locus-tag	class	description
FORC55_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FORC55_RS00010	COG0592	DNA-directed DNA polymerase activity
FORC55_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FORC55_RS00020	COG0187	DNA topoisomerase II activity
FORC55_RS00035	COG0071	Belongs to the small heat shock protein (HSP20) family
FORC55_RS00040	COG3977	Valine--pyruvate aminotransferase
FORC55_RS00045	COG0751	glycine-tRNA ligase activity
FORC55_RS00050	COG0752	glycyl-tRNA synthetase alpha subunit
FORC55_RS00055	COG2119	membrane
FORC55_RS00065	COG0425	Belongs to the sulfur carrier protein TusA family
FORC55_RS00075	COG0604	alcohol dehydrogenase
FORC55_RS00085	COG0129	dihydroxy-acid dehydratase activity
FORC55_RS00090	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FORC55_RS00105	COG0606	chelatase, subunit chli
FORC55_RS00110	COG0204	Acyl-transferase
FORC55_RS00115	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FORC55_RS00120	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FORC55_RS00135	COG3084	Protein conserved in bacteria
FORC55_RS00145	COG4326	sporulation control protein
FORC55_RS00150	COG1272	protein, Hemolysin III
FORC55_RS00160	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FORC55_RS00165	COG0569	domain protein
FORC55_RS00170	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FORC55_RS00170	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FORC55_RS00175	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FORC55_RS00180	COG0242	peptide deformylase activity
FORC55_RS00185	COG1652	LysM domain
FORC55_RS00190	COG0758	DNA mediated transformation
FORC55_RS00195	COG2922	Belongs to the Smg family
FORC55_RS00200	COG0551	DNA topoisomerase type I activity
FORC55_RS00205	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FORC55_RS00210	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FORC55_RS00215	COG0009	L-threonylcarbamoyladenylate synthase
FORC55_RS00220	COG0408	coproporphyrinogen oxidase activity
FORC55_RS00225	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FORC55_RS00235	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
FORC55_RS00280	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FORC55_RS00285	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FORC55_RS00295	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FORC55_RS00300	COG2104	thiamine diphosphate biosynthetic process
FORC55_RS00305	COG2022	thiamine diphosphate biosynthetic process
FORC55_RS00310	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FORC55_RS00315	COG0006	proline dipeptidase activity
FORC55_RS00315	COG0006	proline dipeptidase activity
FORC55_RS00335	COG1522	sequence-specific DNA binding
FORC55_RS00340	COG5002	protein histidine kinase activity
FORC55_RS00340	COG5001	Diguanylate cyclase
FORC55_RS00360	COG0589	response to stress
FORC55_RS00370	COG1528	Iron-storage protein
FORC55_RS00380	COG2081	HI0933 family
FORC55_RS00385	COG0840	transmembrane signaling receptor activity
FORC55_RS00395	COG1322	Protein conserved in bacteria
FORC55_RS00400	COG2226	methyltransferase
FORC55_RS00415	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FORC55_RS00420	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FORC55_RS00425	COG0805	protein transport
FORC55_RS00430	COG1858	cytochrome C peroxidase
FORC55_RS00435	COG0534	Mate efflux family protein
FORC55_RS00445	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FORC55_RS00455	COG2937	Belongs to the GPAT DAPAT family
FORC55_RS00460	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
FORC55_RS00465	COG3161	chorismate lyase activity
FORC55_RS00475	COG1580	Controls the rotational direction of flagella during chemotaxis
FORC55_RS00490	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FORC55_RS00500	COG0084	hydrolase, TatD family'
FORC55_RS00515	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FORC55_RS00515	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FORC55_RS00535	COG3078	GTPase activator activity
FORC55_RS00550	COG3071	HemY protein
FORC55_RS00555	COG2959	enzyme of heme biosynthesis
FORC55_RS00560	COG1587	Uroporphyrinogen-III synthase
FORC55_RS00565	COG0181	hydroxymethylbilane synthase activity
FORC55_RS00580	COG1965	Belongs to the frataxin family
FORC55_RS00590	COG0019	diaminopimelate decarboxylase activity
FORC55_RS00595	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FORC55_RS00605	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FORC55_RS00610	COG1011	Hydrolase
FORC55_RS00615	COG2199	diguanylate cyclase activity
FORC55_RS00615	COG2200	EAL domain
FORC55_RS00615	COG3287	FIST C domain
FORC55_RS00635	COG0561	phosphatase activity
FORC55_RS00640	COG2267	carboxylic ester hydrolase activity
FORC55_RS00645	COG1280	lysine exporter protein (LysE YggA)
FORC55_RS00650	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FORC55_RS00655	COG0783	Belongs to the Dps family
FORC55_RS00695	COG0742	ribosomal rna small subunit methyltransferase
FORC55_RS00700	COG0552	protein localization to endoplasmic reticulum
FORC55_RS00705	COG2884	Cell division ATP-binding protein ftsE
FORC55_RS00710	COG2177	Part of the ABC transporter FtsEX involved in
FORC55_RS00715	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FORC55_RS00720	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FORC55_RS00740	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FORC55_RS00745	COG4206	TonB-dependent receptor
FORC55_RS00760	COG1404	Belongs to the peptidase S8 family
FORC55_RS00765	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FORC55_RS00835	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FORC55_RS00840	COG5001	Diguanylate cyclase
FORC55_RS00840	COG3300	MHYT domain
FORC55_RS00850	COG3852	Histidine kinase
FORC55_RS00860	COG0174	glutamine synthetase
FORC55_RS00870	COG1217	gtp-binding protein TYPA
FORC55_RS00875	COG1660	Displays ATPase and GTPase activities
FORC55_RS00880	COG1295	ribonuclease BN
FORC55_RS00885	COG1490	D-aminoacyl-tRNA deacylase activity
FORC55_RS00890	COG0456	acetyltransferase
FORC55_RS00900	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
FORC55_RS00905	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FORC55_RS00910	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FORC55_RS00915	COG3031	protein transport across the cell outer membrane
FORC55_RS00925	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FORC55_RS00930	COG1459	type II secretion system
FORC55_RS00935	COG2165	general secretion pathway protein
FORC55_RS00940	COG2165	general secretion pathway protein
FORC55_RS00945	COG2165	general secretion pathway protein
FORC55_RS00950	COG4795	General secretion pathway protein
FORC55_RS00955	COG3156	type II secretion system protein K
FORC55_RS00960	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FORC55_RS00965	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
FORC55_RS00975	COG1218	3'(2'),5'-bisphosphate nucleotidase
FORC55_RS00980	COG0494	nUDIX hydrolase
FORC55_RS00990	COG1040	competence protein
FORC55_RS00995	COG0596	Alpha beta hydrolase
FORC55_RS01005	COG2183	response to ionizing radiation
FORC55_RS01010	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FORC55_RS01025	COG1129	ABC transporter
FORC55_RS01030	COG1172	Belongs to the binding-protein-dependent transport system permease family
FORC55_RS01035	COG1472	Belongs to the glycosyl hydrolase 3 family
FORC55_RS01060	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FORC55_RS01065	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FORC55_RS01070	COG1758	RNA polymerase activity
FORC55_RS01075	COG0194	GDP metabolic process
FORC55_RS01080	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FORC55_RS01085	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FORC55_RS01105	COG4232	protein-disulfide reductase activity
FORC55_RS01115	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FORC55_RS01120	COG1027	Aspartate ammonia-lyase
FORC55_RS01125	COG3706	GGDEF domain
FORC55_RS01130	COG3030	protein affecting phage T7 exclusion by the F plasmid
FORC55_RS01135	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FORC55_RS01145	COG2205	protein histidine kinase activity
FORC55_RS01150	COG0745	RESPONSE REGULATOR receiver
FORC55_RS01160	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FORC55_RS01165	COG0205	6-phosphofructokinase activity
FORC55_RS01170	COG1494	fructose-1,6-bisphosphatase
FORC55_RS01175	COG3074	FtsZ-dependent cytokinesis
FORC55_RS01180	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FORC55_RS01185	COG0460	homoserine dehydrogenase
FORC55_RS01185	COG0527	aspartate kinase activity
FORC55_RS01190	COG0626	cystathionine gamma-synthase activity
FORC55_RS01195	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
FORC55_RS01200	COG0281	malic enzyme
FORC55_RS01205	COG0254	rRNA binding
FORC55_RS01210	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FORC55_RS01215	COG1609	Transcriptional regulator
FORC55_RS01220	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FORC55_RS01225	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FORC55_RS01230	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FORC55_RS01235	COG1575	Belongs to the MenA family. Type 1 subfamily
FORC55_RS01240	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FORC55_RS01245	COG0534	Mate efflux family protein
FORC55_RS01250	COG0149	triose-phosphate isomerase activity
FORC55_RS01275	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FORC55_RS01280	COG0459	protein refolding
FORC55_RS01290	COG1509	lysine 2,3-aminomutase activity
FORC55_RS01295	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FORC55_RS01305	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
FORC55_RS01310	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FORC55_RS01315	COG1053	succinate dehydrogenase
FORC55_RS01320	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
FORC55_RS01325	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FORC55_RS01330	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FORC55_RS01335	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FORC55_RS01340	COG1045	serine acetyltransferase
FORC55_RS01350	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FORC55_RS01355	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FORC55_RS01360	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FORC55_RS01365	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FORC55_RS01370	COG0137	argininosuccinate synthase activity
FORC55_RS01380	COG0165	Argininosuccinate lyase
FORC55_RS01390	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FORC55_RS01395	COG0678	peroxiredoxin activity
FORC55_RS01395	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FORC55_RS01405	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
FORC55_RS01435	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FORC55_RS01440	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FORC55_RS01450	COG0338	D12 class N6 adenine-specific DNA methyltransferase
FORC55_RS01455	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FORC55_RS01460	COG0546	phosphoglycolate phosphatase activity
FORC55_RS01465	COG0180	Tryptophanyl-tRNA synthetase
FORC55_RS01480	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FORC55_RS01490	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FORC55_RS01500	COG1012	belongs to the aldehyde dehydrogenase family
FORC55_RS01515	COG3954	Phosphoribulokinase
FORC55_RS01525	COG0429	hydrolase of the alpha beta-hydrolase fold
FORC55_RS01535	COG0488	(ABC) transporter
FORC55_RS01540	COG2249	NAD(P)H dehydrogenase (quinone) activity
FORC55_RS01555	COG1047	Peptidyl-prolyl cis-trans
FORC55_RS01565	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FORC55_RS01575	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
FORC55_RS01580	COG3083	sulfuric ester hydrolase activity
FORC55_RS01585	COG0557	exoribonuclease II activity
FORC55_RS01590	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FORC55_RS01595	COG0051	transcription antitermination factor activity, RNA binding
FORC55_RS01600	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FORC55_RS01605	COG0088	Forms part of the polypeptide exit tunnel
FORC55_RS01610	COG0089	rRNA binding
FORC55_RS01615	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FORC55_RS01620	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FORC55_RS01625	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FORC55_RS01630	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FORC55_RS01635	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FORC55_RS01640	COG0255	Belongs to the universal ribosomal protein uL29 family
FORC55_RS01645	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FORC55_RS01650	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FORC55_RS01655	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FORC55_RS01660	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FORC55_RS01665	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FORC55_RS01670	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FORC55_RS01680	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FORC55_RS01685	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FORC55_RS01690	COG1841	ribosomal large subunit assembly
FORC55_RS01700	COG0201	protein transport
FORC55_RS01705	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FORC55_RS01710	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FORC55_RS01715	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FORC55_RS01720	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FORC55_RS01725	COG0202	RNA polymerase activity
FORC55_RS01730	COG0203	ribosomal protein L17
FORC55_RS01740	COG0545	Peptidyl-prolyl cis-trans isomerase
FORC55_RS01745	COG3061	Opacity-associated protein A
FORC55_RS01745	COG3266	domain, Protein
FORC55_RS01750	COG0697	spore germination
FORC55_RS01755	COG2153	protein acetylation
FORC55_RS01760	COG0513	Belongs to the DEAD box helicase family
FORC55_RS01770	COG0737	Belongs to the 5'-nucleotidase family
FORC55_RS01775	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FORC55_RS01775	COG1648	precorrin-2 dehydrogenase activity
FORC55_RS01780	COG0175	sulfate reduction
FORC55_RS01785	COG2895	sulfate adenylyltransferase (ATP) activity
FORC55_RS01790	COG0529	Catalyzes the synthesis of activated sulfate
FORC55_RS01810	COG1136	(ABC) transporter
FORC55_RS01825	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
FORC55_RS01830	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FORC55_RS01835	COG0729	surface antigen
FORC55_RS01845	COG2105	PFAM AIG2 family protein
FORC55_RS01850	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FORC55_RS01865	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FORC55_RS01870	COG0163	prenyltransferase activity
FORC55_RS01880	COG1178	ABC-type Fe3 transport system permease component
FORC55_RS01885	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
FORC55_RS01890	COG3028	Belongs to the UPF0307 family
FORC55_RS01895	COG0312	modulator of DNA gyrase
FORC55_RS01900	COG2239	Acts as a magnesium transporter
FORC55_RS01905	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FORC55_RS01910	COG1660	Displays ATPase and GTPase activities
FORC55_RS01915	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FORC55_RS01920	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FORC55_RS01930	COG1137	ATPase activity
FORC55_RS01935	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
FORC55_RS01950	COG0517	IMP dehydrogenase activity
FORC55_RS01950	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FORC55_RS01965	COG1127	ABC transporter
FORC55_RS01970	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FORC55_RS01975	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FORC55_RS01980	COG2854	intermembrane phospholipid transfer
FORC55_RS01990	COG5007	Belongs to the BolA IbaG family
FORC55_RS01995	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FORC55_RS02005	COG0251	oxidation-reduction process
FORC55_RS02015	COG0540	Belongs to the ATCase OTCase family
FORC55_RS02025	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FORC55_RS02035	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
FORC55_RS02040	COG0564	pseudouridine synthase activity
FORC55_RS02045	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FORC55_RS02050	COG0525	valine-tRNA ligase activity
FORC55_RS02055	COG2927	DNA polymerase III (CHI subunit)
FORC55_RS02060	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FORC55_RS02065	COG0795	lipopolysaccharide-transporting ATPase activity
FORC55_RS02070	COG0795	lipopolysaccharide-transporting ATPase activity
FORC55_RS02085	COG3437	response regulator, receiver
FORC55_RS02130	COG0066	3-isopropylmalate dehydratase activity
FORC55_RS02135	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
FORC55_RS02140	COG0473	3-isopropylmalate dehydrogenase activity
FORC55_RS02165	COG0583	DNA-binding transcription factor activity
FORC55_RS02170	COG1022	Amp-dependent synthetase and ligase
FORC55_RS02175	COG0028	Belongs to the TPP enzyme family
FORC55_RS02180	COG0440	acetolactate synthase activity
FORC55_RS02185	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FORC55_RS02190	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FORC55_RS02195	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FORC55_RS02205	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
FORC55_RS02210	COG3079	Belongs to the UPF0149 family
FORC55_RS02215	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FORC55_RS02220	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FORC55_RS02235	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FORC55_RS02245	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FORC55_RS02255	COG1595	DNA-templated transcription, initiation
FORC55_RS02270	COG3086	response to oxidative stress
FORC55_RS02275	COG0481	GTPase activity
FORC55_RS02285	COG0571	ribonuclease III activity
FORC55_RS02290	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FORC55_RS02295	COG1381	Involved in DNA repair and RecF pathway recombination
FORC55_RS02300	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FORC55_RS02340	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FORC55_RS02345	COG3956	TIGRFAM MazG family protein
FORC55_RS02350	COG0504	CTP synthase activity
FORC55_RS02355	COG0148	phosphopyruvate hydratase activity
FORC55_RS02360	COG0617	tRNA 3'-terminal CCA addition
FORC55_RS02365	COG3409	Peptidoglycan-binding domain 1 protein
FORC55_RS02365	COG3267	Type II secretory pathway component ExeA
FORC55_RS02375	COG4991	sh3 domain protein
FORC55_RS02380	COG0306	phosphate transporter
FORC55_RS02385	COG1392	Phosphate transport regulator
FORC55_RS02390	COG3025	triphosphatase activity
FORC55_RS02395	COG0840	transmembrane signaling receptor activity
FORC55_RS02400	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FORC55_RS02410	COG1538	Outer membrane efflux protein
FORC55_RS02415	COG0494	nUDIX hydrolase
FORC55_RS02420	COG3151	Protein conserved in bacteria
FORC55_RS02430	COG3150	esterase
FORC55_RS02435	COG0187	DNA topoisomerase II activity
FORC55_RS02440	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
FORC55_RS02450	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FORC55_RS02455	COG0237	dephospho-CoA kinase activity
FORC55_RS02465	COG1459	type II secretion system
FORC55_RS02470	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FORC55_RS02495	COG0716	FMN binding
FORC55_RS02500	COG4974	Belongs to the 'phage' integrase family
FORC55_RS02505	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FORC55_RS02510	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FORC55_RS02515	COG0737	Belongs to the 5'-nucleotidase family
FORC55_RS02525	COG2186	Transcriptional regulator
FORC55_RS02530	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FORC55_RS02535	COG0508	dehydrogenase complex catalyzes the overall conversion of
FORC55_RS02540	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FORC55_RS02555	COG3116	cell division
FORC55_RS02560	COG0768	penicillin binding
FORC55_RS02565	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FORC55_RS02570	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FORC55_RS02580	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FORC55_RS02585	COG0772	Belongs to the SEDS family
FORC55_RS02595	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FORC55_RS02600	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FORC55_RS02605	COG0849	cell division
FORC55_RS02610	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FORC55_RS02615	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FORC55_RS02625	COG0653	protein targeting
FORC55_RS02630	COG0494	nUDIX hydrolase
FORC55_RS02635	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FORC55_RS02645	COG0505	Belongs to the CarA family
FORC55_RS02650	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FORC55_RS02690	COG0730	response to heat
FORC55_RS02695	COG0583	DNA-binding transcription factor activity
FORC55_RS02700	COG2860	membrane
FORC55_RS02705	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FORC55_RS02715	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FORC55_RS02725	COG0493	'glutamate synthase
FORC55_RS02730	COG0070	glutamate synthase
FORC55_RS02730	COG0067	glutamate synthase
FORC55_RS02730	COG0069	glutamate synthase activity
FORC55_RS02740	COG0069	glutamate synthase activity
FORC55_RS02740	COG0067	glutamate synthase
FORC55_RS02740	COG0070	glutamate synthase
FORC55_RS02745	COG1242	4 iron, 4 sulfur cluster binding
FORC55_RS02750	COG3706	GGDEF domain
FORC55_RS02750	COG2203	Gaf domain
FORC55_RS02750	COG5001	Diguanylate cyclase
FORC55_RS02750	COG4251	negative regulation of phosphorylation
FORC55_RS02755	COG2198	Histidine kinase
FORC55_RS02755	COG5002	protein histidine kinase activity
FORC55_RS02755	COG0784	Response regulator, receiver
FORC55_RS02760	COG0745	RESPONSE REGULATOR receiver
FORC55_RS02770	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FORC55_RS02790	COG0083	homoserine kinase activity
FORC55_RS02795	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
FORC55_RS02800	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
FORC55_RS02805	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FORC55_RS02810	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FORC55_RS02825	COG1115	amino acid carrier protein
FORC55_RS02830	COG3022	response to hydroperoxide
FORC55_RS02835	COG0084	hydrolase, TatD family'
FORC55_RS02840	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FORC55_RS02850	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
FORC55_RS02855	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
FORC55_RS02860	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
FORC55_RS02865	COG0813	purine-nucleoside phosphorylase activity
FORC55_RS02875	COG0560	Phosphoserine phosphatase
FORC55_RS02885	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
FORC55_RS02890	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FORC55_RS02895	COG1022	Amp-dependent synthetase and ligase
FORC55_RS02910	COG3250	beta-galactosidase activity
FORC55_RS02915	COG1609	Transcriptional regulator
FORC55_RS02920	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FORC55_RS02935	COG0569	domain protein
FORC55_RS02935	COG0189	ligase activity
FORC55_RS02940	COG0456	acetyltransferase
FORC55_RS02950	COG2171	N-acyltransferase activity
FORC55_RS02960	COG3141	response to X-ray
FORC55_RS02980	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
FORC55_RS02985	COG1074	ATP-dependent DNA helicase activity
FORC55_RS02990	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FORC55_RS03000	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FORC55_RS03000	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FORC55_RS03010	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FORC55_RS03015	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FORC55_RS03020	COG2166	iron-sulfur cluster assembly
FORC55_RS03025	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FORC55_RS03030	COG0693	protein deglycase activity
FORC55_RS03035	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FORC55_RS03040	COG3248	Nucleoside-binding outer membrane protein
FORC55_RS03050	COG1595	DNA-templated transcription, initiation
FORC55_RS03060	COG2211	Major facilitator Superfamily
FORC55_RS03065	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FORC55_RS03075	COG2813	Specifically methylates the guanine in position
FORC55_RS03080	COG0271	Belongs to the BolA IbaG family
FORC55_RS03085	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FORC55_RS03090	COG1805	sodium ion transport
FORC55_RS03095	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FORC55_RS03100	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FORC55_RS03105	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
FORC55_RS03110	COG2871	sodium ion transport
FORC55_RS03115	COG1477	protein flavinylation
FORC55_RS03135	COG3706	GGDEF domain
FORC55_RS03140	COG0733	neurotransmitter:sodium symporter activity
FORC55_RS03145	COG3385	transposase activity
FORC55_RS03155	COG0189	ligase activity
FORC55_RS03160	COG4067	protein conserved in archaea
FORC55_RS03160	COG0189	ligase activity
FORC55_RS03165	COG2195	Cleaves the N-terminal amino acid of tripeptides
FORC55_RS03170	COG2252	PERMEase
FORC55_RS03175	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FORC55_RS03180	COG1073	alpha beta
FORC55_RS03190	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FORC55_RS03195	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FORC55_RS03200	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FORC55_RS03205	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FORC55_RS03205	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FORC55_RS03220	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FORC55_RS03225	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FORC55_RS03230	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
FORC55_RS03235	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FORC55_RS03245	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FORC55_RS03250	COG0024	Methionine aminopeptidase
FORC55_RS03255	COG0052	Belongs to the universal ribosomal protein uS2 family
FORC55_RS03260	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FORC55_RS03265	COG0528	UMP kinase activity
FORC55_RS03270	COG0233	cytoplasmic translational termination
FORC55_RS03275	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FORC55_RS03280	COG0575	Belongs to the CDS family
FORC55_RS03285	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FORC55_RS03290	COG0750	zinc metalloprotease
FORC55_RS03300	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FORC55_RS03305	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FORC55_RS03310	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FORC55_RS03315	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FORC55_RS03320	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FORC55_RS03325	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FORC55_RS03330	COG0587	DNA-directed DNA polymerase activity
FORC55_RS03335	COG0825	malonyl-CoA metabolic process
FORC55_RS03340	COG0037	tRNA processing
FORC55_RS03350	COG3479	Phenolic acid decarboxylase
FORC55_RS03355	COG0347	Belongs to the P(II) protein family
FORC55_RS03360	COG3021	interspecies interaction between organisms
FORC55_RS03370	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FORC55_RS03375	COG2226	methyltransferase
FORC55_RS03380	COG0328	RNA-DNA hybrid ribonuclease activity
FORC55_RS03395	COG1960	acyl-CoA dehydrogenase activity
FORC55_RS03400	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FORC55_RS03405	COG0121	glutamine amidotransferase
FORC55_RS03410	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FORC55_RS03415	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FORC55_RS03420	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FORC55_RS03430	COG1187	pseudouridine synthase activity
FORC55_RS03435	COG2840	Smr protein MutS2
FORC55_RS03450	COG3735	TraB family
FORC55_RS03465	COG2608	mercury ion transmembrane transporter activity
FORC55_RS03465	COG2217	Heavy metal translocating P-type atpase
FORC55_RS03470	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FORC55_RS03485	COG1629	transport
FORC55_RS03485	COG4774	siderophore transport
FORC55_RS03490	COG2375	cellular response to nickel ion
FORC55_RS03495	COG3433	isochorismatase activity
FORC55_RS03495	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FORC55_RS03495	COG2226	methyltransferase
FORC55_RS03530	COG0835	chemotaxis
FORC55_RS03530	COG0784	Response regulator, receiver
FORC55_RS03535	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FORC55_RS03540	COG1815	bacterial-type flagellum-dependent cell motility
FORC55_RS03555	COG1749	Flagellar hook protein flgE
FORC55_RS03560	COG4787	bacterial-type flagellum-dependent cell motility
FORC55_RS03570	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
FORC55_RS03575	COG1706	bacterial-type flagellum-dependent cell motility
FORC55_RS03580	COG1705	Flagellar rod assembly protein muramidase FlgJ
FORC55_RS03580	COG3951	Flagellar rod assembly protein muramidase FlgJ
FORC55_RS03595	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FORC55_RS03600	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FORC55_RS03685	COG0012	GTP binding
FORC55_RS03690	COG0193	aminoacyl-tRNA hydrolase activity
FORC55_RS03695	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FORC55_RS03705	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FORC55_RS03710	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
FORC55_RS03715	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FORC55_RS03720	COG2890	protein-(glutamine-N5) methyltransferase activity
FORC55_RS03730	COG2912	Transglutaminase-like superfamily
FORC55_RS03735	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FORC55_RS03740	COG0737	Belongs to the 5'-nucleotidase family
FORC55_RS03745	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FORC55_RS03750	COG2233	PERMEase
FORC55_RS03770	COG1393	Belongs to the ArsC family
FORC55_RS03775	COG4783	chaperone-mediated protein folding
FORC55_RS03790	COG3385	transposase activity
FORC55_RS03800	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FORC55_RS03815	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FORC55_RS03825	COG1876	peptidase activity
FORC55_RS03835	COG1393	Belongs to the ArsC family
FORC55_RS03865	COG2837	iron assimilation
FORC55_RS03870	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FORC55_RS03875	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FORC55_RS03880	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FORC55_RS03885	COG1334	flagellar protein FlaG
FORC55_RS03890	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FORC55_RS03900	COG1516	flagellar protein fliS
FORC55_RS03920	COG1677	Flagellar hook-basal body complex protein FliE
FORC55_RS03930	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FORC55_RS03935	COG1317	bacterial-type flagellum organization
FORC55_RS03960	COG1580	Controls the rotational direction of flagella during chemotaxis
FORC55_RS03985	COG1987	bacterial-type flagellum assembly
FORC55_RS03990	COG1684	flagellar biosynthetic protein fliR
FORC55_RS04005	COG2840	Smr protein MutS2
FORC55_RS04010	COG2890	protein-(glutamine-N5) methyltransferase activity
FORC55_RS04020	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FORC55_RS04025	COG2860	membrane
FORC55_RS04030	COG3101	peptidyl-lysine hydroxylation
FORC55_RS04040	COG0431	NADPH-dependent FMN reductase
FORC55_RS04045	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FORC55_RS04045	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FORC55_RS04050	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FORC55_RS04055	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FORC55_RS04060	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FORC55_RS04065	COG0735	belongs to the Fur family
FORC55_RS04075	COG0583	DNA-binding transcription factor activity
FORC55_RS04085	COG1346	cytolysis
FORC55_RS04100	COG0596	Alpha beta hydrolase
FORC55_RS04105	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
FORC55_RS04110	COG0033	Phosphoglucomutase
FORC55_RS04120	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FORC55_RS04125	COG0372	Belongs to the citrate synthase family
FORC55_RS04130	COG2009	succinate dehydrogenase
FORC55_RS04135	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FORC55_RS04140	COG1053	succinate dehydrogenase
FORC55_RS04150	COG0567	Dehydrogenase, E1 component
FORC55_RS04155	COG0508	dehydrogenase complex catalyzes the overall conversion of
FORC55_RS04160	COG0045	succinate-CoA ligase (ADP-forming) activity
FORC55_RS04170	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FORC55_RS04175	COG1121	(ABC) transporter
FORC55_RS04180	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
FORC55_RS04185	COG4977	sequence-specific DNA binding
FORC55_RS04190	COG1918	ferrous iron import across plasma membrane
FORC55_RS04210	COG0018	arginyl-trna synthetase
FORC55_RS04220	COG1025	Belongs to the peptidase M16 family
FORC55_RS04225	COG2062	phosphohistidine phosphatase, SixA
FORC55_RS04255	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FORC55_RS04260	COG0643	Histidine kinase
FORC55_RS04260	COG2198	Histidine kinase
FORC55_RS04260	COG0784	Response regulator, receiver
FORC55_RS04265	COG2201	protein-glutamate methylesterase activity
FORC55_RS04270	COG1192	Involved in chromosome partitioning
FORC55_RS04280	COG0835	chemotaxis
FORC55_RS04290	COG4133	protoheme IX ABC transporter activity
FORC55_RS04295	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FORC55_RS04300	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FORC55_RS04310	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FORC55_RS04315	COG1138	Cytochrome C-type biogenesis protein
FORC55_RS04320	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FORC55_RS04325	COG4235	cytochrome complex assembly
FORC55_RS04325	COG3088	subunit of a heme lyase
FORC55_RS04335	COG2853	Lipoprotein
FORC55_RS04355	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FORC55_RS04360	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FORC55_RS04365	COG0123	including yeast histone deacetylase and acetoin utilization protein
FORC55_RS04380	COG3083	sulfuric ester hydrolase activity
FORC55_RS04385	COG3082	Protein of unknown function (DUF1414)
FORC55_RS04390	COG3081	Nucleoid-associated protein
FORC55_RS04400	COG1757	Na H antiporter
FORC55_RS04405	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FORC55_RS04410	COG2095	MarC family integral membrane protein
FORC55_RS04415	COG1454	alcohol dehydrogenase
FORC55_RS04415	COG1012	belongs to the aldehyde dehydrogenase family
FORC55_RS04430	COG0659	secondary active sulfate transmembrane transporter activity
FORC55_RS04435	COG1530	ribonuclease E activity
FORC55_RS04450	COG0564	pseudouridine synthase activity
FORC55_RS04455	COG0424	maF-like protein
FORC55_RS04460	COG1399	metal-binding, possibly nucleic acid-binding protein
FORC55_RS04465	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FORC55_RS04470	COG0416	fatty acid biosynthetic process
FORC55_RS04475	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FORC55_RS04485	COG1028	Short-chain dehydrogenase reductase Sdr
FORC55_RS04490	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FORC55_RS04495	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FORC55_RS04500	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FORC55_RS04505	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FORC55_RS04510	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FORC55_RS04520	COG0084	hydrolase, TatD family'
FORC55_RS04525	COG1263	PTS System
FORC55_RS04525	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FORC55_RS04535	COG0733	neurotransmitter:sodium symporter activity
FORC55_RS04550	COG4667	esterase of the alpha-beta hydrolase superfamily
FORC55_RS04560	COG1940	carbohydrate kinase activity
FORC55_RS04565	COG0784	Response regulator, receiver
FORC55_RS04565	COG0835	chemotaxis
FORC55_RS04580	COG2226	methyltransferase
FORC55_RS04595	COG0676	glucose-6-phosphate 1-epimerase activity
FORC55_RS04600	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FORC55_RS04605	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FORC55_RS04615	COG3139	Protein of unknown function (DUF1315)
FORC55_RS04620	COG0252	asparaginase activity
FORC55_RS04625	COG0616	signal peptide processing
FORC55_RS04630	COG1902	pentaerythritol trinitrate reductase activity
FORC55_RS04630	COG0446	pyridine nucleotide-disulphide oxidoreductase
FORC55_RS04635	COG0788	formyltetrahydrofolate deformylase activity
FORC55_RS04645	COG1199	ATP-dependent helicase activity
FORC55_RS04650	COG1214	PFAM Peptidase M22, glycoprotease
FORC55_RS04665	COG0596	Alpha beta hydrolase
FORC55_RS04670	COG0318	PFAM AMP-dependent synthetase and ligase
FORC55_RS04675	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
FORC55_RS04690	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FORC55_RS04695	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
FORC55_RS04700	COG0436	Aminotransferase
FORC55_RS04705	COG1169	isochorismate synthase
FORC55_RS04710	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
FORC55_RS04715	COG0596	Alpha beta hydrolase
FORC55_RS04735	COG3135	benzoate transporter
FORC55_RS04740	COG0477	Major facilitator Superfamily
FORC55_RS04760	COG3015	lipoprotein NlpE involved in copper resistance
FORC55_RS04765	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FORC55_RS04770	COG2894	cell division
FORC55_RS04775	COG0850	regulation of cytokinetic process
FORC55_RS04780	COG3100	YcgL domain-containing protein
FORC55_RS04785	COG2951	lytic endotransglycosylase activity
FORC55_RS04795	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FORC55_RS04800	COG3005	denitrification pathway
FORC55_RS04805	COG0243	molybdopterin cofactor binding
FORC55_RS04825	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FORC55_RS04835	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FORC55_RS04875	COG4589	Belongs to the CDS family
FORC55_RS04885	COG3300	MHYT domain
FORC55_RS04885	COG5001	Diguanylate cyclase
FORC55_RS04900	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FORC55_RS04905	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FORC55_RS04910	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FORC55_RS04915	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FORC55_RS04925	COG4191	Histidine kinase
FORC55_RS04935	COG0544	peptidyl-prolyl cis-trans isomerase activity
FORC55_RS04945	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FORC55_RS04950	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FORC55_RS04955	COG0776	regulation of translation
FORC55_RS04960	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FORC55_RS04965	COG1555	photosystem II stabilization
FORC55_RS04970	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FORC55_RS04975	COG0539	negative regulation of cytoplasmic translation
FORC55_RS04980	COG0776	regulation of translation
FORC55_RS04985	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
FORC55_RS04990	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FORC55_RS05000	COG0601	transmembrane transport
FORC55_RS05005	COG4239	(ABC) transporter, permease
FORC55_RS05010	COG0747	negative chemotaxis
FORC55_RS05015	COG0444	Belongs to the ABC transporter superfamily
FORC55_RS05020	COG4608	Belongs to the ABC transporter superfamily
FORC55_RS05045	COG0583	DNA-binding transcription factor activity
FORC55_RS05055	COG0686	Belongs to the AlaDH PNT family
FORC55_RS05065	COG1674	ftsk spoiiie
FORC55_RS05070	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FORC55_RS05075	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FORC55_RS05080	COG2186	Transcriptional regulator
FORC55_RS05095	COG0537	adenosine 5'-monophosphoramidase activity
FORC55_RS05120	COG3150	esterase
FORC55_RS05125	COG1252	NADH dehydrogenase
FORC55_RS05150	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FORC55_RS05160	COG4591	ABC-type transport system involved in lipoprotein release permease component
FORC55_RS05165	COG1136	(ABC) transporter
FORC55_RS05170	COG4591	ABC-type transport system involved in lipoprotein release permease component
FORC55_RS05180	COG2333	competence protein COMEC
FORC55_RS05180	COG0658	competence protein
FORC55_RS05185	COG1132	(ABC) transporter
FORC55_RS05190	COG1663	tetraacyldisaccharide 4'-kinase activity
FORC55_RS05195	COG2835	tetraacyldisaccharide 4'-kinase activity
FORC55_RS05200	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FORC55_RS05205	COG2719	SpoVR family
FORC55_RS05210	COG2718	Belongs to the UPF0229 family
FORC55_RS05215	COG2766	serine protein kinase
FORC55_RS05225	COG3013	Belongs to the UPF0304 family
FORC55_RS05235	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FORC55_RS05255	COG1882	Formate acetyltransferase
FORC55_RS05280	COG4160	amino acid transport
FORC55_RS05285	COG0708	Exodeoxyribonuclease III
FORC55_RS05290	COG0840	transmembrane signaling receptor activity
FORC55_RS05300	COG3923	Primosomal replication protein n
FORC55_RS05305	COG0730	response to heat
FORC55_RS05310	COG1199	ATP-dependent helicase activity
FORC55_RS05315	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FORC55_RS05320	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FORC55_RS05325	COG3012	SEC-C Motif Domain Protein
FORC55_RS05330	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FORC55_RS05340	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FORC55_RS05345	COG0215	cysteine-tRNA ligase activity
FORC55_RS05350	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
FORC55_RS05355	COG0632	four-way junction helicase activity
FORC55_RS05365	COG1271	oxidase subunit
FORC55_RS05370	COG1294	oxidase, subunit
FORC55_RS05375	COG4890	Cyd operon protein YbgT
FORC55_RS05380	COG3790	cyd operon protein YbgE
FORC55_RS05385	COG0824	Thioesterase
FORC55_RS05390	COG0811	peptide transport
FORC55_RS05405	COG0823	Involved in the tonB-independent uptake of proteins
FORC55_RS05410	COG2885	chlorophyll binding
FORC55_RS05420	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FORC55_RS05430	COG0784	Response regulator, receiver
FORC55_RS05430	COG5002	protein histidine kinase activity
FORC55_RS05440	COG1012	belongs to the aldehyde dehydrogenase family
FORC55_RS05445	COG3284	Transcriptional regulator
FORC55_RS05450	COG4628	conserved protein (DUF2132)
FORC55_RS05460	COG0415	Belongs to the DNA photolyase family
FORC55_RS05490	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FORC55_RS05500	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FORC55_RS05500	COG3008	intermembrane lipid transfer
FORC55_RS05505	COG2995	paraquat-inducible protein a
FORC55_RS05515	COG1309	transcriptional regulator
FORC55_RS05520	COG1012	belongs to the aldehyde dehydrogenase family
FORC55_RS05540	COG1960	acyl-CoA dehydrogenase activity
FORC55_RS05545	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FORC55_RS05555	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FORC55_RS05565	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FORC55_RS05585	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FORC55_RS05595	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FORC55_RS05600	COG0297	glycogen (starch) synthase activity
FORC55_RS05620	COG3070	regulator of competence-specific genes
FORC55_RS05625	COG1609	Transcriptional regulator
FORC55_RS05635	COG3381	protein complex oligomerization
FORC55_RS05640	COG0745	RESPONSE REGULATOR receiver
FORC55_RS05645	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FORC55_RS05650	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FORC55_RS05655	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
FORC55_RS05660	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
FORC55_RS05670	COG1979	alcohol dehydrogenase
FORC55_RS05675	COG2207	Transcriptional regulator
FORC55_RS05695	COG1032	radical SAM domain protein
FORC55_RS05700	COG0582	viral genome integration into host DNA
FORC55_RS05825	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FORC55_RS06050	COG0612	Peptidase, M16
FORC55_RS06065	COG0583	DNA-binding transcription factor activity
FORC55_RS06070	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FORC55_RS06080	COG2350	Protein conserved in bacteria
FORC55_RS06085	COG1607	acyl-coa hydrolase
FORC55_RS06100	COG1434	Gram-negative-bacterium-type cell wall biogenesis
FORC55_RS06105	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FORC55_RS06120	COG2116	formate transmembrane transporter activity
FORC55_RS06130	COG4459	periplasmic nitrate reductase
FORC55_RS06135	COG3005	denitrification pathway
FORC55_RS06140	COG0243	molybdopterin cofactor binding
FORC55_RS06160	COG1227	inorganic diphosphatase activity
FORC55_RS06175	COG4172	Belongs to the ABC transporter superfamily
FORC55_RS06190	COG4168	peptide transport system, permease
FORC55_RS06200	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FORC55_RS06205	COG1842	Phage shock protein A
FORC55_RS06220	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FORC55_RS06235	COG2818	Glycosylase
FORC55_RS06240	COG0589	response to stress
FORC55_RS06250	COG0626	cystathionine gamma-synthase activity
FORC55_RS06260	COG0733	neurotransmitter:sodium symporter activity
FORC55_RS06265	COG0564	pseudouridine synthase activity
FORC55_RS06270	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FORC55_RS06275	COG4136	ATPase activity
FORC55_RS06280	COG4135	transport system, permease component
FORC55_RS06285	COG4134	Bacterial extracellular solute-binding protein
FORC55_RS06295	COG3313	Fe-S protein
FORC55_RS06305	COG0842	Transport permease protein
FORC55_RS06310	COG1131	(ABC) transporter
FORC55_RS06315	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FORC55_RS06320	COG0814	amino acid
FORC55_RS06330	COG2239	Acts as a magnesium transporter
FORC55_RS06345	COG4934	collagen metabolic process
FORC55_RS06375	COG0840	transmembrane signaling receptor activity
FORC55_RS06390	COG4251	negative regulation of phosphorylation
FORC55_RS06390	COG5001	Diguanylate cyclase
FORC55_RS06390	COG3706	GGDEF domain
FORC55_RS06390	COG2203	Gaf domain
FORC55_RS06395	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
FORC55_RS06420	COG1061	Type III restriction enzyme res subunit
FORC55_RS06425	COG1187	pseudouridine synthase activity
FORC55_RS06430	COG2814	Major facilitator Superfamily
FORC55_RS06440	COG0702	epimerase
FORC55_RS06445	COG0534	Mate efflux family protein
FORC55_RS06450	COG4181	ATPase activity
FORC55_RS06455	COG0577	efflux transmembrane transporter activity
FORC55_RS06465	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
FORC55_RS06480	COG1748	Saccharopine dehydrogenase
FORC55_RS06495	COG1538	Outer membrane efflux protein
FORC55_RS06520	COG0583	DNA-binding transcription factor activity
FORC55_RS06530	COG1451	nucleotide metabolic process
FORC55_RS06545	COG3063	Type IV pilus biogenesis stability protein PilW
FORC55_RS06550	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FORC55_RS06570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FORC55_RS06585	COG3290	protein histidine kinase activity
FORC55_RS06590	COG4565	transcriptional regulatory protein
FORC55_RS06600	COG0784	Response regulator, receiver
FORC55_RS06600	COG0835	chemotaxis
FORC55_RS06645	COG1085	galactose-1-phosphate uridylyltransferase
FORC55_RS06650	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
FORC55_RS06655	COG2017	converts alpha-aldose to the beta-anomer
FORC55_RS06665	COG2199	diguanylate cyclase activity
FORC55_RS06665	COG2200	EAL domain
FORC55_RS06680	COG3527	Alpha-acetolactate decarboxylase
FORC55_RS06695	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FORC55_RS06720	COG3097	Belongs to the UPF0267 family
FORC55_RS06750	COG1271	oxidase subunit
FORC55_RS06755	COG1294	oxidase, subunit
FORC55_RS06760	COG4591	ABC-type transport system involved in lipoprotein release permease component
FORC55_RS06760	COG1136	(ABC) transporter
FORC55_RS06790	COG2723	6-phospho-beta-galactosidase activity
FORC55_RS06795	COG1609	Transcriptional regulator
FORC55_RS06800	COG0251	oxidation-reduction process
FORC55_RS06805	COG2731	YhcH YjgK YiaL family protein
FORC55_RS06810	COG0584	glycerophosphoryl diester phosphodiesterase
FORC55_RS06815	COG1349	DNA-binding transcription factor activity
FORC55_RS06820	COG3842	ATPase activity
FORC55_RS06825	COG0395	ABC-type sugar transport system, permease component
FORC55_RS06830	COG1175	transmembrane transport
FORC55_RS06845	COG0811	peptide transport
FORC55_RS06850	COG0811	peptide transport
FORC55_RS06855	COG0848	biopolymer transport protein
FORC55_RS06860	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FORC55_RS06875	COG1793	dna ligase
FORC55_RS06885	COG0534	Mate efflux family protein
FORC55_RS06905	COG0791	NLP P60 protein
FORC55_RS06910	COG0840	transmembrane signaling receptor activity
FORC55_RS06920	COG3148	PFAM DTW domain containing protein
FORC55_RS06930	COG1940	carbohydrate kinase activity
FORC55_RS06940	COG0303	'Molybdopterin
FORC55_RS06945	COG0746	molybdenum cofactor guanylyltransferase activity
FORC55_RS06950	COG3842	ATPase activity
FORC55_RS06955	COG4662	Binding-protein-dependent transport system inner membrane component
FORC55_RS06965	COG2204	response regulator
FORC55_RS06970	COG3852	Histidine kinase
FORC55_RS06975	COG0488	(ABC) transporter
FORC55_RS06980	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FORC55_RS07010	COG3383	formate dehydrogenase (NAD+) activity
FORC55_RS07010	COG0243	molybdopterin cofactor binding
FORC55_RS07015	COG0437	4 iron, 4 sulfur cluster binding
FORC55_RS07030	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FORC55_RS07035	COG1666	GTP binding
FORC55_RS07040	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FORC55_RS07055	COG2996	Protein conserved in bacteria
FORC55_RS07065	COG3008	intermembrane lipid transfer
FORC55_RS07070	COG2995	paraquat-inducible protein a
FORC55_RS07075	COG1132	(ABC) transporter
FORC55_RS07080	COG1956	GAF domain-containing protein
FORC55_RS07085	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
FORC55_RS07100	COG0308	aminopeptidase N
FORC55_RS07115	COG0167	dihydroorotate dehydrogenase activity
FORC55_RS07125	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FORC55_RS07125	COG0116	Belongs to the methyltransferase superfamily
FORC55_RS07135	COG0488	(ABC) transporter
FORC55_RS07150	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FORC55_RS07155	COG1067	ATP-dependent peptidase activity
FORC55_RS07160	COG3120	sequence-specific DNA binding
FORC55_RS07245	COG2994	toxin metabolic process
FORC55_RS07280	COG2205	protein histidine kinase activity
FORC55_RS07280	COG0784	Response regulator, receiver
FORC55_RS07295	COG3278	Belongs to the heme-copper respiratory oxidase family
FORC55_RS07310	COG2010	Cytochrome c
FORC55_RS07320	COG2217	Heavy metal translocating P-type atpase
FORC55_RS07335	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FORC55_RS07340	COG0589	response to stress
FORC55_RS07345	COG0037	tRNA processing
FORC55_RS07365	COG3842	ATPase activity
FORC55_RS07375	COG1177	transmembrane transport
FORC55_RS07385	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FORC55_RS07400	COG1115	amino acid carrier protein
FORC55_RS07405	COG1280	lysine exporter protein (LysE YggA)
FORC55_RS07445	COG3501	Rhs element vgr protein
FORC55_RS07455	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
FORC55_RS07465	COG2814	Major facilitator Superfamily
FORC55_RS07470	COG1566	PFAM secretion protein HlyD family protein
FORC55_RS07475	COG1538	Outer membrane efflux protein
FORC55_RS07485	COG0513	Belongs to the DEAD box helicase family
FORC55_RS07515	COG0477	Major facilitator Superfamily
FORC55_RS07520	COG0583	DNA-binding transcription factor activity
FORC55_RS07530	COG0402	S-adenosylhomocysteine deaminase activity
FORC55_RS07535	COG0095	Lipoate-protein ligase
FORC55_RS07540	COG0443	Heat shock 70 kDa protein
FORC55_RS07550	COG1643	Atp-dependent helicase
FORC55_RS07590	COG0443	Heat shock 70 kDa protein
FORC55_RS07595	COG0443	Heat shock 70 kDa protein
FORC55_RS07600	COG3706	GGDEF domain
FORC55_RS07630	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FORC55_RS07635	COG0602	queuosine metabolic process
FORC55_RS07640	COG0561	phosphatase activity
FORC55_RS07650	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FORC55_RS07655	COG4597	amino acid ABC transporter
FORC55_RS07660	COG0765	amino acid transport
FORC55_RS07665	COG1126	abc transporter atp-binding protein
FORC55_RS07670	COG0670	Belongs to the BI1 family
FORC55_RS07675	COG2920	part of a sulfur-relay system
FORC55_RS07680	COG1254	Belongs to the acylphosphatase family
FORC55_RS07685	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FORC55_RS07690	COG3706	GGDEF domain
FORC55_RS07715	COG3437	response regulator, receiver
FORC55_RS07720	COG0625	glutathione transferase activity
FORC55_RS07730	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FORC55_RS07740	COG2195	Cleaves the N-terminal amino acid of tripeptides
FORC55_RS07770	COG0372	Belongs to the citrate synthase family
FORC55_RS07775	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
FORC55_RS07820	COG1129	ABC transporter
FORC55_RS07855	COG2205	protein histidine kinase activity
FORC55_RS07860	COG3713	MltA-interacting MipA family protein
FORC55_RS07865	COG2990	Protein conserved in bacteria
FORC55_RS07875	COG2205	protein histidine kinase activity
FORC55_RS07880	COG0471	metal ion transport
FORC55_RS07890	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FORC55_RS07905	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FORC55_RS07915	COG3768	UPF0283 membrane protein
FORC55_RS07920	COG3106	COG3106 Predicted ATPase
FORC55_RS07935	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FORC55_RS07940	COG0494	nUDIX hydrolase
FORC55_RS07945	COG0814	amino acid
FORC55_RS07950	COG1760	l-serine dehydratase
FORC55_RS07955	COG0720	synthase
FORC55_RS07960	COG0840	transmembrane signaling receptor activity
FORC55_RS07965	COG0017	Asparaginyl-tRNA synthetase
FORC55_RS07970	COG0351	phosphomethylpyrimidine kinase
FORC55_RS07975	COG1448	Aminotransferase
FORC55_RS08000	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
FORC55_RS08005	COG2943	transferase activity, transferring hexosyl groups
FORC55_RS08010	COG1609	Transcriptional regulator
FORC55_RS08015	COG3394	polysaccharide catabolic process
FORC55_RS08020	COG1486	melibiose metabolic process
FORC55_RS08025	COG1447	Phosphotransferase system cellobiose-specific component IIA
FORC55_RS08035	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FORC55_RS08045	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FORC55_RS08050	COG1846	Transcriptional regulator
FORC55_RS08080	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FORC55_RS08095	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FORC55_RS08100	COG3108	Peptidase M15
FORC55_RS08130	COG3385	transposase activity
FORC55_RS08135	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FORC55_RS08145	COG2814	Major facilitator Superfamily
FORC55_RS08155	COG1054	Belongs to the UPF0176 family
FORC55_RS08165	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FORC55_RS08170	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FORC55_RS08175	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FORC55_RS08205	COG0840	transmembrane signaling receptor activity
FORC55_RS08220	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
FORC55_RS08225	COG4139	cobalamin transport
FORC55_RS08230	COG2988	succinylglutamate desuccinylase activity
FORC55_RS08245	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FORC55_RS08250	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FORC55_RS08255	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FORC55_RS08260	COG1823	symporter activity
FORC55_RS08265	COG2925	Exonuclease
FORC55_RS08270	COG1380	Effector of murein hydrolase LrgA
FORC55_RS08275	COG1346	cytolysis
FORC55_RS08315	COG0776	regulation of translation
FORC55_RS08320	COG0072	phenylalanine-tRNA ligase activity
FORC55_RS08320	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FORC55_RS08325	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FORC55_RS08365	COG0322	excinuclease ABC activity
FORC55_RS08370	COG2197	response regulator
FORC55_RS08375	COG0417	DNA replication proofreading
FORC55_RS08380	COG5001	Diguanylate cyclase
FORC55_RS08390	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FORC55_RS08395	COG3099	Belongs to the UPF0263 family
FORC55_RS08410	COG1228	amidohydrolase
FORC55_RS08415	COG0010	Belongs to the arginase family
FORC55_RS08420	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FORC55_RS08425	COG2986	histidine ammonia-lyase
FORC55_RS08445	COG0247	lactate metabolic process
FORC55_RS08445	COG0277	FAD linked oxidase domain protein
FORC55_RS08460	COG2885	chlorophyll binding
FORC55_RS08480	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FORC55_RS08490	COG0281	malic enzyme
FORC55_RS08500	COG2949	membrane
FORC55_RS08505	COG3706	GGDEF domain
FORC55_RS08510	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FORC55_RS08520	COG0492	ferredoxin-NADP+ reductase activity
FORC55_RS08525	COG4988	ABC transporter
FORC55_RS08530	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FORC55_RS08535	COG1187	pseudouridine synthase activity
FORC55_RS08540	COG0009	L-threonylcarbamoyladenylate synthase
FORC55_RS08545	COG0613	PHP domain protein
FORC55_RS08555	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FORC55_RS08560	COG0512	Glutamine amidotransferase of anthranilate synthase
FORC55_RS08565	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FORC55_RS08570	COG0135	phosphoribosylanthranilate isomerase activity
FORC55_RS08570	COG0134	indole-3-glycerol-phosphate synthase activity
FORC55_RS08575	COG0133	tryptophan synthase activity
FORC55_RS08580	COG0159	tryptophan synthase activity
FORC55_RS08590	COG1435	thymidine kinase activity
FORC55_RS08595	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FORC55_RS08600	COG1801	Protein of unknown function DUF72
FORC55_RS08605	COG4106	trans-aconitate 2-methyltransferase activity
FORC55_RS08610	COG0500	methyltransferase
FORC55_RS08615	COG4067	protein conserved in archaea
FORC55_RS08615	COG0189	ligase activity
FORC55_RS08630	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FORC55_RS08640	COG3852	Histidine kinase
FORC55_RS08655	COG3070	regulator of competence-specific genes
FORC55_RS08665	COG2431	L-lysine efflux transmembrane transporter activity
FORC55_RS08675	COG0076	glutamate decarboxylase activity
FORC55_RS08680	COG1737	Transcriptional regulator
FORC55_RS08685	COG1012	belongs to the aldehyde dehydrogenase family
FORC55_RS08685	COG1454	alcohol dehydrogenase
FORC55_RS08690	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FORC55_RS08695	COG3385	transposase activity
FORC55_RS08700	COG3273	potassium ion transport
FORC55_RS08700	COG2985	domain, Protein
FORC55_RS08705	COG0542	response to heat
FORC55_RS08710	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FORC55_RS08715	COG1278	Cold shock
FORC55_RS08720	COG3385	transposase activity
FORC55_RS08730	COG1187	pseudouridine synthase activity
FORC55_RS08735	COG0140	phosphoribosyl-ATP diphosphatase activity
FORC55_RS08735	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FORC55_RS08740	COG0107	imidazoleglycerol-phosphate synthase activity
FORC55_RS08745	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FORC55_RS08750	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FORC55_RS08755	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FORC55_RS08755	COG0131	Imidazoleglycerol-phosphate dehydratase
FORC55_RS08760	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FORC55_RS08765	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FORC55_RS08770	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FORC55_RS08775	COG1757	Na H antiporter
FORC55_RS08780	COG2916	Histone family protein nucleoid-structuring protein H-NS
FORC55_RS08785	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FORC55_RS08790	COG0482	sulfurtransferase activity
FORC55_RS08795	COG2915	High frequency lysogenization protein hflD homolog
FORC55_RS08800	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FORC55_RS08810	COG2268	Band 7 protein
FORC55_RS08820	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FORC55_RS08835	COG0300	oxidoreductase activity
FORC55_RS08845	COG0501	Belongs to the peptidase M48B family
FORC55_RS08855	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FORC55_RS08860	COG2226	methyltransferase
FORC55_RS08865	COG0156	8-amino-7-oxononanoate synthase activity
FORC55_RS08870	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
FORC55_RS08875	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FORC55_RS08880	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FORC55_RS08885	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FORC55_RS08890	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FORC55_RS08895	COG0653	protein targeting
FORC55_RS08900	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FORC55_RS08905	COG2199	diguanylate cyclase activity
FORC55_RS08905	COG2203	Gaf domain
FORC55_RS08915	COG4120	Belongs to the binding-protein-dependent transport system permease family
FORC55_RS08925	COG4628	conserved protein (DUF2132)
FORC55_RS08930	COG3092	negative regulation of chromosome organization
FORC55_RS08935	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FORC55_RS08940	COG0280	phosphate acetyltransferase
FORC55_RS08940	COG0857	belongs to the CobB CobQ family
FORC55_RS08945	COG0435	Glutathione S-transferase
FORC55_RS08950	COG4608	Belongs to the ABC transporter superfamily
FORC55_RS08955	COG0444	Belongs to the ABC transporter superfamily
FORC55_RS08960	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FORC55_RS08965	COG0601	transmembrane transport
FORC55_RS08985	COG2204	response regulator
FORC55_RS08990	COG3300	MHYT domain
FORC55_RS08990	COG5001	Diguanylate cyclase
FORC55_RS08995	COG4191	Histidine kinase
FORC55_RS09000	COG5002	protein histidine kinase activity
FORC55_RS09010	COG2201	protein-glutamate methylesterase activity
FORC55_RS09025	COG0009	L-threonylcarbamoyladenylate synthase
FORC55_RS09045	COG1881	PFAM PEBP family protein
FORC55_RS09070	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FORC55_RS09075	COG0640	Transcriptional regulator
FORC55_RS09085	COG3706	GGDEF domain
FORC55_RS09105	COG1946	Acyl-CoA thioesterase
FORC55_RS09110	COG1522	sequence-specific DNA binding
FORC55_RS09120	COG0616	signal peptide processing
FORC55_RS09125	COG1028	Short-chain dehydrogenase reductase Sdr
FORC55_RS09140	COG2983	Belongs to the UPF0260 family
FORC55_RS09150	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FORC55_RS09155	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FORC55_RS09165	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FORC55_RS09170	COG2832	Protein of unknown function (DUF454)
FORC55_RS09180	COG0745	RESPONSE REGULATOR receiver
FORC55_RS09185	COG0583	DNA-binding transcription factor activity
FORC55_RS09190	COG0778	Nitroreductase
FORC55_RS09195	COG1250	3-hydroxyacyl-CoA dehydrogenase
FORC55_RS09195	COG1024	Enoyl-CoA hydratase
FORC55_RS09200	COG0183	Belongs to the thiolase family
FORC55_RS09220	COG2067	long-chain fatty acid transport protein
FORC55_RS09225	COG2067	long-chain fatty acid transport protein
FORC55_RS09230	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FORC55_RS09235	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
FORC55_RS09240	COG2982	Protein involved in outer membrane biogenesis
FORC55_RS09245	COG0572	uridine kinase
FORC55_RS09255	COG0489	protein tyrosine kinase activity
FORC55_RS09260	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FORC55_RS09260	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FORC55_RS09270	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
FORC55_RS09285	COG0517	IMP dehydrogenase activity
FORC55_RS09285	COG0617	tRNA 3'-terminal CCA addition
FORC55_RS09285	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FORC55_RS09290	COG2199	diguanylate cyclase activity
FORC55_RS09295	COG0314	molybdopterin synthase activity
FORC55_RS09300	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FORC55_RS09305	COG0315	cyclic pyranopterin monophosphate synthase activity
FORC55_RS09310	COG0521	Mo-molybdopterin cofactor biosynthetic process
FORC55_RS09315	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FORC55_RS09320	COG0391	Required for morphogenesis under gluconeogenic growth conditions
FORC55_RS09325	COG2198	Histidine kinase
FORC55_RS09330	COG2204	response regulator
FORC55_RS09340	COG0556	nucleotide-excision repair
FORC55_RS09350	COG4657	Part of a membrane complex involved in electron transport
FORC55_RS09355	COG2878	Part of a membrane complex involved in electron transport
FORC55_RS09360	COG4656	Part of a membrane complex involved in electron transport
FORC55_RS09375	COG4660	Part of a membrane complex involved in electron transport
FORC55_RS09380	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FORC55_RS09385	COG0346	lactoylglutathione lyase activity
FORC55_RS09400	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FORC55_RS09405	COG2056	Na+-H+ antiporter family
FORC55_RS09410	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
FORC55_RS09415	COG1286	toxin biosynthetic process
FORC55_RS09420	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
FORC55_RS09425	COG0285	dihydrofolate synthase activity
FORC55_RS09430	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FORC55_RS09435	COG0101	tRNA pseudouridine synthase activity
FORC55_RS09450	COG2190	(PTS) system
FORC55_RS09450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FORC55_RS09450	COG1263	PTS System
FORC55_RS09455	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FORC55_RS09460	COG1940	carbohydrate kinase activity
FORC55_RS09460	COG1846	Transcriptional regulator
FORC55_RS09465	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FORC55_RS09465	COG4651	solute:proton antiporter activity
FORC55_RS09470	COG0367	asparagine synthase
FORC55_RS09485	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FORC55_RS09490	COG0563	adenylate kinase activity
FORC55_RS09495	COG0326	Molecular chaperone. Has ATPase activity
FORC55_RS09500	COG3710	Transcriptional regulator
FORC55_RS09515	COG0622	Phosphoesterase
FORC55_RS09520	COG1090	epimerase
FORC55_RS09525	COG0300	oxidoreductase activity
FORC55_RS09530	COG3118	belongs to the thioredoxin family
FORC55_RS09535	COG0330	HflC and HflK could
FORC55_RS09540	COG1585	Membrane protein implicated in regulation of membrane protease activity
FORC55_RS09545	COG0789	Transcriptional regulator
FORC55_RS09560	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FORC55_RS09565	COG3115	cell septum assembly
FORC55_RS09570	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
FORC55_RS09575	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FORC55_RS09585	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FORC55_RS09595	COG2190	(PTS) system
FORC55_RS09600	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FORC55_RS09605	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FORC55_RS09610	COG1702	phosphate starvation-inducible protein PhoH
FORC55_RS09615	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FORC55_RS09620	COG4535	Mg2 and Co2 transporter CorC
FORC55_RS09625	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FORC55_RS09630	COG2888	peptidyl-tyrosine sulfation
FORC55_RS09635	COG0495	leucyl-tRNA aminoacylation
FORC55_RS09640	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
FORC55_RS09645	COG1466	dna polymerase III delta subunit
FORC55_RS09650	COG0799	negative regulation of ribosome biogenesis
FORC55_RS09655	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FORC55_RS09660	COG0768	penicillin binding
FORC55_RS09665	COG0772	Belongs to the SEDS family
FORC55_RS09670	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
FORC55_RS09675	COG1686	Belongs to the peptidase S11 family
FORC55_RS09680	COG2921	Belongs to the UPF0250 family
FORC55_RS09685	COG0321	lipoyl(octanoyl) transferase activity
FORC55_RS09690	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FORC55_RS09700	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FORC55_RS09725	COG1596	polysaccharide export
FORC55_RS09735	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FORC55_RS09765	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
FORC55_RS09775	COG0438	transferase activity, transferring glycosyl groups
FORC55_RS09785	COG1045	serine acetyltransferase
FORC55_RS09805	COG1045	serine acetyltransferase
FORC55_RS09810	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FORC55_RS09815	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FORC55_RS09820	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FORC55_RS09825	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FORC55_RS09855	COG0366	Alpha amylase catalytic
FORC55_RS09860	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FORC55_RS09860	COG1263	PTS System
FORC55_RS09865	COG1609	Transcriptional regulator
FORC55_RS09870	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FORC55_RS09875	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FORC55_RS09880	COG2011	ABC-type metal ion transport system permease component
FORC55_RS09885	COG1464	Belongs to the NlpA lipoprotein family
FORC55_RS09890	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
FORC55_RS09900	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FORC55_RS09900	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FORC55_RS09915	COG1611	Belongs to the LOG family
FORC55_RS09920	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FORC55_RS09925	COG2363	Small membrane protein
FORC55_RS09930	COG0583	DNA-binding transcription factor activity
FORC55_RS09935	COG0301	tRNA thio-modification
FORC55_RS09935	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FORC55_RS09945	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
FORC55_RS09950	COG1722	exodeoxyribonuclease VII activity
FORC55_RS09955	COG0142	geranyltranstransferase activity
FORC55_RS09960	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FORC55_RS09965	COG0564	pseudouridine synthase activity
FORC55_RS09970	COG3098	single-species biofilm formation
FORC55_RS09985	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FORC55_RS09995	COG1671	Belongs to the UPF0178 family
FORC55_RS10000	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FORC55_RS10005	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FORC55_RS10010	COG0254	rRNA binding
FORC55_RS10015	COG1720	tRNA m6t6A37 methyltransferase activity
FORC55_RS10020	COG0442	prolyl-tRNA aminoacylation
FORC55_RS10045	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FORC55_RS10045	COG0047	phosphoribosylformylglycinamidine synthase activity
FORC55_RS10055	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
FORC55_RS10065	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
FORC55_RS10100	COG0484	heat shock protein binding
FORC55_RS10105	COG0443	Heat shock 70 kDa protein
FORC55_RS10110	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FORC55_RS10115	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FORC55_RS10120	COG0497	DNA recombination
FORC55_RS10125	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FORC55_RS10130	COG2914	Belongs to the UPF0125 (RnfH) family
FORC55_RS10135	COG2867	negative regulation of translational initiation
FORC55_RS10140	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FORC55_RS10180	COG1518	maintenance of DNA repeat elements
FORC55_RS10195	COG3501	Rhs element vgr protein
FORC55_RS10220	COG2433	Pfam Transposase IS66
FORC55_RS10275	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
FORC55_RS10280	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FORC55_RS10285	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FORC55_RS10305	COG3051	citrate lyase alpha subunit
FORC55_RS10310	COG2301	Belongs to the HpcH HpaI aldolase family
FORC55_RS10315	COG3052	prosthetic group binding
FORC55_RS10320	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
FORC55_RS10330	COG3630	sodium ion export across plasma membrane
FORC55_RS10335	COG0511	ligase activity, forming carbon-carbon bonds
FORC55_RS10335	COG5016	pyruvate
FORC55_RS10340	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
FORC55_RS10350	COG4565	transcriptional regulatory protein
FORC55_RS10365	COG0583	DNA-binding transcription factor activity
FORC55_RS10375	COG1115	amino acid carrier protein
FORC55_RS10380	COG2977	Belongs to the P-Pant transferase superfamily
FORC55_RS10385	COG1120	ATPase activity
FORC55_RS10390	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FORC55_RS10395	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FORC55_RS10400	COG4592	Periplasmic binding protein
FORC55_RS10410	COG1028	Short-chain dehydrogenase reductase Sdr
FORC55_RS10415	COG1169	isochorismate synthase
FORC55_RS10420	COG1021	2,3-dihydroxybenzoate-AMP ligase
FORC55_RS10425	COG3433	isochorismatase activity
FORC55_RS10425	COG1535	isochorismatase
FORC55_RS10430	COG1584	GPR1 FUN34 yaaH family protein
FORC55_RS10440	COG0519	Catalyzes the synthesis of GMP from XMP
FORC55_RS10440	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FORC55_RS10445	COG0517	IMP dehydrogenase activity
FORC55_RS10445	COG0516	GMP reductase activity
FORC55_RS10450	COG1570	exodeoxyribonuclease VII activity
FORC55_RS10465	COG1160	GTP binding
FORC55_RS10470	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FORC55_RS10475	COG2976	Protein conserved in bacteria
FORC55_RS10480	COG0124	histidyl-tRNA synthetase
FORC55_RS10485	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
FORC55_RS10495	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FORC55_RS10500	COG0105	UTP biosynthetic process
FORC55_RS10505	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FORC55_RS10510	COG2975	iron-sulfur cluster assembly
FORC55_RS10515	COG0633	Ferredoxin
FORC55_RS10535	COG0822	iron-sulfur transferase activity
FORC55_RS10545	COG1959	2 iron, 2 sulfur cluster binding
FORC55_RS10555	COG0483	inositol monophosphate 1-phosphatase activity
FORC55_RS10560	COG3385	transposase activity
FORC55_RS10565	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FORC55_RS10570	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FORC55_RS10575	COG1862	Preprotein translocase
FORC55_RS10585	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FORC55_RS10590	COG0517	IMP dehydrogenase activity
FORC55_RS10600	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FORC55_RS10605	COG0583	DNA-binding transcription factor activity
FORC55_RS10610	COG0450	alkyl hydroperoxide reductase
FORC55_RS10615	COG3142	Participates in the control of copper homeostasis
FORC55_RS10630	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FORC55_RS10635	COG0581	inorganic phosphate transmembrane transporter activity
FORC55_RS10645	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FORC55_RS10650	COG0248	Ppx GppA phosphatase
FORC55_RS10660	COG5002	protein histidine kinase activity
FORC55_RS10665	COG0745	RESPONSE REGULATOR receiver
FORC55_RS10675	COG0826	peptidase U32
FORC55_RS10680	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FORC55_RS10725	COG0542	response to heat
FORC55_RS10730	COG1496	oxidoreductase activity
FORC55_RS10735	COG0564	pseudouridine synthase activity
FORC55_RS10740	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FORC55_RS10745	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FORC55_RS10750	COG1605	Chorismate mutase
FORC55_RS10750	COG0077	Prephenate dehydratase
FORC55_RS10755	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FORC55_RS10760	COG5001	Diguanylate cyclase
FORC55_RS10770	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
FORC55_RS10780	COG0488	(ABC) transporter
FORC55_RS10790	COG1605	Chorismate mutase
FORC55_RS10790	COG0287	Prephenate dehydrogenase
FORC55_RS10795	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FORC55_RS10800	COG3275	phosphorelay sensor kinase activity
FORC55_RS10805	COG3279	Response regulator of the LytR AlgR family
FORC55_RS10815	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
FORC55_RS10820	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FORC55_RS10835	COG1966	Carbon starvation protein
FORC55_RS10840	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FORC55_RS10845	COG1047	Peptidyl-prolyl cis-trans
FORC55_RS10850	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FORC55_RS10860	COG0196	riboflavin kinase activity
FORC55_RS10865	COG0728	peptidoglycan biosynthetic process
FORC55_RS10870	COG0268	Binds directly to 16S ribosomal RNA
FORC55_RS10875	COG0640	Transcriptional regulator
FORC55_RS10880	COG0583	DNA-binding transcription factor activity
FORC55_RS10885	COG1283	sodium-dependent phosphate transmembrane transporter activity
FORC55_RS10895	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FORC55_RS10900	COG0730	response to heat
FORC55_RS10905	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
FORC55_RS10910	COG0494	nUDIX hydrolase
FORC55_RS10920	COG0667	Aldo Keto reductase
FORC55_RS10930	COG2204	response regulator
FORC55_RS10935	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FORC55_RS10955	COG0513	Belongs to the DEAD box helicase family
FORC55_RS11010	COG0840	transmembrane signaling receptor activity
FORC55_RS11065	COG2433	Pfam Transposase IS66
FORC55_RS11095	COG2003	Belongs to the UPF0758 family
FORC55_RS11120	COG0714	Associated with various cellular activities
FORC55_RS11135	COG0629	single-stranded DNA binding
FORC55_RS11150	COG2433	Pfam Transposase IS66
FORC55_RS11170	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FORC55_RS11190	COG3706	GGDEF domain
FORC55_RS11195	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FORC55_RS11205	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FORC55_RS11250	COG2433	Pfam Transposase IS66
FORC55_RS11270	COG0681	Belongs to the peptidase S26 family
FORC55_RS11285	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FORC55_RS11370	COG3550	peptidyl-serine autophosphorylation
FORC55_RS11375	COG3620	sequence-specific DNA binding
FORC55_RS11380	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FORC55_RS11400	COG3153	acetyltransferase
FORC55_RS11405	COG3154	lipid carrier protein
FORC55_RS11415	COG0826	peptidase U32
FORC55_RS11420	COG0826	peptidase U32
FORC55_RS11440	COG1185	polyribonucleotide nucleotidyltransferase activity
FORC55_RS11445	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FORC55_RS11455	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FORC55_RS11460	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FORC55_RS11465	COG0195	Participates in both transcription termination and antitermination
FORC55_RS11470	COG0779	Required for maturation of 30S ribosomal subunits
FORC55_RS11485	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FORC55_RS11500	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FORC55_RS11505	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FORC55_RS11510	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FORC55_RS11515	COG1534	Rna-binding protein
FORC55_RS11520	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FORC55_RS11525	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FORC55_RS11530	COG2027	D-alanyl-D-alanine carboxypeptidase
FORC55_RS11535	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FORC55_RS11540	COG0739	heme binding
FORC55_RS11555	COG0316	Belongs to the HesB IscA family
FORC55_RS11560	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FORC55_RS11565	COG0628	permease
FORC55_RS11570	COG2813	Specifically methylates the guanine in position
FORC55_RS11575	COG2205	protein histidine kinase activity
FORC55_RS11575	COG0784	Response regulator, receiver
FORC55_RS11585	COG0747	negative chemotaxis
FORC55_RS11590	COG0601	transmembrane transport
FORC55_RS11595	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FORC55_RS11600	COG0444	Belongs to the ABC transporter superfamily
FORC55_RS11605	COG4608	Belongs to the ABC transporter superfamily
FORC55_RS11615	COG2971	BadF BadG BcrA BcrD
FORC55_RS11635	COG3842	ATPase activity
FORC55_RS11645	COG1840	ABC-type Fe3 transport system, periplasmic component
FORC55_RS11650	COG0004	ammonium transporteR
FORC55_RS11655	COG0347	Belongs to the P(II) protein family
FORC55_RS11660	COG3112	Uncharacterised protein family (UPF0231)
FORC55_RS11665	COG1049	propionate catabolic process, 2-methylcitrate cycle
FORC55_RS11670	COG1752	Esterase of the alpha-beta hydrolase superfamily
FORC55_RS11675	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FORC55_RS11680	COG1643	Atp-dependent helicase
FORC55_RS11690	COG1489	DNA binding
FORC55_RS11700	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FORC55_RS11710	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FORC55_RS11715	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FORC55_RS11720	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FORC55_RS11725	COG0842	Transport permease protein
FORC55_RS11730	COG1131	(ABC) transporter
FORC55_RS11735	COG0659	secondary active sulfate transmembrane transporter activity
FORC55_RS11740	COG0288	reversible hydration of carbon dioxide
FORC55_RS11760	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
FORC55_RS11765	COG3107	peptidoglycan biosynthetic process
FORC55_RS11770	COG0792	nuclease activity
FORC55_RS11775	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FORC55_RS11780	COG2823	Periplasmic or secreted lipoprotein
FORC55_RS11785	COG2969	positive regulation of protein catabolic process
FORC55_RS11790	COG0625	glutathione transferase activity
FORC55_RS11795	COG2857	Cytochrome c1
FORC55_RS11800	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FORC55_RS11805	COG0723	plastoquinol--plastocyanin reductase activity
FORC55_RS11810	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FORC55_RS11815	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FORC55_RS11820	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FORC55_RS11830	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FORC55_RS11835	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FORC55_RS11840	COG3385	transposase activity
FORC55_RS11845	COG0335	large ribosomal subunit rRNA binding
FORC55_RS11850	COG0336	Belongs to the RNA methyltransferase TrmD family
FORC55_RS11855	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FORC55_RS11860	COG0228	four-way junction DNA binding
FORC55_RS11865	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FORC55_RS11870	COG4137	Cytochrome C assembly protein
FORC55_RS11875	COG4536	flavin adenine dinucleotide binding
FORC55_RS11880	COG1854	S-ribosylhomocysteine lyase activity
FORC55_RS11885	COG2918	glutathione biosynthetic process
FORC55_RS11890	COG0612	Peptidase, M16
FORC55_RS11895	COG1238	metal cluster binding
FORC55_RS11905	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
FORC55_RS11910	COG5016	pyruvate
FORC55_RS11910	COG0511	ligase activity, forming carbon-carbon bonds
FORC55_RS11915	COG3630	sodium ion export across plasma membrane
FORC55_RS11960	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
FORC55_RS11965	COG0527	aspartate kinase activity
FORC55_RS11970	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FORC55_RS11975	COG2137	regulation of response to DNA damage stimulus
FORC55_RS11980	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FORC55_RS11990	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FORC55_RS11995	COG4208	sulfate ABC transporter
FORC55_RS12015	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FORC55_RS12020	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FORC55_RS12025	COG1388	LysM domain
FORC55_RS12025	COG4942	peptidase
FORC55_RS12030	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FORC55_RS12035	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
FORC55_RS12040	COG0585	pseudouridine synthase activity
FORC55_RS12045	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FORC55_RS12050	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FORC55_RS12055	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FORC55_RS12060	COG1968	undecaprenyl-diphosphatase activity
FORC55_RS12065	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FORC55_RS12070	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
FORC55_RS12080	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FORC55_RS12090	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FORC55_RS12095	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FORC55_RS12100	COG1610	YqeY-like protein
FORC55_RS12125	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FORC55_RS12130	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FORC55_RS12135	COG1349	DNA-binding transcription factor activity
FORC55_RS12160	COG1279	arginine transmembrane transporter activity
FORC55_RS12165	COG0668	transmembrane transport
FORC55_RS12175	COG0191	fructose-bisphosphate aldolase activity
FORC55_RS12180	COG0126	phosphoglycerate kinase activity
FORC55_RS12185	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FORC55_RS12190	COG4771	TonB-dependent receptor
FORC55_RS12195	COG0583	DNA-binding transcription factor activity
FORC55_RS12200	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FORC55_RS12205	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FORC55_RS12210	COG3091	SprT-like family
FORC55_RS12215	COG2356	endonuclease I
FORC55_RS12220	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FORC55_RS12225	COG0189	ligase activity
FORC55_RS12230	COG1678	Uncharacterized ACR, COG1678
FORC55_RS12235	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FORC55_RS12240	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FORC55_RS12260	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FORC55_RS12265	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FORC55_RS12270	COG0762	integral membrane protein
FORC55_RS12275	COG1872	DUF167
FORC55_RS12285	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FORC55_RS12290	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FORC55_RS12295	COG2066	Belongs to the glutaminase family
FORC55_RS12300	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FORC55_RS12305	COG1194	a g-specific adenine glycosylase
FORC55_RS12310	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FORC55_RS12315	COG0741	lytic transglycosylase activity
FORC55_RS12340	COG0840	transmembrane signaling receptor activity
FORC55_RS12375	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FORC55_RS12380	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
FORC55_RS12385	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FORC55_RS12390	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FORC55_RS12395	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FORC55_RS12400	COG2967	ApaG domain
FORC55_RS12405	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FORC55_RS12415	COG3610	response to peptide
FORC55_RS12420	COG2966	Psort location CytoplasmicMembrane, score
FORC55_RS12425	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FORC55_RS12430	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FORC55_RS12435	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FORC55_RS12440	COG0142	geranyltranstransferase activity
FORC55_RS12445	COG0531	amino acid
FORC55_RS12450	COG0039	L-malate dehydrogenase activity
FORC55_RS12455	COG1438	arginine binding
FORC55_RS12465	COG2358	TRAP transporter, solute receptor (TAXI family
FORC55_RS12475	COG0589	response to stress
FORC55_RS12500	COG2235	arginine
FORC55_RS12505	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FORC55_RS12510	COG1151	hydroxylamine reductase activity
FORC55_RS12515	COG0312	modulator of DNA gyrase
FORC55_RS12520	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FORC55_RS12525	COG3164	Protein of unknown function
FORC55_RS12535	COG0424	maF-like protein
FORC55_RS12540	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
FORC55_RS12545	COG1792	Involved in formation and maintenance of cell shape
FORC55_RS12550	COG1077	Cell shape determining protein MreB Mrl
FORC55_RS12580	COG2165	general secretion pathway protein
FORC55_RS12585	COG2165	general secretion pathway protein
FORC55_RS12595	COG1459	type II secretion system
FORC55_RS12600	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FORC55_RS12610	COG3409	Peptidoglycan-binding domain 1 protein
FORC55_RS12610	COG3267	Type II secretory pathway component ExeA
FORC55_RS12635	COG2199	diguanylate cyclase activity
FORC55_RS12635	COG2200	EAL domain
FORC55_RS12640	COG0629	single-stranded DNA binding
FORC55_RS12655	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FORC55_RS12665	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FORC55_RS12670	COG0527	aspartate kinase activity
FORC55_RS12675	COG1410	methionine synthase
FORC55_RS12675	COG0646	methionine synthase
FORC55_RS12715	COG0175	sulfate reduction
FORC55_RS12720	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FORC55_RS12725	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FORC55_RS12750	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FORC55_RS12755	COG0735	belongs to the Fur family
FORC55_RS12770	COG0166	Belongs to the GPI family
FORC55_RS12775	COG0432	Pfam Uncharacterised protein family UPF0047
FORC55_RS12780	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FORC55_RS12795	COG0359	binds to the 23S rRNA
FORC55_RS12800	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FORC55_RS12805	COG2965	DNA replication, synthesis of RNA primer
FORC55_RS12810	COG0360	Binds together with S18 to 16S ribosomal RNA
FORC55_RS12820	COG2906	2 iron, 2 sulfur cluster binding
FORC55_RS12825	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FORC55_RS12830	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FORC55_RS12835	COG0049	tRNA binding
FORC55_RS12850	COG2923	Belongs to the DsrF TusC family
FORC55_RS12855	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
FORC55_RS12860	COG2964	Protein conserved in bacteria
FORC55_RS12865	COG0545	Peptidyl-prolyl cis-trans isomerase
FORC55_RS12875	COG2900	Belongs to the SlyX family
FORC55_RS12880	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
FORC55_RS12885	COG0330	HflC and HflK could
FORC55_RS12890	COG0330	HflC and HflK could
FORC55_RS12895	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FORC55_RS12900	COG1923	regulation of RNA biosynthetic process
FORC55_RS12905	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FORC55_RS12910	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FORC55_RS12920	COG0802	atpase or kinase
FORC55_RS12925	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FORC55_RS12970	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FORC55_RS12980	COG0688	phosphatidylethanolamine metabolic process
FORC55_RS12985	COG0471	metal ion transport
FORC55_RS12995	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
FORC55_RS13000	COG4942	peptidase
FORC55_RS13015	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FORC55_RS13020	COG2816	NAD+ diphosphatase activity
FORC55_RS13025	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
FORC55_RS13030	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FORC55_RS13035	COG0085	RNA polymerase activity
FORC55_RS13040	COG0222	ribosome binding
FORC55_RS13045	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FORC55_RS13055	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FORC55_RS13060	COG0250	Participates in transcription elongation, termination and antitermination
FORC55_RS13065	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FORC55_RS13070	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FORC55_RS13095	COG1072	(Pantothenic acid kinase))
FORC55_RS13105	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FORC55_RS13115	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FORC55_RS13165	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FORC55_RS13180	COG3118	belongs to the thioredoxin family
FORC55_RS13185	COG0513	Belongs to the DEAD box helicase family
FORC55_RS13190	COG0248	Ppx GppA phosphatase
FORC55_RS13195	COG0784	Response regulator, receiver
FORC55_RS13195	COG2205	protein histidine kinase activity
FORC55_RS13200	COG2814	Major facilitator Superfamily
FORC55_RS13220	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FORC55_RS13225	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FORC55_RS13230	COG0511	ligase activity, forming carbon-carbon bonds
FORC55_RS13235	COG0439	Biotin carboxylase
FORC55_RS13240	COG2264	protein methyltransferase activity
FORC55_RS13245	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FORC55_RS13250	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FORC55_RS13255	COG1609	Transcriptional regulator
FORC55_RS13270	COG0387	Pfam Sodium calcium exchanger
FORC55_RS13275	COG0129	dihydroxy-acid dehydratase activity
FORC55_RS13280	COG3265	gluconokinase activity
FORC55_RS13290	COG0800	Aldolase
FORC55_RS13310	COG0840	transmembrane signaling receptor activity
FORC55_RS13315	COG1982	Orn Lys Arg decarboxylase major
FORC55_RS13320	COG0531	amino acid
FORC55_RS13325	COG3710	Transcriptional regulator
FORC55_RS13330	COG0789	Transcriptional regulator
FORC55_RS13345	COG0151	Belongs to the GarS family
FORC55_RS13355	COG0776	regulation of translation
FORC55_RS13360	COG1253	flavin adenine dinucleotide binding
FORC55_RS13370	COG3068	Protein conserved in bacteria
FORC55_RS13380	COG1573	uracil-dna glycosylase
FORC55_RS13385	COG0668	transmembrane transport
FORC55_RS13405	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FORC55_RS13415	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FORC55_RS13440	COG1086	Polysaccharide biosynthesis protein
FORC55_RS13455	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FORC55_RS13455	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FORC55_RS13470	COG0110	maltose O-acetyltransferase activity
FORC55_RS13480	COG2089	acid synthase
FORC55_RS13495	COG1083	cytidylyl-transferase
FORC55_RS13500	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FORC55_RS13520	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FORC55_RS13555	COG1519	Transferase
FORC55_RS13585	COG2755	lipolytic protein G-D-S-L family
FORC55_RS13585	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FORC55_RS13590	COG3642	lipopolysaccharide core region biosynthetic process
FORC55_RS13595	COG0859	PFAM glycosyl transferase family 9
FORC55_RS13600	COG0463	Glycosyl transferase, family 2
FORC55_RS13605	COG0859	PFAM glycosyl transferase family 9
FORC55_RS13610	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FORC55_RS13615	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FORC55_RS13625	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FORC55_RS13630	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FORC55_RS13635	COG2003	Belongs to the UPF0758 family
FORC55_RS13640	COG0840	transmembrane signaling receptor activity
FORC55_RS13645	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FORC55_RS13655	COG1309	transcriptional regulator
FORC55_RS13660	COG1560	Kdo2-lipid A biosynthetic process
FORC55_RS13665	COG1560	Kdo2-lipid A biosynthetic process
FORC55_RS13670	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FORC55_RS13675	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FORC55_RS13680	COG1561	YicC-like family, N-terminal region
FORC55_RS13705	COG2856	Zn peptidase
FORC55_RS13725	COG1288	antiporter activity
FORC55_RS13815	COG2862	Uncharacterized protein family, UPF0114
FORC55_RS13825	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FORC55_RS13825	COG1263	PTS System
FORC55_RS13830	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FORC55_RS13850	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FORC55_RS13855	COG1120	ATPase activity
FORC55_RS13860	COG4774	siderophore transport
FORC55_RS13865	COG1132	(ABC) transporter
FORC55_RS13880	COG0514	ATP-dependent DNA helicase (RecQ)
FORC55_RS13885	COG2962	Rard protein
FORC55_RS13890	COG0405	Gamma-glutamyltransferase
FORC55_RS13900	COG1280	lysine exporter protein (LysE YggA)
FORC55_RS13905	COG0210	DNA helicase
FORC55_RS13915	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FORC55_RS13920	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FORC55_RS13935	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FORC55_RS13940	COG0601	transmembrane transport
FORC55_RS13945	COG0747	negative chemotaxis
FORC55_RS14000	COG1309	transcriptional regulator
FORC55_RS14005	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FORC55_RS14010	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FORC55_RS14015	COG2960	long-chain fatty acid transporting porin activity
FORC55_RS14020	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FORC55_RS14025	COG0583	DNA-binding transcription factor activity
FORC55_RS14095	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
FORC55_RS14100	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FORC55_RS14105	COG1739	Uncharacterized protein family UPF0029
FORC55_RS14110	COG1024	Enoyl-CoA hydratase
FORC55_RS14110	COG1250	3-hydroxyacyl-CoA dehydrogenase
FORC55_RS14115	COG0183	Belongs to the thiolase family
FORC55_RS14120	COG0583	DNA-binding transcription factor activity
FORC55_RS14125	COG2814	Major facilitator Superfamily
FORC55_RS14135	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FORC55_RS14140	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FORC55_RS14145	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FORC55_RS14150	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FORC55_RS14155	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FORC55_RS14160	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FORC55_RS14170	COG0356	it plays a direct role in the translocation of protons across the membrane
FORC55_RS14175	COG3312	ion transport
FORC55_RS14180	COG1475	DNA binding
FORC55_RS14185	COG1192	Involved in chromosome partitioning
FORC55_RS14190	COG0357	Ribosomal RNA small subunit methyltransferase G
FORC55_RS14195	COG0445	tRNA wobble uridine modification
FORC55_RS14205	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
FORC55_RS14270	COG2433	Pfam Transposase IS66
FORC55_RS14290	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FORC55_RS14320	COG4974	Belongs to the 'phage' integrase family
FORC55_RS14325	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FORC55_RS14330	COG0706	membrane insertase activity
FORC55_RS14340	COG0594	ribonuclease P activity
FORC55_RS14345	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FORC55_RS14350	COG1126	abc transporter atp-binding protein
FORC55_RS14400	COG0217	transcriptional regulatory protein
FORC55_RS14405	COG2084	Dehydrogenase
FORC55_RS14425	COG2909	trisaccharide binding
FORC55_RS14430	COG0058	SHG alpha-glucan phosphorylase activity
FORC55_RS14435	COG1640	4-alpha-glucanotransferase
FORC55_RS14440	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FORC55_RS14450	COG3501	Rhs element vgr protein
FORC55_RS14485	COG0471	metal ion transport
FORC55_RS14490	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
FORC55_RS14535	COG0671	phosphoesterase, PA-phosphatase related
FORC55_RS14540	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
FORC55_RS14550	COG1999	signal sequence binding
FORC55_RS14565	COG0786	glutamate:sodium symporter activity
FORC55_RS14600	COG0813	purine-nucleoside phosphorylase activity
FORC55_RS14610	COG3272	Protein of unknown function (DUF1722)
FORC55_RS14620	COG0415	Belongs to the DNA photolyase family
FORC55_RS14625	COG1388	LysM domain
FORC55_RS14625	COG1376	ErfK ybiS ycfS ynhG family protein
FORC55_RS14635	COG0513	Belongs to the DEAD box helicase family
FORC55_RS14640	COG1770	oligopeptidase
FORC55_RS14665	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FORC55_RS14670	COG0573	inorganic phosphate transmembrane transporter activity
FORC55_RS14675	COG0581	inorganic phosphate transmembrane transporter activity
FORC55_RS14680	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FORC55_RS14695	COG3314	Sporulation integral membrane protein YlbJ
FORC55_RS14700	COG0659	secondary active sulfate transmembrane transporter activity
FORC55_RS14710	COG0739	heme binding
FORC55_RS14720	COG0583	DNA-binding transcription factor activity
FORC55_RS14725	COG2814	Major facilitator Superfamily
FORC55_RS14760	COG1342	Belongs to the UPF0251 family
FORC55_RS14795	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FORC55_RS14800	COG0673	inositol 2-dehydrogenase activity
FORC55_RS14810	COG2771	luxR family
FORC55_RS14810	COG2200	EAL domain
FORC55_RS14815	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FORC55_RS14825	COG0564	pseudouridine synthase activity
FORC55_RS14895	COG3829	transcription factor binding
FORC55_RS14925	COG3501	Rhs element vgr protein
FORC55_RS14925	COG3409	Peptidoglycan-binding domain 1 protein
FORC55_RS14945	COG2433	Pfam Transposase IS66
FORC55_RS14960	COG1869	D-ribose catabolic process
FORC55_RS14965	COG1129	ABC transporter
FORC55_RS14970	COG1172	Belongs to the binding-protein-dependent transport system permease family
FORC55_RS14975	COG1879	ABC-type sugar transport system periplasmic component
FORC55_RS14980	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FORC55_RS14985	COG1609	Transcriptional regulator
FORC55_RS15010	COG0584	glycerophosphoryl diester phosphodiesterase
FORC55_RS15015	COG2271	Major facilitator Superfamily
FORC55_RS15055	COG0579	oxidoreductase
FORC55_RS15065	COG0242	peptide deformylase activity
FORC55_RS15080	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FORC55_RS15085	COG1609	Transcriptional regulator
FORC55_RS15090	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FORC55_RS15090	COG1017	nitric oxide dioxygenase activity
FORC55_RS15095	COG1320	monovalent cation:proton antiporter activity
FORC55_RS15100	COG2212	antiporter activity
FORC55_RS15105	COG1863	multisubunit Na H antiporter MnhE subunit
FORC55_RS15110	COG0651	ATP synthesis coupled electron transport
FORC55_RS15115	COG1006	Multisubunit Na H antiporter MnhC subunit
FORC55_RS15120	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FORC55_RS15120	COG2111	Na H antiporter
FORC55_RS15130	COG0589	response to stress
FORC55_RS15135	COG0814	amino acid
FORC55_RS15150	COG3530	Putative quorum-sensing-regulated virulence factor
FORC55_RS15160	COG5002	protein histidine kinase activity
FORC55_RS15160	COG5001	Diguanylate cyclase
FORC55_RS15165	COG1278	Cold shock
FORC55_RS15180	COG2304	oxidoreductase activity
FORC55_RS15200	COG0714	Associated with various cellular activities
FORC55_RS15205	COG0840	transmembrane signaling receptor activity
FORC55_RS15220	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FORC55_RS15225	COG2195	Cleaves the N-terminal amino acid of tripeptides
FORC55_RS15235	COG3604	Transcriptional regulator
FORC55_RS15240	COG1017	nitric oxide dioxygenase activity
FORC55_RS15240	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FORC55_RS15245	COG1278	Cold shock
FORC55_RS15250	COG3036	rescue of stalled ribosome
FORC55_RS15260	COG3385	transposase activity
FORC55_RS15280	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FORC55_RS15280	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FORC55_RS15285	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FORC55_RS15295	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FORC55_RS15310	COG0516	GMP reductase activity
FORC55_RS15340	COG0513	Belongs to the DEAD box helicase family
FORC55_RS15345	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
FORC55_RS15350	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FORC55_RS15355	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FORC55_RS15360	COG3437	response regulator, receiver
FORC55_RS15360	COG0784	Response regulator, receiver
FORC55_RS15365	COG4191	Histidine kinase
FORC55_RS15365	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FORC55_RS15375	COG1757	Na H antiporter
FORC55_RS15380	COG2814	Major facilitator Superfamily
FORC55_RS15390	COG3706	GGDEF domain
FORC55_RS15395	COG3240	lipase activity
FORC55_RS15410	COG0840	transmembrane signaling receptor activity
FORC55_RS15415	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
FORC55_RS15420	COG5380	lipid catabolic process
FORC55_RS15445	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FORC55_RS15450	COG4605	iron ion homeostasis
FORC55_RS15455	COG4604	ABC transporter, ATP-binding protein
FORC55_RS15460	COG2207	Transcriptional regulator
FORC55_RS15470	COG3385	transposase activity
FORC55_RS15480	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FORC55_RS15530	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FORC55_RS15535	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FORC55_RS15575	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FORC55_RS15585	COG2433	Pfam Transposase IS66
FORC55_RS15600	COG1484	DNA-dependent DNA replication
FORC55_RS15605	COG4584	PFAM Integrase catalytic
FORC55_RS15675	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
FORC55_RS15685	COG3550	peptidyl-serine autophosphorylation
FORC55_RS15705	COG0745	RESPONSE REGULATOR receiver
FORC55_RS15715	COG3623	hexulose-6-phosphate isomerase
FORC55_RS15720	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
FORC55_RS15725	COG0561	phosphatase activity
FORC55_RS15770	COG0745	RESPONSE REGULATOR receiver
FORC55_RS15775	COG5002	protein histidine kinase activity
FORC55_RS15790	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FORC55_RS15830	COG1686	Belongs to the peptidase S11 family
FORC55_RS15850	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FORC55_RS15850	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FORC55_RS15855	COG0509	glycine decarboxylation via glycine cleavage system
FORC55_RS15860	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FORC55_RS15870	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FORC55_RS15885	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FORC55_RS15890	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FORC55_RS16000	COG3040	lipid binding
FORC55_RS16300	COG2433	Pfam Transposase IS66
FORC55_RS16375	COG1619	proteins homologs of microcin C7 resistance protein MccF
FORC55_RS16465	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FORC55_RS16480	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
FORC55_RS16485	COG2944	sequence-specific DNA binding
FORC55_RS16565	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FORC55_RS16600	COG1484	DNA-dependent DNA replication
FORC55_RS16605	COG4584	PFAM Integrase catalytic
FORC55_RS16690	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FORC55_RS16735	COG2433	Pfam Transposase IS66
FORC55_RS16835	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FORC55_RS16905	COG1328	CTP reductase activity
FORC55_RS16910	COG0602	queuosine metabolic process
FORC55_RS16920	COG0189	ligase activity
FORC55_RS16920	COG4067	protein conserved in archaea
FORC55_RS16925	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FORC55_RS16925	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
FORC55_RS16925	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FORC55_RS16930	COG1105	Belongs to the carbohydrate kinase PfkB family
FORC55_RS16935	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FORC55_RS16935	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FORC55_RS16940	COG1609	Transcriptional regulator
FORC55_RS16945	COG0420	3'-5' exonuclease activity
FORC55_RS16950	COG0419	ATPase involved in DNA repair
FORC55_RS16955	COG0784	Response regulator, receiver
FORC55_RS16955	COG2205	protein histidine kinase activity
FORC55_RS16965	COG2433	Pfam Transposase IS66
FORC55_RS16990	COG0038	chloride channel
FORC55_RS16995	COG0523	cobalamin synthesis protein
FORC55_RS17010	COG2200	EAL domain
FORC55_RS17020	COG3038	cytochrome b561
FORC55_RS17030	COG3385	transposase activity
FORC55_RS17035	COG2116	formate transmembrane transporter activity
FORC55_RS17040	COG0583	DNA-binding transcription factor activity
FORC55_RS17050	COG3593	DNA synthesis involved in DNA repair
FORC55_RS17055	COG0737	Belongs to the 5'-nucleotidase family
FORC55_RS17070	COG2824	Alkylphosphonate utilization operon protein PhnA
FORC55_RS17105	COG2199	diguanylate cyclase activity
FORC55_RS17125	COG3706	GGDEF domain
FORC55_RS17140	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
FORC55_RS17145	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
FORC55_RS17155	COG0745	RESPONSE REGULATOR receiver
FORC55_RS17170	COG3140	Belongs to the UPF0181 family
FORC55_RS17185	COG0023	Translation Initiation Factor
FORC55_RS17205	COG0045	succinate-CoA ligase (ADP-forming) activity
FORC55_RS17205	COG1042	CoA-binding domain protein
FORC55_RS17205	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FORC55_RS17210	COG0583	DNA-binding transcription factor activity
FORC55_RS17235	COG2050	protein possibly involved in aromatic compounds catabolism
FORC55_RS17260	COG0625	glutathione transferase activity
FORC55_RS17275	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FORC55_RS17280	COG4172	Belongs to the ABC transporter superfamily
FORC55_RS17285	COG4239	(ABC) transporter, permease
FORC55_RS17290	COG4174	ABC transporter (Permease)
FORC55_RS17340	COG3842	ATPase activity
FORC55_RS17350	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FORC55_RS17355	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FORC55_RS17360	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FORC55_RS17365	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FORC55_RS17375	COG3842	ATPase activity
FORC55_RS17385	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FORC55_RS17400	COG1175	transmembrane transport
FORC55_RS17405	COG3833	ABC-type maltose transport systems, permease component
FORC55_RS17425	COG1011	Hydrolase
FORC55_RS17435	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
FORC55_RS17440	COG1970	mechanosensitive ion channel activity
FORC55_RS17445	COG2759	Belongs to the formate--tetrahydrofolate ligase family
FORC55_RS17450	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FORC55_RS17450	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FORC55_RS17465	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FORC55_RS17475	COG2897	thiosulfate sulfurtransferase activity
FORC55_RS17485	COG2390	Transcriptional regulator
FORC55_RS17500	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FORC55_RS17525	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FORC55_RS17550	COG0583	DNA-binding transcription factor activity
FORC55_RS17555	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
FORC55_RS17605	COG0446	pyridine nucleotide-disulphide oxidoreductase
FORC55_RS17655	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FORC55_RS17655	COG1263	PTS System
FORC55_RS17660	COG1609	Transcriptional regulator
FORC55_RS17665	COG1621	beta-fructofuranosidase activity
FORC55_RS17670	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FORC55_RS17675	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FORC55_RS17680	COG0840	transmembrane signaling receptor activity
FORC55_RS17690	COG0545	Peptidyl-prolyl cis-trans isomerase
FORC55_RS17695	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FORC55_RS17715	COG3069	C4-dicarboxylate transmembrane transporter activity
FORC55_RS17720	COG1760	l-serine dehydratase
FORC55_RS17725	COG2197	response regulator
FORC55_RS17730	COG3850	Histidine kinase
FORC55_RS17735	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FORC55_RS17745	COG0243	molybdopterin cofactor binding
FORC55_RS17765	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FORC55_RS17770	COG2197	response regulator
FORC55_RS17775	COG3851	Histidine kinase
FORC55_RS17780	COG2271	Major facilitator Superfamily
FORC55_RS17785	COG1840	ABC-type Fe3 transport system, periplasmic component
FORC55_RS17795	COG3842	ATPase activity
FORC55_RS17800	COG3243	poly(R)-hydroxyalkanoic acid synthase
FORC55_RS17810	COG0183	Belongs to the thiolase family
FORC55_RS17825	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FORC55_RS17830	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FORC55_RS17850	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FORC55_RS17860	COG1979	alcohol dehydrogenase
FORC55_RS17875	COG4191	Histidine kinase
FORC55_RS17885	COG2271	Major facilitator Superfamily
FORC55_RS17890	COG0469	pyruvate kinase activity
FORC55_RS17895	COG0784	Response regulator, receiver
FORC55_RS17895	COG2205	protein histidine kinase activity
FORC55_RS17895	COG2198	Histidine kinase
FORC55_RS17900	COG1879	ABC-type sugar transport system periplasmic component
FORC55_RS17905	COG1803	Methylglyoxal synthase
FORC55_RS17910	COG1335	isochorismatase
FORC55_RS17915	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FORC55_RS17920	COG0210	DNA helicase
FORC55_RS17925	COG1289	transmembrane transporter activity
FORC55_RS17955	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
FORC55_RS17960	COG4149	molybdate abc transporter
FORC55_RS17965	COG0725	ABC transporter, periplasmic molybdate-binding protein
FORC55_RS17970	COG1492	cobalamin metabolic process
FORC55_RS18005	COG0784	Response regulator, receiver
FORC55_RS18005	COG5002	protein histidine kinase activity
FORC55_RS18010	COG1879	ABC-type sugar transport system periplasmic component
FORC55_RS18020	COG2827	Endonuclease containing a URI domain
FORC55_RS18025	COG3132	Protein of unknown function, DUF480
FORC55_RS18035	COG2926	Belongs to the UPF0265 family
FORC55_RS18055	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FORC55_RS18065	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
FORC55_RS18070	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
FORC55_RS18075	COG0247	lactate metabolic process
FORC55_RS18080	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FORC55_RS18085	COG3118	belongs to the thioredoxin family
FORC55_RS18110	COG4160	amino acid transport
FORC55_RS18115	COG4215	(ABC) transporter
FORC55_RS18120	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FORC55_RS18125	COG1126	abc transporter atp-binding protein
FORC55_RS18135	COG2425	protein containing a von Willebrand factor type A (vWA) domain
FORC55_RS18145	COG0494	nUDIX hydrolase
FORC55_RS18150	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FORC55_RS18160	COG1309	transcriptional regulator
FORC55_RS18165	COG0513	Belongs to the DEAD box helicase family
FORC55_RS18170	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
FORC55_RS18180	COG0814	amino acid
FORC55_RS18185	COG0840	transmembrane signaling receptor activity
FORC55_RS18190	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FORC55_RS18200	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FORC55_RS18210	COG1984	allophanate hydrolase subunit 2
FORC55_RS18225	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FORC55_RS18230	COG4181	ATPase activity
FORC55_RS18240	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FORC55_RS18245	COG5001	Diguanylate cyclase
FORC55_RS18245	COG1716	ATPase activity
FORC55_RS18260	COG0484	heat shock protein binding
FORC55_RS18275	COG0546	phosphoglycolate phosphatase activity
FORC55_RS18290	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FORC55_RS18300	COG0513	Belongs to the DEAD box helicase family
FORC55_RS18315	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FORC55_RS18325	COG3046	protein related to deoxyribodipyrimidine photolyase
FORC55_RS18330	COG3397	chitin binding
FORC55_RS18345	COG0010	Belongs to the arginase family
FORC55_RS18350	COG1166	arginine decarboxylase activity
FORC55_RS18365	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FORC55_RS18370	COG0459	protein refolding
FORC55_RS18380	COG0527	aspartate kinase activity
FORC55_RS18385	COG0662	Cupin 2, conserved barrel domain protein
FORC55_RS18390	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FORC55_RS18395	COG0456	acetyltransferase
FORC55_RS18400	COG2154	pterin-4-alpha-carbinolamine dehydratase
FORC55_RS18405	COG3186	Phenylalanine-4-hydroxylase
FORC55_RS18430	COG2264	protein methyltransferase activity
FORC55_RS18455	COG1253	flavin adenine dinucleotide binding
FORC55_RS18460	COG1765	OsmC-like protein
FORC55_RS18490	COG0531	amino acid
FORC55_RS18505	COG4989	oxidoreductase activity
FORC55_RS18510	COG0366	Alpha amylase catalytic
FORC55_RS18525	COG2067	long-chain fatty acid transport protein
FORC55_RS18540	COG3227	Zinc metalloprotease (Elastase)
FORC55_RS18550	COG3047	cAMP biosynthetic process
FORC55_RS18560	COG1686	Belongs to the peptidase S11 family
FORC55_RS18565	COG0557	exoribonuclease II activity
FORC55_RS18570	COG1278	Cold shock
FORC55_RS18580	COG2771	luxR family
FORC55_RS18580	COG2200	EAL domain
FORC55_RS18585	COG1063	alcohol dehydrogenase
FORC55_RS18595	COG2873	o-acetylhomoserine
FORC55_RS18605	COG0346	lactoylglutathione lyase activity
FORC55_RS18625	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FORC55_RS18635	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FORC55_RS18640	COG0363	glucosamine-6-phosphate deaminase activity
FORC55_RS18645	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FORC55_RS18670	COG1929	Belongs to the glycerate kinase type-1 family
FORC55_RS18680	COG0748	coenzyme F420 binding
FORC55_RS18685	COG3721	Heme iron utilization protein
FORC55_RS18695	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
FORC55_RS18700	COG0811	peptide transport
FORC55_RS18705	COG0848	biopolymer transport protein
FORC55_RS18710	COG4558	Periplasmic binding protein
FORC55_RS18715	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FORC55_RS18720	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FORC55_RS18755	COG3217	Mosc domain protein beta barrel domain protein
FORC55_RS18755	COG0633	Ferredoxin
FORC55_RS18755	COG3217	Mosc domain protein beta barrel domain protein
FORC55_RS18755	COG0633	Ferredoxin
FORC55_RS18760	COG0418	dihydroorotase activity
FORC55_RS18770	COG3152	Membrane
FORC55_RS18780	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FORC55_RS18785	COG2354	Protein conserved in bacteria
FORC55_RS18790	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
FORC55_RS18795	COG1278	Cold shock
FORC55_RS18815	COG2207	Transcriptional regulator
FORC55_RS18815	COG4753	response regulator
FORC55_RS18830	COG1349	DNA-binding transcription factor activity
FORC55_RS18845	COG3833	ABC-type maltose transport systems, permease component
FORC55_RS18850	COG1175	transmembrane transport
FORC55_RS18860	COG3842	ATPase activity
FORC55_RS18865	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FORC55_RS18880	COG0393	Putative heavy-metal-binding
FORC55_RS18890	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FORC55_RS18895	COG0835	chemotaxis
FORC55_RS18895	COG0784	Response regulator, receiver
FORC55_RS18900	COG1846	Transcriptional regulator
FORC55_RS18905	COG3706	GGDEF domain
FORC55_RS18945	COG0583	DNA-binding transcription factor activity
FORC55_RS18950	COG5001	Diguanylate cyclase
FORC55_RS18960	COG1741	Belongs to the pirin family
FORC55_RS18965	COG3123	guanosine phosphorylase activity
FORC55_RS18980	COG2211	Major facilitator Superfamily
FORC55_RS18995	COG1067	ATP-dependent peptidase activity
FORC55_RS19005	COG4172	Belongs to the ABC transporter superfamily
FORC55_RS19025	COG0583	DNA-binding transcription factor activity
FORC55_RS19030	COG1620	l-lactate permease
FORC55_RS19045	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FORC55_RS19055	COG0840	transmembrane signaling receptor activity
FORC55_RS19065	COG0513	Belongs to the DEAD box helicase family
FORC55_RS19075	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FORC55_RS19090	COG1132	(ABC) transporter
FORC55_RS19100	COG1902	pentaerythritol trinitrate reductase activity
FORC55_RS19110	COG1280	lysine exporter protein (LysE YggA)
FORC55_RS19115	COG2207	Transcriptional regulator
FORC55_RS19135	COG1846	Transcriptional regulator
FORC55_RS19140	COG1764	response to oxidative stress
FORC55_RS19145	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FORC55_RS19150	COG0697	spore germination
FORC55_RS19160	COG0700	Nucleoside recognition
FORC55_RS19165	COG3366	ferrous iron transmembrane transporter activity
FORC55_RS19170	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FORC55_RS19180	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FORC55_RS19185	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
FORC55_RS19190	COG2259	Doxx family
FORC55_RS19215	COG0363	glucosamine-6-phosphate deaminase activity
FORC55_RS19230	COG4580	involved in the transport of maltose and maltodextrins
FORC55_RS19245	COG0840	transmembrane signaling receptor activity
FORC55_RS19255	COG0840	transmembrane signaling receptor activity
FORC55_RS19265	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FORC55_RS19270	COG1126	abc transporter atp-binding protein
FORC55_RS19280	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FORC55_RS19285	COG4597	amino acid ABC transporter
FORC55_RS19290	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FORC55_RS19295	COG2213	PTS system mannitol-specific
FORC55_RS19295	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FORC55_RS19300	COG0246	Mannitol dehydrogenase
FORC55_RS19305	COG3722	fumarate hydratase activity
FORC55_RS19310	COG0673	inositol 2-dehydrogenase activity
FORC55_RS19315	COG3385	transposase activity
FORC55_RS19340	COG0697	spore germination
FORC55_RS19355	COG1335	isochorismatase
FORC55_RS19365	COG2910	NAD(P)H-binding
FORC55_RS19375	COG0840	transmembrane signaling receptor activity
FORC55_RS19380	COG4221	oxidoreductase activity
FORC55_RS19390	COG1901	pseudouridine methyltransferase
FORC55_RS19405	COG0531	amino acid
FORC55_RS19410	COG1982	Orn Lys Arg decarboxylase major
FORC55_RS19445	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FORC55_RS19470	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FORC55_RS19510	COG0745	RESPONSE REGULATOR receiver
FORC55_RS19535	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FORC55_RS19540	COG0840	transmembrane signaling receptor activity
FORC55_RS19545	COG0835	chemotaxis
FORC55_RS19550	COG0835	chemotaxis
FORC55_RS19555	COG2198	Histidine kinase
FORC55_RS19555	COG0643	Histidine kinase
FORC55_RS19575	COG0601	transmembrane transport
FORC55_RS19580	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FORC55_RS19590	COG2194	sulfuric ester hydrolase activity
FORC55_RS19595	COG0642	Histidine kinase
FORC55_RS19630	COG1444	tRNA N-acetyltransferase activity
FORC55_RS19635	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine