04_RS00655 PF02631 RecX family GPY04_RS00660 PF02272 DHHA1 domain GPY04_RS00660 PF01411 tRNA synthetases class II (A) GPY04_RS00660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY04_RS00665 PF01842 ACT domain GPY04_RS00665 PF00696 Amino acid kinase family GPY04_RS00665 PF13840 ACT domain GPY04_RS00670 PF02599 Global regulator protein family GPY04_RS00715 PF04277 Oxaloacetate decarboxylase, gamma chain GPY04_RS00720 PF00364 Biotin-requiring enzyme GPY04_RS00720 PF00682 HMGL-like GPY04_RS00720 PF02436 Conserved carboxylase domain GPY04_RS00725 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GPY04_RS00735 PF09335 SNARE associated Golgi protein GPY04_RS00740 PF05193 Peptidase M16 inactive domain GPY04_RS00740 PF00675 Insulinase (Peptidase family M16) GPY04_RS00745 PF04262 Glutamate-cysteine ligase GPY04_RS00750 PF02664 S-Ribosylhomocysteinase (LuxS) GPY04_RS00755 PF00571 CBS domain GPY04_RS00755 PF03471 Transporter associated domain GPY04_RS00755 PF01595 Cyclin M transmembrane N-terminal domain GPY04_RS00760 PF01578 Cytochrome C assembly protein GPY04_RS00765 PF00448 SRP54-type protein, GTPase domain GPY04_RS00765 PF02881 SRP54-type protein, helical bundle domain GPY04_RS00765 PF02978 Signal peptide binding domain GPY04_RS00770 PF00886 Ribosomal protein S16 GPY04_RS00775 PF05239 PRC-barrel domain GPY04_RS00775 PF01782 RimM N-terminal domain GPY04_RS00780 PF01746 tRNA (Guanine-1)-methyltransferase GPY04_RS00785 PF01245 Ribosomal protein L19 GPY04_RS00790 PF13180 PDZ domain GPY04_RS00795 PF00595 PDZ domain GPY04_RS00805 PF03969 AFG1-like ATPase GPY04_RS00810 PF00572 Ribosomal protein L13 GPY04_RS00815 PF00380 Ribosomal protein S9/S16 GPY04_RS00820 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GPY04_RS00820 PF00355 Rieske [2Fe-2S] domain GPY04_RS00825 PF00033 Cytochrome b/b6/petB GPY04_RS00825 PF00032 Cytochrome b(C-terminal)/b6/petD GPY04_RS00830 PF02167 Cytochrome C1 family GPY04_RS00835 PF00043 Glutathione S-transferase, C-terminal domain GPY04_RS00835 PF02798 Glutathione S-transferase, N-terminal domain GPY04_RS00840 PF04386 Stringent starvation protein B GPY04_RS00845 PF04972 BON domain GPY04_RS00850 PF13580 SIS domain GPY04_RS00855 PF02021 Uncharacterised protein family UPF0102 GPY04_RS00860 PF04348 LppC putative lipoprotein GPY04_RS00865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY04_RS00870 PF00440 Bacterial regulatory proteins, tetR family GPY04_RS00875 PF00156 Phosphoribosyl transferase domain GPY04_RS00880 PF00484 Carbonic anhydrase GPY04_RS00885 PF00916 Sulfate permease family GPY04_RS00885 PF01740 STAS domain GPY04_RS00890 PF00005 ABC transporter GPY04_RS00895 PF01061 ABC-2 type transporter GPY04_RS00900 PF02569 Pantoate-beta-alanine ligase GPY04_RS00905 PF02548 Ketopantoate hydroxymethyltransferase GPY04_RS00910 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GPY04_RS00915 PF01743 Poly A polymerase head domain GPY04_RS00915 PF12626 Polymerase A arginine-rich C-terminus GPY04_RS00915 PF12627 Probable RNA and SrmB- binding site of polymerase A GPY04_RS00920 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY04_RS00925 PF01258 Prokaryotic dksA/traR C4-type zinc finger GPY04_RS00930 PF03749 Sugar fermentation stimulation protein RE domain GPY04_RS00930 PF17746 SfsA N-terminal OB domain GPY04_RS00940 PF00270 DEAD/DEAH box helicase GPY04_RS00940 PF04408 Helicase associated domain (HA2) GPY04_RS00940 PF00271 Helicase conserved C-terminal domain GPY04_RS00940 PF08482 ATP-dependent helicase C-terminal GPY04_RS00945 PF00905 Penicillin binding protein transpeptidase domain GPY04_RS00945 PF14814 Bifunctional transglycosylase second domain GPY04_RS00945 PF00912 Transglycosylase GPY04_RS00950 PF01734 Patatin-like phospholipase GPY04_RS00955 PF11791 Aconitate B N-terminal domain GPY04_RS00955 PF06434 Aconitate hydratase 2 N-terminus GPY04_RS00955 PF00330 Aconitase family (aconitate hydratase) GPY04_RS00960 PF06062 Uncharacterised protein family (UPF0231) GPY04_RS00965 PF00543 Nitrogen regulatory protein P-II GPY04_RS00970 PF00909 Ammonium Transporter Family GPY04_RS00975 PF13416 Bacterial extracellular solute-binding protein GPY04_RS00985 PF08402 TOBE domain GPY04_RS00985 PF00005 ABC transporter GPY04_RS00990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY04_RS00990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY04_RS00990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY04_RS00990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY04_RS00995 PF06165 Glycosyltransferase family 36 GPY04_RS00995 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain GPY04_RS01000 PF02838 Glycosyl hydrolase family 20, domain 2 GPY04_RS01000 PF00728 Glycosyl hydrolase family 20, catalytic domain GPY04_RS01005 PF01869 BadF/BadG/BcrA/BcrD ATPase family GPY04_RS01015 PF00005 ABC transporter GPY04_RS01015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY04_RS01020 PF00005 ABC transporter GPY04_RS01020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY04_RS01025 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY04_RS01025 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS01030 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS01035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY04_RS01040 PF00072 Response regulator receiver domain GPY04_RS01040 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS01040 PF09308 LuxQ, periplasmic GPY04_RS01040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS01045 PF08468 Methyltransferase small domain N-terminal GPY04_RS01045 PF05175 Methyltransferase small domain GPY04_RS01050 PF01594 AI-2E family transporter GPY04_RS01060 PF00202 Aminotransferase class-III GPY04_RS01065 PF01521 Iron-sulphur cluster biosynthesis GPY04_RS01075 PF00873 AcrB/AcrD/AcrF family GPY04_RS01080 PF04225 Opacity-associated protein A LysM-like domain GPY04_RS01080 PF01551 Peptidase family M23 GPY04_RS01085 PF01479 S4 domain GPY04_RS01085 PF00579 tRNA synthetases class I (W and Y) GPY04_RS01090 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GPY04_RS01095 PF13609 Gram-negative porin GPY04_RS01100 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY04_RS01100 PF03449 Transcription elongation factor, N-terminal GPY04_RS01105 PF01985 CRS1 / YhbY (CRM) domain GPY04_RS01110 PF01728 FtsJ-like methyltransferase GPY04_RS01115 PF06480 FtsH Extracellular GPY04_RS01115 PF01434 Peptidase family M41 GPY04_RS01115 PF17862 AAA+ lid domain GPY04_RS01115 PF00004 ATPase family associated with various cellular activities (AAA) GPY04_RS01120 PF00809 Pterin binding enzyme GPY04_RS01125 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY04_RS01125 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY04_RS01125 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY04_RS01125 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY04_RS01130 PF03840 Preprotein translocase SecG subunit GPY04_RS01145 PF02576 RimP N-terminal domain GPY04_RS01145 PF17384 RimP C-terminal SH3 domain GPY04_RS01150 PF13184 NusA-like KH domain GPY04_RS01150 PF08529 NusA N-terminal domain GPY04_RS01150 PF00575 S1 RNA binding domain GPY04_RS01155 PF00009 Elongation factor Tu GTP binding domain GPY04_RS01155 PF11987 Translation-initiation factor 2 GPY04_RS01155 PF08364 Bacterial translation initiation factor IF-2 associated region GPY04_RS01155 PF04760 Translation initiation factor IF-2, N-terminal region GPY04_RS01160 PF02033 Ribosome-binding factor A GPY04_RS01165 PF01509 TruB family pseudouridylate synthase (N terminal domain) GPY04_RS01165 PF16198 tRNA pseudouridylate synthase B C-terminal domain GPY04_RS01165 PF09157 Pseudouridine synthase II TruB, C-terminal GPY04_RS01170 PF00312 Ribosomal protein S15 GPY04_RS01175 PF03725 3' exoribonuclease family, domain 2 GPY04_RS01175 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GPY04_RS01175 PF00575 S1 RNA binding domain GPY04_RS01175 PF00013 KH domain GPY04_RS01175 PF01138 3' exoribonuclease family, domain 1 GPY04_RS01180 PF13181 Tetratricopeptide repeat GPY04_RS01180 PF07719 Tetratricopeptide repeat GPY04_RS01205 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS01205 PF00563 EAL domain GPY04_RS01205 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS01215 PF13508 Acetyltransferase (GNAT) domain GPY04_RS01230 PF00563 EAL domain GPY04_RS01230 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS01230 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS01235 PF03144 Elongation factor Tu domain 2 GPY04_RS01235 PF00009 Elongation factor Tu GTP binding domain GPY04_RS01235 PF16658 Class II release factor RF3, C-terminal domain GPY04_RS01240 PF00270 DEAD/DEAH box helicase GPY04_RS01240 PF00271 Helicase conserved C-terminal domain GPY04_RS01245 PF05175 Methyltransferase small domain GPY04_RS01250 PF05525 Branched-chain amino acid transport protein GPY04_RS01260 PF00152 tRNA synthetases class II (D, K and N) GPY04_RS01260 PF01336 OB-fold nucleic acid binding domain GPY04_RS01265 PF02954 Bacterial regulatory protein, Fis family GPY04_RS01265 PF00072 Response regulator receiver domain GPY04_RS01265 PF00158 Sigma-54 interaction domain GPY04_RS01280 PF00248 Aldo/keto reductase family GPY04_RS01285 PF02976 DNA mismatch repair enzyme MutH GPY04_RS01290 PF00293 NUDIX domain GPY04_RS01295 PF05524 PEP-utilising enzyme, N-terminal GPY04_RS01295 PF01590 GAF domain GPY04_RS01295 PF00391 PEP-utilising enzyme, mobile domain GPY04_RS01295 PF02896 PEP-utilising enzyme, TIM barrel domain GPY04_RS01300 PF01925 Sulfite exporter TauE/SafE GPY04_RS01305 PF01790 Prolipoprotein diacylglyceryl transferase GPY04_RS01310 PF00303 Thymidylate synthase GPY04_RS01315 PF02690 Na+/Pi-cotransporter GPY04_RS01320 PF03466 LysR substrate binding domain GPY04_RS01320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS01325 PF01022 Bacterial regulatory protein, arsR family GPY04_RS01330 PF01649 Ribosomal protein S20 GPY04_RS01335 PF03023 Lipid II flippase MurJ GPY04_RS01340 PF06574 FAD synthetase GPY04_RS01340 PF01687 Riboflavin kinase GPY04_RS01345 PF06827 Zinc finger found in FPG and IleRS GPY04_RS01345 PF00133 tRNA synthetases class I (I, L, M and V) GPY04_RS01345 PF08264 Anticodon-binding domain of tRNA GPY04_RS01350 PF01252 Signal peptidase (SPase) II GPY04_RS01355 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY04_RS01360 PF02401 LytB protein GPY04_RS01365 PF02554 Carbon starvation protein CstA GPY04_RS01380 PF13580 SIS domain GPY04_RS01385 PF03702 Anhydro-N-acetylmuramic acid kinase GPY04_RS01390 PF00933 Glycosyl hydrolase family 3 N terminal domain GPY04_RS01395 PF00072 Response regulator receiver domain GPY04_RS01395 PF04397 LytTr DNA-binding domain GPY04_RS01400 PF06580 Histidine kinase GPY04_RS01400 PF07694 5TMR of 5TMR-LYT GPY04_RS01405 PF00793 DAHP synthetase I family GPY04_RS01410 PF01817 Chorismate mutase type II GPY04_RS01410 PF02153 Prephenate dehydrogenase GPY04_RS01415 PF07238 PilZ domain GPY04_RS01420 PF12848 ABC transporter GPY04_RS01420 PF00005 ABC transporter GPY04_RS01425 PF01464 Transglycosylase SLT domain GPY04_RS01425 PF14718 Soluble lytic murein transglycosylase L domain GPY04_RS01430 PF01371 Trp repressor protein GPY04_RS01435 PF01931 Protein of unknown function DUF84 GPY04_RS01440 PF00563 EAL domain GPY04_RS01440 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS01445 PF13416 Bacterial extracellular solute-binding protein GPY04_RS01450 PF01817 Chorismate mutase type II GPY04_RS01450 PF00800 Prephenate dehydratase GPY04_RS01455 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GPY04_RS01460 PF13525 Outer membrane lipoprotein GPY04_RS01465 PF00849 RNA pseudouridylate synthase GPY04_RS01465 PF01479 S4 domain GPY04_RS01475 PF00004 ATPase family associated with various cellular activities (AAA) GPY04_RS01475 PF07724 AAA domain (Cdc48 subfamily) GPY04_RS01475 PF17871 AAA lid domain GPY04_RS01475 PF02861 Clp amino terminal domain, pathogenicity island component GPY04_RS01475 PF10431 C-terminal, D2-small domain, of ClpB protein GPY04_RS01510 PF00881 Nitroreductase family GPY04_RS01515 PF00037 4Fe-4S binding domain GPY04_RS01525 PF04381 Putative exonuclease, RdgC GPY04_RS01530 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS01530 PF00072 Response regulator receiver domain GPY04_RS01535 PF11808 Phosphate regulon sensor protein PhoR GPY04_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS01535 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS01535 PF00989 PAS fold GPY04_RS01540 PF12849 PBP superfamily domain GPY04_RS01545 PF02541 Ppx/GppA phosphatase family GPY04_RS01550 PF13090 Polyphosphate kinase C-terminal domain 2 GPY04_RS01550 PF02503 Polyphosphate kinase middle domain GPY04_RS01550 PF13089 Polyphosphate kinase N-terminal domain GPY04_RS01550 PF17941 Polyphosphate kinase C-terminal domain 1 GPY04_RS01555 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS01560 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS01565 PF00005 ABC transporter GPY04_RS01570 PF01895 PhoU domain GPY04_RS01575 PF03976 Polyphosphate kinase 2 (PPK2) GPY04_RS01580 PF03932 CutC family GPY04_RS01585 PF10417 C-terminal domain of 1-Cys peroxiredoxin GPY04_RS01585 PF00578 AhpC/TSA family GPY04_RS01590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS01590 PF03466 LysR substrate binding domain GPY04_RS01595 PF01274 Malate synthase GPY04_RS01600 PF00463 Isocitrate lyase family GPY04_RS01605 PF00571 CBS domain GPY04_RS01610 PF02547 Queuosine biosynthesis protein GPY04_RS01615 PF01702 Queuine tRNA-ribosyltransferase GPY04_RS01620 PF02699 Preprotein translocase subunit GPY04_RS01625 PF02355 Protein export membrane protein GPY04_RS01625 PF07549 SecD/SecF GG Motif GPY04_RS01625 PF13721 SecD export protein N-terminal TM region GPY04_RS01630 PF07549 SecD/SecF GG Motif GPY04_RS01630 PF02355 Protein export membrane protein GPY04_RS01635 PF00459 Inositol monophosphatase family GPY04_RS01640 PF00588 SpoU rRNA Methylase family GPY04_RS01645 PF02082 Transcriptional regulator GPY04_RS01650 PF00266 Aminotransferase class-V GPY04_RS01655 PF01592 NifU-like N terminal domain GPY04_RS01660 PF01521 Iron-sulphur cluster biosynthesis GPY04_RS01665 PF00226 DnaJ domain GPY04_RS01665 PF07743 HSCB C-terminal oligomerisation domain GPY04_RS01670 PF00012 Hsp70 protein GPY04_RS01675 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY04_RS01680 PF04384 Iron-sulphur cluster assembly GPY04_RS01685 PF00883 Cytosol aminopeptidase family, catalytic domain GPY04_RS01685 PF12404 Peptidase GPY04_RS01690 PF00334 Nucleoside diphosphate kinase GPY04_RS01695 PF04055 Radical SAM superfamily GPY04_RS01700 PF13464 Domain of unknown function (DUF4115) GPY04_RS01705 PF04551 GcpE protein GPY04_RS01710 PF03129 Anticodon binding domain GPY04_RS01710 PF13393 Histidyl-tRNA synthetase GPY04_RS01715 PF09976 Tetratricopeptide repeat-like domain GPY04_RS01720 PF13360 PQQ-like domain GPY04_RS01725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GPY04_RS01725 PF01926 50S ribosome-binding GTPase GPY04_RS01740 PF02601 Exonuclease VII, large subunit GPY04_RS01740 PF13742 OB-fold nucleic acid binding domain GPY04_RS01745 PF00571 CBS domain GPY04_RS01745 PF00478 IMP dehydrogenase / GMP reductase domain GPY04_RS01750 PF02540 NAD synthase GPY04_RS01750 PF00958 GMP synthase C terminal domain GPY04_RS01750 PF00117 Glutamine amidotransferase class-I GPY04_RS01755 PF00704 Glycosyl hydrolases family 18 GPY04_RS01755 PF06483 Chitinase C GPY04_RS01760 PF01184 GPR1/FUN34/yaaH family GPY04_RS01765 PF00857 Isochorismatase family GPY04_RS01765 PF00550 Phosphopantetheine attachment site GPY04_RS01770 PF00501 AMP-binding enzyme GPY04_RS01770 PF13193 AMP-binding enzyme C-terminal domain GPY04_RS01775 PF00425 chorismate binding enzyme GPY04_RS01790 PF01497 Periplasmic binding protein GPY04_RS01795 PF01032 FecCD transport family GPY04_RS01800 PF01032 FecCD transport family GPY04_RS01805 PF00005 ABC transporter GPY04_RS01810 PF01648 4'-phosphopantetheinyl transferase superfamily GPY04_RS01810 PF17837 4'-phosphopantetheinyl transferase N-terminal domain GPY04_RS01815 PF03466 LysR substrate binding domain GPY04_RS01815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS01820 PF14863 Alkyl sulfatase dimerisation GPY04_RS01820 PF14864 Alkyl sulfatase C-terminal GPY04_RS01820 PF00753 Metallo-beta-lactamase superfamily GPY04_RS01825 PF01235 Sodium:alanine symporter family GPY04_RS01830 PF01266 FAD dependent oxidoreductase GPY04_RS01835 PF03466 LysR substrate binding domain GPY04_RS01835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS01850 PF12431 Transcriptional regulator GPY04_RS01850 PF00072 Response regulator receiver domain GPY04_RS01855 PF17203 Single cache domain 3 GPY04_RS01855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS01860 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit GPY04_RS01865 PF00364 Biotin-requiring enzyme GPY04_RS01865 PF02436 Conserved carboxylase domain GPY04_RS01865 PF00682 HMGL-like GPY04_RS01870 PF04277 Oxaloacetate decarboxylase, gamma chain GPY04_RS01875 PF03390 2-hydroxycarboxylate transporter family GPY04_RS01880 PF08218 Citrate lyase ligase C-terminal domain GPY04_RS01885 PF06857 Malonate decarboxylase delta subunit (MdcD) GPY04_RS01890 PF03328 HpcH/HpaI aldolase/citrate lyase family GPY04_RS01895 PF04223 Citrate lyase, alpha subunit (CitF) GPY04_RS01900 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GPY04_RS01905 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GPY04_RS01915 PF00588 SpoU rRNA Methylase family GPY04_RS01915 PF08032 RNA 2'-O ribose methyltransferase substrate binding GPY04_RS01920 PF11953 Domain of unknown function (DUF3470) GPY04_RS01920 PF00037 4Fe-4S binding domain GPY04_RS01990 PF00171 Aldehyde dehydrogenase family GPY04_RS01995 PF00041 Fibronectin type III domain GPY04_RS01995 PF12561 ToxR activated gene A lipoprotein domain GPY04_RS02010 PF08534 Redoxin GPY04_RS02015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS02020 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS02030 PF05946 Toxin-coregulated pilus subunit TcpA GPY04_RS02030 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS02040 PF10671 Toxin co-regulated pilus biosynthesis protein Q GPY04_RS02060 PF17456 Toxin-coregulated pilus protein S GPY04_RS02065 PF00437 Type II/IV secretion system protein GPY04_RS02070 PF00482 Type II secretion system (T2SS), protein F GPY04_RS02075 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F GPY04_RS02080 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family GPY04_RS02085 PF06750 Bacterial Peptidase A24 N-terminal domain GPY04_RS02085 PF01478 Type IV leader peptidase family GPY04_RS02090 PF02743 Cache domain GPY04_RS02090 PF00672 HAMP domain GPY04_RS02090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS02105 PF04225 Opacity-associated protein A LysM-like domain GPY04_RS02105 PF01551 Peptidase family M23 GPY04_RS02115 PF13322 Domain of unknown function (DUF4092) GPY04_RS02115 PF13402 Peptidase M60, enhancin and enhancin-like GPY04_RS02115 PF17291 N-terminal domain of M60-like peptidases GPY04_RS02120 PF00589 Phage integrase family GPY04_RS02120 PF13356 Arm DNA-binding domain GPY04_RS02130 PF00589 Phage integrase family GPY04_RS02130 PF13356 Arm DNA-binding domain GPY04_RS02140 PF01668 SmpB protein GPY04_RS02145 PF03364 Polyketide cyclase / dehydrase and lipid transport GPY04_RS02150 PF03658 RnfH family Ubiquitin GPY04_RS02155 PF04355 SmpA / OmlA family GPY04_RS02160 PF02463 RecF/RecN/SMC N terminal domain GPY04_RS02165 PF01513 ATP-NAD kinase GPY04_RS02170 PF01025 GrpE GPY04_RS02175 PF00012 Hsp70 protein GPY04_RS02180 PF00684 DnaJ central domain GPY04_RS02180 PF01556 DnaJ C terminal domain GPY04_RS02180 PF00226 DnaJ domain GPY04_RS02185 PF00114 Pilin (bacterial filament) GPY04_RS02185 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS02190 PF14245 Type IV pilin PilA GPY04_RS02190 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS02215 PF03806 AbgT putative transporter family GPY04_RS02220 PF14437 MafB19-like deaminase GPY04_RS02225 PF01464 Transglycosylase SLT domain GPY04_RS02225 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY04_RS02235 PF02769 AIR synthase related protein, C-terminal domain GPY04_RS02235 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GPY04_RS02235 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal GPY04_RS02240 PF01797 Transposase IS200 like GPY04_RS02250 PF06786 Uncharacterised protein family (UPF0253) GPY04_RS02260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY04_RS02260 PF04073 Aminoacyl-tRNA editing domain GPY04_RS02260 PF03129 Anticodon binding domain GPY04_RS02265 PF18389 TrmO C-terminal domain GPY04_RS02265 PF01980 tRNA-methyltransferase O GPY04_RS02270 PF01197 Ribosomal protein L31 GPY04_RS02275 PF00444 Ribosomal protein L36 GPY04_RS02280 PF03806 AbgT putative transporter family GPY04_RS02285 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GPY04_RS02295 PF13302 Acetyltransferase (GNAT) domain GPY04_RS02310 PF04287 tRNA pseudouridine synthase C GPY04_RS02315 PF00849 RNA pseudouridylate synthase GPY04_RS02320 PF13292 1-deoxy-D-xylulose-5-phosphate synthase GPY04_RS02320 PF02779 Transketolase, pyrimidine binding domain GPY04_RS02320 PF02780 Transketolase, C-terminal domain GPY04_RS02325 PF00348 Polyprenyl synthetase GPY04_RS02330 PF02609 Exonuclease VII small subunit GPY04_RS02335 PF01618 MotA/TolQ/ExbB proton channel family GPY04_RS02340 PF00691 OmpA family GPY04_RS02340 PF13677 Membrane MotB of proton-channel complex MotA/MotB GPY04_RS02345 PF02568 Thiamine biosynthesis protein (ThiI) GPY04_RS02345 PF02926 THUMP domain GPY04_RS02350 PF03466 LysR substrate binding domain GPY04_RS02350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS02355 PF04241 Protein of unknown function (DUF423) GPY04_RS02360 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GPY04_RS02360 PF01367 5'-3' exonuclease, C-terminal SAM fold GPY04_RS02365 PF03641 Possible lysine decarboxylase GPY04_RS02365 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases GPY04_RS02365 PF11892 Domain of unknown function (DUF3412) GPY04_RS02370 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS02380 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GPY04_RS02380 PF14489 QueF-like protein GPY04_RS02385 PF07348 Syd protein (SUKH-2) GPY04_RS02390 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) GPY04_RS02395 PF03180 NLPA lipoprotein GPY04_RS02400 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS02405 PF00005 ABC transporter GPY04_RS02405 PF09383 NIL domain GPY04_RS02415 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS02420 PF02378 Phosphotransferase system, EIIC GPY04_RS02420 PF00367 phosphotransferase system, EIIB GPY04_RS02425 PF16657 Maltogenic Amylase, C-terminal domain GPY04_RS02425 PF00128 Alpha amylase, catalytic domain GPY04_RS02450 PF13533 Biotin-lipoyl like GPY04_RS02455 PF00873 AcrB/AcrD/AcrF family GPY04_RS02460 PF01451 Low molecular weight phosphotyrosine protein phosphatase GPY04_RS02465 PF02350 UDP-N-acetylglucosamine 2-epimerase GPY04_RS02470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GPY04_RS02470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GPY04_RS02470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain GPY04_RS02475 PF12464 Maltose acetyltransferase GPY04_RS02475 PF14602 Hexapeptide repeat of succinyl-transferase GPY04_RS02495 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS02505 PF00862 Sucrose synthase GPY04_RS02505 PF00534 Glycosyl transferases group 1 GPY04_RS02515 PF03808 Glycosyl transferase WecB/TagA/CpsF family GPY04_RS02530 PF17945 Beta/Gamma crystallin GPY04_RS02530 PF12561 ToxR activated gene A lipoprotein domain GPY04_RS02545 PF02397 Bacterial sugar transferase GPY04_RS02555 PF18412 Outer-membrane lipoprotein Wza C-terminal domain GPY04_RS02555 PF10531 SLBB domain GPY04_RS02555 PF02563 Polysaccharide biosynthesis/export protein GPY04_RS02560 PF13614 AAA domain GPY04_RS02560 PF13807 G-rich domain on putative tyrosine kinase GPY04_RS02560 PF02706 Chain length determinant protein GPY04_RS02580 PF00464 Serine hydroxymethyltransferase GPY04_RS02590 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family GPY04_RS02590 PF04055 Radical SAM superfamily GPY04_RS02595 PF03099 Biotin/lipoate A/B protein ligase family GPY04_RS02600 PF04359 Protein of unknown function (DUF493) GPY04_RS02605 PF07943 Penicillin-binding protein 5, C-terminal domain GPY04_RS02605 PF00768 D-alanyl-D-alanine carboxypeptidase GPY04_RS02610 PF05036 Sporulation related domain GPY04_RS02610 PF03330 Lytic transglycolase GPY04_RS02615 PF01098 Cell cycle protein GPY04_RS02620 PF00905 Penicillin binding protein transpeptidase domain GPY04_RS02620 PF03717 Penicillin-binding Protein dimerisation domain GPY04_RS02625 PF02590 Predicted SPOUT methyltransferase GPY04_RS02635 PF14840 Processivity clamp loader gamma complex DNA pol III C-term GPY04_RS02635 PF06144 DNA polymerase III, delta subunit GPY04_RS02640 PF04390 Lipopolysaccharide-assembly GPY04_RS02645 PF13603 Leucyl-tRNA synthetase, Domain 2 GPY04_RS02645 PF08264 Anticodon-binding domain of tRNA GPY04_RS02645 PF00133 tRNA synthetases class I (I, L, M and V) GPY04_RS02650 PF07295 Zinc-ribbon containing domain GPY04_RS02655 PF00795 Carbon-nitrogen hydrolase GPY04_RS02660 PF00571 CBS domain GPY04_RS02660 PF03471 Transporter associated domain GPY04_RS02665 PF02130 Uncharacterized protein family UPF0054 GPY04_RS02670 PF02562 PhoH-like protein GPY04_RS02675 PF00919 Uncharacterized protein family UPF0004 GPY04_RS02675 PF01938 TRAM domain GPY04_RS02675 PF04055 Radical SAM superfamily GPY04_RS02680 PF01494 FAD binding domain GPY04_RS02685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GPY04_RS02690 PF02896 PEP-utilising enzyme, TIM barrel domain GPY04_RS02690 PF00391 PEP-utilising enzyme, mobile domain GPY04_RS02690 PF05524 PEP-utilising enzyme, N-terminal GPY04_RS02695 PF00381 PTS HPr component phosphorylation site GPY04_RS02705 PF00291 Pyridoxal-phosphate dependent enzyme GPY04_RS02715 PF04354 ZipA, C-terminal FtsZ-binding domain GPY04_RS02720 PF12826 Helix-hairpin-helix motif GPY04_RS02720 PF00533 BRCA1 C Terminus (BRCT) domain GPY04_RS02720 PF01653 NAD-dependent DNA ligase adenylation domain GPY04_RS02720 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GPY04_RS02720 PF03120 NAD-dependent DNA ligase OB-fold domain GPY04_RS02725 PF13609 Gram-negative porin GPY04_RS02735 PF13411 MerR HTH family regulatory protein GPY04_RS02740 PF01957 NfeD-like C-terminal, partner-binding GPY04_RS02745 PF01145 SPFH domain / Band 7 family GPY04_RS02745 PF16200 C-terminal region of band_7 GPY04_RS02750 PF00085 Thioredoxin GPY04_RS02760 PF00106 short chain dehydrogenase GPY04_RS02765 PF08338 Domain of unknown function (DUF1731) GPY04_RS02765 PF01370 NAD dependent epimerase/dehydratase family GPY04_RS02770 PF12850 Calcineurin-like phosphoesterase superfamily domain GPY04_RS02780 PF17323 Trans-membrane regulatory protein ToxS GPY04_RS02785 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS02790 PF00183 Hsp90 protein GPY04_RS02795 PF05191 Adenylate kinase, active site lid GPY04_RS02800 PF00762 Ferrochelatase GPY04_RS02805 PF00854 POT family GPY04_RS02810 PF02357 Transcription termination factor nusG GPY04_RS02815 PF13537 Glutamine amidotransferase domain GPY04_RS02815 PF00733 Asparagine synthase GPY04_RS02820 PF02254 TrkA-N domain GPY04_RS02820 PF00999 Sodium/hydrogen exchanger family GPY04_RS02825 PF01047 MarR family GPY04_RS02825 PF00480 ROK family GPY04_RS02830 PF01979 Amidohydrolase family GPY04_RS02835 PF00367 phosphotransferase system, EIIB GPY04_RS02835 PF02378 Phosphotransferase system, EIIC GPY04_RS02835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 GPY04_RS02840 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY04_RS02840 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GPY04_RS02850 PF01416 tRNA pseudouridine synthase GPY04_RS02855 PF17848 Acetyl-coA carboxylase zinc finger domain GPY04_RS02855 PF01039 Carboxyl transferase domain GPY04_RS02860 PF08245 Mur ligase middle domain GPY04_RS02860 PF02875 Mur ligase family, glutamate ligase domain GPY04_RS02865 PF05036 Sporulation related domain GPY04_RS02870 PF02674 Colicin V production protein GPY04_RS02875 PF00156 Phosphoribosyl transferase domain GPY04_RS02880 PF13726 Na+-H+ antiporter family GPY04_RS02880 PF03553 Na+/H+ antiporter family GPY04_RS02885 PF00929 Exonuclease GPY04_RS02890 PF00691 OmpA family GPY04_RS02890 PF18393 MotY N-terminal domain GPY04_RS02895 PF10952 Protein of unknown function (DUF2753) GPY04_RS02900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY04_RS02905 PF00633 Helix-hairpin-helix motif GPY04_RS02905 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY04_RS02905 PF10576 Iron-sulfur binding domain of endonuclease III GPY04_RS02910 PF02508 Rnf-Nqr subunit, membrane protein GPY04_RS02915 PF04205 FMN-binding domain GPY04_RS02920 PF03116 NQR2, RnfD, RnfE family GPY04_RS02925 PF13375 RnfC Barrel sandwich hybrid domain GPY04_RS02925 PF10531 SLBB domain GPY04_RS02925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GPY04_RS02925 PF12838 4Fe-4S dicluster domain GPY04_RS02930 PF04060 Putative Fe-S cluster GPY04_RS02935 PF02508 Rnf-Nqr subunit, membrane protein GPY04_RS02945 PF04851 Type III restriction enzyme, res subunit GPY04_RS02945 PF02151 UvrB/uvrC motif GPY04_RS02945 PF12344 Ultra-violet resistance protein B GPY04_RS02945 PF00271 Helicase conserved C-terminal domain GPY04_RS02945 PF17757 UvrB interaction domain GPY04_RS02950 PF02954 Bacterial regulatory protein, Fis family GPY04_RS02950 PF00072 Response regulator receiver domain GPY04_RS02950 PF00158 Sigma-54 interaction domain GPY04_RS02955 PF01627 Hpt domain GPY04_RS02960 PF01933 Uncharacterised protein family UPF0052 GPY04_RS02965 PF04055 Radical SAM superfamily GPY04_RS02965 PF06463 Molybdenum Cofactor Synthesis C GPY04_RS02970 PF00994 Probable molybdopterin binding domain GPY04_RS02975 PF01967 MoaC family GPY04_RS02980 PF02597 ThiS family GPY04_RS02985 PF02391 MoaE protein GPY04_RS02990 PF07694 5TMR of 5TMR-LYT GPY04_RS02990 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS02995 PF00392 Bacterial regulatory proteins, gntR family GPY04_RS02995 PF03061 Thioesterase superfamily GPY04_RS02995 PF07085 DRTGG domain GPY04_RS02995 PF00571 CBS domain GPY04_RS03000 PF00403 Heavy-metal-associated domain GPY04_RS03005 PF01048 Phosphorylase superfamily GPY04_RS03015 PF09334 tRNA synthetases class I (M) GPY04_RS03015 PF01588 Putative tRNA binding domain GPY04_RS03020 PF10609 NUBPL iron-transfer P-loop NTPase GPY04_RS03025 PF00485 Phosphoribulokinase / Uridine kinase family GPY04_RS03030 PF05170 AsmA family GPY04_RS03035 PF12557 Cob(I)alamin adenosyltransferase N terminal GPY04_RS03035 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP GPY04_RS03040 PF01451 Low molecular weight phosphotyrosine protein phosphatase GPY04_RS03045 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY04_RS03060 PF04542 Sigma-70 region 2 GPY04_RS03060 PF08281 Sigma-70, region 4 GPY04_RS03065 PF00108 Thiolase, N-terminal domain GPY04_RS03065 PF02803 Thiolase, C-terminal domain GPY04_RS03070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GPY04_RS03070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GPY04_RS03070 PF00378 Enoyl-CoA hydratase/isomerase GPY04_RS03075 PF00881 Nitroreductase family GPY04_RS03080 PF03466 LysR substrate binding domain GPY04_RS03080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS03085 PF00072 Response regulator receiver domain GPY04_RS03095 PF04304 Protein of unknown function (DUF454) GPY04_RS03100 PF00156 Phosphoribosyl transferase domain GPY04_RS03105 PF12169 DNA polymerase III subunits gamma and tau domain III GPY04_RS03105 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GPY04_RS03105 PF12170 DNA polymerase III tau subunit V interacting with alpha GPY04_RS03110 PF02575 YbaB/EbfC DNA-binding family GPY04_RS03115 PF13662 Toprim domain GPY04_RS03115 PF02132 RecR protein GPY04_RS03120 PF03692 Putative zinc- or iron-chelating domain GPY04_RS03125 PF03692 Putative zinc- or iron-chelating domain GPY04_RS03130 PF00106 short chain dehydrogenase GPY04_RS03135 PF01343 Peptidase family S49 GPY04_RS03135 PF08496 Peptidase family S49 N-terminal GPY04_RS03140 PF00291 Pyridoxal-phosphate dependent enzyme GPY04_RS03145 PF13404 AsnC-type helix-turn-helix domain GPY04_RS03145 PF01037 Lrp/AsnC ligand binding domain GPY04_RS03160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY04_RS03170 PF08448 PAS fold GPY04_RS03170 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS03180 PF01022 Bacterial regulatory protein, arsR family GPY04_RS03185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY04_RS03185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY04_RS03200 PF06483 Chitinase C GPY04_RS03200 PF00704 Glycosyl hydrolases family 18 GPY04_RS03210 PF01161 Phosphatidylethanolamine-binding protein GPY04_RS03230 PF03481 Putative GTP-binding controlling metal-binding GPY04_RS03230 PF01300 Telomere recombination GPY04_RS03245 PF00072 Response regulator receiver domain GPY04_RS03255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS03255 PF13426 PAS domain GPY04_RS03255 PF13188 PAS domain GPY04_RS03255 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS03255 PF00989 PAS fold GPY04_RS03260 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS03265 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS03265 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS03265 PF00563 EAL domain GPY04_RS03265 PF13188 PAS domain GPY04_RS03270 PF00158 Sigma-54 interaction domain GPY04_RS03270 PF00072 Response regulator receiver domain GPY04_RS03270 PF02954 Bacterial regulatory protein, Fis family GPY04_RS03275 PF00072 Response regulator receiver domain GPY04_RS03275 PF13188 PAS domain GPY04_RS03275 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS03275 PF08448 PAS fold GPY04_RS03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS03285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY04_RS03290 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS03295 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS03295 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY04_RS03300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY04_RS03300 PF00005 ABC transporter GPY04_RS03305 PF00005 ABC transporter GPY04_RS03305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY04_RS03310 PF13409 Glutathione S-transferase, N-terminal domain GPY04_RS03315 PF01515 Phosphate acetyl/butaryl transferase GPY04_RS03315 PF07085 DRTGG domain GPY04_RS03320 PF00871 Acetokinase family GPY04_RS03325 PF04217 Protein of unknown function, DUF412 GPY04_RS03330 PF09905 DNA-binding protein VF530 GPY04_RS03340 PF02653 Branched-chain amino acid transport system / permease component GPY04_RS03345 PF00005 ABC transporter GPY04_RS03350 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS03355 PF01207 Dihydrouridine synthase (Dus) GPY04_RS03360 PF01043 SecA preprotein cross-linking domain GPY04_RS03360 PF02810 SEC-C motif GPY04_RS03360 PF07516 SecA Wing and Scaffold domain GPY04_RS03360 PF07517 SecA DEAD-like domain GPY04_RS03365 PF03548 Outer membrane lipoprotein carrier protein LolA GPY04_RS03370 PF12002 MgsA AAA+ ATPase C terminal GPY04_RS03370 PF16193 AAA C-terminal domain GPY04_RS03370 PF00004 ATPase family associated with various cellular activities (AAA) GPY04_RS03375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY04_RS03375 PF02403 Seryl-tRNA synthetase N-terminal domain GPY04_RS03380 PF00202 Aminotransferase class-III GPY04_RS03385 PF06968 Biotin and Thiamin Synthesis associated domain GPY04_RS03385 PF04055 Radical SAM superfamily GPY04_RS03390 PF00155 Aminotransferase class I and II GPY04_RS03395 PF08241 Methyltransferase domain GPY04_RS03410 PF01435 Peptidase family M48 GPY04_RS03420 PF00106 short chain dehydrogenase GPY04_RS03445 PF16036 Chalcone isomerase-like GPY04_RS03455 PF08328 Adenylosuccinate lyase C-terminal GPY04_RS03455 PF00206 Lyase GPY04_RS03460 PF04356 Protein of unknown function (DUF489) GPY04_RS03470 PF00294 pfkB family carbohydrate kinase GPY04_RS03475 PF00816 H-NS histone family GPY04_RS03480 PF03553 Na+/H+ antiporter family GPY04_RS03485 PF08029 HisG, C-terminal domain GPY04_RS03485 PF01634 ATP phosphoribosyltransferase GPY04_RS03490 PF00815 Histidinol dehydrogenase GPY04_RS03495 PF00155 Aminotransferase class I and II GPY04_RS03500 PF08645 Polynucleotide kinase 3 phosphatase GPY04_RS03500 PF00475 Imidazoleglycerol-phosphate dehydratase GPY04_RS03505 PF00117 Glutamine amidotransferase class-I GPY04_RS03510 PF00977 Histidine biosynthesis protein GPY04_RS03515 PF00977 Histidine biosynthesis protein GPY04_RS03520 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GPY04_RS03520 PF01502 Phosphoribosyl-AMP cyclohydrolase GPY04_RS03525 PF00849 RNA pseudouridylate synthase GPY04_RS03530 PF03971 Monomeric isocitrate dehydrogenase GPY04_RS03535 PF00313 'Cold-shock' DNA-binding domain GPY04_RS03540 PF02617 ATP-dependent Clp protease adaptor protein ClpS GPY04_RS03545 PF00004 ATPase family associated with various cellular activities (AAA) GPY04_RS03545 PF07724 AAA domain (Cdc48 subfamily) GPY04_RS03545 PF17871 AAA lid domain GPY04_RS03545 PF02861 Clp amino terminal domain, pathogenicity island component GPY04_RS03545 PF10431 C-terminal, D2-small domain, of ClpB protein GPY04_RS03550 PF06826 Predicted Permease Membrane Region GPY04_RS03550 PF02080 TrkA-C domain GPY04_RS03555 PF00462 Glutaredoxin GPY04_RS03560 PF00465 Iron-containing alcohol dehydrogenase GPY04_RS03560 PF00171 Aldehyde dehydrogenase family GPY04_RS03565 PF01380 SIS domain GPY04_RS03565 PF01418 Helix-turn-helix domain, rpiR family GPY04_RS03570 PF00282 Pyridoxal-dependent decarboxylase conserved domain GPY04_RS03580 PF03956 Lysine exporter LysO GPY04_RS03590 PF04993 TfoX N-terminal domain GPY04_RS03590 PF04994 TfoX C-terminal domain GPY04_RS03605 PF00989 PAS fold GPY04_RS03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS03605 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS03615 PF00266 Aminotransferase class-V GPY04_RS03635 PF08003 Protein of unknown function (DUF1698) GPY04_RS03640 PF13649 Methyltransferase domain GPY04_RS03645 PF01904 Protein of unknown function DUF72 GPY04_RS03650 PF01336 OB-fold nucleic acid binding domain GPY04_RS03650 PF02938 GAD domain GPY04_RS03650 PF00152 tRNA synthetases class II (D, K and N) GPY04_RS03655 PF00265 Thymidine kinase GPY04_RS03660 PF00375 Sodium:dicarboxylate symporter family GPY04_RS03665 PF00290 Tryptophan synthase alpha chain GPY04_RS03670 PF00291 Pyridoxal-phosphate dependent enzyme GPY04_RS03675 PF00218 Indole-3-glycerol phosphate synthase GPY04_RS03675 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GPY04_RS03680 PF02885 Glycosyl transferase family, helical bundle domain GPY04_RS03680 PF00591 Glycosyl transferase family, a/b domain GPY04_RS03685 PF00117 Glutamine amidotransferase class-I GPY04_RS03690 PF00425 chorismate binding enzyme GPY04_RS03690 PF04715 Anthranilate synthase component I, N terminal region GPY04_RS03695 PF08056 Tryptophan operon leader peptide GPY04_RS03700 PF02811 PHP domain GPY04_RS03705 PF01300 Telomere recombination GPY04_RS03710 PF01479 S4 domain GPY04_RS03710 PF00849 RNA pseudouridylate synthase GPY04_RS03715 PF00005 ABC transporter GPY04_RS03715 PF00664 ABC transporter transmembrane region GPY04_RS03720 PF00005 ABC transporter GPY04_RS03720 PF00664 ABC transporter transmembrane region GPY04_RS03725 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS03735 PF00266 Aminotransferase class-V GPY04_RS03740 PF08448 PAS fold GPY04_RS03740 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS03745 PF02698 DUF218 domain GPY04_RS03755 PF00390 Malic enzyme, N-terminal domain GPY04_RS03755 PF03949 Malic enzyme, NAD binding domain GPY04_RS03765 PF01259 SAICAR synthetase GPY04_RS03785 PF13488 Glycine zipper GPY04_RS03785 PF00691 OmpA family GPY04_RS03800 PF01565 FAD binding domain GPY04_RS03800 PF02913 FAD linked oxidases, C-terminal domain GPY04_RS03800 PF13183 4Fe-4S dicluster domain GPY04_RS03805 PF04191 Phospholipid methyltransferase GPY04_RS03810 PF00089 Trypsin GPY04_RS03820 PF00221 Aromatic amino acid lyase GPY04_RS03825 PF17391 Urocanase N-terminal domain GPY04_RS03825 PF01175 Urocanase Rossmann-like domain GPY04_RS03825 PF17392 Urocanase C-terminal domain GPY04_RS03830 PF00491 Arginase family GPY04_RS03835 PF01979 Amidohydrolase family GPY04_RS03840 PF00392 Bacterial regulatory proteins, gntR family GPY04_RS03840 PF07702 UTRA domain GPY04_RS03850 PF04269 Protein of unknown function, DUF440 GPY04_RS03855 PF08207 Elongation factor P (EF-P) KOW-like domain GPY04_RS03855 PF01132 Elongation factor P (EF-P) OB domain GPY04_RS03855 PF09285 Elongation factor P, C-terminal GPY04_RS03865 PF13426 PAS domain GPY04_RS03865 PF00563 EAL domain GPY04_RS03865 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS03870 PF03104 DNA polymerase family B, exonuclease domain GPY04_RS03870 PF00136 DNA polymerase family B GPY04_RS03875 PF00072 Response regulator receiver domain GPY04_RS03875 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS03880 PF08459 UvrC Helix-hairpin-helix N-terminal GPY04_RS03880 PF02151 UvrB/uvrC motif GPY04_RS03880 PF01541 GIY-YIG catalytic domain GPY04_RS03885 PF01066 CDP-alcohol phosphatidyltransferase GPY04_RS03910 PF00072 Response regulator receiver domain GPY04_RS03910 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS03920 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GPY04_RS03920 PF01409 tRNA synthetases class II core domain (F) GPY04_RS03925 PF03484 tRNA synthetase B5 domain GPY04_RS03925 PF03147 Ferredoxin-fold anticodon binding domain GPY04_RS03925 PF01588 Putative tRNA binding domain GPY04_RS03925 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GPY04_RS03925 PF03483 B3/4 domain GPY04_RS03930 PF00216 Bacterial DNA-binding protein GPY04_RS03945 PF05724 Thiopurine S-methyltransferase (TPMT) GPY04_RS03955 PF02222 ATP-grasp domain GPY04_RS03965 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region GPY04_RS03965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY04_RS03970 PF04172 LrgB-like family GPY04_RS03975 PF03788 LrgA family GPY04_RS03980 PF08411 Exonuclease C-terminal GPY04_RS03980 PF00929 Exonuclease GPY04_RS03990 PF01641 SelR domain GPY04_RS03995 PF02277 Phosphoribosyltransferase GPY04_RS04000 PF02654 Cobalamin-5-phosphate synthase GPY04_RS04005 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase GPY04_RS04015 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family GPY04_RS04020 PF01032 FecCD transport family GPY04_RS04025 PF00005 ABC transporter GPY04_RS04040 PF17200 Single Cache domain 2 GPY04_RS04040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS04040 PF00672 HAMP domain GPY04_RS04055 PF00994 Probable molybdopterin binding domain GPY04_RS04065 PF00175 Oxidoreductase NAD-binding domain GPY04_RS04065 PF00970 Oxidoreductase FAD-binding domain GPY04_RS04065 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY04_RS04070 PF00268 Ribonucleotide reductase, small chain GPY04_RS04075 PF00317 Ribonucleotide reductase, all-alpha domain GPY04_RS04075 PF03477 ATP cone domain GPY04_RS04075 PF02867 Ribonucleotide reductase, barrel domain GPY04_RS04085 PF03989 DNA gyrase C-terminal domain, beta-propeller GPY04_RS04085 PF00521 DNA gyrase/topoisomerase IV, subunit A GPY04_RS04100 PF07690 Major Facilitator Superfamily GPY04_RS04110 PF00925 GTP cyclohydrolase II GPY04_RS04135 PF01471 Putative peptidoglycan binding domain GPY04_RS04135 PF03734 L,D-transpeptidase catalytic domain GPY04_RS04140 PF05951 Bacterial protein of unknown function (DUF882) GPY04_RS04145 PF00753 Metallo-beta-lactamase superfamily GPY04_RS04160 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY04_RS04170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY04_RS04175 PF07730 Histidine kinase GPY04_RS04175 PF17200 Single Cache domain 2 GPY04_RS04180 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS04180 PF00072 Response regulator receiver domain GPY04_RS04185 PF01047 MarR family GPY04_RS04190 PF02028 BCCT, betaine/carnitine/choline family transporter GPY04_RS04195 PF01522 Polysaccharide deacetylase GPY04_RS04200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY04_RS04205 PF02378 Phosphotransferase system, EIIC GPY04_RS04210 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit GPY04_RS04215 PF11975 Family 4 glycosyl hydrolase C-terminal domain GPY04_RS04215 PF02056 Family 4 glycosyl hydrolase GPY04_RS04220 PF04794 YdjC-like protein GPY04_RS04225 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS04230 PF13506 Glycosyl transferase family 21 GPY04_RS04235 PF04349 Periplasmic glucan biosynthesis protein, MdoG GPY04_RS04240 PF17200 Single Cache domain 2 GPY04_RS04240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS04240 PF00672 HAMP domain GPY04_RS04255 PF00155 Aminotransferase class I and II GPY04_RS04270 PF08543 Phosphomethylpyrimidine kinase GPY04_RS04275 PF01336 OB-fold nucleic acid binding domain GPY04_RS04275 PF00152 tRNA synthetases class II (D, K and N) GPY04_RS04280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS04280 PF00672 HAMP domain GPY04_RS04285 PF01242 6-pyruvoyl tetrahydropterin synthase GPY04_RS04290 PF03313 Serine dehydratase alpha chain GPY04_RS04290 PF03315 Serine dehydratase beta chain GPY04_RS04295 PF03222 Tryptophan/tyrosine permease family GPY04_RS04300 PF00293 NUDIX domain GPY04_RS04305 PF04715 Anthranilate synthase component I, N terminal region GPY04_RS04305 PF00425 chorismate binding enzyme GPY04_RS04320 PF04317 YcjX-like family, DUF463 GPY04_RS04325 PF05128 Domain of unknown function (DUF697) GPY04_RS04330 PF18024 Helix-turn-helix domain GPY04_RS04330 PF00158 Sigma-54 interaction domain GPY04_RS04335 PF13302 Acetyltransferase (GNAT) domain GPY04_RS04345 PF00892 EamA-like transporter family GPY04_RS04350 PF01168 Alanine racemase, N-terminal domain GPY04_RS04350 PF00842 Alanine racemase, C-terminal domain GPY04_RS04355 PF00672 HAMP domain GPY04_RS04355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS04360 PF00939 Sodium:sulfate symporter transmembrane region GPY04_RS04365 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY04_RS04365 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS04365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS04370 PF02954 Bacterial regulatory protein, Fis family GPY04_RS04370 PF00072 Response regulator receiver domain GPY04_RS04370 PF00158 Sigma-54 interaction domain GPY04_RS04375 PF04393 Protein of unknown function (DUF535) GPY04_RS04380 PF06629 MltA-interacting protein MipA GPY04_RS04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS04385 PF00672 HAMP domain GPY04_RS04385 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS04390 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS04390 PF00072 Response regulator receiver domain GPY04_RS04410 PF13407 Periplasmic binding protein domain GPY04_RS04415 PF00005 ABC transporter GPY04_RS04420 PF02653 Branched-chain amino acid transport system / permease component GPY04_RS04435 PF01970 Tripartite tricarboxylate transporter TctA family GPY04_RS04450 PF07729 FCD domain GPY04_RS04450 PF00392 Bacterial regulatory proteins, gntR family GPY04_RS04460 PF00285 Citrate synthase, C-terminal domain GPY04_RS04465 PF00694 Aconitase C-terminal domain GPY04_RS04465 PF00330 Aconitase family (aconitate hydratase) GPY04_RS04470 PF04303 PrpF protein GPY04_RS04475 PF16177 Acetyl-coenzyme A synthetase N-terminus GPY04_RS04475 PF00501 AMP-binding enzyme GPY04_RS04475 PF13193 AMP-binding enzyme C-terminal domain GPY04_RS04495 PF01797 Transposase IS200 like GPY04_RS04500 PF01546 Peptidase family M20/M25/M40 GPY04_RS04500 PF07687 Peptidase dimerisation domain GPY04_RS04505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY04_RS04510 PF04209 homogentisate 1,2-dioxygenase GPY04_RS04520 PF14497 Glutathione S-transferase, C-terminal domain GPY04_RS04520 PF02798 Glutathione S-transferase, N-terminal domain GPY04_RS04525 PF00072 Response regulator receiver domain GPY04_RS04530 PF01627 Hpt domain GPY04_RS04530 PF00072 Response regulator receiver domain GPY04_RS04530 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY04_RS04530 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS04530 PF00672 HAMP domain GPY04_RS04530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS04535 PF08534 Redoxin GPY04_RS04535 PF00462 Glutaredoxin GPY04_RS04540 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS04545 PF10672 S-adenosylmethionine-dependent methyltransferase GPY04_RS04545 PF17785 PUA-like domain GPY04_RS04550 PF00708 Acylphosphatase GPY04_RS04555 PF04358 DsrC like protein GPY04_RS04560 PF01027 Inhibitor of apoptosis-promoting Bax1 GPY04_RS04565 PF00005 ABC transporter GPY04_RS04570 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS04575 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS04580 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY04_RS04585 PF10414 Sirohaem synthase dimerisation region GPY04_RS04585 PF14824 Sirohaem biosynthesis protein central GPY04_RS04585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY04_RS04595 PF04055 Radical SAM superfamily GPY04_RS04600 PF06508 Queuosine biosynthesis protein QueC GPY04_RS04620 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS04620 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS04620 PF00563 EAL domain GPY04_RS04630 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS04630 PF17158 Membrane-associated sensor, integral membrane domain GPY04_RS04635 PF00012 Hsp70 protein GPY04_RS04640 PF00012 Hsp70 protein GPY04_RS04650 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS04650 PF00563 EAL domain GPY04_RS04650 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS04675 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold GPY04_RS04675 PF00271 Helicase conserved C-terminal domain GPY04_RS04675 PF04408 Helicase associated domain (HA2) GPY04_RS04675 PF00270 DEAD/DEAH box helicase GPY04_RS04675 PF11898 Domain of unknown function (DUF3418) GPY04_RS04685 PF00012 Hsp70 protein GPY04_RS04690 PF03099 Biotin/lipoate A/B protein ligase family GPY04_RS04690 PF10437 Bacterial lipoate protein ligase C-terminus GPY04_RS04700 PF03466 LysR substrate binding domain GPY04_RS04700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS04705 PF07690 Major Facilitator Superfamily GPY04_RS04710 PF00875 DNA photolyase GPY04_RS04710 PF03441 FAD binding domain of DNA photolyase GPY04_RS04715 PF00893 Small Multidrug Resistance protein GPY04_RS04720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS04720 PF00672 HAMP domain GPY04_RS04735 PF07194 P2 response regulator binding domain GPY04_RS04735 PF01627 Hpt domain GPY04_RS04735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS04735 PF02895 Signal transducing histidine kinase, homodimeric domain GPY04_RS04735 PF01584 CheW-like domain GPY04_RS04740 PF01627 Hpt domain GPY04_RS04740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS04740 PF01584 CheW-like domain GPY04_RS04740 PF00072 Response regulator receiver domain GPY04_RS04745 PF03705 CheR methyltransferase, all-alpha domain GPY04_RS04745 PF01739 CheR methyltransferase, SAM binding domain GPY04_RS04755 PF00072 Response regulator receiver domain GPY04_RS04755 PF01339 CheB methylesterase GPY04_RS04760 PF01584 CheW-like domain GPY04_RS04765 PF17202 Single cache domain 3 GPY04_RS04765 PF00672 HAMP domain GPY04_RS04765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS04770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS04770 PF00672 HAMP domain GPY04_RS04770 PF12729 Four helix bundle sensory module for signal transduction GPY04_RS04775 PF08447 PAS fold GPY04_RS04775 PF13426 PAS domain GPY04_RS04775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS04780 PF00271 Helicase conserved C-terminal domain GPY04_RS04780 PF00270 DEAD/DEAH box helicase GPY04_RS04790 PF02321 Outer membrane efflux protein GPY04_RS04795 PF00529 HlyD membrane-fusion protein of T1SS GPY04_RS04795 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY04_RS04800 PF07690 Major Facilitator Superfamily GPY04_RS04805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS04805 PF02743 Cache domain GPY04_RS04805 PF00672 HAMP domain GPY04_RS04810 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GPY04_RS04815 PF05638 Type VI secretion system effector, Hcp GPY04_RS04820 PF16671 Actin cross-linking domain GPY04_RS04820 PF04717 Type VI secretion system, phage-baseplate injector GPY04_RS04845 PF01810 LysE type translocator GPY04_RS04850 PF01235 Sodium:alanine symporter family GPY04_RS04865 PF13416 Bacterial extracellular solute-binding protein GPY04_RS04870 PF13416 Bacterial extracellular solute-binding protein GPY04_RS04875 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS04880 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS04885 PF08402 TOBE domain GPY04_RS04885 PF00005 ABC transporter GPY04_RS04905 PF01171 PP-loop family GPY04_RS04910 PF00582 Universal stress protein family GPY04_RS04915 PF00027 Cyclic nucleotide-binding domain GPY04_RS04915 PF13545 Crp-like helix-turn-helix domain GPY04_RS04930 PF00403 Heavy-metal-associated domain GPY04_RS04940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY04_RS04940 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP GPY04_RS04955 PF00115 Cytochrome C and Quinol oxidase polypeptide I GPY04_RS04970 PF09308 LuxQ, periplasmic GPY04_RS04970 PF00072 Response regulator receiver domain GPY04_RS04970 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS04970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS04975 PF00005 ABC transporter GPY04_RS04975 PF00664 ABC transporter transmembrane region GPY04_RS04975 PF03412 Peptidase C39 family GPY04_RS04985 PF00005 ABC transporter GPY04_RS04985 PF00664 ABC transporter transmembrane region GPY04_RS04985 PF03412 Peptidase C39 family GPY04_RS04995 PF02794 RTX toxin acyltransferase family GPY04_RS05000 PF07634 RtxA repeat GPY04_RS05000 PF16671 Actin cross-linking domain GPY04_RS05000 PF12146 Serine aminopeptidase, S33 GPY04_RS05000 PF11647 Membrane Localization Domain GPY04_RS05000 PF11713 Peptidase C80 family GPY04_RS05020 PF01381 Helix-turn-helix GPY04_RS05025 PF01376 Heat-labile enterotoxin beta chain GPY04_RS05030 PF01375 Heat-labile enterotoxin alpha chain GPY04_RS05035 PF05707 Zonular occludens toxin (Zot) GPY04_RS05040 PF10734 Protein of unknown function (DUF2523) GPY04_RS05045 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII GPY04_RS05065 PF01381 Helix-turn-helix GPY04_RS05175 PF06303 MatP N-terminal domain GPY04_RS05175 PF17414 MatP C-terminal ribbon-helix-helix domain GPY04_RS05180 PF13654 AAA domain GPY04_RS05180 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY04_RS05185 PF07977 FabA-like domain GPY04_RS05190 PF04957 Ribosome modulation factor GPY04_RS05210 PF01170 Putative RNA methylase family UPF0020 GPY04_RS05210 PF10672 S-adenosylmethionine-dependent methyltransferase GPY04_RS05210 PF02926 THUMP domain GPY04_RS05215 PF07126 Cell-division protein ZapC GPY04_RS05220 PF01180 Dihydroorotate dehydrogenase GPY04_RS05225 PF05088 Bacterial NAD-glutamate dehydrogenase GPY04_RS05235 PF01433 Peptidase family M1 domain GPY04_RS05235 PF11940 Domain of unknown function (DUF3458) Ig-like fold GPY04_RS05235 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GPY04_RS05270 PF04055 Radical SAM superfamily GPY04_RS05270 PF13186 Iron-sulfur cluster-binding domain GPY04_RS05350 PF04860 Phage portal protein GPY04_RS05430 PF01712 Deoxynucleoside kinase GPY04_RS05500 PF13408 Recombinase zinc beta ribbon domain GPY04_RS05500 PF00239 Resolvase, N terminal domain GPY04_RS05500 PF07508 Recombinase GPY04_RS05505 PF11940 Domain of unknown function (DUF3458) Ig-like fold GPY04_RS05505 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GPY04_RS05505 PF01433 Peptidase family M1 domain GPY04_RS05515 PF17804 Tail specific protease N-terminal domain GPY04_RS05515 PF03572 Peptidase family S41 GPY04_RS05515 PF00595 PDZ domain GPY04_RS05515 PF11818 C-terminal domain of tail specific protease (DUF3340) GPY04_RS05520 PF04352 ProQ/FINO family GPY04_RS05520 PF17516 ProQ C-terminal domain GPY04_RS05525 PF13185 GAF domain GPY04_RS05530 PF00664 ABC transporter transmembrane region GPY04_RS05530 PF00005 ABC transporter GPY04_RS05535 PF04403 Paraquat-inducible protein A GPY04_RS05540 PF02470 MlaD protein GPY04_RS05545 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF GPY04_RS05545 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF GPY04_RS05545 PF01189 16S rRNA methyltransferase RsmB/F GPY04_RS05550 PF17783 CvfB-like winged helix domain GPY04_RS05550 PF13509 S1 domain GPY04_RS05565 PF00793 DAHP synthetase I family GPY04_RS05570 PF04461 Protein of unknown function (DUF520) GPY04_RS05575 PF02146 Sir2 family GPY04_RS05590 PF13247 4Fe-4S dicluster domain GPY04_RS05595 PF01568 Molydopterin dinucleotide binding domain GPY04_RS05595 PF00384 Molybdopterin oxidoreductase GPY04_RS05595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY04_RS05605 PF02613 Nitrate reductase delta subunit GPY04_RS05625 PF02634 FdhD/NarQ family GPY04_RS05630 PF12848 ABC transporter GPY04_RS05630 PF00005 ABC transporter GPY04_RS05635 PF00989 PAS fold GPY04_RS05635 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS05635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS05640 PF02954 Bacterial regulatory protein, Fis family GPY04_RS05640 PF00072 Response regulator receiver domain GPY04_RS05640 PF00158 Sigma-54 interaction domain GPY04_RS05645 PF12849 PBP superfamily domain GPY04_RS05650 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS05655 PF00005 ABC transporter GPY04_RS05655 PF08402 TOBE domain GPY04_RS05660 PF12804 MobA-like NTP transferase domain GPY04_RS05665 PF00994 Probable molybdopterin binding domain GPY04_RS05665 PF03454 MoeA C-terminal region (domain IV) GPY04_RS05665 PF03453 MoeA N-terminal region (domain I and II) GPY04_RS05690 PF00480 ROK family GPY04_RS05705 PF02743 Cache domain GPY04_RS05705 PF00672 HAMP domain GPY04_RS05705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS05710 PF00877 NlpC/P60 family GPY04_RS05730 PF01554 MatE GPY04_RS05740 PF14743 DNA ligase OB-like domain GPY04_RS05740 PF01068 ATP dependent DNA ligase domain GPY04_RS05750 PF03544 Gram-negative bacterial TonB protein C-terminal GPY04_RS05755 PF02472 Biopolymer transport protein ExbD/TolR GPY04_RS05760 PF01618 MotA/TolQ/ExbB proton channel family GPY04_RS05765 PF01618 MotA/TolQ/ExbB proton channel family GPY04_RS05775 PF13416 Bacterial extracellular solute-binding protein GPY04_RS05780 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS05785 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS05790 PF00005 ABC transporter GPY04_RS05790 PF17912 MalK OB fold domain GPY04_RS05795 PF08220 DeoR-like helix-turn-helix domain GPY04_RS05795 PF00455 DeoR C terminal sensor domain GPY04_RS05800 PF03009 Glycerophosphoryl diester phosphodiesterase family GPY04_RS05805 PF04074 YhcH/YjgK/YiaL GPY04_RS05810 PF01042 Endoribonuclease L-PSP GPY04_RS05815 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS05820 PF00232 Glycosyl hydrolase family 1 GPY04_RS05825 PF00141 Peroxidase GPY04_RS05830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS05830 PF03466 LysR substrate binding domain GPY04_RS05840 PF00529 HlyD membrane-fusion protein of T1SS GPY04_RS05850 PF00005 ABC transporter GPY04_RS05850 PF02687 FtsX-like permease family GPY04_RS05850 PF12704 MacB-like periplasmic core domain GPY04_RS05855 PF12704 MacB-like periplasmic core domain GPY04_RS05855 PF02687 FtsX-like permease family GPY04_RS05855 PF00005 ABC transporter GPY04_RS05860 PF00005 ABC transporter GPY04_RS05860 PF02687 FtsX-like permease family GPY04_RS05860 PF12704 MacB-like periplasmic core domain GPY04_RS05865 PF02322 Cytochrome bd terminal oxidase subunit II GPY04_RS05870 PF01654 Cytochrome bd terminal oxidase subunit I GPY04_RS05880 PF00206 Lyase GPY04_RS05880 PF10415 Fumarase C C-terminus GPY04_RS05910 PF00501 AMP-binding enzyme GPY04_RS05910 PF13193 AMP-binding enzyme C-terminal domain GPY04_RS05915 PF03466 LysR substrate binding domain GPY04_RS05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS05920 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GPY04_RS05920 PF00361 Proton-conducting membrane transporter GPY04_RS05925 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GPY04_RS05930 PF00080 Copper/zinc superoxide dismutase (SODC) GPY04_RS05940 PF06628 Catalase-related immune-responsive GPY04_RS05940 PF00199 Catalase GPY04_RS05950 PF03466 LysR substrate binding domain GPY04_RS05950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS05955 PF03306 Alpha-acetolactate decarboxylase GPY04_RS05960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY04_RS05960 PF00205 Thiamine pyrophosphate enzyme, central domain GPY04_RS05960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY04_RS05970 PF00563 EAL domain GPY04_RS05970 PF17154 Gammaproteobacterial periplasmic sensor domain GPY04_RS05970 PF00672 HAMP domain GPY04_RS05970 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS05975 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS05980 PF01263 Aldose 1-epimerase GPY04_RS05985 PF08544 GHMP kinases C terminal GPY04_RS05985 PF00288 GHMP kinases N terminal domain GPY04_RS05985 PF10509 Galactokinase galactose-binding signature GPY04_RS05990 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain GPY04_RS05990 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain GPY04_RS05995 PF07690 Major Facilitator Superfamily GPY04_RS06015 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS06015 PF00072 Response regulator receiver domain GPY04_RS06035 PF00072 Response regulator receiver domain GPY04_RS06035 PF01584 CheW-like domain GPY04_RS06045 PF12431 Transcriptional regulator GPY04_RS06045 PF00072 Response regulator receiver domain GPY04_RS06050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS06050 PF00989 PAS fold GPY04_RS06050 PF17203 Single cache domain 3 GPY04_RS06050 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain GPY04_RS06065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY04_RS06085 PF04204 Homoserine O-succinyltransferase GPY04_RS06100 PF05971 RNA methyltransferase GPY04_RS06105 PF01863 Protein of unknown function DUF45 GPY04_RS06115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS06115 PF03466 LysR substrate binding domain GPY04_RS06135 PF02321 Outer membrane efflux protein GPY04_RS06140 PF00691 OmpA family GPY04_RS06140 PF05736 OprF membrane domain GPY04_RS06150 PF03435 Saccharopine dehydrogenase NADP binding domain GPY04_RS06150 PF16653 Saccharopine dehydrogenase C-terminal domain GPY04_RS06155 PF00202 Aminotransferase class-III GPY04_RS06160 PF06965 Na+/H+ antiporter 1 GPY04_RS06175 PF00005 ABC transporter GPY04_RS06180 PF01554 MatE GPY04_RS06185 PF13460 NAD(P)H-binding GPY04_RS06185 PF11066 Protein of unknown function (DUF2867) GPY04_RS06195 PF07690 Major Facilitator Superfamily GPY04_RS06200 PF00849 RNA pseudouridylate synthase GPY04_RS06200 PF01479 S4 domain GPY04_RS06205 PF04851 Type III restriction enzyme, res subunit GPY04_RS06205 PF00271 Helicase conserved C-terminal domain GPY04_RS06215 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS06215 PF00072 Response regulator receiver domain GPY04_RS06225 PF01386 Ribosomal L25p family GPY04_RS06230 PF00360 Phytochrome region GPY04_RS06230 PF01590 GAF domain GPY04_RS06230 PF00563 EAL domain GPY04_RS06230 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS06240 PF12729 Four helix bundle sensory module for signal transduction GPY04_RS06240 PF00672 HAMP domain GPY04_RS06240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS06260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY04_RS06260 PF12793 Sugar transport-related sRNA regulator N-term GPY04_RS06270 PF08453 Peptidase family M9 N-terminal GPY04_RS06270 PF01752 Collagenase GPY04_RS06270 PF04151 Bacterial pre-peptidase C-terminal domain GPY04_RS06280 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS06280 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS06280 PF00563 EAL domain GPY04_RS06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS06285 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS06285 PF09308 LuxQ, periplasmic GPY04_RS06285 PF00072 Response regulator receiver domain GPY04_RS06290 PF00571 CBS domain GPY04_RS06290 PF01769 Divalent cation transporter GPY04_RS06290 PF03448 MgtE intracellular N domain GPY04_RS06300 PF03222 Tryptophan/tyrosine permease family GPY04_RS06305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY04_RS06310 PF00005 ABC transporter GPY04_RS06325 PF06945 Protein of unknown function (DUF1289) GPY04_RS06335 PF13416 Bacterial extracellular solute-binding protein GPY04_RS06340 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS06345 PF00005 ABC transporter GPY04_RS06350 PF01066 CDP-alcohol phosphatidyltransferase GPY04_RS06355 PF00849 RNA pseudouridylate synthase GPY04_RS06360 PF00209 Sodium:neurotransmitter symporter family GPY04_RS06365 PF13396 Phospholipase_D-nuclease N-terminal GPY04_RS06365 PF13091 PLD-like domain GPY04_RS06370 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY04_RS06375 PF03352 Methyladenine glycosylase GPY04_RS06380 PF00873 AcrB/AcrD/AcrF family GPY04_RS06385 PF13533 Biotin-lipoyl like GPY04_RS06390 PF00529 HlyD membrane-fusion protein of T1SS GPY04_RS06390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY04_RS06405 PF04012 PspA/IM30 family GPY04_RS06410 PF02954 Bacterial regulatory protein, Fis family GPY04_RS06410 PF00158 Sigma-54 interaction domain GPY04_RS06415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY04_RS06420 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS06425 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS06425 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY04_RS06430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY04_RS06430 PF00005 ABC transporter GPY04_RS06435 PF00005 ABC transporter GPY04_RS06450 PF01368 DHH family GPY04_RS06450 PF02833 DHHA2 domain GPY04_RS06470 PF00384 Molybdopterin oxidoreductase GPY04_RS06470 PF18364 Molybdopterin oxidoreductase N-terminal domain GPY04_RS06470 PF01568 Molydopterin dinucleotide binding domain GPY04_RS06475 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY04_RS06480 PF06796 Periplasmic nitrate reductase protein NapE GPY04_RS06490 PF01226 Formate/nitrite transporter GPY04_RS06500 PF01370 NAD dependent epimerase/dehydratase family GPY04_RS06505 PF02698 DUF218 domain GPY04_RS06515 PF04279 Intracellular septation protein A GPY04_RS06520 PF03061 Thioesterase superfamily GPY04_RS06525 PF03795 YCII-related domain GPY04_RS06535 PF08267 Cobalamin-independent synthase, N-terminal domain GPY04_RS06535 PF01717 Cobalamin-independent synthase, Catalytic domain GPY04_RS06540 PF03466 LysR substrate binding domain GPY04_RS06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS06555 PF05193 Peptidase M16 inactive domain GPY04_RS06555 PF00675 Insulinase (Peptidase family M16) GPY04_RS06560 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS06560 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS06560 PF00563 EAL domain GPY04_RS06565 PF08497 Radical SAM N-terminal GPY04_RS06565 PF11842 Domain of unknown function (DUF3362) GPY04_RS06565 PF04055 Radical SAM superfamily GPY04_RS06570 PF01810 LysE type translocator GPY04_RS06575 PF01037 Lrp/AsnC ligand binding domain GPY04_RS06580 PF04310 MukB N-terminal GPY04_RS06580 PF16330 MukB hinge domain GPY04_RS06585 PF04288 MukE-like family GPY04_RS06590 PF17193 MukF C-terminal domain GPY04_RS06590 PF17192 MukF middle domain GPY04_RS06590 PF03882 MukF winged-helix domain GPY04_RS06600 PF02698 DUF218 domain GPY04_RS06605 PF00072 Response regulator receiver domain GPY04_RS06605 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS06610 PF02613 Nitrate reductase delta subunit GPY04_RS06615 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS06620 PF04994 TfoX C-terminal domain GPY04_RS06620 PF04993 TfoX N-terminal domain GPY04_RS06640 PF00534 Glycosyl transferases group 1 GPY04_RS06640 PF08323 Starch synthase catalytic domain GPY04_RS06645 PF00483 Nucleotidyl transferase GPY04_RS06650 PF01396 Topoisomerase DNA binding C4 zinc finger GPY04_RS06650 PF01751 Toprim domain GPY04_RS06650 PF01131 DNA topoisomerase GPY04_RS06650 PF08272 Topoisomerase I zinc-ribbon-like GPY04_RS06655 PF10692 Protein of unknown function (DUF2498) GPY04_RS06660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GPY04_RS06670 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GPY04_RS06675 PF04377 Arginine-tRNA-protein transferase, C terminus GPY04_RS06675 PF04376 Arginine-tRNA-protein transferase, N terminus GPY04_RS06680 PF01176 Translation initiation factor 1A / IF-1 GPY04_RS06685 PF07055 Enoyl reductase FAD binding domain GPY04_RS06685 PF12241 Trans-2-enoyl-CoA reductase catalytic region GPY04_RS06685 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GPY04_RS06690 PF09317 Domain of unknown function (DUF1974) GPY04_RS06690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY04_RS06690 PF02770 Acyl-CoA dehydrogenase, middle domain GPY04_RS06690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY04_RS06695 PF00440 Bacterial regulatory proteins, tetR family GPY04_RS06695 PF16295 Tetracyclin repressor-like, C-terminal domain GPY04_RS06705 PF07383 Protein of unknown function (DUF1496) GPY04_RS06710 PF00171 Aldehyde dehydrogenase family GPY04_RS06715 PF00440 Bacterial regulatory proteins, tetR family GPY04_RS06715 PF08362 YcdC-like protein, C-terminal region GPY04_RS06735 PF05552 Conserved TM helix GPY04_RS06735 PF00924 Mechanosensitive ion channel GPY04_RS06740 PF04403 Paraquat-inducible protein A GPY04_RS06745 PF02470 MlaD protein GPY04_RS06755 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY04_RS06760 PF00873 AcrB/AcrD/AcrF family GPY04_RS06770 PF00589 Phage integrase family GPY04_RS06770 PF13356 Arm DNA-binding domain GPY04_RS06775 PF13356 Arm DNA-binding domain GPY04_RS06775 PF00589 Phage integrase family GPY04_RS06780 PF12419 SNF2 Helicase protein GPY04_RS06780 PF00271 Helicase conserved C-terminal domain GPY04_RS06780 PF00176 SNF2 family N-terminal domain GPY04_RS06800 PF11867 Domain of unknown function (DUF3387) GPY04_RS06800 PF18766 SWI2/SNF2 ATPase GPY04_RS06800 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) GPY04_RS06820 PF02384 N-6 DNA Methylase GPY04_RS06840 PF07646 Kelch motif GPY04_RS06845 PF01344 Kelch motif GPY04_RS06850 PF01418 Helix-turn-helix domain, rpiR family GPY04_RS06850 PF01380 SIS domain GPY04_RS06855 PF00701 Dihydrodipicolinate synthetase family GPY04_RS06860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY04_RS06865 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GPY04_RS06870 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY04_RS06880 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase GPY04_RS06885 PF00480 ROK family GPY04_RS06890 PF01979 Amidohydrolase family GPY04_RS06895 PF13088 BNR repeat-like domain GPY04_RS06895 PF09264 Vibrio cholerae sialidase, lectin insertion GPY04_RS06905 PF04002 RadC-like JAB domain GPY04_RS06960 PF00005 ABC transporter GPY04_RS07040 PF00875 DNA photolyase GPY04_RS07040 PF03441 FAD binding domain of DNA photolyase GPY04_RS07050 PF09905 DNA-binding protein VF530 GPY04_RS07055 PF00158 Sigma-54 interaction domain GPY04_RS07055 PF01590 GAF domain GPY04_RS07055 PF02954 Bacterial regulatory protein, Fis family GPY04_RS07060 PF00171 Aldehyde dehydrogenase family GPY04_RS07080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY04_RS07090 PF12833 Helix-turn-helix domain GPY04_RS07095 PF02378 Phosphotransferase system, EIIC GPY04_RS07095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY04_RS07095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY04_RS07100 PF01238 Phosphomannose isomerase type I GPY04_RS07105 PF06610 L-alanine exporter GPY04_RS07110 PF00072 Response regulator receiver domain GPY04_RS07110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS07110 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS07110 PF09308 LuxQ, periplasmic GPY04_RS07120 PF02445 Quinolinate synthetase A protein GPY04_RS07130 PF00691 OmpA family GPY04_RS07135 PF04052 TolB amino-terminal domain GPY04_RS07135 PF07676 WD40-like Beta Propeller Repeat GPY04_RS07145 PF02472 Biopolymer transport protein ExbD/TolR GPY04_RS07150 PF01618 MotA/TolQ/ExbB proton channel family GPY04_RS07155 PF03061 Thioesterase superfamily GPY04_RS07160 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) GPY04_RS07165 PF08173 Membrane bound YbgT-like protein GPY04_RS07170 PF02322 Cytochrome bd terminal oxidase subunit II GPY04_RS07175 PF01654 Cytochrome bd terminal oxidase subunit I GPY04_RS07180 PF17864 RuvB AAA lid domain GPY04_RS07180 PF05491 RuvB C-terminal winged helix domain GPY04_RS07180 PF05496 Holliday junction DNA helicase RuvB P-loop domain GPY04_RS07185 PF01330 RuvA N terminal domain GPY04_RS07185 PF07499 RuvA, C-terminal domain GPY04_RS07190 PF02075 Crossover junction endodeoxyribonuclease RuvC GPY04_RS07195 PF09190 DALR domain GPY04_RS07195 PF01406 tRNA synthetases class I (C) catalytic domain GPY04_RS07200 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GPY04_RS07205 PF00149 Calcineurin-like phosphoesterase GPY04_RS07210 PF08668 HDOD domain GPY04_RS07210 PF00563 EAL domain GPY04_RS07215 PF02810 SEC-C motif GPY04_RS07220 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GPY04_RS07225 PF13609 Gram-negative porin GPY04_RS07230 PF13307 Helicase C-terminal domain GPY04_RS07230 PF06733 DEAD_2 GPY04_RS07235 PF01925 Sulfite exporter TauE/SafE GPY04_RS07240 PF07445 Primosomal replication protein priC GPY04_RS07245 PF10689 Protein of unknown function (DUF2496) GPY04_RS07250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS07250 PF00672 HAMP domain GPY04_RS07255 PF03372 Endonuclease/Exonuclease/phosphatase family GPY04_RS07260 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS07265 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS07270 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY04_RS07275 PF00005 ABC transporter GPY04_RS07285 PF02901 Pyruvate formate lyase-like GPY04_RS07285 PF01228 Glycine radical GPY04_RS07295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS07295 PF00672 HAMP domain GPY04_RS07295 PF02743 Cache domain GPY04_RS07300 PF04055 Radical SAM superfamily GPY04_RS07310 PF03887 YfbU domain GPY04_RS07315 PF08298 PrkA AAA domain GPY04_RS07315 PF06798 PrkA serine protein kinase C-terminal domain GPY04_RS07320 PF04285 Protein of unknown function (DUF444) GPY04_RS07325 PF04293 SpoVR like protein GPY04_RS07330 PF02348 Cytidylyltransferase GPY04_RS07335 PF03966 Trm112p-like protein GPY04_RS07340 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GPY04_RS07345 PF00005 ABC transporter GPY04_RS07345 PF00664 ABC transporter transmembrane region GPY04_RS07350 PF03772 Competence protein GPY04_RS07350 PF00753 Metallo-beta-lactamase superfamily GPY04_RS07350 PF13567 Domain of unknown function (DUF4131) GPY04_RS07365 PF02687 FtsX-like permease family GPY04_RS07365 PF12704 MacB-like periplasmic core domain GPY04_RS07370 PF00005 ABC transporter GPY04_RS07375 PF02687 FtsX-like permease family GPY04_RS07375 PF12704 MacB-like periplasmic core domain GPY04_RS07385 PF03461 TRCF domain GPY04_RS07385 PF17757 UvrB interaction domain GPY04_RS07385 PF02559 CarD-like/TRCF domain GPY04_RS07385 PF00270 DEAD/DEAH box helicase GPY04_RS07385 PF00271 Helicase conserved C-terminal domain GPY04_RS07395 PF12563 Hemolytic toxin N terminal GPY04_RS07395 PF07968 Leukocidin/Hemolysin toxin family GPY04_RS07395 PF16458 Beta-prism lectin GPY04_RS07405 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS07410 PF05728 Uncharacterised protein family (UPF0227) GPY04_RS07420 PF13036 Peptidoglycan-synthase activator LpoB GPY04_RS07420 PF08139 Prokaryotic membrane lipoprotein lipid attachment site GPY04_RS07435 PF01230 HIT domain GPY04_RS07440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS07440 PF00672 HAMP domain GPY04_RS07450 PF07840 FadR C-terminal domain GPY04_RS07450 PF00392 Bacterial regulatory proteins, gntR family GPY04_RS07455 PF06450 Bacterial Na+/H+ antiporter B (NhaB) GPY04_RS07460 PF02600 Disulfide bond formation protein DsbB GPY04_RS07465 PF01580 FtsK/SpoIIIE family GPY04_RS07465 PF09397 Ftsk gamma domain GPY04_RS07465 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GPY04_RS07465 PF17854 FtsK alpha domain GPY04_RS07475 PF01037 Lrp/AsnC ligand binding domain GPY04_RS07480 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GPY04_RS07480 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GPY04_RS07490 PF03466 LysR substrate binding domain GPY04_RS07490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS07500 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GPY04_RS07505 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GPY04_RS07510 PF18073 Rubredoxin metal binding domain GPY04_RS07515 PF06305 Lipopolysaccharide assembly protein A domain GPY04_RS07520 PF00216 Bacterial DNA-binding protein GPY04_RS07525 PF00575 S1 RNA binding domain GPY04_RS07530 PF02224 Cytidylate kinase GPY04_RS07540 PF13145 PPIC-type PPIASE domain GPY04_RS07545 PF00216 Bacterial DNA-binding protein GPY04_RS07550 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY04_RS07550 PF02190 ATP-dependent protease La (LON) substrate-binding domain GPY04_RS07550 PF00004 ATPase family associated with various cellular activities (AAA) GPY04_RS07555 PF06689 ClpX C4-type zinc finger GPY04_RS07555 PF10431 C-terminal, D2-small domain, of ClpB protein GPY04_RS07555 PF07724 AAA domain (Cdc48 subfamily) GPY04_RS07560 PF00574 Clp protease GPY04_RS07565 PF05698 Bacterial trigger factor protein (TF) C-terminus GPY04_RS07565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY04_RS07565 PF05697 Bacterial trigger factor protein (TF) GPY04_RS07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS07575 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS07575 PF02743 Cache domain GPY04_RS07580 PF02954 Bacterial regulatory protein, Fis family GPY04_RS07580 PF00158 Sigma-54 interaction domain GPY04_RS07580 PF00072 Response regulator receiver domain GPY04_RS07585 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component GPY04_RS07590 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component GPY04_RS07595 PF03480 Bacterial extracellular solute-binding protein, family 7 GPY04_RS07600 PF02696 Uncharacterized ACR, YdiU/UPF0061 family GPY04_RS07615 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS07615 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS07615 PF13188 PAS domain GPY04_RS07615 PF00563 EAL domain GPY04_RS07660 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GPY04_RS07660 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GPY04_RS07665 PF02668 Taurine catabolism dioxygenase TauD, TfdA family GPY04_RS07670 PF01494 FAD binding domain GPY04_RS07675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS07675 PF03466 LysR substrate binding domain GPY04_RS07690 PF00384 Molybdopterin oxidoreductase GPY04_RS07690 PF18364 Molybdopterin oxidoreductase N-terminal domain GPY04_RS07690 PF01568 Molydopterin dinucleotide binding domain GPY04_RS07695 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY04_RS07700 PF00704 Glycosyl hydrolases family 18 GPY04_RS07705 PF07670 Nucleoside recognition GPY04_RS07705 PF07662 Na+ dependent nucleoside transporter C-terminus GPY04_RS07705 PF01773 Na+ dependent nucleoside transporter N-terminus GPY04_RS07710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS07710 PF03466 LysR substrate binding domain GPY04_RS07715 PF13406 Transglycosylase SLT domain GPY04_RS07720 PF05166 YcgL domain GPY04_RS07725 PF05209 Septum formation inhibitor MinC, N-terminal domain GPY04_RS07725 PF03775 Septum formation inhibitor MinC, C-terminal domain GPY04_RS07730 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GPY04_RS07735 PF03776 Septum formation topological specificity factor MinE GPY04_RS07740 PF04170 NlpE N-terminal domain GPY04_RS07760 PF07690 Major Facilitator Superfamily GPY04_RS07765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS07765 PF00672 HAMP domain GPY04_RS07765 PF12729 Four helix bundle sensory module for signal transduction GPY04_RS07770 PF07883 Cupin domain GPY04_RS07770 PF01381 Helix-turn-helix GPY04_RS07775 PF03594 Benzoate membrane transport protein GPY04_RS07780 PF13193 AMP-binding enzyme C-terminal domain GPY04_RS07780 PF00501 AMP-binding enzyme GPY04_RS07785 PF13378 Enolase C-terminal domain-like GPY04_RS07790 PF00378 Enoyl-CoA hydratase/isomerase GPY04_RS07795 PF12697 Alpha/beta hydrolase family GPY04_RS07800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY04_RS07800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY04_RS07800 PF16582 Middle domain of thiamine pyrophosphate GPY04_RS07805 PF00425 chorismate binding enzyme GPY04_RS07810 PF00155 Aminotransferase class I and II GPY04_RS07820 PF13286 Phosphohydrolase-associated domain GPY04_RS07820 PF01966 HD domain GPY04_RS07840 PF01612 3'-5' exonuclease GPY04_RS07840 PF00570 HRDC domain GPY04_RS07845 PF13193 AMP-binding enzyme C-terminal domain GPY04_RS07845 PF00501 AMP-binding enzyme GPY04_RS07850 PF00561 alpha/beta hydrolase fold GPY04_RS07865 PF00814 Glycoprotease family GPY04_RS07870 PF04851 Type III restriction enzyme, res subunit GPY04_RS07870 PF13307 Helicase C-terminal domain GPY04_RS07880 PF01842 ACT domain GPY04_RS07880 PF00551 Formyl transferase GPY04_RS07885 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS07885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY04_RS07890 PF01343 Peptidase family S49 GPY04_RS07895 PF17763 Glutaminase/Asparaginase C-terminal domain GPY04_RS07895 PF00710 Asparaginase, N-terminal GPY04_RS07900 PF07023 Protein of unknown function (DUF1315) GPY04_RS07910 PF01641 SelR domain GPY04_RS07915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY04_RS07915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY04_RS07920 PF01263 Aldose 1-epimerase GPY04_RS07930 PF13847 Methyltransferase domain GPY04_RS07945 PF00072 Response regulator receiver domain GPY04_RS07945 PF01584 CheW-like domain GPY04_RS07950 PF00480 ROK family GPY04_RS07955 PF00224 Pyruvate kinase, barrel domain GPY04_RS07955 PF02887 Pyruvate kinase, alpha/beta domain GPY04_RS07960 PF01734 Patatin-like phospholipase GPY04_RS07975 PF00209 Sodium:neurotransmitter symporter family GPY04_RS07985 PF02378 Phosphotransferase system, EIIC GPY04_RS07985 PF00367 phosphotransferase system, EIIB GPY04_RS07990 PF01026 TatD related DNase GPY04_RS07995 PF09115 DNA polymerase III, delta subunit, C terminal GPY04_RS08000 PF02223 Thymidylate kinase GPY04_RS08005 PF02618 YceG-like family GPY04_RS08010 PF01063 Amino-transferase class IV GPY04_RS08015 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY04_RS08015 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY04_RS08020 PF00550 Phosphopantetheine attachment site GPY04_RS08030 PF00698 Acyl transferase domain GPY04_RS08035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GPY04_RS08035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GPY04_RS08040 PF02504 Fatty acid synthesis protein GPY04_RS08045 PF01783 Ribosomal L32p protein family GPY04_RS08050 PF02620 Large ribosomal RNA subunit accumulation protein YceD GPY04_RS08055 PF02545 Maf-like protein GPY04_RS08060 PF01479 S4 domain GPY04_RS08060 PF00849 RNA pseudouridylate synthase GPY04_RS08065 PF10150 Ribonuclease E/G family GPY04_RS08065 PF12111 Polyribonucleotide phosphorylase C terminal GPY04_RS08065 PF00575 S1 RNA binding domain GPY04_RS08070 PF00916 Sulfate permease family GPY04_RS08070 PF01740 STAS domain GPY04_RS08080 PF00465 Iron-containing alcohol dehydrogenase GPY04_RS08080 PF00171 Aldehyde dehydrogenase family GPY04_RS08085 PF01914 MarC family integral membrane protein GPY04_RS08090 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY04_RS08090 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY04_RS08095 PF03553 Na+/H+ antiporter family GPY04_RS08105 PF04245 37-kD nucleoid-associated bacterial protein GPY04_RS08110 PF07208 Protein of unknown function (DUF1414) GPY04_RS08115 PF11893 Domain of unknown function (DUF3413) GPY04_RS08115 PF00884 Sulfatase GPY04_RS08130 PF00850 Histone deacetylase domain GPY04_RS08135 PF01751 Toprim domain GPY04_RS08135 PF01131 DNA topoisomerase GPY04_RS08140 PF00462 Glutaredoxin GPY04_RS08145 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GPY04_RS08145 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GPY04_RS08160 PF04333 MlaA lipoprotein GPY04_RS08170 PF03918 Cytochrome C biogenesis protein GPY04_RS08175 PF08534 Redoxin GPY04_RS08180 PF01578 Cytochrome C assembly protein GPY04_RS08180 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GPY04_RS08185 PF03100 CcmE GPY04_RS08190 PF04995 Heme exporter protein D (CcmD) GPY04_RS08195 PF01578 Cytochrome C assembly protein GPY04_RS08200 PF03379 CcmB protein GPY04_RS08205 PF00005 ABC transporter GPY04_RS08215 PF01584 CheW-like domain GPY04_RS08225 PF13614 AAA domain GPY04_RS08230 PF01339 CheB methylesterase GPY04_RS08230 PF00072 Response regulator receiver domain GPY04_RS08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS08235 PF01627 Hpt domain GPY04_RS08235 PF07194 P2 response regulator binding domain GPY04_RS08235 PF02895 Signal transducing histidine kinase, homodimeric domain GPY04_RS08235 PF01584 CheW-like domain GPY04_RS08240 PF04344 Chemotaxis phosphatase, CheZ GPY04_RS08245 PF00072 Response regulator receiver domain GPY04_RS08250 PF04545 Sigma-70, region 4 GPY04_RS08250 PF04539 Sigma-70 region 3 GPY04_RS08250 PF04542 Sigma-70 region 2 GPY04_RS08255 PF10609 NUBPL iron-transfer P-loop NTPase GPY04_RS08260 PF00448 SRP54-type protein, GTPase domain GPY04_RS08265 PF00771 FHIPEP family GPY04_RS08270 PF00300 Histidine phosphatase superfamily (branch 1) GPY04_RS08275 PF00675 Insulinase (Peptidase family M16) GPY04_RS08275 PF05193 Peptidase M16 inactive domain GPY04_RS08285 PF00750 tRNA synthetases class I (R) GPY04_RS08285 PF03485 Arginyl tRNA synthetase N terminal domain GPY04_RS08285 PF05746 DALR anticodon binding domain GPY04_RS08300 PF07664 Ferrous iron transport protein B C terminus GPY04_RS08300 PF02421 Ferrous iron transport protein B GPY04_RS08300 PF07670 Nucleoside recognition GPY04_RS08305 PF04023 FeoA domain GPY04_RS08310 PF12833 Helix-turn-helix domain GPY04_RS08310 PF02311 AraC-like ligand binding domain GPY04_RS08315 PF01297 Zinc-uptake complex component A periplasmic GPY04_RS08320 PF00005 ABC transporter GPY04_RS08325 PF00950 ABC 3 transport family GPY04_RS08330 PF00549 CoA-ligase GPY04_RS08330 PF02629 CoA binding domain GPY04_RS08335 PF08442 ATP-grasp domain GPY04_RS08335 PF00549 CoA-ligase GPY04_RS08340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY04_RS08340 PF02817 e3 binding domain GPY04_RS08340 PF00364 Biotin-requiring enzyme GPY04_RS08345 PF00676 Dehydrogenase E1 component GPY04_RS08345 PF02779 Transketolase, pyrimidine binding domain GPY04_RS08345 PF16870 2-oxoglutarate dehydrogenase C-terminal GPY04_RS08345 PF16078 2-oxoglutarate dehydrogenase N-terminus GPY04_RS08350 PF13085 2Fe-2S iron-sulfur cluster binding domain GPY04_RS08355 PF00890 FAD binding domain GPY04_RS08355 PF02910 Fumarate reductase flavoprotein C-term GPY04_RS08360 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GPY04_RS08365 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GPY04_RS08370 PF00285 Citrate synthase, C-terminal domain GPY04_RS08375 PF01784 NIF3 (NGG1p interacting factor 3) GPY04_RS08385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY04_RS08385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY04_RS08385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY04_RS08385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY04_RS08390 PF03925 SeqA protein C-terminal domain GPY04_RS08390 PF17206 SeqA protein N-terminal domain GPY04_RS08395 PF12697 Alpha/beta hydrolase family GPY04_RS08405 PF00258 Flavodoxin GPY04_RS08410 PF04172 LrgB-like family GPY04_RS08415 PF03788 LrgA family GPY04_RS08420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS08420 PF03466 LysR substrate binding domain GPY04_RS08430 PF01475 Ferric uptake regulator family GPY04_RS08435 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY04_RS08435 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY04_RS08440 PF11890 Domain of unknown function (DUF3410) GPY04_RS08440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY04_RS08440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY04_RS08445 PF00109 Beta-ketoacyl synthase, N-terminal domain GPY04_RS08445 PF02801 Beta-ketoacyl synthase, C-terminal domain GPY04_RS08450 PF01266 FAD dependent oxidoreductase GPY04_RS08450 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GPY04_RS08455 PF03358 NADPH-dependent FMN reductase GPY04_RS08460 PF08891 YfcL protein GPY04_RS08465 PF04315 Elongation factor P hydroxylase GPY04_RS08470 PF03458 UPF0126 domain GPY04_RS08475 PF01264 Chorismate synthase GPY04_RS08480 PF05175 Methyltransferase small domain GPY04_RS08485 PF01713 Smr domain GPY04_RS08490 PF01312 FlhB HrpN YscU SpaS Family GPY04_RS08495 PF01311 Bacterial export proteins, family 1 GPY04_RS08500 PF01313 Bacterial export proteins, family 3 GPY04_RS08505 PF00813 FliP family GPY04_RS08510 PF04347 Flagellar biosynthesis protein, FliO GPY04_RS08515 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY04_RS08520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GPY04_RS08520 PF02154 Flagellar motor switch protein FliM GPY04_RS08525 PF03748 Flagellar basal body-associated protein FliL GPY04_RS08545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY04_RS08545 PF18269 T3SS EscN ATPase C-terminal domain GPY04_RS08550 PF02108 Flagellar assembly protein FliH GPY04_RS08555 PF14841 FliG middle domain GPY04_RS08555 PF01706 FliG C-terminal domain GPY04_RS08555 PF14842 FliG N-terminal domain GPY04_RS08560 PF08345 Flagellar M-ring protein C-terminal GPY04_RS08560 PF01514 Secretory protein of YscJ/FliF family GPY04_RS08565 PF02049 Flagellar hook-basal body complex protein FliE GPY04_RS08570 PF02954 Bacterial regulatory protein, Fis family GPY04_RS08570 PF00158 Sigma-54 interaction domain GPY04_RS08570 PF00072 Response regulator receiver domain GPY04_RS08575 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS08575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS08575 PF13493 Domain of unknown function (DUF4118) GPY04_RS08575 PF08447 PAS fold GPY04_RS08575 PF00989 PAS fold GPY04_RS08575 PF13426 PAS domain GPY04_RS08580 PF00158 Sigma-54 interaction domain GPY04_RS08580 PF02954 Bacterial regulatory protein, Fis family GPY04_RS08580 PF00072 Response regulator receiver domain GPY04_RS08585 PF02561 Flagellar protein FliS GPY04_RS08595 PF07196 Flagellin hook IN motif GPY04_RS08595 PF02465 Flagellar hook-associated protein 2 N-terminus GPY04_RS08595 PF07195 Flagellar hook-associated protein 2 C-terminus GPY04_RS08600 PF03646 FlaG protein GPY04_RS08605 PF00700 Bacterial flagellin C-terminal helical region GPY04_RS08605 PF07196 Flagellin hook IN motif GPY04_RS08605 PF00669 Bacterial flagellin N-terminal helical region GPY04_RS08610 PF00700 Bacterial flagellin C-terminal helical region GPY04_RS08610 PF07196 Flagellin hook IN motif GPY04_RS08610 PF00669 Bacterial flagellin N-terminal helical region GPY04_RS08615 PF00669 Bacterial flagellin N-terminal helical region GPY04_RS08615 PF07196 Flagellin hook IN motif GPY04_RS08615 PF00700 Bacterial flagellin C-terminal helical region GPY04_RS08620 PF04261 Dyp-type peroxidase family GPY04_RS08625 PF11143 Protein of unknown function (DUF2919) GPY04_RS08640 PF03960 ArsC family GPY04_RS08645 PF01546 Peptidase family M20/M25/M40 GPY04_RS08645 PF07687 Peptidase dimerisation domain GPY04_RS08650 PF02557 D-alanyl-D-alanine carboxypeptidase GPY04_RS08660 PF06804 NlpB/DapX lipoprotein GPY04_RS08665 PF00701 Dihydrodipicolinate synthetase family GPY04_RS08675 PF00578 AhpC/TSA family GPY04_RS08680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS08680 PF00672 HAMP domain GPY04_RS08680 PF02743 Cache domain GPY04_RS08685 PF01594 AI-2E family transporter GPY04_RS08695 PF01435 Peptidase family M48 GPY04_RS08695 PF13181 Tetratricopeptide repeat GPY04_RS08700 PF03960 ArsC family GPY04_RS08705 PF03358 NADPH-dependent FMN reductase GPY04_RS08720 PF00860 Permease family GPY04_RS08725 PF04073 Aminoacyl-tRNA editing domain GPY04_RS08730 PF02872 5'-nucleotidase, C-terminal domain GPY04_RS08730 PF00149 Calcineurin-like phosphoesterase GPY04_RS08735 PF00793 DAHP synthetase I family GPY04_RS08740 PF13369 Transglutaminase-like superfamily GPY04_RS08745 PF04247 Invasion gene expression up-regulator, SirB GPY04_RS08750 PF17827 PrmC N-terminal domain GPY04_RS08750 PF13847 Methyltransferase domain GPY04_RS08755 PF03462 PCRF domain GPY04_RS08755 PF00472 RF-1 domain GPY04_RS08760 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GPY04_RS08760 PF01488 Shikimate / quinate 5-dehydrogenase GPY04_RS08760 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GPY04_RS08765 PF03550 Outer membrane lipoprotein LolB GPY04_RS08770 PF08544 GHMP kinases C terminal GPY04_RS08770 PF00288 GHMP kinases N terminal domain GPY04_RS08775 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GPY04_RS08775 PF14572 Phosphoribosyl synthetase-associated domain GPY04_RS08780 PF01195 Peptidyl-tRNA hydrolase GPY04_RS08785 PF01926 50S ribosome-binding GTPase GPY04_RS08785 PF06071 Protein of unknown function (DUF933) GPY04_RS08870 PF07196 Flagellin hook IN motif GPY04_RS08870 PF00700 Bacterial flagellin C-terminal helical region GPY04_RS08870 PF00669 Bacterial flagellin N-terminal helical region GPY04_RS08875 PF00700 Bacterial flagellin C-terminal helical region GPY04_RS08875 PF07196 Flagellin hook IN motif GPY04_RS08875 PF00669 Bacterial flagellin N-terminal helical region GPY04_RS08890 PF07196 Flagellin hook IN motif GPY04_RS08890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY04_RS08895 PF10135 Rod binding protein GPY04_RS08895 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GPY04_RS08900 PF02119 Flagellar P-ring protein GPY04_RS08905 PF02107 Flagellar L-ring protein GPY04_RS08910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY04_RS08910 PF00460 Flagella basal body rod protein GPY04_RS08915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY04_RS08915 PF00460 Flagella basal body rod protein GPY04_RS08920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY04_RS08920 PF07559 Flagellar basal body protein FlaE GPY04_RS08920 PF00460 Flagella basal body rod protein GPY04_RS08925 PF13861 FlgD Tudor-like domain GPY04_RS08925 PF13860 FlgD Ig-like domain GPY04_RS08925 PF03963 Flagellar hook capping protein - N-terminal region GPY04_RS08930 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GPY04_RS08930 PF00460 Flagella basal body rod protein GPY04_RS08935 PF00460 Flagella basal body rod protein GPY04_RS08940 PF01739 CheR methyltransferase, SAM binding domain GPY04_RS08940 PF03705 CheR methyltransferase, all-alpha domain GPY04_RS08945 PF00072 Response regulator receiver domain GPY04_RS08945 PF01584 CheW-like domain GPY04_RS08980 PF08242 Methyltransferase domain GPY04_RS08980 PF00550 Phosphopantetheine attachment site GPY04_RS08980 PF00501 AMP-binding enzyme GPY04_RS08980 PF00668 Condensation domain GPY04_RS08985 PF04954 Siderophore-interacting protein GPY04_RS08985 PF08021 Siderophore-interacting FAD-binding domain GPY04_RS08990 PF07715 TonB-dependent Receptor Plug Domain GPY04_RS09000 PF01389 OmpA-like transmembrane domain GPY04_RS09000 PF00691 OmpA family GPY04_RS09005 PF00749 tRNA synthetases class I (E and Q), catalytic domain GPY04_RS09010 PF00403 Heavy-metal-associated domain GPY04_RS09020 PF02838 Glycosyl hydrolase family 20, domain 2 GPY04_RS09020 PF00728 Glycosyl hydrolase family 20, catalytic domain GPY04_RS09020 PF03173 Putative carbohydrate binding domain GPY04_RS09020 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain GPY04_RS09025 PF01963 TraB family GPY04_RS09040 PF01713 Smr domain GPY04_RS09045 PF00849 RNA pseudouridylate synthase GPY04_RS09045 PF01479 S4 domain GPY04_RS09050 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS09050 PF08448 PAS fold GPY04_RS09060 PF00586 AIR synthase related protein, N-terminal domain GPY04_RS09060 PF02769 AIR synthase related protein, C-terminal domain GPY04_RS09065 PF00551 Formyl transferase GPY04_RS09070 PF13230 Glutamine amidotransferases class-II GPY04_RS09075 PF13580 SIS domain GPY04_RS09080 PF09317 Domain of unknown function (DUF1974) GPY04_RS09080 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GPY04_RS09080 PF02770 Acyl-CoA dehydrogenase, middle domain GPY04_RS09080 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GPY04_RS09090 PF00929 Exonuclease GPY04_RS09095 PF00075 RNase H GPY04_RS09100 PF08241 Methyltransferase domain GPY04_RS09105 PF16123 Hydroxyacylglutathione hydrolase C-terminus GPY04_RS09105 PF00753 Metallo-beta-lactamase superfamily GPY04_RS09110 PF01476 LysM domain GPY04_RS09110 PF01464 Transglycosylase SLT domain GPY04_RS09115 PF03372 Endonuclease/Exonuclease/phosphatase family GPY04_RS09120 PF00543 Nitrogen regulatory protein P-II GPY04_RS09125 PF05870 Phenolic acid decarboxylase (PAD) GPY04_RS09130 PF00034 Cytochrome c GPY04_RS09135 PF09179 TilS substrate binding domain GPY04_RS09135 PF11734 TilS substrate C-terminal domain GPY04_RS09135 PF01171 PP-loop family GPY04_RS09140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GPY04_RS09145 PF14579 Helix-hairpin-helix motif GPY04_RS09145 PF01336 OB-fold nucleic acid binding domain GPY04_RS09145 PF02811 PHP domain GPY04_RS09145 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GPY04_RS09145 PF07733 Bacterial DNA polymerase III alpha NTPase domain GPY04_RS09150 PF01351 Ribonuclease HII GPY04_RS09155 PF02684 Lipid-A-disaccharide synthetase GPY04_RS09160 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GPY04_RS09160 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS09165 PF07977 FabA-like domain GPY04_RS09170 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GPY04_RS09170 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS09175 PF03938 Outer membrane protein (OmpH-like) GPY04_RS09180 PF01103 Surface antigen GPY04_RS09180 PF07244 Surface antigen variable number repeat GPY04_RS09185 PF02163 Peptidase family M50 GPY04_RS09185 PF17820 PDZ domain GPY04_RS09190 PF13288 DXP reductoisomerase C-terminal domain GPY04_RS09190 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase GPY04_RS09190 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain GPY04_RS09200 PF01255 Putative undecaprenyl diphosphate synthase GPY04_RS09205 PF01765 Ribosome recycling factor GPY04_RS09210 PF00696 Amino acid kinase family GPY04_RS09215 PF00889 Elongation factor TS GPY04_RS09220 PF00318 Ribosomal protein S2 GPY04_RS09225 PF00557 Metallopeptidase family M24 GPY04_RS09230 PF01966 HD domain GPY04_RS09230 PF01909 Nucleotidyltransferase domain GPY04_RS09230 PF08335 GlnD PII-uridylyltransferase GPY04_RS09235 PF11944 Protein of unknown function (DUF3461) GPY04_RS09240 PF04608 Phosphatidylglycerophosphatase A GPY04_RS09245 PF02769 AIR synthase related protein, C-terminal domain GPY04_RS09245 PF00586 AIR synthase related protein, N-terminal domain GPY04_RS09250 PF01029 NusB family GPY04_RS09255 PF00885 6,7-dimethyl-8-ribityllumazine synthase GPY04_RS09260 PF00925 GTP cyclohydrolase II GPY04_RS09260 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GPY04_RS09265 PF00677 Lumazine binding domain GPY04_RS09270 PF01872 RibD C-terminal domain GPY04_RS09270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY04_RS09275 PF03477 ATP cone domain GPY04_RS09280 PF00171 Aldehyde dehydrogenase family GPY04_RS09285 PF01472 PUA domain GPY04_RS09285 PF00696 Amino acid kinase family GPY04_RS09290 PF07417 Sigma factor-binding transcriptional regulator Crl GPY04_RS09300 PF00156 Phosphoribosyl transferase domain GPY04_RS09305 PF00860 Permease family GPY04_RS09310 PF01546 Peptidase family M20/M25/M40 GPY04_RS09310 PF07687 Peptidase dimerisation domain GPY04_RS09315 PF08443 RimK-like ATP-grasp domain GPY04_RS09315 PF18030 RimK PreATP-grasp domain GPY04_RS09320 PF18030 RimK PreATP-grasp domain GPY04_RS09320 PF08443 RimK-like ATP-grasp domain GPY04_RS09330 PF00209 Sodium:neurotransmitter symporter family GPY04_RS09335 PF17158 Membrane-associated sensor, integral membrane domain GPY04_RS09335 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS09345 PF00817 impB/mucB/samB family GPY04_RS09345 PF11798 IMS family HHH motif GPY04_RS09355 PF02424 ApbE family GPY04_RS09360 PF00970 Oxidoreductase FAD-binding domain GPY04_RS09360 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY04_RS09360 PF00175 Oxidoreductase NAD-binding domain GPY04_RS09365 PF02508 Rnf-Nqr subunit, membrane protein GPY04_RS09370 PF02508 Rnf-Nqr subunit, membrane protein GPY04_RS09375 PF04205 FMN-binding domain GPY04_RS09380 PF03116 NQR2, RnfD, RnfE family GPY04_RS09385 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GPY04_RS09385 PF11973 NQRA C-terminal domain GPY04_RS09390 PF01722 BolA-like protein GPY04_RS09395 PF05175 Methyltransferase small domain GPY04_RS09405 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GPY04_RS09415 PF07690 Major Facilitator Superfamily GPY04_RS09425 PF04542 Sigma-70 region 2 GPY04_RS09425 PF04545 Sigma-70, region 4 GPY04_RS09435 PF03502 Nucleoside-specific channel-forming protein, Tsx GPY04_RS09440 PF08546 Ketopantoate reductase PanE/ApbA C terminal GPY04_RS09440 PF02558 Ketopantoate reductase PanE/ApbA GPY04_RS09445 PF01965 DJ-1/PfpI family GPY04_RS09450 PF00266 Aminotransferase class-V GPY04_RS09455 PF02657 Fe-S metabolism associated domain GPY04_RS09460 PF00899 ThiF family GPY04_RS09465 PF06725 3D domain GPY04_RS09465 PF03562 MltA specific insert domain GPY04_RS09475 PF00583 Acetyltransferase (GNAT) family GPY04_RS09475 PF00696 Amino acid kinase family GPY04_RS09485 PF13538 UvrD-like helicase C-terminal domain GPY04_RS09490 PF12705 PD-(D/E)XK nuclease superfamily GPY04_RS09490 PF00580 UvrD/REP helicase N-terminal domain GPY04_RS09490 PF13361 UvrD-like helicase C-terminal domain GPY04_RS09495 PF17946 RecC C-terminal domain GPY04_RS09510 PF07130 YebG protein GPY04_RS09515 PF14602 Hexapeptide repeat of succinyl-transferase GPY04_RS09515 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle GPY04_RS09525 PF00583 Acetyltransferase (GNAT) family GPY04_RS09530 PF18030 RimK PreATP-grasp domain GPY04_RS09530 PF08443 RimK-like ATP-grasp domain GPY04_RS09530 PF02080 TrkA-C domain GPY04_RS09535 PF01544 CorA-like Mg2+ transporter protein GPY04_RS09545 PF01588 Putative tRNA binding domain GPY04_RS09550 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS09555 PF16353 Domain of unknown function(DUF4981) GPY04_RS09555 PF02929 Beta galactosidase small chain GPY04_RS09555 PF02837 Glycosyl hydrolases family 2, sugar binding domain GPY04_RS09555 PF02836 Glycosyl hydrolases family 2, TIM barrel domain GPY04_RS09555 PF00703 Glycosyl hydrolases family 2 GPY04_RS09565 PF00072 Response regulator receiver domain GPY04_RS09570 PF00501 AMP-binding enzyme GPY04_RS09575 PF03144 Elongation factor Tu domain 2 GPY04_RS09575 PF00009 Elongation factor Tu GTP binding domain GPY04_RS09575 PF03764 Elongation factor G, domain IV GPY04_RS09575 PF14492 Elongation Factor G, domain II GPY04_RS09575 PF00679 Elongation factor G C-terminus GPY04_RS09580 PF18073 Rubredoxin metal binding domain GPY04_RS09590 PF18429 Domain of unknown function (DUF5609) GPY04_RS09600 PF01048 Phosphorylase superfamily GPY04_RS09605 PF01676 Metalloenzyme superfamily GPY04_RS09610 PF02885 Glycosyl transferase family, helical bundle domain GPY04_RS09610 PF00591 Glycosyl transferase family, a/b domain GPY04_RS09610 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GPY04_RS09615 PF01791 DeoC/LacD family aldolase GPY04_RS09625 PF01773 Na+ dependent nucleoside transporter N-terminus GPY04_RS09625 PF07670 Nucleoside recognition GPY04_RS09625 PF07662 Na+ dependent nucleoside transporter C-terminus GPY04_RS09630 PF01026 TatD related DNase GPY04_RS09640 PF03883 Peroxide stress protein YaaA GPY04_RS09645 PF01235 Sodium:alanine symporter family GPY04_RS09660 PF03167 Uracil DNA glycosylase superfamily GPY04_RS09665 PF01261 Xylose isomerase-like TIM barrel GPY04_RS09670 PF01228 Glycine radical GPY04_RS09675 PF00291 Pyridoxal-phosphate dependent enzyme GPY04_RS09675 PF14821 Threonine synthase N terminus GPY04_RS09680 PF00288 GHMP kinases N terminal domain GPY04_RS09680 PF08544 GHMP kinases C terminal GPY04_RS09685 PF00696 Amino acid kinase family GPY04_RS09685 PF01842 ACT domain GPY04_RS09685 PF13840 ACT domain GPY04_RS09685 PF00742 Homoserine dehydrogenase GPY04_RS09685 PF03447 Homoserine dehydrogenase, NAD binding domain GPY04_RS09700 PF03737 Aldolase/RraA GPY04_RS09710 PF00072 Response regulator receiver domain GPY04_RS09710 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS09715 PF00072 Response regulator receiver domain GPY04_RS09715 PF00989 PAS fold GPY04_RS09715 PF18415 Histidine kinase receptor ArcB trans-membrane domain GPY04_RS09715 PF01627 Hpt domain GPY04_RS09715 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS09715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS09720 PF00563 EAL domain GPY04_RS09720 PF01590 GAF domain GPY04_RS09720 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS09720 PF00360 Phytochrome region GPY04_RS09725 PF04055 Radical SAM superfamily GPY04_RS09725 PF16199 Radical_SAM C-terminal domain GPY04_RS09730 PF01493 GXGXG motif GPY04_RS09730 PF00310 Glutamine amidotransferases class-II GPY04_RS09730 PF04898 Glutamate synthase central domain GPY04_RS09730 PF01645 Conserved region in glutamate synthase GPY04_RS09735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GPY04_RS09735 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS09740 PF01493 GXGXG motif GPY04_RS09740 PF01645 Conserved region in glutamate synthase GPY04_RS09740 PF04898 Glutamate synthase central domain GPY04_RS09740 PF00310 Glutamine amidotransferases class-II GPY04_RS09745 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS09745 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster GPY04_RS09755 PF01048 Phosphorylase superfamily GPY04_RS09765 PF01497 Periplasmic binding protein GPY04_RS09770 PF03458 UPF0126 domain GPY04_RS09775 PF03466 LysR substrate binding domain GPY04_RS09775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS09780 PF01925 Sulfite exporter TauE/SafE GPY04_RS09785 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GPY04_RS09790 PF00005 ABC transporter GPY04_RS09805 PF02142 MGS-like domain GPY04_RS09805 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GPY04_RS09805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GPY04_RS09810 PF00117 Glutamine amidotransferase class-I GPY04_RS09810 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GPY04_RS09820 PF01113 Dihydrodipicolinate reductase, N-terminus GPY04_RS09820 PF05173 Dihydrodipicolinate reductase, C-terminus GPY04_RS09825 PF00293 NUDIX domain GPY04_RS09830 PF02810 SEC-C motif GPY04_RS09830 PF07516 SecA Wing and Scaffold domain GPY04_RS09830 PF01043 SecA preprotein cross-linking domain GPY04_RS09830 PF07517 SecA DEAD-like domain GPY04_RS09840 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GPY04_RS09845 PF00091 Tubulin/FtsZ family, GTPase domain GPY04_RS09845 PF12327 FtsZ family, C-terminal domain GPY04_RS09850 PF02491 SHS2 domain inserted in FTSA GPY04_RS09855 PF08478 POTRA domain, FtsQ-type GPY04_RS09855 PF03799 Cell division protein FtsQ GPY04_RS09860 PF08245 Mur ligase middle domain GPY04_RS09860 PF02875 Mur ligase family, glutamate ligase domain GPY04_RS09860 PF01225 Mur ligase family, catalytic domain GPY04_RS09865 PF04101 Glycosyltransferase family 28 C-terminal domain GPY04_RS09865 PF03033 Glycosyltransferase family 28 N-terminal domain GPY04_RS09870 PF01098 Cell cycle protein GPY04_RS09875 PF02875 Mur ligase family, glutamate ligase domain GPY04_RS09875 PF08245 Mur ligase middle domain GPY04_RS09880 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GPY04_RS09880 PF00953 Glycosyl transferase family 4 GPY04_RS09885 PF01225 Mur ligase family, catalytic domain GPY04_RS09885 PF02875 Mur ligase family, glutamate ligase domain GPY04_RS09885 PF08245 Mur ligase middle domain GPY04_RS09890 PF08245 Mur ligase middle domain GPY04_RS09890 PF02875 Mur ligase family, glutamate ligase domain GPY04_RS09890 PF01225 Mur ligase family, catalytic domain GPY04_RS09895 PF03717 Penicillin-binding Protein dimerisation domain GPY04_RS09895 PF00905 Penicillin binding protein transpeptidase domain GPY04_RS09900 PF04999 Cell division protein FtsL GPY04_RS09905 PF01795 MraW methylase family GPY04_RS09915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY04_RS09915 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS09920 PF02817 e3 binding domain GPY04_RS09920 PF00364 Biotin-requiring enzyme GPY04_RS09920 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GPY04_RS09925 PF17831 Pyruvate dehydrogenase E1 component middle domain GPY04_RS09925 PF00456 Transketolase, thiamine diphosphate binding domain GPY04_RS09930 PF00392 Bacterial regulatory proteins, gntR family GPY04_RS09930 PF07729 FCD domain GPY04_RS09935 PF00149 Calcineurin-like phosphoesterase GPY04_RS09935 PF02872 5'-nucleotidase, C-terminal domain GPY04_RS09940 PF17768 RecJ OB domain GPY04_RS09940 PF02272 DHHA1 domain GPY04_RS09940 PF01368 DHH family GPY04_RS09945 PF10411 Disulfide bond isomerase protein N-terminus GPY04_RS09945 PF13098 Thioredoxin-like domain GPY04_RS09950 PF00589 Phage integrase family GPY04_RS09950 PF02899 Phage integrase, N-terminal SAM-like domain GPY04_RS09955 PF00258 Flavodoxin GPY04_RS09960 PF01510 N-acetylmuramoyl-L-alanine amidase GPY04_RS09965 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GPY04_RS09965 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GPY04_RS09970 PF00114 Pilin (bacterial filament) GPY04_RS09970 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS09975 PF00437 Type II/IV secretion system protein GPY04_RS09975 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GPY04_RS09980 PF00482 Type II secretion system (T2SS), protein F GPY04_RS09985 PF06750 Bacterial Peptidase A24 N-terminal domain GPY04_RS09985 PF01478 Type IV leader peptidase family GPY04_RS09990 PF01121 Dephospho-CoA kinase GPY04_RS09995 PF07072 Cell division protein GPY04_RS10000 PF03884 DNA gyrase inhibitor YacG GPY04_RS10005 PF00521 DNA gyrase/topoisomerase IV, subunit A GPY04_RS10005 PF03989 DNA gyrase C-terminal domain, beta-propeller GPY04_RS10010 PF01751 Toprim domain GPY04_RS10010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS10010 PF00986 DNA gyrase B subunit, carboxyl terminus GPY04_RS10010 PF00204 DNA gyrase B GPY04_RS10015 PF05728 Uncharacterised protein family (UPF0227) GPY04_RS10020 PF00149 Calcineurin-like phosphoesterase GPY04_RS10025 PF06853 Protein of unknown function (DUF1249) GPY04_RS10030 PF00293 NUDIX domain GPY04_RS10035 PF02321 Outer membrane efflux protein GPY04_RS10040 PF01467 Cytidylyltransferase-like GPY04_RS10040 PF00294 pfkB family carbohydrate kinase GPY04_RS10045 PF08335 GlnD PII-uridylyltransferase GPY04_RS10045 PF03710 Glutamate-ammonia ligase adenylyltransferase GPY04_RS10050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS10050 PF00672 HAMP domain GPY04_RS10050 PF02743 Cache domain GPY04_RS10055 PF01928 CYTH domain GPY04_RS10060 PF01865 Protein of unknown function DUF47 GPY04_RS10065 PF01384 Phosphate transporter family GPY04_RS10070 PF08239 Bacterial SH3 domain GPY04_RS10080 PF13401 AAA domain GPY04_RS10080 PF01471 Putative peptidoglycan binding domain GPY04_RS10085 PF01966 HD domain GPY04_RS10085 PF01743 Poly A polymerase head domain GPY04_RS10085 PF12627 Probable RNA and SrmB- binding site of polymerase A GPY04_RS10090 PF00113 Enolase, C-terminal TIM barrel domain GPY04_RS10090 PF03952 Enolase, N-terminal domain GPY04_RS10095 PF00117 Glutamine amidotransferase class-I GPY04_RS10095 PF06418 CTP synthase N-terminus GPY04_RS10100 PF03819 MazG nucleotide pyrophosphohydrolase domain GPY04_RS10105 PF13291 ACT domain GPY04_RS10105 PF02824 TGS domain GPY04_RS10105 PF04607 Region found in RelA / SpoT proteins GPY04_RS10110 PF05958 tRNA (Uracil-5-)-methyltransferase GPY04_RS10110 PF01938 TRAM domain GPY04_RS10115 PF00072 Response regulator receiver domain GPY04_RS10115 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS10115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS10115 PF00672 HAMP domain GPY04_RS10115 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GPY04_RS10115 PF01627 Hpt domain GPY04_RS10120 PF00563 EAL domain GPY04_RS10120 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS10135 PF01648 4'-phosphopantetheinyl transferase superfamily GPY04_RS10140 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GPY04_RS10145 PF11967 Recombination protein O N terminal GPY04_RS10145 PF02565 Recombination protein O C terminal GPY04_RS10150 PF07650 KH domain GPY04_RS10150 PF01926 50S ribosome-binding GTPase GPY04_RS10155 PF14622 Ribonuclease-III-like GPY04_RS10155 PF00035 Double-stranded RNA binding motif GPY04_RS10160 PF10502 Signal peptidase, peptidase S26 GPY04_RS10165 PF00009 Elongation factor Tu GTP binding domain GPY04_RS10165 PF00679 Elongation factor G C-terminus GPY04_RS10165 PF06421 GTP-binding protein LepA C-terminus GPY04_RS10165 PF03144 Elongation factor Tu domain 2 GPY04_RS10175 PF17188 MucB/RseB C-terminal domain GPY04_RS10175 PF03888 MucB/RseB N-terminal domain GPY04_RS10180 PF03872 Anti sigma-E protein RseA, N-terminal domain GPY04_RS10180 PF03873 Anti sigma-E protein RseA, C-terminal domain GPY04_RS10185 PF04542 Sigma-70 region 2 GPY04_RS10185 PF08281 Sigma-70, region 4 GPY04_RS10190 PF00890 FAD binding domain GPY04_RS10190 PF02910 Fumarate reductase flavoprotein C-term GPY04_RS10200 PF03937 Flavinator of succinate dehydrogenase GPY04_RS10215 PF01494 FAD binding domain GPY04_RS10220 PF01494 FAD binding domain GPY04_RS10225 PF03695 Uncharacterised protein family (UPF0149) GPY04_RS10230 PF05164 Cell division protein ZapA GPY04_RS10240 PF01812 5-formyltetrahydrofolate cyclo-ligase family GPY04_RS10245 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GPY04_RS10250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY04_RS10250 PF01842 ACT domain GPY04_RS10250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY04_RS10255 PF10369 Small subunit of acetolactate synthase GPY04_RS10260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY04_RS10260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY04_RS10260 PF00205 Thiamine pyrophosphate enzyme, central domain GPY04_RS10265 PF00501 AMP-binding enzyme GPY04_RS10270 PF03466 LysR substrate binding domain GPY04_RS10270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS10280 PF01569 PAP2 superfamily GPY04_RS10290 PF08502 LeuA allosteric (dimerisation) domain GPY04_RS10290 PF00682 HMGL-like GPY04_RS10295 PF00180 Isocitrate/isopropylmalate dehydrogenase GPY04_RS10300 PF00330 Aconitase family (aconitate hydratase) GPY04_RS10305 PF00694 Aconitase C-terminal domain GPY04_RS10350 PF00072 Response regulator receiver domain GPY04_RS10365 PF03739 Lipopolysaccharide export system permease LptF/LptG GPY04_RS10370 PF03739 Lipopolysaccharide export system permease LptF/LptG GPY04_RS10375 PF02789 Cytosol aminopeptidase family, N-terminal domain GPY04_RS10375 PF00883 Cytosol aminopeptidase family, catalytic domain GPY04_RS10380 PF04364 DNA polymerase III chi subunit, HolC GPY04_RS10385 PF10458 Valyl tRNA synthetase tRNA binding arm GPY04_RS10385 PF00133 tRNA synthetases class I (I, L, M and V) GPY04_RS10385 PF08264 Anticodon-binding domain of tRNA GPY04_RS10390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY04_RS10390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY04_RS10395 PF00849 RNA pseudouridylate synthase GPY04_RS10400 PF12137 RNA polymerase recycling family C-terminal GPY04_RS10400 PF00271 Helicase conserved C-terminal domain GPY04_RS10400 PF18339 RapA N-terminal Tudor like domain 1 GPY04_RS10400 PF18337 RapA N-terminal Tudor like domain GPY04_RS10400 PF00176 SNF2 family N-terminal domain GPY04_RS10405 PF02562 PhoH-like protein GPY04_RS10405 PF13638 PIN domain GPY04_RS10410 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GPY04_RS10410 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GPY04_RS10415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GPY04_RS10415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GPY04_RS10420 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain GPY04_RS10420 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain GPY04_RS10425 PF01042 Endoribonuclease L-PSP GPY04_RS10430 PF01553 Acyltransferase GPY04_RS10435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GPY04_RS10440 PF01722 BolA-like protein GPY04_RS10450 PF05494 MlaC protein GPY04_RS10455 PF02470 MlaD protein GPY04_RS10460 PF02405 Permease MlaE GPY04_RS10465 PF00005 ABC transporter GPY04_RS10470 PF01699 Sodium/calcium exchanger protein GPY04_RS10475 PF01380 SIS domain GPY04_RS10475 PF00571 CBS domain GPY04_RS10490 PF03968 OstA-like protein GPY04_RS10495 PF12399 Branched-chain amino acid ATP-binding cassette transporter GPY04_RS10495 PF00005 ABC transporter GPY04_RS10500 PF04552 Sigma-54, DNA binding domain GPY04_RS10500 PF04963 Sigma-54 factor, core binding domain GPY04_RS10500 PF00309 Sigma-54 factor, Activator interacting domain (AID) GPY04_RS10505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GPY04_RS10510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY04_RS10515 PF03668 P-loop ATPase protein family GPY04_RS10520 PF00381 PTS HPr component phosphorylation site GPY04_RS10525 PF01769 Divalent cation transporter GPY04_RS10525 PF00571 CBS domain GPY04_RS10525 PF03448 MgtE intracellular N domain GPY04_RS10530 PF01523 Putative modulator of DNA gyrase GPY04_RS10535 PF04751 Protein of unknown function (DUF615) GPY04_RS10540 PF00005 ABC transporter GPY04_RS10545 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS10555 PF02441 Flavoprotein GPY04_RS10560 PF01225 Mur ligase family, catalytic domain GPY04_RS10560 PF08245 Mur ligase middle domain GPY04_RS10560 PF02875 Mur ligase family, glutamate ligase domain GPY04_RS10565 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain GPY04_RS10570 PF00719 Inorganic pyrophosphatase GPY04_RS10575 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like GPY04_RS10580 PF04357 TamB, inner membrane protein subunit of TAM complex GPY04_RS10585 PF01103 Surface antigen GPY04_RS10585 PF17243 POTRA domain TamA domain 1 GPY04_RS10585 PF07244 Surface antigen variable number repeat GPY04_RS10590 PF01625 Peptide methionine sulfoxide reductase GPY04_RS10595 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) GPY04_RS10600 PF10795 Protein of unknown function (DUF2607) GPY04_RS10610 PF00005 ABC transporter GPY04_RS10635 PF00009 Elongation factor Tu GTP binding domain GPY04_RS10640 PF01507 Phosphoadenosine phosphosulfate reductase family GPY04_RS10645 PF14824 Sirohaem biosynthesis protein central GPY04_RS10645 PF10414 Sirohaem synthase dimerisation region GPY04_RS10645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GPY04_RS10650 PF00149 Calcineurin-like phosphoesterase GPY04_RS10650 PF02872 5'-nucleotidase, C-terminal domain GPY04_RS10660 PF00270 DEAD/DEAH box helicase GPY04_RS10660 PF03880 DbpA RNA binding domain GPY04_RS10660 PF00271 Helicase conserved C-terminal domain GPY04_RS10665 PF13673 Acetyltransferase (GNAT) domain GPY04_RS10670 PF00892 EamA-like transporter family GPY04_RS10675 PF04225 Opacity-associated protein A LysM-like domain GPY04_RS10675 PF08525 Opacity-associated protein A N-terminal motif GPY04_RS10680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY04_RS10680 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY04_RS10690 PF01196 Ribosomal protein L17 GPY04_RS10695 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GPY04_RS10695 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GPY04_RS10695 PF01000 RNA polymerase Rpb3/RpoA insert domain GPY04_RS10700 PF00163 Ribosomal protein S4/S9 N-terminal domain GPY04_RS10700 PF01479 S4 domain GPY04_RS10705 PF00411 Ribosomal protein S11 GPY04_RS10710 PF00416 Ribosomal protein S13/S18 GPY04_RS10715 PF00444 Ribosomal protein L36 GPY04_RS10720 PF00344 SecY translocase GPY04_RS10725 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GPY04_RS10730 PF00327 Ribosomal protein L30p/L7e GPY04_RS10735 PF00333 Ribosomal protein S5, N-terminal domain GPY04_RS10735 PF03719 Ribosomal protein S5, C-terminal domain GPY04_RS10740 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GPY04_RS10745 PF00347 Ribosomal protein L6 GPY04_RS10750 PF00410 Ribosomal protein S8 GPY04_RS10755 PF00253 Ribosomal protein S14p/S29e GPY04_RS10760 PF00281 Ribosomal protein L5 GPY04_RS10760 PF00673 ribosomal L5P family C-terminus GPY04_RS10765 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GPY04_RS10765 PF00467 KOW motif GPY04_RS10770 PF00238 Ribosomal protein L14p/L23e GPY04_RS10775 PF00366 Ribosomal protein S17 GPY04_RS10780 PF00831 Ribosomal L29 protein GPY04_RS10785 PF00252 Ribosomal protein L16p/L10e GPY04_RS10790 PF00189 Ribosomal protein S3, C-terminal domain GPY04_RS10790 PF07650 KH domain GPY04_RS10795 PF00237 Ribosomal protein L22p/L17e GPY04_RS10800 PF00203 Ribosomal protein S19 GPY04_RS10805 PF00181 Ribosomal Proteins L2, RNA binding domain GPY04_RS10805 PF03947 Ribosomal Proteins L2, C-terminal domain GPY04_RS10810 PF00276 Ribosomal protein L23 GPY04_RS10815 PF00573 Ribosomal protein L4/L1 family GPY04_RS10820 PF00297 Ribosomal protein L3 GPY04_RS10825 PF00338 Ribosomal protein S10p/S20e GPY04_RS10830 PF08032 RNA 2'-O ribose methyltransferase substrate binding GPY04_RS10830 PF00588 SpoU rRNA Methylase family GPY04_RS10835 PF08461 Ribonuclease R winged-helix domain GPY04_RS10835 PF00575 S1 RNA binding domain GPY04_RS10835 PF00773 RNB domain GPY04_RS10835 PF08206 Ribonuclease B OB domain GPY04_RS10835 PF17876 Cold shock domain GPY04_RS10840 PF00884 Sulfatase GPY04_RS10840 PF11893 Domain of unknown function (DUF3413) GPY04_RS10845 PF08238 Sel1 repeat GPY04_RS10850 PF00709 Adenylosuccinate synthetase GPY04_RS10855 PF01112 Asparaginase GPY04_RS10860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY04_RS10870 PF02254 TrkA-N domain GPY04_RS10870 PF00999 Sodium/hydrogen exchanger family GPY04_RS10875 PF02525 Flavodoxin-like fold GPY04_RS10880 PF12848 ABC transporter GPY04_RS10880 PF00005 ABC transporter GPY04_RS10890 PF00561 alpha/beta hydrolase fold GPY04_RS10895 PF06794 Uncharacterised protein family (UPF0270) GPY04_RS10900 PF00485 Phosphoribulokinase / Uridine kinase family GPY04_RS10905 PF00027 Cyclic nucleotide-binding domain GPY04_RS10905 PF13545 Crp-like helix-turn-helix domain GPY04_RS10915 PF00171 Aldehyde dehydrogenase family GPY04_RS10920 PF04958 Arginine N-succinyltransferase beta subunit GPY04_RS10925 PF00202 Aminotransferase class-III GPY04_RS10930 PF00117 Glutamine amidotransferase class-I GPY04_RS10935 PF00919 Uncharacterized protein family UPF0004 GPY04_RS10935 PF18693 TRAM domain GPY04_RS10935 PF04055 Radical SAM superfamily GPY04_RS10950 PF00579 tRNA synthetases class I (W and Y) GPY04_RS10955 PF13419 Haloacid dehalogenase-like hydrolase GPY04_RS10960 PF00834 Ribulose-phosphate 3 epimerase family GPY04_RS10965 PF02086 D12 class N6 adenine-specific DNA methyltransferase GPY04_RS10975 PF01761 3-dehydroquinate synthase GPY04_RS10980 PF01202 Shikimate kinase GPY04_RS10985 PF07660 Secretin and TonB N terminus short domain GPY04_RS10985 PF00263 Bacterial type II and III secretion system protein GPY04_RS10985 PF11741 AMIN domain GPY04_RS10985 PF03958 Bacterial type II/III secretion system short domain GPY04_RS11010 PF00905 Penicillin binding protein transpeptidase domain GPY04_RS11010 PF00912 Transglycosylase GPY04_RS11010 PF17092 Penicillin-binding protein OB-like domain GPY04_RS11015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS11015 PF03466 LysR substrate binding domain GPY04_RS11020 PF08534 Redoxin GPY04_RS11020 PF00462 Glutaredoxin GPY04_RS11025 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY04_RS11025 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS11035 PF14698 Argininosuccinate lyase C-terminal GPY04_RS11035 PF00206 Lyase GPY04_RS11040 PF00764 Arginosuccinate synthase GPY04_RS11045 PF00696 Amino acid kinase family GPY04_RS11050 PF01118 Semialdehyde dehydrogenase, NAD binding domain GPY04_RS11050 PF02774 Semialdehyde dehydrogenase, dimerisation domain GPY04_RS11055 PF01546 Peptidase family M20/M25/M40 GPY04_RS11055 PF07687 Peptidase dimerisation domain GPY04_RS11060 PF00311 Phosphoenolpyruvate carboxylase GPY04_RS11070 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS11070 PF06426 Serine acetyltransferase, N-terminal GPY04_RS11075 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GPY04_RS11075 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GPY04_RS11080 PF02556 Preprotein translocase subunit SecB GPY04_RS11085 PF00581 Rhodanese-like domain GPY04_RS11090 PF00152 tRNA synthetases class II (D, K and N) GPY04_RS11095 PF02910 Fumarate reductase flavoprotein C-term GPY04_RS11095 PF00890 FAD binding domain GPY04_RS11100 PF13085 2Fe-2S iron-sulfur cluster binding domain GPY04_RS11100 PF13183 4Fe-4S dicluster domain GPY04_RS11105 PF02300 Fumarate reductase subunit C GPY04_RS11110 PF02313 Fumarate reductase subunit D GPY04_RS11115 PF01132 Elongation factor P (EF-P) OB domain GPY04_RS11115 PF08207 Elongation factor P (EF-P) KOW-like domain GPY04_RS11115 PF09285 Elongation factor P, C-terminal GPY04_RS11120 PF04055 Radical SAM superfamily GPY04_RS11130 PF00118 TCP-1/cpn60 chaperonin family GPY04_RS11135 PF00166 Chaperonin 10 Kd subunit GPY04_RS11140 PF00455 DeoR C terminal sensor domain GPY04_RS11140 PF08220 DeoR-like helix-turn-helix domain GPY04_RS11160 PF00121 Triosephosphate isomerase GPY04_RS11170 PF03737 Aldolase/RraA GPY04_RS11175 PF01040 UbiA prenyltransferase family GPY04_RS11180 PF07724 AAA domain (Cdc48 subfamily) GPY04_RS11180 PF00004 ATPase family associated with various cellular activities (AAA) GPY04_RS11180 PF10431 C-terminal, D2-small domain, of ClpB protein GPY04_RS11185 PF00227 Proteasome subunit GPY04_RS11190 PF05036 Sporulation related domain GPY04_RS11195 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS11200 PF00270 DEAD/DEAH box helicase GPY04_RS11200 PF17764 3′ DNA-binding domain (3′BD) GPY04_RS11200 PF18074 Primosomal protein N C-terminal domain GPY04_RS11200 PF00271 Helicase conserved C-terminal domain GPY04_RS11200 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GPY04_RS11205 PF01197 Ribosomal protein L31 GPY04_RS11210 PF00390 Malic enzyme, N-terminal domain GPY04_RS11210 PF03949 Malic enzyme, NAD binding domain GPY04_RS11215 PF01340 Met Apo-repressor, MetJ GPY04_RS11220 PF01053 Cys/Met metabolism PLP-dependent enzyme GPY04_RS11225 PF00742 Homoserine dehydrogenase GPY04_RS11225 PF03447 Homoserine dehydrogenase, NAD binding domain GPY04_RS11225 PF00696 Amino acid kinase family GPY04_RS11230 PF02219 Methylenetetrahydrofolate reductase GPY04_RS11235 PF06005 Cell division protein ZapB GPY04_RS11240 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded GPY04_RS11245 PF00365 Phosphofructokinase GPY04_RS11250 PF16916 Dimerisation domain of Zinc Transporter GPY04_RS11250 PF01545 Cation efflux family GPY04_RS11260 PF00072 Response regulator receiver domain GPY04_RS11260 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS11265 PF16527 Two-component sensor protein CpxA, periplasmic domain GPY04_RS11265 PF00672 HAMP domain GPY04_RS11265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS11265 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS11270 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GPY04_RS11270 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GPY04_RS11275 PF00588 SpoU rRNA Methylase family GPY04_RS11280 PF04186 FxsA cytoplasmic membrane protein GPY04_RS11285 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS11285 PF17158 Membrane-associated sensor, integral membrane domain GPY04_RS11290 PF10415 Fumarase C C-terminus GPY04_RS11290 PF00206 Lyase GPY04_RS11295 PF03605 Anaerobic c4-dicarboxylate membrane transporter GPY04_RS11305 PF02683 Cytochrome C biogenesis protein transmembrane region GPY04_RS11305 PF11412 Disulphide bond corrector protein DsbC GPY04_RS11310 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS11310 PF00072 Response regulator receiver domain GPY04_RS11315 PF03471 Transporter associated domain GPY04_RS11315 PF00999 Sodium/hydrogen exchanger family GPY04_RS11315 PF02080 TrkA-C domain GPY04_RS11325 PF00474 Sodium:solute symporter family GPY04_RS11330 PF02592 Putative vitamin uptake transporter GPY04_RS11335 PF00625 Guanylate kinase GPY04_RS11340 PF01192 RNA polymerase Rpb6 GPY04_RS11345 PF13291 ACT domain GPY04_RS11345 PF04607 Region found in RelA / SpoT proteins GPY04_RS11345 PF02824 TGS domain GPY04_RS11350 PF17191 RecG wedge domain GPY04_RS11350 PF00271 Helicase conserved C-terminal domain GPY04_RS11350 PF00270 DEAD/DEAH box helicase GPY04_RS11355 PF00860 Permease family GPY04_RS11360 PF00672 HAMP domain GPY04_RS11360 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS11360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS11365 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS11365 PF00072 Response regulator receiver domain GPY04_RS11370 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY04_RS11370 PF03449 Transcription elongation factor, N-terminal GPY04_RS11375 PF00575 S1 RNA binding domain GPY04_RS11375 PF16921 Tex protein YqgF-like domain GPY04_RS11375 PF17674 HHH domain GPY04_RS11375 PF09371 Tex-like protein N-terminal domain GPY04_RS11385 PF00561 alpha/beta hydrolase fold GPY04_RS11390 PF00156 Phosphoribosyl transferase domain GPY04_RS11395 PF01106 NifU-like domain GPY04_RS11395 PF01521 Iron-sulphur cluster biosynthesis GPY04_RS11400 PF00293 NUDIX domain GPY04_RS11405 PF00459 Inositol monophosphatase family GPY04_RS11410 PF01203 Type II secretion system (T2SS), protein N GPY04_RS11415 PF04612 Type II secretion system (T2SS), protein M GPY04_RS11420 PF12693 GspL periplasmic domain GPY04_RS11420 PF05134 Type II secretion system (T2SS), protein L GPY04_RS11425 PF03934 Type II secretion system (T2SS), protein K GPY04_RS11430 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS11430 PF11612 Type II secretion system (T2SS), protein J GPY04_RS11435 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS11435 PF02501 Type II secretion system (T2SS), protein I GPY04_RS11440 PF12019 Type II transport protein GspH GPY04_RS11445 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS11445 PF08334 Type II secretion system (T2SS), protein G GPY04_RS11450 PF00482 Type II secretion system (T2SS), protein F GPY04_RS11455 PF00437 Type II/IV secretion system protein GPY04_RS11465 PF11356 Type II secretion system protein C GPY04_RS11470 PF01479 S4 domain GPY04_RS11475 PF01430 Hsp33 protein GPY04_RS11480 PF01293 Phosphoenolpyruvate carboxykinase GPY04_RS11490 PF09500 Putative thioesterase (yiiD_Cterm) GPY04_RS11490 PF00583 Acetyltransferase (GNAT) family GPY04_RS11495 PF02580 D-Tyr-tRNA(Tyr) deacylase GPY04_RS11500 PF03631 Virulence factor BrkB GPY04_RS11505 PF03668 P-loop ATPase protein family GPY04_RS11520 PF03951 Glutamine synthetase, beta-Grasp domain GPY04_RS11520 PF00120 Glutamine synthetase, catalytic domain GPY04_RS11530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS11530 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS11530 PF00989 PAS fold GPY04_RS11535 PF00158 Sigma-54 interaction domain GPY04_RS11535 PF00072 Response regulator receiver domain GPY04_RS11535 PF02954 Bacterial regulatory protein, Fis family GPY04_RS11540 PF00563 EAL domain GPY04_RS11540 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS11540 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS11540 PF13188 PAS domain GPY04_RS11545 PF00962 Adenosine/AMP deaminase GPY04_RS11615 PF01507 Phosphoadenosine phosphosulfate reductase family GPY04_RS11620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain GPY04_RS11620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain GPY04_RS11625 PF00667 FAD binding domain GPY04_RS11625 PF00258 Flavodoxin GPY04_RS11625 PF00175 Oxidoreductase NAD-binding domain GPY04_RS11645 PF09583 Phage shock protein G (Phageshock_PspG) GPY04_RS11650 PF01207 Dihydrouridine synthase (Dus) GPY04_RS11655 PF01475 Ferric uptake regulator family GPY04_RS11665 PF12706 Beta-lactamase superfamily domain GPY04_RS11670 PF00342 Phosphoglucose isomerase GPY04_RS11675 PF01894 Uncharacterised protein family UPF0047 GPY04_RS11680 PF00842 Alanine racemase, C-terminal domain GPY04_RS11680 PF01168 Alanine racemase, N-terminal domain GPY04_RS11685 PF00772 DnaB-like helicase N terminal domain GPY04_RS11685 PF03796 DnaB-like helicase C terminal domain GPY04_RS11695 PF01281 Ribosomal protein L9, N-terminal domain GPY04_RS11695 PF03948 Ribosomal protein L9, C-terminal domain GPY04_RS11700 PF01084 Ribosomal protein S18 GPY04_RS11705 PF00436 Single-strand binding protein family GPY04_RS11710 PF01250 Ribosomal protein S6 GPY04_RS11715 PF00210 Ferritin-like domain GPY04_RS11720 PF04324 BFD-like [2Fe-2S] binding domain GPY04_RS11725 PF03143 Elongation factor Tu C-terminal domain GPY04_RS11725 PF03144 Elongation factor Tu domain 2 GPY04_RS11725 PF00009 Elongation factor Tu GTP binding domain GPY04_RS11730 PF03764 Elongation factor G, domain IV GPY04_RS11730 PF14492 Elongation Factor G, domain II GPY04_RS11730 PF00679 Elongation factor G C-terminus GPY04_RS11730 PF03144 Elongation factor Tu domain 2 GPY04_RS11730 PF00009 Elongation factor Tu GTP binding domain GPY04_RS11735 PF00177 Ribosomal protein S7p/S5e GPY04_RS11740 PF00164 Ribosomal protein S12/S23 GPY04_RS11750 PF02635 DsrE/DsrF-like family GPY04_RS11755 PF02635 DsrE/DsrF-like family GPY04_RS11760 PF08348 YheO-like PAS domain GPY04_RS11760 PF13309 HTH domain GPY04_RS11765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY04_RS11765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY04_RS11775 PF04102 SlyX GPY04_RS11780 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) GPY04_RS11785 PF01145 SPFH domain / Band 7 family GPY04_RS11790 PF12221 Bacterial membrane protein N terminal GPY04_RS11790 PF01145 SPFH domain / Band 7 family GPY04_RS11795 PF01926 50S ribosome-binding GTPase GPY04_RS11795 PF13167 GTP-binding GTPase N-terminal GPY04_RS11795 PF16360 GTP-binding GTPase Middle Region GPY04_RS11800 PF17209 Hfq protein GPY04_RS11810 PF01119 DNA mismatch repair protein, C-terminal domain GPY04_RS11810 PF08676 MutL C terminal dimerisation domain GPY04_RS11815 PF01520 N-acetylmuramoyl-L-alanine amidase GPY04_RS11820 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GPY04_RS11825 PF08331 Domain of unknown function (DUF1730) GPY04_RS11880 PF00929 Exonuclease GPY04_RS11885 PF03193 RsgA GTPase GPY04_RS11890 PF02666 Phosphatidylserine decarboxylase GPY04_RS11895 PF03600 Citrate transporter GPY04_RS11895 PF02080 TrkA-C domain GPY04_RS11905 PF01676 Metalloenzyme superfamily GPY04_RS11905 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GPY04_RS11910 PF01551 Peptidase family M23 GPY04_RS11920 PF00440 Bacterial regulatory proteins, tetR family GPY04_RS11920 PF08360 QacR-like protein, C-terminal region GPY04_RS11925 PF01208 Uroporphyrinogen decarboxylase (URO-D) GPY04_RS11930 PF09297 NADH pyrophosphatase zinc ribbon domain GPY04_RS11930 PF00293 NUDIX domain GPY04_RS11935 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GPY04_RS11940 PF04998 RNA polymerase Rpb1, domain 5 GPY04_RS11940 PF04983 RNA polymerase Rpb1, domain 3 GPY04_RS11940 PF04997 RNA polymerase Rpb1, domain 1 GPY04_RS11940 PF05000 RNA polymerase Rpb1, domain 4 GPY04_RS11940 PF00623 RNA polymerase Rpb1, domain 2 GPY04_RS11945 PF04563 RNA polymerase beta subunit GPY04_RS11945 PF04561 RNA polymerase Rpb2, domain 2 GPY04_RS11945 PF00562 RNA polymerase Rpb2, domain 6 GPY04_RS11945 PF10385 RNA polymerase beta subunit external 1 domain GPY04_RS11945 PF04565 RNA polymerase Rpb2, domain 3 GPY04_RS11945 PF04560 RNA polymerase Rpb2, domain 7 GPY04_RS11950 PF16320 Ribosomal protein L7/L12 dimerisation domain GPY04_RS11950 PF00542 Ribosomal protein L7/L12 C-terminal domain GPY04_RS11955 PF00466 Ribosomal protein L10 GPY04_RS11960 PF00687 Ribosomal protein L1p/L10e family GPY04_RS11965 PF03946 Ribosomal protein L11, N-terminal domain GPY04_RS11965 PF00298 Ribosomal protein L11, RNA binding domain GPY04_RS11970 PF02357 Transcription termination factor nusG GPY04_RS11970 PF00467 KOW motif GPY04_RS11975 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GPY04_RS11980 PF00009 Elongation factor Tu GTP binding domain GPY04_RS11980 PF03144 Elongation factor Tu domain 2 GPY04_RS11980 PF03143 Elongation factor Tu C-terminal domain GPY04_RS12005 PF00485 Phosphoribulokinase / Uridine kinase family GPY04_RS12010 PF02237 Biotin protein ligase C terminal domain GPY04_RS12010 PF08279 HTH domain GPY04_RS12010 PF03099 Biotin/lipoate A/B protein ligase family GPY04_RS12015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GPY04_RS12015 PF01565 FAD binding domain GPY04_RS12025 PF13091 PLD-like domain GPY04_RS12060 PF00175 Oxidoreductase NAD-binding domain GPY04_RS12065 PF00970 Oxidoreductase FAD-binding domain GPY04_RS12065 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY04_RS12065 PF00175 Oxidoreductase NAD-binding domain GPY04_RS12070 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GPY04_RS12080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY04_RS12080 PF07497 Rho termination factor, RNA-binding domain GPY04_RS12080 PF07498 Rho termination factor, N-terminal domain GPY04_RS12085 PF00085 Thioredoxin GPY04_RS12090 PF00270 DEAD/DEAH box helicase GPY04_RS12090 PF00271 Helicase conserved C-terminal domain GPY04_RS12095 PF02541 Ppx/GppA phosphatase family GPY04_RS12100 PF09456 RcsC Alpha-Beta-Loop (ABL) GPY04_RS12100 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS12100 PF00072 Response regulator receiver domain GPY04_RS12100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS12105 PF12832 MFS_1 like family GPY04_RS12125 PF16177 Acetyl-coenzyme A synthetase N-terminus GPY04_RS12125 PF13193 AMP-binding enzyme C-terminal domain GPY04_RS12125 PF00501 AMP-binding enzyme GPY04_RS12130 PF01220 Dehydroquinase class II GPY04_RS12135 PF00364 Biotin-requiring enzyme GPY04_RS12140 PF02785 Biotin carboxylase C-terminal domain GPY04_RS12140 PF00289 Biotin carboxylase, N-terminal domain GPY04_RS12140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GPY04_RS12150 PF01207 Dihydrouridine synthase (Dus) GPY04_RS12155 PF02954 Bacterial regulatory protein, Fis family GPY04_RS12160 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY04_RS12160 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS12165 PF00920 Dehydratase family GPY04_RS12170 PF01202 Shikimate kinase GPY04_RS12175 PF02447 GntP family permease GPY04_RS12180 PF01081 KDPG and KHG aldolase GPY04_RS12185 PF00593 TonB dependent receptor GPY04_RS12185 PF07715 TonB-dependent Receptor Plug Domain GPY04_RS12200 PF00672 HAMP domain GPY04_RS12200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS12200 PF17200 Single Cache domain 2 GPY04_RS12205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GPY04_RS12205 PF01276 Orn/Lys/Arg decarboxylase, major domain GPY04_RS12205 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GPY04_RS12210 PF13520 Amino acid permease GPY04_RS12215 PF18500 CadC C-terminal domain 1 GPY04_RS12215 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS12220 PF13411 MerR HTH family regulatory protein GPY04_RS12230 PF02142 MGS-like domain GPY04_RS12230 PF01808 AICARFT/IMPCHase bienzyme GPY04_RS12235 PF02844 Phosphoribosylglycinamide synthetase, N domain GPY04_RS12235 PF02843 Phosphoribosylglycinamide synthetase, C domain GPY04_RS12235 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GPY04_RS12245 PF00216 Bacterial DNA-binding protein GPY04_RS12250 PF00571 CBS domain GPY04_RS12250 PF01595 Cyclin M transmembrane N-terminal domain GPY04_RS12255 PF00480 ROK family GPY04_RS12260 PF01238 Phosphomannose isomerase type I GPY04_RS12265 PF04222 Protein of unknown function (DUF416) GPY04_RS12270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY04_RS12275 PF03167 Uracil DNA glycosylase superfamily GPY04_RS12280 PF00924 Mechanosensitive ion channel GPY04_RS12285 PF00753 Metallo-beta-lactamase superfamily GPY04_RS12285 PF10996 Beta-Casp domain GPY04_RS12285 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GPY04_RS12290 PF02397 Bacterial sugar transferase GPY04_RS12295 PF01370 NAD dependent epimerase/dehydratase family GPY04_RS12300 PF02719 Polysaccharide biosynthesis protein GPY04_RS12325 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS12335 PF00171 Aldehyde dehydrogenase family GPY04_RS12335 PF00465 Iron-containing alcohol dehydrogenase GPY04_RS12340 PF13193 AMP-binding enzyme C-terminal domain GPY04_RS12340 PF00501 AMP-binding enzyme GPY04_RS12350 PF14524 Wzt C-terminal domain GPY04_RS12350 PF00005 ABC transporter GPY04_RS12365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GPY04_RS12370 PF16363 GDP-mannose 4,6 dehydratase GPY04_RS12375 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY04_RS12375 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY04_RS12375 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY04_RS12375 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY04_RS12380 PF00483 Nucleotidyl transferase GPY04_RS12380 PF01050 Mannose-6-phosphate isomerase GPY04_RS12385 PF01370 NAD dependent epimerase/dehydratase family GPY04_RS12390 PF00457 Glycosyl hydrolases family 11 GPY04_RS12390 PF01522 Polysaccharide deacetylase GPY04_RS12405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY04_RS12415 PF04488 Glycosyltransferase sugar-binding region containing DXD motif GPY04_RS12420 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GPY04_RS12455 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY04_RS12460 PF00535 Glycosyl transferase family 2 GPY04_RS12465 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GPY04_RS12470 PF01467 Cytidylyltransferase-like GPY04_RS12475 PF06827 Zinc finger found in FPG and IleRS GPY04_RS12475 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GPY04_RS12475 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GPY04_RS12485 PF00471 Ribosomal protein L33 GPY04_RS12490 PF00830 Ribosomal L28 family GPY04_RS12495 PF04002 RadC-like JAB domain GPY04_RS12500 PF02743 Cache domain GPY04_RS12500 PF00672 HAMP domain GPY04_RS12500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS12505 PF02441 Flavoprotein GPY04_RS12505 PF04127 DNA / pantothenate metabolism flavoprotein GPY04_RS12515 PF00440 Bacterial regulatory proteins, tetR family GPY04_RS12520 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY04_RS12525 PF03279 Bacterial lipid A biosynthesis acyltransferase GPY04_RS12530 PF00156 Phosphoribosyl transferase domain GPY04_RS12535 PF03725 3' exoribonuclease family, domain 2 GPY04_RS12535 PF01138 3' exoribonuclease family, domain 1 GPY04_RS12540 PF08340 Domain of unknown function (DUF1732) GPY04_RS12540 PF03755 YicC-like family, N-terminal region GPY04_RS12545 PF03350 Uncharacterized protein family, UPF0114 GPY04_RS12550 PF00367 phosphotransferase system, EIIB GPY04_RS12550 PF02378 Phosphotransferase system, EIIC GPY04_RS12555 PF13580 SIS domain GPY04_RS12565 PF01380 SIS domain GPY04_RS12565 PF01418 Helix-turn-helix domain, rpiR family GPY04_RS12570 PF01032 FecCD transport family GPY04_RS12575 PF01497 Periplasmic binding protein GPY04_RS12580 PF00005 ABC transporter GPY04_RS12585 PF00593 TonB dependent receptor GPY04_RS12585 PF07715 TonB-dependent Receptor Plug Domain GPY04_RS12590 PF00005 ABC transporter GPY04_RS12590 PF00664 ABC transporter transmembrane region GPY04_RS12605 PF00271 Helicase conserved C-terminal domain GPY04_RS12605 PF09382 RQC domain GPY04_RS12605 PF16124 RecQ zinc-binding GPY04_RS12605 PF00570 HRDC domain GPY04_RS12605 PF00270 DEAD/DEAH box helicase GPY04_RS12610 PF00892 EamA-like transporter family GPY04_RS12620 PF12833 Helix-turn-helix domain GPY04_RS12625 PF01810 LysE type translocator GPY04_RS12630 PF00580 UvrD/REP helicase N-terminal domain GPY04_RS12630 PF13361 UvrD-like helicase C-terminal domain GPY04_RS12635 PF01432 Peptidase family M3 GPY04_RS12640 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GPY04_RS12645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY04_RS12645 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS12720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY04_RS12730 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS12730 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY04_RS12740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY04_RS12745 PF00005 ABC transporter GPY04_RS12745 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY04_RS12785 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GPY04_RS12790 PF00580 UvrD/REP helicase N-terminal domain GPY04_RS12790 PF13361 UvrD-like helicase C-terminal domain GPY04_RS12795 PF00440 Bacterial regulatory proteins, tetR family GPY04_RS12800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY04_RS12805 PF00873 AcrB/AcrD/AcrF family GPY04_RS12810 PF04380 Membrane fusogenic activity GPY04_RS12815 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain GPY04_RS12815 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain GPY04_RS12820 PF03466 LysR substrate binding domain GPY04_RS12820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS12865 PF12724 Flavodoxin domain GPY04_RS12870 PF02386 Cation transport protein GPY04_RS12875 PF09186 Domain of unknown function (DUF1949) GPY04_RS12875 PF01205 Uncharacterized protein family UPF0029 GPY04_RS12880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GPY04_RS12880 PF00378 Enoyl-CoA hydratase/isomerase GPY04_RS12880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GPY04_RS12885 PF02803 Thiolase, C-terminal domain GPY04_RS12885 PF00108 Thiolase, N-terminal domain GPY04_RS12890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS12890 PF03466 LysR substrate binding domain GPY04_RS12895 PF07690 Major Facilitator Superfamily GPY04_RS12900 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS12900 PF12804 MobA-like NTP transferase domain GPY04_RS12905 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GPY04_RS12905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GPY04_RS12910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY04_RS12910 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY04_RS12915 PF00231 ATP synthase GPY04_RS12920 PF02874 ATP synthase alpha/beta family, beta-barrel domain GPY04_RS12920 PF00306 ATP synthase alpha/beta chain, C terminal domain GPY04_RS12920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GPY04_RS12925 PF00213 ATP synthase delta (OSCP) subunit GPY04_RS12930 PF00430 ATP synthase B/B' CF(0) GPY04_RS12935 PF00137 ATP synthase subunit C GPY04_RS12940 PF00119 ATP synthase A chain GPY04_RS12945 PF03899 ATP synthase I chain GPY04_RS12950 PF17762 HTH domain found in ParB protein GPY04_RS12950 PF02195 ParB-like nuclease domain GPY04_RS12955 PF13614 AAA domain GPY04_RS12960 PF02527 rRNA small subunit methyltransferase G GPY04_RS12965 PF13932 GidA associated domain GPY04_RS12965 PF01134 Glucose inhibited division protein A GPY04_RS12975 PF00258 Flavodoxin GPY04_RS12980 PF10396 GTP-binding protein TrmE N-terminus GPY04_RS12980 PF12631 MnmE helical domain GPY04_RS12980 PF01926 50S ribosome-binding GTPase GPY04_RS12985 PF02096 60Kd inner membrane protein GPY04_RS12985 PF14849 YidC periplasmic domain GPY04_RS12990 PF01809 Putative membrane protein insertion efficiency factor GPY04_RS12995 PF00825 Ribonuclease P GPY04_RS13000 PF00468 Ribosomal protein L34 GPY04_RS13005 PF00005 ABC transporter GPY04_RS13010 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS13015 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY04_RS13020 PF11638 DnaA N-terminal domain GPY04_RS13020 PF00308 Bacterial dnaA protein GPY04_RS13020 PF08299 Bacterial dnaA protein helix-turn-helix GPY04_RS13025 PF02768 DNA polymerase III beta subunit, C-terminal domain GPY04_RS13025 PF02767 DNA polymerase III beta subunit, central domain GPY04_RS13025 PF00712 DNA polymerase III beta subunit, N-terminal domain GPY04_RS13030 PF02463 RecF/RecN/SMC N terminal domain GPY04_RS13035 PF00986 DNA gyrase B subunit, carboxyl terminus GPY04_RS13035 PF00204 DNA gyrase B GPY04_RS13035 PF18053 DNA gyrase B subunit insert domain GPY04_RS13035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS13035 PF01751 Toprim domain GPY04_RS13050 PF00011 Hsp20/alpha crystallin family GPY04_RS13055 PF00155 Aminotransferase class I and II GPY04_RS13060 PF02092 Glycyl-tRNA synthetase beta subunit GPY04_RS13060 PF05746 DALR anticodon binding domain GPY04_RS13065 PF02091 Glycyl-tRNA synthetase alpha subunit GPY04_RS13070 PF01169 Uncharacterized protein family UPF0016 GPY04_RS13080 PF01206 Sulfurtransferase TusA GPY04_RS13090 PF08240 Alcohol dehydrogenase GroES-like domain GPY04_RS13090 PF00107 Zinc-binding dehydrogenase GPY04_RS13095 PF00585 C-terminal regulatory domain of Threonine dehydratase GPY04_RS13095 PF00291 Pyridoxal-phosphate dependent enzyme GPY04_RS13100 PF00920 Dehydratase family GPY04_RS13105 PF01063 Amino-transferase class IV GPY04_RS13115 PF00205 Thiamine pyrophosphate enzyme, central domain GPY04_RS13115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GPY04_RS13115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY04_RS13120 PF13335 Magnesium chelatase, subunit ChlI C-terminal GPY04_RS13120 PF01078 Magnesium chelatase, subunit ChlI GPY04_RS13125 PF01553 Acyltransferase GPY04_RS13130 PF01323 DSBA-like thioredoxin domain GPY04_RS13135 PF01636 Phosphotransferase enzyme family GPY04_RS13140 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase GPY04_RS13140 PF12801 4Fe-4S binding domain GPY04_RS13140 PF13746 4Fe-4S dicluster domain GPY04_RS13145 PF06288 Protein of unknown function (DUF1040) GPY04_RS13155 PF07070 SpoOM protein GPY04_RS13160 PF03006 Haemolysin-III related GPY04_RS13170 PF02386 Cation transport protein GPY04_RS13175 PF02254 TrkA-N domain GPY04_RS13175 PF02080 TrkA-C domain GPY04_RS13180 PF01029 NusB family GPY04_RS13180 PF01189 16S rRNA methyltransferase RsmB/F GPY04_RS13185 PF00551 Formyl transferase GPY04_RS13185 PF02911 Formyl transferase, C-terminal domain GPY04_RS13190 PF01327 Polypeptide deformylase GPY04_RS13195 PF01476 LysM domain GPY04_RS13200 PF02481 DNA recombination-mediator protein A GPY04_RS13200 PF17782 DprA winged helix domain GPY04_RS13205 PF04361 Protein of unknown function (DUF494) GPY04_RS13210 PF01396 Topoisomerase DNA binding C4 zinc finger GPY04_RS13215 PF02222 ATP-grasp domain GPY04_RS13215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GPY04_RS13220 PF00731 AIR carboxylase GPY04_RS13225 PF01300 Telomere recombination GPY04_RS13230 PF01218 Coproporphyrinogen III oxidase GPY04_RS13235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GPY04_RS13235 PF01488 Shikimate / quinate 5-dehydrogenase GPY04_RS13235 PF08501 Shikimate dehydrogenase substrate binding domain GPY04_RS13245 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS13285 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GPY04_RS13290 PF01964 Radical SAM ThiC family GPY04_RS13290 PF13667 ThiC-associated domain GPY04_RS13295 PF02581 Thiamine monophosphate synthase GPY04_RS13300 PF00899 ThiF family GPY04_RS13305 PF02597 ThiS family GPY04_RS13310 PF05690 Thiazole biosynthesis protein ThiG GPY04_RS13315 PF04055 Radical SAM superfamily GPY04_RS13315 PF06968 Biotin and Thiamin Synthesis associated domain GPY04_RS13320 PF01321 Creatinase/Prolidase N-terminal domain GPY04_RS13320 PF01321 Creatinase/Prolidase N-terminal domain GPY04_RS13320 PF00557 Metallopeptidase family M24 GPY04_RS13320 PF00557 Metallopeptidase family M24 GPY04_RS13325 PF03466 LysR substrate binding domain GPY04_RS13325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS13330 PF07690 Major Facilitator Superfamily GPY04_RS13340 PF01037 Lrp/AsnC ligand binding domain GPY04_RS13345 PF00563 EAL domain GPY04_RS13345 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS13345 PF08448 PAS fold GPY04_RS13350 PF04445 Putative SAM-dependent methyltransferase GPY04_RS13360 PF00892 EamA-like transporter family GPY04_RS13365 PF00582 Universal stress protein family GPY04_RS13375 PF00210 Ferritin-like domain GPY04_RS13380 PF10625 Universal stress protein B (UspB) GPY04_RS13395 PF02646 RmuC family GPY04_RS13400 PF01209 ubiE/COQ5 methyltransferase family GPY04_RS13405 PF02036 SCP-2 sterol transfer family GPY04_RS13410 PF03109 ABC1 family GPY04_RS13415 PF02416 mttA/Hcf106 family GPY04_RS13420 PF02416 mttA/Hcf106 family GPY04_RS13425 PF00902 Sec-independent protein translocase protein (TatC) GPY04_RS13430 PF03150 Di-haem cytochrome c peroxidase GPY04_RS13430 PF00034 Cytochrome c GPY04_RS13435 PF01554 MatE GPY04_RS13445 PF00717 Peptidase S24-like GPY04_RS13445 PF01726 LexA DNA binding domain GPY04_RS13450 PF01553 Acyltransferase GPY04_RS13455 PF01040 UbiA prenyltransferase family GPY04_RS13460 PF04345 Chorismate lyase GPY04_RS13470 PF03748 Flagellar basal body-associated protein FliL GPY04_RS13475 PF00672 HAMP domain GPY04_RS13475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS13475 PF02203 Tar ligand binding domain homologue GPY04_RS13480 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease GPY04_RS13480 PF01694 Rhomboid family GPY04_RS13485 PF00581 Rhodanese-like domain GPY04_RS13490 PF01026 TatD related DNase GPY04_RS13495 PF00490 Delta-aminolevulinic acid dehydratase GPY04_RS13505 PF00476 DNA polymerase family A GPY04_RS13505 PF01612 3'-5' exonuclease GPY04_RS13505 PF01367 5'-3' exonuclease, C-terminal SAM fold GPY04_RS13505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GPY04_RS13510 PF01926 50S ribosome-binding GTPase GPY04_RS13515 PF00034 Cytochrome c GPY04_RS13525 PF04220 Der GTPase activator (YihI) GPY04_RS13530 PF10675 Protein of unknown function (DUF2489) GPY04_RS13535 PF06969 HemN C-terminal domain GPY04_RS13535 PF04055 Radical SAM superfamily GPY04_RS13540 PF07219 HemY protein N-terminus GPY04_RS13545 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase GPY04_RS13550 PF02602 Uroporphyrinogen-III synthase HemD GPY04_RS13555 PF03900 Porphobilinogen deaminase, C-terminal domain GPY04_RS13555 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GPY04_RS13565 PF01295 Adenylate cyclase, class-I GPY04_RS13565 PF12633 Adenylate cyclase NT domain GPY04_RS13570 PF01491 Frataxin-like domain GPY04_RS13580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY04_RS13580 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain GPY04_RS13585 PF01678 Diaminopimelate epimerase GPY04_RS13590 PF04340 Protein of unknown function, DUF484 GPY04_RS13595 PF02899 Phage integrase, N-terminal SAM-like domain GPY04_RS13595 PF00589 Phage integrase family GPY04_RS13600 PF13419 Haloacid dehalogenase-like hydrolase GPY04_RS13605 PF10442 FIST C domain GPY04_RS13605 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS13605 PF00563 EAL domain GPY04_RS13605 PF08495 FIST N domain GPY04_RS13625 PF12146 Serine aminopeptidase, S33 GPY04_RS13630 PF01810 LysE type translocator GPY04_RS13635 PF00563 EAL domain GPY04_RS13635 PF08668 HDOD domain GPY04_RS13640 PF00210 Ferritin-like domain GPY04_RS13675 PF00448 SRP54-type protein, GTPase domain GPY04_RS13675 PF02881 SRP54-type protein, helical bundle domain GPY04_RS13680 PF00005 ABC transporter GPY04_RS13685 PF18075 FtsX extracellular domain GPY04_RS13690 PF00140 Sigma-70 factor, region 1.2 GPY04_RS13690 PF04542 Sigma-70 region 2 GPY04_RS13690 PF04545 Sigma-70, region 4 GPY04_RS13695 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS13695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY04_RS13700 PF00440 Bacterial regulatory proteins, tetR family GPY04_RS13710 PF05958 tRNA (Uracil-5-)-methyltransferase GPY04_RS13715 PF00593 TonB dependent receptor GPY04_RS13715 PF07715 TonB-dependent Receptor Plug Domain GPY04_RS13720 PF05922 Peptidase inhibitor I9 GPY04_RS13720 PF04151 Bacterial pre-peptidase C-terminal domain GPY04_RS13720 PF00082 Subtilase family GPY04_RS13725 PF01177 Asp/Glu/Hydantoin racemase GPY04_RS13790 PF00999 Sodium/hydrogen exchanger family GPY04_RS13795 PF02965 Vitamin B12 dependent methionine synthase, activation domain GPY04_RS13795 PF02574 Homocysteine S-methyltransferase GPY04_RS13795 PF00809 Pterin binding enzyme GPY04_RS13795 PF02310 B12 binding domain GPY04_RS13795 PF02607 B12 binding domain GPY04_RS13800 PF00696 Amino acid kinase family GPY04_RS13800 PF01842 ACT domain GPY04_RS13805 PF00266 Aminotransferase class-V GPY04_RS13815 PF00005 ABC transporter GPY04_RS13815 PF17760 UvrA interaction domain GPY04_RS13815 PF17755 UvrA DNA-binding domain GPY04_RS13820 PF00483 Nucleotidyl transferase GPY04_RS13825 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS13830 PF00436 Single-strand binding protein family GPY04_RS13835 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS13835 PF00563 EAL domain GPY04_RS13835 PF17157 Gammaproteobacterial periplasmic sensor domain GPY04_RS13855 PF11741 AMIN domain GPY04_RS13855 PF00263 Bacterial type II and III secretion system protein GPY04_RS13855 PF07660 Secretin and TonB N terminus short domain GPY04_RS13855 PF03958 Bacterial type II/III secretion system short domain GPY04_RS13860 PF01471 Putative peptidoglycan binding domain GPY04_RS13860 PF13401 AAA domain GPY04_RS13870 PF00437 Type II/IV secretion system protein GPY04_RS13875 PF00482 Type II secretion system (T2SS), protein F GPY04_RS13885 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS13885 PF00114 Pilin (bacterial filament) GPY04_RS13890 PF07963 Prokaryotic N-terminal methylation motif GPY04_RS13890 PF00114 Pilin (bacterial filament) GPY04_RS13925 PF04085 rod shape-determining protein MreC GPY04_RS13930 PF04093 rod shape-determining protein MreD GPY04_RS13935 PF02545 Maf-like protein GPY04_RS13940 PF00575 S1 RNA binding domain GPY04_RS13940 PF10150 Ribonuclease E/G family GPY04_RS14005 PF01797 Transposase IS200 like GPY04_RS14020 PF07859 alpha/beta hydrolase fold GPY04_RS14090 PF05016 ParE toxin of type II toxin-antitoxin system, parDE GPY04_RS14100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY04_RS14120 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS14125 PF05598 Transposase domain (DUF772) GPY04_RS14125 PF01609 Transposase DDE domain GPY04_RS14140 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA GPY04_RS14145 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system GPY04_RS14185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY04_RS14235 PF12833 Helix-turn-helix domain GPY04_RS14235 PF01965 DJ-1/PfpI family GPY04_RS14275 PF01555 DNA methylase GPY04_RS14295 PF05016 ParE toxin of type II toxin-antitoxin system, parDE GPY04_RS14300 PF08212 Lipocalin-like domain GPY04_RS14325 PF17676 LD-carboxypeptidase C-terminal domain GPY04_RS14325 PF02016 LD-carboxypeptidase N-terminal domain GPY04_RS14445 PF13302 Acetyltransferase (GNAT) domain GPY04_RS14500 PF08212 Lipocalin-like domain GPY04_RS14530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY04_RS14560 PF02567 Phenazine biosynthesis-like protein GPY04_RS14580 PF01381 Helix-turn-helix GPY04_RS14585 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB GPY04_RS14755 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH GPY04_RS14790 PF01810 LysE type translocator GPY04_RS14800 PF04229 GrpB protein GPY04_RS14815 PF08212 Lipocalin-like domain GPY04_RS14835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY04_RS14865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY04_RS14885 PF17676 LD-carboxypeptidase C-terminal domain GPY04_RS14885 PF02016 LD-carboxypeptidase N-terminal domain GPY04_RS14945 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY04_RS14970 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ GPY04_RS15005 PF08212 Lipocalin-like domain GPY04_RS15010 PF13302 Acetyltransferase (GNAT) domain GPY04_RS15030 PF00293 NUDIX domain GPY04_RS15060 PF13286 Phosphohydrolase-associated domain GPY04_RS15060 PF01966 HD domain GPY04_RS15105 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS15150 PF13495 Phage integrase, N-terminal SAM-like domain GPY04_RS15150 PF00589 Phage integrase family GPY04_RS15155 PF00453 Ribosomal protein L20 GPY04_RS15160 PF01632 Ribosomal protein L35 GPY04_RS15165 PF05198 Translation initiation factor IF-3, N-terminal domain GPY04_RS15165 PF00707 Translation initiation factor IF-3, C-terminal domain GPY04_RS15170 PF03129 Anticodon binding domain GPY04_RS15170 PF02824 TGS domain GPY04_RS15170 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GPY04_RS15170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GPY04_RS15195 PF05598 Transposase domain (DUF772) GPY04_RS15195 PF01609 Transposase DDE domain GPY04_RS15205 PF08669 Glycine cleavage T-protein C-terminal barrel domain GPY04_RS15205 PF01571 Aminomethyltransferase folate-binding domain GPY04_RS15215 PF00464 Serine hydroxymethyltransferase GPY04_RS15220 PF01597 Glycine cleavage H-protein GPY04_RS15225 PF02347 Glycine cleavage system P-protein GPY04_RS15235 PF01797 Transposase IS200 like GPY04_RS15240 PF00194 Eukaryotic-type carbonic anhydrase GPY04_RS15255 PF00768 D-alanyl-D-alanine carboxypeptidase GPY04_RS15255 PF07943 Penicillin-binding protein 5, C-terminal domain GPY04_RS15265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS15265 PF00672 HAMP domain GPY04_RS15265 PF02743 Cache domain GPY04_RS15270 PF07690 Major Facilitator Superfamily GPY04_RS15310 PF13426 PAS domain GPY04_RS15310 PF14827 Double sensory domain of two-component sensor kinase GPY04_RS15310 PF00672 HAMP domain GPY04_RS15310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS15310 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS15315 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS15315 PF00072 Response regulator receiver domain GPY04_RS15335 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS15340 PF00128 Alpha amylase, catalytic domain GPY04_RS15345 PF01292 Prokaryotic cytochrome b561 GPY04_RS15355 PF08220 DeoR-like helix-turn-helix domain GPY04_RS15355 PF00455 DeoR C terminal sensor domain GPY04_RS15360 PF03611 PTS system sugar-specific permease component GPY04_RS15365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY04_RS15370 PF00596 Class II Aldolase and Adducin N-terminal domain GPY04_RS15380 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GPY04_RS15385 PF01261 Xylose isomerase-like TIM barrel GPY04_RS15395 PF00072 Response regulator receiver domain GPY04_RS15395 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS15400 PF00672 HAMP domain GPY04_RS15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS15400 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS15415 PF00871 Acetokinase family GPY04_RS15425 PF00593 TonB dependent receptor GPY04_RS15425 PF07715 TonB-dependent Receptor Plug Domain GPY04_RS15430 PF12833 Helix-turn-helix domain GPY04_RS15435 PF00005 ABC transporter GPY04_RS15440 PF01032 FecCD transport family GPY04_RS15445 PF01032 FecCD transport family GPY04_RS15465 PF00801 PKD domain GPY04_RS15465 PF05547 Immune inhibitor A peptidase M6 GPY04_RS15470 PF03280 Proteobacterial lipase chaperone protein GPY04_RS15475 PF00561 alpha/beta hydrolase fold GPY04_RS15480 PF12729 Four helix bundle sensory module for signal transduction GPY04_RS15480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS15480 PF00672 HAMP domain GPY04_RS15485 PF07968 Leukocidin/Hemolysin toxin family GPY04_RS15485 PF12563 Hemolytic toxin N terminal GPY04_RS15485 PF16458 Beta-prism lectin GPY04_RS15490 PF00657 GDSL-like Lipase/Acylhydrolase GPY04_RS15495 PF08448 PAS fold GPY04_RS15495 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS15505 PF07690 Major Facilitator Superfamily GPY04_RS15510 PF03553 Na+/H+ antiporter family GPY04_RS15520 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS15520 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY04_RS15520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS15525 PF11849 Domain of unknown function (DUF3369) GPY04_RS15535 PF01467 Cytidylyltransferase-like GPY04_RS15540 PF02540 NAD synthase GPY04_RS15545 PF03605 Anaerobic c4-dicarboxylate membrane transporter GPY04_RS15550 PF00271 Helicase conserved C-terminal domain GPY04_RS15550 PF00270 DEAD/DEAH box helicase GPY04_RS15565 PF01797 Transposase IS200 like GPY04_RS15585 PF00145 C-5 cytosine-specific DNA methylase GPY04_RS15590 PF00478 IMP dehydrogenase / GMP reductase domain GPY04_RS15600 PF07885 Ion channel GPY04_RS15610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY04_RS15610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY04_RS15615 PF01256 Carbohydrate kinase GPY04_RS15615 PF03853 YjeF-related protein N-terminus GPY04_RS15625 PF00072 Response regulator receiver domain GPY04_RS15640 PF03889 Alternative ribosome-rescue factor A GPY04_RS15645 PF00313 'Cold-shock' DNA-binding domain GPY04_RS15650 PF00175 Oxidoreductase NAD-binding domain GPY04_RS15650 PF00042 Globin GPY04_RS15650 PF00970 Oxidoreductase FAD-binding domain GPY04_RS15655 PF01590 GAF domain GPY04_RS15655 PF00158 Sigma-54 interaction domain GPY04_RS15665 PF01546 Peptidase family M20/M25/M40 GPY04_RS15665 PF07687 Peptidase dimerisation domain GPY04_RS15670 PF01773 Na+ dependent nucleoside transporter N-terminus GPY04_RS15670 PF07662 Na+ dependent nucleoside transporter C-terminus GPY04_RS15670 PF07670 Nucleoside recognition GPY04_RS15685 PF02743 Cache domain GPY04_RS15685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS15685 PF00672 HAMP domain GPY04_RS15690 PF17863 AAA lid domain GPY04_RS15690 PF07726 ATPase family associated with various cellular activities (AAA) GPY04_RS15695 PF01882 Protein of unknown function DUF58 GPY04_RS15710 PF07584 Aerotolerance regulator N-terminal GPY04_RS15710 PF13519 von Willebrand factor type A domain GPY04_RS15725 PF00313 'Cold-shock' DNA-binding domain GPY04_RS15730 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS15730 PF08448 PAS fold GPY04_RS15730 PF00563 EAL domain GPY04_RS15740 PF12843 Putative quorum-sensing-regulated virulence factor GPY04_RS15750 PF01212 Beta-eliminating lyase GPY04_RS15755 PF03222 Tryptophan/tyrosine permease family GPY04_RS15760 PF00582 Universal stress protein family GPY04_RS15770 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GPY04_RS15770 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter GPY04_RS15770 PF13244 Domain of unknown function (DUF4040) GPY04_RS15770 PF00361 Proton-conducting membrane transporter GPY04_RS15790 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) GPY04_RS15795 PF03334 Na+/H+ antiporter subunit GPY04_RS15805 PF01327 Polypeptide deformylase GPY04_RS15810 PF00041 Fibronectin type III domain GPY04_RS15810 PF12561 ToxR activated gene A lipoprotein domain GPY04_RS15815 PF01266 FAD dependent oxidoreductase GPY04_RS15835 PF00158 Sigma-54 interaction domain GPY04_RS15835 PF00072 Response regulator receiver domain GPY04_RS15835 PF02954 Bacterial regulatory protein, Fis family GPY04_RS15840 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS15840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS15840 PF02743 Cache domain GPY04_RS15860 PF03009 Glycerophosphoryl diester phosphodiesterase family GPY04_RS15870 PF01048 Phosphorylase superfamily GPY04_RS15880 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS15885 PF00294 pfkB family carbohydrate kinase GPY04_RS15890 PF13407 Periplasmic binding protein domain GPY04_RS15895 PF02653 Branched-chain amino acid transport system / permease component GPY04_RS15900 PF00005 ABC transporter GPY04_RS15905 PF05025 RbsD / FucU transport protein family GPY04_RS15920 PF04717 Type VI secretion system, phage-baseplate injector GPY04_RS15920 PF16671 Actin cross-linking domain GPY04_RS15955 PF10431 C-terminal, D2-small domain, of ClpB protein GPY04_RS15955 PF17871 AAA lid domain GPY04_RS15955 PF07724 AAA domain (Cdc48 subfamily) GPY04_RS15955 PF00004 ATPase family associated with various cellular activities (AAA) GPY04_RS16015 PF00849 RNA pseudouridylate synthase GPY04_RS16020 PF00916 Sulfate permease family GPY04_RS16020 PF01740 STAS domain GPY04_RS16025 PF13419 Haloacid dehalogenase-like hydrolase GPY04_RS16030 PF00563 EAL domain GPY04_RS16030 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS16035 PF00581 Rhodanese-like domain GPY04_RS16040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GPY04_RS16040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY04_RS16045 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GPY04_RS16045 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GPY04_RS16055 PF02868 Thermolysin metallopeptidase, alpha-helical domain GPY04_RS16055 PF01483 Proprotein convertase P-domain GPY04_RS16055 PF07504 Fungalysin/Thermolysin Propeptide Motif GPY04_RS16055 PF01447 Thermolysin metallopeptidase, catalytic domain GPY04_RS16075 PF02001 Protein of unknown function DUF134 GPY04_RS16085 PF00375 Sodium:dicarboxylate symporter family GPY04_RS16105 PF09278 MerR, DNA binding GPY04_RS16105 PF00376 MerR family regulatory protein GPY04_RS16110 PF07690 Major Facilitator Superfamily GPY04_RS16115 PF03466 LysR substrate binding domain GPY04_RS16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS16120 PF00563 EAL domain GPY04_RS16120 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS16120 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS16120 PF13188 PAS domain GPY04_RS16125 PF08525 Opacity-associated protein A N-terminal motif GPY04_RS16125 PF01551 Peptidase family M23 GPY04_RS16125 PF01476 LysM domain GPY04_RS16135 PF01740 STAS domain GPY04_RS16135 PF00916 Sulfate permease family GPY04_RS16150 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS16150 PF00563 EAL domain GPY04_RS16150 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS16155 PF00005 ABC transporter GPY04_RS16160 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS16165 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS16170 PF12849 PBP superfamily domain GPY04_RS16175 PF12729 Four helix bundle sensory module for signal transduction GPY04_RS16175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS16175 PF00672 HAMP domain GPY04_RS16195 PF07715 TonB-dependent Receptor Plug Domain GPY04_RS16195 PF00593 TonB dependent receptor GPY04_RS16200 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain GPY04_RS16200 PF00326 Prolyl oligopeptidase family GPY04_RS16205 PF00271 Helicase conserved C-terminal domain GPY04_RS16205 PF00270 DEAD/DEAH box helicase GPY04_RS16215 PF17969 L,D-transpeptidase C-terminal domain GPY04_RS16215 PF01476 LysM domain GPY04_RS16215 PF03734 L,D-transpeptidase catalytic domain GPY04_RS16220 PF03441 FAD binding domain of DNA photolyase GPY04_RS16220 PF00875 DNA photolyase GPY04_RS16225 PF13411 MerR HTH family regulatory protein GPY04_RS16230 PF08349 Protein of unknown function (DUF1722) GPY04_RS16235 PF01048 Phosphorylase superfamily GPY04_RS16250 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS16255 PF11742 Protein of unknown function (DUF3302) GPY04_RS16260 PF00529 HlyD membrane-fusion protein of T1SS GPY04_RS16260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GPY04_RS16275 PF07238 PilZ domain GPY04_RS16275 PF12945 Flagellar protein YcgR GPY04_RS16280 PF03616 Sodium/glutamate symporter GPY04_RS16295 PF02630 SCO1/SenC GPY04_RS16305 PF00375 Sodium:dicarboxylate symporter family GPY04_RS16310 PF01569 PAP2 superfamily GPY04_RS16330 PF00672 HAMP domain GPY04_RS16330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS16330 PF02743 Cache domain GPY04_RS16350 PF00704 Glycosyl hydrolases family 18 GPY04_RS16350 PF08329 Chitinase A, N-terminal domain GPY04_RS16355 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) GPY04_RS16360 PF00939 Sodium:sulfate symporter transmembrane region GPY04_RS16370 PF00842 Alanine racemase, C-terminal domain GPY04_RS16370 PF01168 Alanine racemase, N-terminal domain GPY04_RS16370 PF01757 Acyltransferase family GPY04_RS16395 PF16671 Actin cross-linking domain GPY04_RS16395 PF04717 Type VI secretion system, phage-baseplate injector GPY04_RS16400 PF05638 Type VI secretion system effector, Hcp GPY04_RS16405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY04_RS16405 PF00128 Alpha amylase, catalytic domain GPY04_RS16405 PF02806 Alpha amylase, C-terminal all-beta domain GPY04_RS16410 PF02446 4-alpha-glucanotransferase GPY04_RS16415 PF00343 Carbohydrate phosphorylase GPY04_RS16420 PF17874 MalT-like TPR region GPY04_RS16420 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS16425 PF10928 Protein of unknown function (DUF2810) GPY04_RS16435 PF00672 HAMP domain GPY04_RS16435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS16435 PF17200 Single Cache domain 2 GPY04_RS16440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY04_RS16440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GPY04_RS16445 PF01709 Transcriptional regulator GPY04_RS16470 PF18607 ParA helix turn helix domain GPY04_RS16470 PF13614 AAA domain GPY04_RS16475 PF08775 ParB family GPY04_RS16475 PF02195 ParB-like nuclease domain GPY04_RS16480 PF13416 Bacterial extracellular solute-binding protein GPY04_RS16485 PF13718 GNAT acetyltransferase 2 GPY04_RS16485 PF05127 Helicase GPY04_RS16495 PF00501 AMP-binding enzyme GPY04_RS16515 PF00072 Response regulator receiver domain GPY04_RS16515 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS16520 PF08521 Two-component sensor kinase N-terminal GPY04_RS16520 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS16520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS16525 PF08019 Phosphoethanolamine transferase EptA/EptB GPY04_RS16525 PF00884 Sulfatase GPY04_RS16530 PF00005 ABC transporter GPY04_RS16530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY04_RS16535 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS16535 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY04_RS16540 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS16555 PF00072 Response regulator receiver domain GPY04_RS16560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS16560 PF01584 CheW-like domain GPY04_RS16560 PF09078 CheY binding GPY04_RS16560 PF02895 Signal transducing histidine kinase, homodimeric domain GPY04_RS16560 PF01627 Hpt domain GPY04_RS16565 PF01584 CheW-like domain GPY04_RS16570 PF01584 CheW-like domain GPY04_RS16575 PF02203 Tar ligand binding domain homologue GPY04_RS16575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS16575 PF00672 HAMP domain GPY04_RS16580 PF03705 CheR methyltransferase, all-alpha domain GPY04_RS16580 PF01739 CheR methyltransferase, SAM binding domain GPY04_RS16585 PF03975 CheD chemotactic sensory transduction GPY04_RS16590 PF00072 Response regulator receiver domain GPY04_RS16590 PF01339 CheB methylesterase GPY04_RS16595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS16595 PF02743 Cache domain GPY04_RS16595 PF00672 HAMP domain GPY04_RS16605 PF00072 Response regulator receiver domain GPY04_RS16605 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS16615 PF00005 ABC transporter GPY04_RS16615 PF03412 Peptidase C39 family GPY04_RS16615 PF00664 ABC transporter transmembrane region GPY04_RS16630 PF00529 HlyD membrane-fusion protein of T1SS GPY04_RS16635 PF01243 Pyridoxamine 5'-phosphate oxidase GPY04_RS16635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GPY04_RS16640 PF00072 Response regulator receiver domain GPY04_RS16640 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS16645 PF03781 Sulfatase-modifying factor enzyme 1 GPY04_RS16655 PF12833 Helix-turn-helix domain GPY04_RS16660 PF00171 Aldehyde dehydrogenase family GPY04_RS16660 PF01619 Proline dehydrogenase GPY04_RS16660 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GPY04_RS16660 PF14850 DNA-binding domain of Proline dehydrogenase GPY04_RS16670 PF00474 Sodium:solute symporter family GPY04_RS16680 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS16680 PF00672 HAMP domain GPY04_RS16680 PF02743 Cache domain GPY04_RS16685 PF01037 Lrp/AsnC ligand binding domain GPY04_RS16690 PF00171 Aldehyde dehydrogenase family GPY04_RS16700 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain GPY04_RS16700 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain GPY04_RS16700 PF01276 Orn/Lys/Arg decarboxylase, major domain GPY04_RS16705 PF13520 Amino acid permease GPY04_RS16715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GPY04_RS16720 PF04013 Putative SAM-dependent RNA methyltransferase GPY04_RS16725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS16725 PF03466 LysR substrate binding domain GPY04_RS16730 PF00106 short chain dehydrogenase GPY04_RS16735 PF00672 HAMP domain GPY04_RS16735 PF02743 Cache domain GPY04_RS16735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS16740 PF03466 LysR substrate binding domain GPY04_RS16745 PF13460 NAD(P)H-binding GPY04_RS16775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GPY04_RS16780 PF05068 Mannitol repressor GPY04_RS16785 PF01232 Mannitol dehydrogenase Rossmann domain GPY04_RS16785 PF08125 Mannitol dehydrogenase C-terminal domain GPY04_RS16790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY04_RS16790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY04_RS16790 PF02378 Phosphotransferase system, EIIC GPY04_RS16800 PF04225 Opacity-associated protein A LysM-like domain GPY04_RS16800 PF01551 Peptidase family M23 GPY04_RS16810 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GPY04_RS16810 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GPY04_RS16810 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GPY04_RS16810 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GPY04_RS16815 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS16820 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY04_RS16825 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS16830 PF00005 ABC transporter GPY04_RS16835 PF00793 DAHP synthetase I family GPY04_RS16845 PF00672 HAMP domain GPY04_RS16845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS16860 PF00672 HAMP domain GPY04_RS16860 PF16591 Helical bimodular sensor domain GPY04_RS16860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS16870 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GPY04_RS16870 PF00128 Alpha amylase, catalytic domain GPY04_RS16875 PF02264 LamB porin GPY04_RS16880 PF07148 Maltose operon periplasmic protein precursor (MalM) GPY04_RS16890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GPY04_RS16910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS16910 PF03466 LysR substrate binding domain GPY04_RS16915 PF07681 DoxX GPY04_RS16920 PF00730 HhH-GPD superfamily base excision DNA repair protein GPY04_RS16920 PF06029 AlkA N-terminal domain GPY04_RS16925 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GPY04_RS16925 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GPY04_RS16935 PF03600 Citrate transporter GPY04_RS16940 PF07670 Nucleoside recognition GPY04_RS16945 PF07670 Nucleoside recognition GPY04_RS16950 PF00462 Glutaredoxin GPY04_RS16955 PF00892 EamA-like transporter family GPY04_RS16960 PF13609 Gram-negative porin GPY04_RS16965 PF02566 OsmC-like protein GPY04_RS16970 PF01047 MarR family GPY04_RS16975 PF01557 Fumarylacetoacetate (FAA) hydrolase family GPY04_RS16990 PF12833 Helix-turn-helix domain GPY04_RS16995 PF01810 LysE type translocator GPY04_RS17005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY04_RS17015 PF00664 ABC transporter transmembrane region GPY04_RS17015 PF00005 ABC transporter GPY04_RS17025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GPY04_RS17035 PF03466 LysR substrate binding domain GPY04_RS17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS17040 PF00270 DEAD/DEAH box helicase GPY04_RS17040 PF00271 Helicase conserved C-terminal domain GPY04_RS17045 PF01554 MatE GPY04_RS17050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS17050 PF08447 PAS fold GPY04_RS17055 PF00391 PEP-utilising enzyme, mobile domain GPY04_RS17055 PF02896 PEP-utilising enzyme, TIM barrel domain GPY04_RS17055 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GPY04_RS17060 PF03618 Kinase/pyrophosphorylase GPY04_RS17070 PF01070 FMN-dependent dehydrogenase GPY04_RS17075 PF02652 L-lactate permease GPY04_RS17080 PF03466 LysR substrate binding domain GPY04_RS17080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS17095 PF13426 PAS domain GPY04_RS17095 PF08447 PAS fold GPY04_RS17095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS17100 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY04_RS17105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY04_RS17105 PF00005 ABC transporter GPY04_RS17115 PF13654 AAA domain GPY04_RS17115 PF05362 Lon protease (S16) C-terminal proteolytic domain GPY04_RS17120 PF17200 Single Cache domain 2 GPY04_RS17120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS17120 PF00672 HAMP domain GPY04_RS17130 PF07690 Major Facilitator Superfamily GPY04_RS17140 PF06865 Pyrimidine/purine nucleoside phosphorylase GPY04_RS17145 PF05726 Pirin C-terminal cupin domain GPY04_RS17145 PF02678 Pirin GPY04_RS17155 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS17155 PF00563 EAL domain GPY04_RS17160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS17160 PF03466 LysR substrate binding domain GPY04_RS17180 PF03707 Bacterial signalling protein N terminal repeat GPY04_RS17180 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS17180 PF00563 EAL domain GPY04_RS17195 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS17200 PF01047 MarR family GPY04_RS17205 PF00072 Response regulator receiver domain GPY04_RS17205 PF01584 CheW-like domain GPY04_RS17215 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS17220 PF01906 Putative heavy-metal-binding GPY04_RS17235 PF13302 Acetyltransferase (GNAT) domain GPY04_RS17240 PF00005 ABC transporter GPY04_RS17240 PF08402 TOBE domain GPY04_RS17245 PF01547 Bacterial extracellular solute-binding protein GPY04_RS17250 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS17250 PF14785 Maltose transport system permease protein MalF P2 domain GPY04_RS17255 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS17270 PF00455 DeoR C terminal sensor domain GPY04_RS17270 PF08220 DeoR-like helix-turn-helix domain GPY04_RS17275 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS17275 PF08448 PAS fold GPY04_RS17300 PF00313 'Cold-shock' DNA-binding domain GPY04_RS17310 PF05661 Protein of unknown function (DUF808) GPY04_RS17315 PF05958 tRNA (Uracil-5-)-methyltransferase GPY04_RS17325 PF05656 Protein of unknown function (DUF805) GPY04_RS17335 PF01979 Amidohydrolase family GPY04_RS17340 PF03473 MOSC domain GPY04_RS17340 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY04_RS17340 PF03473 MOSC domain GPY04_RS17340 PF03476 MOSC N-terminal beta barrel domain GPY04_RS17340 PF00111 2Fe-2S iron-sulfur cluster binding domain GPY04_RS17340 PF03476 MOSC N-terminal beta barrel domain GPY04_RS17345 PF02743 Cache domain GPY04_RS17345 PF00672 HAMP domain GPY04_RS17345 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS17375 PF00005 ABC transporter GPY04_RS17380 PF01032 FecCD transport family GPY04_RS17385 PF01497 Periplasmic binding protein GPY04_RS17390 PF02472 Biopolymer transport protein ExbD/TolR GPY04_RS17395 PF01618 MotA/TolQ/ExbB proton channel family GPY04_RS17400 PF03544 Gram-negative bacterial TonB protein C-terminal GPY04_RS17405 PF04055 Radical SAM superfamily GPY04_RS17410 PF06228 Haem utilisation ChuX/HutX GPY04_RS17415 PF01243 Pyridoxamine 5'-phosphate oxidase GPY04_RS17420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS17420 PF00672 HAMP domain GPY04_RS17425 PF13556 PucR C-terminal helix-turn-helix domain GPY04_RS17425 PF17853 GGDEF-like domain GPY04_RS17425 PF05651 Putative sugar diacid recognition GPY04_RS17430 PF02447 GntP family permease GPY04_RS17435 PF02595 Glycerate kinase family GPY04_RS17460 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain GPY04_RS17460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GPY04_RS17465 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GPY04_RS17470 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GPY04_RS17470 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GPY04_RS17475 PF01966 HD domain GPY04_RS17500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GPY04_RS17505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS17505 PF03466 LysR substrate binding domain GPY04_RS17520 PF00155 Aminotransferase class I and II GPY04_RS17525 PF08240 Alcohol dehydrogenase GroES-like domain GPY04_RS17525 PF00107 Zinc-binding dehydrogenase GPY04_RS17570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS17570 PF03466 LysR substrate binding domain GPY04_RS17575 PF00291 Pyridoxal-phosphate dependent enzyme GPY04_RS17590 PF02322 Cytochrome bd terminal oxidase subunit II GPY04_RS17595 PF01654 Cytochrome bd terminal oxidase subunit I GPY04_RS17600 PF00155 Aminotransferase class I and II GPY04_RS17600 PF00392 Bacterial regulatory proteins, gntR family GPY04_RS17605 PF00768 D-alanyl-D-alanine carboxypeptidase GPY04_RS17615 PF03922 OmpW family GPY04_RS17625 PF04151 Bacterial pre-peptidase C-terminal domain GPY04_RS17625 PF01447 Thermolysin metallopeptidase, catalytic domain GPY04_RS17625 PF07504 Fungalysin/Thermolysin Propeptide Motif GPY04_RS17625 PF03413 Peptidase propeptide and YPEB domain GPY04_RS17625 PF02868 Thermolysin metallopeptidase, alpha-helical domain GPY04_RS17630 PF08447 PAS fold GPY04_RS17630 PF13426 PAS domain GPY04_RS17630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS17635 PF12262 Bacterial virulence factor lipase N-terminal GPY04_RS17640 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GPY04_RS17650 PF00128 Alpha amylase, catalytic domain GPY04_RS17655 PF00248 Aldo/keto reductase family GPY04_RS17670 PF00005 ABC transporter GPY04_RS17675 PF12704 MacB-like periplasmic core domain GPY04_RS17675 PF02687 FtsX-like permease family GPY04_RS17675 PF00005 ABC transporter GPY04_RS17690 PF07694 5TMR of 5TMR-LYT GPY04_RS17690 PF06580 Histidine kinase GPY04_RS17690 PF13492 GAF domain GPY04_RS17690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS17695 PF00072 Response regulator receiver domain GPY04_RS17695 PF04397 LytTr DNA-binding domain GPY04_RS17705 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS17710 PF13520 Amino acid permease GPY04_RS17725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GPY04_RS17725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GPY04_RS17730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GPY04_RS17735 PF02566 OsmC-like protein GPY04_RS17740 PF01595 Cyclin M transmembrane N-terminal domain GPY04_RS17740 PF03471 Transporter associated domain GPY04_RS17740 PF00571 CBS domain GPY04_RS17745 PF14602 Hexapeptide repeat of succinyl-transferase GPY04_RS17745 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal GPY04_RS17745 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS17750 PF00892 EamA-like transporter family GPY04_RS17760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS17760 PF03466 LysR substrate binding domain GPY04_RS17780 PF13193 AMP-binding enzyme C-terminal domain GPY04_RS17780 PF00501 AMP-binding enzyme GPY04_RS17785 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GPY04_RS17790 PF01329 Pterin 4 alpha carbinolamine dehydratase GPY04_RS17795 PF00583 Acetyltransferase (GNAT) family GPY04_RS17800 PF00202 Aminotransferase class-III GPY04_RS17805 PF06339 Ectoine synthase GPY04_RS17810 PF00696 Amino acid kinase family GPY04_RS17810 PF13840 ACT domain GPY04_RS17820 PF00118 TCP-1/cpn60 chaperonin family GPY04_RS17825 PF00166 Chaperonin 10 Kd subunit GPY04_RS17830 PF00571 CBS domain GPY04_RS17830 PF01769 Divalent cation transporter GPY04_RS17830 PF03448 MgtE intracellular N domain GPY04_RS17845 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GPY04_RS17845 PF17944 Arginine decarboxylase C-terminal helical extension GPY04_RS17845 PF17810 Arginine decarboxylase helical bundle domain GPY04_RS17850 PF00491 Arginase family GPY04_RS17855 PF04151 Bacterial pre-peptidase C-terminal domain GPY04_RS17855 PF04389 Peptidase family M28 GPY04_RS17860 PF02868 Thermolysin metallopeptidase, alpha-helical domain GPY04_RS17860 PF07504 Fungalysin/Thermolysin Propeptide Motif GPY04_RS17860 PF04151 Bacterial pre-peptidase C-terminal domain GPY04_RS17860 PF03413 Peptidase propeptide and YPEB domain GPY04_RS17860 PF01447 Thermolysin metallopeptidase, catalytic domain GPY04_RS17865 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GPY04_RS17865 PF18416 N-acetylglucosamine binding protein domain 2 GPY04_RS17870 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GPY04_RS17875 PF01575 MaoC like domain GPY04_RS17880 PF12849 PBP superfamily domain GPY04_RS17890 PF00575 S1 RNA binding domain GPY04_RS17890 PF00773 RNB domain GPY04_RS17890 PF08206 Ribonuclease B OB domain GPY04_RS17895 PF03880 DbpA RNA binding domain GPY04_RS17895 PF00271 Helicase conserved C-terminal domain GPY04_RS17895 PF00270 DEAD/DEAH box helicase GPY04_RS17905 PF00884 Sulfatase GPY04_RS17910 PF00294 pfkB family carbohydrate kinase GPY04_RS17925 PF13419 Haloacid dehalogenase-like hydrolase GPY04_RS17935 PF02796 Helix-turn-helix domain of resolvase GPY04_RS17935 PF00239 Resolvase, N terminal domain GPY04_RS17965 PF00226 DnaJ domain GPY04_RS17965 PF00684 DnaJ central domain GPY04_RS17965 PF01556 DnaJ C terminal domain GPY04_RS17980 PF00498 FHA domain GPY04_RS17980 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS17980 PF00563 EAL domain GPY04_RS17985 PF07055 Enoyl reductase FAD binding domain GPY04_RS17985 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase GPY04_RS17985 PF12241 Trans-2-enoyl-CoA reductase catalytic region GPY04_RS17990 PF13472 GDSL-like Lipase/Acylhydrolase family GPY04_RS17995 PF00005 ABC transporter GPY04_RS18005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain GPY04_RS18005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain GPY04_RS18015 PF02626 Carboxyltransferase domain, subdomain A and B GPY04_RS18025 PF03746 LamB/YcsF family GPY04_RS18030 PF16363 GDP-mannose 4,6 dehydratase GPY04_RS18035 PF12729 Four helix bundle sensory module for signal transduction GPY04_RS18035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS18035 PF00672 HAMP domain GPY04_RS18040 PF03222 Tryptophan/tyrosine permease family GPY04_RS18050 PF04336 Acyl carrier protein phosphodiesterase GPY04_RS18055 PF00271 Helicase conserved C-terminal domain GPY04_RS18055 PF00270 DEAD/DEAH box helicase GPY04_RS18060 PF00440 Bacterial regulatory proteins, tetR family GPY04_RS18060 PF08361 MAATS-type transcriptional repressor, C-terminal region GPY04_RS18065 PF00034 Cytochrome c GPY04_RS18070 PF01212 Beta-eliminating lyase GPY04_RS18075 PF00293 NUDIX domain GPY04_RS18080 PF12592 Protein of unknown function (DUF3763) GPY04_RS18080 PF17868 AAA lid domain GPY04_RS18080 PF07728 AAA domain (dynein-related subfamily) GPY04_RS18085 PF05762 VWA domain containing CoxE-like protein GPY04_RS18095 PF00005 ABC transporter GPY04_RS18100 PF00497 Bacterial extracellular solute-binding proteins, family 3 GPY04_RS18105 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS18110 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS18115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS18115 PF03466 LysR substrate binding domain GPY04_RS18140 PF07690 Major Facilitator Superfamily GPY04_RS18145 PF00085 Thioredoxin GPY04_RS18150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GPY04_RS18150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GPY04_RS18155 PF02754 Cysteine-rich domain GPY04_RS18155 PF13183 4Fe-4S dicluster domain GPY04_RS18160 PF00890 FAD binding domain GPY04_RS18165 PF01266 FAD dependent oxidoreductase GPY04_RS18165 PF04324 BFD-like [2Fe-2S] binding domain GPY04_RS18170 PF00230 Major intrinsic protein GPY04_RS18175 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GPY04_RS18175 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GPY04_RS18190 PF04363 Protein of unknown function (DUF496) GPY04_RS18200 PF04337 Protein of unknown function, DUF480 GPY04_RS18205 PF01541 GIY-YIG catalytic domain GPY04_RS18215 PF13407 Periplasmic binding protein domain GPY04_RS18220 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS18220 PF09308 LuxQ, periplasmic GPY04_RS18220 PF00072 Response regulator receiver domain GPY04_RS18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS18265 PF07685 CobB/CobQ-like glutamine amidotransferase domain GPY04_RS18265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GPY04_RS18275 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS18280 PF03459 TOBE domain GPY04_RS18280 PF00005 ABC transporter GPY04_RS18305 PF00072 Response regulator receiver domain GPY04_RS18305 PF13188 PAS domain GPY04_RS18305 PF08448 PAS fold GPY04_RS18305 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS18305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS18310 PF12805 FUSC-like inner membrane protein yccS GPY04_RS18315 PF13361 UvrD-like helicase C-terminal domain GPY04_RS18315 PF00580 UvrD/REP helicase N-terminal domain GPY04_RS18315 PF12462 DNA helicase IV / RNA helicase N terminal GPY04_RS18330 PF01219 Prokaryotic diacylglycerol kinase GPY04_RS18335 PF00857 Isochorismatase family GPY04_RS18340 PF02142 MGS-like domain GPY04_RS18345 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY04_RS18350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS18350 PF00072 Response regulator receiver domain GPY04_RS18350 PF01627 Hpt domain GPY04_RS18350 PF00672 HAMP domain GPY04_RS18350 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS18355 PF02887 Pyruvate kinase, alpha/beta domain GPY04_RS18355 PF00224 Pyruvate kinase, barrel domain GPY04_RS18360 PF07690 Major Facilitator Superfamily GPY04_RS18370 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS18370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS18370 PF02743 Cache domain GPY04_RS18375 PF14532 Sigma-54 interaction domain GPY04_RS18375 PF00072 Response regulator receiver domain GPY04_RS18375 PF02954 Bacterial regulatory protein, Fis family GPY04_RS18385 PF00465 Iron-containing alcohol dehydrogenase GPY04_RS18390 PF06483 Chitinase C GPY04_RS18390 PF00704 Glycosyl hydrolases family 18 GPY04_RS18395 PF00483 Nucleotidyl transferase GPY04_RS18400 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS18400 PF17158 Membrane-associated sensor, integral membrane domain GPY04_RS18415 PF13721 SecD export protein N-terminal TM region GPY04_RS18415 PF07549 SecD/SecF GG Motif GPY04_RS18415 PF02355 Protein export membrane protein GPY04_RS18420 PF02355 Protein export membrane protein GPY04_RS18420 PF07549 SecD/SecF GG Motif GPY04_RS18425 PF00106 short chain dehydrogenase GPY04_RS18430 PF02803 Thiolase, C-terminal domain GPY04_RS18430 PF00108 Thiolase, N-terminal domain GPY04_RS18440 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GPY04_RS18445 PF00005 ABC transporter GPY04_RS18445 PF08402 TOBE domain GPY04_RS18450 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS18460 PF07690 Major Facilitator Superfamily GPY04_RS18465 PF07730 Histidine kinase GPY04_RS18465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS18465 PF05231 MASE1 GPY04_RS18470 PF00072 Response regulator receiver domain GPY04_RS18470 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS18475 PF01966 HD domain GPY04_RS18485 PF03264 NapC/NirT cytochrome c family, N-terminal region GPY04_RS18490 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) GPY04_RS18495 PF00384 Molybdopterin oxidoreductase GPY04_RS18495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain GPY04_RS18495 PF01568 Molydopterin dinucleotide binding domain GPY04_RS18505 PF12838 4Fe-4S dicluster domain GPY04_RS18505 PF13187 4Fe-4S dicluster domain GPY04_RS18510 PF07730 Histidine kinase GPY04_RS18510 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term GPY04_RS18510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS18510 PF00672 HAMP domain GPY04_RS18515 PF00196 Bacterial regulatory proteins, luxR family GPY04_RS18515 PF00072 Response regulator receiver domain GPY04_RS18520 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS18535 PF00474 Sodium:solute symporter family GPY04_RS18540 PF03313 Serine dehydratase alpha chain GPY04_RS18540 PF03315 Serine dehydratase beta chain GPY04_RS18545 PF03606 C4-dicarboxylate anaerobic carrier GPY04_RS18550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS18550 PF00672 HAMP domain GPY04_RS18550 PF12729 Four helix bundle sensory module for signal transduction GPY04_RS18555 PF13419 Haloacid dehalogenase-like hydrolase GPY04_RS18560 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GPY04_RS18560 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GPY04_RS18565 PF13488 Glycine zipper GPY04_RS18565 PF00691 OmpA family GPY04_RS18570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain GPY04_RS18570 PF00672 HAMP domain GPY04_RS18575 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GPY04_RS18575 PF01266 FAD dependent oxidoreductase GPY04_RS18580 PF00294 pfkB family carbohydrate kinase GPY04_RS18585 PF00251 Glycosyl hydrolases family 32 N-terminal domain GPY04_RS18585 PF08244 Glycosyl hydrolases family 32 C terminal GPY04_RS18595 PF02378 Phosphotransferase system, EIIC GPY04_RS18595 PF00367 phosphotransferase system, EIIB GPY04_RS18640 PF07992 Pyridine nucleotide-disulphide oxidoreductase GPY04_RS18640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GPY04_RS18655 PF04143 Sulphur transport GPY04_RS18670 PF00873 AcrB/AcrD/AcrF family GPY04_RS18675 PF00881 Nitroreductase family GPY04_RS18680 PF03992 Antibiotic biosynthesis monooxygenase GPY04_RS18685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS18685 PF03466 LysR substrate binding domain GPY04_RS18695 PF06942 GlpM protein GPY04_RS18710 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GPY04_RS18710 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GPY04_RS18720 PF07516 SecA Wing and Scaffold domain GPY04_RS18720 PF02810 SEC-C motif GPY04_RS18720 PF07517 SecA DEAD-like domain GPY04_RS18720 PF01043 SecA preprotein cross-linking domain GPY04_RS18735 PF00456 Transketolase, thiamine diphosphate binding domain GPY04_RS18735 PF02780 Transketolase, C-terminal domain GPY04_RS18735 PF02779 Transketolase, pyrimidine binding domain GPY04_RS18740 PF00923 Transaldolase/Fructose-6-phosphate aldolase GPY04_RS18750 PF04198 Putative sugar-binding domain GPY04_RS18755 PF00581 Rhodanese-like domain GPY04_RS18765 PF00899 ThiF family GPY04_RS18770 PF03453 MoeA N-terminal region (domain I and II) GPY04_RS18770 PF03454 MoeA C-terminal region (domain IV) GPY04_RS18770 PF00994 Probable molybdopterin binding domain GPY04_RS18775 PF01227 GTP cyclohydrolase I GPY04_RS18780 PF01625 Peptide methionine sulfoxide reductase GPY04_RS18780 PF01641 SelR domain GPY04_RS18785 PF01268 Formate--tetrahydrofolate ligase GPY04_RS18790 PF01741 Large-conductance mechanosensitive channel, MscL GPY04_RS18805 PF13419 Haloacid dehalogenase-like hydrolase GPY04_RS18810 PF14760 Rnk N-terminus GPY04_RS18810 PF01272 Transcription elongation factor, GreA/GreB, C-term GPY04_RS18815 PF13419 Haloacid dehalogenase-like hydrolase GPY04_RS18825 PF00266 Aminotransferase class-V GPY04_RS18835 PF00005 ABC transporter GPY04_RS18840 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS18845 PF07702 UTRA domain GPY04_RS18845 PF00392 Bacterial regulatory proteins, gntR family GPY04_RS18855 PF00854 POT family GPY04_RS18880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY04_RS18885 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS18890 PF12911 N-terminal TM domain of oligopeptide transport permease C GPY04_RS18890 PF00528 Binding-protein-dependent transport system inner membrane component GPY04_RS18895 PF00005 ABC transporter GPY04_RS18895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GPY04_RS18900 PF12804 MobA-like NTP transferase domain GPY04_RS18900 PF00132 Bacterial transferase hexapeptide (six repeats) GPY04_RS18900 PF03479 Plants and Prokaryotes Conserved (PCC) domain GPY04_RS18915 PF02798 Glutathione S-transferase, N-terminal domain GPY04_RS18915 PF00043 Glutathione S-transferase, C-terminal domain GPY04_RS18935 PF03061 Thioesterase superfamily GPY04_RS18945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle GPY04_RS18945 PF12793 Sugar transport-related sRNA regulator N-term GPY04_RS18950 PF00593 TonB dependent receptor GPY04_RS18950 PF07715 TonB-dependent Receptor Plug Domain GPY04_RS18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS18955 PF03466 LysR substrate binding domain GPY04_RS18960 PF13607 Succinyl-CoA ligase like flavodoxin domain GPY04_RS18960 PF13380 CoA binding domain GPY04_RS18960 PF00583 Acetyltransferase (GNAT) family GPY04_RS18970 PF07478 D-ala D-ala ligase C-terminus GPY04_RS18970 PF01820 D-ala D-ala ligase N-terminus GPY04_RS18980 PF01253 Translation initiation factor SUI1 GPY04_RS18985 PF03701 Uncharacterised protein family (UPF0181) GPY04_RS19000 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS19000 PF00072 Response regulator receiver domain GPY04_RS19010 PF02233 NAD(P) transhydrogenase beta subunit GPY04_RS19015 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GPY04_RS19015 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GPY04_RS19015 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GPY04_RS19030 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS19030 PF17158 Membrane-associated sensor, integral membrane domain GPY04_RS19050 PF00990 Diguanylate cyclase, GGDEF domain GPY04_RS19050 PF17151 Periplasmic sensor domain GPY04_RS19085 PF08274 PhnA Zinc-Ribbon GPY04_RS19085 PF03831 PhnA domain GPY04_RS19100 PF03741 Integral membrane protein TerC family GPY04_RS19105 PF00149 Calcineurin-like phosphoesterase GPY04_RS19105 PF02872 5'-nucleotidase, C-terminal domain GPY04_RS19110 PF11398 Protein of unknown function (DUF2813) GPY04_RS19115 PF06496 Protein of unknown function (DUF1097) GPY04_RS19120 PF03466 LysR substrate binding domain GPY04_RS19120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GPY04_RS19125 PF01226 Formate/nitrite transporter GPY04_RS19130 PF04264 YceI-like domain GPY04_RS19135 PF01292 Prokaryotic cytochrome b561 GPY04_RS19145 PF00563 EAL domain GPY04_RS19145 PF10388 EAL-domain associated signalling protein domain GPY04_RS19155 PF09335 SNARE associated Golgi protein GPY04_RS19160 PF02416 mttA/Hcf106 family GPY04_RS19165 PF00486 Transcriptional regulatory protein, C terminal GPY04_RS19165 PF00072 Response regulator receiver domain GPY04_RS19170 PF02702 Osmosensitive K+ channel His kinase sensor domain GPY04_RS19170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS19170 PF13493 Domain of unknown function (DUF4118) GPY04_RS19170 PF00512 His Kinase A (phospho-acceptor) domain GPY04_RS19175 PF10371 Domain of unknown function GPY04_RS19175 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GPY04_RS19175 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GPY04_RS19175 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GPY04_RS19175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GPY04_RS19180 PF02705 K+ potassium transporter GPY04_RS19185 PF01926 50S ribosome-binding GTPase GPY04_RS19190 PF07683 Cobalamin synthesis protein cobW C-terminal domain GPY04_RS19190 PF02492 CobW/HypB/UreG, nucleotide-binding domain GPY04_RS19195 PF00654 Voltage gated chloride channel GPY04_RS19205 PF00155 Aminotransferase class I and II GPY04_RS19210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GPY04_RS19210 PF00072 Response regulator receiver domain GPY04_RS19215 PF13476 AAA domain GPY04_RS19220 PF00149 Calcineurin-like phosphoesterase GPY04_RS19220 PF12320 Type 5 capsule protein repressor C-terminal domain GPY04_RS19225 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family GPY04_RS19225 PF00356 Bacterial regulatory proteins, lacI family GPY04_RS19230 PF00381 PTS HPr component phosphorylation site GPY04_RS19230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 GPY04_RS19235 PF00294 pfkB family carbohydrate kinase GPY04_RS19240 PF02378 Phosphotransferase system, EIIC GPY04_RS19240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit GPY04_RS19245 PF18030 RimK PreATP-grasp domain GPY04_RS19245 PF08443 RimK-like ATP-grasp domain GPY04_RS19250 PF00155 Aminotransferase class I and II GPY04_RS19260 PF03477 ATP cone domain GPY04_RS19260 PF13597 Anaerobic ribonucleoside-triphosphate reductase GPY04_RS19285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily