VCLMA_RS07565 2313c435dea3649f1d991e491fa9bf38 372 SUPERFAMILY SSF159245 52 372 4.18E-79 T 22-04-2016 VCLMA_RS07565 2313c435dea3649f1d991e491fa9bf38 372 Pfam PF17186 Lipocalin-like domain 251 372 2.2E-25 T 22-04-2016 IPR033451 AttH, lipocalin-like domain VCLMA_RS07565 2313c435dea3649f1d991e491fa9bf38 372 Pfam PF07143 CrtC N-terminal lipocalin domain 76 246 3.9E-39 T 22-04-2016 IPR010791 AttH domain VCLMA_RS07565 2313c435dea3649f1d991e491fa9bf38 372 Gene3D G3DSA:2.40.370.10 253 372 6.2E-22 T 22-04-2016 IPR023374 AttH-like domain VCLMA_RS07565 2313c435dea3649f1d991e491fa9bf38 372 PANTHER PTHR38591 1 372 2.2E-126 T 22-04-2016 VCLMA_RS07565 2313c435dea3649f1d991e491fa9bf38 372 Gene3D G3DSA:2.40.370.10 63 248 1.5E-50 T 22-04-2016 IPR023374 AttH-like domain VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 PANTHER PTHR11544 1 73 2.0E-46 T 22-04-2016 VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.4E-27 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.2E-43 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 PIRSF PIRSF002599 1 73 2.0E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 PANTHER PTHR11544:SF52 1 73 2.0E-46 T 22-04-2016 VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 SUPERFAMILY SSF50249 1 67 3.21E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-14 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 Gene3D G3DSA:2.40.50.140 1 65 1.3E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS05375 9e856c6f65065d419c9b7fcc7d90e065 73 SMART SM00357 3 67 4.2E-26 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VCLMA_RS03235 8c6d9e80390730e7c8f2a1d47e821225 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 2.0E-133 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VCLMA_RS03235 8c6d9e80390730e7c8f2a1d47e821225 437 PANTHER PTHR30588:SF0 2 437 2.6E-211 T 22-04-2016 VCLMA_RS03235 8c6d9e80390730e7c8f2a1d47e821225 437 PANTHER PTHR30588 2 437 2.6E-211 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VCLMA_RS03235 8c6d9e80390730e7c8f2a1d47e821225 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 4.4E-157 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VCLMA_RS09020 44464637f9d17d7620da6d8dd41e5241 196 Pfam PF13305 WHG domain 91 171 5.3E-11 T 22-04-2016 IPR025996 WHG domain VCLMA_RS09020 44464637f9d17d7620da6d8dd41e5241 196 SUPERFAMILY SSF46689 8 78 1.94E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09020 44464637f9d17d7620da6d8dd41e5241 196 SUPERFAMILY SSF48498 84 195 4.6E-18 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VCLMA_RS09020 44464637f9d17d7620da6d8dd41e5241 196 Gene3D G3DSA:1.10.357.10 2 196 5.8E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS09020 44464637f9d17d7620da6d8dd41e5241 196 PANTHER PTHR30055 1 196 1.7E-124 T 22-04-2016 VCLMA_RS09020 44464637f9d17d7620da6d8dd41e5241 196 PANTHER PTHR30055:SF85 1 196 1.7E-124 T 22-04-2016 VCLMA_RS05365 68874e1a065bf2f88a989885304bb167 241 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VCLMA_RS05365 68874e1a065bf2f88a989885304bb167 241 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 240 9.6E-58 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VCLMA_RS05365 68874e1a065bf2f88a989885304bb167 241 PANTHER PTHR21600:SF23 184 240 4.6E-90 T 22-04-2016 VCLMA_RS05365 68874e1a065bf2f88a989885304bb167 241 PANTHER PTHR21600:SF23 56 167 4.6E-90 T 22-04-2016 VCLMA_RS05365 68874e1a065bf2f88a989885304bb167 241 Pfam PF00849 RNA pseudouridylate synthase 66 210 4.8E-14 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS05365 68874e1a065bf2f88a989885304bb167 241 PANTHER PTHR21600 184 240 4.6E-90 T 22-04-2016 VCLMA_RS05365 68874e1a065bf2f88a989885304bb167 241 PANTHER PTHR21600 56 167 4.6E-90 T 22-04-2016 VCLMA_RS05365 68874e1a065bf2f88a989885304bb167 241 SUPERFAMILY SSF55120 64 240 3.2E-44 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 Gene3D G3DSA:3.40.50.10490 294 507 2.2E-150 T 22-04-2016 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 Gene3D G3DSA:3.40.50.10490 9 99 2.2E-150 T 22-04-2016 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 PANTHER PTHR11469:SF11 1 550 0.0 T 22-04-2016 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 Gene3D G3DSA:1.10.1390.10 508 549 1.2E-22 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 PANTHER PTHR11469 1 550 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 8.5E-57 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 8.5E-57 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 8.5E-57 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 8.5E-57 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 8.5E-57 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 8.5E-57 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 Pfam PF00342 Phosphoglucose isomerase 53 542 1.1E-254 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 Gene3D G3DSA:3.40.50.10490 100 291 1.7E-90 T 22-04-2016 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 SUPERFAMILY SSF53697 6 548 4.45E-226 T 22-04-2016 VCLMA_RS01875 df3d2a91622c5d9b29724c61e7f7183a 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.93 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 SUPERFAMILY SSF53955 116 275 8.04E-43 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 PANTHER PTHR21666 57 506 2.2E-250 T 22-04-2016 VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 SUPERFAMILY SSF54106 478 525 1.57E-10 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 PANTHER PTHR21666:SF203 57 506 2.2E-250 T 22-04-2016 VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 Pfam PF01476 LysM domain 481 522 2.6E-11 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 Pfam PF01476 LysM domain 349 391 3.7E-12 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 Pfam PF01476 LysM domain 423 465 2.6E-11 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 SUPERFAMILY SSF54106 347 391 8.89E-11 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 Pfam PF01464 Transglycosylase SLT domain 131 231 2.3E-24 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 138 166 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 Gene3D G3DSA:1.10.530.10 114 276 4.1E-46 T 22-04-2016 VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 SMART SM00257 422 466 9.4E-14 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 SMART SM00257 480 524 1.6E-11 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 SMART SM00257 348 391 1.0E-13 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 SUPERFAMILY SSF54106 421 466 2.75E-11 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 Gene3D G3DSA:3.10.350.10 346 392 3.9E-16 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 Gene3D G3DSA:3.10.350.10 422 467 8.5E-17 T 22-04-2016 IPR018392 LysM domain VCLMA_RS10385 5af7a4c8ff029290027645ff1b808692 532 Gene3D G3DSA:3.10.350.10 478 524 3.3E-17 T 22-04-2016 IPR018392 LysM domain VCLMA_RS07735 35e258f0c5afe3086de9308b6fccab46 147 PANTHER PTHR35535 4 147 1.3E-39 T 22-04-2016 VCLMA_RS07735 35e258f0c5afe3086de9308b6fccab46 147 PANTHER PTHR35535:SF1 4 147 1.3E-39 T 22-04-2016 VCLMA_RS07735 35e258f0c5afe3086de9308b6fccab46 147 Pfam PF03724 META domain 33 139 4.5E-28 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 PANTHER PTHR32071:SF21 1 476 3.6E-291 T 22-04-2016 IPR029995 Transcriptional regulatory protein FlbD GO:0003700|GO:0006355 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 SUPERFAMILY SSF46689 418 468 1.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 SUPERFAMILY SSF46689 342 385 1.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 Gene3D G3DSA:1.10.10.60 424 467 3.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 Gene3D G3DSA:3.40.50.300 129 299 7.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 Pfam PF00072 Response regulator receiver domain 6 115 9.8E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 SMART SM00448 4 115 4.7E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 PANTHER PTHR32071 1 476 3.6E-291 T 22-04-2016 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 Pfam PF00158 Sigma-54 interaction domain 135 295 2.0E-65 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 Gene3D G3DSA:3.40.50.2300 3 120 6.2E-35 T 22-04-2016 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 6.1E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 SMART SM00382 149 293 2.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 SUPERFAMILY SSF52172 3 173 2.13E-39 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 Gene3D G3DSA:1.10.8.60 302 371 6.0E-26 T 22-04-2016 VCLMA_RS09845 2371d7da306dea805ecc846b782849bc 477 SUPERFAMILY SSF52540 139 370 1.08E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05575 1862399a62c9ffef289425d974ab8d79 413 SUPERFAMILY SSF53383 5 409 5.78E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS05575 1862399a62c9ffef289425d974ab8d79 413 PANTHER PTHR11601 1 407 3.1E-159 T 22-04-2016 VCLMA_RS05575 1862399a62c9ffef289425d974ab8d79 413 Gene3D G3DSA:3.40.640.10 36 268 2.7E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS05575 1862399a62c9ffef289425d974ab8d79 413 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 405 3.0E-189 T 22-04-2016 IPR011340 Cysteine desulfurase-related VCLMA_RS05575 1862399a62c9ffef289425d974ab8d79 413 Gene3D G3DSA:3.90.1150.10 269 408 1.0E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS05575 1862399a62c9ffef289425d974ab8d79 413 PANTHER PTHR11601:SF22 1 407 3.1E-159 T 22-04-2016 VCLMA_RS05575 1862399a62c9ffef289425d974ab8d79 413 Pfam PF00266 Aminotransferase class-V 25 401 5.3E-68 T 22-04-2016 IPR000192 Aminotransferase class V domain VCLMA_RS00615 cda5d1ae091c57fc7bbedb713af0ee9b 71 Pfam PF13627 Prokaryotic lipoprotein-attachment site 39 61 4.0E-10 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site VCLMA_RS11695 e8b0125753e7667ffbead92b949d6ed7 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 4.1E-185 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS11695 e8b0125753e7667ffbead92b949d6ed7 419 PANTHER PTHR21090 1 419 8.3E-216 T 22-04-2016 VCLMA_RS11695 e8b0125753e7667ffbead92b949d6ed7 419 Gene3D G3DSA:3.65.10.10 22 219 1.2E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VCLMA_RS11695 e8b0125753e7667ffbead92b949d6ed7 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 5.0E-123 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VCLMA_RS11695 e8b0125753e7667ffbead92b949d6ed7 419 SUPERFAMILY SSF55205 6 418 2.45E-143 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VCLMA_RS11695 e8b0125753e7667ffbead92b949d6ed7 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 46.0 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS11695 e8b0125753e7667ffbead92b949d6ed7 419 Gene3D G3DSA:3.65.10.10 220 416 7.4E-60 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 VCLMA_RS08615 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 Pfam PF03966 Trm112p-like protein 2 41 3.2E-11 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 VCLMA_RS08615 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 SUPERFAMILY SSF158997 1 54 1.83E-20 T 22-04-2016 VCLMA_RS08615 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 Gene3D G3DSA:2.20.25.10 8 57 1.3E-25 T 22-04-2016 VCLMA_RS08615 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.867 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 VCLMA_RS08615 bd200d5bbfcd1b51983ee6c5f5d7efe6 59 PANTHER PTHR33505 1 57 7.3E-26 T 22-04-2016 VCLMA_RS05495 0825df19b3ec590e263bcd9d9359e742 192 Gene3D G3DSA:3.30.60.20 142 189 2.1E-19 T 22-04-2016 VCLMA_RS05495 0825df19b3ec590e263bcd9d9359e742 192 PIRSF PIRSF035805 1 191 9.3E-56 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VCLMA_RS05495 0825df19b3ec590e263bcd9d9359e742 192 Pfam PF00265 Thymidine kinase 2 186 1.5E-58 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VCLMA_RS05495 0825df19b3ec590e263bcd9d9359e742 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.803 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VCLMA_RS05495 0825df19b3ec590e263bcd9d9359e742 192 SUPERFAMILY SSF52540 2 141 1.08E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05495 0825df19b3ec590e263bcd9d9359e742 192 SUPERFAMILY SSF57716 142 189 1.19E-16 T 22-04-2016 VCLMA_RS05495 0825df19b3ec590e263bcd9d9359e742 192 PANTHER PTHR11441 1 190 1.4E-81 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VCLMA_RS05495 0825df19b3ec590e263bcd9d9359e742 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 VCLMA_RS00960 6c80ba560d928323c2a02190efd6dd23 699 SUPERFAMILY SSF56935 37 699 1.08E-127 T 22-04-2016 VCLMA_RS00960 6c80ba560d928323c2a02190efd6dd23 699 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 698 6.0E-106 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 VCLMA_RS00960 6c80ba560d928323c2a02190efd6dd23 699 Pfam PF00593 TonB dependent receptor 468 698 2.1E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VCLMA_RS00960 6c80ba560d928323c2a02190efd6dd23 699 PANTHER PTHR32552:SF17 1 699 1.5E-278 T 22-04-2016 VCLMA_RS00960 6c80ba560d928323c2a02190efd6dd23 699 Gene3D G3DSA:2.170.130.10 36 169 1.7E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VCLMA_RS00960 6c80ba560d928323c2a02190efd6dd23 699 Gene3D G3DSA:2.40.170.20 172 699 1.3E-140 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VCLMA_RS00960 6c80ba560d928323c2a02190efd6dd23 699 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 159 1.2E-17 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VCLMA_RS00960 6c80ba560d928323c2a02190efd6dd23 699 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 51 - T 22-04-2016 IPR010916 TonB box, conserved site VCLMA_RS00960 6c80ba560d928323c2a02190efd6dd23 699 PANTHER PTHR32552 1 699 1.5E-278 T 22-04-2016 VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 2.1E-21 T 22-04-2016 IPR011491 Flagellar hook protein FlgE VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 PANTHER PTHR30435:SF1 312 434 6.4E-89 T 22-04-2016 VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 PANTHER PTHR30435:SF1 1 126 6.4E-89 T 22-04-2016 VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 7.8E-92 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 Pfam PF00460 Flagella basal body rod protein 3 32 1.4E-9 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 PANTHER PTHR30435 312 434 6.4E-89 T 22-04-2016 VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 PANTHER PTHR30435 1 126 6.4E-89 T 22-04-2016 VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 SUPERFAMILY SSF117143 78 395 3.66E-70 T 22-04-2016 VCLMA_RS10195 522ba705b84679b2531868fd59ee0578 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 432 5.5E-15 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCLMA_RS00460 f7365e6496667f587247c30f075313be 333 PANTHER PTHR30600 3 317 2.9E-125 T 22-04-2016 VCLMA_RS00460 f7365e6496667f587247c30f075313be 333 PIRSF PIRSF000294 8 331 1.9E-128 T 22-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VCLMA_RS00460 f7365e6496667f587247c30f075313be 333 SUPERFAMILY SSF46626 20 177 1.14E-47 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00460 f7365e6496667f587247c30f075313be 333 Pfam PF00034 Cytochrome c 198 307 3.4E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00460 f7365e6496667f587247c30f075313be 333 Gene3D G3DSA:1.10.760.10 39 180 4.8E-48 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00460 f7365e6496667f587247c30f075313be 333 Gene3D G3DSA:1.10.760.10 181 321 2.1E-45 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00460 f7365e6496667f587247c30f075313be 333 Pfam PF03150 Di-haem cytochrome c peroxidase 43 189 1.0E-48 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VCLMA_RS00460 f7365e6496667f587247c30f075313be 333 SUPERFAMILY SSF46626 176 326 4.38E-42 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00460 f7365e6496667f587247c30f075313be 333 PANTHER PTHR30600:SF7 3 317 2.9E-125 T 22-04-2016 VCLMA_RS03005 ecc9401f7a4f02d6a3573fb54925950a 341 PANTHER PTHR30465 1 308 3.3E-108 T 22-04-2016 VCLMA_RS03005 ecc9401f7a4f02d6a3573fb54925950a 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 39 6.0E-7 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCLMA_RS03005 ecc9401f7a4f02d6a3573fb54925950a 341 Gene3D G3DSA:1.10.3720.10 93 296 7.1E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03005 ecc9401f7a4f02d6a3573fb54925950a 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 300 2.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03005 ecc9401f7a4f02d6a3573fb54925950a 341 SUPERFAMILY SSF161098 96 279 1.96E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03005 ecc9401f7a4f02d6a3573fb54925950a 341 PANTHER PTHR30465:SF2 1 308 3.3E-108 T 22-04-2016 VCLMA_RS05485 07d828aa69f5a43e853a77b3716dd358 289 Pfam PF01904 Protein of unknown function DUF72 24 263 1.0E-55 T 22-04-2016 IPR002763 Protein of unknown function DUF72 VCLMA_RS05485 07d828aa69f5a43e853a77b3716dd358 289 PANTHER PTHR30348:SF3 7 289 4.2E-91 T 22-04-2016 VCLMA_RS05485 07d828aa69f5a43e853a77b3716dd358 289 Gene3D G3DSA:3.20.20.410 4 274 1.6E-76 T 22-04-2016 IPR002763 Protein of unknown function DUF72 VCLMA_RS05485 07d828aa69f5a43e853a77b3716dd358 289 PANTHER PTHR30348 7 289 4.2E-91 T 22-04-2016 VCLMA_RS05485 07d828aa69f5a43e853a77b3716dd358 289 SUPERFAMILY SSF117396 6 266 4.58E-74 T 22-04-2016 IPR002763 Protein of unknown function DUF72 VCLMA_RS11635 c45bbaa121270665bd9fe5a2cbe9bd92 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 2.5E-31 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VCLMA_RS11635 c45bbaa121270665bd9fe5a2cbe9bd92 149 Gene3D G3DSA:3.40.50.10110 1 146 1.4E-43 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VCLMA_RS11635 c45bbaa121270665bd9fe5a2cbe9bd92 149 SUPERFAMILY SSF102400 1 145 2.88E-42 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VCLMA_RS11635 c45bbaa121270665bd9fe5a2cbe9bd92 149 PANTHER PTHR38767 2 149 5.3E-66 T 22-04-2016 VCLMA_RS04455 a4feea2ba0a489d1ed8c6705454e0cc9 342 Gene3D G3DSA:1.10.8.60 144 221 3.2E-32 T 22-04-2016 VCLMA_RS04455 a4feea2ba0a489d1ed8c6705454e0cc9 342 PANTHER PTHR34388 1 342 3.1E-83 T 22-04-2016 VCLMA_RS04455 a4feea2ba0a489d1ed8c6705454e0cc9 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 1.8E-50 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VCLMA_RS04455 a4feea2ba0a489d1ed8c6705454e0cc9 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 2.1E-107 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VCLMA_RS04455 a4feea2ba0a489d1ed8c6705454e0cc9 342 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 213 333 9.8E-35 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS04455 a4feea2ba0a489d1ed8c6705454e0cc9 342 Gene3D G3DSA:3.40.50.300 1 138 6.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04455 a4feea2ba0a489d1ed8c6705454e0cc9 342 SUPERFAMILY SSF52540 1 208 6.48E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04455 a4feea2ba0a489d1ed8c6705454e0cc9 342 SUPERFAMILY SSF48019 211 333 4.25E-29 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VCLMA_RS04455 a4feea2ba0a489d1ed8c6705454e0cc9 342 Gene3D G3DSA:1.20.272.20 222 336 1.3E-42 T 22-04-2016 VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 SMART SM00344 7 114 4.6E-41 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 Gene3D G3DSA:1.10.10.10 1 58 4.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 Pfam PF01037 Lrp/AsnC ligand binding domain 74 144 1.5E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 PANTHER PTHR30154 1 153 3.7E-65 T 22-04-2016 VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 9.3E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 SUPERFAMILY SSF54909 68 152 1.18E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 PANTHER PTHR30154:SF2 1 153 3.7E-65 T 22-04-2016 VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 SUPERFAMILY SSF46785 6 67 6.39E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.2E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.2E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.2E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS00370 a170109fa12b364988a65509f6cf65ef 153 Gene3D G3DSA:3.30.70.920 70 144 4.4E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.8E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.8E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.8E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 SUPERFAMILY SSF56601 12 282 4.14E-87 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 Gene3D G3DSA:2.60.410.10 282 372 8.9E-32 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 PANTHER PTHR21581:SF4 31 391 9.0E-166 T 22-04-2016 VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 262 5.2E-93 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 SMART SM00936 282 372 2.1E-36 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 Gene3D G3DSA:3.40.710.10 29 281 1.1E-97 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 PANTHER PTHR21581 31 391 9.0E-166 T 22-04-2016 VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 372 8.2E-26 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS04425 72855f9d762ed2c4feffa42fc234fd57 391 SUPERFAMILY SSF69189 282 374 1.88E-26 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.14 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 PANTHER PTHR11405 1 1072 0.0 T 22-04-2016 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF56059 673 932 2.12E-105 T 22-04-2016 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Pfam PF02142 MGS-like domain 956 1041 3.3E-17 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.30.1490.20 141 199 4.7E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF48108 396 554 4.32E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.30.1490.20 686 744 1.7E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.40.50.20 539 662 1.4E-61 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.30.470.20 745 932 4.3E-83 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.30.470.20 200 399 4.8E-74 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.40.50.1380 939 1071 4.7E-39 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF52440 1 127 7.77E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 7.4E-42 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 SMART SM01096 424 547 5.0E-78 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:1.10.1030.10 400 538 3.2E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1050 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF56059 128 401 5.66E-109 T 22-04-2016 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 PANTHER PTHR11405:SF5 1 1072 0.0 T 22-04-2016 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF52440 556 675 1.73E-49 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Gene3D G3DSA:3.40.50.20 3 108 6.6E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 SUPERFAMILY SSF52335 937 1071 3.14E-35 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.402 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 SMART SM00851 955 1041 4.7E-28 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.6E-72 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 875 6.7E-39 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 3.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 3.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11055 ab030f51eaf566a548ced1f2bb1dd566 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.1E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS02180 33c25e1a14daff05a5a4b74ac523a648 468 PANTHER PTHR11785:SF77 1 462 8.3E-228 T 22-04-2016 VCLMA_RS02180 33c25e1a14daff05a5a4b74ac523a648 468 Pfam PF13520 Amino acid permease 5 411 3.0E-66 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VCLMA_RS02180 33c25e1a14daff05a5a4b74ac523a648 468 PIRSF PIRSF006060 1 468 7.1E-47 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VCLMA_RS02180 33c25e1a14daff05a5a4b74ac523a648 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 466 6.4E-160 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 VCLMA_RS02180 33c25e1a14daff05a5a4b74ac523a648 468 PANTHER PTHR11785 1 462 8.3E-228 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 PANTHER PTHR12737:SF13 153 295 5.3E-85 T 22-04-2016 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 Pfam PF02274 Amidinotransferase 23 336 3.4E-68 T 22-04-2016 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 PANTHER PTHR12737 153 295 5.3E-85 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 PANTHER PTHR12737 6 95 5.3E-85 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 Gene3D G3DSA:3.75.10.10 153 336 7.8E-84 T 22-04-2016 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 Gene3D G3DSA:3.75.10.10 5 71 7.8E-84 T 22-04-2016 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 PANTHER PTHR12737:SF13 317 336 5.3E-85 T 22-04-2016 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 PRINTS PR01466 Bacterial arginine deiminase signature 153 171 2.0E-17 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 PRINTS PR01466 Bacterial arginine deiminase signature 6 26 2.0E-17 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 PRINTS PR01466 Bacterial arginine deiminase signature 181 196 2.0E-17 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 PANTHER PTHR12737:SF13 6 95 5.3E-85 T 22-04-2016 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 SUPERFAMILY SSF55909 8 336 6.48E-92 T 22-04-2016 VCLMA_RS15100 b50c930e628442058c9790b091df7be8 336 PANTHER PTHR12737 317 336 5.3E-85 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS09995 0418664a1fe89d90f7d34093a417a049 417 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 319 339 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VCLMA_RS09995 0418664a1fe89d90f7d34093a417a049 417 PANTHER PTHR11119:SF49 1 414 1.5E-175 T 22-04-2016 VCLMA_RS09995 0418664a1fe89d90f7d34093a417a049 417 PANTHER PTHR11119 1 414 1.5E-175 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VCLMA_RS09995 0418664a1fe89d90f7d34093a417a049 417 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 395 4.7E-112 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VCLMA_RS09995 0418664a1fe89d90f7d34093a417a049 417 Pfam PF00860 Permease family 3 371 5.0E-93 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 Pfam PF00072 Response regulator receiver domain 8 116 1.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 SUPERFAMILY SSF52172 3 127 2.28E-35 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 PANTHER PTHR26402 5 232 5.3E-146 T 22-04-2016 VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 Gene3D G3DSA:3.40.50.2300 3 126 2.2E-35 T 22-04-2016 VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 SMART SM00448 5 115 3.3E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 6.6E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 Gene3D G3DSA:1.10.10.10 130 232 1.0E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 PANTHER PTHR26402:SF514 5 232 5.3E-146 T 22-04-2016 VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 SUPERFAMILY SSF46894 131 231 9.92E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS06235 19014e7d3b3604139cc24bd82386bcf7 234 SMART SM00862 153 229 2.8E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 SUPERFAMILY SSF46977 444 581 7.59E-44 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.7E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 SUPERFAMILY SSF51905 3 250 7.47E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 SUPERFAMILY SSF51905 361 420 7.47E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 SUPERFAMILY SSF56425 227 358 2.99E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 Gene3D G3DSA:4.10.80.40 543 577 2.1E-17 T 22-04-2016 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 PANTHER PTHR11632:SF50 1 584 0.0 T 22-04-2016 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.8E-9 T 22-04-2016 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 5.8E-9 T 22-04-2016 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 22-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 Gene3D G3DSA:3.50.50.60 353 417 3.1E-106 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 Gene3D G3DSA:3.50.50.60 5 233 3.1E-106 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 Gene3D G3DSA:1.20.58.100 426 537 1.9E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 PIRSF PIRSF000171 1 573 1.6E-43 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 Pfam PF00890 FAD binding domain 7 397 2.8E-112 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.4E-5 T 22-04-2016 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.4E-5 T 22-04-2016 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 PANTHER PTHR11632 1 584 0.0 T 22-04-2016 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 1.4E-236 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VCLMA_RS12365 8511204cada2eda196c51c2c781e8ea6 602 Gene3D G3DSA:3.90.700.10 234 351 1.2E-34 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VCLMA_RS08870 069ba731bd8a7108c7f201c8dbf9f11d 489 PANTHER PTHR32057 4 489 1.9E-195 T 22-04-2016 VCLMA_RS08870 069ba731bd8a7108c7f201c8dbf9f11d 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 475 44.329 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 VCLMA_RS08870 069ba731bd8a7108c7f201c8dbf9f11d 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 10 458 7.8E-152 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 VCLMA_RS03360 15cc7a7b654c9166c8c640d4d1a325c5 370 PANTHER PTHR30605:SF2 1 370 4.6E-260 T 22-04-2016 VCLMA_RS03360 15cc7a7b654c9166c8c640d4d1a325c5 370 Gene3D G3DSA:3.30.420.40 6 197 1.9E-73 T 22-04-2016 VCLMA_RS03360 15cc7a7b654c9166c8c640d4d1a325c5 370 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 41.757 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VCLMA_RS03360 15cc7a7b654c9166c8c640d4d1a325c5 370 PANTHER PTHR30605 1 370 4.6E-260 T 22-04-2016 VCLMA_RS03360 15cc7a7b654c9166c8c640d4d1a325c5 370 Pfam PF03702 Uncharacterised protein family (UPF0075) 6 368 1.1E-179 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 VCLMA_RS03360 15cc7a7b654c9166c8c640d4d1a325c5 370 SUPERFAMILY SSF53067 6 40 1.21E-25 T 22-04-2016 VCLMA_RS03360 15cc7a7b654c9166c8c640d4d1a325c5 370 SUPERFAMILY SSF53067 67 112 1.21E-25 T 22-04-2016 VCLMA_RS03360 15cc7a7b654c9166c8c640d4d1a325c5 370 SUPERFAMILY SSF53067 144 343 1.21E-25 T 22-04-2016 VCLMA_RS03495 d8e0c43f9765d133ed400130dfd381cf 466 PANTHER PTHR30217:SF6 2 211 1.9E-241 T 22-04-2016 VCLMA_RS03495 d8e0c43f9765d133ed400130dfd381cf 466 PANTHER PTHR30217:SF6 258 466 1.9E-241 T 22-04-2016 VCLMA_RS03495 d8e0c43f9765d133ed400130dfd381cf 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS03495 d8e0c43f9765d133ed400130dfd381cf 466 Pfam PF01136 Peptidase family U32 80 355 1.4E-96 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS03495 d8e0c43f9765d133ed400130dfd381cf 466 Pfam PF16325 Peptidase family U32 C-terminal domain 371 452 1.0E-20 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS03495 d8e0c43f9765d133ed400130dfd381cf 466 PANTHER PTHR30217 2 211 1.9E-241 T 22-04-2016 VCLMA_RS03495 d8e0c43f9765d133ed400130dfd381cf 466 PANTHER PTHR30217 258 466 1.9E-241 T 22-04-2016 VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 PANTHER PTHR10160 1 371 4.4E-218 T 22-04-2016 VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 SMART SM01002 149 297 1.2E-87 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 Gene3D G3DSA:3.50.50.60 179 202 1.0E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 SUPERFAMILY SSF52283 305 360 2.21E-67 T 22-04-2016 VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 SUPERFAMILY SSF52283 1 137 2.21E-67 T 22-04-2016 VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 2.0E-156 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.4E-46 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 Gene3D G3DSA:3.40.50.1770 203 358 8.2E-30 T 22-04-2016 VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 PIRSF PIRSF000183 1 371 1.2E-156 T 22-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 SUPERFAMILY SSF51735 137 303 1.37E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 Gene3D G3DSA:3.40.50.1770 3 178 1.2E-61 T 22-04-2016 VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 9.6E-84 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VCLMA_RS08750 b9d0c34fa3a52ad1efd7eb7328d77944 374 SMART SM01003 4 137 8.9E-79 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VCLMA_RS07260 39d533dd33e11f2bb04a80d0c097e11e 404 Pfam PF02687 FtsX-like permease family 282 396 1.9E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VCLMA_RS07260 39d533dd33e11f2bb04a80d0c097e11e 404 Pfam PF12704 MacB-like periplasmic core domain 19 237 1.8E-23 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VCLMA_RS07260 39d533dd33e11f2bb04a80d0c097e11e 404 PANTHER PTHR30572 1 403 3.4E-63 T 22-04-2016 VCLMA_RS11725 d52074be75fa53acd7c1af09a8f79bbd 267 PANTHER PTHR24220:SF368 8 263 1.9E-192 T 22-04-2016 VCLMA_RS11725 d52074be75fa53acd7c1af09a8f79bbd 267 PANTHER PTHR24220 8 263 1.9E-192 T 22-04-2016 VCLMA_RS11725 d52074be75fa53acd7c1af09a8f79bbd 267 Pfam PF00005 ABC transporter 23 170 2.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS11725 d52074be75fa53acd7c1af09a8f79bbd 267 Gene3D G3DSA:3.40.50.300 3 236 2.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11725 d52074be75fa53acd7c1af09a8f79bbd 267 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS11725 d52074be75fa53acd7c1af09a8f79bbd 267 SUPERFAMILY SSF52540 6 240 3.51E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11725 d52074be75fa53acd7c1af09a8f79bbd 267 SMART SM00382 31 227 8.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 Gene3D G3DSA:3.20.20.80 521 833 9.7E-59 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 Pfam PF00704 Glycosyl hydrolases family 18 523 824 2.8E-25 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 SUPERFAMILY SSF51445 520 832 2.34E-48 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 SUPERFAMILY SSF51055 19 78 5.3E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 SMART SM00495 28 74 3.2E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 SMART SM00495 276 325 8.1E-9 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 Gene3D G3DSA:2.10.10.20 25 77 3.3E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 SMART SM00636 522 824 1.3E-4 T 22-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 ProSitePatterns PS01095 Chitinases family 18 active site. 636 644 - T 22-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 PANTHER PTHR11177 493 833 1.6E-61 T 22-04-2016 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 PANTHER PTHR11177:SF195 493 833 1.6E-61 T 22-04-2016 VCLMA_RS08965 95e6874d9649de953077b2821c735afa 846 Pfam PF02839 Carbohydrate binding domain 29 71 6.9E-8 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS10000 5f45d1ae03ac422ca041ae8487c51bfa 160 PANTHER PTHR30411 1 160 1.9E-74 T 22-04-2016 VCLMA_RS10000 5f45d1ae03ac422ca041ae8487c51bfa 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 3.8E-60 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VCLMA_RS10000 5f45d1ae03ac422ca041ae8487c51bfa 160 PIRSF PIRSF006181 1 159 4.1E-55 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VCLMA_RS10000 5f45d1ae03ac422ca041ae8487c51bfa 160 PANTHER PTHR30411:SF0 1 160 1.9E-74 T 22-04-2016 VCLMA_RS10000 5f45d1ae03ac422ca041ae8487c51bfa 160 SUPERFAMILY SSF55826 2 157 6.54E-46 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VCLMA_RS10000 5f45d1ae03ac422ca041ae8487c51bfa 160 Pfam PF04073 Aminoacyl-tRNA editing domain 32 147 2.1E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VCLMA_RS10000 5f45d1ae03ac422ca041ae8487c51bfa 160 Gene3D G3DSA:3.90.960.10 1 158 4.7E-61 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 503 2.7E-10 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 Pfam PF13654 AAA domain 79 287 2.8E-19 T 22-04-2016 VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 PANTHER PTHR10046:SF49 215 511 9.7E-160 T 22-04-2016 VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 2.0E-11 T 22-04-2016 VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 2.0E-11 T 22-04-2016 VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 2.0E-11 T 22-04-2016 VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 2.0E-11 T 22-04-2016 VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 PANTHER PTHR10046 215 511 9.7E-160 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 Gene3D G3DSA:3.30.230.10 306 506 2.1E-33 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS06870 904f4559d0455ef37fffec19f300d3f0 549 SUPERFAMILY SSF54211 314 506 1.25E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS07115 484040a95b8163b7b0452464650f978d 673 PANTHER PTHR32089 288 673 6.6E-183 T 22-04-2016 VCLMA_RS07115 484040a95b8163b7b0452464650f978d 673 PANTHER PTHR32089:SF44 288 673 6.6E-183 T 22-04-2016 VCLMA_RS07115 484040a95b8163b7b0452464650f978d 673 SUPERFAMILY SSF58104 364 671 1.44E-57 T 22-04-2016 VCLMA_RS07115 484040a95b8163b7b0452464650f978d 673 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 456 668 6.4E-39 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS07115 484040a95b8163b7b0452464650f978d 673 SMART SM00283 402 671 5.5E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS07115 484040a95b8163b7b0452464650f978d 673 Gene3D G3DSA:1.10.287.950 425 642 7.1E-48 T 22-04-2016 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Gene3D G3DSA:3.10.150.10 249 366 8.8E-39 T 22-04-2016 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 SMART SM00480 17 362 8.0E-140 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 SUPERFAMILY SSF55979 245 366 1.09E-36 T 22-04-2016 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 SUPERFAMILY SSF55979 126 244 1.51E-27 T 22-04-2016 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 PIRSF PIRSF000804 1 366 1.0E-117 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Gene3D G3DSA:3.10.150.10 122 248 3.6E-36 T 22-04-2016 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 3.8E-37 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 PANTHER PTHR30478 2 366 1.1E-144 T 22-04-2016 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 SUPERFAMILY SSF55979 1 118 1.41E-28 T 22-04-2016 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 1.4E-38 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Gene3D G3DSA:3.10.150.10 1 121 7.0E-32 T 22-04-2016 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 6.4E-34 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00060 aca5ffa031c1eb69f0d9f4f2cff4a220 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 3.4E-107 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS02470 d3490653ffed02e293ef248d9de8a536 359 PANTHER PTHR33376 1 345 2.0E-168 T 22-04-2016 VCLMA_RS02470 d3490653ffed02e293ef248d9de8a536 359 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 324 5.5E-74 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VCLMA_RS02470 d3490653ffed02e293ef248d9de8a536 359 PIRSF PIRSF039026 1 358 1.2E-131 T 22-04-2016 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VCLMA_RS02470 d3490653ffed02e293ef248d9de8a536 359 PANTHER PTHR33376:SF5 1 345 2.0E-168 T 22-04-2016 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 SUPERFAMILY SSF88659 92 162 5.23E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 Gene3D G3DSA:1.10.10.10 91 138 4.7E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 Pfam PF04539 Sigma-70 region 3 100 172 3.8E-14 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 Gene3D G3DSA:1.10.10.10 176 238 2.2E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 237 1.5E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 SUPERFAMILY SSF88946 6 91 1.83E-22 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 2.9E-82 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 PANTHER PTHR30385:SF7 5 244 2.6E-77 T 22-04-2016 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 7.3E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 7.3E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 7.3E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 7.3E-12 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 Gene3D G3DSA:1.10.601.10 19 86 3.2E-14 T 22-04-2016 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 PANTHER PTHR30385 5 244 2.6E-77 T 22-04-2016 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 SUPERFAMILY SSF88659 163 240 5.61E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 61.592 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 Pfam PF04545 Sigma-70, region 4 187 234 4.0E-18 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 PIRSF PIRSF000770 3 242 4.1E-36 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 VCLMA_RS09525 ce5b58d7411a235444352fc73a2c613d 244 Pfam PF04542 Sigma-70 region 2 20 91 4.0E-15 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02360 478b09f4d463d8560d65523662fda6ff 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.264 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 VCLMA_RS02360 478b09f4d463d8560d65523662fda6ff 187 PANTHER PTHR30327 1 187 2.2E-70 T 22-04-2016 VCLMA_RS02360 478b09f4d463d8560d65523662fda6ff 187 SUPERFAMILY SSF143456 1 187 1.57E-67 T 22-04-2016 VCLMA_RS02360 478b09f4d463d8560d65523662fda6ff 187 PANTHER PTHR30327:SF1 1 187 2.2E-70 T 22-04-2016 VCLMA_RS02360 478b09f4d463d8560d65523662fda6ff 187 Gene3D G3DSA:3.30.70.1300 42 130 2.3E-30 T 22-04-2016 VCLMA_RS02360 478b09f4d463d8560d65523662fda6ff 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 8.9E-52 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 VCLMA_RS02360 478b09f4d463d8560d65523662fda6ff 187 Gene3D G3DSA:3.40.1740.10 131 178 7.9E-38 T 22-04-2016 VCLMA_RS02360 478b09f4d463d8560d65523662fda6ff 187 Gene3D G3DSA:3.40.1740.10 2 40 7.9E-38 T 22-04-2016 VCLMA_RS02790 0e35b50f6fd164376810411c48719004 142 Gene3D G3DSA:3.90.1180.10 3 141 9.3E-66 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02790 0e35b50f6fd164376810411c48719004 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02790 0e35b50f6fd164376810411c48719004 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 2.6E-65 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02790 0e35b50f6fd164376810411c48719004 142 PIRSF PIRSF002181 1 142 1.6E-52 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02790 0e35b50f6fd164376810411c48719004 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.831 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02790 0e35b50f6fd164376810411c48719004 142 SUPERFAMILY SSF52161 1 140 7.85E-61 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02790 0e35b50f6fd164376810411c48719004 142 Pfam PF00572 Ribosomal protein L13 15 138 2.5E-57 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02790 0e35b50f6fd164376810411c48719004 142 PANTHER PTHR11545 1 142 3.1E-79 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS06075 fdc90c82661ed7680c3e21493db34ab8 721 PANTHER PTHR10587:SF63 40 306 4.4E-145 T 22-04-2016 VCLMA_RS06075 fdc90c82661ed7680c3e21493db34ab8 721 PANTHER PTHR10587:SF63 355 633 4.4E-145 T 22-04-2016 VCLMA_RS06075 fdc90c82661ed7680c3e21493db34ab8 721 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 1 635 45.114 T 22-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 VCLMA_RS06075 fdc90c82661ed7680c3e21493db34ab8 721 Pfam PF13632 Glycosyl transferase family group 2 231 420 5.7E-13 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VCLMA_RS06075 fdc90c82661ed7680c3e21493db34ab8 721 SUPERFAMILY SSF53448 132 420 3.94E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS06075 fdc90c82661ed7680c3e21493db34ab8 721 PANTHER PTHR10587 40 306 4.4E-145 T 22-04-2016 VCLMA_RS06075 fdc90c82661ed7680c3e21493db34ab8 721 PANTHER PTHR10587 355 633 4.4E-145 T 22-04-2016 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 SMART SM00490 265 344 6.0E-12 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 SUPERFAMILY SSF57829 425 465 2.01E-6 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 Gene3D G3DSA:3.40.50.300 236 364 2.4E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 8.7E-23 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 Pfam PF00271 Helicase conserved C-terminal domain 239 342 3.5E-14 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 SUPERFAMILY SSF52540 236 362 1.01E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 SUPERFAMILY SSF52540 49 188 1.01E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 SMART SM00487 1 178 2.6E-13 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 Gene3D G3DSA:3.40.50.300 2 154 4.4E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 PANTHER PTHR24031 232 366 1.8E-161 T 22-04-2016 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 PANTHER PTHR24031 1 162 1.8E-161 T 22-04-2016 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 PANTHER PTHR24031 443 573 1.8E-161 T 22-04-2016 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 PANTHER PTHR24031 186 196 1.8E-161 T 22-04-2016 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 PANTHER PTHR24031:SF319 232 366 1.8E-161 T 22-04-2016 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 PANTHER PTHR24031:SF319 1 162 1.8E-161 T 22-04-2016 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 PANTHER PTHR24031:SF319 443 573 1.8E-161 T 22-04-2016 VCLMA_RS07605 5720d45e5fc764c662cdf42164dbf581 594 PANTHER PTHR24031:SF319 186 196 1.8E-161 T 22-04-2016 VCLMA_RS11340 603c56279a08d2e59657c6c87439b907 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 6.1E-63 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VCLMA_RS11340 603c56279a08d2e59657c6c87439b907 545 PANTHER PTHR11550 1 536 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VCLMA_RS11340 603c56279a08d2e59657c6c87439b907 545 SUPERFAMILY SSF52317 289 539 5.47E-88 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS11340 603c56279a08d2e59657c6c87439b907 545 SUPERFAMILY SSF52540 3 269 1.68E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11340 603c56279a08d2e59657c6c87439b907 545 Gene3D G3DSA:3.40.50.880 288 538 1.3E-98 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS11340 603c56279a08d2e59657c6c87439b907 545 Gene3D G3DSA:3.40.50.300 1 280 5.2E-133 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11340 603c56279a08d2e59657c6c87439b907 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.212 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VCLMA_RS11340 603c56279a08d2e59657c6c87439b907 545 Pfam PF06418 CTP synthase N-terminus 5 265 8.6E-125 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VCLMA_RS11340 603c56279a08d2e59657c6c87439b907 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 5.3E-260 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 SUPERFAMILY SSF52402 174 372 1.19E-42 T 22-04-2016 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 SUPERFAMILY SSF143437 1 173 3.14E-45 T 22-04-2016 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 483 219.368 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.8E-72 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 PANTHER PTHR14911:SF15 3 418 1.5E-265 T 22-04-2016 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 Pfam PF02926 THUMP domain 52 157 1.6E-21 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 SMART SM00981 75 165 3.2E-20 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 Gene3D G3DSA:3.40.250.10 399 481 7.2E-12 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 Gene3D G3DSA:3.40.50.620 173 333 1.1E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 375 3.3E-109 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 483 8.3E-40 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 PANTHER PTHR14911 3 418 1.5E-265 T 22-04-2016 VCLMA_RS04185 bff1f2a7476ff36fdf8ba282775d2f6a 483 SUPERFAMILY SSF52821 399 482 4.25E-13 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS09600 4ae6e1b3f31fc74835d612dec2e9353a 260 PANTHER PTHR30477 6 258 3.1E-82 T 22-04-2016 VCLMA_RS09600 4ae6e1b3f31fc74835d612dec2e9353a 260 PANTHER PTHR30477:SF0 6 258 3.1E-82 T 22-04-2016 VCLMA_RS09600 4ae6e1b3f31fc74835d612dec2e9353a 260 SUPERFAMILY SSF81345 2 257 1.44E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS09600 4ae6e1b3f31fc74835d612dec2e9353a 260 Pfam PF00950 ABC 3 transport family 2 255 5.2E-73 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 VCLMA_RS09600 4ae6e1b3f31fc74835d612dec2e9353a 260 Gene3D G3DSA:1.10.3470.10 52 246 1.9E-6 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.0E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 SUPERFAMILY SSF52172 1 133 4.13E-37 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 SUPERFAMILY SSF46894 119 217 5.67E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 PANTHER PTHR26402:SF316 1 219 5.6E-100 T 22-04-2016 VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 Gene3D G3DSA:3.40.50.2300 1 120 1.5E-34 T 22-04-2016 VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 SMART SM00862 145 216 3.0E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 Pfam PF00072 Response regulator receiver domain 3 113 8.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 SMART SM00448 1 112 1.6E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 PANTHER PTHR26402 1 219 5.6E-100 T 22-04-2016 VCLMA_RS07615 dbb9a0cf3f1cd1000f0e67fe77404b30 219 Gene3D G3DSA:1.10.10.10 122 218 4.3E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 SUPERFAMILY SSF63411 468 691 7.83E-60 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 PANTHER PTHR11851:SF131 376 916 0.0 T 22-04-2016 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 PANTHER PTHR11851:SF131 1 359 0.0 T 22-04-2016 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 Gene3D G3DSA:3.30.830.10 470 704 4.7E-70 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 Gene3D G3DSA:3.30.830.10 239 469 2.9E-76 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 SUPERFAMILY SSF63411 234 457 8.33E-76 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 SUPERFAMILY SSF63411 4 226 1.04E-60 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 Pfam PF16187 Middle or third domain of peptidase_M16 365 642 1.4E-84 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 Pfam PF00675 Insulinase (Peptidase family M16) 22 158 1.3E-36 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 SUPERFAMILY SSF63411 701 912 8.03E-45 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 PANTHER PTHR11851 376 916 0.0 T 22-04-2016 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 PANTHER PTHR11851 1 359 0.0 T 22-04-2016 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 Gene3D G3DSA:3.30.830.10 705 920 1.8E-48 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 Pfam PF05193 Peptidase M16 inactive domain 182 357 6.6E-26 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 Pfam PF05193 Peptidase M16 inactive domain 646 822 1.5E-11 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VCLMA_RS09550 d4c1e37a9249ce58e542a82bd957fe7e 923 Gene3D G3DSA:3.30.830.10 4 232 1.1E-72 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 Gene3D G3DSA:3.50.50.60 237 398 1.5E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 PANTHER PTHR11938 23 468 1.9E-302 T 22-04-2016 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 2.4E-36 T 22-04-2016 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 2.4E-36 T 22-04-2016 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 2.4E-36 T 22-04-2016 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 2.4E-36 T 22-04-2016 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 2.4E-36 T 22-04-2016 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 Gene3D G3DSA:3.40.50.720 150 236 2.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 Gene3D G3DSA:3.40.50.720 399 468 2.3E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 SUPERFAMILY SSF51971 145 399 2.41E-69 T 22-04-2016 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 470 1.2E-251 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 Gene3D G3DSA:1.10.1060.10 5 149 3.7E-47 T 22-04-2016 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 PANTHER PTHR11938:SF93 23 468 1.9E-302 T 22-04-2016 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 SUPERFAMILY SSF46548 6 157 8.89E-42 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 457 2.0E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11010 4b98e56ffbdcfca3a06fe618858cc381 470 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 1.3E-38 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VCLMA_RS03375 6d5aec03100f169d010190dc340d23d1 559 PANTHER PTHR34220:SF3 1 554 2.9E-291 T 22-04-2016 VCLMA_RS03375 6d5aec03100f169d010190dc340d23d1 559 Pfam PF06580 Histidine kinase 366 445 3.3E-27 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VCLMA_RS03375 6d5aec03100f169d010190dc340d23d1 559 Pfam PF13492 GAF domain 242 351 3.8E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 VCLMA_RS03375 6d5aec03100f169d010190dc340d23d1 559 SUPERFAMILY SSF55781 227 351 3.64E-8 T 22-04-2016 IPR029016 GAF domain-like VCLMA_RS03375 6d5aec03100f169d010190dc340d23d1 559 SUPERFAMILY SSF55874 421 554 2.66E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03375 6d5aec03100f169d010190dc340d23d1 559 Pfam PF07694 5TMR of 5TMR-LYT 25 193 2.7E-58 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VCLMA_RS03375 6d5aec03100f169d010190dc340d23d1 559 Gene3D G3DSA:3.30.565.10 415 555 2.6E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03375 6d5aec03100f169d010190dc340d23d1 559 PANTHER PTHR34220 1 554 2.9E-291 T 22-04-2016 VCLMA_RS03375 6d5aec03100f169d010190dc340d23d1 559 Gene3D G3DSA:3.30.450.40 290 358 9.7E-5 T 22-04-2016 IPR029016 GAF domain-like VCLMA_RS02050 1164adae4f4d2894af0a4e5a54b47324 407 Pfam PF00482 Type II secretion system (T2SS), protein F 72 195 1.2E-29 T 22-04-2016 IPR018076 Type II secretion system F domain VCLMA_RS02050 1164adae4f4d2894af0a4e5a54b47324 407 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 8.9E-26 T 22-04-2016 IPR018076 Type II secretion system F domain VCLMA_RS02050 1164adae4f4d2894af0a4e5a54b47324 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VCLMA_RS02050 1164adae4f4d2894af0a4e5a54b47324 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 68 80 1.0E-8 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS02050 1164adae4f4d2894af0a4e5a54b47324 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 1.0E-8 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS02050 1164adae4f4d2894af0a4e5a54b47324 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 1.0E-8 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS02050 1164adae4f4d2894af0a4e5a54b47324 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 1.0E-8 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS02050 1164adae4f4d2894af0a4e5a54b47324 407 PANTHER PTHR30012 2 406 0.0 T 22-04-2016 VCLMA_RS02050 1164adae4f4d2894af0a4e5a54b47324 407 PANTHER PTHR30012:SF4 2 406 0.0 T 22-04-2016 VCLMA_RS09345 e9d8999025676f8d15c941c179f9be8a 519 Pfam PF01740 STAS domain 416 509 8.3E-6 T 22-04-2016 IPR002645 STAS domain VCLMA_RS09345 e9d8999025676f8d15c941c179f9be8a 519 PANTHER PTHR11814 12 503 2.7E-184 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 VCLMA_RS09345 e9d8999025676f8d15c941c179f9be8a 519 Pfam PF00916 Sulfate permease family 13 374 5.3E-57 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VCLMA_RS09345 e9d8999025676f8d15c941c179f9be8a 519 PANTHER PTHR11814:SF71 12 503 2.7E-184 T 22-04-2016 VCLMA_RS09345 e9d8999025676f8d15c941c179f9be8a 519 SUPERFAMILY SSF52091 416 497 1.37E-10 T 22-04-2016 IPR002645 STAS domain VCLMA_RS09345 e9d8999025676f8d15c941c179f9be8a 519 Gene3D G3DSA:3.30.750.24 414 504 2.7E-8 T 22-04-2016 IPR002645 STAS domain VCLMA_RS00115 6709560365a13f3b8b0a56dbb382c1d4 82 PANTHER PTHR33279:SF5 1 78 1.8E-51 T 22-04-2016 VCLMA_RS00115 6709560365a13f3b8b0a56dbb382c1d4 82 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 27.25 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 VCLMA_RS00115 6709560365a13f3b8b0a56dbb382c1d4 82 SUPERFAMILY SSF64307 8 78 1.96E-22 T 22-04-2016 IPR001455 TusA-like domain VCLMA_RS00115 6709560365a13f3b8b0a56dbb382c1d4 82 Pfam PF01206 Sulfurtransferase TusA 10 78 9.2E-21 T 22-04-2016 IPR001455 TusA-like domain VCLMA_RS00115 6709560365a13f3b8b0a56dbb382c1d4 82 Gene3D G3DSA:3.30.110.40 8 78 7.1E-26 T 22-04-2016 IPR001455 TusA-like domain VCLMA_RS00115 6709560365a13f3b8b0a56dbb382c1d4 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain VCLMA_RS00115 6709560365a13f3b8b0a56dbb382c1d4 82 PANTHER PTHR33279 1 78 1.8E-51 T 22-04-2016 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 Gene3D G3DSA:3.30.420.40 5 129 7.9E-43 T 22-04-2016 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 SUPERFAMILY SSF109604 309 495 9.1E-41 T 22-04-2016 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 Gene3D G3DSA:3.30.420.150 131 304 3.9E-50 T 22-04-2016 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 SUPERFAMILY SSF53067 135 304 3.7E-42 T 22-04-2016 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 PANTHER PTHR30005 1 492 0.0 T 22-04-2016 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 PANTHER PTHR30005:SF2 1 492 0.0 T 22-04-2016 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 PIRSF PIRSF001267 1 497 3.4E-179 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 SUPERFAMILY SSF53067 9 129 3.56E-36 T 22-04-2016 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 Pfam PF02541 Ppx/GppA phosphatase family 23 303 2.6E-88 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VCLMA_RS01455 ff642af7a93548695de0d59952947fac 497 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 495 58.273 T 22-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VCLMA_RS09545 da38d070c8e89fe72cfbc7503e11189e 155 Gene3D G3DSA:3.40.50.1240 1 151 5.5E-38 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VCLMA_RS09545 da38d070c8e89fe72cfbc7503e11189e 155 PANTHER PTHR23029 1 80 2.5E-12 T 22-04-2016 VCLMA_RS09545 da38d070c8e89fe72cfbc7503e11189e 155 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 155 3.4E-37 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VCLMA_RS09545 da38d070c8e89fe72cfbc7503e11189e 155 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 79 2.7E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VCLMA_RS09545 da38d070c8e89fe72cfbc7503e11189e 155 SMART SM00855 2 117 3.9E-7 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VCLMA_RS09545 da38d070c8e89fe72cfbc7503e11189e 155 SUPERFAMILY SSF53254 1 142 9.85E-22 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VCLMA_RS04765 17da202ff9891eb10b5620fc9aac2d63 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.338 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VCLMA_RS04765 17da202ff9891eb10b5620fc9aac2d63 193 PANTHER PTHR30335 2 193 1.7E-134 T 22-04-2016 VCLMA_RS04765 17da202ff9891eb10b5620fc9aac2d63 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 1.4E-61 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VCLMA_RS04765 17da202ff9891eb10b5620fc9aac2d63 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.1E-90 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 VCLMA_RS04765 17da202ff9891eb10b5620fc9aac2d63 193 PIRSF PIRSF006102 1 193 1.8E-64 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VCLMA_RS04765 17da202ff9891eb10b5620fc9aac2d63 193 PANTHER PTHR30335:SF0 2 193 1.7E-134 T 22-04-2016 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 SUPERFAMILY SSF52540 303 553 1.25E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 PANTHER PTHR24220:SF336 329 440 2.8E-213 T 22-04-2016 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 PANTHER PTHR24220:SF336 5 293 2.8E-213 T 22-04-2016 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 562 0.0013 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 8.8E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 Gene3D G3DSA:3.40.50.300 2 255 1.3E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 Gene3D G3DSA:3.40.50.300 301 555 1.2E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 SMART SM00382 338 534 8.3E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 SMART SM00382 32 231 4.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 PANTHER PTHR24220 329 440 2.8E-213 T 22-04-2016 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 PANTHER PTHR24220 5 293 2.8E-213 T 22-04-2016 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 Pfam PF00005 ABC transporter 24 181 3.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 Pfam PF00005 ABC transporter 330 483 1.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS00875 c65272633b797c997c31de0afda1e626 571 SUPERFAMILY SSF52540 3 253 4.11E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04325 6c7091ed4c608dd0dffd636756848d4a 340 SUPERFAMILY SSF48239 28 329 4.55E-21 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid VCLMA_RS04325 6c7091ed4c608dd0dffd636756848d4a 340 Gene3D G3DSA:1.50.10.20 48 283 1.7E-9 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 Pfam PF04055 Radical SAM superfamily 19 116 1.1E-7 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 PIRSF PIRSF000370 1 216 4.0E-67 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 Pfam PF13394 4Fe-4S single cluster domain 17 129 1.9E-12 T 22-04-2016 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 Gene3D G3DSA:3.20.20.70 22 115 1.2E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 2 216 5.3E-113 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 PANTHER PTHR11228:SF6 1 49 2.2E-52 T 22-04-2016 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 PANTHER PTHR11228:SF6 65 215 2.2E-52 T 22-04-2016 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 PANTHER PTHR11228 1 49 2.2E-52 T 22-04-2016 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 PANTHER PTHR11228 65 215 2.2E-52 T 22-04-2016 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 SUPERFAMILY SSF102114 19 114 1.31E-6 T 22-04-2016 VCLMA_RS06445 6119400bfde5e204d9301e11da0ff9cb 216 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 1 216 33.452 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 VCLMA_RS07160 f53d16b9add9ec119dc9f2123ac00397 206 SUPERFAMILY SSF74653 118 196 1.44E-24 T 22-04-2016 VCLMA_RS07160 f53d16b9add9ec119dc9f2123ac00397 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 205 4.4E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 VCLMA_RS07160 f53d16b9add9ec119dc9f2123ac00397 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 2.7E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VCLMA_RS07160 f53d16b9add9ec119dc9f2123ac00397 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 2.7E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VCLMA_RS07160 f53d16b9add9ec119dc9f2123ac00397 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 2.7E-12 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VCLMA_RS07160 f53d16b9add9ec119dc9f2123ac00397 206 Gene3D G3DSA:3.30.1150.10 115 205 1.8E-9 T 22-04-2016 VCLMA_RS07160 f53d16b9add9ec119dc9f2123ac00397 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 2.3E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 VCLMA_RS07160 f53d16b9add9ec119dc9f2123ac00397 206 PANTHER PTHR33446 55 205 3.4E-36 T 22-04-2016 VCLMA_RS07160 f53d16b9add9ec119dc9f2123ac00397 206 PANTHER PTHR33446:SF1 55 205 3.4E-36 T 22-04-2016 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:3.40.50.300 445 666 6.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:3.40.50.300 171 352 2.9E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 SUPERFAMILY SSF52540 171 424 4.96E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 SUPERFAMILY SSF81923 1 142 3.66E-59 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 4.8E-25 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 PANTHER PTHR11638:SF111 155 755 0.0 T 22-04-2016 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 PANTHER PTHR11638:SF111 1 139 0.0 T 22-04-2016 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:1.10.8.60 355 439 8.7E-31 T 22-04-2016 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 SMART SM01086 656 745 1.2E-37 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 PANTHER PTHR11638 155 755 0.0 T 22-04-2016 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 PANTHER PTHR11638 1 139 0.0 T 22-04-2016 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 5.0E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:1.10.1780.10 1 142 4.7E-44 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 4.6E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 4.6E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 4.6E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 4.6E-36 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 Gene3D G3DSA:1.10.8.60 667 748 1.9E-30 T 22-04-2016 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 SMART SM00382 209 354 3.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 SMART SM00382 490 657 7.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 649 3.8E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 SUPERFAMILY SSF52540 440 744 1.89E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05385 861c467684d4ee71e9e73f357a9d3f38 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 1.3E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 VCLMA_RS03270 839bbb0acd2877483bb12482588afa05 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.33 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH VCLMA_RS03270 839bbb0acd2877483bb12482588afa05 172 SUPERFAMILY SSF55811 6 152 1.11E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS03270 839bbb0acd2877483bb12482588afa05 172 Pfam PF00293 NUDIX domain 7 145 1.4E-26 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VCLMA_RS03270 839bbb0acd2877483bb12482588afa05 172 Gene3D G3DSA:3.90.79.10 5 151 7.4E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS03270 839bbb0acd2877483bb12482588afa05 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VCLMA_RS03270 839bbb0acd2877483bb12482588afa05 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 8.8E-8 T 22-04-2016 IPR020476 NUDIX hydrolase VCLMA_RS03270 839bbb0acd2877483bb12482588afa05 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 8.8E-8 T 22-04-2016 IPR020476 NUDIX hydrolase VCLMA_RS03270 839bbb0acd2877483bb12482588afa05 172 PANTHER PTHR23114 1 158 7.0E-64 T 22-04-2016 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 Gene3D G3DSA:3.30.870.10 500 684 2.4E-70 T 22-04-2016 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 4.2E-145 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 32.469 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 2.5E-266 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 Gene3D G3DSA:3.30.870.10 315 499 4.8E-72 T 22-04-2016 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 Gene3D G3DSA:3.30.1840.10 107 300 5.8E-54 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 PIRSF PIRSF015589 1 696 1.4E-254 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 PANTHER PTHR30218:SF0 1 701 0.0 T 22-04-2016 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 PANTHER PTHR30218 1 701 0.0 T 22-04-2016 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 7.2E-31 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 SUPERFAMILY SSF140356 4 104 3.01E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 SUPERFAMILY SSF56024 315 493 1.07E-54 T 22-04-2016 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 Pfam PF02503 Polyphosphate kinase middle domain 119 320 3.4E-47 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 SUPERFAMILY SSF56024 500 684 3.81E-68 T 22-04-2016 VCLMA_RS03525 68f4153035cc8c0548a135f05125c075 701 SUPERFAMILY SSF143724 107 313 7.26E-65 T 22-04-2016 VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 Gene3D G3DSA:3.40.50.300 3 274 1.0E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 SUPERFAMILY SSF52540 277 494 1.59E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 PANTHER PTHR19211:SF49 1 555 0.0 T 22-04-2016 VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 Gene3D G3DSA:3.40.50.300 310 538 7.9E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 Pfam PF00005 ABC transporter 328 459 1.2E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 Pfam PF00005 ABC transporter 17 178 3.1E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 Pfam PF12848 ABC transporter 217 294 2.9E-28 T 22-04-2016 IPR032781 ABC-transporter extension domain VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 Pfam PF09496 Cenp-O kinetochore centromere component 534 627 3.6E-4 T 22-04-2016 IPR018464 Centromere protein O GO:0000776|GO:0034508 VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 SUPERFAMILY SSF52540 119 255 1.15E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 SUPERFAMILY SSF52540 2 92 1.15E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 SMART SM00382 26 223 2.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS12150 9d4cbad34e133c7fa72e0796524da23d 638 SMART SM00382 337 503 2.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SUPERFAMILY SSF55874 344 517 1.83E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 496 2.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 471 2.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 515 2.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 457 2.1E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SUPERFAMILY SSF52172 532 645 7.7E-7 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Pfam PF00512 His Kinase A (phospho-acceptor) domain 291 355 1.5E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PANTHER PTHR24423 7 21 3.5E-195 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PANTHER PTHR24423 192 230 3.5E-195 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PANTHER PTHR24423 626 829 3.5E-195 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PANTHER PTHR24423 269 521 3.5E-195 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SUPERFAMILY SSF52172 665 786 1.41E-36 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SMART SM00387 402 518 1.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SUPERFAMILY SSF47226 815 918 1.83E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SUPERFAMILY SSF47226 761 774 1.83E-19 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Pfam PF00072 Response regulator receiver domain 667 776 1.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Gene3D G3DSA:3.30.565.10 356 519 2.0E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SMART SM00388 290 355 2.5E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Pfam PF01627 Hpt domain 835 921 1.6E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 517 3.6E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Gene3D G3DSA:3.40.50.2300 658 787 1.4E-39 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SMART SM00448 665 778 9.1E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PANTHER PTHR24423:SF540 7 21 3.5E-195 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PANTHER PTHR24423:SF540 192 230 3.5E-195 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PANTHER PTHR24423:SF540 626 829 3.5E-195 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 PANTHER PTHR24423:SF540 269 521 3.5E-195 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SMART SM00073 829 923 0.0099 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 32 175 6.4E-52 T 22-04-2016 IPR019247 Histidine kinase BarA, N-terminal VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SMART SM00304 198 250 6.2E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Gene3D G3DSA:1.20.120.160 827 926 1.4E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SUPERFAMILY SSF158472 200 247 8.5E-7 T 22-04-2016 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Gene3D G3DSA:1.10.287.130 282 351 1.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 Pfam PF00672 HAMP domain 179 246 2.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS11360 19f4d6b4ad5a40362d033b7fe729a542 927 SUPERFAMILY SSF47384 275 356 1.49E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 1.6E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 Gene3D G3DSA:3.30.930.10 109 462 5.5E-113 T 22-04-2016 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 SUPERFAMILY SSF55681 99 464 1.43E-95 T 22-04-2016 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 6.1E-205 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 PANTHER PTHR22594 6 180 5.1E-250 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 PANTHER PTHR22594 199 464 5.1E-250 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 3.4E-81 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.726 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 PANTHER PTHR22594:SF6 6 180 5.1E-250 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 PANTHER PTHR22594:SF6 199 464 5.1E-250 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.4E-10 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 SUPERFAMILY SSF50249 15 101 1.78E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS06120 4b046521c3b252c8a50e77b4571d42fb 466 Gene3D G3DSA:2.40.50.140 15 103 1.0E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS16440 ae69d4576cd16cb86cc35af1ac3f04b6 188 SUPERFAMILY SSF161098 90 182 2.78E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS16440 ae69d4576cd16cb86cc35af1ac3f04b6 188 PANTHER PTHR30425 46 174 2.4E-51 T 22-04-2016 VCLMA_RS16440 ae69d4576cd16cb86cc35af1ac3f04b6 188 Gene3D G3DSA:1.10.3720.10 81 176 4.9E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS16440 ae69d4576cd16cb86cc35af1ac3f04b6 188 PANTHER PTHR30425:SF3 46 174 2.4E-51 T 22-04-2016 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.4 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 Gene3D G3DSA:3.10.310.10 123 264 6.9E-52 T 22-04-2016 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 Pfam PF01678 Diaminopimelate epimerase 5 124 2.9E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 Pfam PF01678 Diaminopimelate epimerase 154 268 6.9E-32 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 Gene3D G3DSA:3.10.310.10 4 122 2.0E-49 T 22-04-2016 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 PANTHER PTHR31689:SF0 1 275 1.4E-138 T 22-04-2016 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 SUPERFAMILY SSF54506 2 274 4.71E-54 T 22-04-2016 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 PANTHER PTHR31689 1 275 1.4E-138 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00625 0edf5d4382867ab32c47800c2d0dbc9d 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 5.2E-102 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS09130 44e637e3e647c8251527711da7758c51 185 PANTHER PTHR37530 1 183 2.3E-67 T 22-04-2016 VCLMA_RS09130 44e637e3e647c8251527711da7758c51 185 Pfam PF03843 Outer membrane lipoprotein Slp family 17 168 1.4E-44 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VCLMA_RS09130 44e637e3e647c8251527711da7758c51 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 7 159 9.9E-32 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VCLMA_RS09130 44e637e3e647c8251527711da7758c51 185 PIRSF PIRSF004982 2 185 2.8E-70 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 5 559 8.0E-240 T 22-04-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 383 397 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 Gene3D G3DSA:3.30.450.90 165 288 9.8E-50 T 22-04-2016 VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 SUPERFAMILY SSF52540 172 559 2.11E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 PANTHER PTHR30258 2 559 5.5E-168 T 22-04-2016 VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 39 141 5.1E-15 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 Pfam PF00437 Type II/IV secretion system protein 189 455 4.5E-85 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 Gene3D G3DSA:3.40.50.300 294 560 3.0E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 PANTHER PTHR30258:SF2 2 559 5.5E-168 T 22-04-2016 VCLMA_RS11220 8d74834b8aae5e58c22777510bfb06cb 562 SUPERFAMILY SSF160246 1 140 4.45E-30 T 22-04-2016 VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 PANTHER PTHR30505:SF1 43 523 1.0E-188 T 22-04-2016 VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 PANTHER PTHR30505 43 523 1.0E-188 T 22-04-2016 VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 528 610 7.3E-28 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 Gene3D G3DSA:3.40.930.10 2 147 8.7E-47 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 176 496 3.3E-78 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 Pfam PF02378 Phosphotransferase system, EIIC 189 446 3.6E-13 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 SUPERFAMILY SSF55804 2 146 6.8E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 4.1E-39 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 SUPERFAMILY SSF52794 525 618 4.88E-28 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 528 618 1.0E-15 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 146 1.0E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS08355 15493f26f86d23e24a0d41b6ba718e53 621 Gene3D G3DSA:3.40.50.2300 522 618 9.9E-35 T 22-04-2016 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 Gene3D G3DSA:1.10.10.10 154 211 9.4E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 PANTHER PTHR26402:SF151 5 211 6.5E-82 T 22-04-2016 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 5.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 5.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 5.0E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 SMART SM00421 148 205 5.0E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 PANTHER PTHR26402 5 211 6.5E-82 T 22-04-2016 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 9.2E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 Gene3D G3DSA:3.40.50.2300 3 153 2.6E-40 T 22-04-2016 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 SMART SM00448 5 118 1.9E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 SUPERFAMILY SSF52172 4 134 2.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 Pfam PF00072 Response regulator receiver domain 7 119 2.8E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06025 0a8034c54eeb3ae462f04a35d0b35093 212 SUPERFAMILY SSF46894 140 211 1.33E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Gene3D G3DSA:3.30.70.270 515 657 2.0E-33 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 255 445 2.8E-24 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 227 1.6E-16 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 SUPERFAMILY SSF53850 45 227 6.29E-24 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Pfam PF00990 Diguanylate cyclase, GGDEF domain 513 656 6.0E-30 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 SUPERFAMILY SSF55073 518 656 7.61E-30 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Gene3D G3DSA:3.40.190.10 45 102 1.9E-8 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Gene3D G3DSA:3.40.190.10 192 227 1.9E-8 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 SMART SM00267 502 663 7.3E-25 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 SMART SM00062 30 231 3.5E-10 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 SMART SM00062 250 497 1.7E-4 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 512 657 2.0E-28 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Gene3D G3DSA:3.40.190.10 328 424 3.5E-4 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Gene3D G3DSA:3.40.190.10 120 176 3.7E-6 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 SUPERFAMILY SSF53850 251 465 1.99E-26 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Gene3D G3DSA:3.40.190.10 248 327 8.4E-14 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 Gene3D G3DSA:3.40.190.10 432 465 8.4E-14 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 PANTHER PTHR10799 296 302 7.5E-13 T 22-04-2016 VCLMA_RS05015 95b91671b61bc03312686379a52db57a 673 PANTHER PTHR10799 540 655 7.5E-13 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 Gene3D G3DSA:3.50.50.60 139 327 6.7E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PANTHER PTHR22912 1 448 3.8E-249 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 Gene3D G3DSA:3.50.50.60 2 138 9.1E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 448 6.8E-213 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 Gene3D G3DSA:3.30.390.30 340 448 4.0E-41 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 SUPERFAMILY SSF51905 1 361 4.12E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 SUPERFAMILY SSF55424 337 447 1.6E-33 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 447 5.8E-32 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.7E-28 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.7E-28 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.7E-28 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.7E-28 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.7E-28 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PIRSF PIRSF000350 1 445 4.0E-82 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 1.1E-64 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.1E-64 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.1E-64 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 1.1E-64 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 1.1E-64 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.1E-64 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.1E-64 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 1.1E-64 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-64 T 22-04-2016 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 2.3E-69 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00900 0e0a237ef3c1cfaa598a9e4ca7e92d31 448 PANTHER PTHR22912:SF106 1 448 3.8E-249 T 22-04-2016 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Gene3D G3DSA:1.20.120.160 681 781 7.3E-32 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SMART SM00388 282 347 6.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SUPERFAMILY SSF55874 336 507 7.6E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Pfam PF01627 Hpt domain 692 762 7.7E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SMART SM00387 394 510 3.9E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Gene3D G3DSA:3.40.50.2300 519 646 7.5E-29 T 22-04-2016 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Gene3D G3DSA:3.30.565.10 354 506 2.4E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Pfam PF00989 PAS fold 157 266 8.1E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 7.7E-18 T 22-04-2016 IPR000014 PAS domain VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SUPERFAMILY SSF47226 668 779 1.57E-27 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 PIRSF PIRSF003182 1 783 0.0 T 22-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SUPERFAMILY SSF47384 270 347 2.35E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SUPERFAMILY SSF55785 140 267 5.23E-24 T 22-04-2016 IPR000014 PAS domain VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Gene3D G3DSA:1.10.287.130 274 343 2.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SMART SM00073 680 777 6.6E-9 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SMART SM00091 155 221 3.7E-8 T 22-04-2016 IPR000014 PAS domain VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Gene3D G3DSA:3.30.450.20 142 267 7.4E-22 T 22-04-2016 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SMART SM00448 527 638 9.5E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 1.6E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 PANTHER PTHR24423 153 682 0.0 T 22-04-2016 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 PANTHER PTHR24423 20 95 0.0 T 22-04-2016 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 SUPERFAMILY SSF52172 526 646 5.41E-25 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 7.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 7.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 7.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 7.6E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Pfam PF00072 Response regulator receiver domain 529 638 2.0E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 1.8E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 Gene3D G3DSA:1.10.287.970 1 89 8.1E-39 T 22-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 PANTHER PTHR24423:SF476 153 682 0.0 T 22-04-2016 VCLMA_RS10980 4f889a49cd2214ac25143057b5c12ec7 785 PANTHER PTHR24423:SF476 20 95 0.0 T 22-04-2016 VCLMA_RS05440 0784ad2d91d3eb71051229243c111c67 165 Gene3D G3DSA:3.40.50.2300 6 136 6.9E-20 T 22-04-2016 VCLMA_RS05440 0784ad2d91d3eb71051229243c111c67 165 SUPERFAMILY SSF52172 1 145 5.83E-19 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS05440 0784ad2d91d3eb71051229243c111c67 165 PANTHER PTHR26402:SF515 4 129 4.2E-26 T 22-04-2016 VCLMA_RS05440 0784ad2d91d3eb71051229243c111c67 165 SMART SM00448 4 125 1.0E-7 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05440 0784ad2d91d3eb71051229243c111c67 165 Pfam PF00072 Response regulator receiver domain 6 126 2.3E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05440 0784ad2d91d3eb71051229243c111c67 165 PANTHER PTHR26402 4 129 4.2E-26 T 22-04-2016 VCLMA_RS02840 293beb36fbba5a6e010f9eb19131ae6b 601 Gene3D G3DSA:3.40.50.2300 367 530 9.8E-51 T 22-04-2016 VCLMA_RS02840 293beb36fbba5a6e010f9eb19131ae6b 601 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 601 29.968 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA VCLMA_RS02840 293beb36fbba5a6e010f9eb19131ae6b 601 Pfam PF04348 LppC putative lipoprotein 39 599 8.4E-226 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA VCLMA_RS02840 293beb36fbba5a6e010f9eb19131ae6b 601 PANTHER PTHR38038 1 598 7.1E-219 T 22-04-2016 VCLMA_RS02840 293beb36fbba5a6e010f9eb19131ae6b 601 Gene3D G3DSA:3.40.50.2300 531 594 2.5E-53 T 22-04-2016 VCLMA_RS02840 293beb36fbba5a6e010f9eb19131ae6b 601 Gene3D G3DSA:3.40.50.2300 256 366 2.5E-53 T 22-04-2016 VCLMA_RS02840 293beb36fbba5a6e010f9eb19131ae6b 601 SUPERFAMILY SSF53822 454 598 3.2E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS02840 293beb36fbba5a6e010f9eb19131ae6b 601 SUPERFAMILY SSF53822 260 426 3.2E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS02840 293beb36fbba5a6e010f9eb19131ae6b 601 PANTHER PTHR38038:SF1 1 598 7.1E-219 T 22-04-2016 VCLMA_RS12080 0a859eca758b7c8692ac0f704b87634a 100 Pfam PF00276 Ribosomal protein L23 9 95 1.8E-31 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12080 0a859eca758b7c8692ac0f704b87634a 100 Gene3D G3DSA:3.30.70.330 6 98 1.4E-35 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 VCLMA_RS12080 0a859eca758b7c8692ac0f704b87634a 100 PANTHER PTHR11620 9 95 1.9E-35 T 22-04-2016 VCLMA_RS12080 0a859eca758b7c8692ac0f704b87634a 100 SUPERFAMILY SSF54189 3 92 7.55E-32 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12080 0a859eca758b7c8692ac0f704b87634a 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site VCLMA_RS12080 0a859eca758b7c8692ac0f704b87634a 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.479 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 Pfam PF01339 CheB methylesterase 163 327 6.4E-45 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 Gene3D G3DSA:3.40.50.2300 1 124 1.3E-27 T 22-04-2016 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 SUPERFAMILY SSF52172 1 104 5.98E-26 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 1 347 32.128 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 Gene3D G3DSA:3.40.50.180 155 348 2.7E-51 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 SUPERFAMILY SSF52738 157 348 1.15E-48 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 PANTHER PTHR24421 1 326 2.9E-161 T 22-04-2016 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 Pfam PF00072 Response regulator receiver domain 3 105 5.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 SMART SM00448 1 116 5.0E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 PIRSF PIRSF000876 1 351 1.4E-112 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS06610 8bf8841d296be236f4c40bb0e6336586 358 PANTHER PTHR24421:SF21 1 326 2.9E-161 T 22-04-2016 VCLMA_RS05305 ec84944bec557f5f1064e44c6dada3b2 371 Pfam PF03054 tRNA methyl transferase 11 367 5.5E-142 T 22-04-2016 VCLMA_RS05305 ec84944bec557f5f1064e44c6dada3b2 371 PANTHER PTHR11933:SF10 1 371 5.8E-220 T 22-04-2016 VCLMA_RS05305 ec84944bec557f5f1064e44c6dada3b2 371 PANTHER PTHR11933 1 371 5.8E-220 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VCLMA_RS05305 ec84944bec557f5f1064e44c6dada3b2 371 Gene3D G3DSA:3.40.50.620 6 218 8.7E-99 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS05305 ec84944bec557f5f1064e44c6dada3b2 371 Gene3D G3DSA:2.30.30.280 220 287 1.0E-32 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 VCLMA_RS05305 ec84944bec557f5f1064e44c6dada3b2 371 SUPERFAMILY SSF52402 9 251 4.85E-58 T 22-04-2016 VCLMA_RS05305 ec84944bec557f5f1064e44c6dada3b2 371 Gene3D G3DSA:2.40.30.10 289 370 2.8E-32 T 22-04-2016 VCLMA_RS05305 ec84944bec557f5f1064e44c6dada3b2 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 368 40.295 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VCLMA_RS05305 ec84944bec557f5f1064e44c6dada3b2 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 367 2.6E-151 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 PANTHER PTHR10628 507 778 1.3E-133 T 22-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 PANTHER PTHR10628 146 308 1.3E-133 T 22-04-2016 IPR026856 Sialidase family GO:0004308 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 SUPERFAMILY SSF49899 26 215 8.45E-73 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 Gene3D G3DSA:2.60.120.200 26 213 8.8E-79 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 PANTHER PTHR10628:SF5 507 778 1.3E-133 T 22-04-2016 VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 PANTHER PTHR10628:SF5 146 308 1.3E-133 T 22-04-2016 VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 SUPERFAMILY SSF50939 538 775 4.17E-55 T 22-04-2016 IPR011040 Sialidases VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 SUPERFAMILY SSF50939 224 356 4.17E-55 T 22-04-2016 IPR011040 Sialidases VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 Gene3D G3DSA:2.60.120.200 354 540 1.8E-76 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 Gene3D G3DSA:2.120.10.10 221 353 7.0E-97 T 22-04-2016 IPR011040 Sialidases VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 Gene3D G3DSA:2.120.10.10 541 776 7.0E-97 T 22-04-2016 IPR011040 Sialidases VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 SUPERFAMILY SSF49899 347 542 4.3E-65 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 Pfam PF13088 BNR repeat-like domain 554 748 1.3E-14 T 22-04-2016 IPR011040 Sialidases VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 Pfam PF09264 Vibrio cholerae sialidase, lectin insertion 347 543 3.3E-128 T 22-04-2016 IPR015344 Vibrio cholerae neuraminidase, lectin-like domain GO:0033691 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 VCLMA_RS08220 6ee39638e6469b216136055d07d0ac21 781 Pfam PF09264 Vibrio cholerae sialidase, lectin insertion 86 216 3.1E-6 T 22-04-2016 IPR015344 Vibrio cholerae neuraminidase, lectin-like domain GO:0033691 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 SUPERFAMILY SSF48013 1 146 1.22E-34 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 PANTHER PTHR22807:SF30 28 424 4.3E-140 T 22-04-2016 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 237 422 5.1E-70 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 PANTHER PTHR22807 28 424 4.3E-140 T 22-04-2016 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 Gene3D G3DSA:3.40.50.150 229 424 5.3E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 SUPERFAMILY SSF53335 138 424 6.08E-81 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 Gene3D G3DSA:3.30.70.1170 170 227 6.5E-29 T 22-04-2016 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 Gene3D G3DSA:1.10.940.10 1 144 1.8E-42 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 Gene3D G3DSA:1.10.287.730 145 169 1.1E-15 T 22-04-2016 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 425 1.9E-155 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 5.6E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 5.6E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 5.6E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 5.6E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 5.6E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00215 6d5a62c225b99c1430fa9fe34794b17e 426 Pfam PF01029 NusB family 1 123 2.0E-23 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.0E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.0E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.0E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.0E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 2.3E-106 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 PANTHER PTHR12128:SF34 1 292 9.0E-141 T 22-04-2016 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 63.924 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 PANTHER PTHR12128 1 292 9.0E-141 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 PIRSF PIRSF001365 1 290 2.5E-88 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 SMART SM01130 1 290 4.8E-135 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 8.6E-115 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 SUPERFAMILY SSF51569 2 288 5.65E-96 T 22-04-2016 VCLMA_RS09940 257b8b746e6d3b162d6de82e9cd14b7c 292 Gene3D G3DSA:3.20.20.70 1 289 1.1E-111 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 Gene3D G3DSA:3.20.20.140 5 257 5.3E-19 T 22-04-2016 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 PANTHER PTHR32294 2 1157 0.0 T 22-04-2016 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 Gene3D G3DSA:2.40.50.140 988 1076 1.7E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 Gene3D G3DSA:1.10.150.280 825 882 1.3E-6 T 22-04-2016 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 PANTHER PTHR32294:SF0 2 1157 0.0 T 22-04-2016 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 SUPERFAMILY SSF89550 5 263 2.35E-14 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 2.1E-173 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 Pfam PF02811 PHP domain 8 172 2.2E-44 T 22-04-2016 IPR004013 PHP domain GO:0003824 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 Pfam PF01336 OB-fold nucleic acid binding domain 999 1071 1.3E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 SMART SM00481 7 74 1.8E-25 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VCLMA_RS10420 793e02b6216e5b756c4c3d702cc93513 1157 Pfam PF14579 Helix-hairpin-helix motif 808 897 1.4E-25 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS07720 46edf02c91fe8a70d772f9e8b9d2db1b 365 Pfam PF12698 ABC-2 family transporter protein 24 358 1.3E-47 T 22-04-2016 VCLMA_RS07720 46edf02c91fe8a70d772f9e8b9d2db1b 365 PANTHER PTHR30294:SF12 1 363 3.3E-104 T 22-04-2016 VCLMA_RS07720 46edf02c91fe8a70d772f9e8b9d2db1b 365 PANTHER PTHR30294 1 363 3.3E-104 T 22-04-2016 VCLMA_RS07720 46edf02c91fe8a70d772f9e8b9d2db1b 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 250 274 3.7E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VCLMA_RS07720 46edf02c91fe8a70d772f9e8b9d2db1b 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 307 326 3.7E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VCLMA_RS07720 46edf02c91fe8a70d772f9e8b9d2db1b 365 PRINTS PR00164 ABC-2 type transport system membrane protein signature 287 306 3.7E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VCLMA_RS02820 717e6c8efc1dff63491a4ffeae0a8b86 154 PIRSF PIRSF005276 3 154 8.4E-61 T 22-04-2016 IPR007481 Stringent starvation protein B VCLMA_RS02820 717e6c8efc1dff63491a4ffeae0a8b86 154 Gene3D G3DSA:2.30.30.220 5 110 1.2E-50 T 22-04-2016 IPR007481 Stringent starvation protein B VCLMA_RS02820 717e6c8efc1dff63491a4ffeae0a8b86 154 PANTHER PTHR37486:SF1 2 154 2.8E-86 T 22-04-2016 VCLMA_RS02820 717e6c8efc1dff63491a4ffeae0a8b86 154 PANTHER PTHR37486 2 154 2.8E-86 T 22-04-2016 VCLMA_RS02820 717e6c8efc1dff63491a4ffeae0a8b86 154 Pfam PF04386 Stringent starvation protein B 9 154 5.7E-39 T 22-04-2016 IPR007481 Stringent starvation protein B VCLMA_RS02820 717e6c8efc1dff63491a4ffeae0a8b86 154 SUPERFAMILY SSF101738 5 111 1.11E-47 T 22-04-2016 IPR007481 Stringent starvation protein B VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 PANTHER PTHR11496 361 866 0.0 T 22-04-2016 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 SUPERFAMILY SSF56796 452 863 6.28E-115 T 22-04-2016 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:3.40.309.10 309 405 1.1E-26 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:3.40.309.10 226 273 1.1E-26 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Pfam PF00171 Aldehyde dehydrogenase family 5 402 5.0E-25 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 7.0E-113 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:1.20.1090.10 643 863 2.0E-68 T 22-04-2016 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:3.40.605.10 2 225 1.3E-24 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 SUPERFAMILY SSF53720 6 454 2.23E-84 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 PANTHER PTHR11496:SF79 361 866 0.0 T 22-04-2016 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 PIRSF PIRSF000111 1 865 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VCLMA_RS09355 c8f3a5a7bc37a127a3f23c7fce5e2ce2 894 Gene3D G3DSA:3.40.50.1970 451 642 1.9E-60 T 22-04-2016 VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 Gene3D G3DSA:1.10.1060.10 364 449 2.2E-18 T 22-04-2016 VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 Pfam PF10531 SLBB domain 296 345 3.1E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 PANTHER PTHR11780:SF1 1 483 3.9E-256 T 22-04-2016 VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 SUPERFAMILY SSF46548 336 446 2.96E-21 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 732 248.239 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 PANTHER PTHR11780 1 483 3.9E-256 T 22-04-2016 VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 SUPERFAMILY SSF142019 95 302 1.44E-61 T 22-04-2016 VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 447 1.6E-201 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 Pfam PF12838 4Fe-4S dicluster domain 377 430 7.3E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 116 5.0E-36 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 1.1E-49 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 378 389 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS04755 fd4a73bb29ed49333ea92807e2f81ba3 770 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.7E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 PANTHER PTHR33175:SF4 1 90 1.3E-56 T 22-04-2016 VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 PANTHER PTHR33175 1 90 1.3E-56 T 22-04-2016 VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 SUPERFAMILY SSF47729 1 90 1.37E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 Gene3D G3DSA:4.10.520.10 1 90 8.0E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.0E-20 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.0E-20 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.0E-20 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VCLMA_RS01315 e612eeabf4f612660f7d368d7e21b881 90 SMART SM00411 1 90 2.4E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS09080 5bd6cbb2e928f059edcb97940bce621b 404 PANTHER PTHR11751:SF303 9 399 1.4E-196 T 22-04-2016 VCLMA_RS09080 5bd6cbb2e928f059edcb97940bce621b 404 Pfam PF00155 Aminotransferase class I and II 61 392 1.9E-48 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VCLMA_RS09080 5bd6cbb2e928f059edcb97940bce621b 404 Gene3D G3DSA:3.90.1150.10 280 403 1.8E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS09080 5bd6cbb2e928f059edcb97940bce621b 404 Gene3D G3DSA:3.40.640.10 51 279 3.6E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS09080 5bd6cbb2e928f059edcb97940bce621b 404 SUPERFAMILY SSF53383 6 399 1.25E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS09080 5bd6cbb2e928f059edcb97940bce621b 404 PANTHER PTHR11751 9 399 1.4E-196 T 22-04-2016 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 427 2.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 Gene3D G3DSA:1.10.287.130 197 258 1.1E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 Pfam PF00989 PAS fold 99 153 1.4E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 8.2E-137 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 SUPERFAMILY SSF47384 192 272 1.16E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 PANTHER PTHR24423:SF554 1 432 1.5E-227 T 22-04-2016 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 SMART SM00388 205 272 3.6E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 SMART SM00091 98 166 2.0E-5 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 Gene3D G3DSA:3.30.450.20 98 196 2.1E-11 T 22-04-2016 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 2.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 99 203 1.3E-5 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 SMART SM00387 317 429 2.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 Gene3D G3DSA:3.30.565.10 259 427 2.1E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 PANTHER PTHR24423 1 432 1.5E-227 T 22-04-2016 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 Pfam PF11808 Domain of unknown function (DUF3329) 7 91 2.3E-31 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 SUPERFAMILY SSF55874 261 427 5.63E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 SUPERFAMILY SSF55785 86 197 3.49E-11 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03510 62e9ae4584943f40e3f1148287e90e63 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 271 2.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 SUPERFAMILY SSF50249 2 63 4.68E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 Pfam PF07499 RuvA, C-terminal domain 160 203 5.2E-17 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.7E-62 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 Pfam PF01330 RuvA N terminal domain 2 62 7.4E-20 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 PANTHER PTHR33796 2 204 3.0E-81 T 22-04-2016 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 Gene3D G3DSA:2.40.50.140 2 65 2.4E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 Gene3D G3DSA:1.10.150.20 67 142 1.2E-29 T 22-04-2016 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 204 31.453 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 SUPERFAMILY SSF47781 66 136 1.45E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 SMART SM00278 73 92 160.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 SMART SM00278 108 127 0.046 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 SUPERFAMILY SSF46929 159 203 2.49E-12 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 Pfam PF14520 Helix-hairpin-helix domain 72 130 8.5E-14 T 22-04-2016 VCLMA_RS08465 81f1ab97a0b3c94d074b868617b16f10 204 Gene3D G3DSA:1.10.8.10 158 204 2.4E-22 T 22-04-2016 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 SUPERFAMILY SSF53633 6 293 8.64E-77 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 6.8E-122 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 PANTHER PTHR21499:SF3 6 451 9.1E-148 T 22-04-2016 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 Pfam PF00696 Amino acid kinase family 6 278 2.1E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 SUPERFAMILY SSF55021 377 449 8.59E-15 T 22-04-2016 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 SUPERFAMILY SSF55021 299 394 5.24E-19 T 22-04-2016 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 PANTHER PTHR21499 6 451 9.1E-148 T 22-04-2016 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 Gene3D G3DSA:3.40.1160.10 6 53 1.2E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 Gene3D G3DSA:3.40.1160.10 107 295 1.2E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 PIRSF PIRSF000726 2 451 7.3E-127 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS01975 e72728ea4945e12111801084c2a09c0c 451 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 1.4E-122 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 PANTHER PTHR30118:SF6 14 319 2.2E-164 T 22-04-2016 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 SUPERFAMILY SSF53850 106 309 1.18E-36 T 22-04-2016 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:3.40.190.10 189 281 4.7E-14 T 22-04-2016 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 SUPERFAMILY SSF46785 22 99 2.95E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 1.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 Pfam PF03466 LysR substrate binding domain 117 308 1.2E-21 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:3.40.190.10 106 188 8.8E-24 T 22-04-2016 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:3.40.190.10 287 315 8.8E-24 T 22-04-2016 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 Gene3D G3DSA:1.10.10.10 17 101 4.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 PANTHER PTHR30118 14 319 2.2E-164 T 22-04-2016 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS11515 be2107d236dbd4fccb05f0e543f40dd1 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS00990 25cc62b632bbf5da47110b85a54a7c72 300 PANTHER PTHR10088 1 298 7.2E-155 T 22-04-2016 VCLMA_RS00990 25cc62b632bbf5da47110b85a54a7c72 300 Pfam PF13580 SIS domain 37 166 7.6E-11 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS00990 25cc62b632bbf5da47110b85a54a7c72 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 297 3.9E-131 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VCLMA_RS00990 25cc62b632bbf5da47110b85a54a7c72 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.784 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VCLMA_RS00990 25cc62b632bbf5da47110b85a54a7c72 300 SUPERFAMILY SSF53697 8 250 1.4E-68 T 22-04-2016 VCLMA_RS00990 25cc62b632bbf5da47110b85a54a7c72 300 Gene3D G3DSA:3.40.50.10490 6 252 8.4E-90 T 22-04-2016 VCLMA_RS00990 25cc62b632bbf5da47110b85a54a7c72 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 SUPERFAMILY SSF103088 63 172 1.57E-34 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 ProSitePatterns PS01068 OmpA-like domain. 104 148 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 69 172 4.2E-45 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 Pfam PF00691 OmpA family 71 166 1.0E-21 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 PANTHER PTHR30128:SF18 56 172 2.0E-58 T 22-04-2016 VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 PANTHER PTHR30128 56 172 2.0E-58 T 22-04-2016 VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 Gene3D G3DSA:3.30.1330.60 60 171 2.1E-34 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 PRINTS PR01021 OMPA domain signature 117 133 5.2E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 PRINTS PR01021 OMPA domain signature 72 94 5.2E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS08410 3228ffc9e48955186f86081490ed99e3 172 PRINTS PR01021 OMPA domain signature 102 117 5.2E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS03660 ceb5c6b8236a070e693d4883f62856ba 61 PANTHER PTHR37532:SF1 1 59 2.3E-32 T 22-04-2016 VCLMA_RS03660 ceb5c6b8236a070e693d4883f62856ba 61 Pfam PF04384 Iron-sulphur cluster assembly 1 59 2.4E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VCLMA_RS03660 ceb5c6b8236a070e693d4883f62856ba 61 SUPERFAMILY SSF140319 1 60 2.22E-27 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VCLMA_RS03660 ceb5c6b8236a070e693d4883f62856ba 61 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 60 1.6E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VCLMA_RS03660 ceb5c6b8236a070e693d4883f62856ba 61 PANTHER PTHR37532 1 59 2.3E-32 T 22-04-2016 VCLMA_RS03660 ceb5c6b8236a070e693d4883f62856ba 61 Gene3D G3DSA:1.10.10.600 1 59 1.9E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VCLMA_RS03660 ceb5c6b8236a070e693d4883f62856ba 61 PIRSF PIRSF039003 1 61 1.6E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Gene3D G3DSA:2.10.109.10 83 205 4.9E-45 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 2.8E-81 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Gene3D G3DSA:1.10.10.10 1 69 2.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Hamap MF_00015 LexA repressor [lexA]. 3 206 32.151 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Pfam PF00717 Peptidase S24-like 121 187 9.1E-16 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 129 140 3.2E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 118 128 3.2E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 157 169 3.2E-12 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 Pfam PF01726 LexA DNA binding domain 1 65 1.5E-29 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 SUPERFAMILY SSF51306 82 205 1.48E-36 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PANTHER PTHR33516 1 209 1.5E-108 T 22-04-2016 VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 SUPERFAMILY SSF46785 3 69 1.06E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS00475 e9aa15a3e4f7a11abdcb2f1cc6b7fa7b 209 PANTHER PTHR33516:SF2 1 209 1.5E-108 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 Gene3D G3DSA:3.30.2090.10 634 721 4.5E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 PANTHER PTHR32063:SF28 1 963 0.0 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 Gene3D G3DSA:3.30.70.1430 1 75 1.3E-17 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 SUPERFAMILY SSF82714 116 197 1.7E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 PANTHER PTHR32063 1 963 0.0 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 Gene3D G3DSA:3.30.2090.10 115 197 6.5E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 Gene3D G3DSA:3.30.70.1430 489 584 4.2E-14 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 Gene3D G3DSA:1.20.1640.10 218 431 1.4E-55 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 SUPERFAMILY SSF82866 224 423 1.96E-47 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 SUPERFAMILY SSF82866 716 942 1.7E-47 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 SUPERFAMILY SSF82693 70 115 3.4E-21 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 SUPERFAMILY SSF82693 201 257 3.4E-21 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 Pfam PF00873 AcrB/AcrD/AcrF family 1 937 1.8E-256 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 PRINTS PR00702 Acriflavin resistance protein family signature 290 311 8.2E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 PRINTS PR00702 Acriflavin resistance protein family signature 474 491 8.2E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 PRINTS PR00702 Acriflavin resistance protein family signature 396 419 8.2E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 PRINTS PR00702 Acriflavin resistance protein family signature 537 551 8.2E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 PRINTS PR00702 Acriflavin resistance protein family signature 371 394 8.2E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 PRINTS PR00702 Acriflavin resistance protein family signature 318 342 8.2E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 PRINTS PR00702 Acriflavin resistance protein family signature 263 286 8.2E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 SUPERFAMILY SSF82714 635 717 7.19E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 Gene3D G3DSA:1.10.3850.10 726 940 2.5E-58 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 SUPERFAMILY SSF82693 487 584 7.15E-20 T 22-04-2016 VCLMA_RS00820 86a31673e6679432ac7658a727a06cd1 970 SUPERFAMILY SSF82693 1 64 1.2E-13 T 22-04-2016 VCLMA_RS10730 449dca7f4363e84eeab5efdd5eeefb98 271 SUPERFAMILY SSF69572 9 268 6.8E-64 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VCLMA_RS10730 449dca7f4363e84eeab5efdd5eeefb98 271 PANTHER PTHR10953:SF159 201 266 8.8E-138 T 22-04-2016 VCLMA_RS10730 449dca7f4363e84eeab5efdd5eeefb98 271 PANTHER PTHR10953:SF159 13 168 8.8E-138 T 22-04-2016 VCLMA_RS10730 449dca7f4363e84eeab5efdd5eeefb98 271 Pfam PF00899 ThiF family 26 267 2.4E-38 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VCLMA_RS10730 449dca7f4363e84eeab5efdd5eeefb98 271 PANTHER PTHR10953 201 266 8.8E-138 T 22-04-2016 VCLMA_RS10730 449dca7f4363e84eeab5efdd5eeefb98 271 PANTHER PTHR10953 13 168 8.8E-138 T 22-04-2016 VCLMA_RS10730 449dca7f4363e84eeab5efdd5eeefb98 271 Gene3D G3DSA:3.40.50.720 5 267 7.7E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 SUPERFAMILY SSF50249 132 188 4.63E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 4.0E-19 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 SMART SM01185 69 124 1.1E-15 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 PIRSF PIRSF005901 1 188 1.7E-60 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 SUPERFAMILY SSF50249 67 129 3.13E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 2.5E-103 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 Gene3D G3DSA:2.40.50.140 131 188 4.0E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 61 1.9E-15 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 PANTHER PTHR30053 1 188 3.4E-120 T 22-04-2016 VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 Gene3D G3DSA:2.30.30.30 1 65 1.4E-12 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 SUPERFAMILY SSF50104 1 65 2.35E-10 T 22-04-2016 IPR008991 Translation protein SH3-like domain VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 SMART SM00841 132 187 4.0E-26 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 Gene3D G3DSA:2.40.50.140 67 129 6.3E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 46.911 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 124 3.8E-14 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VCLMA_RS05695 bd83ffb5ea769c6ebad18209b1f97646 188 PANTHER PTHR30053:SF5 1 188 3.4E-120 T 22-04-2016 VCLMA_RS07710 d33c1347d77d49cb3b738c8cd2a3fb69 315 PANTHER PTHR32347 1 314 4.8E-72 T 22-04-2016 VCLMA_RS07710 d33c1347d77d49cb3b738c8cd2a3fb69 315 SUPERFAMILY SSF111369 101 158 6.02E-6 T 22-04-2016 VCLMA_RS07710 d33c1347d77d49cb3b738c8cd2a3fb69 315 PANTHER PTHR32347:SF12 1 314 4.8E-72 T 22-04-2016 VCLMA_RS07710 d33c1347d77d49cb3b738c8cd2a3fb69 315 Gene3D G3DSA:2.40.50.100 44 67 1.4E-6 T 22-04-2016 VCLMA_RS07710 d33c1347d77d49cb3b738c8cd2a3fb69 315 Gene3D G3DSA:2.40.50.100 194 225 1.4E-6 T 22-04-2016 VCLMA_RS07710 d33c1347d77d49cb3b738c8cd2a3fb69 315 Pfam PF13437 HlyD family secretion protein 196 276 1.2E-8 T 22-04-2016 VCLMA_RS07710 d33c1347d77d49cb3b738c8cd2a3fb69 315 SUPERFAMILY SSF111369 169 267 7.06E-5 T 22-04-2016 VCLMA_RS08675 9cd6133808c53908f846b5f5f3e6c86b 178 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 4.2E-26 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS08675 9cd6133808c53908f846b5f5f3e6c86b 178 Gene3D G3DSA:3.40.630.30 2 177 6.1E-48 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS08675 9cd6133808c53908f846b5f5f3e6c86b 178 PANTHER PTHR13256:SF43 1 177 4.5E-51 T 22-04-2016 VCLMA_RS08675 9cd6133808c53908f846b5f5f3e6c86b 178 SUPERFAMILY SSF55729 2 177 1.53E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS08675 9cd6133808c53908f846b5f5f3e6c86b 178 PANTHER PTHR13256 1 177 4.5E-51 T 22-04-2016 VCLMA_RS03975 ba23ba1dd12ea29020e2674bb79fe67f 144 PANTHER PTHR12901 1 144 2.1E-68 T 22-04-2016 VCLMA_RS03975 ba23ba1dd12ea29020e2674bb79fe67f 144 PANTHER PTHR12901:SF7 1 144 2.1E-68 T 22-04-2016 VCLMA_RS03975 ba23ba1dd12ea29020e2674bb79fe67f 144 SUPERFAMILY SSF55961 1 143 1.94E-34 T 22-04-2016 VCLMA_RS03975 ba23ba1dd12ea29020e2674bb79fe67f 144 Gene3D G3DSA:3.30.530.20 1 144 1.0E-48 T 22-04-2016 IPR023393 START-like domain VCLMA_RS03975 ba23ba1dd12ea29020e2674bb79fe67f 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 7.9E-32 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain VCLMA_RS00260 8eec66afe1828839afa15e75718b7dfe 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 39.812 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VCLMA_RS00260 8eec66afe1828839afa15e75718b7dfe 185 SUPERFAMILY SSF55821 2 178 4.27E-54 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VCLMA_RS00260 8eec66afe1828839afa15e75718b7dfe 185 PANTHER PTHR17490:SF8 2 180 1.1E-109 T 22-04-2016 VCLMA_RS00260 8eec66afe1828839afa15e75718b7dfe 185 Pfam PF01300 Telomere recombination 10 185 3.5E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VCLMA_RS00260 8eec66afe1828839afa15e75718b7dfe 185 PANTHER PTHR17490 2 180 1.1E-109 T 22-04-2016 VCLMA_RS00260 8eec66afe1828839afa15e75718b7dfe 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 185 1.8E-39 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VCLMA_RS00260 8eec66afe1828839afa15e75718b7dfe 185 Gene3D G3DSA:3.90.870.10 2 185 1.3E-57 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VCLMA_RS03540 28af90130328b6b2d4e1ab4330de3bfa 273 PANTHER PTHR24220 28 272 2.7E-136 T 22-04-2016 VCLMA_RS03540 28af90130328b6b2d4e1ab4330de3bfa 273 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 27 273 3.5E-122 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VCLMA_RS03540 28af90130328b6b2d4e1ab4330de3bfa 273 SMART SM00382 51 254 6.5E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03540 28af90130328b6b2d4e1ab4330de3bfa 273 Gene3D G3DSA:3.40.50.300 20 264 8.7E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03540 28af90130328b6b2d4e1ab4330de3bfa 273 SUPERFAMILY SSF52540 23 259 1.69E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03540 28af90130328b6b2d4e1ab4330de3bfa 273 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS03540 28af90130328b6b2d4e1ab4330de3bfa 273 PANTHER PTHR24220:SF585 28 272 2.7E-136 T 22-04-2016 VCLMA_RS03540 28af90130328b6b2d4e1ab4330de3bfa 273 Pfam PF00005 ABC transporter 42 198 2.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS03720 8c0fa8fc7cf1ef229ca08c5535221675 446 PANTHER PTHR30008:SF0 3 446 4.2E-189 T 22-04-2016 VCLMA_RS03720 8c0fa8fc7cf1ef229ca08c5535221675 446 Pfam PF13742 OB-fold nucleic acid binding domain 11 104 2.1E-29 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VCLMA_RS03720 8c0fa8fc7cf1ef229ca08c5535221675 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 356 1.5E-138 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VCLMA_RS03720 8c0fa8fc7cf1ef229ca08c5535221675 446 Pfam PF02601 Exonuclease VII, large subunit 127 440 5.8E-104 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VCLMA_RS03720 8c0fa8fc7cf1ef229ca08c5535221675 446 PANTHER PTHR30008 3 446 4.2E-189 T 22-04-2016 VCLMA_RS03720 8c0fa8fc7cf1ef229ca08c5535221675 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 8 444 31.968 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 SUPERFAMILY SSF51905 268 385 1.81E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 SUPERFAMILY SSF51905 5 177 1.81E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 9.5E-20 T 22-04-2016 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 9.5E-20 T 22-04-2016 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 9.5E-20 T 22-04-2016 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 9.5E-20 T 22-04-2016 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 1.9E-138 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 PANTHER PTHR13789:SF5 2 409 2.6E-174 T 22-04-2016 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 PANTHER PTHR13789 2 409 2.6E-174 T 22-04-2016 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 Pfam PF01494 FAD binding domain 5 348 4.1E-30 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 Gene3D G3DSA:3.50.50.60 4 169 1.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 Gene3D G3DSA:3.50.50.60 269 357 1.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11465 7171ef695063b5c99f80956e11a26071 409 Gene3D G3DSA:3.30.9.10 170 217 2.4E-4 T 22-04-2016 VCLMA_RS07250 dce6dc14493c49ac3bec9c0c2872214b 377 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 367 6.2E-34 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VCLMA_RS07250 dce6dc14493c49ac3bec9c0c2872214b 377 SUPERFAMILY SSF111369 50 235 2.62E-16 T 22-04-2016 VCLMA_RS07250 dce6dc14493c49ac3bec9c0c2872214b 377 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 257 7.4E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCLMA_RS07250 dce6dc14493c49ac3bec9c0c2872214b 377 PANTHER PTHR32347:SF12 1 367 1.1E-85 T 22-04-2016 VCLMA_RS07250 dce6dc14493c49ac3bec9c0c2872214b 377 PANTHER PTHR32347 1 367 1.1E-85 T 22-04-2016 VCLMA_RS07250 dce6dc14493c49ac3bec9c0c2872214b 377 Gene3D G3DSA:2.40.50.100 58 91 1.6E-13 T 22-04-2016 VCLMA_RS07250 dce6dc14493c49ac3bec9c0c2872214b 377 Gene3D G3DSA:2.40.50.100 175 197 1.6E-13 T 22-04-2016 VCLMA_RS07250 dce6dc14493c49ac3bec9c0c2872214b 377 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 348 363 1.4E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS07250 dce6dc14493c49ac3bec9c0c2872214b 377 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 1.4E-5 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS10725 d25557b11bdeda886706a411f3fdcb83 143 SUPERFAMILY SSF82649 3 141 7.32E-47 T 22-04-2016 VCLMA_RS10725 d25557b11bdeda886706a411f3fdcb83 143 PANTHER PTHR12735:SF11 7 141 1.3E-50 T 22-04-2016 VCLMA_RS10725 d25557b11bdeda886706a411f3fdcb83 143 Gene3D G3DSA:3.90.1010.10 5 142 1.4E-50 T 22-04-2016 VCLMA_RS10725 d25557b11bdeda886706a411f3fdcb83 143 Pfam PF02657 Fe-S metabolism associated domain 20 139 3.0E-44 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 VCLMA_RS10725 d25557b11bdeda886706a411f3fdcb83 143 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 6 140 8.8E-43 T 22-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VCLMA_RS10725 d25557b11bdeda886706a411f3fdcb83 143 PANTHER PTHR12735 7 141 1.3E-50 T 22-04-2016 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 Pfam PF01479 S4 domain 360 393 2.3E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 SMART SM00363 358 423 1.1E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 PANTHER PTHR11766:SF0 2 426 2.9E-199 T 22-04-2016 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 PANTHER PTHR11766 2 426 2.9E-199 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 Gene3D G3DSA:3.40.50.620 3 237 2.9E-96 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 421 2.0E-121 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 SUPERFAMILY SSF55174 326 420 4.32E-16 T 22-04-2016 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 Pfam PF00579 tRNA synthetases class I (W and Y) 33 328 8.6E-81 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 SUPERFAMILY SSF52374 5 328 1.35E-96 T 22-04-2016 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 421 43.453 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 9.0E-31 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 9.0E-31 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 9.0E-31 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 9.0E-31 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 Gene3D G3DSA:3.10.290.10 322 421 4.9E-25 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS02350 8d03e1e2117b985846b8014c18519dc2 426 Gene3D G3DSA:1.10.240.10 238 321 2.5E-39 T 22-04-2016 VCLMA_RS07480 d5c0e38e81f337b3715344d370bc58c2 382 Gene3D G3DSA:3.40.1710.10 42 111 2.5E-4 T 22-04-2016 VCLMA_RS07480 d5c0e38e81f337b3715344d370bc58c2 382 Pfam PF12698 ABC-2 family transporter protein 20 368 1.7E-41 T 22-04-2016 VCLMA_RS07480 d5c0e38e81f337b3715344d370bc58c2 382 PANTHER PTHR30294:SF2 1 380 2.1E-196 T 22-04-2016 VCLMA_RS07480 d5c0e38e81f337b3715344d370bc58c2 382 PANTHER PTHR30294 1 380 2.1E-196 T 22-04-2016 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 SUPERFAMILY SSF53328 82 276 5.63E-60 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 PANTHER PTHR10520:SF7 6 271 4.7E-139 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 4.0E-66 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 4.0E-66 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 4.0E-66 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 4.0E-66 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 4.0E-66 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 4.0E-66 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 2.7E-123 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 PANTHER PTHR10520 6 271 4.7E-139 T 22-04-2016 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 Gene3D G3DSA:3.30.70.260 3 68 1.2E-11 T 22-04-2016 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 Gene3D G3DSA:3.40.50.170 82 275 4.5E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 Pfam PF00551 Formyl transferase 82 259 7.0E-50 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 PIRSF PIRSF036480 1 277 3.9E-111 T 22-04-2016 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 45.038 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 SUPERFAMILY SSF55021 4 55 7.08E-9 T 22-04-2016 VCLMA_RS09155 6c3e9bfbecb6d45be124394594722c49 277 Pfam PF01842 ACT domain 5 64 7.0E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 PANTHER PTHR10314:SF4 74 131 2.7E-29 T 22-04-2016 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 PANTHER PTHR10314:SF4 1 51 2.7E-29 T 22-04-2016 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 PANTHER PTHR10314 74 131 2.7E-29 T 22-04-2016 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 PANTHER PTHR10314 1 51 2.7E-29 T 22-04-2016 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 6.1E-98 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 SUPERFAMILY SSF51366 1 266 4.71E-92 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.709 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.2E-102 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VCLMA_RS05505 c63557af4a64d99af6d2240626bed85f 268 Gene3D G3DSA:3.20.20.70 1 267 1.8E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 SUPERFAMILY SSF103190 19 149 4.71E-34 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 312 360 1.7E-7 T 22-04-2016 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 Gene3D G3DSA:1.10.287.130 301 368 7.0E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 Pfam PF17203 Single cache domain 3 20 149 3.1E-20 T 22-04-2016 IPR033463 Single cache domain 3 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 SMART SM00091 195 263 2.5E-4 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 SUPERFAMILY SSF55785 189 301 2.28E-8 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 SUPERFAMILY SSF55874 389 518 7.07E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 PANTHER PTHR24423:SF487 69 140 3.1E-155 T 22-04-2016 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 PANTHER PTHR24423:SF487 173 534 3.1E-155 T 22-04-2016 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 518 2.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 465 2.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 2.3E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 PANTHER PTHR24423 69 140 3.1E-155 T 22-04-2016 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 PANTHER PTHR24423 173 534 3.1E-155 T 22-04-2016 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 SMART SM00387 410 521 5.0E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 519 4.4E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 Gene3D G3DSA:3.30.450.20 190 300 3.8E-9 T 22-04-2016 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 SUPERFAMILY SSF55890 318 401 1.27E-8 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 Gene3D G3DSA:3.30.450.20 13 146 2.4E-45 T 22-04-2016 VCLMA_RS03840 1fc65e3d7526b976920ea875864fce7d 536 Gene3D G3DSA:3.30.565.10 404 518 7.1E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 SUPERFAMILY SSF81271 279 360 7.19E-37 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:3.40.50.300 201 267 3.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:3.40.50.300 4 131 3.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 PANTHER PTHR23305 1 363 2.7E-214 T 22-04-2016 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 7.7E-169 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 1.3E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:1.10.150.300 132 200 2.4E-26 T 22-04-2016 IPR023192 TGS-like domain VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 9.7E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 SUPERFAMILY SSF52540 3 301 3.83E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 Gene3D G3DSA:3.10.20.30 268 363 2.7E-50 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.477 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VCLMA_RS10060 eecca8d9f8a54291912fbae4e8350841 363 PIRSF PIRSF006641 1 363 1.9E-157 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 25.848 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 PANTHER PTHR30075 1 688 0.0 T 22-04-2016 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 Gene3D G3DSA:1.10.730.10 582 676 9.0E-6 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 1.1E-293 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 Pfam PF05746 DALR anticodon binding domain 580 677 7.7E-10 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 SUPERFAMILY SSF109604 349 488 3.45E-12 T 22-04-2016 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 5.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 5.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 5.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 5.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 5.8E-36 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00095 a27982b7cd0e4e8d71b50908cf5b4d27 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 4.0E-204 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 Gene3D G3DSA:1.10.10.60 521 584 4.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 565 585 1.79E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 548 565 1.79E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 Pfam PF00158 Sigma-54 interaction domain 284 445 2.7E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 367 382 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 Pfam PF01590 GAF domain 83 180 1.9E-8 T 22-04-2016 IPR003018 GAF domain GO:0005515 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 Gene3D G3DSA:3.30.450.20 211 257 7.0E-4 T 22-04-2016 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 Gene3D G3DSA:3.40.50.300 283 451 2.9E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 PANTHER PTHR32071:SF5 284 584 3.7E-135 T 22-04-2016 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 304 317 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 SUPERFAMILY SSF46689 489 584 1.11E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 SUPERFAMILY SSF52540 283 520 5.77E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 SMART SM00382 300 444 1.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 Pfam PF02954 Bacterial regulatory protein, Fis family 555 581 1.3E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 PANTHER PTHR32071 284 584 3.7E-135 T 22-04-2016 VCLMA_RS08335 8eb5911696e46a0b084804d5aa4dbf85 586 Gene3D G3DSA:1.10.8.60 460 520 1.3E-12 T 22-04-2016 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 Gene3D G3DSA:1.10.760.10 151 246 5.6E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 Gene3D G3DSA:1.10.760.10 60 82 5.6E-34 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 SUPERFAMILY SSF46626 55 78 7.86E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 SUPERFAMILY SSF46626 147 240 7.86E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 Gene3D G3DSA:1.10.760.10 247 324 2.9E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 SUPERFAMILY SSF46626 240 322 8.86E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 4.5E-14 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 243 317 5.0E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 PANTHER PTHR33751:SF1 122 326 7.9E-120 T 22-04-2016 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 PANTHER PTHR33751:SF1 25 79 7.9E-120 T 22-04-2016 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 PANTHER PTHR33751 122 326 7.9E-120 T 22-04-2016 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 PANTHER PTHR33751 25 79 7.9E-120 T 22-04-2016 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 PIRSF PIRSF000006 1 324 4.7E-107 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 PRINTS PR00605 Class IC cytochrome C signature 166 177 1.4E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 PRINTS PR00605 Class IC cytochrome C signature 295 317 1.4E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 39 83 1.2E-23 T 22-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 VCLMA_RS06780 19443e059e437b38cd2328caa15cf1db 326 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 113 323 3.1E-57 T 22-04-2016 IPR004678 Cytochrome c oxidase cbb3-type, subunit III UniPathway: UPA00705 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PANTHER PTHR10133:SF27 6 288 0.0 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PANTHER PTHR10133:SF27 321 933 0.0 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.8E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 SMART SM00482 691 898 6.4E-117 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Gene3D G3DSA:3.30.420.10 334 547 2.2E-85 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 SMART SM00279 173 208 7.2E-14 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 TIGRFAM TIGR00593 pola: DNA polymerase I 9 934 1.2E-285 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 ProSitePatterns PS00447 DNA polymerase family A signature. 759 778 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 818 829 2.4E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 735 748 2.4E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 683 698 2.4E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 881 894 2.4E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 660 682 2.4E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 807 2.4E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 850 866 2.4E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 728 2.4E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 784 2.4E-78 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Gene3D G3DSA:1.10.150.20 717 823 1.2E-35 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 SUPERFAMILY SSF56672 527 934 9.56E-160 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 SUPERFAMILY SSF88723 7 170 5.89E-57 T 22-04-2016 IPR029060 PIN domain-like VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Gene3D G3DSA:3.30.70.370 669 716 1.1E-65 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Gene3D G3DSA:3.30.70.370 824 934 1.1E-65 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 SMART SM00475 7 267 6.2E-127 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 SMART SM00474 335 522 6.8E-40 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PANTHER PTHR10133 6 288 0.0 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 PANTHER PTHR10133 321 933 0.0 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.1E-54 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Gene3D G3DSA:1.20.1060.10 548 668 5.2E-37 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Gene3D G3DSA:3.40.50.1010 8 186 4.9E-74 T 22-04-2016 IPR029060 PIN domain-like VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Pfam PF01612 3'-5' exonuclease 335 521 4.4E-39 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Pfam PF00476 DNA polymerase family A 557 931 2.5E-156 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 Gene3D G3DSA:1.10.150.20 187 253 1.9E-27 T 22-04-2016 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 SUPERFAMILY SSF47807 171 290 9.12E-32 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VCLMA_RS00545 a016b570571ebcb94526c9c1e6e15978 934 SUPERFAMILY SSF53098 338 523 9.11E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS03300 3afbd957e4938b3cf81e06e66f8f55f8 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.0E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS03300 3afbd957e4938b3cf81e06e66f8f55f8 296 SUPERFAMILY SSF53850 90 288 4.07E-22 T 22-04-2016 VCLMA_RS03300 3afbd957e4938b3cf81e06e66f8f55f8 296 Gene3D G3DSA:1.10.10.10 3 81 1.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS03300 3afbd957e4938b3cf81e06e66f8f55f8 296 PANTHER PTHR30293 2 295 3.0E-211 T 22-04-2016 VCLMA_RS03300 3afbd957e4938b3cf81e06e66f8f55f8 296 Gene3D G3DSA:3.40.190.10 121 227 8.4E-7 T 22-04-2016 VCLMA_RS03300 3afbd957e4938b3cf81e06e66f8f55f8 296 Pfam PF03466 LysR substrate binding domain 97 288 1.6E-10 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS03300 3afbd957e4938b3cf81e06e66f8f55f8 296 PANTHER PTHR30293:SF2 2 295 3.0E-211 T 22-04-2016 VCLMA_RS03300 3afbd957e4938b3cf81e06e66f8f55f8 296 SUPERFAMILY SSF46785 2 85 2.83E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 PIRSF PIRSF000382 1 761 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 314 4.8E-120 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 9.3E-151 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 Gene3D G3DSA:3.20.20.210 392 758 3.2E-129 T 22-04-2016 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 PANTHER PTHR30519:SF0 1 761 0.0 T 22-04-2016 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 SUPERFAMILY SSF51726 4 393 1.31E-107 T 22-04-2016 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 758 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 PANTHER PTHR30519 1 761 0.0 T 22-04-2016 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 758 35.985 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 SUPERFAMILY SSF51726 396 757 3.01E-114 T 22-04-2016 VCLMA_RS07940 31c42f77de4bf84f02a43836ab03b287 761 Gene3D G3DSA:3.20.20.210 3 388 1.4E-147 T 22-04-2016 VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 SUPERFAMILY SSF52540 4 169 8.2E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 Pfam PF01202 Shikimate kinase 13 169 3.5E-57 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.772 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 77 86 4.0E-29 T 22-04-2016 VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 7 22 4.0E-29 T 22-04-2016 VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 98 115 4.0E-29 T 22-04-2016 VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 59 67 4.0E-29 T 22-04-2016 VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 PRINTS PR01100 Shikimate kinase family signature 31 44 4.0E-29 T 22-04-2016 VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 Gene3D G3DSA:3.40.50.300 2 172 1.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12250 6f362c66fdc890e5507664224a9f1b23 174 PANTHER PTHR21087 1 174 5.0E-76 T 22-04-2016 VCLMA_RS08010 05cb025c42433a1bbc4ae25861469c7b 234 SMART SM00862 155 231 2.0E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS08010 05cb025c42433a1bbc4ae25861469c7b 234 Gene3D G3DSA:1.10.10.10 132 232 3.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08010 05cb025c42433a1bbc4ae25861469c7b 234 Pfam PF00072 Response regulator receiver domain 5 113 9.9E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS08010 05cb025c42433a1bbc4ae25861469c7b 234 PANTHER PTHR26402:SF596 3 234 3.4E-109 T 22-04-2016 VCLMA_RS08010 05cb025c42433a1bbc4ae25861469c7b 234 SUPERFAMILY SSF52172 3 181 2.41E-36 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS08010 05cb025c42433a1bbc4ae25861469c7b 234 Gene3D G3DSA:3.40.50.2300 2 126 3.4E-36 T 22-04-2016 VCLMA_RS08010 05cb025c42433a1bbc4ae25861469c7b 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 8.6E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS08010 05cb025c42433a1bbc4ae25861469c7b 234 PANTHER PTHR26402 3 234 3.4E-109 T 22-04-2016 VCLMA_RS08010 05cb025c42433a1bbc4ae25861469c7b 234 SMART SM00448 3 113 8.6E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS11525 0bd30b084f3742d13f6daf479d8fa2bc 177 Pfam PF01569 PAP2 superfamily 67 175 6.3E-21 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VCLMA_RS11525 0bd30b084f3742d13f6daf479d8fa2bc 177 SUPERFAMILY SSF48317 6 173 2.62E-38 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VCLMA_RS11525 0bd30b084f3742d13f6daf479d8fa2bc 177 SMART SM00014 64 170 1.1E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VCLMA_RS11525 0bd30b084f3742d13f6daf479d8fa2bc 177 PANTHER PTHR14969 1 177 1.6E-30 T 22-04-2016 VCLMA_RS11525 0bd30b084f3742d13f6daf479d8fa2bc 177 Gene3D G3DSA:1.20.144.10 5 174 1.4E-42 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VCLMA_RS09925 49d97e87359dcfd65e3d1818535abfa4 224 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 25 175 1.7E-35 T 22-04-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VCLMA_RS09925 49d97e87359dcfd65e3d1818535abfa4 224 PANTHER PTHR34385 1 69 6.5E-62 T 22-04-2016 VCLMA_RS09925 49d97e87359dcfd65e3d1818535abfa4 224 PANTHER PTHR34385 88 219 6.5E-62 T 22-04-2016 VCLMA_RS09925 49d97e87359dcfd65e3d1818535abfa4 224 PANTHER PTHR34385:SF1 1 69 6.5E-62 T 22-04-2016 VCLMA_RS09925 49d97e87359dcfd65e3d1818535abfa4 224 PANTHER PTHR34385:SF1 88 219 6.5E-62 T 22-04-2016 VCLMA_RS09925 49d97e87359dcfd65e3d1818535abfa4 224 SUPERFAMILY SSF55166 17 174 2.51E-20 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 393 2.2E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 Gene3D G3DSA:3.40.1190.10 82 311 1.0E-72 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 449 33.091 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 Gene3D G3DSA:3.90.190.20 314 451 2.1E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 1.2E-148 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 SUPERFAMILY SSF53623 100 311 2.49E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 SUPERFAMILY SSF63418 1 95 2.35E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 PANTHER PTHR23135 11 450 1.4E-158 T 22-04-2016 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 Gene3D G3DSA:3.40.1390.10 1 80 2.0E-23 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 Pfam PF08245 Mur ligase middle domain 105 293 7.6E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 Pfam PF01225 Mur ligase family, catalytic domain 24 79 1.1E-7 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 PANTHER PTHR23135:SF3 11 450 1.4E-158 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS11140 7492541ce7429353654159b6c7359c0c 453 SUPERFAMILY SSF53244 314 448 4.81E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11915 7e3f76fa785bfe54da6462b2481d83a1 288 Gene3D G3DSA:3.30.950.10 150 278 5.7E-49 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VCLMA_RS11915 7e3f76fa785bfe54da6462b2481d83a1 288 Gene3D G3DSA:3.40.1010.10 33 149 7.7E-46 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VCLMA_RS11915 7e3f76fa785bfe54da6462b2481d83a1 288 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 114 147 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VCLMA_RS11915 7e3f76fa785bfe54da6462b2481d83a1 288 SUPERFAMILY SSF53790 31 277 1.96E-79 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VCLMA_RS11915 7e3f76fa785bfe54da6462b2481d83a1 288 PANTHER PTHR21091:SF16 14 270 6.6E-80 T 22-04-2016 VCLMA_RS11915 7e3f76fa785bfe54da6462b2481d83a1 288 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 34 267 9.7E-93 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VCLMA_RS11915 7e3f76fa785bfe54da6462b2481d83a1 288 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 39 53 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VCLMA_RS11915 7e3f76fa785bfe54da6462b2481d83a1 288 PANTHER PTHR21091 14 270 6.6E-80 T 22-04-2016 VCLMA_RS11915 7e3f76fa785bfe54da6462b2481d83a1 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 36 245 1.4E-47 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 445 459 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Hamap MF_01687 Beta-galactosidase [lacZ]. 2 1019 16.769 T 22-04-2016 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Pfam PF02929 Beta galactosidase small chain 748 1016 8.6E-71 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 PANTHER PTHR10066:SF72 592 1017 0.0 T 22-04-2016 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 PANTHER PTHR10066:SF72 7 574 0.0 T 22-04-2016 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 SUPERFAMILY SSF49785 9 215 1.56E-64 T 22-04-2016 IPR008979 Galactose-binding domain-like VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 SMART SM01038 744 1017 6.5E-120 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Gene3D G3DSA:2.60.40.320 205 331 6.1E-32 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Gene3D G3DSA:2.70.98.10 732 1017 1.1E-98 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Pfam PF00703 Glycosyl hydrolases family 2 218 331 3.0E-14 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Gene3D G3DSA:3.20.20.80 332 621 1.2E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 PANTHER PTHR10066 592 1017 0.0 T 22-04-2016 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 PANTHER PTHR10066 7 574 0.0 T 22-04-2016 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 445 460 1.3E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 529 544 1.3E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 143 158 1.3E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 373 391 1.3E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 PRINTS PR00132 Glycosyl hydrolase family 2 signature 342 356 1.3E-37 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 SUPERFAMILY SSF49303 218 331 7.48E-22 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Gene3D G3DSA:2.60.40.320 623 723 4.6E-24 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 SUPERFAMILY SSF51445 332 622 5.56E-103 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Gene3D G3DSA:2.60.120.260 9 204 1.2E-81 T 22-04-2016 IPR008979 Galactose-binding domain-like VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 SUPERFAMILY SSF74650 731 1017 1.88E-96 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Pfam PF16353 Domain of unknown function(DUF4981) 634 719 2.0E-13 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 383 408 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 333 626 2.6E-112 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 215 3.4E-57 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 VCLMA_RS10830 9b497d65ec07a4bf6a6e1b1e67e4a393 1029 SUPERFAMILY SSF49303 619 721 2.06E-22 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 SUPERFAMILY SSF140990 403 601 1.23E-75 T 22-04-2016 VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 SUPERFAMILY SSF52540 145 392 5.12E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 Gene3D G3DSA:3.40.50.300 148 332 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 594 5.4E-243 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 5.6E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 Pfam PF01434 Peptidase family M41 383 592 4.6E-81 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 PANTHER PTHR23076 1 632 0.0 T 22-04-2016 VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 Pfam PF06480 FtsH Extracellular 5 94 1.0E-11 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 629 37.243 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 SMART SM00382 185 324 3.6E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03100 c002e5a22d888699e8dfd087f97019c2 648 Gene3D G3DSA:1.10.8.60 333 406 3.3E-27 T 22-04-2016 VCLMA_RS07425 b9532b30100b4fadcd2e16eeea626e98 353 PANTHER PTHR10799 56 332 5.7E-22 T 22-04-2016 VCLMA_RS07425 b9532b30100b4fadcd2e16eeea626e98 353 PANTHER PTHR10799:SF710 56 332 5.7E-22 T 22-04-2016 VCLMA_RS07425 b9532b30100b4fadcd2e16eeea626e98 353 SUPERFAMILY SSF55073 184 337 1.96E-40 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS07425 b9532b30100b4fadcd2e16eeea626e98 353 SMART SM00267 168 336 2.9E-54 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS07425 b9532b30100b4fadcd2e16eeea626e98 353 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 332 8.4E-37 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS07425 b9532b30100b4fadcd2e16eeea626e98 353 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 178 335 6.6E-41 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS07425 b9532b30100b4fadcd2e16eeea626e98 353 Gene3D G3DSA:3.30.70.270 181 338 1.2E-46 T 22-04-2016 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 Hamap MF_00821 Protein-export protein SecB [secB]. 1 146 32.261 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 146 2.2E-58 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 Gene3D G3DSA:3.10.420.10 5 152 3.1E-60 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 SUPERFAMILY SSF54611 4 142 5.67E-51 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 Pfam PF02556 Preprotein translocase subunit SecB 6 145 4.4E-55 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 PANTHER PTHR36918:SF1 4 153 1.9E-85 T 22-04-2016 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 PANTHER PTHR36918 4 153 1.9E-85 T 22-04-2016 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 124 142 4.2E-39 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 98 120 4.2E-39 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 74 94 4.2E-39 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VCLMA_RS12350 c11fe6565d8c0a65a4569a348644d5d7 154 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 14 31 4.2E-39 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 SMART SM00382 57 228 1.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 ProSitePatterns PS00321 recA signature. 213 221 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 SUPERFAMILY SSF54752 269 325 1.05E-21 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 PANTHER PTHR22942:SF1 3 335 1.1E-207 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 PANTHER PTHR22942 3 335 1.1E-207 T 22-04-2016 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 Gene3D G3DSA:3.40.50.300 26 267 4.2E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 Hamap MF_00268 Protein RecA [recA]. 5 329 50.81 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 297 314 4.7E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 93 122 4.7E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 243 272 4.7E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 210 238 4.7E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 165 194 4.7E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 PRINTS PR00142 RecA protein signature 127 156 4.7E-85 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 Pfam PF00154 recA bacterial DNA recombination protein 7 267 3.8E-143 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 SUPERFAMILY SSF52540 4 266 4.92E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 Gene3D G3DSA:3.30.250.10 268 326 2.8E-29 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal VCLMA_RS02615 151a67955455c6e88c27927be88d74e2 354 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 8.0E-171 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VCLMA_RS06220 25760dab211199a063c1e24240ad13a9 306 Pfam PF04393 Protein of unknown function (DUF535) 25 294 9.6E-81 T 22-04-2016 IPR007488 Protein of unknown function DUF535 VCLMA_RS06220 25760dab211199a063c1e24240ad13a9 306 PANTHER PTHR38785 1 299 3.6E-123 T 22-04-2016 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 Gene3D G3DSA:3.40.50.300 4 168 1.6E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 Pfam PF02421 Ferrous iron transport protein B 4 161 5.5E-57 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 PANTHER PTHR11649:SF37 659 726 2.7E-259 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 PANTHER PTHR11649:SF37 260 608 2.7E-259 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 PANTHER PTHR11649:SF37 4 149 2.7E-259 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 688 1.7E-177 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 SUPERFAMILY SSF52540 4 173 6.55E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 PANTHER PTHR11649 659 726 2.7E-259 T 22-04-2016 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 PANTHER PTHR11649 260 608 2.7E-259 T 22-04-2016 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 PANTHER PTHR11649 4 149 2.7E-259 T 22-04-2016 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 Pfam PF07670 Nucleoside recognition 509 691 1.8E-36 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 Pfam PF07670 Nucleoside recognition 349 440 1.6E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 1.5E-18 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 3.2E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 3.2E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS09575 a3290ee11b87967e7699adae4749fe5f 758 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.2E-5 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS01265 656bcd3f12e8d2ae98fae7bcbf69e5dd 184 Pfam PF02397 Bacterial sugar transferase 4 173 8.1E-48 T 22-04-2016 IPR003362 Bacterial sugar transferase VCLMA_RS01265 656bcd3f12e8d2ae98fae7bcbf69e5dd 184 PANTHER PTHR30576 1 181 1.6E-87 T 22-04-2016 VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 PANTHER PTHR24423:SF496 181 437 5.0E-54 T 22-04-2016 VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 SUPERFAMILY SSF55874 311 444 2.23E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 SUPERFAMILY SSF47384 222 288 1.06E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 Gene3D G3DSA:3.30.565.10 309 445 3.0E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 446 2.6E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 SMART SM00387 341 448 2.6E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 Gene3D G3DSA:1.10.287.130 234 286 7.9E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 3.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 3.9E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07620 bc662ce5755cc8c286c2eae9b55a1701 457 PANTHER PTHR24423 181 437 5.0E-54 T 22-04-2016 VCLMA_RS06850 406976ab04498ef6bbad236688ccfb18 290 Pfam PF13276 HTH-like domain 42 95 6.3E-8 T 22-04-2016 IPR025948 HTH-like domain VCLMA_RS06850 406976ab04498ef6bbad236688ccfb18 290 PANTHER PTHR32552 1 283 2.8E-85 T 22-04-2016 VCLMA_RS06850 406976ab04498ef6bbad236688ccfb18 290 Gene3D G3DSA:3.30.420.10 114 272 2.3E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS06850 406976ab04498ef6bbad236688ccfb18 290 Pfam PF00665 Integrase core domain 119 234 3.6E-33 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VCLMA_RS06850 406976ab04498ef6bbad236688ccfb18 290 SUPERFAMILY SSF53098 112 274 5.31E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS01240 406976ab04498ef6bbad236688ccfb18 290 Pfam PF13276 HTH-like domain 42 95 6.3E-8 T 22-04-2016 IPR025948 HTH-like domain VCLMA_RS01240 406976ab04498ef6bbad236688ccfb18 290 PANTHER PTHR32552 1 283 2.8E-85 T 22-04-2016 VCLMA_RS01240 406976ab04498ef6bbad236688ccfb18 290 Gene3D G3DSA:3.30.420.10 114 272 2.3E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS01240 406976ab04498ef6bbad236688ccfb18 290 Pfam PF00665 Integrase core domain 119 234 3.6E-33 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VCLMA_RS01240 406976ab04498ef6bbad236688ccfb18 290 SUPERFAMILY SSF53098 112 274 5.31E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS02830 45d450c8b3b2ce185d2486f88d86e7b7 196 Pfam PF13580 SIS domain 9 144 1.3E-34 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS02830 45d450c8b3b2ce185d2486f88d86e7b7 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 33.769 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VCLMA_RS02830 45d450c8b3b2ce185d2486f88d86e7b7 196 PANTHER PTHR30390 1 196 5.4E-117 T 22-04-2016 VCLMA_RS02830 45d450c8b3b2ce185d2486f88d86e7b7 196 SUPERFAMILY SSF53697 1 191 2.83E-56 T 22-04-2016 VCLMA_RS02830 45d450c8b3b2ce185d2486f88d86e7b7 196 Gene3D G3DSA:3.40.50.10490 2 191 5.5E-58 T 22-04-2016 VCLMA_RS02830 45d450c8b3b2ce185d2486f88d86e7b7 196 PANTHER PTHR30390:SF5 1 196 5.4E-117 T 22-04-2016 VCLMA_RS02520 30a75b7e21c470b6a088386773a5c925 208 PANTHER PTHR30309:SF0 1 206 3.4E-101 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VCLMA_RS02520 30a75b7e21c470b6a088386773a5c925 208 PANTHER PTHR30309 1 206 3.4E-101 T 22-04-2016 VCLMA_RS02520 30a75b7e21c470b6a088386773a5c925 208 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 1.1E-74 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VCLMA_RS02520 30a75b7e21c470b6a088386773a5c925 208 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 19.211 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VCLMA_RS02520 30a75b7e21c470b6a088386773a5c925 208 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.4E-51 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VCLMA_RS02520 30a75b7e21c470b6a088386773a5c925 208 SMART SM01207 10 185 4.7E-86 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 SUPERFAMILY SSF54631 54 190 5.61E-34 T 22-04-2016 VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 SMART SM01091 203 281 1.3E-29 T 22-04-2016 IPR005170 Transporter-associated domain VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 PANTHER PTHR22777 23 281 6.9E-117 T 22-04-2016 VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 Pfam PF03471 Transporter associated domain 204 279 7.8E-22 T 22-04-2016 IPR005170 Transporter-associated domain VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 SUPERFAMILY SSF56176 198 280 7.09E-22 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 Pfam PF00571 CBS domain 67 124 1.8E-8 T 22-04-2016 IPR000644 CBS domain VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 Pfam PF00571 CBS domain 138 187 1.4E-6 T 22-04-2016 IPR000644 CBS domain VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 Gene3D G3DSA:3.10.580.10 53 195 4.3E-25 T 22-04-2016 VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 Gene3D G3DSA:3.30.465.10 196 280 3.0E-29 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 PANTHER PTHR22777:SF17 23 281 6.9E-117 T 22-04-2016 VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 SMART SM00116 76 125 0.0037 T 22-04-2016 IPR000644 CBS domain VCLMA_RS04480 f9bd09c2691fdab99c3ff78645e11f78 291 SMART SM00116 139 187 0.028 T 22-04-2016 IPR000644 CBS domain VCLMA_RS06065 e9ea65c87c1142a87d4c8ff71c07577c 252 Pfam PF04794 YdjC-like protein 2 229 6.9E-52 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like VCLMA_RS06065 e9ea65c87c1142a87d4c8ff71c07577c 252 PANTHER PTHR31609 1 252 6.5E-76 T 22-04-2016 VCLMA_RS06065 e9ea65c87c1142a87d4c8ff71c07577c 252 Gene3D G3DSA:3.20.20.370 1 243 1.4E-74 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VCLMA_RS06065 e9ea65c87c1142a87d4c8ff71c07577c 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 240 39.552 T 22-04-2016 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 VCLMA_RS06065 e9ea65c87c1142a87d4c8ff71c07577c 252 SUPERFAMILY SSF88713 1 243 1.09E-68 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.29E-10 T 22-04-2016 VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.29E-10 T 22-04-2016 VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.29E-10 T 22-04-2016 VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 Gene3D G3DSA:3.40.30.10 2 107 1.2E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 Pfam PF00085 Thioredoxin 5 106 1.3E-32 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 PANTHER PTHR10438 3 108 5.9E-35 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 SUPERFAMILY SSF52833 3 107 3.93E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.4E-37 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 PIRSF PIRSF000077 2 108 1.3E-42 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VCLMA_RS01465 614816fbd4420c03f53a5993dc78116f 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VCLMA_RS03790 28ce125e06309a03b8922ad6dbeeda31 234 Gene3D G3DSA:3.90.470.20 50 116 7.5E-4 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS03790 28ce125e06309a03b8922ad6dbeeda31 234 Gene3D G3DSA:3.90.470.20 117 193 3.6E-7 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS03790 28ce125e06309a03b8922ad6dbeeda31 234 PANTHER PTHR38096 1 229 1.3E-71 T 22-04-2016 VCLMA_RS03790 28ce125e06309a03b8922ad6dbeeda31 234 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 112 199 3.4E-12 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS03790 28ce125e06309a03b8922ad6dbeeda31 234 SUPERFAMILY SSF56214 110 194 1.27E-14 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS03790 28ce125e06309a03b8922ad6dbeeda31 234 PRINTS PR01399 Enterobactin synthetase component D signature 154 170 1.5E-9 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 VCLMA_RS03790 28ce125e06309a03b8922ad6dbeeda31 234 PRINTS PR01399 Enterobactin synthetase component D signature 48 68 1.5E-9 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 VCLMA_RS01235 4f8a8820f6b81ca2aa4f39b5a15ae7a9 102 SUPERFAMILY SSF46689 5 96 4.48E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS01235 4f8a8820f6b81ca2aa4f39b5a15ae7a9 102 PANTHER PTHR33215:SF4 2 102 1.7E-67 T 22-04-2016 VCLMA_RS01235 4f8a8820f6b81ca2aa4f39b5a15ae7a9 102 PANTHER PTHR33215 2 102 1.7E-67 T 22-04-2016 VCLMA_RS01235 4f8a8820f6b81ca2aa4f39b5a15ae7a9 102 Pfam PF01527 Transposase 4 78 4.4E-15 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VCLMA_RS01235 4f8a8820f6b81ca2aa4f39b5a15ae7a9 102 Gene3D G3DSA:1.10.10.60 10 93 1.3E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 PANTHER PTHR11946:SF86 3 638 9.6E-264 T 22-04-2016 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 SUPERFAMILY SSF50249 578 682 1.49E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.369 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 PANTHER PTHR11946 3 638 9.6E-264 T 22-04-2016 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 6.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 6.6E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 SUPERFAMILY SSF47323 389 546 4.67E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 Pfam PF01588 Putative tRNA binding domain 588 680 9.1E-25 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 Gene3D G3DSA:1.10.730.10 380 534 7.2E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 Gene3D G3DSA:3.40.50.620 183 379 2.4E-89 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 Gene3D G3DSA:3.40.50.620 6 144 2.4E-89 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 682 3.2E-47 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 Gene3D G3DSA:2.40.50.140 576 682 9.6E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 SUPERFAMILY SSF57770 142 176 5.89E-13 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 Pfam PF09334 tRNA synthetases class I (M) 9 396 4.1E-164 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 4.5E-200 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 SUPERFAMILY SSF52374 176 387 1.02E-100 T 22-04-2016 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 SUPERFAMILY SSF52374 4 141 1.02E-100 T 22-04-2016 VCLMA_RS04855 edc2bf637da64db6660c976246321368 683 Gene3D G3DSA:2.20.28.20 145 176 5.5E-20 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 377 513 1.3E-33 T 22-04-2016 IPR001453 MoaB/Mog domain VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 PIRSF PIRSF036618 2 606 0.0 T 22-04-2016 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Gene3D G3DSA:3.40.50.300 14 176 3.2E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Gene3D G3DSA:2.40.340.10 531 600 9.6E-29 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 PANTHER PTHR10192 164 602 4.6E-177 T 22-04-2016 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Gene3D G3DSA:2.170.190.11 250 341 1.6E-28 T 22-04-2016 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Pfam PF00994 Probable molybdopterin binding domain 380 517 9.6E-28 T 22-04-2016 IPR001453 MoaB/Mog domain VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Gene3D G3DSA:3.40.980.10 363 530 1.0E-65 T 22-04-2016 IPR001453 MoaB/Mog domain VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 17 172 3.1E-42 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Pfam PF03454 MoeA C-terminal region (domain IV) 531 602 3.7E-20 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Gene3D G3DSA:3.90.105.10 342 362 2.8E-17 T 22-04-2016 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Gene3D G3DSA:3.90.105.10 226 249 2.8E-17 T 22-04-2016 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 SMART SM00852 380 517 1.3E-42 T 22-04-2016 IPR001453 MoaB/Mog domain VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Pfam PF03453 MoeA N-terminal region (domain I and II) 208 367 1.7E-34 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 SUPERFAMILY SSF53218 377 522 3.4E-45 T 22-04-2016 IPR001453 MoaB/Mog domain VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 SUPERFAMILY SSF63882 205 375 6.93E-50 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 453 486 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 17 149 3.5E-47 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 SUPERFAMILY SSF63867 526 604 3.92E-22 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS07085 f24d4bad40c162ca50c1e5859807b90a 606 SUPERFAMILY SSF52540 15 175 4.86E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 SUPERFAMILY SSF55729 311 433 2.92E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 Gene3D G3DSA:3.40.1160.10 34 305 1.0E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 Gene3D G3DSA:3.40.630.30 309 453 2.5E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 456 217.347 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 Pfam PF00696 Amino acid kinase family 36 277 7.5E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 SUPERFAMILY SSF53633 15 305 5.03E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 19 456 8.4E-228 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 PANTHER PTHR30602 12 456 0.0 T 22-04-2016 VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 PIRSF PIRSF000423 9 456 3.3E-204 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 VCLMA_RS10745 1741ac6d72f6d195ff6d9c32207d9219 456 PANTHER PTHR30602:SF3 12 456 0.0 T 22-04-2016 VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 4.1E-38 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 74 192 3.0E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 PANTHER PTHR18901 3 222 6.8E-72 T 22-04-2016 VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 35.855 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 Gene3D G3DSA:1.10.150.240 21 83 2.1E-23 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 PANTHER PTHR18901:SF14 3 222 6.8E-72 T 22-04-2016 VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 220 2.6E-59 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 187 2.7E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 SUPERFAMILY SSF56784 3 222 9.57E-60 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 Gene3D G3DSA:3.40.50.1000 2 20 1.7E-43 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 Gene3D G3DSA:3.40.50.1000 84 222 1.7E-43 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS12225 4d48e3934365debe14ce8f76a59234c2 226 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 88 190 7.7E-13 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 Gene3D G3DSA:3.30.390.30 350 463 3.3E-26 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 SUPERFAMILY SSF51905 219 367 1.56E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 SUPERFAMILY SSF51905 114 191 1.56E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 SUPERFAMILY SSF51905 1 56 1.56E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 SUPERFAMILY SSF55424 349 467 1.44E-25 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PANTHER PTHR22912:SF176 1 463 0.0 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 4.0E-40 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 4.0E-40 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 4.0E-40 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.0E-40 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 4.0E-40 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.0E-40 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 427 4.0E-40 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 4.0E-40 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 434 454 4.0E-40 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 Gene3D G3DSA:3.50.50.60 149 269 6.1E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 5.2E-20 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 5.2E-20 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 5.2E-20 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 5.2E-20 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 5.2E-20 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 3.9E-17 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 327 6.1E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 Gene3D G3DSA:3.50.50.60 4 146 6.4E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 Gene3D G3DSA:3.50.50.60 270 334 6.4E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PANTHER PTHR22912 1 463 0.0 T 22-04-2016 VCLMA_RS12295 92dae14b0726b4436624ba9adeec971e 484 PIRSF PIRSF000350 1 467 1.7E-61 T 22-04-2016 VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 PANTHER PTHR33525 3 368 7.9E-148 T 22-04-2016 VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 PANTHER PTHR33525:SF4 3 368 7.9E-148 T 22-04-2016 VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 SUPERFAMILY SSF109604 181 399 2.2E-41 T 22-04-2016 VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 PIRSF PIRSF003180 1 403 2.0E-168 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 Pfam PF08668 HDOD domain 205 319 2.2E-14 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 Pfam PF00563 EAL domain 75 190 2.1E-14 T 22-04-2016 IPR001633 EAL domain VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 SMART SM00052 2 195 0.0011 T 22-04-2016 IPR001633 EAL domain VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 Gene3D G3DSA:1.10.3150.10 182 354 7.8E-33 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 Gene3D G3DSA:3.20.20.450 81 181 5.6E-13 T 22-04-2016 IPR001633 EAL domain VCLMA_RS08490 5f0b728bf721ca201d07f07ff5ce8f6a 404 SUPERFAMILY SSF141868 5 192 4.32E-29 T 22-04-2016 IPR001633 EAL domain VCLMA_RS12995 afa2d076abb1fc3d8317fba4b7112b01 210 PANTHER PTHR31760:SF0 4 206 2.8E-83 T 22-04-2016 VCLMA_RS12995 afa2d076abb1fc3d8317fba4b7112b01 210 PANTHER PTHR31760 4 206 2.8E-83 T 22-04-2016 VCLMA_RS12995 afa2d076abb1fc3d8317fba4b7112b01 210 PIRSF PIRSF003078 4 209 1.0E-59 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VCLMA_RS12995 afa2d076abb1fc3d8317fba4b7112b01 210 Gene3D G3DSA:3.40.50.150 8 208 1.5E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS12995 afa2d076abb1fc3d8317fba4b7112b01 210 SUPERFAMILY SSF53335 10 208 2.01E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS12995 afa2d076abb1fc3d8317fba4b7112b01 210 Pfam PF02527 rRNA small subunit methyltransferase G 23 204 7.1E-62 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VCLMA_RS12995 afa2d076abb1fc3d8317fba4b7112b01 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 3.1E-57 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VCLMA_RS12995 afa2d076abb1fc3d8317fba4b7112b01 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.177 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 39 285 5.7E-88 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 Gene3D G3DSA:1.20.1640.10 124 293 5.0E-28 T 22-04-2016 VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 SUPERFAMILY SSF82866 74 293 3.53E-41 T 22-04-2016 VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 PANTHER PTHR30081 3 314 1.8E-97 T 22-04-2016 VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 29.887 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 118 282 3.0E-57 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 Pfam PF02355 Protein export membrane protein 111 292 2.4E-71 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 Pfam PF07549 SecD/SecF GG Motif 35 60 8.5E-11 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 3.5E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 3.5E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 3.5E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCLMA_RS03610 937f03a57ef609d48176cd1ca58d5d91 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 3.5E-32 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 PANTHER PTHR18934 38 713 0.0 T 22-04-2016 VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 Pfam PF11898 Domain of unknown function (DUF3418) 723 1307 5.7E-232 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 24 1307 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 583 709 2.5E-18 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 PANTHER PTHR18934:SF109 38 713 0.0 T 22-04-2016 VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 Pfam PF04408 Helicase associated domain (HA2) 477 569 1.3E-18 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 PANTHER PTHR18934:SF109 750 878 0.0 T 22-04-2016 VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 SMART SM00490 315 415 3.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 SMART SM00487 82 269 1.1E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 Pfam PF00270 DEAD/DEAH box helicase 98 243 3.2E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 SUPERFAMILY SSF52540 82 616 1.51E-114 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 PANTHER PTHR18934 750 878 0.0 T 22-04-2016 VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 SMART SM00847 475 570 1.7E-38 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 SMART SM00382 102 395 5.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 Pfam PF00271 Helicase conserved C-terminal domain 302 414 2.6E-10 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 Gene3D G3DSA:3.40.50.300 286 427 1.0E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06530 e45cf2ef647413e17dc7ae1f080942d9 1309 Gene3D G3DSA:3.40.50.300 87 243 1.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 SUPERFAMILY SSF48179 191 343 5.02E-56 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 Gene3D G3DSA:1.10.1040.10 196 338 1.4E-58 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 8.4E-43 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 8.4E-43 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 8.4E-43 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 8.4E-43 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 8.4E-43 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 8.4E-43 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 Gene3D G3DSA:3.40.50.720 5 195 1.1E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 PIRSF PIRSF000114 10 344 3.4E-97 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 PANTHER PTHR11728 8 344 2.2E-141 T 22-04-2016 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 37.299 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 SUPERFAMILY SSF51735 15 190 2.18E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 329 4.8E-52 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS12345 79e1aab1f0bf825f2b2246edc370379b 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 1.5E-47 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 VCLMA_RS11690 049838404fec76e2c849e9ecae910245 242 Gene3D G3DSA:3.40.1130.10 30 235 3.2E-19 T 22-04-2016 VCLMA_RS11690 049838404fec76e2c849e9ecae910245 242 PANTHER PTHR10434:SF20 1 239 1.3E-167 T 22-04-2016 VCLMA_RS11690 049838404fec76e2c849e9ecae910245 242 SUPERFAMILY SSF69593 7 237 3.79E-59 T 22-04-2016 VCLMA_RS11690 049838404fec76e2c849e9ecae910245 242 PANTHER PTHR10434 1 239 1.3E-167 T 22-04-2016 VCLMA_RS11690 049838404fec76e2c849e9ecae910245 242 SMART SM00563 67 182 1.9E-40 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS11690 049838404fec76e2c849e9ecae910245 242 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.5E-44 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 VCLMA_RS11690 049838404fec76e2c849e9ecae910245 242 Pfam PF01553 Acyltransferase 60 180 4.0E-31 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS02600 fb3f602cb87078d40c358e302733ba51 287 PANTHER PTHR30406:SF1 11 280 1.0E-156 T 22-04-2016 VCLMA_RS02600 fb3f602cb87078d40c358e302733ba51 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 275 1.6E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02600 fb3f602cb87078d40c358e302733ba51 287 PANTHER PTHR30406 11 280 1.0E-156 T 22-04-2016 VCLMA_RS02600 fb3f602cb87078d40c358e302733ba51 287 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 15 274 4.7E-130 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 VCLMA_RS02600 fb3f602cb87078d40c358e302733ba51 287 SUPERFAMILY SSF161098 13 265 2.88E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02600 fb3f602cb87078d40c358e302733ba51 287 Gene3D G3DSA:1.10.3720.10 16 274 5.1E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02600 fb3f602cb87078d40c358e302733ba51 287 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 272 2.7E-100 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 SMART SM00342 1027 1109 7.8E-29 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 Gene3D G3DSA:2.120.10.30 361 442 9.4E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 Gene3D G3DSA:2.120.10.30 484 556 9.4E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 Gene3D G3DSA:2.120.10.30 255 324 9.4E-8 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 Gene3D G3DSA:1.10.10.60 1009 1063 1.9E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 Pfam PF12833 Helix-turn-helix domain 1034 1109 2.8E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 SUPERFAMILY SSF63829 416 445 1.44E-11 T 22-04-2016 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 SUPERFAMILY SSF63829 255 375 1.44E-11 T 22-04-2016 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 SUPERFAMILY SSF63829 481 559 1.44E-11 T 22-04-2016 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 SUPERFAMILY SSF46689 1063 1110 3.58E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 Gene3D G3DSA:1.10.10.60 1064 1108 4.5E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 PANTHER PTHR11019 1003 1114 5.6E-30 T 22-04-2016 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1064 1105 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1078 1093 7.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1093 1109 7.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 PANTHER PTHR11019:SF112 1003 1114 5.6E-30 T 22-04-2016 VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 SUPERFAMILY SSF50998 50 158 1.73E-5 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VCLMA_RS09585 373d0d598165231c68bcfe352f3e4ab7 1114 SUPERFAMILY SSF50998 200 354 1.73E-5 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VCLMA_RS02185 e5b5c7ef4e9a244f2f95c6604330a986 323 PANTHER PTHR12001:SF47 8 323 6.0E-130 T 22-04-2016 VCLMA_RS02185 e5b5c7ef4e9a244f2f95c6604330a986 323 SUPERFAMILY SSF48576 4 322 5.92E-101 T 22-04-2016 IPR008949 Isoprenoid synthase domain VCLMA_RS02185 e5b5c7ef4e9a244f2f95c6604330a986 323 PANTHER PTHR12001 8 323 6.0E-130 T 22-04-2016 IPR017446 Polyprenyl synthetase-related VCLMA_RS02185 e5b5c7ef4e9a244f2f95c6604330a986 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VCLMA_RS02185 e5b5c7ef4e9a244f2f95c6604330a986 323 Gene3D G3DSA:1.10.600.10 3 323 4.6E-101 T 22-04-2016 IPR008949 Isoprenoid synthase domain VCLMA_RS02185 e5b5c7ef4e9a244f2f95c6604330a986 323 Pfam PF00348 Polyprenyl synthetase 32 273 1.5E-73 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VCLMA_RS02185 e5b5c7ef4e9a244f2f95c6604330a986 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 SMART SM00304 228 282 1.7E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 PANTHER PTHR32089 68 559 2.3E-238 T 22-04-2016 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 SMART SM01049 46 135 1.2E-32 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 SMART SM00283 290 558 6.1E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 4.3E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 325 354 4.3E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 SUPERFAMILY SSF58104 250 559 5.23E-73 T 22-04-2016 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 Pfam PF17200 Single Cache domain 2 49 194 1.6E-39 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 Gene3D G3DSA:3.30.450.20 40 187 1.1E-47 T 22-04-2016 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 PANTHER PTHR32089:SF55 68 559 2.3E-238 T 22-04-2016 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 Pfam PF00672 HAMP domain 209 278 9.6E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 Gene3D G3DSA:1.10.287.950 316 529 2.8E-55 T 22-04-2016 VCLMA_RS01040 96f13fb24231a63796a1ea5900c21d0b 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 358 557 3.0E-44 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS07995 d56c4124b216b2b9f76618d82958c563 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 53.51 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VCLMA_RS07995 d56c4124b216b2b9f76618d82958c563 445 SUPERFAMILY SSF140570 124 286 6.93E-79 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VCLMA_RS07995 d56c4124b216b2b9f76618d82958c563 445 SUPERFAMILY SSF46785 13 123 6.8E-46 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07995 d56c4124b216b2b9f76618d82958c563 445 Gene3D G3DSA:1.10.10.10 29 123 3.2E-46 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07995 d56c4124b216b2b9f76618d82958c563 445 Pfam PF03882 MukF winged-helix domain 10 122 1.3E-55 T 22-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain VCLMA_RS07995 d56c4124b216b2b9f76618d82958c563 445 PIRSF PIRSF018282 1 445 1.0E-242 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VCLMA_RS07995 d56c4124b216b2b9f76618d82958c563 445 Pfam PF17192 MukF middle domain 126 286 2.7E-80 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain VCLMA_RS07995 d56c4124b216b2b9f76618d82958c563 445 Pfam PF17193 MukF C-terminal domain 288 445 5.5E-78 T 22-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 Gene3D G3DSA:1.25.20.10 33 393 3.7E-107 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 SUPERFAMILY SSF53955 485 642 1.99E-48 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 Gene3D G3DSA:1.10.530.10 481 640 8.9E-50 T 22-04-2016 VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 SUPERFAMILY SSF48435 33 481 1.44E-125 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 PANTHER PTHR21666:SF190 467 632 2.0E-110 T 22-04-2016 VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 Gene3D G3DSA:1.10.1240.20 408 475 2.9E-26 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 Pfam PF01464 Transglycosylase SLT domain 492 599 1.8E-30 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 Pfam PF14718 Soluble lytic murein transglycosylase L domain 411 475 7.5E-22 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 505 533 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VCLMA_RS03400 999bcc0b2484352a92283af4cc02227f 648 PANTHER PTHR21666 467 632 2.0E-110 T 22-04-2016 VCLMA_RS03545 c4c0c05ffbe862e87ea67bda72ef2485 236 PIRSF PIRSF003107 4 223 4.2E-70 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VCLMA_RS03545 c4c0c05ffbe862e87ea67bda72ef2485 236 PANTHER PTHR10010:SF14 1 225 2.2E-92 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VCLMA_RS03545 c4c0c05ffbe862e87ea67bda72ef2485 236 Gene3D G3DSA:1.20.58.220 6 111 5.5E-38 T 22-04-2016 VCLMA_RS03545 c4c0c05ffbe862e87ea67bda72ef2485 236 SUPERFAMILY SSF109755 10 225 1.15E-70 T 22-04-2016 VCLMA_RS03545 c4c0c05ffbe862e87ea67bda72ef2485 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 1.3E-78 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VCLMA_RS03545 c4c0c05ffbe862e87ea67bda72ef2485 236 PANTHER PTHR10010 1 225 2.2E-92 T 22-04-2016 VCLMA_RS03545 c4c0c05ffbe862e87ea67bda72ef2485 236 Gene3D G3DSA:1.20.58.220 124 225 6.2E-30 T 22-04-2016 VCLMA_RS03545 c4c0c05ffbe862e87ea67bda72ef2485 236 Pfam PF01895 PhoU domain 128 210 1.9E-16 T 22-04-2016 IPR026022 PhoU domain VCLMA_RS03545 c4c0c05ffbe862e87ea67bda72ef2485 236 Pfam PF01895 PhoU domain 23 109 9.5E-23 T 22-04-2016 IPR026022 PhoU domain VCLMA_RS14535 0d0f58f31abaf8f91f7722c7948f0f2a 104 SUPERFAMILY SSF52540 1 96 7.28E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS14535 0d0f58f31abaf8f91f7722c7948f0f2a 104 PANTHER PTHR23115 1 92 3.4E-64 T 22-04-2016 VCLMA_RS14535 0d0f58f31abaf8f91f7722c7948f0f2a 104 Gene3D G3DSA:3.40.50.300 1 94 7.7E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS14535 0d0f58f31abaf8f91f7722c7948f0f2a 104 PANTHER PTHR23115:SF151 1 92 3.4E-64 T 22-04-2016 VCLMA_RS14535 0d0f58f31abaf8f91f7722c7948f0f2a 104 PRINTS PR00315 GTP-binding elongation factor signature 8 19 1.7E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS14535 0d0f58f31abaf8f91f7722c7948f0f2a 104 PRINTS PR00315 GTP-binding elongation factor signature 45 54 1.7E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS14535 0d0f58f31abaf8f91f7722c7948f0f2a 104 Pfam PF00009 Elongation factor Tu GTP binding domain 1 94 3.2E-25 T 22-04-2016 VCLMA_RS11800 069588ef0725e6ab8db65d97c09a8f72 189 Pfam PF04751 Protein of unknown function (DUF615) 18 168 1.6E-55 T 22-04-2016 IPR006839 Ribosome-associated, YjgA VCLMA_RS11800 069588ef0725e6ab8db65d97c09a8f72 189 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 8 172 23.503 T 22-04-2016 IPR006839 Ribosome-associated, YjgA VCLMA_RS11800 069588ef0725e6ab8db65d97c09a8f72 189 PANTHER PTHR38101 1 189 2.9E-87 T 22-04-2016 VCLMA_RS11800 069588ef0725e6ab8db65d97c09a8f72 189 Gene3D G3DSA:1.10.60.30 28 102 1.4E-34 T 22-04-2016 IPR023153 PSPTO4464-like domain VCLMA_RS11800 069588ef0725e6ab8db65d97c09a8f72 189 PIRSF PIRSF016183 1 176 9.2E-72 T 22-04-2016 IPR006839 Ribosome-associated, YjgA VCLMA_RS11800 069588ef0725e6ab8db65d97c09a8f72 189 PANTHER PTHR38101:SF1 1 189 2.9E-87 T 22-04-2016 VCLMA_RS11800 069588ef0725e6ab8db65d97c09a8f72 189 SUPERFAMILY SSF158710 28 171 9.02E-52 T 22-04-2016 VCLMA_RS11800 069588ef0725e6ab8db65d97c09a8f72 189 Gene3D G3DSA:1.10.60.30 104 175 8.1E-29 T 22-04-2016 IPR023153 PSPTO4464-like domain VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 SMART SM00052 131 372 1.5E-69 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 Gene3D G3DSA:3.20.20.450 138 379 2.6E-74 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 Pfam PF00072 Response regulator receiver domain 1 114 1.9E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 ProSitePatterns PS00622 LuxR-type HTH domain signature. 538 565 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 PANTHER PTHR26402 1 133 4.5E-65 T 22-04-2016 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 PANTHER PTHR26402 500 576 4.5E-65 T 22-04-2016 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 SMART SM00448 1 115 8.4E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 SUPERFAMILY SSF46894 510 578 7.48E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 Pfam PF00563 EAL domain 138 367 9.5E-67 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 SUPERFAMILY SSF141868 137 380 7.72E-75 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 PANTHER PTHR26402:SF547 1 133 4.5E-65 T 22-04-2016 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 PANTHER PTHR26402:SF547 500 576 4.5E-65 T 22-04-2016 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 SMART SM00421 521 578 4.6E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 538 554 2.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 554 566 2.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 524 538 2.1E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 Gene3D G3DSA:1.10.10.10 521 578 1.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 Gene3D G3DSA:3.40.50.2300 1 123 2.5E-22 T 22-04-2016 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 SUPERFAMILY SSF52172 1 125 1.24E-21 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 Gene3D G3DSA:3.40.50.2300 394 520 5.8E-5 T 22-04-2016 VCLMA_RS07685 9b03980477169c9e8c319131813283bc 581 Pfam PF00196 Bacterial regulatory proteins, luxR family 523 577 1.1E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS09315 4cf50f3009f1b510ab361c71f281eb03 56 Pfam PF01783 Ribosomal L32p protein family 2 56 5.1E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VCLMA_RS09315 4cf50f3009f1b510ab361c71f281eb03 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 6.5E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VCLMA_RS09315 4cf50f3009f1b510ab361c71f281eb03 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.068 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 VCLMA_RS09315 4cf50f3009f1b510ab361c71f281eb03 56 PANTHER PTHR35534 1 56 9.3E-29 T 22-04-2016 VCLMA_RS09315 4cf50f3009f1b510ab361c71f281eb03 56 SUPERFAMILY SSF57829 2 55 3.97E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 Pfam PF08345 Flagellar M-ring protein C-terminal 282 452 4.1E-41 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 53 579 2.6E-77 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 PANTHER PTHR30046:SF0 31 579 3.1E-200 T 22-04-2016 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 PRINTS PR01009 Flagellar M-ring protein signature 150 168 1.9E-24 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 PRINTS PR01009 Flagellar M-ring protein signature 182 196 1.9E-24 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 PRINTS PR01009 Flagellar M-ring protein signature 375 399 1.9E-24 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 PRINTS PR01009 Flagellar M-ring protein signature 225 243 1.9E-24 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 PRINTS PR01009 Flagellar M-ring protein signature 295 313 1.9E-24 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 PANTHER PTHR30046 31 579 3.1E-200 T 22-04-2016 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 PIRSF PIRSF004862 30 580 3.7E-160 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VCLMA_RS09835 255a8c3f578eb96c71e82fb2f330cc4a 580 Pfam PF01514 Secretory protein of YscJ/FliF family 63 249 1.3E-55 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF VCLMA_RS05915 fac16fef175e5566c07a9e8c32307ad5 377 PANTHER PTHR23409 197 377 3.2E-278 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VCLMA_RS05915 fac16fef175e5566c07a9e8c32307ad5 377 PANTHER PTHR23409 1 173 3.2E-278 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VCLMA_RS05915 fac16fef175e5566c07a9e8c32307ad5 377 PANTHER PTHR23409:SF23 197 377 3.2E-278 T 22-04-2016 VCLMA_RS05915 fac16fef175e5566c07a9e8c32307ad5 377 PANTHER PTHR23409:SF23 1 173 3.2E-278 T 22-04-2016 VCLMA_RS05915 fac16fef175e5566c07a9e8c32307ad5 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VCLMA_RS05915 fac16fef175e5566c07a9e8c32307ad5 377 Pfam PF00268 Ribonucleotide reductase, small chain 32 333 3.0E-49 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 VCLMA_RS05915 fac16fef175e5566c07a9e8c32307ad5 377 Gene3D G3DSA:1.10.620.20 3 341 9.7E-125 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 VCLMA_RS05915 fac16fef175e5566c07a9e8c32307ad5 377 SUPERFAMILY SSF47240 3 341 1.03E-112 T 22-04-2016 IPR009078 Ferritin-like superfamily VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 SUPERFAMILY SSF55874 291 435 2.36E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 PANTHER PTHR24423 263 444 1.3E-45 T 22-04-2016 VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 PANTHER PTHR24423 135 193 1.3E-45 T 22-04-2016 VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 SUPERFAMILY SSF51206 17 129 3.01E-15 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 437 6.9E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 Pfam PF00027 Cyclic nucleotide-binding domain 20 99 1.2E-8 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 SMART SM00387 327 438 7.3E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 Gene3D G3DSA:2.60.120.10 19 129 9.9E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 Gene3D G3DSA:3.30.565.10 291 440 1.3E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 394 1.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 1.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 380 1.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.8E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 PANTHER PTHR24423:SF445 263 444 1.3E-45 T 22-04-2016 VCLMA_RS06210 bbe12dcc31e2137acb8453f9b56923ba 449 PANTHER PTHR24423:SF445 135 193 1.3E-45 T 22-04-2016 VCLMA_RS01905 45a20deef3d9ed9fd48417a4268dad9e 221 Pfam PF13505 Outer membrane protein beta-barrel domain 7 221 8.1E-11 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VCLMA_RS01905 45a20deef3d9ed9fd48417a4268dad9e 221 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 10 221 4.9E-52 T 22-04-2016 IPR026387 Outer membrane protein VCLMA_RS05425 bf1ca40228558c7f6b612a653798cdbc 306 PANTHER PTHR33525:SF2 16 306 9.7E-152 T 22-04-2016 VCLMA_RS05425 bf1ca40228558c7f6b612a653798cdbc 306 Gene3D G3DSA:1.10.3150.10 14 301 2.7E-53 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VCLMA_RS05425 bf1ca40228558c7f6b612a653798cdbc 306 PANTHER PTHR33525 16 306 9.7E-152 T 22-04-2016 VCLMA_RS05425 bf1ca40228558c7f6b612a653798cdbc 306 SUPERFAMILY SSF109604 32 301 1.54E-39 T 22-04-2016 VCLMA_RS05425 bf1ca40228558c7f6b612a653798cdbc 306 Pfam PF08668 HDOD domain 39 233 2.4E-36 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VCLMA_RS03480 c58554bae584c5a458544e9a65ab8768 107 SUPERFAMILY SSF55331 1 107 1.04E-38 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily VCLMA_RS03480 c58554bae584c5a458544e9a65ab8768 107 Pfam PF08921 Domain of unknown function (DUF1904) 1 106 8.8E-38 T 22-04-2016 IPR015017 Protein of unknown function DUF1904 VCLMA_RS03480 c58554bae584c5a458544e9a65ab8768 107 Gene3D G3DSA:3.30.429.10 1 107 7.4E-43 T 22-04-2016 VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 SMART SM00862 156 232 1.0E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 SMART SM00448 5 116 3.6E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 SUPERFAMILY SSF52172 3 127 2.28E-42 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 PANTHER PTHR26402:SF292 5 235 4.5E-115 T 22-04-2016 VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 Gene3D G3DSA:3.40.50.2300 4 124 7.5E-42 T 22-04-2016 VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 Pfam PF00072 Response regulator receiver domain 7 117 1.4E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 PANTHER PTHR26402 5 235 4.5E-115 T 22-04-2016 VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 SUPERFAMILY SSF46894 132 234 1.3E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 Gene3D G3DSA:1.10.10.10 133 235 1.0E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12640 d8730ee9a3ac17db35b44378c8286578 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 6.1E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 PANTHER PTHR11540 1 311 3.0E-227 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 Gene3D G3DSA:3.90.110.10 147 311 2.2E-62 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.6E-46 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.846 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 Gene3D G3DSA:3.40.50.720 1 146 4.7E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 PANTHER PTHR11540:SF22 1 311 3.0E-227 T 22-04-2016 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 SUPERFAMILY SSF51735 1 145 4.25E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 1.2E-128 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 PIRSF PIRSF000102 1 308 2.6E-60 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 SUPERFAMILY SSF56327 146 310 1.05E-41 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 VCLMA_RS02175 040a6b3bc3726d9b108e53fa5abad373 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 1.1E-47 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VCLMA_RS01865 6fa90200dec16a69f67391fea1c31d33 53 Pfam PF01894 Uncharacterised protein family UPF0047 1 49 1.8E-15 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VCLMA_RS01865 6fa90200dec16a69f67391fea1c31d33 53 PANTHER PTHR30615 1 53 6.6E-30 T 22-04-2016 VCLMA_RS01865 6fa90200dec16a69f67391fea1c31d33 53 Gene3D G3DSA:2.60.120.460 1 53 6.5E-24 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VCLMA_RS01865 6fa90200dec16a69f67391fea1c31d33 53 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 14 32 - T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VCLMA_RS01865 6fa90200dec16a69f67391fea1c31d33 53 SUPERFAMILY SSF111038 1 53 2.49E-20 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VCLMA_RS01865 6fa90200dec16a69f67391fea1c31d33 53 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 1 53 8.9E-21 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 SUPERFAMILY SSF52172 193 319 2.7E-28 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 PANTHER PTHR22617 36 176 1.7E-44 T 22-04-2016 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 SUPERFAMILY SSF50341 7 165 6.15E-32 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 Gene3D G3DSA:2.40.50.180 66 102 9.7E-4 T 22-04-2016 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 SMART SM00448 193 318 8.7E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 Gene3D G3DSA:2.30.30.40 103 154 3.4E-11 T 22-04-2016 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 Gene3D G3DSA:3.40.50.2300 191 320 4.3E-30 T 22-04-2016 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 Pfam PF00072 Response regulator receiver domain 195 316 1.5E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 SMART SM00260 14 160 9.6E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 PANTHER PTHR22617:SF27 36 176 1.7E-44 T 22-04-2016 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 Pfam PF01584 CheW-like domain 37 162 2.2E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS07440 1930d23910ddd3bdd1846a050ba80cc8 325 PIRSF PIRSF002867 1 325 3.0E-102 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 SUPERFAMILY SSF55785 151 275 5.63E-20 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 SUPERFAMILY SSF141868 467 711 6.41E-72 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 Pfam PF13426 PAS domain 177 276 5.6E-12 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 Pfam PF13426 PAS domain 59 152 2.0 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 Pfam PF00563 EAL domain 469 703 1.4E-61 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 Pfam PF00990 Diguanylate cyclase, GGDEF domain 288 445 3.2E-33 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 163 283 3.6E-15 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 Gene3D G3DSA:3.30.70.270 290 452 7.2E-41 T 22-04-2016 VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 PANTHER PTHR33121 441 707 5.1E-61 T 22-04-2016 VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 PANTHER PTHR33121:SF10 441 707 5.1E-61 T 22-04-2016 VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 SMART SM00091 43 110 2.7 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 SMART SM00091 166 232 1.4E-4 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 SMART SM00052 461 708 1.2E-72 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 SUPERFAMILY SSF55785 32 152 2.44E-8 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 SUPERFAMILY SSF55073 293 450 9.42E-38 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 SMART SM00267 277 449 1.0E-41 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 Gene3D G3DSA:3.20.20.450 469 710 1.6E-73 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 Gene3D G3DSA:3.30.450.20 152 275 2.4E-19 T 22-04-2016 VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 Gene3D G3DSA:3.30.450.20 36 151 1.4E-8 T 22-04-2016 VCLMA_RS00375 cceba1997054e28cb114e9351144f49a 718 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 285 447 2.0E-30 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 Gene3D G3DSA:3.30.460.10 1 121 2.5E-30 T 22-04-2016 VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 PIRSF PIRSF000813 1 403 2.8E-200 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 Pfam PF01966 HD domain 229 326 8.7E-9 T 22-04-2016 IPR006674 HD domain VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 SUPERFAMILY SSF81891 120 359 2.62E-54 T 22-04-2016 VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 PANTHER PTHR13734 1 236 1.2E-76 T 22-04-2016 VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 Gene3D G3DSA:1.10.3090.10 122 359 4.5E-55 T 22-04-2016 VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 403 52.328 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 1.5E-13 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.664 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 Pfam PF01743 Poly A polymerase head domain 3 122 3.1E-17 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VCLMA_RS11330 f254a24c61bf55322307f2656d4da55d 403 SUPERFAMILY SSF81301 1 119 3.49E-30 T 22-04-2016 VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 SUPERFAMILY SSF50998 37 375 4.87E-81 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 PANTHER PTHR32303:SF8 23 362 2.3E-175 T 22-04-2016 VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 Gene3D G3DSA:2.140.10.10 2 379 6.6E-70 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 41.741 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 PANTHER PTHR32303 23 362 2.3E-175 T 22-04-2016 VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 SMART SM00564 106 138 5.1 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 SMART SM00564 321 353 150.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 SMART SM00564 147 178 0.082 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 SMART SM00564 192 223 490.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 SMART SM00564 242 274 25.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 SMART SM00564 280 312 21.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 SMART SM00564 63 94 5.6E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 Pfam PF13360 PQQ-like domain 76 310 2.1E-53 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat VCLMA_RS03700 6aa8e15d0f5c4bb33c2aaba896bde6ce 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 2.4E-137 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 Pfam PF00122 E1-E2 ATPase 356 577 1.0E-59 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 357 863 7.6E-95 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 589 595 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 299 895 4.4E-186 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 ProSitePatterns PS01047 Heavy-metal-associated domain. 169 198 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 318 894 1.3E-185 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 Gene3D G3DSA:2.70.150.10 331 486 4.4E-29 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 583 799 1.7E-46 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 Gene3D G3DSA:3.40.1110.10 602 712 1.2E-19 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 ProSitePatterns PS01229 Hypothetical cof family signature 2. 785 807 - T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PANTHER PTHR24093 100 895 0.0 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 SUPERFAMILY SSF56784 585 605 8.25E-60 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 SUPERFAMILY SSF56784 643 891 8.25E-60 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 SUPERFAMILY SSF81653 388 485 8.37E-24 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00943 Copper-transporting ATPase signature 303 322 3.8E-13 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00943 Copper-transporting ATPase signature 570 585 3.8E-13 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00943 Copper-transporting ATPase signature 858 872 3.8E-13 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00943 Copper-transporting ATPase signature 819 833 3.8E-13 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00943 Copper-transporting ATPase signature 355 374 3.8E-13 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00943 Copper-transporting ATPase signature 762 779 3.8E-13 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00943 Copper-transporting ATPase signature 206 226 3.8E-13 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00943 Copper-transporting ATPase signature 508 522 3.8E-13 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 710 721 8.2E-28 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 732 742 8.2E-28 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 435 449 8.2E-28 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 785 804 8.2E-28 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 601 8.2E-28 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 808 820 8.2E-28 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 SUPERFAMILY SSF81665 486 581 2.35E-11 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 SUPERFAMILY SSF81665 351 389 2.35E-11 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 SUPERFAMILY SSF81665 834 851 2.35E-11 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 Pfam PF00403 Heavy-metal-associated domain 168 224 3.5E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 PANTHER PTHR24093:SF319 100 895 0.0 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 Gene3D G3DSA:3.40.50.1000 559 601 2.5E-57 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 Gene3D G3DSA:3.40.50.1000 713 853 2.5E-57 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 SUPERFAMILY SSF55008 160 232 8.38E-20 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 Gene3D G3DSA:3.30.70.100 164 230 1.2E-23 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 Gene3D G3DSA:3.30.70.100 65 125 8.2E-7 T 22-04-2016 VCLMA_RS10285 4ec4a2ebbf1c14ee3985354800c98907 906 SUPERFAMILY SSF55008 64 128 2.62E-6 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VCLMA_RS04115 ec9fb289d9b0a27314ca320fd14c4d87 41 Pfam PF00444 Ribosomal protein L36 1 40 6.8E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04115 ec9fb289d9b0a27314ca320fd14c4d87 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 6.8E-8 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04115 ec9fb289d9b0a27314ca320fd14c4d87 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04115 ec9fb289d9b0a27314ca320fd14c4d87 41 PANTHER PTHR18804:SF11 1 40 6.1E-21 T 22-04-2016 VCLMA_RS04115 ec9fb289d9b0a27314ca320fd14c4d87 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.38 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04115 ec9fb289d9b0a27314ca320fd14c4d87 41 PANTHER PTHR18804 1 40 6.1E-21 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04115 ec9fb289d9b0a27314ca320fd14c4d87 41 SUPERFAMILY SSF57840 1 40 1.44E-13 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS09930 e6f678268a49592bc35c15dedc8cf154 70 Pfam PF11446 Protein of unknown function (DUF2897) 5 51 1.9E-18 T 22-04-2016 IPR021550 Protein of unknown function DUF2897 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 3.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 3.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 3.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 3.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 3.9E-34 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF116726 390 437 5.75E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02080 TrkA-C domain 390 438 5.9E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02080 TrkA-C domain 156 225 4.0E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.40.50.720 1 152 4.4E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.40.50.720 233 376 1.0E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF51735 232 376 1.11E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02254 TrkA-N domain 3 115 4.9E-29 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 Pfam PF02254 TrkA-N domain 235 350 8.7E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 PANTHER PTHR13789:SF225 416 440 6.2E-85 T 22-04-2016 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 PANTHER PTHR13789:SF225 1 170 6.2E-85 T 22-04-2016 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF116726 136 223 9.02E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 PANTHER PTHR13789 416 440 6.2E-85 T 22-04-2016 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 PANTHER PTHR13789 1 170 6.2E-85 T 22-04-2016 VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 SUPERFAMILY SSF51735 1 151 6.33E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00210 3790812e29ca159efb97e88bbdaceb64 458 Gene3D G3DSA:3.30.70.1450 390 436 6.0E-4 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS03900 cdafc58ceaace2eafe2bd2b3c865d3c0 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 2.8E-29 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VCLMA_RS03900 cdafc58ceaace2eafe2bd2b3c865d3c0 244 Gene3D G3DSA:3.30.1330.30 1 92 3.1E-25 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VCLMA_RS03900 cdafc58ceaace2eafe2bd2b3c865d3c0 244 SUPERFAMILY SSF55315 5 92 8.0E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VCLMA_RS03900 cdafc58ceaace2eafe2bd2b3c865d3c0 244 PANTHER PTHR12029 6 243 1.8E-46 T 22-04-2016 VCLMA_RS03900 cdafc58ceaace2eafe2bd2b3c865d3c0 244 SUPERFAMILY SSF75217 97 243 9.81E-34 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VCLMA_RS03900 cdafc58ceaace2eafe2bd2b3c865d3c0 244 Gene3D G3DSA:3.40.1280.10 96 243 5.6E-39 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 SUPERFAMILY SSF50447 205 301 1.96E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 6.1E-233 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.1E-33 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 PANTHER PTHR23115:SF151 1 393 2.4E-290 T 22-04-2016 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 Gene3D G3DSA:2.40.30.10 300 393 5.4E-47 T 22-04-2016 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.2E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 SUPERFAMILY SSF52540 6 219 1.77E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 PANTHER PTHR23115 1 393 2.4E-290 T 22-04-2016 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 Gene3D G3DSA:2.40.30.10 209 298 2.6E-34 T 22-04-2016 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 8.4E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.753 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 SUPERFAMILY SSF50465 298 393 2.3E-35 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 Gene3D G3DSA:3.40.50.300 3 208 1.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01575 6b84a8f4723c478b7eae15a387471e22 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.8E-58 T 22-04-2016 VCLMA_RS00390 f824ad59ddb06270e9009924d99a943b 295 SUPERFAMILY SSF103481 35 131 3.14E-5 T 22-04-2016 VCLMA_RS00390 f824ad59ddb06270e9009924d99a943b 295 PANTHER PTHR22911 1 292 3.6E-72 T 22-04-2016 VCLMA_RS00390 f824ad59ddb06270e9009924d99a943b 295 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 4.4E-72 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VCLMA_RS00390 f824ad59ddb06270e9009924d99a943b 295 Pfam PF00892 EamA-like transporter family 139 277 4.3E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS00390 f824ad59ddb06270e9009924d99a943b 295 SUPERFAMILY SSF103481 183 277 1.05E-6 T 22-04-2016 VCLMA_RS00390 f824ad59ddb06270e9009924d99a943b 295 PANTHER PTHR22911:SF27 1 292 3.6E-72 T 22-04-2016 VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 PANTHER PTHR30404 1 420 3.4E-222 T 22-04-2016 VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF01476 LysM domain 475 516 7.1E-9 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF01476 LysM domain 528 570 6.8E-12 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF01476 LysM domain 409 451 1.4E-10 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 168 387 3.2E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 SUPERFAMILY SSF54106 408 451 2.49E-10 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 PANTHER PTHR30404:SF1 1 420 3.4E-222 T 22-04-2016 VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:3.10.350.10 472 517 4.4E-13 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:3.10.350.10 406 452 1.5E-16 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 SMART SM00257 408 451 2.6E-14 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 SMART SM00257 474 517 1.3E-12 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 SMART SM00257 527 570 4.3E-14 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 SMART SM00646 228 387 2.9E-68 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Pfam PF11741 AMIN domain 31 132 2.8E-17 T 22-04-2016 IPR021731 AMIN domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 SUPERFAMILY SSF53187 314 390 5.02E-52 T 22-04-2016 VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 SUPERFAMILY SSF53187 166 262 5.02E-52 T 22-04-2016 VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:3.10.350.10 527 571 2.5E-16 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:3.40.630.40 315 391 1.0E-56 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 Gene3D G3DSA:3.40.630.40 166 263 1.0E-56 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 SUPERFAMILY SSF54106 473 517 9.16E-9 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01725 d12861c50b2a64ae76e81dab7c71c78e 572 SUPERFAMILY SSF54106 527 570 1.96E-10 T 22-04-2016 IPR018392 LysM domain VCLMA_RS01300 ccd856c4494773bdab62e71450b6874f 295 PANTHER PTHR18964 1 295 4.2E-158 T 22-04-2016 VCLMA_RS01300 ccd856c4494773bdab62e71450b6874f 295 PANTHER PTHR18964:SF134 1 295 4.2E-158 T 22-04-2016 VCLMA_RS01300 ccd856c4494773bdab62e71450b6874f 295 Gene3D G3DSA:3.30.420.40 131 275 3.3E-42 T 22-04-2016 VCLMA_RS01300 ccd856c4494773bdab62e71450b6874f 295 Gene3D G3DSA:3.30.420.40 1 130 6.7E-38 T 22-04-2016 VCLMA_RS01300 ccd856c4494773bdab62e71450b6874f 295 SUPERFAMILY SSF53067 1 295 2.7E-57 T 22-04-2016 VCLMA_RS01300 ccd856c4494773bdab62e71450b6874f 295 Pfam PF00480 ROK family 3 295 4.7E-71 T 22-04-2016 IPR000600 ROK family VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 267 5.8E-90 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 Gene3D G3DSA:3.90.230.10 3 274 1.9E-97 T 22-04-2016 IPR000994 Peptidase M24, structural domain VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 Hamap MF_01974 Methionine aminopeptidase [map]. 3 268 41.665 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 PANTHER PTHR10804:SF75 1 279 2.5E-171 T 22-04-2016 VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 SUPERFAMILY SSF55920 3 268 9.55E-88 T 22-04-2016 IPR000994 Peptidase M24, structural domain VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 209 221 2.9E-15 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 2.9E-15 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 PRINTS PR00599 Methionine aminopeptidase-1 signature 179 191 2.9E-15 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 PANTHER PTHR10804 1 279 2.5E-171 T 22-04-2016 VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 185 203 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 VCLMA_RS10500 76c9fe79454e2da53afab1f8c695cb66 280 Pfam PF00557 Metallopeptidase family M24 12 259 2.4E-52 T 22-04-2016 IPR000994 Peptidase M24, structural domain VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 Gene3D G3DSA:3.40.228.10 184 393 4.0E-56 T 22-04-2016 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 Gene3D G3DSA:3.40.50.740 79 180 3.5E-47 T 22-04-2016 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 Gene3D G3DSA:3.40.50.740 394 499 3.5E-47 T 22-04-2016 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 31 5.9E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 43 813 0.0 T 22-04-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 498 515 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 Pfam PF00384 Molybdopterin oxidoreductase 86 555 1.3E-99 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 PANTHER PTHR11615 443 814 0.0 T 22-04-2016 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 PANTHER PTHR11615 52 425 0.0 T 22-04-2016 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 Gene3D G3DSA:3.90.55.10 500 606 1.3E-34 T 22-04-2016 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 SUPERFAMILY SSF53706 47 665 8.64E-161 T 22-04-2016 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 SUPERFAMILY SSF50692 670 813 1.29E-40 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 Gene3D G3DSA:2.40.40.20 653 808 1.9E-54 T 22-04-2016 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 Pfam PF01568 Molydopterin dinucleotide binding domain 675 791 2.2E-25 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 PANTHER PTHR11615:SF19 443 814 0.0 T 22-04-2016 VCLMA_RS08955 463ab4aae12bb037bbb99cbc06282590 815 PANTHER PTHR11615:SF19 52 425 0.0 T 22-04-2016 VCLMA_RS05255 20d66ad3f95f7aee87e33de28f77553c 139 SUPERFAMILY SSF54427 4 131 1.83E-27 T 22-04-2016 IPR032710 NTF2-like domain VCLMA_RS05255 20d66ad3f95f7aee87e33de28f77553c 139 Gene3D G3DSA:3.10.450.50 4 134 7.4E-29 T 22-04-2016 IPR032710 NTF2-like domain VCLMA_RS05255 20d66ad3f95f7aee87e33de28f77553c 139 Pfam PF12680 SnoaL-like domain 6 109 1.5E-16 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain VCLMA_RS09260 0fe0de66cdb8ce94c690572d79a65e1f 255 PANTHER PTHR10060:SF20 1 253 1.2E-132 T 22-04-2016 VCLMA_RS09260 0fe0de66cdb8ce94c690572d79a65e1f 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VCLMA_RS09260 0fe0de66cdb8ce94c690572d79a65e1f 255 SUPERFAMILY SSF51556 1 253 1.36E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase VCLMA_RS09260 0fe0de66cdb8ce94c690572d79a65e1f 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 5.0E-93 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VCLMA_RS09260 0fe0de66cdb8ce94c690572d79a65e1f 255 PANTHER PTHR10060 1 253 1.2E-132 T 22-04-2016 IPR001130 TatD family GO:0016788 VCLMA_RS09260 0fe0de66cdb8ce94c690572d79a65e1f 255 Pfam PF01026 TatD related DNase 3 253 9.1E-78 T 22-04-2016 IPR001130 TatD family GO:0016788 VCLMA_RS09260 0fe0de66cdb8ce94c690572d79a65e1f 255 Gene3D G3DSA:3.20.20.140 1 253 6.6E-89 T 22-04-2016 VCLMA_RS09260 0fe0de66cdb8ce94c690572d79a65e1f 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VCLMA_RS09260 0fe0de66cdb8ce94c690572d79a65e1f 255 PIRSF PIRSF005902 1 255 3.0E-82 T 22-04-2016 IPR001130 TatD family GO:0016788 VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 Pfam PF00232 Glycosyl hydrolase family 1 4 475 7.0E-138 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 SUPERFAMILY SSF51445 3 471 2.47E-165 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 Gene3D G3DSA:3.20.20.80 6 476 4.4E-155 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 PANTHER PTHR10353:SF35 6 478 4.5E-242 T 22-04-2016 VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 PANTHER PTHR10353 6 478 4.5E-242 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 2.7E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 2.7E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 2.7E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 2.7E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VCLMA_RS07230 0f348ad34cc823c1ca9d1f69fc9d7eab 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 2.7E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VCLMA_RS12710 e164ad06e8caa91927949c144789a00b 117 PANTHER PTHR38779:SF2 1 117 2.3E-51 T 22-04-2016 VCLMA_RS12710 e164ad06e8caa91927949c144789a00b 117 SUPERFAMILY SSF54523 37 115 1.88E-23 T 22-04-2016 VCLMA_RS12710 e164ad06e8caa91927949c144789a00b 117 TIGRFAM TIGR01707 gspI: type II secretion system protein I 6 103 4.4E-43 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12710 e164ad06e8caa91927949c144789a00b 117 PANTHER PTHR38779 1 117 2.3E-51 T 22-04-2016 VCLMA_RS12710 e164ad06e8caa91927949c144789a00b 117 Gene3D G3DSA:3.30.1300.30 32 117 2.1E-30 T 22-04-2016 VCLMA_RS12710 e164ad06e8caa91927949c144789a00b 117 Pfam PF13633 Prokaryotic N-terminal methylation site 4 29 9.0E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS12710 e164ad06e8caa91927949c144789a00b 117 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS12710 e164ad06e8caa91927949c144789a00b 117 Pfam PF02501 Type II secretion system (T2SS), protein I 40 115 1.7E-22 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12710 e164ad06e8caa91927949c144789a00b 117 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 24 8.3E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS00195 42fcd4981e440abc594b6b8ed4866c1a 213 PANTHER PTHR20855 9 213 7.3E-76 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VCLMA_RS00195 42fcd4981e440abc594b6b8ed4866c1a 213 Pfam PF03006 Haemolysin-III related 6 203 7.3E-38 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VCLMA_RS00195 42fcd4981e440abc594b6b8ed4866c1a 213 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 9 210 8.2E-70 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VCLMA_RS00195 42fcd4981e440abc594b6b8ed4866c1a 213 PANTHER PTHR20855:SF3 9 213 7.3E-76 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 VCLMA_RS00465 2f4f78f17693416debe6bb006478ea91 451 PANTHER PTHR11206 9 440 2.6E-141 T 22-04-2016 VCLMA_RS00465 2f4f78f17693416debe6bb006478ea91 451 Pfam PF01554 MatE 249 398 2.1E-15 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS00465 2f4f78f17693416debe6bb006478ea91 451 Pfam PF01554 MatE 23 182 2.6E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS00465 2f4f78f17693416debe6bb006478ea91 451 PANTHER PTHR11206:SF94 9 440 2.6E-141 T 22-04-2016 VCLMA_RS00465 2f4f78f17693416debe6bb006478ea91 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 417 4.5E-78 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 SUPERFAMILY SSF143800 1 80 3.1E-23 T 22-04-2016 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 Pfam PF01197 Ribosomal protein L31 1 78 1.2E-27 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 9.7E-20 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 27.723 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.4E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.4E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.4E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 PANTHER PTHR33280:SF3 1 83 8.6E-44 T 22-04-2016 VCLMA_RS04110 d4c98095f80aa392f75b8b583a44e473 85 PANTHER PTHR33280 1 83 8.6E-44 T 22-04-2016 VCLMA_RS04125 72d78351d3f1ba47586801cb53ffdcbb 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 30.674 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 VCLMA_RS04125 72d78351d3f1ba47586801cb53ffdcbb 149 PANTHER PTHR35146 1 147 2.7E-55 T 22-04-2016 VCLMA_RS04125 72d78351d3f1ba47586801cb53ffdcbb 149 PANTHER PTHR35146:SF1 1 147 2.7E-55 T 22-04-2016 VCLMA_RS04125 72d78351d3f1ba47586801cb53ffdcbb 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 6.3E-48 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 VCLMA_RS01965 730222992d2d20d1bc1ecfc92c2675ea 444 Pfam PF00999 Sodium/hydrogen exchanger family 28 416 9.1E-57 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VCLMA_RS01965 730222992d2d20d1bc1ecfc92c2675ea 444 PANTHER PTHR10110:SF86 8 417 5.5E-97 T 22-04-2016 VCLMA_RS01965 730222992d2d20d1bc1ecfc92c2675ea 444 PANTHER PTHR10110 8 417 5.5E-97 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 Pfam PF01145 SPFH domain / Band 7 family 26 195 1.6E-33 T 22-04-2016 IPR001107 Band 7 domain VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 SUPERFAMILY SSF117892 53 187 2.75E-41 T 22-04-2016 IPR001107 Band 7 domain VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 ProSitePatterns PS01270 Band 7 protein family signature. 136 164 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 SMART SM00244 22 180 3.6E-59 T 22-04-2016 IPR001107 Band 7 domain VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 PANTHER PTHR10264:SF27 6 301 5.7E-120 T 22-04-2016 VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 156 174 2.02E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 112 129 2.02E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 77 98 2.02E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 175 196 2.02E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 PRINTS PR00721 Stomatin signature 132 155 2.02E-28 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 PANTHER PTHR10264 6 301 5.7E-120 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VCLMA_RS04565 abfae0b0a3146757063e09fdcbe130f9 306 Pfam PF16200 C-terminal region of band_7 242 302 5.5E-7 T 22-04-2016 IPR032435 Band 7, C-terminal extension VCLMA_RS03365 67a7df3a4888f550f4fdabe29d838ff4 330 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 326 46.567 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 VCLMA_RS03365 67a7df3a4888f550f4fdabe29d838ff4 330 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 283 1.7E-81 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VCLMA_RS03365 67a7df3a4888f550f4fdabe29d838ff4 330 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 228 245 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VCLMA_RS03365 67a7df3a4888f550f4fdabe29d838ff4 330 Gene3D G3DSA:3.20.20.300 3 286 5.1E-91 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VCLMA_RS03365 67a7df3a4888f550f4fdabe29d838ff4 330 SUPERFAMILY SSF51445 2 287 3.58E-87 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS03365 67a7df3a4888f550f4fdabe29d838ff4 330 PANTHER PTHR30480 4 323 3.8E-123 T 22-04-2016 VCLMA_RS03365 67a7df3a4888f550f4fdabe29d838ff4 330 PANTHER PTHR30480:SF7 4 323 3.8E-123 T 22-04-2016 VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 SMART SM00052 412 660 2.5E-105 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 Gene3D G3DSA:3.30.70.270 243 410 4.0E-54 T 22-04-2016 VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 PANTHER PTHR33121 354 675 4.0E-86 T 22-04-2016 VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 SUPERFAMILY SSF141868 418 671 7.72E-88 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 238 400 3.7E-38 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 Pfam PF00990 Diguanylate cyclase, GGDEF domain 242 398 1.4E-44 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 Gene3D G3DSA:3.20.20.450 415 665 2.0E-94 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 Pfam PF00563 EAL domain 420 655 1.2E-73 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 SMART SM00267 231 402 7.7E-59 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 SUPERFAMILY SSF55073 247 404 3.61E-47 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS03215 88f02e43db39fdcda0318918a02e0f46 685 PANTHER PTHR33121:SF13 354 675 4.0E-86 T 22-04-2016 VCLMA_RS08210 6d4ed3147f3d85dc956fa1cc8424ef4e 287 PANTHER PTHR18964 1 287 9.3E-113 T 22-04-2016 VCLMA_RS08210 6d4ed3147f3d85dc956fa1cc8424ef4e 287 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 287 48.103 T 22-04-2016 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138|UniPathway: UPA00629 VCLMA_RS08210 6d4ed3147f3d85dc956fa1cc8424ef4e 287 PANTHER PTHR18964:SF121 1 287 9.3E-113 T 22-04-2016 VCLMA_RS08210 6d4ed3147f3d85dc956fa1cc8424ef4e 287 Gene3D G3DSA:3.30.420.40 135 259 3.3E-43 T 22-04-2016 VCLMA_RS08210 6d4ed3147f3d85dc956fa1cc8424ef4e 287 Pfam PF00480 ROK family 4 285 9.6E-62 T 22-04-2016 IPR000600 ROK family VCLMA_RS08210 6d4ed3147f3d85dc956fa1cc8424ef4e 287 ProSitePatterns PS01125 ROK family signature. 128 155 - T 22-04-2016 IPR000600 ROK family VCLMA_RS08210 6d4ed3147f3d85dc956fa1cc8424ef4e 287 Gene3D G3DSA:3.30.420.40 2 134 2.0E-30 T 22-04-2016 VCLMA_RS08210 6d4ed3147f3d85dc956fa1cc8424ef4e 287 SUPERFAMILY SSF53067 1 285 1.95E-50 T 22-04-2016 VCLMA_RS08265 6d4ed3147f3d85dc956fa1cc8424ef4e 287 PANTHER PTHR18964 1 287 9.3E-113 T 22-04-2016 VCLMA_RS08265 6d4ed3147f3d85dc956fa1cc8424ef4e 287 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 287 48.103 T 22-04-2016 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138|UniPathway: UPA00629 VCLMA_RS08265 6d4ed3147f3d85dc956fa1cc8424ef4e 287 PANTHER PTHR18964:SF121 1 287 9.3E-113 T 22-04-2016 VCLMA_RS08265 6d4ed3147f3d85dc956fa1cc8424ef4e 287 Gene3D G3DSA:3.30.420.40 135 259 3.3E-43 T 22-04-2016 VCLMA_RS08265 6d4ed3147f3d85dc956fa1cc8424ef4e 287 Pfam PF00480 ROK family 4 285 9.6E-62 T 22-04-2016 IPR000600 ROK family VCLMA_RS08265 6d4ed3147f3d85dc956fa1cc8424ef4e 287 ProSitePatterns PS01125 ROK family signature. 128 155 - T 22-04-2016 IPR000600 ROK family VCLMA_RS08265 6d4ed3147f3d85dc956fa1cc8424ef4e 287 Gene3D G3DSA:3.30.420.40 2 134 2.0E-30 T 22-04-2016 VCLMA_RS08265 6d4ed3147f3d85dc956fa1cc8424ef4e 287 SUPERFAMILY SSF53067 1 285 1.95E-50 T 22-04-2016 VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 400 45.267 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 PANTHER PTHR11986:SF71 1 403 9.8E-207 T 22-04-2016 VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 Gene3D G3DSA:3.40.640.10 59 288 1.5E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 402 2.2E-209 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 Gene3D G3DSA:3.90.1150.10 289 401 1.2E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 SUPERFAMILY SSF53383 16 399 3.4E-127 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 5.6E-149 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 Pfam PF00202 Aminotransferase class-III 22 399 9.5E-126 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VCLMA_RS12195 3cc241b83b7cdaf0ac9af7e83433f500 403 PANTHER PTHR11986 1 403 9.8E-207 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 Gene3D G3DSA:3.40.190.10 90 176 1.7E-18 T 22-04-2016 VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 Gene3D G3DSA:1.10.10.10 1 84 3.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 SUPERFAMILY SSF53850 87 295 4.07E-40 T 22-04-2016 VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 PANTHER PTHR30346 1 297 1.1E-134 T 22-04-2016 VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 SUPERFAMILY SSF46785 1 85 8.82E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 PANTHER PTHR30346:SF15 1 297 1.1E-134 T 22-04-2016 VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 Pfam PF03466 LysR substrate binding domain 89 293 1.0E-44 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 Gene3D G3DSA:3.40.190.10 177 267 6.6E-30 T 22-04-2016 VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.1E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS12285 e3a44274f5b4c45de5c67f58002e4bfb 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.9E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS09460 b42252a44ddeafe74dceb0d3351c30b2 160 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 145 32.2 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VCLMA_RS09460 b42252a44ddeafe74dceb0d3351c30b2 160 Gene3D G3DSA:2.40.50.140 26 129 4.1E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS09460 b42252a44ddeafe74dceb0d3351c30b2 160 PANTHER PTHR34128:SF1 1 160 6.5E-79 T 22-04-2016 VCLMA_RS09460 b42252a44ddeafe74dceb0d3351c30b2 160 PANTHER PTHR34128 1 160 6.5E-79 T 22-04-2016 VCLMA_RS09460 b42252a44ddeafe74dceb0d3351c30b2 160 SUPERFAMILY SSF82093 30 141 5.23E-39 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VCLMA_RS09460 b42252a44ddeafe74dceb0d3351c30b2 160 Pfam PF03100 CcmE 4 135 8.6E-45 T 22-04-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 PANTHER PTHR11751 1 93 3.8E-39 T 22-04-2016 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 Pfam PF07702 UTRA domain 90 227 1.9E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 SMART SM00866 90 227 5.2E-34 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 PANTHER PTHR11751:SF364 1 93 3.8E-39 T 22-04-2016 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 SUPERFAMILY SSF46785 3 71 5.71E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 SUPERFAMILY SSF64288 94 230 2.51E-40 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 2.9E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 2.9E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 Gene3D G3DSA:3.40.1410.10 87 223 5.2E-48 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 2.0E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 3 232 4.8E-100 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 SMART SM00345 8 67 3.3E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS05680 e02c1b7385fd14edb5a83c97095e8aa3 236 Gene3D G3DSA:1.10.10.10 3 71 4.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 Gene3D G3DSA:3.40.50.970 358 557 1.7E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 568 9.7E-270 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 PANTHER PTHR18968:SF116 2 573 0.0 T 22-04-2016 VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 330 1.3E-45 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 SUPERFAMILY SSF52467 190 363 5.01E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 544 1.3E-48 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 PANTHER PTHR18968 2 573 0.0 T 22-04-2016 VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 Gene3D G3DSA:3.40.50.970 2 170 1.1E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 SUPERFAMILY SSF52518 372 566 2.95E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 Gene3D G3DSA:3.40.50.1220 191 357 3.4E-66 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 SUPERFAMILY SSF52518 1 178 2.57E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VCLMA_RS11505 192b24feafa9f0a91f8d13b263752f56 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 2.8E-59 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VCLMA_RS07490 514a6e181283d2312b4ce6bf58681015 313 PANTHER PTHR20919 2 313 7.7E-165 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VCLMA_RS07490 514a6e181283d2312b4ce6bf58681015 313 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.363 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VCLMA_RS07490 514a6e181283d2312b4ce6bf58681015 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.5E-135 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VCLMA_RS07490 514a6e181283d2312b4ce6bf58681015 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-140 T 22-04-2016 VCLMA_RS07490 514a6e181283d2312b4ce6bf58681015 313 PIRSF PIRSF000450 1 309 5.2E-150 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VCLMA_RS07490 514a6e181283d2312b4ce6bf58681015 313 Gene3D G3DSA:3.40.50.880 34 301 9.2E-123 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS07490 514a6e181283d2312b4ce6bf58681015 313 PANTHER PTHR20919:SF0 2 313 7.7E-165 T 22-04-2016 VCLMA_RS07490 514a6e181283d2312b4ce6bf58681015 313 SUPERFAMILY SSF52317 17 297 4.91E-103 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS07490 514a6e181283d2312b4ce6bf58681015 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.1E-170 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 PANTHER PTHR22594:SF5 370 571 7.6E-254 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 PANTHER PTHR22594:SF5 1 296 7.6E-254 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 PANTHER PTHR22594 370 571 7.6E-254 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 PANTHER PTHR22594 1 296 7.6E-254 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 SUPERFAMILY SSF55681 420 582 1.05E-102 T 22-04-2016 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 SUPERFAMILY SSF55681 108 287 1.05E-102 T 22-04-2016 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 SUPERFAMILY SSF50249 1 105 7.05E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 Gene3D G3DSA:3.30.930.10 414 584 1.7E-110 T 22-04-2016 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 Gene3D G3DSA:3.30.930.10 131 275 1.7E-110 T 22-04-2016 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 Gene3D G3DSA:2.40.50.140 1 106 2.3E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 SUPERFAMILY SSF55261 288 419 4.74E-47 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 6.9E-16 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 Pfam PF02938 GAD domain 307 406 1.5E-31 T 22-04-2016 IPR029351 GAD domain VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 36.885 T 22-04-2016 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 Gene3D G3DSA:3.30.1360.30 276 413 6.7E-50 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 582 2.8E-265 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 9.4E-106 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS05490 0f713efee5a6aa48fcf5b8856b129d36 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 2.7E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS09095 35eabac46a7430b5aee6dfcdbe1d9104 200 Pfam PF03942 DTW domain 3 185 3.7E-50 T 22-04-2016 IPR005636 DTW VCLMA_RS09095 35eabac46a7430b5aee6dfcdbe1d9104 200 SMART SM01144 1 190 3.6E-67 T 22-04-2016 IPR005636 DTW VCLMA_RS09095 35eabac46a7430b5aee6dfcdbe1d9104 200 PANTHER PTHR21392 1 199 2.7E-52 T 22-04-2016 VCLMA_RS04690 211a88ad2bfe553016831c69801677b0 198 Pfam PF05036 Sporulation related domain 122 187 3.6E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VCLMA_RS04690 211a88ad2bfe553016831c69801677b0 198 PANTHER PTHR38687:SF1 2 198 1.1E-72 T 22-04-2016 VCLMA_RS04690 211a88ad2bfe553016831c69801677b0 198 Gene3D G3DSA:3.30.70.1070 117 195 1.5E-20 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VCLMA_RS04690 211a88ad2bfe553016831c69801677b0 198 PANTHER PTHR38687 2 198 1.1E-72 T 22-04-2016 VCLMA_RS04690 211a88ad2bfe553016831c69801677b0 198 SUPERFAMILY SSF110997 121 194 2.48E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VCLMA_RS02120 4233c15987708d4d330c9fd9fccfb492 1279 Pfam PF13502 AsmA-like C-terminal region 1017 1257 9.6E-61 T 22-04-2016 IPR032712 AsmA-like, C-terminal VCLMA_RS02120 4233c15987708d4d330c9fd9fccfb492 1279 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 1 1267 0.0 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 VCLMA_RS02120 4233c15987708d4d330c9fd9fccfb492 1279 Pfam PF13116 Protein of unknown function 493 779 1.2E-90 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 VCLMA_RS02120 4233c15987708d4d330c9fd9fccfb492 1279 PANTHER PTHR38690 1 1276 0.0 T 22-04-2016 VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 PANTHER PTHR30537:SF26 1 299 2.4E-152 T 22-04-2016 VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 SUPERFAMILY SSF46785 3 85 2.62E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 Gene3D G3DSA:1.10.10.10 1 86 4.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 SUPERFAMILY SSF53850 92 297 9.23E-38 T 22-04-2016 VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 PANTHER PTHR30537 1 299 2.4E-152 T 22-04-2016 VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 Gene3D G3DSA:3.40.190.10 180 259 4.9E-16 T 22-04-2016 VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 Gene3D G3DSA:3.40.190.10 94 179 4.0E-34 T 22-04-2016 VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 Pfam PF03466 LysR substrate binding domain 91 291 2.2E-36 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS04195 f75217248b934540b47f55e3e556762f 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS11265 0c8c3702d69cf86a4894701d1e741427 272 PANTHER PTHR12905:SF7 8 32 1.8E-114 T 22-04-2016 VCLMA_RS11265 0c8c3702d69cf86a4894701d1e741427 272 PANTHER PTHR12905:SF7 48 272 1.8E-114 T 22-04-2016 VCLMA_RS11265 0c8c3702d69cf86a4894701d1e741427 272 PANTHER PTHR12905 8 32 1.8E-114 T 22-04-2016 VCLMA_RS11265 0c8c3702d69cf86a4894701d1e741427 272 SUPERFAMILY SSF56300 12 270 3.96E-59 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS11265 0c8c3702d69cf86a4894701d1e741427 272 Gene3D G3DSA:3.60.21.10 9 253 6.7E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS11265 0c8c3702d69cf86a4894701d1e741427 272 PANTHER PTHR12905 48 272 1.8E-114 T 22-04-2016 VCLMA_RS11265 0c8c3702d69cf86a4894701d1e741427 272 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 12 258 40.941 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VCLMA_RS11265 0c8c3702d69cf86a4894701d1e741427 272 Pfam PF00149 Calcineurin-like phosphoesterase 13 204 1.0E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VCLMA_RS11265 0c8c3702d69cf86a4894701d1e741427 272 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 203 258 2.0E-27 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 226 241 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 246 5.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 100 119 5.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 247 268 5.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 271 296 5.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 139 158 5.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 139 5.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 102 297 1.8E-82 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PANTHER PTHR30587:SF0 86 299 9.7E-121 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 274 286 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PANTHER PTHR30587 86 299 9.7E-121 T 22-04-2016 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 107 2.3E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 198 210 2.3E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 170 184 2.3E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 158 170 2.3E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 219 231 2.3E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 287 297 2.3E-17 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VCLMA_RS09785 821d832222f696c863f845a79fb19482 299 Pfam PF00813 FliP family 102 293 4.1E-79 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VCLMA_RS06575 2aa63216078eaee278fe9d7488ab3ba1 411 PANTHER PTHR32089:SF39 81 308 4.6E-56 T 22-04-2016 VCLMA_RS06575 2aa63216078eaee278fe9d7488ab3ba1 411 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 165 305 9.1E-29 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06575 2aa63216078eaee278fe9d7488ab3ba1 411 PANTHER PTHR32089 81 308 4.6E-56 T 22-04-2016 VCLMA_RS06575 2aa63216078eaee278fe9d7488ab3ba1 411 SMART SM00283 99 346 1.8E-9 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06575 2aa63216078eaee278fe9d7488ab3ba1 411 Gene3D G3DSA:1.10.287.950 115 303 2.0E-36 T 22-04-2016 VCLMA_RS06575 2aa63216078eaee278fe9d7488ab3ba1 411 SUPERFAMILY SSF58104 105 309 1.05E-41 T 22-04-2016 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 SUPERFAMILY SSF47384 232 308 5.69E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 SMART SM00387 353 463 3.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 PANTHER PTHR24423:SF553 187 461 1.2E-193 T 22-04-2016 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 PANTHER PTHR24423:SF553 30 59 1.2E-193 T 22-04-2016 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 SUPERFAMILY SSF55874 299 461 1.44E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 38 171 3.0E-60 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 Pfam PF00672 HAMP domain 176 242 1.5E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 PANTHER PTHR24423 187 461 1.2E-193 T 22-04-2016 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 PANTHER PTHR24423 30 59 1.2E-193 T 22-04-2016 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 Gene3D G3DSA:3.30.565.10 313 463 6.8E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 SMART SM00388 247 309 1.1E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 462 6.0E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 307 4.9E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 441 1.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 1.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.4E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 Gene3D G3DSA:1.10.287.130 237 305 1.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12535 4bb4f2c4b7d9d4ef6605139bec736c34 464 SMART SM00304 193 246 2.9E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS00090 b60bc6772d02f4ae1881ff3c61462141 418 Gene3D G3DSA:3.90.1150.10 267 410 3.4E-18 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS00090 b60bc6772d02f4ae1881ff3c61462141 418 SUPERFAMILY SSF53383 13 411 5.64E-62 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS00090 b60bc6772d02f4ae1881ff3c61462141 418 PANTHER PTHR11751 11 415 5.1E-190 T 22-04-2016 VCLMA_RS00090 b60bc6772d02f4ae1881ff3c61462141 418 PANTHER PTHR11751:SF419 11 415 5.1E-190 T 22-04-2016 VCLMA_RS00090 b60bc6772d02f4ae1881ff3c61462141 418 Gene3D G3DSA:3.40.640.10 61 266 1.1E-40 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS00090 b60bc6772d02f4ae1881ff3c61462141 418 Pfam PF00155 Aminotransferase class I and II 68 399 1.6E-26 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 1.3E-96 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 PANTHER PTHR18895:SF66 4 299 3.0E-184 T 22-04-2016 VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 SUPERFAMILY SSF53335 16 293 2.81E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 Gene3D G3DSA:3.40.50.150 108 289 1.5E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 PIRSF PIRSF037167 2 307 1.3E-149 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 Pfam PF05175 Methyltransferase small domain 134 217 2.5E-18 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.529 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 Gene3D G3DSA:1.10.8.10 15 106 1.6E-6 T 22-04-2016 VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 PANTHER PTHR18895 4 299 3.0E-184 T 22-04-2016 VCLMA_RS09760 851e4bb367b40b873bb07f8c0992141e 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 8.7E-138 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VCLMA_RS07505 8182abf955dfb04438b2e52a4cf5c5a5 362 PIRSF PIRSF029038 35 362 3.1E-157 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VCLMA_RS07505 8182abf955dfb04438b2e52a4cf5c5a5 362 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 46 352 54.888 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VCLMA_RS07505 8182abf955dfb04438b2e52a4cf5c5a5 362 Pfam PF05971 Protein of unknown function (DUF890) 44 350 1.1E-154 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VCLMA_RS07505 8182abf955dfb04438b2e52a4cf5c5a5 362 SUPERFAMILY SSF53335 85 350 8.91E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS07505 8182abf955dfb04438b2e52a4cf5c5a5 362 Gene3D G3DSA:3.40.50.150 134 238 2.0E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS07505 8182abf955dfb04438b2e52a4cf5c5a5 362 PANTHER PTHR13393:SF0 33 357 6.9E-124 T 22-04-2016 VCLMA_RS07505 8182abf955dfb04438b2e52a4cf5c5a5 362 PANTHER PTHR13393 33 357 6.9E-124 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 Pfam PF10442 FIST C domain 221 340 7.2E-7 T 22-04-2016 IPR019494 FIST, C-domain VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 Gene3D G3DSA:3.30.70.270 419 570 3.0E-10 T 22-04-2016 VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 SMART SM00052 592 829 3.2E-43 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 SUPERFAMILY SSF141868 599 826 6.02E-55 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 SUPERFAMILY SSF55073 423 573 1.8E-9 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 Pfam PF08495 FIST N domain 30 215 5.6E-20 T 22-04-2016 IPR013702 FIST domain, N-terminal VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 SMART SM00267 406 579 0.0019 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 Pfam PF00563 EAL domain 599 825 1.0E-57 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 SMART SM00897 27 216 5.9E-25 T 22-04-2016 IPR013702 FIST domain, N-terminal VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 SMART SM01204 217 343 1.2E-10 T 22-04-2016 IPR019494 FIST, C-domain VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 PANTHER PTHR33121 591 828 2.0E-47 T 22-04-2016 VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 PANTHER PTHR33121:SF10 591 828 2.0E-47 T 22-04-2016 VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 Pfam PF00990 Diguanylate cyclase, GGDEF domain 419 480 1.8E-8 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS00645 f15503f486168d856a1bb79fd8cd49bd 829 Gene3D G3DSA:3.20.20.450 596 826 4.4E-55 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00430 496445aa6e0811642d36085f8f56ed58 260 SUPERFAMILY SSF53335 28 258 8.83E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00430 496445aa6e0811642d36085f8f56ed58 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VCLMA_RS00430 496445aa6e0811642d36085f8f56ed58 260 PANTHER PTHR10108:SF864 1 260 6.0E-189 T 22-04-2016 VCLMA_RS00430 496445aa6e0811642d36085f8f56ed58 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VCLMA_RS00430 496445aa6e0811642d36085f8f56ed58 260 PANTHER PTHR10108 1 260 6.0E-189 T 22-04-2016 VCLMA_RS00430 496445aa6e0811642d36085f8f56ed58 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 7.8E-84 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VCLMA_RS00430 496445aa6e0811642d36085f8f56ed58 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 29 259 3.0E-103 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VCLMA_RS00430 496445aa6e0811642d36085f8f56ed58 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.358 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VCLMA_RS00430 496445aa6e0811642d36085f8f56ed58 260 Gene3D G3DSA:3.40.50.150 33 256 1.5E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS02955 a83467d77f75013e84f289ebab867916 337 PIRSF PIRSF002825 4 337 1.5E-97 T 22-04-2016 IPR026045 Ferric binding protein VCLMA_RS02955 a83467d77f75013e84f289ebab867916 337 SUPERFAMILY SSF53850 23 334 6.14E-75 T 22-04-2016 VCLMA_RS02955 a83467d77f75013e84f289ebab867916 337 PANTHER PTHR30006:SF4 1 337 6.5E-209 T 22-04-2016 VCLMA_RS02955 a83467d77f75013e84f289ebab867916 337 Gene3D G3DSA:3.40.190.10 268 321 5.1E-31 T 22-04-2016 VCLMA_RS02955 a83467d77f75013e84f289ebab867916 337 Gene3D G3DSA:3.40.190.10 1 119 5.1E-31 T 22-04-2016 VCLMA_RS02955 a83467d77f75013e84f289ebab867916 337 PANTHER PTHR30006 1 337 6.5E-209 T 22-04-2016 VCLMA_RS02955 a83467d77f75013e84f289ebab867916 337 Pfam PF13343 Bacterial extracellular solute-binding protein 73 297 1.3E-18 T 22-04-2016 VCLMA_RS02955 a83467d77f75013e84f289ebab867916 337 Gene3D G3DSA:3.40.190.10 124 267 3.2E-48 T 22-04-2016 VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 SUPERFAMILY SSF81891 181 393 7.98E-48 T 22-04-2016 VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 7 448 37.544 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 PANTHER PTHR13734 17 430 6.7E-125 T 22-04-2016 VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 SUPERFAMILY SSF81301 23 180 4.8E-40 T 22-04-2016 VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 Gene3D G3DSA:1.10.3090.10 183 418 5.2E-49 T 22-04-2016 VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 PANTHER PTHR13734:SF47 17 430 6.7E-125 T 22-04-2016 VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 271 2.2E-21 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 Gene3D G3DSA:3.30.460.10 33 182 1.6E-49 T 22-04-2016 VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 Pfam PF12626 Polymerase A arginine-rich C-terminus 329 446 9.9E-38 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 453 7.8E-159 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VCLMA_RS02895 a4328bb111eb09b3508cfe2690feca26 457 Pfam PF01743 Poly A polymerase head domain 52 183 1.2E-38 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 VCLMA_RS00330 9d1cf1ce84024b9b78255e72a173dafa 258 Gene3D G3DSA:3.40.50.720 3 245 5.7E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00330 9d1cf1ce84024b9b78255e72a173dafa 258 PANTHER PTHR10953:SF158 1 249 2.7E-143 T 22-04-2016 VCLMA_RS00330 9d1cf1ce84024b9b78255e72a173dafa 258 TIGRFAM TIGR02356 adenyl_thiF: thiazole biosynthesis adenylyltransferase ThiF 9 209 6.2E-84 T 22-04-2016 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF KEGG: 00730+2.7.7.73|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VCLMA_RS00330 9d1cf1ce84024b9b78255e72a173dafa 258 SUPERFAMILY SSF69572 2 245 8.5E-75 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VCLMA_RS00330 9d1cf1ce84024b9b78255e72a173dafa 258 Pfam PF00899 ThiF family 10 241 5.6E-57 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VCLMA_RS00330 9d1cf1ce84024b9b78255e72a173dafa 258 PANTHER PTHR10953 1 249 2.7E-143 T 22-04-2016 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 Gene3D G3DSA:3.40.140.20 378 520 4.1E-60 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 Gene3D G3DSA:3.40.140.20 254 372 2.3E-49 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 PANTHER PTHR11692:SF2 5 530 0.0 T 22-04-2016 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 SMART SM00798 137 462 1.4E-212 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 Gene3D G3DSA:3.40.50.1380 5 190 4.3E-87 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 SUPERFAMILY SSF53927 222 530 4.21E-128 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 SMART SM00851 19 132 4.8E-61 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 SUPERFAMILY SSF52335 7 196 7.2E-72 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 PANTHER PTHR11692 5 530 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 PIRSF PIRSF000414 1 530 2.3E-227 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 Pfam PF02142 MGS-like domain 19 132 3.1E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 461 5.7E-117 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 530 7.1E-258 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VCLMA_RS01330 3cf076056e84f9690bbbf4f86dab0bca 530 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 530 45.216 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 Gene3D G3DSA:3.40.50.2300 6 118 2.1E-16 T 22-04-2016 VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 SMART SM00448 6 117 1.3E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 PIRSF PIRSF036883 1 380 4.7E-197 T 22-04-2016 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 PANTHER PTHR33525:SF3 139 278 4.8E-20 T 22-04-2016 VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 SUPERFAMILY SSF52172 6 125 1.42E-16 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 Pfam PF08668 HDOD domain 142 278 1.2E-26 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 Pfam PF00072 Response regulator receiver domain 8 113 2.5E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 Gene3D G3DSA:1.10.3150.10 119 374 7.1E-48 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 PANTHER PTHR33525 139 278 4.8E-20 T 22-04-2016 VCLMA_RS05080 27ed1c67670c9fad9b228670be830afb 380 SUPERFAMILY SSF109604 133 371 2.54E-37 T 22-04-2016 VCLMA_RS12025 76ccbe69aefad1bfb795b52145b3e6f0 101 SUPERFAMILY SSF57716 2 101 1.71E-36 T 22-04-2016 VCLMA_RS12025 76ccbe69aefad1bfb795b52145b3e6f0 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.729 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid VCLMA_RS12025 76ccbe69aefad1bfb795b52145b3e6f0 101 Gene3D G3DSA:4.10.830.10 41 101 2.1E-29 T 22-04-2016 VCLMA_RS12025 76ccbe69aefad1bfb795b52145b3e6f0 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 6.5E-24 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12025 76ccbe69aefad1bfb795b52145b3e6f0 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12025 76ccbe69aefad1bfb795b52145b3e6f0 101 PANTHER PTHR19836 1 101 8.0E-59 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS08100 10a94a3633ab8b6bbe0ca40d0d76a1db 208 SUPERFAMILY SSF46689 4 76 3.49E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08100 10a94a3633ab8b6bbe0ca40d0d76a1db 208 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VCLMA_RS08100 10a94a3633ab8b6bbe0ca40d0d76a1db 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 3.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS08100 10a94a3633ab8b6bbe0ca40d0d76a1db 208 PANTHER PTHR30055 4 174 3.8E-51 T 22-04-2016 VCLMA_RS08100 10a94a3633ab8b6bbe0ca40d0d76a1db 208 Gene3D G3DSA:1.10.357.10 5 206 1.2E-39 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS08100 10a94a3633ab8b6bbe0ca40d0d76a1db 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.4E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS08100 10a94a3633ab8b6bbe0ca40d0d76a1db 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.4E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS08100 10a94a3633ab8b6bbe0ca40d0d76a1db 208 PANTHER PTHR30055:SF73 4 174 3.8E-51 T 22-04-2016 VCLMA_RS08100 10a94a3633ab8b6bbe0ca40d0d76a1db 208 SUPERFAMILY SSF48498 80 207 7.11E-43 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VCLMA_RS11030 6f952f928c53e3608a7df590d5777694 276 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 4 274 51.489 T 22-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VCLMA_RS11030 6f952f928c53e3608a7df590d5777694 276 PANTHER PTHR30535 22 270 4.4E-51 T 22-04-2016 VCLMA_RS11030 6f952f928c53e3608a7df590d5777694 276 SUPERFAMILY SSF53807 24 270 5.1E-58 T 22-04-2016 VCLMA_RS11030 6f952f928c53e3608a7df590d5777694 276 Pfam PF01497 Periplasmic binding protein 28 248 2.7E-29 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VCLMA_RS11030 6f952f928c53e3608a7df590d5777694 276 Gene3D G3DSA:3.40.50.1980 25 142 1.0E-27 T 22-04-2016 VCLMA_RS11030 6f952f928c53e3608a7df590d5777694 276 Gene3D G3DSA:3.40.50.1980 145 270 4.5E-38 T 22-04-2016 VCLMA_RS09280 245a49f44b61e1e0b4cd583836fd4741 267 Gene3D G3DSA:3.20.10.10 123 262 8.4E-43 T 22-04-2016 VCLMA_RS09280 245a49f44b61e1e0b4cd583836fd4741 267 Pfam PF01063 Amino-transferase class IV 24 247 4.0E-45 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VCLMA_RS09280 245a49f44b61e1e0b4cd583836fd4741 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 4.1E-107 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 VCLMA_RS09280 245a49f44b61e1e0b4cd583836fd4741 267 PANTHER PTHR11825:SF55 1 263 1.0E-94 T 22-04-2016 VCLMA_RS09280 245a49f44b61e1e0b4cd583836fd4741 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VCLMA_RS09280 245a49f44b61e1e0b4cd583836fd4741 267 SUPERFAMILY SSF56752 1 261 1.24E-70 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VCLMA_RS09280 245a49f44b61e1e0b4cd583836fd4741 267 Gene3D G3DSA:3.30.470.10 1 107 4.5E-31 T 22-04-2016 VCLMA_RS09280 245a49f44b61e1e0b4cd583836fd4741 267 PANTHER PTHR11825 1 263 1.0E-94 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 PANTHER PTHR30562 10 608 1.2E-291 T 22-04-2016 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 Gene3D G3DSA:3.40.1440.10 16 97 9.9E-13 T 22-04-2016 IPR027299 GIY-YIG domain VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 Gene3D G3DSA:4.10.860.10 183 243 3.3E-17 T 22-04-2016 IPR001943 UVR domain GO:0005515 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 1.4E-10 T 22-04-2016 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 2.4E-12 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 SMART SM00278 556 575 0.25 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 SMART SM00278 588 607 13.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.414 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 SUPERFAMILY SSF46600 190 243 1.44E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 Pfam PF02151 UvrB/uvrC motif 207 238 2.8E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 11 589 1.2E-212 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 SUPERFAMILY SSF82771 16 100 8.63E-24 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 SUPERFAMILY SSF47781 521 609 6.99E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 SMART SM00465 17 98 1.1E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 PANTHER PTHR30562:SF1 10 608 1.2E-291 T 22-04-2016 VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 2.9E-44 T 22-04-2016 IPR001162 UvrC family homology region VCLMA_RS05720 b1f91ac2cce111cfd13ee55a0321f42c 610 Gene3D G3DSA:1.10.150.20 555 609 6.4E-24 T 22-04-2016 VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 Pfam PF01389 OmpA-like transmembrane domain 20 172 2.0E-43 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 PRINTS PR01021 OMPA domain signature 242 257 5.5E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 PRINTS PR01021 OMPA domain signature 257 273 5.5E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 PRINTS PR01021 OMPA domain signature 212 234 5.5E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 ProSitePatterns PS01068 OmpA-like domain. 244 288 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 Gene3D G3DSA:2.40.160.20 6 190 2.6E-47 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 PANTHER PTHR30128:SF15 4 321 4.8E-212 T 22-04-2016 VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 Gene3D G3DSA:3.30.1330.60 200 312 7.2E-43 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 Pfam PF00691 OmpA family 211 306 1.7E-26 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 SUPERFAMILY SSF56925 19 172 4.97E-30 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 SUPERFAMILY SSF103088 184 312 2.35E-40 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS10275 a99a2347a59de81e35b8c11c9d5dac3c 321 PANTHER PTHR30128 4 321 4.8E-212 T 22-04-2016 VCLMA_RS02595 5e94202b3ff1a193fcf531886a21da31 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 280 4.5E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02595 5e94202b3ff1a193fcf531886a21da31 283 PANTHER PTHR30406:SF7 1 283 1.7E-211 T 22-04-2016 VCLMA_RS02595 5e94202b3ff1a193fcf531886a21da31 283 PANTHER PTHR30406 1 283 1.7E-211 T 22-04-2016 VCLMA_RS02595 5e94202b3ff1a193fcf531886a21da31 283 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 9 273 5.2E-102 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 VCLMA_RS02595 5e94202b3ff1a193fcf531886a21da31 283 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 278 2.7E-124 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 VCLMA_RS02595 5e94202b3ff1a193fcf531886a21da31 283 SUPERFAMILY SSF161098 22 272 2.62E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02595 5e94202b3ff1a193fcf531886a21da31 283 Gene3D G3DSA:1.10.3720.10 25 274 7.2E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 SUPERFAMILY SSF53686 5 290 2.75E-89 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 294 5.8E-126 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 283 3.7E-65 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 Gene3D G3DSA:3.40.50.1100 42 142 5.2E-39 T 22-04-2016 VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 Gene3D G3DSA:3.40.50.1100 4 41 2.4E-79 T 22-04-2016 VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 Gene3D G3DSA:3.40.50.1100 148 294 2.4E-79 T 22-04-2016 VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 PANTHER PTHR10314:SF100 1 294 4.4E-192 T 22-04-2016 VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 TIGRFAM TIGR01138 cysM: cysteine synthase B 6 294 4.2E-150 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VCLMA_RS02585 fbe21eda181dfca55f58c8adc617d653 295 PANTHER PTHR10314 1 294 4.4E-192 T 22-04-2016 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 SUPERFAMILY SSF47757 3 75 2.22E-15 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 SUPERFAMILY SSF53335 76 269 2.09E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 57 1.3E-10 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 Gene3D G3DSA:3.40.50.150 75 270 1.8E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 SMART SM00138 8 272 1.2E-132 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 PANTHER PTHR24422 1 275 1.4E-124 T 22-04-2016 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 6.8E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 6.8E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 6.8E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 6.8E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 6.8E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 6.8E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 PANTHER PTHR24422:SF9 1 275 1.4E-124 T 22-04-2016 VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 9.5E-68 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VCLMA_RS10215 e3b3b6d9b08738fe9335e8cf59733d53 275 Gene3D G3DSA:1.10.155.10 3 74 7.7E-16 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 Gene3D G3DSA:1.10.150.20 2 36 3.1E-6 T 22-04-2016 VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 SMART SM00487 264 458 2.9E-31 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 PANTHER PTHR24031:SF249 625 692 3.6E-127 T 22-04-2016 VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 PANTHER PTHR24031:SF249 161 281 3.6E-127 T 22-04-2016 VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 PANTHER PTHR24031:SF249 298 602 3.6E-127 T 22-04-2016 VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 PANTHER PTHR24031 625 692 3.6E-127 T 22-04-2016 VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 PANTHER PTHR24031 161 281 3.6E-127 T 22-04-2016 VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 PANTHER PTHR24031 298 602 3.6E-127 T 22-04-2016 VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 Gene3D G3DSA:3.40.50.300 255 452 1.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 Pfam PF17191 RecG wedge domain 14 171 3.5E-20 T 22-04-2016 IPR033454 RecG, wedge domain VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 Gene3D G3DSA:3.40.50.300 453 637 1.4E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 SMART SM00490 504 588 6.9E-23 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 Gene3D G3DSA:2.40.50.140 46 139 3.1E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 SUPERFAMILY SSF52540 451 653 2.66E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 SUPERFAMILY SSF52540 215 452 1.88E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 3.8E-237 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 SUPERFAMILY SSF50249 8 173 2.91E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 Pfam PF00271 Helicase conserved C-terminal domain 479 587 1.6E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS12625 0c7b3686bc963cf6147c4489dc7e0543 692 Pfam PF00270 DEAD/DEAH box helicase 271 432 3.1E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 Gene3D G3DSA:3.30.450.20 65 168 4.9E-28 T 22-04-2016 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 PANTHER PTHR32089:SF59 1 627 0.0 T 22-04-2016 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 SUPERFAMILY SSF103190 87 173 1.18E-10 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 SUPERFAMILY SSF58104 318 627 2.35E-77 T 22-04-2016 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 Pfam PF00672 HAMP domain 280 346 1.5E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 463 490 1.5E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 273 293 1.5E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 521 1.5E-21 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 SMART SM00283 365 626 9.8E-65 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 PANTHER PTHR32089 1 627 0.0 T 22-04-2016 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 SMART SM00304 353 403 7.8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 SMART SM00304 296 350 9.0E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 Gene3D G3DSA:1.10.287.950 380 597 1.0E-56 T 22-04-2016 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 Pfam PF02743 Cache domain 38 258 2.9E-28 T 22-04-2016 IPR033479 Double Cache domain 1 VCLMA_RS06085 fe218d303498b632079508da9e900fce 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 625 7.5E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS00145 3045386b1cda53116f5335417a1cd561 94 SUPERFAMILY SSF55021 3 75 6.41E-10 T 22-04-2016 VCLMA_RS00145 3045386b1cda53116f5335417a1cd561 94 Gene3D G3DSA:3.30.70.260 1 74 2.1E-12 T 22-04-2016 VCLMA_RS00145 3045386b1cda53116f5335417a1cd561 94 Pfam PF13710 ACT domain 12 73 4.3E-21 T 22-04-2016 VCLMA_RS00145 3045386b1cda53116f5335417a1cd561 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 7.0E-4 T 22-04-2016 VCLMA_RS17415 3689d60bd07e593318e1ce4cd6a99773 116 Pfam PF13737 Transposase DDE domain 3 59 3.5E-16 T 22-04-2016 IPR025668 Transposase DDE domain VCLMA_RS17415 3689d60bd07e593318e1ce4cd6a99773 116 PANTHER PTHR34631:SF2 3 83 9.4E-41 T 22-04-2016 VCLMA_RS17415 3689d60bd07e593318e1ce4cd6a99773 116 PANTHER PTHR34631 3 83 9.4E-41 T 22-04-2016 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 SUPERFAMILY SSF53720 2 449 1.83E-121 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 Gene3D G3DSA:3.40.605.10 3 256 1.8E-73 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 PANTHER PTHR11699 1 469 1.6E-303 T 22-04-2016 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 4.1E-223 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 Pfam PF00171 Aldehyde dehydrogenase family 9 453 9.6E-118 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 PANTHER PTHR11699:SF197 1 469 1.6E-303 T 22-04-2016 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 Gene3D G3DSA:3.40.309.10 257 442 2.7E-43 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VCLMA_RS12185 34a3ee544258d7b5f9380c396a74fe21 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.589 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 VCLMA_RS09100 6e133a578acddebe4b70bed704930eed 185 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 24 171 2.5E-50 T 22-04-2016 IPR023826 Rhomboid-like serine protease, proteobacteria VCLMA_RS09100 6e133a578acddebe4b70bed704930eed 185 PANTHER PTHR22936 1 178 1.7E-85 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VCLMA_RS09100 6e133a578acddebe4b70bed704930eed 185 Pfam PF01694 Rhomboid family 33 176 6.6E-14 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VCLMA_RS09100 6e133a578acddebe4b70bed704930eed 185 SUPERFAMILY SSF144091 3 173 1.83E-26 T 22-04-2016 VCLMA_RS09100 6e133a578acddebe4b70bed704930eed 185 PANTHER PTHR22936:SF18 1 178 1.7E-85 T 22-04-2016 VCLMA_RS09100 6e133a578acddebe4b70bed704930eed 185 Gene3D G3DSA:1.20.1540.10 3 174 5.9E-17 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.6E-70 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.56E-32 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 1.56E-32 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 1.56E-32 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 1.56E-32 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 SUPERFAMILY SSF56655 1 259 2.49E-84 T 22-04-2016 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 Gene3D G3DSA:3.40.190.80 152 259 7.2E-39 T 22-04-2016 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 Gene3D G3DSA:3.30.540.10 2 151 5.2E-52 T 22-04-2016 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.09E-58 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.09E-58 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.09E-58 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.09E-58 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.09E-58 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.09E-58 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PANTHER PTHR20854 1 260 9.8E-105 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS03615 5ba775791c4a040a9678628dc60047a4 267 PANTHER PTHR20854:SF4 1 260 9.8E-105 T 22-04-2016 VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 Pfam PF01261 Xylose isomerase-like TIM barrel 23 241 9.0E-41 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 Hamap MF_00152 Probable endonuclease 4 [nfo]. 4 281 42.003 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 217 233 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 177 184 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 PANTHER PTHR21445 4 284 2.6E-159 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 279 1.0E-105 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 PANTHER PTHR21445:SF0 4 284 2.6E-159 T 22-04-2016 VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 71 79 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 Gene3D G3DSA:3.20.20.150 4 280 6.6E-120 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 SMART SM00518 5 281 6.6E-119 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VCLMA_RS10935 211049a95e9847a3d71d1d913f1398e5 286 SUPERFAMILY SSF51658 5 280 5.37E-99 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.523 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 SUPERFAMILY SSF54211 80 159 6.57E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 SUPERFAMILY SSF54768 8 76 1.36E-23 T 22-04-2016 VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 Gene3D G3DSA:3.30.160.20 10 73 1.8E-30 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 7.0E-29 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 Gene3D G3DSA:3.30.230.10 78 159 1.1E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 9.5E-69 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 PANTHER PTHR13718 10 163 2.1E-78 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12005 90365e36d6492479be76ae081424fd93 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 1.6E-29 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VCLMA_RS03770 d490be4844398e7dcd004fe6d994ef54 319 Gene3D G3DSA:3.40.50.1980 151 308 5.0E-17 T 22-04-2016 VCLMA_RS03770 d490be4844398e7dcd004fe6d994ef54 319 PANTHER PTHR30532 1 319 1.9E-175 T 22-04-2016 VCLMA_RS03770 d490be4844398e7dcd004fe6d994ef54 319 SUPERFAMILY SSF53807 27 291 4.71E-37 T 22-04-2016 VCLMA_RS03770 d490be4844398e7dcd004fe6d994ef54 319 Pfam PF01497 Periplasmic binding protein 49 287 1.0E-21 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VCLMA_RS03770 d490be4844398e7dcd004fe6d994ef54 319 Gene3D G3DSA:3.40.50.1980 27 150 5.2E-19 T 22-04-2016 VCLMA_RS03770 d490be4844398e7dcd004fe6d994ef54 319 PANTHER PTHR30532:SF2 1 319 1.9E-175 T 22-04-2016 VCLMA_RS04165 0b4d2ec53dddcb6e425c030057f2d63c 294 SUPERFAMILY SSF48576 3 288 5.44E-86 T 22-04-2016 IPR008949 Isoprenoid synthase domain VCLMA_RS04165 0b4d2ec53dddcb6e425c030057f2d63c 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VCLMA_RS04165 0b4d2ec53dddcb6e425c030057f2d63c 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VCLMA_RS04165 0b4d2ec53dddcb6e425c030057f2d63c 294 PANTHER PTHR12001:SF23 1 273 1.3E-104 T 22-04-2016 VCLMA_RS04165 0b4d2ec53dddcb6e425c030057f2d63c 294 PANTHER PTHR12001 1 273 1.3E-104 T 22-04-2016 IPR017446 Polyprenyl synthetase-related VCLMA_RS04165 0b4d2ec53dddcb6e425c030057f2d63c 294 Gene3D G3DSA:1.10.600.10 3 293 2.5E-90 T 22-04-2016 IPR008949 Isoprenoid synthase domain VCLMA_RS04165 0b4d2ec53dddcb6e425c030057f2d63c 294 Pfam PF00348 Polyprenyl synthetase 31 268 9.7E-57 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 SUPERFAMILY SSF51735 3 270 2.6E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 4.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 4.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 Pfam PF00106 short chain dehydrogenase 3 187 2.3E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 PANTHER PTHR24322 146 178 9.8E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 PANTHER PTHR24322 7 130 9.8E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 PANTHER PTHR24322:SF463 146 178 9.8E-56 T 22-04-2016 VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 PANTHER PTHR24322:SF463 7 130 9.8E-56 T 22-04-2016 VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 Gene3D G3DSA:3.40.50.720 3 271 7.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04575 74162124a577e33b1992b1100b8a8466 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VCLMA_RS10840 0b2f4ae9ed872d99070467c0b6639ff4 384 Pfam PF13487 HD domain 244 313 1.0E-12 T 22-04-2016 VCLMA_RS10840 0b2f4ae9ed872d99070467c0b6639ff4 384 Gene3D G3DSA:3.30.450.40 18 155 9.5E-7 T 22-04-2016 IPR029016 GAF domain-like VCLMA_RS10840 0b2f4ae9ed872d99070467c0b6639ff4 384 Gene3D G3DSA:1.10.3210.10 166 350 1.9E-12 T 22-04-2016 IPR006674 HD domain VCLMA_RS10840 0b2f4ae9ed872d99070467c0b6639ff4 384 SUPERFAMILY SSF55781 32 150 1.18E-8 T 22-04-2016 IPR029016 GAF domain-like VCLMA_RS10840 0b2f4ae9ed872d99070467c0b6639ff4 384 SUPERFAMILY SSF109604 169 361 1.0E-22 T 22-04-2016 VCLMA_RS09085 6a621640117827955f52dee1e62c959b 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 46.534 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VCLMA_RS09085 6a621640117827955f52dee1e62c959b 194 PANTHER PTHR11845 4 190 1.8E-34 T 22-04-2016 VCLMA_RS09085 6a621640117827955f52dee1e62c959b 194 Pfam PF13023 HD domain 11 166 4.1E-16 T 22-04-2016 IPR006674 HD domain VCLMA_RS09085 6a621640117827955f52dee1e62c959b 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 184 2.0E-38 T 22-04-2016 VCLMA_RS09085 6a621640117827955f52dee1e62c959b 194 Gene3D G3DSA:1.10.3210.10 3 193 2.8E-46 T 22-04-2016 IPR006674 HD domain VCLMA_RS09085 6a621640117827955f52dee1e62c959b 194 SMART SM00471 26 151 2.8E-8 T 22-04-2016 IPR003607 HD/PDEase domain VCLMA_RS09085 6a621640117827955f52dee1e62c959b 194 SUPERFAMILY SSF109604 4 185 6.85E-43 T 22-04-2016 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 SUPERFAMILY SSF46609 1 86 1.7E-29 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 85 6.9E-26 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 PANTHER PTHR11404 6 201 3.9E-97 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 SUPERFAMILY SSF54719 87 201 1.7E-44 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 92 195 5.7E-41 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 163 170 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 Gene3D G3DSA:1.10.287.990 20 85 4.0E-21 T 22-04-2016 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 PIRSF PIRSF000349 1 205 1.2E-80 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 161 173 2.1E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 2.1E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 2.1E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.1E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS12540 9955ae6466db69cca848c813f0456a06 205 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.1E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS04240 1959002e481ffbe34aa2801fd4dad915 269 PANTHER PTHR30429 3 269 1.8E-147 T 22-04-2016 IPR004872 Lipoprotein NlpA family VCLMA_RS04240 1959002e481ffbe34aa2801fd4dad915 269 PIRSF PIRSF002854 1 269 1.8E-100 T 22-04-2016 IPR004872 Lipoprotein NlpA family VCLMA_RS04240 1959002e481ffbe34aa2801fd4dad915 269 PANTHER PTHR30429:SF1 3 269 1.8E-147 T 22-04-2016 VCLMA_RS04240 1959002e481ffbe34aa2801fd4dad915 269 Gene3D G3DSA:3.40.190.10 30 162 3.9E-58 T 22-04-2016 VCLMA_RS04240 1959002e481ffbe34aa2801fd4dad915 269 SUPERFAMILY SSF53850 32 269 6.29E-80 T 22-04-2016 VCLMA_RS04240 1959002e481ffbe34aa2801fd4dad915 269 Pfam PF03180 NLPA lipoprotein 33 269 1.3E-98 T 22-04-2016 IPR004872 Lipoprotein NlpA family VCLMA_RS04240 1959002e481ffbe34aa2801fd4dad915 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 6.9E-125 T 22-04-2016 IPR004872 Lipoprotein NlpA family VCLMA_RS01805 c9150fe9fad7738e86b58cf60b971b2b 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.4E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain VCLMA_RS01805 c9150fe9fad7738e86b58cf60b971b2b 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.566 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VCLMA_RS01805 c9150fe9fad7738e86b58cf60b971b2b 156 PIRSF PIRSF002122 3 156 7.4E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VCLMA_RS01805 c9150fe9fad7738e86b58cf60b971b2b 156 PANTHER PTHR11205 1 156 2.7E-93 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 VCLMA_RS01805 c9150fe9fad7738e86b58cf60b971b2b 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 VCLMA_RS01805 c9150fe9fad7738e86b58cf60b971b2b 156 Gene3D G3DSA:1.10.455.10 8 156 1.9E-68 T 22-04-2016 IPR023798 Ribosomal protein S7 domain VCLMA_RS01805 c9150fe9fad7738e86b58cf60b971b2b 156 SUPERFAMILY SSF47973 6 149 8.24E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain VCLMA_RS01805 c9150fe9fad7738e86b58cf60b971b2b 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 9.5E-71 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:3.40.50.720 311 498 1.9E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 PANTHER PTHR23309 8 719 0.0 T 22-04-2016 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:1.10.1040.10 499 593 3.8E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 53.442 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 PANTHER PTHR23309:SF18 8 719 0.0 T 22-04-2016 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF48179 624 715 1.02E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 208 1.6E-39 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 711 2.5E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 3.7E-26 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 3.1E-58 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:3.90.226.10 235 296 1.6E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:3.90.226.10 4 201 1.6E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 Gene3D G3DSA:1.10.1040.10 633 717 6.1E-21 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF48179 496 604 6.29E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF51735 313 496 5.01E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS12915 70e381acf734b0d14da3ac5401946adb 723 SUPERFAMILY SSF52096 2 305 9.95E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS17265 d3a28b3cb504754ea3753be4547daf0a 99 Gene3D G3DSA:3.40.710.10 2 97 1.1E-28 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS17265 d3a28b3cb504754ea3753be4547daf0a 99 PANTHER PTHR30627 1 99 4.4E-45 T 22-04-2016 VCLMA_RS17265 d3a28b3cb504754ea3753be4547daf0a 99 PANTHER PTHR30627:SF2 1 99 4.4E-45 T 22-04-2016 VCLMA_RS17265 d3a28b3cb504754ea3753be4547daf0a 99 Pfam PF00905 Penicillin binding protein transpeptidase domain 2 97 3.2E-21 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VCLMA_RS17265 d3a28b3cb504754ea3753be4547daf0a 99 SUPERFAMILY SSF56601 3 98 8.35E-28 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS05760 437446d1af7ef6b9e6e0a8ca84c96844 327 SUPERFAMILY SSF46589 13 99 1.31E-22 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VCLMA_RS05760 437446d1af7ef6b9e6e0a8ca84c96844 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 327 4.5E-114 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VCLMA_RS05760 437446d1af7ef6b9e6e0a8ca84c96844 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.551 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VCLMA_RS05760 437446d1af7ef6b9e6e0a8ca84c96844 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 4.7E-25 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VCLMA_RS05760 437446d1af7ef6b9e6e0a8ca84c96844 327 Gene3D G3DSA:3.30.930.10 10 327 5.1E-135 T 22-04-2016 VCLMA_RS05760 437446d1af7ef6b9e6e0a8ca84c96844 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 7.2E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VCLMA_RS05760 437446d1af7ef6b9e6e0a8ca84c96844 327 PANTHER PTHR11538 92 327 7.5E-118 T 22-04-2016 VCLMA_RS05760 437446d1af7ef6b9e6e0a8ca84c96844 327 SUPERFAMILY SSF55681 92 327 1.75E-82 T 22-04-2016 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 SMART SM00028 69 102 0.47 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 SMART SM00028 35 68 0.17 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 SMART SM00028 139 172 9.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 SMART SM00028 103 136 9.6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 PANTHER PTHR23083 25 189 2.1E-24 T 22-04-2016 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 SUPERFAMILY SSF48452 26 172 5.31E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 Gene3D G3DSA:1.25.40.10 26 193 8.7E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 Pfam PF13424 Tetratricopeptide repeat 104 169 2.7E-9 T 22-04-2016 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 235 1.5E-78 T 22-04-2016 IPR013360 Pilus biogenesis/stability type IV, PilW VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 SMART SM00386 49 81 350.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 SMART SM00386 83 115 66.0 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 VCLMA_RS07495 d0aa4aa4b0a111a7cbb44776b9198a26 237 SMART SM00386 153 185 5.5 T 22-04-2016 IPR003107 HAT (Half-A-TPR) repeat GO:0006396 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PANTHER PTHR11405 297 334 5.7E-211 T 22-04-2016 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PANTHER PTHR11405 1 277 5.7E-211 T 22-04-2016 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.001 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 4.8E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.8E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 4.8E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.8E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.8E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 330 3.9E-56 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 SUPERFAMILY SSF53671 4 333 2.49E-99 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 7.5E-134 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.8E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 1.8E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.8E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.8E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 Gene3D G3DSA:3.40.50.1370 144 319 3.4E-75 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.2E-45 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PANTHER PTHR11405:SF44 297 334 5.7E-211 T 22-04-2016 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 PANTHER PTHR11405:SF44 1 277 5.7E-211 T 22-04-2016 VCLMA_RS11670 4de97892bb1840b0147ac80e3eb508eb 334 Gene3D G3DSA:3.40.50.1370 5 143 4.5E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS02690 42363a79989d3a73b9971b42d44167c5 86 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 86 34.294 T 22-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS02690 42363a79989d3a73b9971b42d44167c5 86 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 79 7.9E-20 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS02690 42363a79989d3a73b9971b42d44167c5 86 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 5 83 7.0E-26 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 Pfam PF03023 MviN-like protein 30 478 1.0E-143 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PIRSF PIRSF002869 1 518 1.4E-150 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 3.1E-137 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 366 385 4.1E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 54 70 4.1E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 166 187 4.1E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 35 54 4.1E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 142 166 4.1E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 268 294 4.1E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PRINTS PR01806 Virulence factor MviN signature 418 435 4.1E-77 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PANTHER PTHR11206 69 84 8.8E-106 T 22-04-2016 VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PANTHER PTHR11206 226 507 8.8E-106 T 22-04-2016 VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PANTHER PTHR11206:SF90 69 84 8.8E-106 T 22-04-2016 VCLMA_RS03315 a0c1335a81eeb8c175ebf6750c122c7c 520 PANTHER PTHR11206:SF90 226 507 8.8E-106 T 22-04-2016 VCLMA_RS00670 1a5afbb070f10d7cc0e39d4e1fe3c2d3 338 Pfam PF12146 Serine aminopeptidase, S33 53 310 2.7E-66 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 VCLMA_RS00670 1a5afbb070f10d7cc0e39d4e1fe3c2d3 338 PANTHER PTHR11614 12 325 2.5E-160 T 22-04-2016 VCLMA_RS00670 1a5afbb070f10d7cc0e39d4e1fe3c2d3 338 PANTHER PTHR11614:SF100 12 325 2.5E-160 T 22-04-2016 VCLMA_RS00670 1a5afbb070f10d7cc0e39d4e1fe3c2d3 338 Gene3D G3DSA:3.40.50.1820 28 325 2.4E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS00670 1a5afbb070f10d7cc0e39d4e1fe3c2d3 338 SUPERFAMILY SSF53474 35 323 1.29E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 PRINTS PR00095 Anthranilate synthase component I signature 296 309 1.2E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 PRINTS PR00095 Anthranilate synthase component I signature 310 323 1.2E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 PRINTS PR00095 Anthranilate synthase component I signature 405 419 1.2E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 PRINTS PR00095 Anthranilate synthase component I signature 390 404 1.2E-16 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 SUPERFAMILY SSF56322 10 457 1.23E-141 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 110 450 1.4E-120 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 Gene3D G3DSA:3.60.120.10 6 457 7.3E-149 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 PANTHER PTHR11236:SF18 1 457 2.8E-166 T 22-04-2016 VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 PANTHER PTHR11236 1 457 2.8E-166 T 22-04-2016 VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 Pfam PF00425 chorismate binding enzyme 196 448 5.5E-93 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VCLMA_RS06150 a8690be0bb15f81a44c620e33b61d8bf 458 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 156 1.0E-28 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 114 129 1.2E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 131 149 1.2E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 86 104 1.2E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 65 85 1.2E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 235 2.0E-94 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 SUPERFAMILY SSF82051 2 60 1.11E-12 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 Pfam PF01926 50S ribosome-binding GTPase 65 187 5.2E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 PANTHER PTHR11702:SF3 4 275 3.0E-121 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 SUPERFAMILY SSF52540 55 241 5.79E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 Gene3D G3DSA:3.40.50.300 63 246 3.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 Gene3D G3DSA:2.70.210.12 2 59 2.0E-12 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 PANTHER PTHR11702 4 275 3.0E-121 T 22-04-2016 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 ProSitePatterns PS00905 GTP1/OBG family signature. 116 129 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 Pfam PF01018 GTP1/OBG 3 59 1.1E-12 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VCLMA_RS15175 00c7aded6064d21725cd913348f98efa 276 PIRSF PIRSF002401 1 274 4.4E-90 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VCLMA_RS14615 425014826dd78f63d36629e579facb4a 290 Pfam PF04560 RNA polymerase Rpb2, domain 7 269 290 4.4E-9 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14615 425014826dd78f63d36629e579facb4a 290 Gene3D G3DSA:2.40.270.10 55 245 5.8E-70 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14615 425014826dd78f63d36629e579facb4a 290 PANTHER PTHR20856:SF20 185 290 3.7E-147 T 22-04-2016 VCLMA_RS14615 425014826dd78f63d36629e579facb4a 290 ProSitePatterns PS01166 RNA polymerases beta chain signature. 67 79 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14615 425014826dd78f63d36629e579facb4a 290 Pfam PF00562 RNA polymerase Rpb2, domain 6 39 267 3.5E-81 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14615 425014826dd78f63d36629e579facb4a 290 PANTHER PTHR20856:SF20 39 132 3.7E-147 T 22-04-2016 VCLMA_RS14615 425014826dd78f63d36629e579facb4a 290 SUPERFAMILY SSF64484 43 290 1.86E-102 T 22-04-2016 VCLMA_RS14615 425014826dd78f63d36629e579facb4a 290 PANTHER PTHR20856 185 290 3.7E-147 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14615 425014826dd78f63d36629e579facb4a 290 PANTHER PTHR20856 39 132 3.7E-147 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS02290 5de476fed1ed0a7f8a30d9790ae86ab7 239 Pfam PF02390 Putative methyltransferase 62 232 2.1E-59 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VCLMA_RS02290 5de476fed1ed0a7f8a30d9790ae86ab7 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.64 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VCLMA_RS02290 5de476fed1ed0a7f8a30d9790ae86ab7 239 PANTHER PTHR23417:SF14 4 237 2.5E-88 T 22-04-2016 VCLMA_RS02290 5de476fed1ed0a7f8a30d9790ae86ab7 239 Gene3D G3DSA:3.40.50.150 61 196 1.8E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS02290 5de476fed1ed0a7f8a30d9790ae86ab7 239 PANTHER PTHR23417 4 237 2.5E-88 T 22-04-2016 VCLMA_RS02290 5de476fed1ed0a7f8a30d9790ae86ab7 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 4.5E-68 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 VCLMA_RS02290 5de476fed1ed0a7f8a30d9790ae86ab7 239 SUPERFAMILY SSF53335 15 236 3.58E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS11210 00c3459c510f0167eda2ecdb104c84ed 181 PANTHER PTHR30417:SF4 1 179 2.2E-91 T 22-04-2016 VCLMA_RS11210 00c3459c510f0167eda2ecdb104c84ed 181 SMART SM00644 16 167 5.4E-58 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VCLMA_RS11210 00c3459c510f0167eda2ecdb104c84ed 181 SUPERFAMILY SSF55846 2 179 2.09E-65 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VCLMA_RS11210 00c3459c510f0167eda2ecdb104c84ed 181 PANTHER PTHR30417 1 179 2.2E-91 T 22-04-2016 VCLMA_RS11210 00c3459c510f0167eda2ecdb104c84ed 181 Gene3D G3DSA:3.40.80.10 4 179 2.1E-65 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VCLMA_RS11210 00c3459c510f0167eda2ecdb104c84ed 181 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 57 167 5.9E-21 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 Gene3D G3DSA:1.10.240.10 209 328 1.5E-18 T 22-04-2016 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 PANTHER PTHR10055:SF10 2 338 1.3E-178 T 22-04-2016 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 Gene3D G3DSA:3.40.50.620 4 208 5.9E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 2.6E-107 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 SUPERFAMILY SSF52374 5 334 1.97E-91 T 22-04-2016 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.421 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 4.0E-77 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 PANTHER PTHR10055 2 338 1.3E-178 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VCLMA_RS12220 d3d533e05bc96e6b1f4c9b083e80d647 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 5.1E-26 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 VCLMA_RS08970 20c818f7ed3ef65b2b8df9e7dd000d0b 401 PANTHER PTHR10590 3 398 1.4E-195 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS08970 20c818f7ed3ef65b2b8df9e7dd000d0b 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 191 398 1.1E-72 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS08970 20c818f7ed3ef65b2b8df9e7dd000d0b 401 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 397 2.6E-138 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS08970 20c818f7ed3ef65b2b8df9e7dd000d0b 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 1.9E-24 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS08970 20c818f7ed3ef65b2b8df9e7dd000d0b 401 Pfam PF07670 Nucleoside recognition 89 184 1.6E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS06920 6b122bba728307e95b893d8aa8fece42 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 9.1E-28 T 22-04-2016 IPR021363 Protein of unknown function DUF2835 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 1.2E-41 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 SUPERFAMILY SSF46785 3 76 3.54E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 145 2.8E-20 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 SUPERFAMILY SSF55252 82 151 1.57E-18 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 6.0E-23 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 Gene3D G3DSA:3.30.1360.40 80 154 2.2E-24 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 PANTHER PTHR34471 2 156 1.7E-65 T 22-04-2016 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 PANTHER PTHR34471:SF1 2 156 1.7E-65 T 22-04-2016 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 145 2.0E-21 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 Gene3D G3DSA:1.10.10.10 2 77 2.4E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.6E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 2.6E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 2.6E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 2.6E-23 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VCLMA_RS02170 b4206259d854bae2c6a8fb02742c90d6 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.17 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 VCLMA_RS10990 68c12b3c71768a7b038af4264f563884 312 Gene3D G3DSA:3.80.30.20 22 252 7.0E-33 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VCLMA_RS10990 68c12b3c71768a7b038af4264f563884 312 SMART SM00729 23 247 3.3E-41 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VCLMA_RS10990 68c12b3c71768a7b038af4264f563884 312 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 300 3.7E-144 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 VCLMA_RS10990 68c12b3c71768a7b038af4264f563884 312 Pfam PF16199 Radical_SAM C-terminal domain 209 291 1.2E-19 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension VCLMA_RS10990 68c12b3c71768a7b038af4264f563884 312 PANTHER PTHR11135 1 290 1.8E-150 T 22-04-2016 VCLMA_RS10990 68c12b3c71768a7b038af4264f563884 312 PANTHER PTHR11135:SF1 1 290 1.8E-150 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 VCLMA_RS10990 68c12b3c71768a7b038af4264f563884 312 Pfam PF04055 Radical SAM superfamily 43 201 1.4E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS10990 68c12b3c71768a7b038af4264f563884 312 SUPERFAMILY SSF102114 13 268 6.02E-47 T 22-04-2016 VCLMA_RS00165 84185bee22b2367c54b530ed09b1d42b 200 PANTHER PTHR35891:SF2 1 200 2.8E-90 T 22-04-2016 VCLMA_RS00165 84185bee22b2367c54b530ed09b1d42b 200 Pfam PF01323 DSBA-like thioredoxin domain 41 187 8.8E-30 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 VCLMA_RS00165 84185bee22b2367c54b530ed09b1d42b 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VCLMA_RS00165 84185bee22b2367c54b530ed09b1d42b 200 Gene3D G3DSA:3.40.30.10 119 199 3.9E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS00165 84185bee22b2367c54b530ed09b1d42b 200 Gene3D G3DSA:3.40.30.10 1 116 5.4E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS00165 84185bee22b2367c54b530ed09b1d42b 200 SUPERFAMILY SSF52833 20 197 4.11E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS00165 84185bee22b2367c54b530ed09b1d42b 200 PANTHER PTHR35891 1 200 2.8E-90 T 22-04-2016 VCLMA_RS00165 84185bee22b2367c54b530ed09b1d42b 200 PIRSF PIRSF001488 1 200 2.4E-75 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 SUPERFAMILY SSF55874 322 443 9.82E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 PANTHER PTHR24421:SF1 104 446 8.4E-90 T 22-04-2016 VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 PIRSF PIRSF037314 1 450 1.2E-189 T 22-04-2016 IPR017171 Signal transduction histidine kinase, MctS VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 Gene3D G3DSA:3.30.565.10 290 316 4.4E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 Gene3D G3DSA:3.30.565.10 351 445 4.4E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 Gene3D G3DSA:3.30.450.20 34 184 1.4E-51 T 22-04-2016 VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 SMART SM00387 353 447 2.5E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 1.4E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 Pfam PF07730 Histidine kinase 250 315 7.2E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 Pfam PF17200 Single Cache domain 2 45 192 3.3E-44 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 PANTHER PTHR24421 104 446 8.4E-90 T 22-04-2016 VCLMA_RS06020 53ed5b0f0ec040b7f1a79c5882af59f0 451 SMART SM01049 42 133 3.9E-34 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 582 4.3E-248 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 SUPERFAMILY SSF90123 14 327 1.83E-74 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 Pfam PF00664 ABC transporter transmembrane region 28 293 1.9E-56 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 Gene3D G3DSA:3.40.50.300 342 574 1.1E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 Gene3D G3DSA:1.20.1560.10 13 325 9.4E-74 T 22-04-2016 VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 SMART SM00382 368 561 1.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 PANTHER PTHR24221:SF188 6 582 0.0 T 22-04-2016 VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 PANTHER PTHR24221 6 582 0.0 T 22-04-2016 VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 SUPERFAMILY SSF52540 331 580 2.21E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS08625 b1721617d9799080b11c95923d53a54e 582 Pfam PF00005 ABC transporter 359 509 1.8E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS10710 e8c8b0ce35995bfebaf8b5a5e681ac12 296 PANTHER PTHR21708:SF24 1 291 2.3E-86 T 22-04-2016 VCLMA_RS10710 e8c8b0ce35995bfebaf8b5a5e681ac12 296 Gene3D G3DSA:1.10.1040.10 174 291 8.4E-47 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VCLMA_RS10710 e8c8b0ce35995bfebaf8b5a5e681ac12 296 PANTHER PTHR21708 1 291 2.3E-86 T 22-04-2016 VCLMA_RS10710 e8c8b0ce35995bfebaf8b5a5e681ac12 296 SUPERFAMILY SSF51735 1 165 5.77E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS10710 e8c8b0ce35995bfebaf8b5a5e681ac12 296 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 290 7.1E-39 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS10710 e8c8b0ce35995bfebaf8b5a5e681ac12 296 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.1E-30 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS10710 e8c8b0ce35995bfebaf8b5a5e681ac12 296 Gene3D G3DSA:3.40.50.720 1 173 2.5E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS10710 e8c8b0ce35995bfebaf8b5a5e681ac12 296 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 4.6E-94 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS10710 e8c8b0ce35995bfebaf8b5a5e681ac12 296 SUPERFAMILY SSF48179 168 290 1.22E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS08910 d7ab4cf5424c18b5b62635b0c020c889 206 PANTHER PTHR30086 1 206 4.2E-155 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS08910 d7ab4cf5424c18b5b62635b0c020c889 206 PANTHER PTHR30086:SF5 1 206 4.2E-155 T 22-04-2016 VCLMA_RS08910 d7ab4cf5424c18b5b62635b0c020c889 206 PIRSF PIRSF006324 1 206 5.7E-43 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS08910 d7ab4cf5424c18b5b62635b0c020c889 206 Pfam PF01810 LysE type translocator 15 203 8.3E-26 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS12630 48c10bbc072b7aba5c70638044f7fd88 468 PANTHER PTHR11119:SF44 3 467 2.4E-272 T 22-04-2016 VCLMA_RS12630 48c10bbc072b7aba5c70638044f7fd88 468 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 445 4.3E-127 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VCLMA_RS12630 48c10bbc072b7aba5c70638044f7fd88 468 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 VCLMA_RS12630 48c10bbc072b7aba5c70638044f7fd88 468 TIGRFAM TIGR03173 pbuX: xanthine permease 28 447 4.3E-131 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 VCLMA_RS12630 48c10bbc072b7aba5c70638044f7fd88 468 PANTHER PTHR11119 3 467 2.4E-272 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VCLMA_RS12630 48c10bbc072b7aba5c70638044f7fd88 468 Pfam PF00860 Permease family 23 415 6.4E-98 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VCLMA_RS03970 816f06c70461a3de0b197e440853a2c6 161 PANTHER PTHR30308 2 161 9.8E-81 T 22-04-2016 VCLMA_RS03970 816f06c70461a3de0b197e440853a2c6 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 2.8E-53 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VCLMA_RS03970 816f06c70461a3de0b197e440853a2c6 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site VCLMA_RS03970 816f06c70461a3de0b197e440853a2c6 161 SUPERFAMILY SSF74982 9 139 6.8E-49 T 22-04-2016 IPR023620 Small protein B VCLMA_RS03970 816f06c70461a3de0b197e440853a2c6 161 Pfam PF01668 SmpB protein 14 77 3.4E-29 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VCLMA_RS03970 816f06c70461a3de0b197e440853a2c6 161 Gene3D G3DSA:2.40.280.10 14 134 2.7E-48 T 22-04-2016 IPR023620 Small protein B VCLMA_RS03970 816f06c70461a3de0b197e440853a2c6 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 71.106 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VCLMA_RS03970 816f06c70461a3de0b197e440853a2c6 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 3.0E-61 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 VCLMA_RS03970 816f06c70461a3de0b197e440853a2c6 161 PANTHER PTHR30308:SF2 2 161 9.8E-81 T 22-04-2016 VCLMA_RS01175 404b6807924eee774824d9913a9117db 367 Gene3D G3DSA:3.40.640.10 1 241 4.7E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS01175 404b6807924eee774824d9913a9117db 367 SUPERFAMILY SSF53383 2 365 7.8E-116 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS01175 404b6807924eee774824d9913a9117db 367 PANTHER PTHR30244 1 367 1.4E-189 T 22-04-2016 VCLMA_RS01175 404b6807924eee774824d9913a9117db 367 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 360 2.6E-131 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VCLMA_RS01175 404b6807924eee774824d9913a9117db 367 PIRSF PIRSF000390 1 366 1.8E-114 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VCLMA_RS01175 404b6807924eee774824d9913a9117db 367 PANTHER PTHR30244:SF16 1 367 1.4E-189 T 22-04-2016 VCLMA_RS01175 404b6807924eee774824d9913a9117db 367 Gene3D G3DSA:3.90.1150.10 243 365 1.2E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS03265 361def681d81b4c8fca865c34b0169d5 221 Pfam PF02976 DNA mismatch repair enzyme MutH 53 151 1.4E-33 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VCLMA_RS03265 361def681d81b4c8fca865c34b0169d5 221 Gene3D G3DSA:3.40.600.10 4 220 3.1E-81 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VCLMA_RS03265 361def681d81b4c8fca865c34b0169d5 221 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 5 219 1.3E-101 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VCLMA_RS03265 361def681d81b4c8fca865c34b0169d5 221 SUPERFAMILY SSF52980 3 220 2.68E-82 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VCLMA_RS03265 361def681d81b4c8fca865c34b0169d5 221 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 221 149.759 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VCLMA_RS03265 361def681d81b4c8fca865c34b0169d5 221 SMART SM00927 53 151 1.0E-65 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 Gene3D G3DSA:3.40.640.10 45 315 7.2E-104 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 PANTHER PTHR11879 1 396 1.6E-269 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 9.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 9.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 9.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 9.4E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 Pfam PF00155 Aminotransferase class I and II 26 392 9.2E-80 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 PANTHER PTHR11879:SF11 1 396 1.6E-269 T 22-04-2016 VCLMA_RS06100 c8660b7f1b7145b4b4c180d40df18442 396 SUPERFAMILY SSF53383 1 391 1.73E-109 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS06050 189c9af03dff238528a55c5a29aa3336 443 PANTHER PTHR33989:SF4 3 443 4.4E-195 T 22-04-2016 VCLMA_RS06050 189c9af03dff238528a55c5a29aa3336 443 PIRSF PIRSF006351 4 435 9.4E-147 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VCLMA_RS06050 189c9af03dff238528a55c5a29aa3336 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 425 7.5E-113 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VCLMA_RS06050 189c9af03dff238528a55c5a29aa3336 443 PANTHER PTHR33989 3 443 4.4E-195 T 22-04-2016 VCLMA_RS06050 189c9af03dff238528a55c5a29aa3336 443 Pfam PF02378 Phosphotransferase system, EIIC 32 351 1.7E-66 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF03764 Elongation factor G, domain IV 476 594 6.5E-44 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF14492 Elongation Factor G, domain II 401 474 7.6E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PANTHER PTHR23115:SF154 301 688 0.0 T 22-04-2016 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PANTHER PTHR23115:SF154 7 174 0.0 T 22-04-2016 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PANTHER PTHR23115:SF154 251 279 0.0 T 22-04-2016 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF52540 4 278 3.23E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:3.40.50.300 3 283 9.3E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF00009 Elongation factor Tu GTP binding domain 7 278 1.4E-60 T 22-04-2016 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:3.30.230.10 481 596 1.2E-44 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 SMART SM00838 597 684 2.6E-47 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF00679 Elongation factor G C-terminus 597 683 1.2E-28 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 174 5.6E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 689 1.2E-296 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF54980 600 689 2.48E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF54211 476 596 8.34E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 SMART SM00889 477 595 2.6E-60 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF54980 401 478 1.8E-20 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:2.40.30.10 304 401 6.2E-36 T 22-04-2016 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.537 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PANTHER PTHR23115 301 688 0.0 T 22-04-2016 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PANTHER PTHR23115 7 174 0.0 T 22-04-2016 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 PANTHER PTHR23115 251 279 0.0 T 22-04-2016 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 SUPERFAMILY SSF50447 261 399 9.06E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:3.30.70.240 597 682 3.7E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 6.6E-18 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 Gene3D G3DSA:3.30.70.870 402 477 1.9E-31 T 22-04-2016 VCLMA_RS10850 701e2f2befba70467f3cc707a4ec5a14 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VCLMA_RS02125 e70068794ec2c10728064a0f088deaf9 275 Gene3D G3DSA:3.60.110.10 3 266 5.1E-82 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VCLMA_RS02125 e70068794ec2c10728064a0f088deaf9 275 Pfam PF00795 Carbon-nitrogen hydrolase 3 256 1.8E-50 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VCLMA_RS02125 e70068794ec2c10728064a0f088deaf9 275 PANTHER PTHR23088 3 274 1.5E-109 T 22-04-2016 VCLMA_RS02125 e70068794ec2c10728064a0f088deaf9 275 PANTHER PTHR23088:SF27 3 274 1.5E-109 T 22-04-2016 VCLMA_RS02125 e70068794ec2c10728064a0f088deaf9 275 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site VCLMA_RS02125 e70068794ec2c10728064a0f088deaf9 275 SUPERFAMILY SSF56317 3 263 7.33E-78 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 SUPERFAMILY SSF47413 1 60 5.34E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 PANTHER PTHR30146 1 332 6.7E-146 T 22-04-2016 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 PANTHER PTHR30146:SF48 1 332 6.7E-146 T 22-04-2016 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.9E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 Gene3D G3DSA:3.40.50.2300 168 330 1.5E-49 T 22-04-2016 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 Pfam PF13377 Periplasmic binding protein-like domain 170 330 4.0E-36 T 22-04-2016 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 SUPERFAMILY SSF53822 61 331 7.86E-74 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 Gene3D G3DSA:3.40.50.2300 58 167 1.5E-40 T 22-04-2016 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 Gene3D G3DSA:1.10.260.40 2 57 2.7E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 SMART SM00354 1 71 2.5E-34 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS07225 dcb159f7caca0467f979e23274093215 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 PANTHER PTHR11063:SF8 1 411 3.0E-178 T 22-04-2016 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 SUPERFAMILY SSF53720 4 408 5.89E-112 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 405 3.6E-166 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 322 343 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 Pfam PF00171 Aldehyde dehydrogenase family 8 278 6.6E-15 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 415 39.118 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 Gene3D G3DSA:3.40.605.10 374 412 2.1E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 Gene3D G3DSA:3.40.605.10 5 221 2.1E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 Gene3D G3DSA:3.40.309.10 224 373 9.1E-35 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 PIRSF PIRSF000151 1 416 1.8E-165 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VCLMA_RS10555 13fb0242d8283ad951464cbdded13251 416 PANTHER PTHR11063 1 411 3.0E-178 T 22-04-2016 VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 SMART SM00922 116 211 1.1E-5 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 PANTHER PTHR13794 6 317 2.9E-103 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 Pfam PF13378 Enolase C-terminal domain-like 130 279 5.9E-12 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 312 6.1E-136 T 22-04-2016 VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 PANTHER PTHR13794:SF8 6 317 2.9E-103 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 320 23.586 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 Gene3D G3DSA:3.20.20.120 124 302 4.7E-43 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 SUPERFAMILY SSF51604 104 317 5.11E-45 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 SUPERFAMILY SSF54826 1 99 1.53E-28 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VCLMA_RS09055 f1a0aad0730fcca42c7ba3068b375542 332 Gene3D G3DSA:3.30.390.10 1 123 9.3E-33 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VCLMA_RS09405 9dda2bb8b2d16ea36f2a4a608505874e 306 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 3.2E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily VCLMA_RS09405 9dda2bb8b2d16ea36f2a4a608505874e 306 PRINTS PR01270 Histone deacetylase superfamily signature 230 240 3.2E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily VCLMA_RS09405 9dda2bb8b2d16ea36f2a4a608505874e 306 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 3.2E-16 T 22-04-2016 IPR000286 Histone deacetylase superfamily VCLMA_RS09405 9dda2bb8b2d16ea36f2a4a608505874e 306 PANTHER PTHR10625 1 291 9.6E-138 T 22-04-2016 IPR000286 Histone deacetylase superfamily VCLMA_RS09405 9dda2bb8b2d16ea36f2a4a608505874e 306 SUPERFAMILY SSF52768 3 291 7.19E-78 T 22-04-2016 VCLMA_RS09405 9dda2bb8b2d16ea36f2a4a608505874e 306 Gene3D G3DSA:3.40.800.20 2 289 2.1E-60 T 22-04-2016 IPR023801 Histone deacetylase domain VCLMA_RS09405 9dda2bb8b2d16ea36f2a4a608505874e 306 Pfam PF00850 Histone deacetylase domain 37 289 1.1E-46 T 22-04-2016 IPR023801 Histone deacetylase domain VCLMA_RS09405 9dda2bb8b2d16ea36f2a4a608505874e 306 PANTHER PTHR10625:SF131 1 291 9.6E-138 T 22-04-2016 VCLMA_RS07780 6f0d172a90bc21c9aac50d638d6f374a 390 Gene3D G3DSA:3.40.640.10 6 255 3.5E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS07780 6f0d172a90bc21c9aac50d638d6f374a 390 PIRSF PIRSF001434 1 389 1.2E-121 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS07780 6f0d172a90bc21c9aac50d638d6f374a 390 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 384 9.8E-115 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS07780 6f0d172a90bc21c9aac50d638d6f374a 390 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 385 9.4E-170 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 VCLMA_RS07780 6f0d172a90bc21c9aac50d638d6f374a 390 Gene3D G3DSA:3.90.1150.10 256 386 5.1E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS07780 6f0d172a90bc21c9aac50d638d6f374a 390 SUPERFAMILY SSF53383 21 384 5.65E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS07780 6f0d172a90bc21c9aac50d638d6f374a 390 PANTHER PTHR11808:SF45 1 385 7.5E-274 T 22-04-2016 VCLMA_RS07780 6f0d172a90bc21c9aac50d638d6f374a 390 PANTHER PTHR11808 1 385 7.5E-274 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS07780 6f0d172a90bc21c9aac50d638d6f374a 390 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS11425 9e039c92b82dd000bca0676d934f5c48 206 PANTHER PTHR38104 1 204 1.1E-71 T 22-04-2016 VCLMA_RS11425 9e039c92b82dd000bca0676d934f5c48 206 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 138 189 3.5E-20 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal VCLMA_RS11425 9e039c92b82dd000bca0676d934f5c48 206 SUPERFAMILY SSF89069 4 67 9.81E-21 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VCLMA_RS11425 9e039c92b82dd000bca0676d934f5c48 206 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 98 4.6E-33 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VCLMA_RS11425 9e039c92b82dd000bca0676d934f5c48 206 PIRSF PIRSF016938 1 201 3.8E-34 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 VCLMA_RS15890 41156b886cc2eddfc7d3b124cc4618f0 422 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 267 422 2.7E-67 T 22-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain VCLMA_RS15890 41156b886cc2eddfc7d3b124cc4618f0 422 Pfam PF06165 Glycosyltransferase family 36 2 238 2.1E-78 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 VCLMA_RS15890 41156b886cc2eddfc7d3b124cc4618f0 422 SUPERFAMILY SSF74650 2 240 7.53E-67 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VCLMA_RS15890 41156b886cc2eddfc7d3b124cc4618f0 422 Gene3D G3DSA:2.70.98.40 2 296 6.2E-86 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 VCLMA_RS15890 41156b886cc2eddfc7d3b124cc4618f0 422 PANTHER PTHR37469 1 364 2.8E-225 T 22-04-2016 VCLMA_RS15890 41156b886cc2eddfc7d3b124cc4618f0 422 PANTHER PTHR37469 390 422 2.8E-225 T 22-04-2016 VCLMA_RS15890 41156b886cc2eddfc7d3b124cc4618f0 422 SUPERFAMILY SSF48208 244 421 9.35E-29 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VCLMA_RS15890 41156b886cc2eddfc7d3b124cc4618f0 422 PANTHER PTHR37469:SF1 1 364 2.8E-225 T 22-04-2016 VCLMA_RS15890 41156b886cc2eddfc7d3b124cc4618f0 422 PANTHER PTHR37469:SF1 390 422 2.8E-225 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 Gene3D G3DSA:3.50.50.60 279 338 4.1E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 Gene3D G3DSA:3.50.50.60 6 150 4.1E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 Gene3D G3DSA:3.30.390.30 344 460 2.2E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PANTHER PTHR22912:SF93 1 461 7.2E-287 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.2E-27 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 3.2E-27 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 3.2E-27 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 3.2E-27 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 3.2E-27 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 SUPERFAMILY SSF55424 345 463 2.06E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 SUPERFAMILY SSF51905 2 323 4.04E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PIRSF PIRSF000350 1 463 1.2E-70 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 4.8E-30 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.1E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 Gene3D G3DSA:3.50.50.60 157 278 3.0E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PANTHER PTHR22912 1 461 7.2E-287 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 64.905 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.8E-49 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.8E-49 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 2.8E-49 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.8E-49 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.8E-49 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.8E-49 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.8E-49 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.8E-49 T 22-04-2016 VCLMA_RS00745 2dd93a9c4391e7ae627d71e8dc3b7860 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 2.8E-49 T 22-04-2016 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 PANTHER PTHR30183:SF2 407 541 0.0 T 22-04-2016 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 PANTHER PTHR30183:SF2 2 390 0.0 T 22-04-2016 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 347 528 1.3E-7 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 254 1.7E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 PANTHER PTHR30183 407 541 0.0 T 22-04-2016 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 PANTHER PTHR30183 2 390 0.0 T 22-04-2016 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 SUPERFAMILY SSF161098 281 535 2.62E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 Gene3D G3DSA:1.10.3720.10 291 536 4.7E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 Gene3D G3DSA:1.10.3720.10 12 264 4.3E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02960 95012cb157240ca7be0ac60a679630b5 541 SUPERFAMILY SSF161098 5 255 9.05E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06415 3591e2e9e73f0d3b20b2c58a4edc91dc 251 SUPERFAMILY SSF52540 10 244 3.68E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06415 3591e2e9e73f0d3b20b2c58a4edc91dc 251 Pfam PF00005 ABC transporter 26 174 3.8E-39 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS06415 3591e2e9e73f0d3b20b2c58a4edc91dc 251 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS06415 3591e2e9e73f0d3b20b2c58a4edc91dc 251 SMART SM00382 35 222 2.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS06415 3591e2e9e73f0d3b20b2c58a4edc91dc 251 PANTHER PTHR24220:SF490 12 251 9.3E-203 T 22-04-2016 VCLMA_RS06415 3591e2e9e73f0d3b20b2c58a4edc91dc 251 PANTHER PTHR24220 12 251 9.3E-203 T 22-04-2016 VCLMA_RS06415 3591e2e9e73f0d3b20b2c58a4edc91dc 251 PIRSF PIRSF039085 7 250 1.1E-111 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VCLMA_RS06415 3591e2e9e73f0d3b20b2c58a4edc91dc 251 Gene3D G3DSA:3.40.50.300 10 245 2.0E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 PANTHER PTHR32282:SF11 163 727 4.6E-276 T 22-04-2016 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 SUPERFAMILY SSF56601 329 351 1.58E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 SUPERFAMILY SSF56601 379 771 1.58E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 Gene3D G3DSA:1.20.5.100 33 62 4.9E-5 T 22-04-2016 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 180 714 1.3E-158 T 22-04-2016 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 Gene3D G3DSA:3.40.710.10 350 751 2.2E-109 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 SUPERFAMILY SSF53955 171 369 8.15E-69 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 35 758 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 PIRSF PIRSF002799 2 777 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 Pfam PF00905 Penicillin binding protein transpeptidase domain 439 678 3.9E-21 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 Pfam PF00912 Transglycosylase 176 347 1.8E-58 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 Gene3D G3DSA:3.30.2060.10 78 167 1.1E-29 T 22-04-2016 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 Gene3D G3DSA:1.10.3810.10 173 349 4.5E-66 T 22-04-2016 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 PANTHER PTHR32282 163 727 4.6E-276 T 22-04-2016 VCLMA_RS02925 b7d2d7e9e107ddfd46d25131c0dc3650 777 Pfam PF14814 Bifunctional transglycosylase second domain 80 164 1.2E-26 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 7.2E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 7.2E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 7.2E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 108 128 7.2E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 7.2E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 7.2E-39 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 SUPERFAMILY SSF53335 76 263 5.39E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 SUPERFAMILY SSF47757 2 75 2.22E-18 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 PANTHER PTHR24422 1 263 1.3E-87 T 22-04-2016 VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 PANTHER PTHR24422:SF14 1 263 1.3E-87 T 22-04-2016 VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 Gene3D G3DSA:1.10.155.10 2 74 6.1E-20 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 PIRSF PIRSF000410 1 276 7.2E-78 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 58 2.3E-10 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 264 2.8E-57 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 Gene3D G3DSA:3.40.50.150 75 264 3.1E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06600 59633430f7ed4de37ab360f1f5f82ca6 281 SMART SM00138 8 275 1.9E-75 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VCLMA_RS07745 b10505acdc1bf26e28c7525eb971a69d 566 Gene3D G3DSA:1.10.3720.10 5 281 1.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07745 b10505acdc1bf26e28c7525eb971a69d 566 Gene3D G3DSA:1.10.3720.10 302 546 3.7E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07745 b10505acdc1bf26e28c7525eb971a69d 566 SUPERFAMILY SSF161098 5 271 4.58E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07745 b10505acdc1bf26e28c7525eb971a69d 566 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 367 535 1.1E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07745 b10505acdc1bf26e28c7525eb971a69d 566 PANTHER PTHR30183 36 548 0.0 T 22-04-2016 VCLMA_RS07745 b10505acdc1bf26e28c7525eb971a69d 566 PANTHER PTHR30183:SF6 36 548 0.0 T 22-04-2016 VCLMA_RS07745 b10505acdc1bf26e28c7525eb971a69d 566 SUPERFAMILY SSF161098 301 538 3.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 Gene3D G3DSA:1.10.1740.10 2 112 7.5E-39 T 22-04-2016 VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 Gene3D G3DSA:1.10.10.10 125 188 9.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 Pfam PF08281 Sigma-70, region 4 134 181 3.9E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 Pfam PF04542 Sigma-70 region 2 25 92 7.6E-19 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 3.7E-101 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 9.0E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 SUPERFAMILY SSF88659 124 185 2.99E-17 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 PANTHER PTHR30173 1 187 1.6E-55 T 22-04-2016 VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 SUPERFAMILY SSF88946 2 108 2.2E-33 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11430 d87ec20adb1220e987f7b83a8c6dd7a9 190 PANTHER PTHR30173:SF1 1 187 1.6E-55 T 22-04-2016 VCLMA_RS00440 4cbaeb51e7b1070227f56fef3687ffe3 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 5.6E-178 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VCLMA_RS00440 4cbaeb51e7b1070227f56fef3687ffe3 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.689 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 VCLMA_RS00440 4cbaeb51e7b1070227f56fef3687ffe3 544 PANTHER PTHR10566 1 456 1.4E-294 T 22-04-2016 VCLMA_RS00440 4cbaeb51e7b1070227f56fef3687ffe3 544 Pfam PF03109 ABC1 family 111 230 1.8E-37 T 22-04-2016 IPR004147 UbiB domain VCLMA_RS00440 4cbaeb51e7b1070227f56fef3687ffe3 544 PANTHER PTHR10566:SF79 1 456 1.4E-294 T 22-04-2016 VCLMA_RS00440 4cbaeb51e7b1070227f56fef3687ffe3 544 SUPERFAMILY SSF56112 94 158 1.19E-47 T 22-04-2016 IPR011009 Protein kinase-like domain VCLMA_RS00440 4cbaeb51e7b1070227f56fef3687ffe3 544 SUPERFAMILY SSF56112 193 436 1.19E-47 T 22-04-2016 IPR011009 Protein kinase-like domain VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 SUPERFAMILY SSF52540 207 267 8.46E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 SUPERFAMILY SSF52540 630 666 8.46E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 SUPERFAMILY SSF52540 16 123 8.46E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 Gene3D G3DSA:3.40.50.300 537 667 9.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 PANTHER PTHR11472:SF32 1 688 0.0 T 22-04-2016 VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 PANTHER PTHR11472 1 688 0.0 T 22-04-2016 VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 Gene3D G3DSA:3.40.50.300 212 253 3.7E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 Gene3D G3DSA:3.40.50.300 47 131 3.7E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 SMART SM00491 535 671 5.9E-29 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 Pfam PF06733 DEAD_2 197 262 2.7E-5 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 Pfam PF13307 Helicase C-terminal domain 526 684 2.1E-36 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 SUPERFAMILY SSF52540 203 320 9.25E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 SUPERFAMILY SSF52540 641 665 9.25E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08510 e36609b1f9ae0be215050c17c0c0f8a9 691 SUPERFAMILY SSF52540 510 610 9.25E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 SUPERFAMILY SSF55120 60 226 5.44E-48 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 Gene3D G3DSA:3.10.290.10 1 63 5.5E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 PANTHER PTHR21600 1 231 1.3E-74 T 22-04-2016 VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 SMART SM00363 1 59 1.5E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 Pfam PF00849 RNA pseudouridylate synthase 61 191 2.2E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 PANTHER PTHR21600:SF19 1 231 1.3E-74 T 22-04-2016 VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 SUPERFAMILY SSF55174 1 79 4.86E-12 T 22-04-2016 VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 Pfam PF01479 S4 domain 1 43 5.8E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS07600 afce6b413fb897076bed1de35ef36b30 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 223 1.0E-49 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VCLMA_RS05955 e694bd3d8b43e3aa34d10f29f29f0959 198 PANTHER PTHR21327:SF6 21 198 3.0E-74 T 22-04-2016 VCLMA_RS05955 e694bd3d8b43e3aa34d10f29f29f0959 198 PANTHER PTHR21327 21 198 3.0E-74 T 22-04-2016 VCLMA_RS05955 e694bd3d8b43e3aa34d10f29f29f0959 198 Pfam PF00925 GTP cyclohydrolase II 19 171 1.1E-58 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VCLMA_RS05955 e694bd3d8b43e3aa34d10f29f29f0959 198 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 3 198 37.91 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VCLMA_RS05955 e694bd3d8b43e3aa34d10f29f29f0959 198 SUPERFAMILY SSF142695 19 172 1.83E-54 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.3E-97 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 SMART SM01232 129 221 3.0E-45 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 PANTHER PTHR22993:SF15 1 268 9.2E-134 T 22-04-2016 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 Gene3D G3DSA:1.10.8.50 130 269 3.5E-51 T 22-04-2016 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 SUPERFAMILY SSF57716 217 268 9.17E-17 T 22-04-2016 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 3.5E-30 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 SUPERFAMILY SSF81624 2 138 1.7E-39 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 SMART SM00898 2 115 1.5E-51 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 43.91 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 3.2E-7 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 SUPERFAMILY SSF46946 130 222 3.24E-30 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 Gene3D G3DSA:3.20.190.10 2 129 8.6E-37 T 22-04-2016 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 PANTHER PTHR22993 1 268 9.2E-134 T 22-04-2016 VCLMA_RS01065 1ddbad1c6cc4379a90df416469ff0147 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 6.2E-28 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 Pfam PF00294 pfkB family carbohydrate kinase 77 292 1.1E-10 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 SUPERFAMILY SSF53613 338 417 1.14E-44 T 22-04-2016 IPR029056 Ribokinase-like VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 SUPERFAMILY SSF53613 31 305 1.14E-44 T 22-04-2016 IPR029056 Ribokinase-like VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 Gene3D G3DSA:3.30.1110.10 45 95 1.2E-5 T 22-04-2016 VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 Gene3D G3DSA:3.40.1190.20 96 298 3.9E-45 T 22-04-2016 IPR029056 Ribokinase-like VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 Gene3D G3DSA:3.40.1190.20 337 434 3.9E-45 T 22-04-2016 IPR029056 Ribokinase-like VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 PANTHER PTHR10584:SF202 17 293 1.4E-261 T 22-04-2016 VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 PANTHER PTHR10584:SF202 332 376 1.4E-261 T 22-04-2016 VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 PANTHER PTHR10584:SF202 393 434 1.4E-261 T 22-04-2016 VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 PANTHER PTHR10584 17 293 1.4E-261 T 22-04-2016 VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 PANTHER PTHR10584 332 376 1.4E-261 T 22-04-2016 VCLMA_RS05310 f6e542d94ffbefcd471134361ff29024 434 PANTHER PTHR10584 393 434 1.4E-261 T 22-04-2016 VCLMA_RS01155 c826f65680a6f0beefe5f00acaa9549c 314 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 2.4E-46 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VCLMA_RS01155 c826f65680a6f0beefe5f00acaa9549c 314 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 314 55.943 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VCLMA_RS01155 c826f65680a6f0beefe5f00acaa9549c 314 SUPERFAMILY SSF51735 1 308 3.22E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01155 c826f65680a6f0beefe5f00acaa9549c 314 PANTHER PTHR10366:SF469 1 314 3.5E-118 T 22-04-2016 VCLMA_RS01155 c826f65680a6f0beefe5f00acaa9549c 314 PANTHER PTHR10366 1 314 3.5E-118 T 22-04-2016 VCLMA_RS01155 c826f65680a6f0beefe5f00acaa9549c 314 Gene3D G3DSA:3.40.50.720 2 176 2.8E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01155 c826f65680a6f0beefe5f00acaa9549c 314 Gene3D G3DSA:3.90.25.10 177 294 1.9E-37 T 22-04-2016 VCLMA_RS01155 c826f65680a6f0beefe5f00acaa9549c 314 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 313 3.4E-126 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Gene3D G3DSA:3.40.50.2300 167 330 5.2E-52 T 22-04-2016 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 SUPERFAMILY SSF47413 1 60 2.16E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 SUPERFAMILY SSF53822 61 331 2.16E-81 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 SMART SM00354 1 71 2.7E-34 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 PANTHER PTHR30146 1 335 2.0E-203 T 22-04-2016 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.5E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Gene3D G3DSA:1.10.260.40 2 57 1.8E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 PANTHER PTHR30146:SF55 1 335 2.0E-203 T 22-04-2016 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.0E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Gene3D G3DSA:3.40.50.2300 58 166 4.0E-49 T 22-04-2016 VCLMA_RS10825 d685dd97f7fff4c7ee8299c4fb7e0f40 335 Pfam PF13377 Periplasmic binding protein-like domain 169 329 2.4E-37 T 22-04-2016 VCLMA_RS10865 ec4f4caccede4c7ea0c6b65b9a5547cd 326 SUPERFAMILY SSF56784 104 310 1.96E-48 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS10865 ec4f4caccede4c7ea0c6b65b9a5547cd 326 Gene3D G3DSA:3.40.50.1000 169 297 1.3E-35 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS10865 ec4f4caccede4c7ea0c6b65b9a5547cd 326 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 277 7.6E-24 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 VCLMA_RS10865 ec4f4caccede4c7ea0c6b65b9a5547cd 326 Gene3D G3DSA:1.10.150.210 117 168 1.3E-27 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 VCLMA_RS10865 ec4f4caccede4c7ea0c6b65b9a5547cd 326 PANTHER PTHR10000:SF7 59 316 4.9E-110 T 22-04-2016 VCLMA_RS10865 ec4f4caccede4c7ea0c6b65b9a5547cd 326 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 279 5.9E-16 T 22-04-2016 VCLMA_RS10865 ec4f4caccede4c7ea0c6b65b9a5547cd 326 PANTHER PTHR10000 59 316 4.9E-110 T 22-04-2016 VCLMA_RS10865 ec4f4caccede4c7ea0c6b65b9a5547cd 326 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 101 310 2.3E-85 T 22-04-2016 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 SUPERFAMILY SSF55785 3 70 1.85E-5 T 22-04-2016 IPR000014 PAS domain VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 175 272 2.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PANTHER PTHR24423:SF497 240 439 2.2E-135 T 22-04-2016 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PANTHER PTHR24423:SF497 170 202 2.2E-135 T 22-04-2016 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PANTHER PTHR24423:SF497 5 146 2.2E-135 T 22-04-2016 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 424 1.4E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 Pfam PF08448 PAS fold 12 131 5.8E-7 T 22-04-2016 IPR013656 PAS fold-4 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PANTHER PTHR24423 240 439 2.2E-135 T 22-04-2016 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PANTHER PTHR24423 170 202 2.2E-135 T 22-04-2016 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PANTHER PTHR24423 5 146 2.2E-135 T 22-04-2016 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 Gene3D G3DSA:3.30.450.20 3 124 2.0E-8 T 22-04-2016 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 SUPERFAMILY SSF47384 169 221 2.16E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 2.7E-21 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 2.7E-21 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 2.7E-21 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 2.7E-21 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 SMART SM00387 317 426 4.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 SMART SM00388 174 276 0.0016 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 SUPERFAMILY SSF55874 270 424 1.09E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 Gene3D G3DSA:3.30.565.10 281 424 1.8E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 Gene3D G3DSA:1.10.287.130 170 200 2.4E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05095 84ff6e5b48e2501b4ac664cdbe9c63f2 439 Gene3D G3DSA:1.10.287.130 243 271 2.4E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 SUPERFAMILY SSF50037 271 317 4.49E-10 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 8.0E-12 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 PANTHER PTHR12835 1 317 3.5E-90 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 Pfam PF08279 HTH domain 8 59 2.1E-10 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 85 207 3.6E-19 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 SUPERFAMILY SSF55681 68 268 5.18E-61 T 22-04-2016 VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 33.688 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 SUPERFAMILY SSF46785 4 60 3.27E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 Gene3D G3DSA:3.30.930.10 69 268 1.0E-60 T 22-04-2016 VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 Gene3D G3DSA:2.30.30.100 271 319 1.1E-21 T 22-04-2016 VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 Gene3D G3DSA:1.10.10.10 1 62 9.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS01545 b9067a58150688bec3ba47575b330a34 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 317 2.4E-67 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 Gene3D G3DSA:3.40.50.790 69 159 1.6E-39 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 Gene3D G3DSA:3.30.190.20 18 68 1.6E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 Gene3D G3DSA:3.30.190.20 161 226 1.6E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 PIRSF PIRSF002155 1 227 1.5E-77 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.2E-50 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 PANTHER PTHR23105 19 229 1.2E-80 T 22-04-2016 VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 3.9E-105 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 PANTHER PTHR23105:SF5 19 229 1.2E-80 T 22-04-2016 VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.805 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 SUPERFAMILY SSF56808 6 226 2.35E-81 T 22-04-2016 IPR023674 Ribosomal protein L1-like VCLMA_RS01595 25820efb6327b6ce35cca62e046ea0c3 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site VCLMA_RS01380 63b9e158d8ec990929d0e783169e88e5 171 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 164 1.9E-63 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 VCLMA_RS01380 63b9e158d8ec990929d0e783169e88e5 171 PANTHER PTHR11603 6 168 5.3E-87 T 22-04-2016 VCLMA_RS01380 63b9e158d8ec990929d0e783169e88e5 171 Pfam PF01202 Shikimate kinase 13 129 1.2E-13 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS01380 63b9e158d8ec990929d0e783169e88e5 171 Gene3D G3DSA:3.40.50.300 3 167 2.6E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01380 63b9e158d8ec990929d0e783169e88e5 171 SUPERFAMILY SSF52540 4 168 2.21E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 287 5.8E-23 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 257 2.6E-36 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 198 214 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 Gene3D G3DSA:3.40.50.720 116 259 1.5E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 SUPERFAMILY SSF52283 3 132 1.59E-22 T 22-04-2016 VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 PANTHER PTHR10996:SF111 1 331 2.1E-185 T 22-04-2016 VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 SUPERFAMILY SSF51735 93 258 6.81E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 Pfam PF11890 Domain of unknown function (DUF3410) 290 370 9.9E-28 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 Gene3D G3DSA:3.40.50.720 1 115 1.4E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 PANTHER PTHR10996 1 331 2.1E-185 T 22-04-2016 VCLMA_RS09715 f4feccae306e53259a6e6df30f6650b5 381 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 358 46.322 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 SUPERFAMILY SSF54680 343 441 5.49E-29 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 PIRSF PIRSF000478 8 443 3.3E-151 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 PANTHER PTHR10515:SF0 11 447 8.3E-219 T 22-04-2016 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 PANTHER PTHR10515 11 447 8.3E-219 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 SMART SM00941 356 430 2.8E-28 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 Pfam PF00591 Glycosyl transferase family, a/b domain 86 315 2.8E-48 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 119 134 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 Gene3D G3DSA:3.90.1170.30 345 437 1.5E-33 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 SUPERFAMILY SSF52418 79 339 1.83E-88 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 356 429 1.2E-23 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 11 429 2.2E-160 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 SUPERFAMILY SSF47648 10 76 2.49E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 9 432 2.3E-215 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 Gene3D G3DSA:1.20.970.10 8 73 2.9E-29 T 22-04-2016 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 Pfam PF02885 Glycosyl transferase family, helical bundle domain 12 73 1.2E-20 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 Gene3D G3DSA:3.40.1030.10 81 344 5.9E-110 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 VCLMA_RS10885 611c01ed9f07542b114a35446ebab79e 448 Hamap MF_01628 Thymidine phosphorylase [deoA]. 7 444 51.188 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 VCLMA_RS04955 a6aa2053a620402f44166537585a5214 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.472 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VCLMA_RS04955 a6aa2053a620402f44166537585a5214 109 PANTHER PTHR33449 1 109 5.5E-55 T 22-04-2016 VCLMA_RS04955 a6aa2053a620402f44166537585a5214 109 PANTHER PTHR33449:SF1 1 109 5.5E-55 T 22-04-2016 VCLMA_RS04955 a6aa2053a620402f44166537585a5214 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 8.6E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VCLMA_RS04955 a6aa2053a620402f44166537585a5214 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.6E-39 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VCLMA_RS04955 a6aa2053a620402f44166537585a5214 109 SUPERFAMILY SSF82607 11 103 1.2E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VCLMA_RS04955 a6aa2053a620402f44166537585a5214 109 Gene3D G3DSA:3.30.1310.10 1 109 1.6E-51 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VCLMA_RS04955 a6aa2053a620402f44166537585a5214 109 PIRSF PIRSF004555 3 109 5.8E-40 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family VCLMA_RS03290 127989109f697b6764a1373d77376882 283 PANTHER PTHR11548 2 283 1.1E-109 T 22-04-2016 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 7.2E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 7.2E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 7.2E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 7.2E-14 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 1.9E-42 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 SUPERFAMILY SSF55831 3 283 1.31E-91 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 Gene3D G3DSA:3.30.572.10 2 283 1.7E-78 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 33.095 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS03290 127989109f697b6764a1373d77376882 283 Pfam PF00303 Thymidylate synthase 2 283 1.7E-74 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 VCLMA_RS07805 2ba7538d1946f355e528468ad6e57d0b 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 250 7.3E-12 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCLMA_RS07805 2ba7538d1946f355e528468ad6e57d0b 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 337 3.5E-94 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VCLMA_RS07805 2ba7538d1946f355e528468ad6e57d0b 343 PANTHER PTHR30469:SF10 4 335 1.2E-150 T 22-04-2016 VCLMA_RS07805 2ba7538d1946f355e528468ad6e57d0b 343 PANTHER PTHR30469 4 335 1.2E-150 T 22-04-2016 VCLMA_RS07805 2ba7538d1946f355e528468ad6e57d0b 343 Gene3D G3DSA:2.40.50.100 152 184 7.6E-13 T 22-04-2016 VCLMA_RS07805 2ba7538d1946f355e528468ad6e57d0b 343 Gene3D G3DSA:2.40.50.100 62 91 7.6E-13 T 22-04-2016 VCLMA_RS07805 2ba7538d1946f355e528468ad6e57d0b 343 SUPERFAMILY SSF111369 46 264 4.84E-31 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 9 434 29.122 T 22-04-2016 IPR026593 Protein translocase subunit SecY VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 3.5E-134 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 Pfam PF00344 SecY translocase 76 418 9.5E-118 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PANTHER PTHR10906:SF2 17 444 1.1E-229 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PIRSF PIRSF004557 11 442 8.6E-121 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PANTHER PTHR10906 17 444 1.1E-229 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 Gene3D G3DSA:1.10.3370.10 15 438 3.4E-163 T 22-04-2016 IPR023201 SecY subunit domain VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 22-04-2016 IPR030659 SecY conserved site VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 SUPERFAMILY SSF103491 15 425 3.79E-130 T 22-04-2016 IPR023201 SecY subunit domain VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 22-04-2016 IPR030659 SecY conserved site VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 4.9E-95 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 4.9E-95 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 4.9E-95 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 4.9E-95 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 4.9E-95 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 4.9E-95 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 4.9E-95 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 4.9E-95 T 22-04-2016 VCLMA_RS11990 d35950f1687d1310f0fd9902369d054a 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 4.9E-95 T 22-04-2016 VCLMA_RS06340 ab231da6e8f1a726eb6713a8cc7601ae 465 Gene3D G3DSA:3.90.79.10 19 111 1.2E-14 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS06340 ab231da6e8f1a726eb6713a8cc7601ae 465 PANTHER PTHR22769 17 168 2.1E-12 T 22-04-2016 VCLMA_RS06340 ab231da6e8f1a726eb6713a8cc7601ae 465 SUPERFAMILY SSF55811 19 78 6.36E-18 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS06340 ab231da6e8f1a726eb6713a8cc7601ae 465 SUPERFAMILY SSF55811 111 158 6.36E-18 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS06340 ab231da6e8f1a726eb6713a8cc7601ae 465 Gene3D G3DSA:1.20.144.10 149 339 1.6E-5 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VCLMA_RS06340 ab231da6e8f1a726eb6713a8cc7601ae 465 Pfam PF00293 NUDIX domain 19 99 4.0E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VCLMA_RS06340 ab231da6e8f1a726eb6713a8cc7601ae 465 SUPERFAMILY SSF48317 185 339 2.83E-5 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 Gene3D G3DSA:3.40.50.261 241 383 1.7E-66 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 Gene3D G3DSA:3.30.1490.20 22 95 2.0E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 SUPERFAMILY SSF56059 1 238 1.71E-78 T 22-04-2016 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 Pfam PF00549 CoA-ligase 262 382 2.0E-24 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.9E-172 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 PIRSF PIRSF001554 1 388 2.6E-154 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 SUPERFAMILY SSF52210 240 385 2.49E-53 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 Pfam PF08442 ATP-grasp domain 2 203 5.0E-79 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.462 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 PANTHER PTHR11815 1 388 6.1E-231 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 VCLMA_RS09610 c722e82551746932e40fe511b429da19 388 Gene3D G3DSA:3.30.470.20 96 239 5.2E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS00160 3f2fa72c774d715a34c27c4431bff821 294 PANTHER PTHR10983 1 292 2.7E-147 T 22-04-2016 VCLMA_RS00160 3f2fa72c774d715a34c27c4431bff821 294 PANTHER PTHR10983:SF15 1 292 2.7E-147 T 22-04-2016 VCLMA_RS00160 3f2fa72c774d715a34c27c4431bff821 294 SMART SM00563 85 227 1.5E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS00160 3f2fa72c774d715a34c27c4431bff821 294 SUPERFAMILY SSF69593 18 249 2.88E-27 T 22-04-2016 VCLMA_RS00160 3f2fa72c774d715a34c27c4431bff821 294 Pfam PF01553 Acyltransferase 73 226 6.3E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 SUPERFAMILY SSF82114 175 310 3.27E-44 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 Gene3D G3DSA:2.40.30.30 180 311 1.5E-39 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 1.0E-105 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 Pfam PF06574 FAD synthetase 11 167 7.9E-60 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 PANTHER PTHR22749:SF0 1 308 1.2E-143 T 22-04-2016 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 SUPERFAMILY SSF52374 16 179 1.48E-33 T 22-04-2016 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 Pfam PF01687 Riboflavin kinase 184 306 4.9E-38 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 PANTHER PTHR22749 1 308 1.2E-143 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 PIRSF PIRSF004491 1 313 5.2E-108 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 SMART SM00904 183 307 1.2E-65 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 VCLMA_RS03320 bf079b3c1f983dc0161863c8ec58f426 322 Gene3D G3DSA:3.40.50.620 1 179 7.8E-68 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 105.041 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 Gene3D G3DSA:3.90.1150.10 2 69 2.6E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 Gene3D G3DSA:3.90.1150.10 319 424 2.6E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 3.8E-194 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 PANTHER PTHR11986 1 431 2.5E-238 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 PANTHER PTHR11986:SF5 1 431 2.5E-238 T 22-04-2016 VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 Gene3D G3DSA:3.40.640.10 71 316 2.2E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 Pfam PF00202 Aminotransferase class-III 33 396 1.1E-76 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VCLMA_RS03045 ba1be6d4cafb83939d43781ca9bd0227 432 SUPERFAMILY SSF53383 1 423 1.35E-134 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 SMART SM00052 341 588 6.8E-66 T 22-04-2016 IPR001633 EAL domain VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 SUPERFAMILY SSF141868 353 595 4.18E-68 T 22-04-2016 IPR001633 EAL domain VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 Gene3D G3DSA:3.30.70.270 169 337 4.0E-32 T 22-04-2016 VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 Gene3D G3DSA:3.20.20.450 357 593 3.9E-70 T 22-04-2016 IPR001633 EAL domain VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 SUPERFAMILY SSF55073 172 332 6.2E-28 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 PANTHER PTHR33121:SF10 297 584 1.8E-50 T 22-04-2016 VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 PANTHER PTHR33121:SF10 31 40 1.8E-50 T 22-04-2016 VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 PANTHER PTHR33121 297 584 1.8E-50 T 22-04-2016 VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 PANTHER PTHR33121 31 40 1.8E-50 T 22-04-2016 VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 SMART SM00267 156 331 1.8E-25 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 Pfam PF00563 EAL domain 348 583 3.8E-58 T 22-04-2016 IPR001633 EAL domain VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 324 4.6E-28 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS08885 f844f0bc732cc1c92997523f93003296 610 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 330 1.9E-24 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS10475 68044e63e0c644a2a6ea2b8ee532296e 250 SUPERFAMILY SSF64005 10 234 6.15E-88 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VCLMA_RS10475 68044e63e0c644a2a6ea2b8ee532296e 250 Gene3D G3DSA:3.40.1180.10 6 245 6.6E-100 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VCLMA_RS10475 68044e63e0c644a2a6ea2b8ee532296e 250 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.45 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VCLMA_RS10475 68044e63e0c644a2a6ea2b8ee532296e 250 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 VCLMA_RS10475 68044e63e0c644a2a6ea2b8ee532296e 250 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 8.8E-82 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VCLMA_RS10475 68044e63e0c644a2a6ea2b8ee532296e 250 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 1.4E-95 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VCLMA_RS10475 68044e63e0c644a2a6ea2b8ee532296e 250 PANTHER PTHR10291 6 250 1.7E-126 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 PANTHER PTHR32071:SF3 4 513 3.3E-191 T 22-04-2016 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 Pfam PF00989 PAS fold 84 130 5.3E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 SUPERFAMILY SSF46689 457 511 2.75E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 Gene3D G3DSA:3.30.70.260 1 68 9.3E-7 T 22-04-2016 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 PANTHER PTHR32071 4 513 3.3E-191 T 22-04-2016 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 Pfam PF00158 Sigma-54 interaction domain 206 370 8.0E-58 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 SUPERFAMILY SSF55785 83 161 2.62E-8 T 22-04-2016 IPR000014 PAS domain VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 SMART SM00382 225 368 4.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 Gene3D G3DSA:3.30.450.20 79 171 8.6E-11 T 22-04-2016 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 SUPERFAMILY SSF55021 1 68 1.48E-6 T 22-04-2016 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 Gene3D G3DSA:3.40.50.300 202 376 1.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 Gene3D G3DSA:1.10.8.60 377 448 6.9E-18 T 22-04-2016 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 464 512 7.2E-27 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 SUPERFAMILY SSF52540 205 443 1.16E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 Gene3D G3DSA:1.10.10.60 458 512 1.5E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 SMART SM00091 80 146 2.9E-5 T 22-04-2016 IPR000014 PAS domain VCLMA_RS06175 2fe14e0b245f3471d02ff353dc8a8b56 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 SUPERFAMILY SSF53774 3 336 1.7E-112 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 Gene3D G3DSA:3.40.50.1170 4 203 1.8E-78 T 22-04-2016 IPR027474 L-asparaginase, N-terminal VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 8.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 PRINTS PR00139 Asparaginase/glutaminase family signature 261 279 8.4E-17 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 PANTHER PTHR11707:SF31 1 336 6.8E-259 T 22-04-2016 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 PIRSF PIRSF001220 1 335 4.9E-95 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 SMART SM00870 5 324 4.2E-140 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 PIRSF PIRSF500176 2 333 1.5E-109 T 22-04-2016 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 336 1.0E-114 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 Gene3D G3DSA:3.40.50.40 212 336 7.8E-49 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 Pfam PF00710 Asparaginase, N-terminal 5 192 5.8E-66 T 22-04-2016 IPR027474 L-asparaginase, N-terminal VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VCLMA_RS09170 9f3e1bbdff513eb7358a66996cdd6df3 337 PANTHER PTHR11707 1 336 6.8E-259 T 22-04-2016 VCLMA_RS07675 7e015badf0b4373ab2b82bc0632a7e5d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 434 452 5.1E-30 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VCLMA_RS07675 7e015badf0b4373ab2b82bc0632a7e5d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 374 388 5.1E-30 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VCLMA_RS07675 7e015badf0b4373ab2b82bc0632a7e5d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 392 408 5.1E-30 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VCLMA_RS07675 7e015badf0b4373ab2b82bc0632a7e5d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 97 115 5.1E-30 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VCLMA_RS07675 7e015badf0b4373ab2b82bc0632a7e5d 818 PRINTS PR00931 Microbial collagenase metalloprotease (M9) signature 458 473 5.1E-30 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VCLMA_RS07675 7e015badf0b4373ab2b82bc0632a7e5d 818 Pfam PF01752 Collagenase 272 558 1.8E-111 T 22-04-2016 IPR002169 Peptidase M9A/M9B, collagenase, bacterial GO:0004252|GO:0005576|GO:0006508|GO:0008270 VCLMA_RS07675 7e015badf0b4373ab2b82bc0632a7e5d 818 PANTHER PTHR13062 1 818 1.8E-203 T 22-04-2016 VCLMA_RS07675 7e015badf0b4373ab2b82bc0632a7e5d 818 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 614 685 2.1E-7 T 22-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial VCLMA_RS07675 7e015badf0b4373ab2b82bc0632a7e5d 818 Pfam PF08453 Peptidase family M9 N-terminal 31 210 6.5E-49 T 22-04-2016 IPR013661 Peptidase M9, collagenase, N-terminal domain VCLMA_RS02630 feb9017cdb887afde3cb48797c721215 395 PIRSF PIRSF000726 59 386 1.6E-77 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS02630 feb9017cdb887afde3cb48797c721215 395 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS02630 feb9017cdb887afde3cb48797c721215 395 PANTHER PTHR21499 1 390 9.8E-152 T 22-04-2016 VCLMA_RS02630 feb9017cdb887afde3cb48797c721215 395 Pfam PF00696 Amino acid kinase family 5 231 6.1E-54 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS02630 feb9017cdb887afde3cb48797c721215 395 SUPERFAMILY SSF53633 6 242 5.63E-76 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS02630 feb9017cdb887afde3cb48797c721215 395 PANTHER PTHR21499:SF27 1 390 9.8E-152 T 22-04-2016 VCLMA_RS02630 feb9017cdb887afde3cb48797c721215 395 Gene3D G3DSA:3.40.1160.10 4 244 2.3E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS02630 feb9017cdb887afde3cb48797c721215 395 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 59 379 7.0E-80 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS02630 feb9017cdb887afde3cb48797c721215 395 SUPERFAMILY SSF55021 315 383 7.85E-5 T 22-04-2016 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 SUPERFAMILY SSF55785 193 300 7.59E-26 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 Gene3D G3DSA:3.30.450.20 78 176 4.1E-14 T 22-04-2016 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 Gene3D G3DSA:3.30.450.20 193 298 2.0E-22 T 22-04-2016 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 194 304 3.4E-15 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 77 178 5.8E-7 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 Pfam PF08447 PAS fold 207 292 1.1E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 SUPERFAMILY SSF55785 77 175 4.58E-11 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 SUPERFAMILY SSF58104 317 598 4.05E-72 T 22-04-2016 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 412 596 2.4E-59 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 PANTHER PTHR32089:SF63 304 600 1.9E-150 T 22-04-2016 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 SMART SM00086 134 177 22.0 T 22-04-2016 IPR001610 PAC motif VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 SMART SM00086 257 299 0.025 T 22-04-2016 IPR001610 PAC motif VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 Pfam PF08448 PAS fold 77 178 1.7E-10 T 22-04-2016 IPR013656 PAS fold-4 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 Gene3D G3DSA:1.10.287.950 365 569 4.3E-60 T 22-04-2016 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 475 4.1E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 400 4.1E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 477 506 4.1E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 525 554 4.1E-54 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 SMART SM00091 184 252 0.017 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 SMART SM00091 63 131 2.6 T 22-04-2016 IPR000014 PAS domain VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 PANTHER PTHR32089 304 600 1.9E-150 T 22-04-2016 VCLMA_RS00505 723b0fbc743e5f2475675eac3443915f 659 SMART SM00283 350 597 1.0E-82 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS03755 69641443d0c2153abb3deae7c57d1de4 393 Pfam PF00425 chorismate binding enzyme 121 375 1.8E-70 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VCLMA_RS03755 69641443d0c2153abb3deae7c57d1de4 393 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 100 382 2.1E-83 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VCLMA_RS03755 69641443d0c2153abb3deae7c57d1de4 393 SUPERFAMILY SSF56322 19 385 1.27E-90 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VCLMA_RS03755 69641443d0c2153abb3deae7c57d1de4 393 PANTHER PTHR11236:SF21 86 386 1.0E-177 T 22-04-2016 VCLMA_RS03755 69641443d0c2153abb3deae7c57d1de4 393 PANTHER PTHR11236 86 386 1.0E-177 T 22-04-2016 VCLMA_RS03755 69641443d0c2153abb3deae7c57d1de4 393 Gene3D G3DSA:3.60.120.10 103 384 1.1E-81 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VCLMA_RS02590 204ed190a0b92411e8e28b1f7951a731 333 PANTHER PTHR30368:SF1 1 333 5.9E-242 T 22-04-2016 VCLMA_RS02590 204ed190a0b92411e8e28b1f7951a731 333 Gene3D G3DSA:3.40.190.10 23 163 7.5E-44 T 22-04-2016 VCLMA_RS02590 204ed190a0b92411e8e28b1f7951a731 333 Gene3D G3DSA:3.40.190.10 173 299 2.3E-24 T 22-04-2016 VCLMA_RS02590 204ed190a0b92411e8e28b1f7951a731 333 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 21 330 4.6E-135 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 VCLMA_RS02590 204ed190a0b92411e8e28b1f7951a731 333 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 148 156 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 VCLMA_RS02590 204ed190a0b92411e8e28b1f7951a731 333 SUPERFAMILY SSF53850 22 330 5.05E-72 T 22-04-2016 VCLMA_RS02590 204ed190a0b92411e8e28b1f7951a731 333 PANTHER PTHR30368 1 333 5.9E-242 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 VCLMA_RS02590 204ed190a0b92411e8e28b1f7951a731 333 Pfam PF13531 Bacterial extracellular solute-binding protein 45 284 7.5E-37 T 22-04-2016 VCLMA_RS13820 a93d96d11a719718277c7315d8cd775f 311 SUPERFAMILY SSF52540 178 310 4.26E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS13820 a93d96d11a719718277c7315d8cd775f 311 SUPERFAMILY SSF90123 6 169 7.98E-25 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS13820 a93d96d11a719718277c7315d8cd775f 311 Gene3D G3DSA:1.20.1560.10 8 155 6.5E-18 T 22-04-2016 VCLMA_RS13820 a93d96d11a719718277c7315d8cd775f 311 Gene3D G3DSA:3.40.50.300 186 309 2.3E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS13820 a93d96d11a719718277c7315d8cd775f 311 PANTHER PTHR24221:SF203 1 310 3.8E-207 T 22-04-2016 VCLMA_RS13820 a93d96d11a719718277c7315d8cd775f 311 PANTHER PTHR24221 1 310 3.8E-207 T 22-04-2016 VCLMA_RS13820 a93d96d11a719718277c7315d8cd775f 311 Pfam PF00664 ABC transporter transmembrane region 11 134 2.5E-7 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS13820 a93d96d11a719718277c7315d8cd775f 311 Pfam PF00005 ABC transporter 203 304 9.2E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 SMART SM00448 182 302 5.7E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 Pfam PF01584 CheW-like domain 21 155 4.8E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 Gene3D G3DSA:3.40.50.2300 182 306 4.8E-28 T 22-04-2016 VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 SUPERFAMILY SSF50341 16 157 2.09E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 SUPERFAMILY SSF52172 183 306 1.57E-26 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 Pfam PF00072 Response regulator receiver domain 184 302 4.8E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 PANTHER PTHR22617 1 169 1.2E-112 T 22-04-2016 VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 PANTHER PTHR22617:SF30 1 169 1.2E-112 T 22-04-2016 VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 Gene3D G3DSA:2.30.30.40 86 144 9.9E-5 T 22-04-2016 VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 PIRSF PIRSF002867 1 308 5.2E-103 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV VCLMA_RS10220 e7dfc48e5aba5881bae0aa00bc69fe04 308 SMART SM00260 17 153 4.3E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 Gene3D G3DSA:2.40.50.140 16 88 2.5E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 Gene3D G3DSA:3.40.50.150 258 437 6.8E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 69.196 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 2.3E-130 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 101 438 1.5E-32 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 SUPERFAMILY SSF53335 76 438 4.22E-81 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 Pfam PF01938 TRAM domain 17 68 2.1E-9 T 22-04-2016 IPR002792 TRAM domain VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 SUPERFAMILY SSF50249 17 74 5.54E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 PANTHER PTHR11061:SF30 20 440 4.5E-136 T 22-04-2016 VCLMA_RS11355 74e619913bc6c8d0486d88d696c77d16 440 PANTHER PTHR11061 20 440 4.5E-136 T 22-04-2016 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 Gene3D G3DSA:3.20.20.370 22 97 4.2E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 Gene3D G3DSA:3.20.20.370 166 335 4.2E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 PANTHER PTHR10587 28 97 2.6E-12 T 22-04-2016 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 SMART SM00495 332 378 2.5E-4 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 SMART SM00495 381 427 4.8 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 Pfam PF02839 Carbohydrate binding domain 333 375 3.0E-7 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 SUPERFAMILY SSF51055 334 377 4.45E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 Pfam PF01522 Polysaccharide deacetylase 23 131 5.3E-15 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 SUPERFAMILY SSF88713 22 102 4.45E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 SUPERFAMILY SSF88713 130 147 4.45E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 SUPERFAMILY SSF88713 190 334 4.45E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 Gene3D G3DSA:2.10.10.20 336 377 9.1E-18 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 Gene3D G3DSA:2.10.10.20 383 426 2.1E-16 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS06040 c76a7e7e8907c2f30ed4e154cbf3b726 427 SUPERFAMILY SSF51055 383 426 4.71E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS03095 9d40c4697baee02210de36a4e8182725 209 Gene3D G3DSA:3.40.50.150 1 208 2.2E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS03095 9d40c4697baee02210de36a4e8182725 209 PANTHER PTHR10920 1 209 3.0E-138 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VCLMA_RS03095 9d40c4697baee02210de36a4e8182725 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 2.9E-56 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VCLMA_RS03095 9d40c4697baee02210de36a4e8182725 209 PANTHER PTHR10920:SF20 1 209 3.0E-138 T 22-04-2016 VCLMA_RS03095 9d40c4697baee02210de36a4e8182725 209 SUPERFAMILY SSF53335 30 209 1.7E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS03095 9d40c4697baee02210de36a4e8182725 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 29.399 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VCLMA_RS03095 9d40c4697baee02210de36a4e8182725 209 PIRSF PIRSF005461 1 209 5.2E-80 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 VCLMA_RS05420 e88fd1cf9026fb1e1f9fd5e30e6ad823 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 151 299 1.0E-78 T 22-04-2016 IPR005642 Lysine exporter LysO VCLMA_RS05420 e88fd1cf9026fb1e1f9fd5e30e6ad823 301 PANTHER PTHR35804:SF1 2 301 6.4E-98 T 22-04-2016 VCLMA_RS05420 e88fd1cf9026fb1e1f9fd5e30e6ad823 301 PANTHER PTHR35804 2 301 6.4E-98 T 22-04-2016 VCLMA_RS05420 e88fd1cf9026fb1e1f9fd5e30e6ad823 301 Pfam PF03956 Membrane protein of unknown function (DUF340) 112 297 3.9E-55 T 22-04-2016 IPR005642 Lysine exporter LysO VCLMA_RS12010 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Gene3D G3DSA:3.30.420.100 24 117 5.3E-35 T 22-04-2016 VCLMA_RS12010 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.505 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12010 e2fa128cc17694ea2a1ebda4dc76d4e2 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 1.3E-43 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12010 e2fa128cc17694ea2a1ebda4dc76d4e2 117 SUPERFAMILY SSF53137 3 115 7.41E-51 T 22-04-2016 VCLMA_RS12010 e2fa128cc17694ea2a1ebda4dc76d4e2 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 9.8E-43 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12010 e2fa128cc17694ea2a1ebda4dc76d4e2 117 PANTHER PTHR12899 1 117 5.5E-47 T 22-04-2016 VCLMA_RS00050 de68a98384b6766251268e835fd62b5e 248 Gene3D G3DSA:3.40.190.10 22 100 2.3E-35 T 22-04-2016 VCLMA_RS00050 de68a98384b6766251268e835fd62b5e 248 Gene3D G3DSA:3.40.190.10 204 247 2.3E-35 T 22-04-2016 VCLMA_RS00050 de68a98384b6766251268e835fd62b5e 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VCLMA_RS00050 de68a98384b6766251268e835fd62b5e 248 SMART SM00062 24 245 1.8E-72 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS00050 de68a98384b6766251268e835fd62b5e 248 PANTHER PTHR18966 24 246 3.3E-124 T 22-04-2016 VCLMA_RS00050 de68a98384b6766251268e835fd62b5e 248 Gene3D G3DSA:3.40.190.10 101 200 1.9E-28 T 22-04-2016 VCLMA_RS00050 de68a98384b6766251268e835fd62b5e 248 SUPERFAMILY SSF53850 1 246 6.21E-59 T 22-04-2016 VCLMA_RS00050 de68a98384b6766251268e835fd62b5e 248 PANTHER PTHR18966:SF205 24 246 3.3E-124 T 22-04-2016 VCLMA_RS00050 de68a98384b6766251268e835fd62b5e 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 243 1.8E-56 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS12715 4c271132eb496e41581dac28d302ceb0 194 Pfam PF12019 Type II transport protein GspH 42 181 2.5E-9 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12715 4c271132eb496e41581dac28d302ceb0 194 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 1.7E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS12715 4c271132eb496e41581dac28d302ceb0 194 SUPERFAMILY SSF54523 7 83 7.46E-8 T 22-04-2016 VCLMA_RS12715 4c271132eb496e41581dac28d302ceb0 194 Gene3D G3DSA:3.55.40.10 37 193 4.5E-53 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12715 4c271132eb496e41581dac28d302ceb0 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 145 160 3.9E-22 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12715 4c271132eb496e41581dac28d302ceb0 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 3.9E-22 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12715 4c271132eb496e41581dac28d302ceb0 194 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 3.9E-22 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12715 4c271132eb496e41581dac28d302ceb0 194 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS11980 9e39e2df7f54c6cba7a37a876bbb32f9 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS11980 9e39e2df7f54c6cba7a37a876bbb32f9 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.4E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11980 9e39e2df7f54c6cba7a37a876bbb32f9 118 PANTHER PTHR10871 2 118 3.6E-68 T 22-04-2016 VCLMA_RS11980 9e39e2df7f54c6cba7a37a876bbb32f9 118 Gene3D G3DSA:1.10.8.50 2 71 3.9E-28 T 22-04-2016 VCLMA_RS11980 9e39e2df7f54c6cba7a37a876bbb32f9 118 PIRSF PIRSF002134 1 118 2.1E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11980 9e39e2df7f54c6cba7a37a876bbb32f9 118 SUPERFAMILY SSF46946 2 114 3.68E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VCLMA_RS11980 9e39e2df7f54c6cba7a37a876bbb32f9 118 Gene3D G3DSA:4.10.910.10 72 118 3.5E-27 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal VCLMA_RS11980 9e39e2df7f54c6cba7a37a876bbb32f9 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.709 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11980 9e39e2df7f54c6cba7a37a876bbb32f9 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.9E-32 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:3.30.420.40 195 228 1.6E-32 T 22-04-2016 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:3.30.420.40 318 360 1.6E-32 T 22-04-2016 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PANTHER PTHR19375 2 634 0.0 T 22-04-2016 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 SUPERFAMILY SSF53067 186 381 7.13E-67 T 22-04-2016 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 197 207 7.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 468 484 7.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 364 384 7.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 137 157 7.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 53 61 7.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 333 349 7.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PRINTS PR00301 70kDa heat shock protein signature 387 406 7.1E-79 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 SUPERFAMILY SSF100934 534 608 3.45E-5 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:2.60.34.10 389 530 9.3E-70 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 630 36.452 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Pfam PF00012 Hsp70 protein 4 601 3.1E-264 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:1.20.1270.10 531 600 1.4E-24 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:3.30.420.40 118 194 5.8E-65 T 22-04-2016 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:3.30.420.40 4 52 5.8E-65 T 22-04-2016 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 8.4E-288 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:3.90.640.10 229 314 3.0E-32 T 22-04-2016 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 SUPERFAMILY SSF53067 1 182 2.36E-66 T 22-04-2016 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 SUPERFAMILY SSF100920 383 539 1.12E-59 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 PANTHER PTHR19375:SF173 2 634 0.0 T 22-04-2016 VCLMA_RS04005 baf3eec798fe6db1a24b755a2fb102b2 635 Gene3D G3DSA:3.30.30.30 53 106 2.6E-29 T 22-04-2016 VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 PANTHER PTHR11624 241 626 0.0 T 22-04-2016 IPR033247 Transketolase family VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 Pfam PF02780 Transketolase, C-terminal domain 506 616 2.4E-27 T 22-04-2016 IPR033248 Transketolase, C-terminal domain VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 Gene3D G3DSA:3.40.50.970 335 495 1.1E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 PANTHER PTHR11624:SF20 241 626 0.0 T 22-04-2016 VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 SMART SM00861 319 483 4.8E-64 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 4.3E-119 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 SUPERFAMILY SSF52922 492 624 1.02E-29 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 Gene3D G3DSA:3.40.50.920 496 624 1.4E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 625 45.901 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 SUPERFAMILY SSF52518 8 199 3.63E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 SUPERFAMILY SSF52518 243 381 3.63E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 SUPERFAMILY SSF52518 317 503 1.74E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 Pfam PF02779 Transketolase, pyrimidine binding domain 318 479 5.9E-38 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 624 1.7E-301 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 Gene3D G3DSA:3.40.50.970 26 201 6.6E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 Gene3D G3DSA:3.40.50.970 242 334 6.6E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS04160 ce0f7cde976aa0bff35962fe7c41dff5 626 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VCLMA_RS03765 5599863b9a63b3edb96beca59ce7f0ad 436 SUPERFAMILY SSF52777 177 418 1.45E-28 T 22-04-2016 VCLMA_RS03765 5599863b9a63b3edb96beca59ce7f0ad 436 SUPERFAMILY SSF52777 4 170 1.41E-28 T 22-04-2016 VCLMA_RS03765 5599863b9a63b3edb96beca59ce7f0ad 436 Pfam PF00668 Condensation domain 4 281 2.4E-32 T 22-04-2016 IPR001242 Condensation domain VCLMA_RS03765 5599863b9a63b3edb96beca59ce7f0ad 436 PANTHER PTHR24095 375 424 2.9E-47 T 22-04-2016 VCLMA_RS03765 5599863b9a63b3edb96beca59ce7f0ad 436 PANTHER PTHR24095 1 353 2.9E-47 T 22-04-2016 VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 Gene3D G3DSA:3.60.15.10 444 672 1.1E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 Pfam PF03772 Competence protein 170 426 5.0E-57 T 22-04-2016 IPR004477 ComEC/Rec2-related protein VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 PANTHER PTHR30619 1 705 1.2E-238 T 22-04-2016 VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 Pfam PF00753 Metallo-beta-lactamase superfamily 461 640 3.5E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 PANTHER PTHR30619:SF2 1 705 1.2E-238 T 22-04-2016 VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 192 364 1.8E-24 T 22-04-2016 IPR004477 ComEC/Rec2-related protein VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 SMART SM00849 463 646 1.9E-12 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 Pfam PF13567 Domain of unknown function (DUF4131) 7 134 5.0E-9 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 SUPERFAMILY SSF56281 454 690 2.44E-44 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS08630 032ab70a1b08cdf826681b851e448e5c 709 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 89 675 7.7E-122 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VCLMA_RS06570 3492fe1932eb26b26c275e18b10411e9 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 4.7E-25 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 VCLMA_RS06570 3492fe1932eb26b26c275e18b10411e9 104 PANTHER PTHR30561:SF0 1 103 2.1E-44 T 22-04-2016 VCLMA_RS06570 3492fe1932eb26b26c275e18b10411e9 104 SUPERFAMILY SSF103481 5 102 2.48E-18 T 22-04-2016 VCLMA_RS06570 3492fe1932eb26b26c275e18b10411e9 104 PANTHER PTHR30561 1 103 2.1E-44 T 22-04-2016 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.1E-44 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 PANTHER PTHR32071 19 98 4.2E-29 T 22-04-2016 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 27 98 4.1E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.9E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS01395 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 Gene3D G3DSA:3.40.50.720 2 160 6.1E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 1.9E-25 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 PIRSF PIRSF000193 3 270 4.4E-76 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 1.5E-70 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 SUPERFAMILY SSF48179 162 270 2.04E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 Gene3D G3DSA:1.10.3730.10 163 268 1.4E-28 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 6.5E-29 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 PANTHER PTHR11645 1 270 1.3E-110 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 PANTHER PTHR11645:SF0 1 270 1.3E-110 T 22-04-2016 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.711 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 VCLMA_RS02325 7ae5099a437ef2d780079cf2fb466545 272 SUPERFAMILY SSF51735 4 161 2.43E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 PANTHER PTHR32071 1 338 2.3E-236 T 22-04-2016 VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 325 3.8E-163 T 22-04-2016 IPR014317 Transcription activator PspF VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 PANTHER PTHR32071:SF38 1 338 2.3E-236 T 22-04-2016 VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 308 328 3.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 291 308 3.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 SMART SM00382 25 177 4.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 SUPERFAMILY SSF46689 219 325 1.97E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 Pfam PF02954 Bacterial regulatory protein, Fis family 291 325 1.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 Gene3D G3DSA:3.40.50.300 4 175 3.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 SUPERFAMILY SSF52540 5 237 1.46E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 Gene3D G3DSA:1.10.8.60 177 231 1.9E-23 T 22-04-2016 VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 Gene3D G3DSA:1.10.10.60 232 314 5.2E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS07825 340333e9126b7e5241bfe3ccbd9ce3d1 338 Pfam PF00158 Sigma-54 interaction domain 5 168 9.9E-59 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS11885 3bd6f0efbe5fc55b3183fe48e3bf51ad 419 PANTHER PTHR30489:SF2 224 418 1.3E-127 T 22-04-2016 VCLMA_RS11885 3bd6f0efbe5fc55b3183fe48e3bf51ad 419 PANTHER PTHR30489:SF2 1 204 1.3E-127 T 22-04-2016 VCLMA_RS11885 3bd6f0efbe5fc55b3183fe48e3bf51ad 419 Pfam PF02687 FtsX-like permease family 293 410 3.8E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VCLMA_RS11885 3bd6f0efbe5fc55b3183fe48e3bf51ad 419 PANTHER PTHR30489 224 418 1.3E-127 T 22-04-2016 VCLMA_RS11885 3bd6f0efbe5fc55b3183fe48e3bf51ad 419 PANTHER PTHR30489 1 204 1.3E-127 T 22-04-2016 VCLMA_RS11885 3bd6f0efbe5fc55b3183fe48e3bf51ad 419 Pfam PF12704 MacB-like periplasmic core domain 20 207 4.8E-12 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VCLMA_RS12040 506aca06406bb5a23accfbeabd9dcebe 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 8.6E-59 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VCLMA_RS12040 506aca06406bb5a23accfbeabd9dcebe 123 PANTHER PTHR11761 1 123 5.6E-78 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12040 506aca06406bb5a23accfbeabd9dcebe 123 SMART SM01374 1 123 2.8E-86 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12040 506aca06406bb5a23accfbeabd9dcebe 123 Gene3D G3DSA:2.40.150.20 1 123 7.9E-56 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12040 506aca06406bb5a23accfbeabd9dcebe 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 2.3E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12040 506aca06406bb5a23accfbeabd9dcebe 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site VCLMA_RS12040 506aca06406bb5a23accfbeabd9dcebe 123 SUPERFAMILY SSF50193 2 122 6.67E-52 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12040 506aca06406bb5a23accfbeabd9dcebe 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.195 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 PANTHER PTHR11963 7 497 1.2E-263 T 22-04-2016 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.609 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 3.2E-119 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.4E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 SUPERFAMILY SSF53187 180 495 1.73E-125 T 22-04-2016 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 Gene3D G3DSA:3.40.220.10 1 161 4.5E-67 T 22-04-2016 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 PANTHER PTHR11963:SF13 7 497 1.2E-263 T 22-04-2016 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 SUPERFAMILY SSF52949 1 184 1.24E-50 T 22-04-2016 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 Gene3D G3DSA:3.40.630.10 171 495 3.2E-139 T 22-04-2016 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 1.5E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 1.5E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 1.5E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 1.5E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 1.5E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VCLMA_RS11630 d42b25b493854ec95192248eca060f45 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 140 9.1E-35 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 SUPERFAMILY SSF53738 266 370 1.77E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 Gene3D G3DSA:3.30.310.50 379 460 1.8E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 SUPERFAMILY SSF53738 156 264 7.85E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 382 458 1.1E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 266 371 5.6E-22 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 Gene3D G3DSA:3.40.120.10 175 257 7.3E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 Gene3D G3DSA:3.40.120.10 258 371 7.6E-38 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 PANTHER PTHR22573 7 462 1.1E-195 T 22-04-2016 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 SUPERFAMILY SSF53738 5 179 5.1E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 241 256 1.2E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 1.2E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 1.2E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 212 225 1.2E-29 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 PANTHER PTHR22573:SF18 7 462 1.1E-195 T 22-04-2016 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 SUPERFAMILY SSF55957 377 460 9.94E-18 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 261 3.5E-23 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS01165 c8fa3ca17f4ec18e1e537aea0d9d44b0 463 Gene3D G3DSA:3.40.120.10 7 146 4.8E-37 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 114 387 64.393 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 SMART SM00382 185 365 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 SUPERFAMILY SSF52540 182 387 1.04E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 Pfam PF00448 SRP54-type protein, GTPase domain 187 386 7.0E-78 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 Gene3D G3DSA:1.20.120.140 94 176 1.8E-33 T 22-04-2016 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 PANTHER PTHR11564:SF16 81 390 3.2E-152 T 22-04-2016 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 360 373 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 SMART SM00962 186 387 2.4E-123 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 Pfam PF02881 SRP54-type protein, helical bundle domain 106 167 3.5E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 SMART SM00963 91 171 4.2E-26 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 PANTHER PTHR11564 81 390 3.2E-152 T 22-04-2016 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 Gene3D G3DSA:3.40.50.300 182 387 1.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 SUPERFAMILY SSF47364 86 165 1.83E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS00725 6ab4f7e42bc5ca2c58e64f9725967d4f 390 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 114 386 1.5E-115 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 SUPERFAMILY SSF53597 149 360 6.38E-55 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 358 1.5E-128 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 SUPERFAMILY SSF53927 8 150 9.97E-47 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 PIRSF PIRSF006769 3 366 5.1E-122 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 PANTHER PTHR11079 3 248 2.6E-68 T 22-04-2016 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 Gene3D G3DSA:3.40.140.10 7 133 9.0E-33 T 22-04-2016 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 PANTHER PTHR11079:SF10 3 248 2.6E-68 T 22-04-2016 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 Gene3D G3DSA:3.40.430.10 134 361 3.1E-65 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 Pfam PF01872 RibD C-terminal domain 152 356 3.2E-48 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 361 8.1E-58 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VCLMA_RS10545 c3d1d05e2cc577910a00423a4019401c 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 104 9.1E-19 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VCLMA_RS05345 044a26f63eedc1b78e9bdfe631891198 203 PANTHER PTHR21235 4 202 4.6E-86 T 22-04-2016 VCLMA_RS05345 044a26f63eedc1b78e9bdfe631891198 203 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 203 33.978 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VCLMA_RS05345 044a26f63eedc1b78e9bdfe631891198 203 Gene3D G3DSA:3.40.50.880 2 203 5.3E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS05345 044a26f63eedc1b78e9bdfe631891198 203 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 202 4.0E-68 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VCLMA_RS05345 044a26f63eedc1b78e9bdfe631891198 203 PANTHER PTHR21235:SF1 4 202 4.6E-86 T 22-04-2016 VCLMA_RS05345 044a26f63eedc1b78e9bdfe631891198 203 SUPERFAMILY SSF52317 5 202 5.02E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS05345 044a26f63eedc1b78e9bdfe631891198 203 Pfam PF00117 Glutamine amidotransferase class-I 7 201 6.3E-18 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VCLMA_RS05345 044a26f63eedc1b78e9bdfe631891198 203 PIRSF PIRSF000495 3 203 1.7E-64 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Pfam PF12836 Helix-hairpin-helix motif 491 555 3.8E-29 T 22-04-2016 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Pfam PF09371 Tex-like protein N-terminal domain 9 193 1.1E-71 T 22-04-2016 IPR018974 Tex-like protein, N-terminal VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Gene3D G3DSA:1.10.10.650 2 109 4.8E-47 T 22-04-2016 IPR023319 Tex-like protein, HTH domain VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Pfam PF16921 Tex protein YqgF-like domain 327 451 6.9E-56 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Gene3D G3DSA:2.40.50.140 633 720 3.4E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 SMART SM00316 649 720 3.5E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Gene3D G3DSA:3.30.420.140 327 450 1.2E-52 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 PANTHER PTHR10724:SF1 1 761 0.0 T 22-04-2016 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 SUPERFAMILY SSF47781 560 632 1.96E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 SUPERFAMILY SSF53098 322 469 4.55E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Gene3D G3DSA:1.10.150.310 499 630 1.2E-47 T 22-04-2016 IPR023097 Tex RuvX-like domain VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Pfam PF00575 S1 RNA binding domain 648 720 6.1E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 SUPERFAMILY SSF47781 470 557 3.22E-28 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 SUPERFAMILY SSF50249 640 720 3.06E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Gene3D G3DSA:1.10.3500.10 451 498 1.0E-101 T 22-04-2016 IPR023323 Tex-like domain VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 Gene3D G3DSA:1.10.3500.10 110 322 1.0E-101 T 22-04-2016 IPR023323 Tex-like domain VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 SUPERFAMILY SSF158832 4 321 1.31E-121 T 22-04-2016 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 PANTHER PTHR10724 1 761 0.0 T 22-04-2016 VCLMA_RS12650 8dc072ddbb5c41c4dbcd68f663a32882 773 SMART SM00732 326 424 1.6E-39 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 Pfam PF12431 Transcriptional regulator 133 159 8.1E-9 T 22-04-2016 IPR028141 Transcriptional regulator VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 PANTHER PTHR26402:SF522 201 219 2.5E-53 T 22-04-2016 VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 PANTHER PTHR26402:SF522 3 134 2.5E-53 T 22-04-2016 VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 Pfam PF00072 Response regulator receiver domain 6 116 1.3E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 Gene3D G3DSA:3.40.50.2300 2 129 5.9E-29 T 22-04-2016 VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 SUPERFAMILY SSF52172 3 184 1.57E-33 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 PIRSF PIRSF006171 1 226 6.7E-83 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 PANTHER PTHR26402 201 219 2.5E-53 T 22-04-2016 VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 PANTHER PTHR26402 3 134 2.5E-53 T 22-04-2016 VCLMA_RS07450 7a5773f64b3aa96476ed8f96ca353bc2 228 SMART SM00448 3 116 1.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 SUPERFAMILY SSF53784 3 315 4.84E-114 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 Gene3D G3DSA:3.40.50.450 2 215 2.5E-75 T 22-04-2016 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 6.6E-84 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 6.6E-84 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 6.6E-84 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 6.6E-84 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 6.6E-84 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 6.6E-84 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 6.6E-84 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 6.6E-84 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 6.6E-84 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 4.6E-131 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PIRSF PIRSF000532 1 320 1.1E-129 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.523 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 PANTHER PTHR13697 2 309 2.2E-138 T 22-04-2016 VCLMA_RS12515 5430897e0ba2aa5c01f9cab4fbcc1660 320 Pfam PF00365 Phosphofructokinase 4 276 8.8E-110 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS12230 21698294b26c717480f338eef7427c80 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 2.8E-91 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VCLMA_RS12230 21698294b26c717480f338eef7427c80 224 SUPERFAMILY SSF51366 4 218 2.47E-76 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VCLMA_RS12230 21698294b26c717480f338eef7427c80 224 Gene3D G3DSA:3.20.20.70 2 222 2.4E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS12230 21698294b26c717480f338eef7427c80 224 PANTHER PTHR11749 2 222 1.6E-132 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VCLMA_RS12230 21698294b26c717480f338eef7427c80 224 PANTHER PTHR11749:SF7 2 222 1.6E-132 T 22-04-2016 VCLMA_RS12230 21698294b26c717480f338eef7427c80 224 PIRSF PIRSF001461 1 224 2.2E-106 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VCLMA_RS12230 21698294b26c717480f338eef7427c80 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 1.6E-99 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VCLMA_RS12230 21698294b26c717480f338eef7427c80 224 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VCLMA_RS12230 21698294b26c717480f338eef7427c80 224 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 VCLMA_RS04725 a5dc0662d2b678a3db34246145684e86 145 Pfam PF10952 Protein of unknown function (DUF2753) 6 145 2.0E-79 T 22-04-2016 IPR020206 Uncharacterised protein family, VP2110 VCLMA_RS04725 a5dc0662d2b678a3db34246145684e86 145 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 144 7.0E-81 T 22-04-2016 IPR020206 Uncharacterised protein family, VP2110 VCLMA_RS03210 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 Gene3D G3DSA:3.40.630.30 3 146 2.5E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS03210 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 PANTHER PTHR23091 1 144 8.9E-34 T 22-04-2016 VCLMA_RS03210 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 PANTHER PTHR23091:SF247 1 144 8.9E-34 T 22-04-2016 VCLMA_RS03210 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 144 4.3E-39 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 VCLMA_RS03210 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 SUPERFAMILY SSF55729 1 146 1.89E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS03210 3833f7ef1deb07bbbb53ef8fb52f8ec9 149 Pfam PF00583 Acetyltransferase (GNAT) family 49 121 1.5E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 SUPERFAMILY SSF51306 77 297 2.51E-70 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 PANTHER PTHR12383 213 275 2.8E-110 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 PANTHER PTHR12383 3 190 2.8E-110 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 Gene3D G3DSA:2.10.109.10 231 272 3.0E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 Gene3D G3DSA:2.10.109.10 75 152 3.0E-56 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 Gene3D G3DSA:2.170.230.10 153 230 7.0E-19 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 PANTHER PTHR12383:SF27 213 275 2.8E-110 T 22-04-2016 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 PANTHER PTHR12383:SF27 3 190 2.8E-110 T 22-04-2016 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 8.5E-27 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 8.5E-27 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 8.5E-27 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 Pfam PF00717 Peptidase S24-like 85 161 2.5E-21 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 Pfam PF10502 Signal peptidase, peptidase S26 228 268 1.6E-6 T 22-04-2016 IPR019533 Peptidase S26 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 271 4.4E-48 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VCLMA_RS11405 459a291734a5a64234f01c63a17854fc 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 SMART SM01382 124 252 2.2E-91 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 SMART SM01383 42 118 4.0E-47 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 Gene3D G3DSA:4.10.950.10 196 273 2.2E-35 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 SUPERFAMILY SSF50249 2 125 1.37E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 PANTHER PTHR13691 1 274 1.6E-148 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 PIRSF PIRSF002158 13 274 2.9E-102 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.8E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 5.0E-34 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.088 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 Gene3D G3DSA:2.30.30.30 119 195 2.9E-33 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 Gene3D G3DSA:2.40.50.140 1 114 7.8E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 SUPERFAMILY SSF50104 127 272 6.02E-61 T 22-04-2016 IPR008991 Translation protein SH3-like domain VCLMA_RS12075 08a4d6a029e78e6bbbdcd496755b03ee 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.4E-131 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VCLMA_RS06640 fb6e88c6713a37167434ab00fcd8dc48 200 PANTHER PTHR30055:SF76 1 197 9.7E-78 T 22-04-2016 VCLMA_RS06640 fb6e88c6713a37167434ab00fcd8dc48 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 5.9E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS06640 fb6e88c6713a37167434ab00fcd8dc48 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 5.9E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS06640 fb6e88c6713a37167434ab00fcd8dc48 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.9E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS06640 fb6e88c6713a37167434ab00fcd8dc48 200 PANTHER PTHR30055 1 197 9.7E-78 T 22-04-2016 VCLMA_RS06640 fb6e88c6713a37167434ab00fcd8dc48 200 SUPERFAMILY SSF46689 1 70 2.54E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS06640 fb6e88c6713a37167434ab00fcd8dc48 200 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 143 197 3.8E-9 T 22-04-2016 VCLMA_RS06640 fb6e88c6713a37167434ab00fcd8dc48 200 Gene3D G3DSA:1.10.357.10 54 199 3.7E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS06640 fb6e88c6713a37167434ab00fcd8dc48 200 Gene3D G3DSA:1.10.10.60 1 53 4.8E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Gene3D G3DSA:1.10.730.10 631 817 1.2E-60 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PANTHER PTHR11946:SF5 608 862 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PANTHER PTHR11946:SF5 882 946 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PANTHER PTHR11946:SF5 1 314 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PANTHER PTHR11946:SF5 333 570 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Gene3D G3DSA:3.40.50.620 364 571 1.8E-142 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Gene3D G3DSA:3.40.50.620 3 193 1.8E-142 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Gene3D G3DSA:3.40.50.620 609 630 1.8E-142 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 SUPERFAMILY SSF46589 886 950 8.89E-18 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PANTHER PTHR11946 608 862 0.0 T 22-04-2016 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PANTHER PTHR11946 882 946 0.0 T 22-04-2016 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PANTHER PTHR11946 1 314 0.0 T 22-04-2016 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PANTHER PTHR11946 333 570 0.0 T 22-04-2016 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 946 3.6E-18 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.3E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Gene3D G3DSA:3.90.740.10 194 360 5.5E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 SUPERFAMILY SSF50677 190 365 1.44E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 933 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Pfam PF08264 Anticodon-binding domain of tRNA 675 827 9.2E-40 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 SUPERFAMILY SSF52374 364 571 1.83E-137 T 22-04-2016 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 SUPERFAMILY SSF52374 1 192 1.83E-137 T 22-04-2016 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 SUPERFAMILY SSF52374 609 641 1.83E-137 T 22-04-2016 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.1E-220 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Gene3D G3DSA:1.10.287.380 880 940 1.5E-5 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 951 16.058 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 VCLMA_RS11640 65618fb1424d5804a2dadc76511bdaca 953 SUPERFAMILY SSF47323 642 900 8.78E-68 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 SUPERFAMILY SSF53597 1 160 1.03E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 PIRSF PIRSF000194 1 162 6.6E-63 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 PANTHER PTHR22778 1 160 1.9E-46 T 22-04-2016 VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 PANTHER PTHR22778:SF16 1 160 1.9E-46 T 22-04-2016 VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 PRINTS PR00070 Dihydrofolate reductase signature 92 106 9.2E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 PRINTS PR00070 Dihydrofolate reductase signature 41 52 9.2E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 PRINTS PR00070 Dihydrofolate reductase signature 28 36 9.2E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 PRINTS PR00070 Dihydrofolate reductase signature 14 24 9.2E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 Pfam PF00186 Dihydrofolate reductase 2 159 7.6E-62 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 VCLMA_RS02215 ca65f1dd81f7b01133cabf44a5a5b3bf 165 Gene3D G3DSA:3.40.430.10 1 160 1.1E-60 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain VCLMA_RS01740 2aa8931a8d9ed84a652892bae41ba8e1 87 PANTHER PTHR34772:SF1 1 87 7.4E-42 T 22-04-2016 VCLMA_RS01740 2aa8931a8d9ed84a652892bae41ba8e1 87 PANTHER PTHR34772 1 87 7.4E-42 T 22-04-2016 VCLMA_RS01740 2aa8931a8d9ed84a652892bae41ba8e1 87 SUPERFAMILY SSF50182 7 69 1.19E-24 T 22-04-2016 IPR010920 LSM domain VCLMA_RS01740 2aa8931a8d9ed84a652892bae41ba8e1 87 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VCLMA_RS01740 2aa8931a8d9ed84a652892bae41ba8e1 87 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.8E-30 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VCLMA_RS01740 2aa8931a8d9ed84a652892bae41ba8e1 87 Gene3D G3DSA:2.30.30.100 1 71 3.3E-38 T 22-04-2016 VCLMA_RS10875 4e38b09b87cdfca40b3e7e9f37902a29 241 PANTHER PTHR21234:SF8 3 235 3.2E-85 T 22-04-2016 VCLMA_RS10875 4e38b09b87cdfca40b3e7e9f37902a29 241 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.1E-119 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VCLMA_RS10875 4e38b09b87cdfca40b3e7e9f37902a29 241 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VCLMA_RS10875 4e38b09b87cdfca40b3e7e9f37902a29 241 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.848 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VCLMA_RS10875 4e38b09b87cdfca40b3e7e9f37902a29 241 Gene3D G3DSA:3.40.50.1580 10 233 1.0E-84 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VCLMA_RS10875 4e38b09b87cdfca40b3e7e9f37902a29 241 SUPERFAMILY SSF53167 3 235 1.7E-94 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VCLMA_RS10875 4e38b09b87cdfca40b3e7e9f37902a29 241 Pfam PF01048 Phosphorylase superfamily 15 222 1.5E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VCLMA_RS10875 4e38b09b87cdfca40b3e7e9f37902a29 241 PANTHER PTHR21234 3 235 3.2E-85 T 22-04-2016 IPR018017 Nucleoside phosphorylase VCLMA_RS07445 374b5fbcd05b5ec974ed8ee5cb8f2e86 258 SUPERFAMILY SSF53850 31 258 7.39E-33 T 22-04-2016 VCLMA_RS07445 374b5fbcd05b5ec974ed8ee5cb8f2e86 258 PANTHER PTHR38834:SF1 1 258 3.3E-125 T 22-04-2016 VCLMA_RS07445 374b5fbcd05b5ec974ed8ee5cb8f2e86 258 Gene3D G3DSA:3.40.190.10 35 153 4.3E-12 T 22-04-2016 VCLMA_RS07445 374b5fbcd05b5ec974ed8ee5cb8f2e86 258 PANTHER PTHR38834 1 258 3.3E-125 T 22-04-2016 VCLMA_RS07445 374b5fbcd05b5ec974ed8ee5cb8f2e86 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 242 5.2E-19 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 Pfam PF01327 Polypeptide deformylase 4 152 8.2E-50 T 22-04-2016 IPR023635 Peptide deformylase VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 SUPERFAMILY SSF56420 3 165 1.96E-62 T 22-04-2016 IPR023635 Peptide deformylase VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 PANTHER PTHR10458:SF10 1 168 6.8E-110 T 22-04-2016 VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.011 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 PIRSF PIRSF004749 1 169 6.1E-57 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 Gene3D G3DSA:3.90.45.10 5 168 1.1E-63 T 22-04-2016 IPR023635 Peptide deformylase VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 PRINTS PR01576 Peptide deformylase signature 33 62 5.8E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 PRINTS PR01576 Peptide deformylase signature 89 100 5.8E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 PRINTS PR01576 Peptide deformylase signature 120 149 5.8E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 PRINTS PR01576 Peptide deformylase signature 101 119 5.8E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 PANTHER PTHR10458 1 168 6.8E-110 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VCLMA_RS00225 a8cb7261fb0ef20e7a118cd685198db5 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 1.1E-61 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 VCLMA_RS10540 7f5ab4bddb3512499328d6ffa45a6468 217 SUPERFAMILY SSF63380 94 198 1.79E-32 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VCLMA_RS10540 7f5ab4bddb3512499328d6ffa45a6468 217 PANTHER PTHR21098 1 217 1.7E-104 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10540 7f5ab4bddb3512499328d6ffa45a6468 217 Pfam PF00677 Lumazine binding domain 3 87 2.4E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10540 7f5ab4bddb3512499328d6ffa45a6468 217 Pfam PF00677 Lumazine binding domain 100 184 7.9E-21 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10540 7f5ab4bddb3512499328d6ffa45a6468 217 PIRSF PIRSF000498 1 211 2.2E-80 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10540 7f5ab4bddb3512499328d6ffa45a6468 217 Gene3D G3DSA:2.40.30.20 104 196 6.8E-32 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS10540 7f5ab4bddb3512499328d6ffa45a6468 217 Gene3D G3DSA:2.40.30.20 5 103 2.1E-30 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS10540 7f5ab4bddb3512499328d6ffa45a6468 217 SUPERFAMILY SSF63380 1 89 1.36E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VCLMA_RS10540 7f5ab4bddb3512499328d6ffa45a6468 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 200 4.0E-66 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 Gene3D G3DSA:3.30.70.141 1 140 5.4E-61 T 22-04-2016 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 PANTHER PTHR11349 1 140 7.5E-79 T 22-04-2016 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.175 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 SMART SM00562 3 140 6.3E-93 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 SUPERFAMILY SSF54919 1 140 6.42E-62 T 22-04-2016 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.7E-58 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.4E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.4E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.4E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.4E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS03670 626995cb91765d4f622203d4718db88e 142 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.4E-38 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 6.3E-261 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.45 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 PANTHER PTHR10937 1 610 0.0 T 22-04-2016 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 Gene3D G3DSA:3.40.50.10490 244 446 1.3E-66 T 22-04-2016 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 Pfam PF13522 Glutamine amidotransferase domain 63 174 3.0E-20 T 22-04-2016 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 Gene3D G3DSA:3.40.50.10490 447 610 3.8E-65 T 22-04-2016 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 Gene3D G3DSA:3.60.20.10 2 237 1.9E-78 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 PANTHER PTHR10937:SF0 1 610 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 Pfam PF01380 SIS domain 290 418 1.8E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 Pfam PF01380 SIS domain 463 592 2.5E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 SUPERFAMILY SSF56235 2 234 2.74E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS02465 c23ea6a024d1f1b5a4c16ed223356726 610 SUPERFAMILY SSF53697 245 610 4.36E-112 T 22-04-2016 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 SUPERFAMILY SSF55347 131 320 1.85E-78 T 22-04-2016 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 Gene3D G3DSA:3.40.50.720 1 143 2.7E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 PANTHER PTHR10174:SF2 48 336 1.2E-91 T 22-04-2016 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 4.2E-33 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 36.581 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 SMART SM00859 6 121 1.9E-43 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 Gene3D G3DSA:3.30.360.10 144 315 1.9E-80 T 22-04-2016 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 1.1E-130 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 PANTHER PTHR10174 48 336 1.2E-91 T 22-04-2016 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 PIRSF PIRSF000148 4 337 1.2E-134 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 2.7E-63 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS09710 660008cd854b50b5d9262b0734f470c5 337 SUPERFAMILY SSF51735 5 159 9.66E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 371 3.3E-9 T 22-04-2016 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 Gene3D G3DSA:3.30.450.20 32 171 1.7E-47 T 22-04-2016 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 SUPERFAMILY SSF55874 391 534 1.83E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 536 4.8E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 Pfam PF00989 PAS fold 217 269 2.7E-6 T 22-04-2016 IPR013767 PAS fold GO:0006355 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 Pfam PF17203 Single cache domain 3 37 168 3.3E-18 T 22-04-2016 IPR033463 Single cache domain 3 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 Gene3D G3DSA:3.30.565.10 389 535 5.8E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 Gene3D G3DSA:1.10.287.130 311 378 1.5E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 Gene3D G3DSA:3.30.450.20 220 310 1.2E-10 T 22-04-2016 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 481 2.5E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 534 2.5E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 2.5E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 221 269 6.4E-7 T 22-04-2016 IPR000014 PAS domain VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 SUPERFAMILY SSF103190 39 169 1.84E-35 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 SUPERFAMILY SSF55785 218 307 2.79E-14 T 22-04-2016 IPR000014 PAS domain VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 PANTHER PTHR24423 88 159 1.7E-130 T 22-04-2016 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 PANTHER PTHR24423 192 537 1.7E-130 T 22-04-2016 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 SUPERFAMILY SSF55890 323 391 1.96E-9 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 SMART SM00387 419 537 9.6E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 PANTHER PTHR24423:SF487 88 159 1.7E-130 T 22-04-2016 VCLMA_RS07455 09fa5423d19329a7349d12a4fed0f878 538 PANTHER PTHR24423:SF487 192 537 1.7E-130 T 22-04-2016 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 PANTHER PTHR23115 1 597 2.1E-301 T 22-04-2016 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF54980 306 391 3.31E-16 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 155 5.9E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 Pfam PF03144 Elongation factor Tu domain 2 223 293 2.4E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:2.40.30.10 210 307 8.2E-27 T 22-04-2016 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:3.30.70.870 308 404 9.2E-39 T 22-04-2016 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF50447 155 303 7.95E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 PANTHER PTHR23115:SF14 1 597 2.1E-301 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF54980 402 516 3.79E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:3.30.70.240 405 484 3.0E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:3.40.50.300 6 209 4.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 Pfam PF00679 Elongation factor G C-terminus 399 481 3.5E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 603 2.7E-296 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 SUPERFAMILY SSF52540 5 211 1.44E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 Gene3D G3DSA:2.40.50.250 487 581 4.2E-40 T 22-04-2016 VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VCLMA_RS12785 9d094560c6522e1e19ebd2d97a51a502 609 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 3.4E-57 T 22-04-2016 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 381 401 1.1E-5 T 22-04-2016 IPR020008 GlyGly-CTERM domain VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 SMART SM00020 32 263 1.2E-67 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 64 79 4.3E-13 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 214 226 4.3E-13 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 121 135 4.3E-13 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 Gene3D G3DSA:2.60.40.360 275 349 5.6E-4 T 22-04-2016 IPR008962 PapD-like VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 SUPERFAMILY SSF50494 21 268 4.99E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 215 226 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 74 79 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 PANTHER PTHR24276 1 273 7.5E-71 T 22-04-2016 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 Gene3D G3DSA:2.40.10.10 70 126 1.1E-18 T 22-04-2016 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 Gene3D G3DSA:2.40.10.10 127 268 5.0E-35 T 22-04-2016 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 Gene3D G3DSA:2.40.10.10 33 69 1.5E-13 T 22-04-2016 VCLMA_RS05650 39f8f1a7e63aa08ee95ab1b47d485888 403 Pfam PF00089 Trypsin 33 263 5.2E-52 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VCLMA_RS01085 b881e444a3ae546128986f6cee8d1096 355 Gene3D G3DSA:3.40.50.2000 164 344 1.2E-50 T 22-04-2016 VCLMA_RS01085 b881e444a3ae546128986f6cee8d1096 355 PANTHER PTHR30160 1 355 8.9E-189 T 22-04-2016 VCLMA_RS01085 b881e444a3ae546128986f6cee8d1096 355 SUPERFAMILY SSF53756 10 343 1.02E-88 T 22-04-2016 VCLMA_RS01085 b881e444a3ae546128986f6cee8d1096 355 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 305 3.7E-53 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VCLMA_RS01085 b881e444a3ae546128986f6cee8d1096 355 Gene3D G3DSA:3.40.50.2000 13 154 4.1E-26 T 22-04-2016 VCLMA_RS01085 b881e444a3ae546128986f6cee8d1096 355 PANTHER PTHR30160:SF12 1 355 8.9E-189 T 22-04-2016 VCLMA_RS03780 67b4cdc5150595fa68c66ca7208105cb 357 Gene3D G3DSA:1.10.3470.10 32 355 2.1E-80 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS03780 67b4cdc5150595fa68c66ca7208105cb 357 PANTHER PTHR30472 6 357 4.1E-181 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS03780 67b4cdc5150595fa68c66ca7208105cb 357 SUPERFAMILY SSF81345 28 352 4.32E-64 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS03780 67b4cdc5150595fa68c66ca7208105cb 357 PANTHER PTHR30472:SF24 6 357 4.1E-181 T 22-04-2016 VCLMA_RS03780 67b4cdc5150595fa68c66ca7208105cb 357 Pfam PF01032 FecCD transport family 44 352 1.6E-71 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS10690 289e9f704a02d7c0f52377ef9ce7d683 226 SUPERFAMILY SSF51182 115 210 5.09E-13 T 22-04-2016 IPR011051 RmlC-like cupin domain VCLMA_RS10690 289e9f704a02d7c0f52377ef9ce7d683 226 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 223 2.8E-93 T 22-04-2016 IPR012807 Anti-sigma factor ChrR, putative VCLMA_RS10690 289e9f704a02d7c0f52377ef9ce7d683 226 Gene3D G3DSA:2.60.120.10 116 210 2.7E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS10690 289e9f704a02d7c0f52377ef9ce7d683 226 Pfam PF13490 Putative zinc-finger 9 37 2.8E-5 T 22-04-2016 IPR027383 Putative zinc-finger VCLMA_RS10690 289e9f704a02d7c0f52377ef9ce7d683 226 Pfam PF12973 ChrR Cupin-like domain 121 200 9.3E-13 T 22-04-2016 IPR025979 ChrR-like cupin domain VCLMA_RS09500 d857db19481f8874cf070ff51f91b9cf 258 Gene3D G3DSA:3.40.50.300 3 248 9.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09500 d857db19481f8874cf070ff51f91b9cf 258 PANTHER PTHR13696:SF69 1 258 9.0E-159 T 22-04-2016 VCLMA_RS09500 d857db19481f8874cf070ff51f91b9cf 258 Pfam PF13614 AAA domain 4 180 2.2E-49 T 22-04-2016 IPR025669 AAA domain VCLMA_RS09500 d857db19481f8874cf070ff51f91b9cf 258 PANTHER PTHR13696 1 258 9.0E-159 T 22-04-2016 VCLMA_RS09500 d857db19481f8874cf070ff51f91b9cf 258 SUPERFAMILY SSF52540 1 252 3.62E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01260 324534f57e417c32d270323d0250ff6a 323 PANTHER PTHR10366:SF329 10 269 2.9E-163 T 22-04-2016 VCLMA_RS01260 324534f57e417c32d270323d0250ff6a 323 PANTHER PTHR10366:SF329 286 320 2.9E-163 T 22-04-2016 VCLMA_RS01260 324534f57e417c32d270323d0250ff6a 323 PANTHER PTHR10366 10 269 2.9E-163 T 22-04-2016 VCLMA_RS01260 324534f57e417c32d270323d0250ff6a 323 PANTHER PTHR10366 286 320 2.9E-163 T 22-04-2016 VCLMA_RS01260 324534f57e417c32d270323d0250ff6a 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 11 233 9.9E-33 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 VCLMA_RS01260 324534f57e417c32d270323d0250ff6a 323 SUPERFAMILY SSF51735 7 320 1.2E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01260 324534f57e417c32d270323d0250ff6a 323 Gene3D G3DSA:3.40.50.720 10 314 5.7E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11835 933c860632897cd358d28701a1222441 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 1.2E-77 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 Gene3D G3DSA:3.30.540.10 5 198 9.3E-80 T 22-04-2016 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 Gene3D G3DSA:3.40.190.80 199 332 5.9E-60 T 22-04-2016 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 43.47 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 SUPERFAMILY SSF56655 2 331 4.51E-114 T 22-04-2016 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 PIRSF PIRSF500210 1 335 1.2E-128 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 PIRSF PIRSF000904 1 335 2.9E-125 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 PANTHER PTHR11556 4 332 7.4E-190 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 3.2E-77 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 3.2E-77 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 3.2E-77 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 3.2E-77 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 3.2E-77 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VCLMA_RS11835 933c860632897cd358d28701a1222441 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 3.2E-77 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 274 399 3.8E-15 T 22-04-2016 IPR000014 PAS domain VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 Gene3D G3DSA:3.30.450.20 266 389 2.4E-21 T 22-04-2016 VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 Pfam PF08448 PAS fold 283 393 5.4E-17 T 22-04-2016 IPR013656 PAS fold-4 VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 Gene3D G3DSA:3.30.70.270 412 577 2.6E-51 T 22-04-2016 VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 SUPERFAMILY SSF55785 149 249 5.93E-7 T 22-04-2016 IPR000014 PAS domain VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 SMART SM00086 350 392 0.0048 T 22-04-2016 IPR001610 PAC motif VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 SMART SM00086 209 251 480.0 T 22-04-2016 IPR001610 PAC motif VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 SMART SM00267 399 575 4.6E-72 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 406 573 1.8E-47 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 PANTHER PTHR10799:SF728 443 570 1.7E-59 T 22-04-2016 VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 PANTHER PTHR10799:SF728 147 279 1.7E-59 T 22-04-2016 VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 Pfam PF00990 Diguanylate cyclase, GGDEF domain 411 571 1.8E-49 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 SUPERFAMILY SSF55785 264 390 2.62E-20 T 22-04-2016 IPR000014 PAS domain VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 Pfam PF13188 PAS domain 40 74 0.0035 T 22-04-2016 IPR000014 PAS domain VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 SUPERFAMILY SSF55073 415 577 2.12E-46 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 Gene3D G3DSA:3.30.450.20 186 265 4.9E-4 T 22-04-2016 VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 PANTHER PTHR10799 443 570 1.7E-59 T 22-04-2016 VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 PANTHER PTHR10799 147 279 1.7E-59 T 22-04-2016 VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 SMART SM00091 36 100 48.0 T 22-04-2016 IPR000014 PAS domain VCLMA_RS10985 435cf082ea26962f55085e2245a00bbd 579 SMART SM00091 277 344 0.0025 T 22-04-2016 IPR000014 PAS domain VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 4.4E-37 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 SUPERFAMILY SSF53901 215 413 7.16E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 2.3E-64 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 PIRSF PIRSF000447 1 414 7.0E-207 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 PANTHER PTHR11712 3 413 3.8E-211 T 22-04-2016 VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 Gene3D G3DSA:3.40.47.10 2 260 7.0E-82 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 Gene3D G3DSA:3.40.47.10 263 413 1.4E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 SMART SM00825 Beta-ketoacyl synthase 6 414 8.8E-17 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 SUPERFAMILY SSF53901 4 252 6.04E-82 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09285 fb090b0abee9f85d44e9cf3cdca8d03c 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 412 2.2E-193 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 VCLMA_RS12130 70a9b98124b69d55ae7f0c2a452e1160 201 Gene3D G3DSA:3.10.50.40 126 140 1.1E-18 T 22-04-2016 VCLMA_RS12130 70a9b98124b69d55ae7f0c2a452e1160 201 Gene3D G3DSA:3.10.50.40 2 80 1.1E-18 T 22-04-2016 VCLMA_RS12130 70a9b98124b69d55ae7f0c2a452e1160 201 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 2.8E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VCLMA_RS12130 70a9b98124b69d55ae7f0c2a452e1160 201 PANTHER PTHR10516:SF316 1 83 2.8E-67 T 22-04-2016 VCLMA_RS12130 70a9b98124b69d55ae7f0c2a452e1160 201 PANTHER PTHR10516:SF316 129 199 2.8E-67 T 22-04-2016 VCLMA_RS12130 70a9b98124b69d55ae7f0c2a452e1160 201 PANTHER PTHR10516 1 83 2.8E-67 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VCLMA_RS12130 70a9b98124b69d55ae7f0c2a452e1160 201 PANTHER PTHR10516 129 199 2.8E-67 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VCLMA_RS12130 70a9b98124b69d55ae7f0c2a452e1160 201 SUPERFAMILY SSF54534 2 140 1.49E-35 T 22-04-2016 VCLMA_RS03310 6c6a4b650beaa41462799be7d4f7eaf7 86 Pfam PF01649 Ribosomal protein S20 2 84 9.8E-29 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03310 6c6a4b650beaa41462799be7d4f7eaf7 86 PANTHER PTHR33398 2 86 6.7E-39 T 22-04-2016 VCLMA_RS03310 6c6a4b650beaa41462799be7d4f7eaf7 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.341 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03310 6c6a4b650beaa41462799be7d4f7eaf7 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 4.0E-36 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03310 6c6a4b650beaa41462799be7d4f7eaf7 86 SUPERFAMILY SSF46992 3 86 2.49E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03310 6c6a4b650beaa41462799be7d4f7eaf7 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 3.4E-31 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03310 6c6a4b650beaa41462799be7d4f7eaf7 86 Gene3D G3DSA:1.20.58.110 1 86 3.9E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.377 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 PANTHER PTHR21327 7 367 1.1E-157 T 22-04-2016 VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 PANTHER PTHR21327:SF6 7 367 1.1E-157 T 22-04-2016 VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 5.5E-85 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 SUPERFAMILY SSF142695 205 367 1.83E-48 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 Gene3D G3DSA:3.90.870.10 2 211 6.6E-101 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 1.1E-75 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 PIRSF PIRSF001259 3 369 4.6E-132 T 22-04-2016 VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 SUPERFAMILY SSF55821 3 202 5.26E-87 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VCLMA_RS10535 373aa5fef652d064d121a6e5698038f0 369 Pfam PF00925 GTP cyclohydrolase II 207 367 2.3E-42 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 SUPERFAMILY SSF46785 4 112 8.71E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 PANTHER PTHR30579 1 296 2.2E-152 T 22-04-2016 VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 59.913 T 22-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 2.1E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 PANTHER PTHR30579:SF2 1 296 2.2E-152 T 22-04-2016 VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 Pfam PF03466 LysR substrate binding domain 97 258 5.2E-12 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 Gene3D G3DSA:1.10.10.10 4 86 3.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 Gene3D G3DSA:3.40.190.10 93 198 2.6E-41 T 22-04-2016 VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 SUPERFAMILY SSF53850 96 292 1.99E-21 T 22-04-2016 VCLMA_RS02440 3bda84781d51a8282db58278339931a4 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 6.6E-104 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP VCLMA_RS07705 87412ebb48ec9295c3287df4ab5dd905 417 PANTHER PTHR35334 1 417 8.8E-273 T 22-04-2016 VCLMA_RS07705 87412ebb48ec9295c3287df4ab5dd905 417 Pfam PF03222 Tryptophan/tyrosine permease family 30 385 1.1E-12 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 VCLMA_RS07705 87412ebb48ec9295c3287df4ab5dd905 417 PANTHER PTHR35334:SF2 1 417 8.8E-273 T 22-04-2016 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 SMART SM00957 6 403 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Pfam PF02810 SEC-C motif 883 901 1.7E-10 T 22-04-2016 IPR004027 SEC-C motif VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Gene3D G3DSA:1.10.3060.10 648 831 6.4E-60 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 20.108 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF52540 369 416 2.84E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF52540 5 228 2.84E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 ProSitePatterns PS01312 SecA family signature. 501 516 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Gene3D G3DSA:3.40.50.300 2 228 8.8E-126 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Gene3D G3DSA:3.40.50.300 370 417 8.8E-126 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 SMART SM00958 228 359 3.1E-82 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Pfam PF07516 SecA Wing and Scaffold domain 617 829 1.3E-67 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 117 127 1.6E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 414 427 1.6E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 101 115 1.6E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 377 394 1.6E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 170 190 1.6E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 63 87 1.6E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 PRINTS PR00906 SecA protein signature 340 362 1.6E-71 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Pfam PF07517 SecA DEAD-like domain 7 403 7.1E-133 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF52540 418 610 2.38E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Pfam PF01043 SecA preprotein cross-linking domain 232 359 5.5E-38 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Gene3D G3DSA:3.40.50.300 418 619 9.1E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 PANTHER PTHR30612 551 903 0.0 T 22-04-2016 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 PANTHER PTHR30612 1 521 0.0 T 22-04-2016 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF81767 227 369 4.97E-43 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF81886 620 840 5.75E-85 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 SUPERFAMILY SSF81886 879 891 5.75E-85 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VCLMA_RS11085 7fcee2c15e1516a28f3109c337dfd4a6 903 Gene3D G3DSA:3.90.1440.10 230 369 1.8E-46 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 VCLMA_RS02780 852bffccaffefa4b6d8e5ab6ef2649c7 367 Gene3D G3DSA:3.40.50.300 4 177 1.4E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02780 852bffccaffefa4b6d8e5ab6ef2649c7 367 PANTHER PTHR12169:SF11 1 366 1.3E-204 T 22-04-2016 VCLMA_RS02780 852bffccaffefa4b6d8e5ab6ef2649c7 367 PANTHER PTHR12169 1 366 1.3E-204 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VCLMA_RS02780 852bffccaffefa4b6d8e5ab6ef2649c7 367 Pfam PF03969 AFG1-like ATPase 1 364 1.6E-175 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 VCLMA_RS02780 852bffccaffefa4b6d8e5ab6ef2649c7 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 54.591 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VCLMA_RS02780 852bffccaffefa4b6d8e5ab6ef2649c7 367 SUPERFAMILY SSF52540 62 201 9.02E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10335 83ef66b6fdebdac8b4523ecff1874c65 346 Gene3D G3DSA:3.30.1330.10 23 171 6.4E-65 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VCLMA_RS10335 83ef66b6fdebdac8b4523ecff1874c65 346 Gene3D G3DSA:3.90.650.10 172 344 1.1E-67 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS10335 83ef66b6fdebdac8b4523ecff1874c65 346 PANTHER PTHR10520 8 346 8.3E-226 T 22-04-2016 VCLMA_RS10335 83ef66b6fdebdac8b4523ecff1874c65 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 1.1E-149 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS10335 83ef66b6fdebdac8b4523ecff1874c65 346 SUPERFAMILY SSF55326 8 171 1.79E-54 T 22-04-2016 VCLMA_RS10335 83ef66b6fdebdac8b4523ecff1874c65 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 343 1.9E-39 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS10335 83ef66b6fdebdac8b4523ecff1874c65 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 57 165 5.1E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VCLMA_RS10335 83ef66b6fdebdac8b4523ecff1874c65 346 SUPERFAMILY SSF56042 172 342 1.11E-61 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS10335 83ef66b6fdebdac8b4523ecff1874c65 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.384 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS09065 a8c1512b5e47e64451a2ca21bf2b9869 263 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 15 259 9.9E-85 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09065 a8c1512b5e47e64451a2ca21bf2b9869 263 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 11 259 33.895 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09065 a8c1512b5e47e64451a2ca21bf2b9869 263 PANTHER PTHR10992:SF698 15 260 2.0E-58 T 22-04-2016 VCLMA_RS09065 a8c1512b5e47e64451a2ca21bf2b9869 263 SUPERFAMILY SSF53474 11 260 1.01E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS09065 a8c1512b5e47e64451a2ca21bf2b9869 263 Pfam PF12697 Alpha/beta hydrolase family 18 252 2.1E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS09065 a8c1512b5e47e64451a2ca21bf2b9869 263 Gene3D G3DSA:3.40.50.1820 14 260 3.9E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS09065 a8c1512b5e47e64451a2ca21bf2b9869 263 PANTHER PTHR10992 15 260 2.0E-58 T 22-04-2016 VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 478 622 5.6E-46 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 PANTHER PTHR11911:SF110 147 454 1.4E-58 T 22-04-2016 VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 Pfam PF00571 CBS domain 226 278 2.6E-10 T 22-04-2016 IPR000644 CBS domain VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 Pfam PF00571 CBS domain 152 215 2.6E-8 T 22-04-2016 IPR000644 CBS domain VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 Gene3D G3DSA:2.60.120.10 7 140 8.1E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 SUPERFAMILY SSF51206 7 134 1.57E-25 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 SUPERFAMILY SSF54631 146 278 2.97E-27 T 22-04-2016 VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 Gene3D G3DSA:3.10.580.10 151 281 2.3E-31 T 22-04-2016 VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 SMART SM00100 17 134 8.3E-6 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 PANTHER PTHR11911 147 454 1.4E-58 T 22-04-2016 VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 2.0E-47 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 SMART SM00116 159 216 1.4 T 22-04-2016 IPR000644 CBS domain VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 SMART SM00116 233 280 3.1E-6 T 22-04-2016 IPR000644 CBS domain VCLMA_RS06095 8c840ea83351d77292a8fc9195e5fd8c 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 117 2.4E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VCLMA_RS03445 64219de51a066cd833cfc69b59cbef19 240 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 17 237 1.3E-72 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VCLMA_RS03445 64219de51a066cd833cfc69b59cbef19 240 PANTHER PTHR30616:SF3 1 240 3.5E-139 T 22-04-2016 VCLMA_RS03445 64219de51a066cd833cfc69b59cbef19 240 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 24 238 5.3E-63 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VCLMA_RS03445 64219de51a066cd833cfc69b59cbef19 240 Gene3D G3DSA:3.60.140.10 2 239 2.2E-96 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VCLMA_RS03445 64219de51a066cd833cfc69b59cbef19 240 PANTHER PTHR30616 1 240 3.5E-139 T 22-04-2016 VCLMA_RS03445 64219de51a066cd833cfc69b59cbef19 240 SUPERFAMILY SSF64438 2 239 1.1E-85 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic VCLMA_RS11040 029b418e0068684a9e686d149fe1b65b 286 Gene3D G3DSA:1.10.10.10 3 79 1.2E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS11040 029b418e0068684a9e686d149fe1b65b 286 Gene3D G3DSA:3.40.190.10 91 207 1.5E-5 T 22-04-2016 VCLMA_RS11040 029b418e0068684a9e686d149fe1b65b 286 PANTHER PTHR30126 1 281 1.7E-63 T 22-04-2016 VCLMA_RS11040 029b418e0068684a9e686d149fe1b65b 286 SUPERFAMILY SSF53850 90 280 4.71E-20 T 22-04-2016 VCLMA_RS11040 029b418e0068684a9e686d149fe1b65b 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 6.1E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS11040 029b418e0068684a9e686d149fe1b65b 286 Pfam PF03466 LysR substrate binding domain 90 276 4.8E-19 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS11040 029b418e0068684a9e686d149fe1b65b 286 PANTHER PTHR30126:SF11 1 281 1.7E-63 T 22-04-2016 VCLMA_RS11040 029b418e0068684a9e686d149fe1b65b 286 SUPERFAMILY SSF46785 4 85 2.33E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04020 7db7ca665102ad630860f040861349db 170 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.4E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS04020 7db7ca665102ad630860f040861349db 170 Pfam PF12019 Type II transport protein GspH 41 148 1.6E-9 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VCLMA_RS04020 7db7ca665102ad630860f040861349db 170 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS04020 7db7ca665102ad630860f040861349db 170 PIRSF PIRSF024622 1 170 2.4E-76 T 22-04-2016 IPR016824 Tfp pilus assembly protein FimT VCLMA_RS04020 7db7ca665102ad630860f040861349db 170 Gene3D G3DSA:3.30.700.10 5 51 9.3E-4 T 22-04-2016 VCLMA_RS04020 7db7ca665102ad630860f040861349db 170 SUPERFAMILY SSF54523 5 86 1.33E-12 T 22-04-2016 VCLMA_RS04020 7db7ca665102ad630860f040861349db 170 Pfam PF13633 Prokaryotic N-terminal methylation site 3 27 1.1E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS04090 4b8e24b921187d82ccb86e13cf2b8d68 214 Gene3D G3DSA:1.10.3680.10 70 211 3.4E-28 T 22-04-2016 IPR029024 TerB-like VCLMA_RS04090 4b8e24b921187d82ccb86e13cf2b8d68 214 Pfam PF04391 Protein of unknown function (DUF533) 37 211 2.4E-63 T 22-04-2016 IPR007486 Inner membrane protein YebE VCLMA_RS04090 4b8e24b921187d82ccb86e13cf2b8d68 214 SUPERFAMILY SSF158682 71 212 7.98E-27 T 22-04-2016 IPR029024 TerB-like VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 Pfam PF10135 Rod binding protein 53 102 1.0E-14 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 Gene3D G3DSA:1.10.530.10 138 204 5.9E-5 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 SMART SM00047 149 310 4.0E-76 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 PANTHER PTHR33308:SF3 11 311 2.2E-46 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 PANTHER PTHR33308 11 311 2.2E-46 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 170 306 1.1E-19 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 1.5E-29 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 183 201 1.5E-29 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 246 267 1.5E-29 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 1.5E-29 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 159 182 1.5E-29 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 224 245 1.5E-29 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 PRINTS PR01002 Flagellar protein FlgJ signature 289 307 1.5E-29 T 22-04-2016 VCLMA_RS10170 1a04e880d251ba4d3feb805b0df9df35 312 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 11 306 1.9E-104 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 4.8E-11 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 4.8E-11 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 4.8E-11 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 SUPERFAMILY SSF52021 4 142 3.66E-58 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 Gene3D G3DSA:3.40.50.880 154 378 1.3E-83 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 SMART SM01097 3 133 7.0E-94 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 8.5E-150 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 SUPERFAMILY SSF52317 153 377 5.62E-64 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 2.1E-47 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 2.9E-53 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 Gene3D G3DSA:3.50.30.20 4 145 1.7E-63 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 6.8E-40 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 6.8E-40 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 6.8E-40 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 6.8E-40 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 6.8E-40 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PANTHER PTHR11405 189 379 2.1E-256 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PANTHER PTHR11405 3 173 2.1E-256 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.5E-5 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.5E-5 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.5E-5 T 22-04-2016 VCLMA_RS11060 e892798d1309126b7e3b57f2155bd945 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.962 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 PANTHER PTHR22642:SF1 18 402 2.7E-145 T 22-04-2016 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 PANTHER PTHR22642 18 402 2.7E-145 T 22-04-2016 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 Pfam PF01979 Amidohydrolase family 57 376 2.2E-14 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 Gene3D G3DSA:3.20.20.140 72 344 5.3E-36 T 22-04-2016 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 Gene3D G3DSA:2.30.40.10 345 393 1.1E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 SUPERFAMILY SSF51556 60 356 6.51E-82 T 22-04-2016 IPR032466 Metal-dependent hydrolase VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 Gene3D G3DSA:2.30.40.10 2 71 3.1E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 Hamap MF_00372 Imidazolonepropionase [hutI]. 2 399 42.413 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 TIGRFAM TIGR01224 hutI: imidazolonepropionase 24 397 1.3E-169 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 SUPERFAMILY SSF51338 361 399 1.59E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VCLMA_RS05675 228667042f3762e9464fe93dba8d7567 402 SUPERFAMILY SSF51338 1 60 1.59E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:3.40.50.300 188 285 2.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:3.40.50.300 8 111 2.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 271 6.4E-77 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:3.40.50.300 286 387 3.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:3.40.50.300 552 642 3.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 4.0E-79 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 SUPERFAMILY SSF52540 8 642 3.25E-181 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 PANTHER PTHR11070 7 723 5.9E-245 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 PANTHER PTHR11070:SF7 7 723 5.9E-245 T 22-04-2016 VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:1.10.486.10 388 541 2.3E-50 T 22-04-2016 VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 721 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VCLMA_RS00915 e5306c34bea1f62fddd0e1cfc665905e 723 Gene3D G3DSA:1.10.10.160 115 187 9.8E-24 T 22-04-2016 IPR013986 DExx box DNA helicase domain VCLMA_RS09235 97ab75303942c7c483e95dd1538f1118 382 PANTHER PTHR14226 8 254 7.1E-80 T 22-04-2016 VCLMA_RS09235 97ab75303942c7c483e95dd1538f1118 382 Pfam PF01734 Patatin-like phospholipase 29 198 9.9E-21 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VCLMA_RS09235 97ab75303942c7c483e95dd1538f1118 382 PANTHER PTHR14226:SF25 8 254 7.1E-80 T 22-04-2016 VCLMA_RS09235 97ab75303942c7c483e95dd1538f1118 382 SUPERFAMILY SSF52151 25 267 8.89E-35 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VCLMA_RS09075 c2ad9e579c743985dc7a4e418f32b491 435 Gene3D G3DSA:3.60.120.10 16 425 4.2E-88 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VCLMA_RS09075 c2ad9e579c743985dc7a4e418f32b491 435 Pfam PF00425 chorismate binding enzyme 165 417 2.3E-71 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VCLMA_RS09075 c2ad9e579c743985dc7a4e418f32b491 435 SUPERFAMILY SSF56322 30 425 2.49E-99 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VCLMA_RS09075 c2ad9e579c743985dc7a4e418f32b491 435 PANTHER PTHR11236 38 425 2.1E-139 T 22-04-2016 VCLMA_RS09075 c2ad9e579c743985dc7a4e418f32b491 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 4 427 38.883 T 22-04-2016 VCLMA_RS09075 c2ad9e579c743985dc7a4e418f32b491 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 6.9E-105 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VCLMA_RS09075 c2ad9e579c743985dc7a4e418f32b491 435 PANTHER PTHR11236:SF3 38 425 2.1E-139 T 22-04-2016 VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 SUPERFAMILY SSF53271 69 306 4.53E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 3.5E-50 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.4E-30 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.609 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 4.2E-125 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 Gene3D G3DSA:3.40.50.2020 2 159 2.2E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 Gene3D G3DSA:3.40.50.2020 160 286 2.2E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 PANTHER PTHR10210:SF41 2 314 4.0E-187 T 22-04-2016 VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 PANTHER PTHR10210 2 314 4.0E-187 T 22-04-2016 VCLMA_RS10050 921aae6c9423cdb5dfa0cf3f633f732a 314 SMART SM01400 4 121 1.6E-76 T 22-04-2016 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 SUPERFAMILY SSF53738 157 246 2.55E-23 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 136 9.5E-45 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 432 8.5E-197 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 PANTHER PTHR22573:SF15 3 435 3.4E-169 T 22-04-2016 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 244 2.6E-13 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 2.3E-7 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 224 239 2.3E-7 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 SUPERFAMILY SSF53738 4 182 2.59E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 Gene3D G3DSA:3.40.120.10 177 240 1.1E-16 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 434 45.068 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 PANTHER PTHR22573 3 435 3.4E-169 T 22-04-2016 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 Gene3D G3DSA:3.40.120.10 241 351 2.1E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 248 356 1.7E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 365 431 1.8E-12 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 SUPERFAMILY SSF53738 248 355 5.89E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 Gene3D G3DSA:3.30.310.50 352 432 1.8E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 Gene3D G3DSA:3.40.120.10 5 152 2.1E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS03110 35a6e3e04148ace9eb77105e91c8a34e 435 SUPERFAMILY SSF55957 347 434 2.09E-22 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS12265 eac2581e0b62a7c51f9f2d754652534a 196 PANTHER PTHR39555 1 196 7.5E-63 T 22-04-2016 VCLMA_RS12265 eac2581e0b62a7c51f9f2d754652534a 196 PANTHER PTHR39555:SF1 1 196 7.5E-63 T 22-04-2016 VCLMA_RS12265 eac2581e0b62a7c51f9f2d754652534a 196 Gene3D G3DSA:3.30.70.60 92 195 6.1E-32 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VCLMA_RS12265 eac2581e0b62a7c51f9f2d754652534a 196 PIRSF PIRSF016482 1 196 2.7E-86 T 22-04-2016 IPR007445 Pilus assembly protein, PilO VCLMA_RS12265 eac2581e0b62a7c51f9f2d754652534a 196 Pfam PF04350 Pilus assembly protein, PilO 50 189 1.2E-45 T 22-04-2016 IPR007445 Pilus assembly protein, PilO VCLMA_RS07515 6d7d1fe268bcf629290e00bd58ae804e 77 PANTHER PTHR34386:SF1 1 77 3.9E-20 T 22-04-2016 VCLMA_RS07515 6d7d1fe268bcf629290e00bd58ae804e 77 PANTHER PTHR34386 1 77 3.9E-20 T 22-04-2016 VCLMA_RS07515 6d7d1fe268bcf629290e00bd58ae804e 77 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VCLMA_RS07515 6d7d1fe268bcf629290e00bd58ae804e 77 Pfam PF00462 Glutaredoxin 4 60 1.8E-12 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VCLMA_RS07515 6d7d1fe268bcf629290e00bd58ae804e 77 Gene3D G3DSA:3.40.30.10 3 74 2.2E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS07515 6d7d1fe268bcf629290e00bd58ae804e 77 SUPERFAMILY SSF52833 3 68 1.5E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 3.3E-249 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 SUPERFAMILY SSF51621 249 549 9.42E-111 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 PANTHER PTHR22931 66 550 6.5E-218 T 22-04-2016 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 PIRSF PIRSF000732 1 573 2.6E-220 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 SUPERFAMILY SSF47831 24 143 3.53E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 2.6E-30 T 22-04-2016 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 2.6E-30 T 22-04-2016 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 2.6E-30 T 22-04-2016 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 2.6E-30 T 22-04-2016 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 SUPERFAMILY SSF52009 125 243 7.06E-34 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 Gene3D G3DSA:3.20.20.60 255 570 3.9E-114 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 Gene3D G3DSA:3.50.30.10 133 254 3.5E-38 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.1E-124 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 Gene3D G3DSA:1.10.274.10 23 132 1.4E-37 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 1.1E-32 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VCLMA_RS04510 d702435e874a17d239a5be0e21efc3b6 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 5.3E-20 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 Gene3D G3DSA:1.10.1040.10 360 484 4.7E-14 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 Gene3D G3DSA:3.40.50.720 1 201 5.9E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 2.4E-16 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 6.3E-26 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 SUPERFAMILY SSF48179 210 341 1.7E-39 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 9.0E-60 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 SUPERFAMILY SSF48179 348 487 1.11E-40 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 PANTHER PTHR21371 1 494 3.9E-202 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 8.9E-124 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 488 36.622 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00810 7d25dc69b68fe6f75ee3e5c00904649c 494 SUPERFAMILY SSF51735 27 208 5.41E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS05780 f9920594dca071d3e75b8a552c5d4a63 259 Gene3D G3DSA:3.30.460.10 105 191 1.6E-6 T 22-04-2016 VCLMA_RS05780 f9920594dca071d3e75b8a552c5d4a63 259 Pfam PF04607 Region found in RelA / SpoT proteins 107 207 1.1E-4 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VCLMA_RS05780 f9920594dca071d3e75b8a552c5d4a63 259 SUPERFAMILY SSF81301 68 224 6.54E-17 T 22-04-2016 VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.344 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 PANTHER PTHR10133:SF39 1 259 1.5E-182 T 22-04-2016 VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 255 1.8E-22 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 Gene3D G3DSA:1.10.150.20 180 238 1.1E-17 T 22-04-2016 VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 SUPERFAMILY SSF47807 164 255 1.08E-19 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 PANTHER PTHR10133 1 259 1.5E-182 T 22-04-2016 VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 SUPERFAMILY SSF88723 4 164 1.52E-39 T 22-04-2016 IPR029060 PIN domain-like VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 Gene3D G3DSA:3.40.50.1010 4 179 9.4E-49 T 22-04-2016 IPR029060 PIN domain-like VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 162 1.0E-32 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 SMART SM00279 167 202 1.5E-7 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VCLMA_RS04205 ba3134d62d0c1ffe460faf162c1c847a 259 SMART SM00475 3 254 4.4E-63 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 Gene3D G3DSA:1.10.10.10 144 206 1.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 SMART SM00421 147 204 6.2E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 SUPERFAMILY SSF46894 140 206 7.48E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 Pfam PF00072 Response regulator receiver domain 7 120 6.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 8.3E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 SMART SM00448 5 119 9.9E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 Gene3D G3DSA:3.40.50.2300 4 130 5.0E-28 T 22-04-2016 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 PANTHER PTHR26402 5 208 1.6E-96 T 22-04-2016 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 SUPERFAMILY SSF52172 4 130 4.84E-25 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS12585 49f6f6c13bbbc5b3c753857685c53037 209 PANTHER PTHR26402:SF474 5 208 1.6E-96 T 22-04-2016 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PANTHER PTHR19384:SF76 71 607 4.7E-222 T 22-04-2016 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 15 607 4.4E-256 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 Gene3D G3DSA:2.40.30.10 237 288 4.2E-39 T 22-04-2016 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 Gene3D G3DSA:2.40.30.10 392 462 4.2E-39 T 22-04-2016 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 Pfam PF00175 Oxidoreductase NAD-binding domain 465 571 1.7E-18 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 Gene3D G3DSA:1.20.990.10 289 391 6.7E-36 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 Pfam PF00667 FAD binding domain 239 432 3.5E-33 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PANTHER PTHR19384 71 607 4.7E-222 T 22-04-2016 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00369 Flavodoxin signature 121 132 1.9E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00369 Flavodoxin signature 177 196 1.9E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00369 Flavodoxin signature 153 163 1.9E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00369 Flavodoxin signature 73 86 1.9E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 Pfam PF00258 Flavodoxin 74 203 5.1E-31 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 SUPERFAMILY SSF52343 452 607 2.75E-52 T 22-04-2016 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 SUPERFAMILY SSF52218 71 216 2.37E-48 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 SUPERFAMILY SSF63380 237 453 7.03E-66 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 401 2.7E-28 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 278 288 2.7E-28 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 489 498 2.7E-28 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 2.7E-28 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 502 513 2.7E-28 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 556 564 2.7E-28 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 427 436 2.7E-28 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 549 2.7E-28 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 Gene3D G3DSA:3.40.50.360 64 217 4.8E-49 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 PIRSF PIRSF000207 7 607 6.7E-267 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 7 607 50.053 T 22-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01920 3e59c98d0d2d13f45022e296ba9f24d8 607 Gene3D G3DSA:3.40.50.80 463 606 3.2E-61 T 22-04-2016 VCLMA_RS11420 cdfef5d18121ede5b4afd4557a6671ec 321 PANTHER PTHR38782:SF1 2 317 1.1E-139 T 22-04-2016 VCLMA_RS11420 cdfef5d18121ede5b4afd4557a6671ec 321 PANTHER PTHR38782 2 317 1.1E-139 T 22-04-2016 VCLMA_RS11420 cdfef5d18121ede5b4afd4557a6671ec 321 Pfam PF03888 MucB/RseB N-terminal domain 25 199 2.9E-60 T 22-04-2016 IPR033434 MucB/RseB, N-terminal VCLMA_RS11420 cdfef5d18121ede5b4afd4557a6671ec 321 PIRSF PIRSF005427 1 316 5.4E-87 T 22-04-2016 IPR005588 MucB/RseB VCLMA_RS11420 cdfef5d18121ede5b4afd4557a6671ec 321 Gene3D G3DSA:2.50.20.10 120 182 3.2E-9 T 22-04-2016 VCLMA_RS11420 cdfef5d18121ede5b4afd4557a6671ec 321 Pfam PF17188 MucB/RseB C-terminal domain 217 311 7.9E-28 T 22-04-2016 IPR033436 MucB/RseB, C-terminal VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 2.1E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 2.1E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 SUPERFAMILY SSF100950 75 234 1.54E-24 T 22-04-2016 VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 Gene3D G3DSA:1.10.10.10 4 60 1.4E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 SMART SM00420 7 60 9.1E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 Pfam PF00455 DeoR C terminal sensor domain 76 234 1.3E-45 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 SUPERFAMILY SSF46785 4 77 4.56E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 PANTHER PTHR30363:SF1 3 238 4.8E-95 T 22-04-2016 VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 SMART SM01134 74 235 1.8E-61 T 22-04-2016 VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 Gene3D G3DSA:3.30.750.70 79 154 9.5E-13 T 22-04-2016 VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 Pfam PF08220 DeoR-like helix-turn-helix domain 7 62 6.7E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VCLMA_RS07205 a0c3a66a42d2cb1bac66dff708666507 253 PANTHER PTHR30363 3 238 4.8E-95 T 22-04-2016 VCLMA_RS11760 97c546df70dc8456f024bf7e5dedb727 241 SUPERFAMILY SSF52540 3 237 1.47E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11760 97c546df70dc8456f024bf7e5dedb727 241 Pfam PF00005 ABC transporter 20 166 2.7E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS11760 97c546df70dc8456f024bf7e5dedb727 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 214 236 2.8E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VCLMA_RS11760 97c546df70dc8456f024bf7e5dedb727 241 Gene3D G3DSA:3.40.50.300 3 235 2.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11760 97c546df70dc8456f024bf7e5dedb727 241 SMART SM00382 28 202 4.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS11760 97c546df70dc8456f024bf7e5dedb727 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS11760 97c546df70dc8456f024bf7e5dedb727 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 3.9E-126 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VCLMA_RS11760 97c546df70dc8456f024bf7e5dedb727 241 PANTHER PTHR24220:SF497 5 238 6.1E-151 T 22-04-2016 VCLMA_RS11760 97c546df70dc8456f024bf7e5dedb727 241 PANTHER PTHR24220 5 238 6.1E-151 T 22-04-2016 VCLMA_RS00680 1a3220f6c9e86aeccf45a21853736a0c 408 SUPERFAMILY SSF109604 185 404 7.53E-42 T 22-04-2016 VCLMA_RS00680 1a3220f6c9e86aeccf45a21853736a0c 408 Pfam PF00563 EAL domain 76 194 2.4E-13 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00680 1a3220f6c9e86aeccf45a21853736a0c 408 PANTHER PTHR33525:SF4 3 408 5.7E-157 T 22-04-2016 VCLMA_RS00680 1a3220f6c9e86aeccf45a21853736a0c 408 Gene3D G3DSA:3.20.20.450 81 185 1.6E-12 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00680 1a3220f6c9e86aeccf45a21853736a0c 408 SUPERFAMILY SSF141868 5 199 1.7E-27 T 22-04-2016 IPR001633 EAL domain VCLMA_RS00680 1a3220f6c9e86aeccf45a21853736a0c 408 Pfam PF08668 HDOD domain 208 324 3.0E-13 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VCLMA_RS00680 1a3220f6c9e86aeccf45a21853736a0c 408 PIRSF PIRSF003180 1 408 2.5E-179 T 22-04-2016 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VCLMA_RS00680 1a3220f6c9e86aeccf45a21853736a0c 408 Gene3D G3DSA:1.10.3150.10 186 355 1.1E-30 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD VCLMA_RS00680 1a3220f6c9e86aeccf45a21853736a0c 408 PANTHER PTHR33525 3 408 5.7E-157 T 22-04-2016 VCLMA_RS12615 5cbb5b6af6a47053be104a96c498c6f8 90 PANTHER PTHR34476 2 90 9.4E-30 T 22-04-2016 VCLMA_RS12615 5cbb5b6af6a47053be104a96c498c6f8 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.0E-29 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS12615 5cbb5b6af6a47053be104a96c498c6f8 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.837 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS12615 5cbb5b6af6a47053be104a96c498c6f8 90 Gene3D G3DSA:3.90.940.10 1 77 5.3E-17 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS12615 5cbb5b6af6a47053be104a96c498c6f8 90 Pfam PF01192 RNA polymerase Rpb6 10 60 1.4E-17 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS12615 5cbb5b6af6a47053be104a96c498c6f8 90 SMART SM01409 8 61 2.4E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS12615 5cbb5b6af6a47053be104a96c498c6f8 90 SUPERFAMILY SSF63562 1 78 6.67E-26 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS02825 0ba68619611baf8e1755ca719fd04011 189 Pfam PF04972 BON domain 122 188 3.2E-16 T 22-04-2016 IPR007055 BON domain VCLMA_RS02825 0ba68619611baf8e1755ca719fd04011 189 Pfam PF04972 BON domain 46 112 2.0E-9 T 22-04-2016 IPR007055 BON domain VCLMA_RS02825 0ba68619611baf8e1755ca719fd04011 189 PANTHER PTHR34606 1 187 8.3E-89 T 22-04-2016 VCLMA_RS02825 0ba68619611baf8e1755ca719fd04011 189 SMART SM00749 127 189 0.0016 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VCLMA_RS02825 0ba68619611baf8e1755ca719fd04011 189 SMART SM00749 50 113 26.0 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria VCLMA_RS02825 0ba68619611baf8e1755ca719fd04011 189 PANTHER PTHR34606:SF4 1 187 8.3E-89 T 22-04-2016 VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 SUPERFAMILY SSF52540 310 523 2.67E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 Gene3D G3DSA:3.40.50.300 318 539 1.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 Gene3D G3DSA:3.40.50.300 2 271 9.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 Pfam PF16326 ABC transporter C-terminal domain 564 633 8.0E-22 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 PANTHER PTHR19211 1 574 2.3E-244 T 22-04-2016 VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 Pfam PF00005 ABC transporter 19 185 1.2E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 Pfam PF00005 ABC transporter 336 469 2.2E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 SMART SM00382 344 514 1.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 SMART SM00382 28 230 6.0E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 Pfam PF12848 ABC transporter 224 298 2.1E-10 T 22-04-2016 IPR032781 ABC-transporter extension domain VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 SUPERFAMILY SSF52540 126 241 8.21E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 SUPERFAMILY SSF52540 3 94 8.21E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 PANTHER PTHR19211:SF45 1 574 2.3E-244 T 22-04-2016 VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS06890 c5488a7f16d9a3526d915009c2fe1ad6 639 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 PANTHER PTHR10098:SF128 121 397 2.5E-86 T 22-04-2016 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 Gene3D G3DSA:3.30.70.270 478 631 3.4E-21 T 22-04-2016 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SMART SM00267 466 636 5.8E-10 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 Pfam PF13432 Tetratricopeptide repeat 333 396 0.0056 T 22-04-2016 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SUPERFAMILY SSF48452 288 398 3.41E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SUPERFAMILY SSF48452 175 324 1.06E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 478 630 1.3E-16 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 PANTHER PTHR10098 121 397 2.5E-86 T 22-04-2016 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 Gene3D G3DSA:1.25.40.10 179 396 4.8E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SUPERFAMILY SSF55073 483 632 3.45E-20 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 Pfam PF13424 Tetratricopeptide repeat 212 277 5.0E-10 T 22-04-2016 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 477 632 2.8E-18 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SMART SM00028 329 362 0.048 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SMART SM00028 209 242 25.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SMART SM00028 249 282 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SMART SM00028 289 322 18.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SMART SM00028 369 402 380.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS06455 4698b75876bfeaed1eff4c047948fa1e 648 SMART SM00028 172 205 11.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS05855 ba8ef2da5bef565edc43c13a051460e5 200 SMART SM00855 3 151 2.9E-8 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VCLMA_RS05855 ba8ef2da5bef565edc43c13a051460e5 200 PANTHER PTHR23029 1 194 5.2E-20 T 22-04-2016 VCLMA_RS05855 ba8ef2da5bef565edc43c13a051460e5 200 SUPERFAMILY SSF53254 1 195 4.28E-32 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VCLMA_RS05855 ba8ef2da5bef565edc43c13a051460e5 200 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 191 3.0E-31 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 VCLMA_RS05855 ba8ef2da5bef565edc43c13a051460e5 200 Gene3D G3DSA:3.40.50.1240 1 191 2.2E-30 T 22-04-2016 IPR029033 Histidine phosphatase superfamily VCLMA_RS11770 8595e6c5115555829ed588d776e90819 95 SUPERFAMILY SSF69754 1 95 3.27E-34 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VCLMA_RS11770 8595e6c5115555829ed588d776e90819 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.3E-27 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VCLMA_RS11770 8595e6c5115555829ed588d776e90819 95 Gene3D G3DSA:3.30.160.100 1 95 9.9E-37 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VCLMA_RS11770 8595e6c5115555829ed588d776e90819 95 PANTHER PTHR33231 1 95 7.2E-41 T 22-04-2016 VCLMA_RS11770 8595e6c5115555829ed588d776e90819 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 2.2E-32 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 Gene3D G3DSA:3.10.580.10 148 276 7.9E-17 T 22-04-2016 VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 SMART SM00116 229 276 0.47 T 22-04-2016 IPR000644 CBS domain VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 SMART SM00116 155 212 18.0 T 22-04-2016 IPR000644 CBS domain VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 PANTHER PTHR11911 147 355 4.3E-43 T 22-04-2016 VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 Pfam PF03445 Putative nucleotidyltransferase DUF294 301 431 1.3E-41 T 22-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 470 603 7.6E-41 T 22-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 PANTHER PTHR11911:SF68 147 355 4.3E-43 T 22-04-2016 VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 Gene3D G3DSA:2.60.120.10 8 128 1.1E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 SUPERFAMILY SSF54631 144 275 4.76E-17 T 22-04-2016 VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 SUPERFAMILY SSF51206 8 128 3.01E-16 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 3.9E-10 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VCLMA_RS01435 9b152631e48a6e62c11864cd90e16745 607 Pfam PF00571 CBS domain 222 275 0.0013 T 22-04-2016 IPR000644 CBS domain VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 PANTHER PTHR18934 4 430 3.9E-128 T 22-04-2016 VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 SUPERFAMILY SSF52540 13 481 2.58E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 PANTHER PTHR18934 610 619 3.9E-128 T 22-04-2016 VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 PANTHER PTHR18934 492 511 3.9E-128 T 22-04-2016 VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 Gene3D G3DSA:3.40.50.300 200 339 5.2E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 Pfam PF08482 ATP-dependent helicase C-terminal 673 805 1.6E-51 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 Gene3D G3DSA:3.40.50.300 4 160 1.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 Pfam PF00270 DEAD/DEAH box helicase 19 165 1.4E-8 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 PIRSF PIRSF005496 1 819 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 SMART SM00490 226 327 7.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 SMART SM00847 386 476 6.7E-10 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 Pfam PF00271 Helicase conserved C-terminal domain 205 326 3.1E-12 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 Pfam PF04408 Helicase associated domain (HA2) 387 446 1.0E-9 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 PANTHER PTHR18934:SF118 610 619 3.9E-128 T 22-04-2016 VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 PANTHER PTHR18934:SF118 492 511 3.9E-128 T 22-04-2016 VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 PANTHER PTHR18934:SF118 4 430 3.9E-128 T 22-04-2016 VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 SMART SM00487 2 186 7.9E-15 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS02920 2c952cbb57e89f36f179382400c99a8f 820 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 817 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VCLMA_RS00190 325f0476f68867381e71f1f5a7b339de 263 PANTHER PTHR40053 1 263 5.7E-107 T 22-04-2016 VCLMA_RS00190 325f0476f68867381e71f1f5a7b339de 263 Pfam PF07070 SpoOM protein 4 219 5.0E-78 T 22-04-2016 IPR009776 Sporulation stage 0, protein M VCLMA_RS03180 0e1cc6e4c1aaca9bc6681c0e9221ed67 292 PANTHER PTHR30217:SF8 1 291 1.5E-217 T 22-04-2016 VCLMA_RS03180 0e1cc6e4c1aaca9bc6681c0e9221ed67 292 Pfam PF01136 Peptidase family U32 82 237 3.1E-13 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS03180 0e1cc6e4c1aaca9bc6681c0e9221ed67 292 PANTHER PTHR30217 1 291 1.5E-217 T 22-04-2016 VCLMA_RS11320 1c8b80e0c3509e4ec9198db4ce11ae80 256 Pfam PF16537 Type II secretion system protein B 191 250 6.0E-23 T 22-04-2016 IPR032389 Type II secretion system protein B VCLMA_RS02165 2e8c13737eb266224f8028b2092791f3 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 10 319 9.0E-112 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VCLMA_RS02165 2e8c13737eb266224f8028b2092791f3 322 PANTHER PTHR30024:SF13 1 322 3.1E-131 T 22-04-2016 VCLMA_RS02165 2e8c13737eb266224f8028b2092791f3 322 SUPERFAMILY SSF53850 25 321 5.2E-89 T 22-04-2016 VCLMA_RS02165 2e8c13737eb266224f8028b2092791f3 322 Pfam PF16868 NMT1-like family 30 319 1.7E-98 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family VCLMA_RS02165 2e8c13737eb266224f8028b2092791f3 322 Gene3D G3DSA:3.40.190.10 25 108 9.6E-67 T 22-04-2016 VCLMA_RS02165 2e8c13737eb266224f8028b2092791f3 322 Gene3D G3DSA:3.40.190.10 251 320 9.6E-67 T 22-04-2016 VCLMA_RS02165 2e8c13737eb266224f8028b2092791f3 322 Gene3D G3DSA:3.40.190.10 118 250 7.9E-36 T 22-04-2016 VCLMA_RS02165 2e8c13737eb266224f8028b2092791f3 322 PANTHER PTHR30024 1 322 3.1E-131 T 22-04-2016 VCLMA_RS02560 3586ee253e970a9a897cf2a1441aea51 250 Gene3D G3DSA:3.40.1210.10 1 247 5.1E-91 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VCLMA_RS02560 3586ee253e970a9a897cf2a1441aea51 250 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 3.4E-74 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VCLMA_RS02560 3586ee253e970a9a897cf2a1441aea51 250 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 41.889 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VCLMA_RS02560 3586ee253e970a9a897cf2a1441aea51 250 SUPERFAMILY SSF64167 1 246 3.4E-86 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VCLMA_RS02560 3586ee253e970a9a897cf2a1441aea51 250 PANTHER PTHR30457 1 244 2.6E-98 T 22-04-2016 VCLMA_RS02560 3586ee253e970a9a897cf2a1441aea51 250 Pfam PF01975 Survival protein SurE 3 181 1.5E-59 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 VCLMA_RS00315 0f8f9b8469739deca2e38ef1dd41e5dd 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 6 124 19.083 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VCLMA_RS00315 0f8f9b8469739deca2e38ef1dd41e5dd 126 TIGRFAM TIGR00494 crcB: protein CrcB 9 120 1.5E-28 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VCLMA_RS00315 0f8f9b8469739deca2e38ef1dd41e5dd 126 PANTHER PTHR28259 1 120 7.7E-37 T 22-04-2016 VCLMA_RS00315 0f8f9b8469739deca2e38ef1dd41e5dd 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 8 119 1.7E-23 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VCLMA_RS06450 e41a31e7f340a1df3f65cb9631c15eed 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 3.8E-84 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VCLMA_RS06450 e41a31e7f340a1df3f65cb9631c15eed 231 PANTHER PTHR11587 1 212 3.0E-105 T 22-04-2016 VCLMA_RS06450 e41a31e7f340a1df3f65cb9631c15eed 231 Gene3D G3DSA:3.40.50.620 1 212 4.7E-84 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS06450 e41a31e7f340a1df3f65cb9631c15eed 231 SUPERFAMILY SSF52402 1 212 1.43E-68 T 22-04-2016 VCLMA_RS06450 e41a31e7f340a1df3f65cb9631c15eed 231 PIRSF PIRSF006293 1 224 9.7E-83 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VCLMA_RS06450 e41a31e7f340a1df3f65cb9631c15eed 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 50.476 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VCLMA_RS06450 e41a31e7f340a1df3f65cb9631c15eed 231 PANTHER PTHR11587:SF3 1 212 3.0E-105 T 22-04-2016 VCLMA_RS06450 e41a31e7f340a1df3f65cb9631c15eed 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 9.3E-86 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 VCLMA_RS01270 7e41aea72fc12835040dbf6116f7cf35 438 Pfam PF00753 Metallo-beta-lactamase superfamily 14 204 3.5E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS01270 7e41aea72fc12835040dbf6116f7cf35 438 PANTHER PTHR11203:SF11 1 432 9.7E-132 T 22-04-2016 VCLMA_RS01270 7e41aea72fc12835040dbf6116f7cf35 438 SMART SM00849 13 218 9.9E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS01270 7e41aea72fc12835040dbf6116f7cf35 438 Pfam PF10996 Beta-Casp domain 234 364 6.4E-25 T 22-04-2016 IPR022712 Beta-Casp domain VCLMA_RS01270 7e41aea72fc12835040dbf6116f7cf35 438 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 378 437 3.7E-15 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VCLMA_RS01270 7e41aea72fc12835040dbf6116f7cf35 438 SMART SM01027 234 364 4.1E-53 T 22-04-2016 IPR022712 Beta-Casp domain VCLMA_RS01270 7e41aea72fc12835040dbf6116f7cf35 438 Gene3D G3DSA:3.60.15.10 4 240 5.7E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS01270 7e41aea72fc12835040dbf6116f7cf35 438 SUPERFAMILY SSF56281 1 432 1.7E-118 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS01270 7e41aea72fc12835040dbf6116f7cf35 438 PANTHER PTHR11203 1 432 9.7E-132 T 22-04-2016 VCLMA_RS10245 2af01e02d1fe669706c8c0db40e33865 211 PIRSF PIRSF028688 1 211 2.7E-124 T 22-04-2016 IPR014549 Flagellar protein FlgO VCLMA_RS07845 86275a8e746731a88dc1e3daa91a4f02 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 323 3.3E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS07845 86275a8e746731a88dc1e3daa91a4f02 331 Pfam PF00005 ABC transporter 24 187 2.8E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS07845 86275a8e746731a88dc1e3daa91a4f02 331 Gene3D G3DSA:3.40.50.300 2 262 1.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07845 86275a8e746731a88dc1e3daa91a4f02 331 PANTHER PTHR24220 5 328 2.2E-210 T 22-04-2016 VCLMA_RS07845 86275a8e746731a88dc1e3daa91a4f02 331 PANTHER PTHR24220:SF514 5 328 2.2E-210 T 22-04-2016 VCLMA_RS07845 86275a8e746731a88dc1e3daa91a4f02 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 2.9E-15 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS07845 86275a8e746731a88dc1e3daa91a4f02 331 SMART SM00382 32 237 6.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS07845 86275a8e746731a88dc1e3daa91a4f02 331 SUPERFAMILY SSF52540 3 268 2.02E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 28 376 3.1E-149 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 Hamap MF_01195 N-acetylneuraminate epimerase [nanM]. 7 384 46.702 T 22-04-2016 IPR019936 Mutatrotase, YjhT-like VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 Gene3D G3DSA:2.120.10.80 56 168 6.5E-26 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 Gene3D G3DSA:2.120.10.80 202 374 6.5E-26 T 22-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 Pfam PF01344 Kelch motif 81 130 9.8E-10 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 SUPERFAMILY SSF117281 27 269 1.57E-23 T 22-04-2016 VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 PANTHER PTHR23244:SF303 190 360 2.8E-16 T 22-04-2016 VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 PANTHER PTHR23244:SF303 29 154 2.8E-16 T 22-04-2016 VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 PANTHER PTHR23244 190 360 2.8E-16 T 22-04-2016 VCLMA_RS08170 2364b51d9c44cd9d7399e2e3b75ceaf7 384 PANTHER PTHR23244 29 154 2.8E-16 T 22-04-2016 VCLMA_RS11150 6f5856619a9d97ce5e7022b89b501697 580 PANTHER PTHR30627:SF1 14 580 1.9E-225 T 22-04-2016 VCLMA_RS11150 6f5856619a9d97ce5e7022b89b501697 580 Gene3D G3DSA:3.90.1310.10 148 247 1.3E-30 T 22-04-2016 VCLMA_RS11150 6f5856619a9d97ce5e7022b89b501697 580 SUPERFAMILY SSF56601 241 570 1.14E-90 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS11150 6f5856619a9d97ce5e7022b89b501697 580 Gene3D G3DSA:3.40.710.10 248 568 1.2E-87 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS11150 6f5856619a9d97ce5e7022b89b501697 580 Pfam PF03717 Penicillin-binding Protein dimerisation domain 74 227 3.9E-17 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VCLMA_RS11150 6f5856619a9d97ce5e7022b89b501697 580 SUPERFAMILY SSF56519 69 240 1.44E-41 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VCLMA_RS11150 6f5856619a9d97ce5e7022b89b501697 580 PANTHER PTHR30627 14 580 1.9E-225 T 22-04-2016 VCLMA_RS11150 6f5856619a9d97ce5e7022b89b501697 580 Pfam PF00905 Penicillin binding protein transpeptidase domain 267 562 7.8E-77 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 PANTHER PTHR18866 1 596 1.5E-219 T 22-04-2016 VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 PANTHER PTHR18866:SF109 1 596 1.5E-219 T 22-04-2016 VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 Pfam PF00682 HMGL-like 8 273 3.5E-65 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 Pfam PF02436 Conserved carboxylase domain 295 501 3.3E-51 T 22-04-2016 IPR003379 Carboxylase, conserved domain VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 Pfam PF00364 Biotin-requiring enzyme 539 598 1.2E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 Gene3D G3DSA:3.20.20.70 4 285 1.8E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 SUPERFAMILY SSF89000 300 461 1.96E-44 T 22-04-2016 VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 SUPERFAMILY SSF51230 523 598 2.09E-21 T 22-04-2016 IPR011053 Single hybrid motif VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 Gene3D G3DSA:2.40.50.100 528 598 1.2E-25 T 22-04-2016 VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 10 595 4.7E-279 T 22-04-2016 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 SUPERFAMILY SSF51569 6 303 9.16E-94 T 22-04-2016 VCLMA_RS03850 dc47b07453f9c9dc4f8e7bebbda0d22e 599 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 555 572 - T 22-04-2016 IPR001882 Biotin-binding site VCLMA_RS11805 3672ec9260c7765d99b88e8e9c948394 238 Pfam PF00005 ABC transporter 19 157 1.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS11805 3672ec9260c7765d99b88e8e9c948394 238 PANTHER PTHR24220 1 236 1.3E-116 T 22-04-2016 VCLMA_RS11805 3672ec9260c7765d99b88e8e9c948394 238 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS11805 3672ec9260c7765d99b88e8e9c948394 238 SMART SM00382 24 207 3.2E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS11805 3672ec9260c7765d99b88e8e9c948394 238 Gene3D G3DSA:3.40.50.300 4 230 9.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11805 3672ec9260c7765d99b88e8e9c948394 238 PANTHER PTHR24220:SF439 1 236 1.3E-116 T 22-04-2016 VCLMA_RS11805 3672ec9260c7765d99b88e8e9c948394 238 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 1.1E-119 T 22-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 VCLMA_RS11805 3672ec9260c7765d99b88e8e9c948394 238 SUPERFAMILY SSF52540 1 231 3.47E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09270 c622e594fb0092b03738053b5370c7fc 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 206 28.075 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VCLMA_RS09270 c622e594fb0092b03738053b5370c7fc 212 PANTHER PTHR10344 1 209 1.2E-73 T 22-04-2016 VCLMA_RS09270 c622e594fb0092b03738053b5370c7fc 212 Gene3D G3DSA:3.40.50.300 4 208 7.5E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09270 c622e594fb0092b03738053b5370c7fc 212 Pfam PF02223 Thymidylate kinase 8 198 7.2E-59 T 22-04-2016 VCLMA_RS09270 c622e594fb0092b03738053b5370c7fc 212 ProSitePatterns PS01331 Thymidylate kinase signature. 95 107 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VCLMA_RS09270 c622e594fb0092b03738053b5370c7fc 212 SUPERFAMILY SSF52540 1 209 3.45E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09270 c622e594fb0092b03738053b5370c7fc 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 2.0E-62 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VCLMA_RS03350 d0015912b7d14671d47d72016faa0286 113 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 1.1E-22 T 22-04-2016 IPR021242 Protein of unknown function DUF2799 VCLMA_RS04745 68f054990b3f24210d8f48cdc9eef1b5 209 PIRSF PIRSF006091 1 206 1.6E-82 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VCLMA_RS04745 68f054990b3f24210d8f48cdc9eef1b5 209 Pfam PF04205 FMN-binding domain 100 189 1.7E-20 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VCLMA_RS04745 68f054990b3f24210d8f48cdc9eef1b5 209 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 3.1E-73 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VCLMA_RS04745 68f054990b3f24210d8f48cdc9eef1b5 209 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 194 27.758 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VCLMA_RS04745 68f054990b3f24210d8f48cdc9eef1b5 209 SMART SM00900 100 192 2.0E-36 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VCLMA_RS04745 68f054990b3f24210d8f48cdc9eef1b5 209 PANTHER PTHR36118 1 209 4.7E-80 T 22-04-2016 VCLMA_RS04745 68f054990b3f24210d8f48cdc9eef1b5 209 PANTHER PTHR36118:SF1 1 209 4.7E-80 T 22-04-2016 VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 PANTHER PTHR30146:SF2 5 332 2.5E-176 T 22-04-2016 VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 Gene3D G3DSA:3.40.50.2300 63 174 2.7E-38 T 22-04-2016 VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 PANTHER PTHR30146 5 332 2.5E-176 T 22-04-2016 VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 Gene3D G3DSA:1.10.260.40 5 61 2.8E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.8E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 SUPERFAMILY SSF53822 64 319 2.94E-58 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 321 1.2E-33 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 SUPERFAMILY SSF47413 6 64 2.35E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 Gene3D G3DSA:3.40.50.2300 175 332 5.5E-46 T 22-04-2016 VCLMA_RS01390 03691682ba382d837023e2d7c3639fd1 332 SMART SM00354 6 76 3.8E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS04485 9ccc0f6352afc9703479f4421853f411 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.469 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VCLMA_RS04485 9ccc0f6352afc9703479f4421853f411 154 PANTHER PTHR22881 1 153 1.1E-65 T 22-04-2016 VCLMA_RS04485 9ccc0f6352afc9703479f4421853f411 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site VCLMA_RS04485 9ccc0f6352afc9703479f4421853f411 154 SUPERFAMILY SSF55486 3 149 3.17E-49 T 22-04-2016 VCLMA_RS04485 9ccc0f6352afc9703479f4421853f411 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 6.6E-38 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VCLMA_RS04485 9ccc0f6352afc9703479f4421853f411 154 Pfam PF02130 Uncharacterized protein family UPF0054 22 142 1.3E-38 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VCLMA_RS04485 9ccc0f6352afc9703479f4421853f411 154 Gene3D G3DSA:3.40.390.30 13 152 6.4E-50 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 Gene3D G3DSA:3.40.190.10 173 260 4.1E-19 T 22-04-2016 VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 Gene3D G3DSA:1.10.10.10 1 87 3.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 PANTHER PTHR30126 1 304 1.1E-189 T 22-04-2016 VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 Pfam PF03466 LysR substrate binding domain 89 293 2.2E-42 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 Gene3D G3DSA:3.40.190.10 89 172 1.4E-11 T 22-04-2016 VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 SUPERFAMILY SSF53850 89 296 7.78E-40 T 22-04-2016 VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 9.5E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 SUPERFAMILY SSF46785 1 112 2.21E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07945 3f0ea96a20df329d466e964b2e29053b 305 PANTHER PTHR30126:SF25 1 304 1.1E-189 T 22-04-2016 VCLMA_RS05090 d0dac9d862cedd7e30295852886181ee 194 PANTHER PTHR41277 1 194 4.0E-49 T 22-04-2016 VCLMA_RS05090 d0dac9d862cedd7e30295852886181ee 194 PANTHER PTHR41277:SF1 1 194 4.0E-49 T 22-04-2016 VCLMA_RS05090 d0dac9d862cedd7e30295852886181ee 194 Pfam PF04509 CheC-like family 9 43 5.3E-12 T 22-04-2016 IPR007597 CheC-like protein GO:0016787 VCLMA_RS05090 d0dac9d862cedd7e30295852886181ee 194 SUPERFAMILY SSF103039 4 190 2.22E-31 T 22-04-2016 IPR028976 CheC-like domain VCLMA_RS05090 d0dac9d862cedd7e30295852886181ee 194 Gene3D G3DSA:3.40.1550.10 5 192 5.5E-35 T 22-04-2016 IPR028976 CheC-like domain VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 PANTHER PTHR34354:SF1 2 281 1.6E-107 T 22-04-2016 VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 129 1.0E-49 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 Pfam PF14489 QueF-like protein 194 270 1.8E-26 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 164.072 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 2.8E-130 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 PIRSF PIRSF004750 6 281 1.4E-130 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 PANTHER PTHR34354 2 281 1.6E-107 T 22-04-2016 VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 Gene3D G3DSA:3.30.1130.10 144 280 2.4E-56 T 22-04-2016 VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 SUPERFAMILY SSF55620 184 264 2.89E-9 T 22-04-2016 VCLMA_RS04225 517f411452e5f13f1910d4afd0651fa6 281 Gene3D G3DSA:3.30.1130.10 21 136 5.0E-47 T 22-04-2016 VCLMA_RS01735 7bfbc39566f52e3df4e34a3a88bcc2b9 315 Gene3D G3DSA:1.10.287.890 203 285 5.8E-34 T 22-04-2016 VCLMA_RS01735 7bfbc39566f52e3df4e34a3a88bcc2b9 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 30.414 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VCLMA_RS01735 7bfbc39566f52e3df4e34a3a88bcc2b9 315 PANTHER PTHR11088 6 292 1.2E-123 T 22-04-2016 VCLMA_RS01735 7bfbc39566f52e3df4e34a3a88bcc2b9 315 Pfam PF01715 IPP transferase 42 287 1.9E-86 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VCLMA_RS01735 7bfbc39566f52e3df4e34a3a88bcc2b9 315 Gene3D G3DSA:3.40.50.300 8 174 2.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01735 7bfbc39566f52e3df4e34a3a88bcc2b9 315 SUPERFAMILY SSF52540 10 153 1.19E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01735 7bfbc39566f52e3df4e34a3a88bcc2b9 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 4.1E-117 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 SUPERFAMILY SSF55347 127 236 1.81E-37 T 22-04-2016 VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 PANTHER PTHR20836 1 269 6.3E-106 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 8.2E-102 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.903 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 Gene3D G3DSA:3.40.50.720 1 163 1.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 PANTHER PTHR20836:SF0 1 269 6.3E-106 T 22-04-2016 VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 1.8E-42 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 SUPERFAMILY SSF51735 236 268 4.22E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 SUPERFAMILY SSF51735 1 126 4.22E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 1.5E-43 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 PIRSF PIRSF000161 1 268 8.7E-91 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS11070 1439dc5df8f5b777df5e16bbcc525048 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 Gene3D G3DSA:3.40.50.880 3 190 2.3E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PANTHER PTHR11922:SF25 1 189 4.1E-85 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 9.5E-14 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 9.5E-14 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 9.5E-14 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00097 Anthranilate synthase component II signature 4 18 3.3E-34 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00097 Anthranilate synthase component II signature 104 112 3.3E-34 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00097 Anthranilate synthase component II signature 166 179 3.3E-34 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00097 Anthranilate synthase component II signature 52 61 3.3E-34 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00097 Anthranilate synthase component II signature 79 90 3.3E-34 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00097 Anthranilate synthase component II signature 124 136 3.3E-34 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 1.9E-5 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 1.9E-5 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 2.6E-53 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 PANTHER PTHR11922 1 189 4.1E-85 T 22-04-2016 VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 SUPERFAMILY SSF52317 3 191 1.04E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS05525 48e2ca6266308a2e4e4f7acfeeba548a 201 Pfam PF00117 Glutamine amidotransferase class-I 6 186 1.0E-43 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 Gene3D G3DSA:3.30.300.10 393 517 1.7E-53 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 Pfam PF02540 NAD synthase 212 285 1.7E-7 T 22-04-2016 IPR022310 NAD/GMP synthase VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 Gene3D G3DSA:3.40.50.620 215 391 6.4E-58 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 Gene3D G3DSA:3.40.50.880 4 214 1.1E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PANTHER PTHR11922 3 514 1.8E-296 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.3E-7 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PANTHER PTHR11922:SF2 3 514 1.8E-296 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 SUPERFAMILY SSF52402 189 412 5.51E-58 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 1.1E-155 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 1.5E-83 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.1E-43 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.8E-6 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.8E-6 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.8E-6 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 7.3E-7 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 7.3E-7 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 7.3E-7 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 SUPERFAMILY SSF52317 9 200 4.13E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 Pfam PF00117 Glutamine amidotransferase class-I 12 191 1.4E-41 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 SUPERFAMILY SSF54810 397 517 3.92E-51 T 22-04-2016 VCLMA_RS03730 02556115be0539e80c1e8e727b95b1a7 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.336 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 VCLMA_RS06405 93ee63522636b8c9a46d64ad554097fb 109 PIRSF PIRSF006223 2 109 1.0E-41 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VCLMA_RS06405 93ee63522636b8c9a46d64ad554097fb 109 PANTHER PTHR37010:SF1 1 109 1.3E-59 T 22-04-2016 VCLMA_RS06405 93ee63522636b8c9a46d64ad554097fb 109 Gene3D G3DSA:1.10.10.370 40 109 1.7E-36 T 22-04-2016 VCLMA_RS06405 93ee63522636b8c9a46d64ad554097fb 109 PANTHER PTHR37010 1 109 1.3E-59 T 22-04-2016 VCLMA_RS06405 93ee63522636b8c9a46d64ad554097fb 109 Pfam PF04358 DsrC like protein 4 109 5.2E-44 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VCLMA_RS06405 93ee63522636b8c9a46d64ad554097fb 109 Gene3D G3DSA:3.30.1420.10 1 39 3.8E-14 T 22-04-2016 VCLMA_RS06405 93ee63522636b8c9a46d64ad554097fb 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 2 109 4.5E-49 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE VCLMA_RS06405 93ee63522636b8c9a46d64ad554097fb 109 SUPERFAMILY SSF69721 2 109 1.31E-40 T 22-04-2016 IPR025526 DsrC-like domain VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 PRINTS PR00412 Epoxide hydrolase signature 39 54 6.2E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 PRINTS PR00412 Epoxide hydrolase signature 82 95 6.2E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 PRINTS PR00412 Epoxide hydrolase signature 230 252 6.2E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 PANTHER PTHR10992:SF768 5 255 4.1E-81 T 22-04-2016 VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 4.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 4.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 4.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 4.9E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 SUPERFAMILY SSF53474 5 254 1.63E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 PANTHER PTHR10992 5 255 4.1E-81 T 22-04-2016 VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 Gene3D G3DSA:3.40.50.1820 5 254 1.7E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS09670 db2495462626f5dde5b4ad170ea95a90 257 Pfam PF12697 Alpha/beta hydrolase family 16 247 2.8E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 PANTHER PTHR10000:SF20 1 275 3.5E-144 T 22-04-2016 VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 2.0E-59 T 22-04-2016 IPR000150 Cof protein GO:0016787 VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 22-04-2016 IPR000150 Cof protein GO:0016787 VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 SUPERFAMILY SSF56784 7 274 2.1E-68 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 3.8E-66 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 Gene3D G3DSA:3.40.50.1000 4 80 1.3E-55 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 Gene3D G3DSA:3.40.50.1000 187 274 1.3E-55 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 3.9E-31 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 22-04-2016 VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 PANTHER PTHR10000 1 275 3.5E-144 T 22-04-2016 VCLMA_RS00665 8d2466a84642c0d8b7afd3189580854d 275 Gene3D G3DSA:3.30.1240.10 91 186 5.6E-26 T 22-04-2016 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 Gene3D G3DSA:3.30.930.10 392 468 1.7E-100 T 22-04-2016 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 Gene3D G3DSA:3.30.930.10 6 204 1.7E-100 T 22-04-2016 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 PANTHER PTHR11451:SF3 4 244 2.4E-152 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 PANTHER PTHR11451:SF3 399 570 2.4E-152 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 Gene3D G3DSA:3.90.960.10 252 388 1.1E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 SUPERFAMILY SSF55681 407 478 2.3E-99 T 22-04-2016 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 SUPERFAMILY SSF55681 10 237 2.3E-99 T 22-04-2016 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 5.6E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 Pfam PF03129 Anticodon binding domain 475 568 9.8E-24 T 22-04-2016 IPR004154 Anticodon-binding VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 SUPERFAMILY SSF52954 463 570 2.13E-33 T 22-04-2016 IPR004154 Anticodon-binding VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 2.0E-42 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 PANTHER PTHR11451 4 244 2.4E-152 T 22-04-2016 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 PANTHER PTHR11451 399 570 2.4E-152 T 22-04-2016 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 Gene3D G3DSA:3.40.50.800 470 570 1.7E-34 T 22-04-2016 IPR004154 Anticodon-binding VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 8.9E-247 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 SUPERFAMILY SSF55826 218 390 3.79E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 PIRSF PIRSF001535 1 571 3.0E-266 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS04100 90f9e0a0f1a1f0292c0a27b514b5e185 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 41.181 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS04330 6f9f86eb08c398ae139bd62b2b1a02e5 250 PANTHER PTHR34136:SF1 1 249 5.4E-110 T 22-04-2016 VCLMA_RS04330 6f9f86eb08c398ae139bd62b2b1a02e5 250 PANTHER PTHR34136 1 249 5.4E-110 T 22-04-2016 VCLMA_RS04330 6f9f86eb08c398ae139bd62b2b1a02e5 250 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 230 1.4E-61 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 VCLMA_RS04330 6f9f86eb08c398ae139bd62b2b1a02e5 250 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 63 234 2.3E-50 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 VCLMA_RS05705 9c0bfa531ac799f1682896102a84efee 699 Pfam PF02378 Phosphotransferase system, EIIC 31 333 6.3E-19 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VCLMA_RS05705 9c0bfa531ac799f1682896102a84efee 699 SUPERFAMILY SSF141868 449 690 6.41E-63 T 22-04-2016 IPR001633 EAL domain VCLMA_RS05705 9c0bfa531ac799f1682896102a84efee 699 Gene3D G3DSA:3.20.20.450 449 688 3.4E-68 T 22-04-2016 IPR001633 EAL domain VCLMA_RS05705 9c0bfa531ac799f1682896102a84efee 699 SMART SM00052 440 680 1.1E-65 T 22-04-2016 IPR001633 EAL domain VCLMA_RS05705 9c0bfa531ac799f1682896102a84efee 699 Pfam PF00563 EAL domain 447 674 2.0E-61 T 22-04-2016 IPR001633 EAL domain VCLMA_RS05705 9c0bfa531ac799f1682896102a84efee 699 PANTHER PTHR33989:SF4 3 425 1.2E-169 T 22-04-2016 VCLMA_RS05705 9c0bfa531ac799f1682896102a84efee 699 PANTHER PTHR33989 3 425 1.2E-169 T 22-04-2016 VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 SUPERFAMILY SSF46689 5 64 5.34E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 PANTHER PTHR30055:SF47 4 200 5.0E-53 T 22-04-2016 VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 1.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 1.1E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 SUPERFAMILY SSF48498 75 168 1.48E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 152 195 1.2E-4 T 22-04-2016 VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 2.3E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 Gene3D G3DSA:1.10.357.10 65 197 1.2E-43 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 PANTHER PTHR30055 4 200 5.0E-53 T 22-04-2016 VCLMA_RS08120 195c820f87869b765f3c0b5e55f5f392 209 Gene3D G3DSA:1.10.10.60 4 58 8.5E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 PIRSF PIRSF000727 5 803 5.7E-290 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 SUPERFAMILY SSF55347 601 784 3.4E-47 T 22-04-2016 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 Pfam PF00742 Homoserine dehydrogenase 601 796 1.5E-44 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 3.3E-67 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 Gene3D G3DSA:3.30.360.10 623 779 1.4E-52 T 22-04-2016 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 PANTHER PTHR21499 378 800 5.9E-232 T 22-04-2016 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 Gene3D G3DSA:3.40.1160.10 5 52 2.6E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 Gene3D G3DSA:3.40.1160.10 102 291 2.6E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 PANTHER PTHR21499:SF29 378 800 5.9E-232 T 22-04-2016 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 1.2E-16 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 Pfam PF00696 Amino acid kinase family 5 277 4.0E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 SUPERFAMILY SSF53633 5 291 1.96E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 SUPERFAMILY SSF51735 448 623 1.31E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS12495 542b38f17c7263e48af47f2b20facb80 803 Gene3D G3DSA:3.40.50.720 448 622 2.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00085 887a6df0ca5a13bdacf9dca8fd08c69c 145 PANTHER PTHR11527:SF145 1 144 9.2E-50 T 22-04-2016 VCLMA_RS00085 887a6df0ca5a13bdacf9dca8fd08c69c 145 SUPERFAMILY SSF49764 6 138 2.93E-23 T 22-04-2016 IPR008978 HSP20-like chaperone VCLMA_RS00085 887a6df0ca5a13bdacf9dca8fd08c69c 145 Pfam PF00011 Hsp20/alpha crystallin family 43 137 3.0E-20 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain VCLMA_RS00085 887a6df0ca5a13bdacf9dca8fd08c69c 145 PANTHER PTHR11527 1 144 9.2E-50 T 22-04-2016 IPR031107 Small heat shock protein HSP20 VCLMA_RS00085 887a6df0ca5a13bdacf9dca8fd08c69c 145 Gene3D G3DSA:2.60.40.790 5 137 3.6E-19 T 22-04-2016 IPR008978 HSP20-like chaperone VCLMA_RS01370 f3e24baa0ddc1c8d788207bf7f909d4c 201 SUPERFAMILY SSF51569 2 199 1.39E-66 T 22-04-2016 VCLMA_RS01370 f3e24baa0ddc1c8d788207bf7f909d4c 201 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 35 44 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 VCLMA_RS01370 f3e24baa0ddc1c8d788207bf7f909d4c 201 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 123 136 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VCLMA_RS01370 f3e24baa0ddc1c8d788207bf7f909d4c 201 Gene3D G3DSA:3.20.20.70 1 200 9.4E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS01370 f3e24baa0ddc1c8d788207bf7f909d4c 201 Pfam PF01081 KDPG and KHG aldolase 3 195 1.4E-74 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VCLMA_RS01370 f3e24baa0ddc1c8d788207bf7f909d4c 201 PANTHER PTHR30246 1 201 5.9E-148 T 22-04-2016 VCLMA_RS01370 f3e24baa0ddc1c8d788207bf7f909d4c 201 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 3 200 2.5E-86 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VCLMA_RS01370 f3e24baa0ddc1c8d788207bf7f909d4c 201 PANTHER PTHR30246:SF5 1 201 5.9E-148 T 22-04-2016 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 534 546 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 876 2.0E-287 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 876 17.921 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 SUPERFAMILY SSF51621 6 876 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 Gene3D G3DSA:1.20.1440.90 273 386 1.7E-32 T 22-04-2016 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PANTHER PTHR30523 1 876 0.0 T 22-04-2016 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PANTHER PTHR30523:SF3 1 876 0.0 T 22-04-2016 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 532 552 2.0E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 383 403 2.0E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 2.0E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 574 603 2.0E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 2.0E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 2.0E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS12330 b8ce42e0c1e1f56e7942fac8d0df3c41 876 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 706 732 2.0E-66 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 PANTHER PTHR11262 12 423 1.0E-254 T 22-04-2016 VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 6.3E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 396 2.2E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 SMART SM01086 319 414 9.0E-33 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 Pfam PF06689 ClpX C4-type zinc finger 14 51 3.0E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 417 53.26 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 Gene3D G3DSA:1.10.8.60 318 417 2.6E-37 T 22-04-2016 VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 SMART SM00382 113 266 2.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 SUPERFAMILY SSF52540 65 404 2.06E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 Gene3D G3DSA:3.40.50.300 66 255 4.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 Gene3D G3DSA:3.40.50.300 296 312 4.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 SMART SM00994 13 52 1.0E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 414 5.0E-210 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VCLMA_RS08825 f004306cd6c6fff78eafdecb29f324f5 426 SUPERFAMILY SSF57716 14 49 5.84E-12 T 22-04-2016 VCLMA_RS12170 caeb6cb75db12f9667accd77f724fa45 281 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 206 1.9E-58 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VCLMA_RS12170 caeb6cb75db12f9667accd77f724fa45 281 PANTHER PTHR10285:SF72 1 276 9.9E-141 T 22-04-2016 VCLMA_RS12170 caeb6cb75db12f9667accd77f724fa45 281 PRINTS PR00478 Phosphoribulokinase family signature 174 197 3.8E-14 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VCLMA_RS12170 caeb6cb75db12f9667accd77f724fa45 281 PRINTS PR00478 Phosphoribulokinase family signature 10 27 3.8E-14 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VCLMA_RS12170 caeb6cb75db12f9667accd77f724fa45 281 PRINTS PR00478 Phosphoribulokinase family signature 124 142 3.8E-14 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 VCLMA_RS12170 caeb6cb75db12f9667accd77f724fa45 281 Gene3D G3DSA:3.40.50.300 1 280 2.9E-114 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12170 caeb6cb75db12f9667accd77f724fa45 281 SUPERFAMILY SSF52540 4 278 1.73E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12170 caeb6cb75db12f9667accd77f724fa45 281 PANTHER PTHR10285 1 276 9.9E-141 T 22-04-2016 VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 PANTHER PTHR30520:SF4 11 227 6.4E-106 T 22-04-2016 VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 PANTHER PTHR30520:SF4 244 277 6.4E-106 T 22-04-2016 VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 Pfam PF01226 Formate/nitrite transporter 14 275 1.0E-76 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 PANTHER PTHR30520 11 227 6.4E-106 T 22-04-2016 VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 PANTHER PTHR30520 244 277 6.4E-106 T 22-04-2016 VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 1.3E-112 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 167 177 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 2.5E-80 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07895 507012b280ae4fee8b3dfacd7d819924 280 Gene3D G3DSA:1.20.1080.10 30 279 6.4E-89 T 22-04-2016 IPR023271 Aquaporin-like VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 403 463 1.0E-12 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 SMART SM01231 403 463 7.6E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 629 5.58E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 648 5.58E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 595 605 5.58E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 PRINTS PR00344 Bacterial sensor protein C-terminal signature 553 567 5.58E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 SUPERFAMILY SSF47226 6 128 3.27E-30 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Gene3D G3DSA:2.30.30.40 740 784 2.8E-21 T 22-04-2016 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Gene3D G3DSA:2.30.30.40 651 672 2.8E-21 T 22-04-2016 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Gene3D G3DSA:3.30.565.10 466 650 5.7E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Gene3D G3DSA:1.20.120.160 5 141 5.1E-42 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 SMART SM00073 6 103 1.1E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 511 650 1.8E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Pfam PF01584 CheW-like domain 657 786 3.0E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 PANTHER PTHR22617:SF6 214 786 9.1E-294 T 22-04-2016 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 PANTHER PTHR22617:SF6 1 152 9.1E-294 T 22-04-2016 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 SMART SM00387 508 651 3.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 PANTHER PTHR22617 214 786 9.1E-294 T 22-04-2016 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 PANTHER PTHR22617 1 152 9.1E-294 T 22-04-2016 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 SUPERFAMILY SSF55874 466 649 1.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Pfam PF01627 Hpt domain 8 100 1.7E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Gene3D G3DSA:1.10.287.560 403 464 4.2E-19 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 SUPERFAMILY SSF50341 650 784 1.57E-28 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 Gene3D G3DSA:2.40.50.180 675 739 2.7E-11 T 22-04-2016 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 SUPERFAMILY SSF47384 404 464 4.71E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS09510 6b2266ed2d71ac3df40b18dd8d005af1 793 SMART SM00260 643 784 1.1E-32 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 Gene3D G3DSA:3.50.50.60 360 417 2.6E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 Gene3D G3DSA:3.50.50.60 108 122 2.6E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 Gene3D G3DSA:3.50.50.60 2 55 2.6E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 Gene3D G3DSA:3.50.50.60 190 269 2.6E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 Pfam PF01266 FAD dependent oxidoreductase 3 397 3.4E-65 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 47.483 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 SUPERFAMILY SSF54373 270 360 1.57E-16 T 22-04-2016 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 PANTHER PTHR13847:SF148 1 63 5.4E-242 T 22-04-2016 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 PANTHER PTHR13847:SF148 107 418 5.4E-242 T 22-04-2016 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 Gene3D G3DSA:3.30.9.10 270 359 3.6E-15 T 22-04-2016 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 Gene3D G3DSA:3.30.9.10 134 189 3.6E-15 T 22-04-2016 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 PANTHER PTHR13847 1 63 5.4E-242 T 22-04-2016 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 PANTHER PTHR13847 107 418 5.4E-242 T 22-04-2016 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 SUPERFAMILY SSF51905 1 54 5.57E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 SUPERFAMILY SSF51905 360 416 5.57E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03815 ac5c00ef9830327c81087f7a5087cabf 420 SUPERFAMILY SSF51905 107 270 5.57E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PANTHER PTHR24423 149 164 4.2E-84 T 22-04-2016 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PANTHER PTHR24423 183 216 4.2E-84 T 22-04-2016 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PANTHER PTHR24423 28 53 4.2E-84 T 22-04-2016 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PANTHER PTHR24423 236 425 4.2E-84 T 22-04-2016 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PANTHER PTHR24423:SF450 149 164 4.2E-84 T 22-04-2016 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PANTHER PTHR24423:SF450 183 216 4.2E-84 T 22-04-2016 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PANTHER PTHR24423:SF450 28 53 4.2E-84 T 22-04-2016 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PANTHER PTHR24423:SF450 236 425 4.2E-84 T 22-04-2016 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 SUPERFAMILY SSF55874 268 426 1.31E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 Gene3D G3DSA:3.30.565.10 274 425 3.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 SMART SM00387 312 428 1.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 7.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 7.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 7.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 7.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 SUPERFAMILY SSF47384 177 222 3.53E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 264 5.1E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05100 8616491d1adc46ec2ad239e299bf755e 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 315 426 8.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 6.4E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.2E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 SUPERFAMILY SSF64518 1 376 1.83E-97 T 22-04-2016 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 PRINTS PR00207 Flagellin signature 76 95 1.1E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 PRINTS PR00207 Flagellin signature 111 134 1.1E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 PRINTS PR00207 Flagellin signature 37 54 1.1E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 PANTHER PTHR30244 2 376 7.3E-171 T 22-04-2016 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 PANTHER PTHR30244:SF1 2 376 7.3E-171 T 22-04-2016 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 Gene3D G3DSA:1.20.1330.10 55 171 3.6E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 Gene3D G3DSA:1.20.1330.10 279 332 3.6E-62 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS10145 c62e5ac8acf35ea09fccfe4ac6c129a2 377 Pfam PF07196 Flagellin hook IN motif 194 249 1.9E-11 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VCLMA_RS05870 10808b977d27643e7054c860d0053341 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 2 251 47.937 T 22-04-2016 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VCLMA_RS05870 10808b977d27643e7054c860d0053341 251 Pfam PF00005 ABC transporter 15 164 2.4E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS05870 10808b977d27643e7054c860d0053341 251 SUPERFAMILY SSF52540 16 231 4.99E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05870 10808b977d27643e7054c860d0053341 251 Gene3D G3DSA:3.40.50.300 16 228 1.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05870 10808b977d27643e7054c860d0053341 251 PANTHER PTHR24220 1 238 3.5E-143 T 22-04-2016 VCLMA_RS05870 10808b977d27643e7054c860d0053341 251 PANTHER PTHR24220:SF547 1 238 3.5E-143 T 22-04-2016 VCLMA_RS05870 10808b977d27643e7054c860d0053341 251 SMART SM00382 22 213 1.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 SUPERFAMILY SSF141868 591 838 1.24E-82 T 22-04-2016 IPR001633 EAL domain VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 423 568 6.7E-21 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 Pfam PF02743 Cache domain 38 323 2.9E-17 T 22-04-2016 IPR033479 Double Cache domain 1 VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 SMART SM00267 411 574 4.6E-33 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 SUPERFAMILY SSF158472 364 413 9.42E-5 T 22-04-2016 VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 Pfam PF00990 Diguanylate cyclase, GGDEF domain 424 568 6.5E-28 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 SMART SM00052 584 832 6.6E-102 T 22-04-2016 IPR001633 EAL domain VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 Gene3D G3DSA:3.20.20.450 589 833 1.7E-89 T 22-04-2016 IPR001633 EAL domain VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 Pfam PF00672 HAMP domain 344 412 7.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 Gene3D G3DSA:3.30.450.20 104 218 1.5E-12 T 22-04-2016 VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 Pfam PF00563 EAL domain 591 827 5.9E-72 T 22-04-2016 IPR001633 EAL domain VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 SUPERFAMILY SSF55073 427 569 7.85E-29 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 Gene3D G3DSA:3.30.70.270 424 580 3.5E-33 T 22-04-2016 VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 PANTHER PTHR33121 469 842 1.4E-80 T 22-04-2016 VCLMA_RS12815 eaf8d41d75f6413239b342045064c7cf 843 PANTHER PTHR33121:SF13 469 842 1.4E-80 T 22-04-2016 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 SUPERFAMILY SSF55124 351 428 2.13E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 PANTHER PTHR11493:SF47 20 566 3.1E-272 T 22-04-2016 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 SUPERFAMILY SSF56014 434 566 3.66E-32 T 22-04-2016 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 24 565 1.1E-278 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 SUPERFAMILY SSF55124 19 150 2.62E-27 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 15 577 58.138 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 SUPERFAMILY SSF56014 154 349 7.07E-58 T 22-04-2016 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 484 500 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 PANTHER PTHR11493 20 566 3.1E-272 T 22-04-2016 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 Gene3D G3DSA:3.30.413.10 154 344 2.5E-70 T 22-04-2016 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 Gene3D G3DSA:3.30.413.10 434 564 4.0E-34 T 22-04-2016 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 84 143 5.8E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 358 422 5.5E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 Gene3D G3DSA:3.90.480.10 347 427 3.7E-62 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 Gene3D G3DSA:3.90.480.10 79 151 3.7E-62 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 178 334 1.5E-45 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 545 1.4E-4 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 PRINTS PR00397 Sirohaem Fe-binding site signature 484 502 2.4E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS01925 4c3b4f28778200e761bdae090b47f210 577 PRINTS PR00397 Sirohaem Fe-binding site signature 435 453 2.4E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 VCLMA_RS05430 ebd1681e7c82941678657c25b4e90cbf 195 PANTHER PTHR36121:SF1 1 193 9.3E-52 T 22-04-2016 VCLMA_RS05430 ebd1681e7c82941678657c25b4e90cbf 195 PANTHER PTHR36121 1 193 9.3E-52 T 22-04-2016 VCLMA_RS05430 ebd1681e7c82941678657c25b4e90cbf 195 Gene3D G3DSA:3.30.1460.30 2 100 4.1E-28 T 22-04-2016 IPR007076 TfoX, N-terminal VCLMA_RS05430 ebd1681e7c82941678657c25b4e90cbf 195 PIRSF PIRSF028788 3 195 3.4E-34 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VCLMA_RS05430 ebd1681e7c82941678657c25b4e90cbf 195 Gene3D G3DSA:1.10.150.20 112 194 5.3E-29 T 22-04-2016 VCLMA_RS05430 ebd1681e7c82941678657c25b4e90cbf 195 Pfam PF04994 TfoX C-terminal domain 112 190 5.4E-28 T 22-04-2016 IPR007077 TfoX, C-terminal VCLMA_RS05430 ebd1681e7c82941678657c25b4e90cbf 195 SUPERFAMILY SSF159894 3 100 2.25E-26 T 22-04-2016 VCLMA_RS05430 ebd1681e7c82941678657c25b4e90cbf 195 Pfam PF04993 TfoX N-terminal domain 9 99 1.1E-23 T 22-04-2016 IPR007076 TfoX, N-terminal VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 PANTHER PTHR11911 176 321 6.3E-42 T 22-04-2016 VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 Pfam PF00571 CBS domain 270 321 6.8E-6 T 22-04-2016 IPR000644 CBS domain VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 Pfam PF00571 CBS domain 205 259 8.5E-5 T 22-04-2016 IPR000644 CBS domain VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 SMART SM00116 276 323 0.53 T 22-04-2016 IPR000644 CBS domain VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 SMART SM00116 211 259 1.8 T 22-04-2016 IPR000644 CBS domain VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 PIRSF PIRSF004692 1 324 1.3E-131 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 Gene3D G3DSA:3.10.580.10 193 321 1.1E-37 T 22-04-2016 VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 Pfam PF01380 SIS domain 42 173 3.4E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 SUPERFAMILY SSF53697 7 319 5.12E-70 T 22-04-2016 VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 Gene3D G3DSA:3.40.50.10490 10 192 3.4E-54 T 22-04-2016 VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 PANTHER PTHR11911:SF90 176 321 6.3E-42 T 22-04-2016 VCLMA_RS11740 e7899ef351b1dfab6623c22a0f08dc16 324 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 46 314 1.4E-116 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VCLMA_RS07975 243a716fd14bcf26d1d81c5a879440ff 194 PANTHER PTHR30086:SF12 1 194 5.7E-64 T 22-04-2016 VCLMA_RS07975 243a716fd14bcf26d1d81c5a879440ff 194 Pfam PF01810 LysE type translocator 17 187 1.2E-13 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS07975 243a716fd14bcf26d1d81c5a879440ff 194 PANTHER PTHR30086 1 194 5.7E-64 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 PANTHER PTHR10438 1 112 4.8E-58 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 PANTHER PTHR10438 200 221 4.8E-58 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 Pfam PF00085 Thioredoxin 7 108 9.9E-14 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 Gene3D G3DSA:1.25.40.10 197 284 4.5E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 Pfam PF14561 Tetratricopeptide repeat 195 284 9.5E-27 T 22-04-2016 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 Pfam PF14559 Tetratricopeptide repeat 124 190 1.3E-12 T 22-04-2016 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 SUPERFAMILY SSF48452 111 246 1.24E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 SUPERFAMILY SSF52833 4 114 2.25E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 PANTHER PTHR10438:SF288 1 112 4.8E-58 T 22-04-2016 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 PANTHER PTHR10438:SF288 200 221 4.8E-58 T 22-04-2016 VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 Gene3D G3DSA:3.40.30.10 5 109 1.1E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS04570 6eb242baecdb5fa385ba89445ed50790 284 Gene3D G3DSA:1.25.40.10 110 196 2.4E-27 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS10720 62deefbe9e11cce2d739a60fadbd0d44 403 SUPERFAMILY SSF53383 3 400 4.57E-126 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS10720 62deefbe9e11cce2d739a60fadbd0d44 403 Gene3D G3DSA:3.40.640.10 35 282 9.5E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS10720 62deefbe9e11cce2d739a60fadbd0d44 403 PANTHER PTHR11601 5 403 2.1E-182 T 22-04-2016 VCLMA_RS10720 62deefbe9e11cce2d739a60fadbd0d44 403 PIRSF PIRSF005572 21 403 1.6E-55 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VCLMA_RS10720 62deefbe9e11cce2d739a60fadbd0d44 403 Pfam PF00266 Aminotransferase class-V 24 392 2.2E-154 T 22-04-2016 IPR000192 Aminotransferase class V domain VCLMA_RS10720 62deefbe9e11cce2d739a60fadbd0d44 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 401 8.6E-168 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VCLMA_RS10720 62deefbe9e11cce2d739a60fadbd0d44 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 403 7.4E-157 T 22-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VCLMA_RS10720 62deefbe9e11cce2d739a60fadbd0d44 403 Gene3D G3DSA:3.90.1150.10 283 398 1.4E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS10720 62deefbe9e11cce2d739a60fadbd0d44 403 PANTHER PTHR11601:SF17 5 403 2.1E-182 T 22-04-2016 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 SUPERFAMILY SSF52413 306 412 1.31E-23 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 4 410 5.1E-124 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 Gene3D G3DSA:1.20.5.100 206 235 4.2E-6 T 22-04-2016 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 Gene3D G3DSA:3.40.50.720 4 202 4.6E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 SUPERFAMILY SSF48179 206 299 5.78E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 PIRSF PIRSF500136 1 413 2.8E-147 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 SUPERFAMILY SSF51735 4 199 2.52E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 4 188 7.6E-59 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 SMART SM00984 316 413 1.8E-21 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 PIRSF PIRSF000124 3 413 2.2E-82 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 PANTHER PTHR11374:SF4 2 412 1.4E-189 T 22-04-2016 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 PANTHER PTHR11374 2 412 1.4E-189 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 Gene3D G3DSA:3.40.50.720 238 412 4.2E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 316 412 2.0E-21 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 VCLMA_RS04310 00565894b6aa870b7b808f53dac90c95 413 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 2.1E-26 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 PANTHER PTHR24031:SF273 1 397 0.0 T 22-04-2016 VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 PANTHER PTHR24031 1 397 0.0 T 22-04-2016 VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 Gene3D G3DSA:3.40.50.300 1 217 1.5E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.0E-50 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 SMART SM00490 257 338 7.7E-29 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 Pfam PF00271 Helicase conserved C-terminal domain 232 337 2.8E-26 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 Gene3D G3DSA:3.40.50.300 218 370 2.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 SUPERFAMILY SSF52540 73 358 5.16E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06635 e1a40c24d89197d369e400084d02c7fa 397 SMART SM00487 20 221 4.3E-62 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 SUPERFAMILY SSF50022 30 192 1.41E-42 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 4 40 1.3E-14 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 PANTHER PTHR10134 1 194 7.9E-125 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 Pfam PF00355 Rieske [2Fe-2S] domain 55 175 1.5E-11 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 8.14E-8 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 8.14E-8 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 8.14E-8 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 8.9E-75 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 Gene3D G3DSA:2.102.10.10 8 192 3.8E-40 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VCLMA_RS02800 91148d6bf5ae936b4f1d5af6edaac477 197 PANTHER PTHR10134:SF8 1 194 7.9E-125 T 22-04-2016 VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 2.9E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 2.9E-22 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 30 1.6E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 9 141 6.5E-59 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 SUPERFAMILY SSF54523 35 141 1.73E-38 T 22-04-2016 VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 PANTHER PTHR30093 1 145 3.2E-76 T 22-04-2016 VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 PANTHER PTHR30093:SF9 1 145 3.2E-76 T 22-04-2016 VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 Gene3D G3DSA:3.30.700.10 10 74 7.8E-9 T 22-04-2016 VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 Pfam PF08334 Type II secretion system (T2SS), protein G 32 140 2.2E-43 T 22-04-2016 IPR013545 Type II secretion system protein G VCLMA_RS12720 4d103ac3cd88fd21537ff76dbd077629 146 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 27 1.4E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 Pfam PF01266 FAD dependent oxidoreductase 266 634 6.4E-47 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 Gene3D G3DSA:3.50.50.60 265 343 2.8E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 Gene3D G3DSA:3.50.50.60 397 480 2.8E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 Gene3D G3DSA:3.50.50.60 574 643 2.8E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 PANTHER PTHR13847:SF182 605 667 7.5E-171 T 22-04-2016 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 PANTHER PTHR13847:SF182 224 588 7.5E-171 T 22-04-2016 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 SUPERFAMILY SSF51905 574 657 4.99E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 SUPERFAMILY SSF51905 266 481 4.99E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 664 1.8E-156 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 PANTHER PTHR13847 605 667 7.5E-171 T 22-04-2016 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 PANTHER PTHR13847 224 588 7.5E-171 T 22-04-2016 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 Gene3D G3DSA:3.40.50.150 9 248 6.4E-103 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 242 6.0E-47 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 VCLMA_RS09725 d21c161e914e2b5317beaadf92d292cc 671 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 659 28.131 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.0E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.0E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.0E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 Gene3D G3DSA:1.10.10.10 2 53 2.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 SMART SM00344 1 110 1.4E-31 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 SUPERFAMILY SSF46785 1 59 4.34E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 PANTHER PTHR30154 1 136 7.9E-87 T 22-04-2016 VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 PANTHER PTHR30154:SF23 1 136 7.9E-87 T 22-04-2016 VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 Gene3D G3DSA:3.30.70.920 54 136 7.1E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 8.1E-17 T 22-04-2016 VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 Pfam PF01037 Lrp/AsnC ligand binding domain 68 136 2.2E-12 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCLMA_RS07980 1f6e0cf1332071cbe243d7d3c2f1f9b2 137 SUPERFAMILY SSF54909 63 136 9.52E-11 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VCLMA_RS10775 d9bc1a48ddd4a6046e909aa8080a6f1c 322 Pfam PF03595 Voltage-dependent anion channel 19 308 2.2E-30 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VCLMA_RS10775 d9bc1a48ddd4a6046e909aa8080a6f1c 322 PANTHER PTHR37955 1 322 1.5E-105 T 22-04-2016 VCLMA_RS10775 d9bc1a48ddd4a6046e909aa8080a6f1c 322 PANTHER PTHR37955:SF1 1 322 1.5E-105 T 22-04-2016 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 Pfam PF00672 HAMP domain 323 393 4.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 SUPERFAMILY SSF103190 150 307 2.88E-15 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 SUPERFAMILY SSF47384 440 509 8.44E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 Gene3D G3DSA:1.10.287.130 440 497 1.3E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 SMART SM00387 555 666 1.3E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 Pfam PF17202 Single cache domain 3 201 314 6.5E-25 T 22-04-2016 IPR033463 Single cache domain 3 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 Gene3D G3DSA:3.30.565.10 498 666 3.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 SMART SM00388 445 512 5.7E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PANTHER PTHR24423:SF532 441 663 2.5E-210 T 22-04-2016 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PANTHER PTHR24423:SF532 336 392 2.5E-210 T 22-04-2016 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PANTHER PTHR24423:SF532 19 280 2.5E-210 T 22-04-2016 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PANTHER PTHR24423 441 663 2.5E-210 T 22-04-2016 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PANTHER PTHR24423 336 392 2.5E-210 T 22-04-2016 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PANTHER PTHR24423 19 280 2.5E-210 T 22-04-2016 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 559 665 2.8E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 625 4.5E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 663 4.5E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 626 644 4.5E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 611 4.5E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 445 510 1.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07055 661786ba0d068fe5f29bdb5a4743bfe4 677 SUPERFAMILY SSF55874 502 664 1.2E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06365 78dbc7aee1ab6a7f4afbe7e1278b3480 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 4 213 7.2E-94 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 VCLMA_RS06365 78dbc7aee1ab6a7f4afbe7e1278b3480 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 78 1.7E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VCLMA_RS06365 78dbc7aee1ab6a7f4afbe7e1278b3480 214 Pfam PF14497 Glutathione S-transferase, C-terminal domain 122 203 3.1E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal VCLMA_RS06365 78dbc7aee1ab6a7f4afbe7e1278b3480 214 PANTHER PTHR11260:SF289 1 213 1.1E-123 T 22-04-2016 VCLMA_RS06365 78dbc7aee1ab6a7f4afbe7e1278b3480 214 Gene3D G3DSA:1.20.1050.10 98 213 6.4E-52 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VCLMA_RS06365 78dbc7aee1ab6a7f4afbe7e1278b3480 214 PANTHER PTHR11260 1 213 1.1E-123 T 22-04-2016 VCLMA_RS06365 78dbc7aee1ab6a7f4afbe7e1278b3480 214 Gene3D G3DSA:3.40.30.10 3 97 9.8E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS06365 78dbc7aee1ab6a7f4afbe7e1278b3480 214 SUPERFAMILY SSF47616 84 212 1.71E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VCLMA_RS06365 78dbc7aee1ab6a7f4afbe7e1278b3480 214 SUPERFAMILY SSF52833 2 88 4.58E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 Gene3D G3DSA:3.50.50.60 256 305 2.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 Gene3D G3DSA:3.50.50.60 2 103 2.6E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 PANTHER PTHR10617:SF103 247 306 6.0E-86 T 22-04-2016 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 PANTHER PTHR10617 247 306 6.0E-86 T 22-04-2016 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 PANTHER PTHR10617 1 203 6.0E-86 T 22-04-2016 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 SUPERFAMILY SSF160996 107 255 1.96E-42 T 22-04-2016 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 Pfam PF03486 HI0933-like protein 2 306 2.0E-110 T 22-04-2016 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 Gene3D G3DSA:1.10.8.260 187 238 8.1E-25 T 22-04-2016 IPR023166 HI0933 insert-like domain VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 PANTHER PTHR10617:SF103 1 203 6.0E-86 T 22-04-2016 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 Gene3D G3DSA:2.40.30.10 106 186 2.8E-28 T 22-04-2016 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 SUPERFAMILY SSF51905 254 305 9.12E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 SUPERFAMILY SSF51905 2 105 9.12E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS13315 07ce6674a0e27e6b3a86202eb1c497da 306 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 2 306 3.0E-90 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 SMART SM00495 520 565 0.0022 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 SMART SM00495 438 480 6.0E-18 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 PANTHER PTHR22595 54 358 4.6E-154 T 22-04-2016 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 PANTHER PTHR22595:SF49 54 358 4.6E-154 T 22-04-2016 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 SUPERFAMILY SSF51055 431 481 6.67E-17 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 Pfam PF02839 Carbohydrate binding domain 438 477 5.3E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 Gene3D G3DSA:1.10.530.10 248 338 6.1E-35 T 22-04-2016 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 Gene3D G3DSA:1.10.530.10 90 153 6.1E-35 T 22-04-2016 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 Gene3D G3DSA:3.30.20.10 190 247 9.7E-22 T 22-04-2016 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 Pfam PF00182 Chitinase class I 106 325 1.5E-31 T 22-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 SUPERFAMILY SSF53955 87 350 6.75E-55 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS03735 9f82b8f47f7236e1893cf1f321875511 567 Gene3D G3DSA:2.10.10.20 435 481 3.2E-21 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 367 5.7E-187 T 22-04-2016 IPR010162 Peptidase M20B, peptidase T VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 PANTHER PTHR11014:SF61 1 365 7.8E-153 T 22-04-2016 VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 Gene3D G3DSA:3.40.630.10 287 364 4.7E-72 T 22-04-2016 VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 Gene3D G3DSA:3.40.630.10 4 177 4.7E-72 T 22-04-2016 VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 SUPERFAMILY SSF55031 179 289 3.79E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 SUPERFAMILY SSF53187 7 177 1.2E-59 T 22-04-2016 VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 SUPERFAMILY SSF53187 287 365 1.2E-59 T 22-04-2016 VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 Gene3D G3DSA:3.30.70.360 178 282 9.7E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 PANTHER PTHR11014 1 365 7.8E-153 T 22-04-2016 VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 Pfam PF07687 Peptidase dimerisation domain 185 273 9.1E-13 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS06345 ad99b55c2ecdad52b98fad53c73d5ca1 368 Pfam PF01546 Peptidase family M20/M25/M40 72 365 4.4E-21 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VCLMA_RS00450 10cb7641c86ef5eadd4210d52d83113f 133 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 81 9.5E-35 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VCLMA_RS00450 10cb7641c86ef5eadd4210d52d83113f 133 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 124 18.531 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VCLMA_RS00450 10cb7641c86ef5eadd4210d52d83113f 133 Pfam PF02416 mttA/Hcf106 family 4 36 6.7E-6 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VCLMA_RS00450 10cb7641c86ef5eadd4210d52d83113f 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.5E-26 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VCLMA_RS00450 10cb7641c86ef5eadd4210d52d83113f 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.5E-26 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VCLMA_RS00450 10cb7641c86ef5eadd4210d52d83113f 133 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.5E-26 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 VCLMA_RS00450 10cb7641c86ef5eadd4210d52d83113f 133 PANTHER PTHR33162:SF4 2 126 1.7E-52 T 22-04-2016 VCLMA_RS00450 10cb7641c86ef5eadd4210d52d83113f 133 Gene3D G3DSA:1.10.287.880 42 73 6.2E-4 T 22-04-2016 VCLMA_RS00450 10cb7641c86ef5eadd4210d52d83113f 133 PANTHER PTHR33162 2 126 1.7E-52 T 22-04-2016 VCLMA_RS03330 dc819d44120b88f96be3db1183be1252 171 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 10 167 17.1 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VCLMA_RS03330 dc819d44120b88f96be3db1183be1252 171 Pfam PF01252 Signal peptidase (SPase) II 19 161 1.1E-36 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VCLMA_RS03330 dc819d44120b88f96be3db1183be1252 171 TIGRFAM TIGR00077 lspA: signal peptidase II 8 166 3.0E-50 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VCLMA_RS03330 dc819d44120b88f96be3db1183be1252 171 ProSitePatterns PS00855 Signal peptidases II signature. 109 121 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VCLMA_RS03330 dc819d44120b88f96be3db1183be1252 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 58 66 1.7E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VCLMA_RS03330 dc819d44120b88f96be3db1183be1252 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 106 121 1.7E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VCLMA_RS03330 dc819d44120b88f96be3db1183be1252 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 142 158 1.7E-18 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VCLMA_RS03330 dc819d44120b88f96be3db1183be1252 171 PANTHER PTHR33695:SF1 12 168 1.9E-56 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 VCLMA_RS03330 dc819d44120b88f96be3db1183be1252 171 PANTHER PTHR33695 12 168 1.9E-56 T 22-04-2016 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 SUPERFAMILY SSF55681 118 431 1.94E-97 T 22-04-2016 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 PIRSF PIRSF001529 1 435 3.4E-190 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 PANTHER PTHR11778:SF0 1 434 7.9E-212 T 22-04-2016 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 39.98 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 Gene3D G3DSA:1.10.287.40 1 106 1.0E-22 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 230 411 5.7E-34 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 PANTHER PTHR11778 1 434 7.9E-212 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 Gene3D G3DSA:3.30.930.10 107 431 6.8E-139 T 22-04-2016 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.0E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.0E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.0E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.0E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.0E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.0E-28 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 SUPERFAMILY SSF46589 1 114 5.75E-26 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 VCLMA_RS05215 8d37a7a013cd5e748a62da476398058a 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 1.3E-172 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 VCLMA_RS08040 600ffd8542fb967196aadef068bf2a98 272 Gene3D G3DSA:3.40.50.1820 20 268 4.4E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS08040 600ffd8542fb967196aadef068bf2a98 272 PRINTS PR00412 Epoxide hydrolase signature 244 266 4.4E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS08040 600ffd8542fb967196aadef068bf2a98 272 PRINTS PR00412 Epoxide hydrolase signature 31 49 4.4E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS08040 600ffd8542fb967196aadef068bf2a98 272 PRINTS PR00412 Epoxide hydrolase signature 212 228 4.4E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS08040 600ffd8542fb967196aadef068bf2a98 272 Pfam PF00561 alpha/beta hydrolase fold 26 129 7.1E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS08040 600ffd8542fb967196aadef068bf2a98 272 SUPERFAMILY SSF53474 18 269 5.93E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS08040 600ffd8542fb967196aadef068bf2a98 272 PANTHER PTHR10992:SF756 24 269 3.0E-56 T 22-04-2016 VCLMA_RS08040 600ffd8542fb967196aadef068bf2a98 272 PANTHER PTHR10992 24 269 3.0E-56 T 22-04-2016 VCLMA_RS10795 55ccad056396ff53d23dd76d4a52572b 394 Pfam PF05940 NnrS protein 16 388 1.1E-107 T 22-04-2016 IPR010266 NnrS VCLMA_RS07045 eb4e4c09c68d647c67aa534764791a15 277 PIRSF PIRSF015626 1 271 7.9E-105 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 VCLMA_RS07045 eb4e4c09c68d647c67aa534764791a15 277 SUPERFAMILY SSF53927 15 267 4.51E-73 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VCLMA_RS07045 eb4e4c09c68d647c67aa534764791a15 277 Gene3D G3DSA:3.10.20.10 36 118 1.2E-16 T 22-04-2016 VCLMA_RS07045 eb4e4c09c68d647c67aa534764791a15 277 PANTHER PTHR30592:SF2 1 276 3.6E-195 T 22-04-2016 VCLMA_RS07045 eb4e4c09c68d647c67aa534764791a15 277 Pfam PF02634 FdhD/NarQ family 35 266 6.9E-75 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 VCLMA_RS07045 eb4e4c09c68d647c67aa534764791a15 277 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 32 264 1.4E-42 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 VCLMA_RS07045 eb4e4c09c68d647c67aa534764791a15 277 Gene3D G3DSA:3.40.140.10 133 272 6.9E-54 T 22-04-2016 VCLMA_RS07045 eb4e4c09c68d647c67aa534764791a15 277 PANTHER PTHR30592 1 276 3.6E-195 T 22-04-2016 VCLMA_RS12375 9ad27f40990f51c271f0e5ee65197931 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-64 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VCLMA_RS12375 9ad27f40990f51c271f0e5ee65197931 127 Gene3D G3DSA:1.20.1300.10 1 127 5.9E-53 T 22-04-2016 VCLMA_RS12375 9ad27f40990f51c271f0e5ee65197931 127 PIRSF PIRSF000180 1 127 2.5E-55 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VCLMA_RS12375 9ad27f40990f51c271f0e5ee65197931 127 SUPERFAMILY SSF81343 1 127 2.4E-52 T 22-04-2016 VCLMA_RS12375 9ad27f40990f51c271f0e5ee65197931 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 27.256 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VCLMA_RS12375 9ad27f40990f51c271f0e5ee65197931 127 Pfam PF02300 Fumarate reductase subunit C 2 127 4.2E-49 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 SUPERFAMILY SSF55031 177 290 3.59E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 Gene3D G3DSA:3.40.630.10 6 185 2.8E-58 T 22-04-2016 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 Gene3D G3DSA:3.40.630.10 319 377 2.8E-58 T 22-04-2016 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 PANTHER PTHR11014 6 377 1.0E-217 T 22-04-2016 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 62.434 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 SUPERFAMILY SSF53187 4 176 9.71E-54 T 22-04-2016 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 SUPERFAMILY SSF53187 301 377 9.71E-54 T 22-04-2016 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 Pfam PF01546 Peptidase family M20/M25/M40 72 374 7.5E-32 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 Gene3D G3DSA:3.30.70.360 186 287 7.9E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 PANTHER PTHR11014:SF75 6 377 1.0E-217 T 22-04-2016 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 Pfam PF07687 Peptidase dimerisation domain 174 285 1.4E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS12325 a1483db9c94bb4f5681c4120e653f72e 378 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 1.1E-122 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 VCLMA_RS08580 f4854383de8887c51927d890d2d81376 246 PANTHER PTHR30352 1 246 8.2E-148 T 22-04-2016 VCLMA_RS08580 f4854383de8887c51927d890d2d81376 246 SUPERFAMILY SSF102114 23 220 1.31E-30 T 22-04-2016 VCLMA_RS08580 f4854383de8887c51927d890d2d81376 246 Pfam PF04055 Radical SAM superfamily 24 178 6.3E-32 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS08580 f4854383de8887c51927d890d2d81376 246 Gene3D G3DSA:3.80.30.10 69 245 2.2E-72 T 22-04-2016 VCLMA_RS08580 f4854383de8887c51927d890d2d81376 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VCLMA_RS08580 f4854383de8887c51927d890d2d81376 246 PANTHER PTHR30352:SF9 1 246 8.2E-148 T 22-04-2016 VCLMA_RS08580 f4854383de8887c51927d890d2d81376 246 Pfam PF13353 4Fe-4S single cluster domain 16 133 5.3E-20 T 22-04-2016 VCLMA_RS08580 f4854383de8887c51927d890d2d81376 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 1.2E-109 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 2.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 408 2.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 369 2.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 383 2.3E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 3.7E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 SUPERFAMILY SSF47384 195 277 8.83E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 SUPERFAMILY SSF55874 266 431 2.36E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 PANTHER PTHR24423 153 431 2.1E-57 T 22-04-2016 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 Gene3D G3DSA:3.30.565.10 264 432 3.6E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 Pfam PF00672 HAMP domain 142 207 1.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 Gene3D G3DSA:1.10.287.130 202 263 1.0E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 SMART SM00388 212 277 2.4E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 SMART SM00387 320 430 5.6E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 SUPERFAMILY SSF158472 160 209 2.22E-5 T 22-04-2016 VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 428 1.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06230 729bd47da12d0f3a150170d585b65ff9 440 SMART SM00304 159 211 7.3E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF50447 165 288 4.32E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 4.7E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF00679 Elongation factor G C-terminus 399 481 1.8E-19 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.30.70.240 401 489 1.1E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.5E-52 T 22-04-2016 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.4E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.40.50.300 2 192 8.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:2.40.30.10 193 289 3.0E-24 T 22-04-2016 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 5.6E-17 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 Gene3D G3DSA:3.30.70.870 291 369 1.0E-25 T 22-04-2016 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 PANTHER PTHR23115 397 595 8.9E-281 T 22-04-2016 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 PANTHER PTHR23115 2 373 8.9E-281 T 22-04-2016 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 2.6E-301 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF54980 292 370 1.37E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF52540 2 205 1.58E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 SUPERFAMILY SSF54980 399 493 2.45E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.345 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 PANTHER PTHR23115:SF175 397 595 8.9E-281 T 22-04-2016 VCLMA_RS11410 e8f3d6b2c7fd49e91787300dfa125e7e 597 PANTHER PTHR23115:SF175 2 373 8.9E-281 T 22-04-2016 VCLMA_RS00610 01f9dab16528320a7d82b42ad06c2c93 104 Gene3D G3DSA:3.30.920.10 1 103 3.7E-34 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VCLMA_RS00610 01f9dab16528320a7d82b42ad06c2c93 104 Pfam PF01491 Frataxin-like domain 1 100 2.3E-29 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VCLMA_RS00610 01f9dab16528320a7d82b42ad06c2c93 104 Hamap MF_00142 Protein CyaY [cyaY]. 1 103 27.197 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VCLMA_RS00610 01f9dab16528320a7d82b42ad06c2c93 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 22-04-2016 IPR020895 Frataxin conserved site VCLMA_RS00610 01f9dab16528320a7d82b42ad06c2c93 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 9.7E-42 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VCLMA_RS00610 01f9dab16528320a7d82b42ad06c2c93 104 SUPERFAMILY SSF55387 1 103 8.55E-39 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VCLMA_RS00610 01f9dab16528320a7d82b42ad06c2c93 104 SMART SM01219 1 104 6.7E-54 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VCLMA_RS00610 01f9dab16528320a7d82b42ad06c2c93 104 PANTHER PTHR16821 1 103 1.1E-39 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 VCLMA_RS08540 1df662492823bb18af1d9706ac80e690 225 PANTHER PTHR30450 1 225 2.0E-168 T 22-04-2016 VCLMA_RS08540 1df662492823bb18af1d9706ac80e690 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 9.8E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VCLMA_RS08540 1df662492823bb18af1d9706ac80e690 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 217 9.7E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS08540 1df662492823bb18af1d9706ac80e690 225 SUPERFAMILY SSF161098 11 203 2.62E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS08540 1df662492823bb18af1d9706ac80e690 225 Gene3D G3DSA:1.10.3720.10 11 217 8.5E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS08540 1df662492823bb18af1d9706ac80e690 225 PANTHER PTHR30450:SF4 1 225 2.0E-168 T 22-04-2016 VCLMA_RS12660 e47c22d3865870f2b3063bdfb7678932 253 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 9 250 8.6E-118 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VCLMA_RS12660 e47c22d3865870f2b3063bdfb7678932 253 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 3 252 44.354 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 VCLMA_RS12660 e47c22d3865870f2b3063bdfb7678932 253 Gene3D G3DSA:3.40.50.1820 3 251 1.9E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS12660 e47c22d3865870f2b3063bdfb7678932 253 SUPERFAMILY SSF53474 3 250 7.56E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS12660 e47c22d3865870f2b3063bdfb7678932 253 Pfam PF00561 alpha/beta hydrolase fold 14 239 6.7E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS12660 e47c22d3865870f2b3063bdfb7678932 253 PANTHER PTHR10992 3 253 4.5E-124 T 22-04-2016 VCLMA_RS12660 e47c22d3865870f2b3063bdfb7678932 253 PANTHER PTHR10992:SF812 3 253 4.5E-124 T 22-04-2016 VCLMA_RS02305 604ad27d1ae3acbdfae9c7ceb3a16f39 200 PANTHER PTHR11067 1 196 1.2E-84 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VCLMA_RS02305 604ad27d1ae3acbdfae9c7ceb3a16f39 200 PANTHER PTHR11067:SF9 1 196 1.2E-84 T 22-04-2016 VCLMA_RS02305 604ad27d1ae3acbdfae9c7ceb3a16f39 200 Gene3D G3DSA:3.90.950.10 1 196 4.9E-84 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VCLMA_RS02305 604ad27d1ae3acbdfae9c7ceb3a16f39 200 Pfam PF01725 Ham1 family 4 192 6.4E-57 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VCLMA_RS02305 604ad27d1ae3acbdfae9c7ceb3a16f39 200 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 52.301 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VCLMA_RS02305 604ad27d1ae3acbdfae9c7ceb3a16f39 200 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 2.4E-64 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 VCLMA_RS02305 604ad27d1ae3acbdfae9c7ceb3a16f39 200 SUPERFAMILY SSF52972 1 195 2.07E-76 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VCLMA_RS08620 614fb4d163ef56c80b5ad89b35a0a35e 335 PANTHER PTHR30160:SF13 1 328 3.8E-107 T 22-04-2016 VCLMA_RS08620 614fb4d163ef56c80b5ad89b35a0a35e 335 Gene3D G3DSA:3.40.50.300 48 170 7.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08620 614fb4d163ef56c80b5ad89b35a0a35e 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 40.642 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VCLMA_RS08620 614fb4d163ef56c80b5ad89b35a0a35e 335 SUPERFAMILY SSF52540 52 183 6.49E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08620 614fb4d163ef56c80b5ad89b35a0a35e 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 324 1.5E-96 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VCLMA_RS08620 614fb4d163ef56c80b5ad89b35a0a35e 335 PANTHER PTHR30160 1 328 3.8E-107 T 22-04-2016 VCLMA_RS08620 614fb4d163ef56c80b5ad89b35a0a35e 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 321 4.0E-114 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 VCLMA_RS08430 6764a0dfe3509ecfc90ba1bbc1cbae54 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 2.0E-91 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 VCLMA_RS08430 6764a0dfe3509ecfc90ba1bbc1cbae54 227 PANTHER PTHR30625:SF3 3 223 4.2E-77 T 22-04-2016 VCLMA_RS08430 6764a0dfe3509ecfc90ba1bbc1cbae54 227 PANTHER PTHR30625 3 223 4.2E-77 T 22-04-2016 VCLMA_RS08430 6764a0dfe3509ecfc90ba1bbc1cbae54 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 3.5E-42 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VCLMA_RS09730 ba8f46076b3dfd85b399d48de986e1b9 175 Gene3D G3DSA:3.40.50.360 1 173 1.0E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS09730 ba8f46076b3dfd85b399d48de986e1b9 175 Pfam PF03358 NADPH-dependent FMN reductase 1 132 1.8E-23 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VCLMA_RS09730 ba8f46076b3dfd85b399d48de986e1b9 175 PANTHER PTHR30543:SF6 1 173 9.4E-45 T 22-04-2016 VCLMA_RS09730 ba8f46076b3dfd85b399d48de986e1b9 175 SUPERFAMILY SSF52218 1 173 9.43E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS09730 ba8f46076b3dfd85b399d48de986e1b9 175 PANTHER PTHR30543 1 173 9.4E-45 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF00679 Elongation factor G C-terminus 605 692 2.1E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF54980 407 485 3.24E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 7.7E-67 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 4.6E-35 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 SMART SM00889 485 603 1.2E-73 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 SMART SM00838 605 693 1.1E-58 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:3.40.50.300 6 293 2.8E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 110.609 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:3.30.70.870 411 485 6.3E-39 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PANTHER PTHR23115:SF66 308 697 0.0 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PANTHER PTHR23115 308 697 0.0 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF03764 Elongation factor G, domain IV 484 603 8.6E-48 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF14492 Elongation Factor G, domain II 409 483 6.0E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF52540 6 288 4.71E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Pfam PF03144 Elongation factor Tu domain 2 329 396 3.3E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:3.30.70.240 605 691 4.8E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF50447 271 409 2.83E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 101 112 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 85 95 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 137 146 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 9.4E-17 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF54211 484 604 1.8E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 SUPERFAMILY SSF54980 608 695 4.08E-30 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:2.40.30.10 310 410 2.2E-37 T 22-04-2016 VCLMA_RS01810 94e90f6a80e981c0a2408a2e80cd1d16 698 Gene3D G3DSA:3.30.230.10 489 604 6.7E-52 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS08185 84d694a83e4c050b73617d54fe889025 427 PANTHER PTHR33362 1 426 1.3E-235 T 22-04-2016 VCLMA_RS08185 84d694a83e4c050b73617d54fe889025 427 PIRSF PIRSF006066 1 425 8.3E-139 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VCLMA_RS08185 84d694a83e4c050b73617d54fe889025 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 419 4.7E-140 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VCLMA_RS08185 84d694a83e4c050b73617d54fe889025 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 414 7.5E-119 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VCLMA_RS08185 84d694a83e4c050b73617d54fe889025 427 PANTHER PTHR33362:SF3 1 426 1.3E-235 T 22-04-2016 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.78E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.78E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.78E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.78E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 4.7E-142 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 PANTHER PTHR11702 1 378 1.2E-179 T 22-04-2016 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 Pfam PF01926 50S ribosome-binding GTPase 162 284 1.1E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 Pfam PF01018 GTP1/OBG 3 156 4.3E-55 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 Gene3D G3DSA:2.70.210.12 2 156 5.3E-54 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 SUPERFAMILY SSF82051 2 157 2.62E-53 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 PIRSF PIRSF002401 1 375 3.4E-135 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 PANTHER PTHR11702:SF3 1 378 1.2E-179 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 SUPERFAMILY SSF52540 152 338 1.75E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.254 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VCLMA_RS02200 8e02381b20793fe9e94d7b5066b241b3 390 Gene3D G3DSA:3.40.50.300 160 343 9.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 Pfam PF00012 Hsp70 protein 12 336 3.2E-17 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PANTHER PTHR19375:SF176 81 336 1.7E-57 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 SUPERFAMILY SSF53067 217 367 1.74E-26 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 SUPERFAMILY SSF53067 414 473 1.74E-26 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PANTHER PTHR19375 81 336 1.7E-57 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PRINTS PR00301 70kDa heat shock protein signature 10 23 7.4E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PRINTS PR00301 70kDa heat shock protein signature 228 238 7.4E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PRINTS PR00301 70kDa heat shock protein signature 414 434 7.4E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PRINTS PR00301 70kDa heat shock protein signature 161 181 7.4E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 14 21 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 SUPERFAMILY SSF53067 9 204 4.12E-27 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PANTHER PTHR19375:SF176 46 65 1.7E-57 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PANTHER PTHR19375:SF176 9 26 1.7E-57 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PANTHER PTHR19375 46 65 1.7E-57 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 Gene3D G3DSA:3.30.420.40 139 228 1.9E-30 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 Gene3D G3DSA:3.30.420.40 10 100 1.9E-30 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 PANTHER PTHR19375 9 26 1.7E-57 T 22-04-2016 VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 222 235 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VCLMA_RS06490 1ff21989fe00b75604bddfc00d88b5ba 624 Gene3D G3DSA:3.30.420.40 229 321 4.5E-18 T 22-04-2016 VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.0E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 Gene3D G3DSA:3.40.50.300 198 461 3.5E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 PANTHER PTHR30153 8 468 2.1E-224 T 22-04-2016 VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 1.6E-115 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 SUPERFAMILY SSF48024 22 133 4.71E-37 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 SMART SM00382 220 426 0.0082 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 SUPERFAMILY SSF52540 201 272 2.56E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 SUPERFAMILY SSF52540 299 452 2.56E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 Gene3D G3DSA:1.10.860.10 24 126 5.0E-38 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VCLMA_RS01855 a8fd7fb29e3730a295af0f8482642c6b 468 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 2.6E-175 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VCLMA_RS11380 a9005bfdd24894197f56e1c21e203da6 126 Gene3D G3DSA:3.90.470.20 1 124 2.8E-43 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS11380 a9005bfdd24894197f56e1c21e203da6 126 SUPERFAMILY SSF56214 1 124 7.72E-32 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS11380 a9005bfdd24894197f56e1c21e203da6 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 120 6.8E-24 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS11380 a9005bfdd24894197f56e1c21e203da6 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 125 27.152 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS11380 a9005bfdd24894197f56e1c21e203da6 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 125 1.2E-45 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS11380 a9005bfdd24894197f56e1c21e203da6 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 125 1.5E-34 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS11380 a9005bfdd24894197f56e1c21e203da6 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 88 1.0E-39 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 PANTHER PTHR10804 282 592 1.3E-271 T 22-04-2016 VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 PANTHER PTHR10804 6 180 1.3E-271 T 22-04-2016 VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 PANTHER PTHR10804:SF105 282 592 1.3E-271 T 22-04-2016 VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 PANTHER PTHR10804:SF105 6 180 1.3E-271 T 22-04-2016 VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 Gene3D G3DSA:3.40.350.10 5 129 5.9E-17 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 Pfam PF16188 C-terminal region of peptidase_M24 534 594 1.2E-22 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 SUPERFAMILY SSF55920 303 559 6.8E-60 T 22-04-2016 IPR000994 Peptidase M24, structural domain VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 Pfam PF00557 Metallopeptidase family M24 309 525 2.3E-48 T 22-04-2016 IPR000994 Peptidase M24, structural domain VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 4.4E-33 T 22-04-2016 VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 Gene3D G3DSA:3.90.230.10 301 559 7.5E-64 T 22-04-2016 IPR000994 Peptidase M24, structural domain VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 138 2.8E-16 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 VCLMA_RS00350 17ec7c4e4efd29c4f3660a183b59a770 597 SUPERFAMILY SSF53092 7 130 2.09E-11 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal VCLMA_RS08405 8946fc5bccc0bb9a5b7258e4cd6ee131 254 PANTHER PTHR26312:SF74 148 254 6.1E-15 T 22-04-2016 VCLMA_RS08405 8946fc5bccc0bb9a5b7258e4cd6ee131 254 Pfam PF13174 Tetratricopeptide repeat 211 243 1.9E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS08405 8946fc5bccc0bb9a5b7258e4cd6ee131 254 Gene3D G3DSA:1.25.40.10 139 246 4.8E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS08405 8946fc5bccc0bb9a5b7258e4cd6ee131 254 PANTHER PTHR26312 148 254 6.1E-15 T 22-04-2016 VCLMA_RS08405 8946fc5bccc0bb9a5b7258e4cd6ee131 254 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 137 253 2.6E-35 T 22-04-2016 IPR014162 Tol-Pal system, YbgF VCLMA_RS08405 8946fc5bccc0bb9a5b7258e4cd6ee131 254 Pfam PF13432 Tetratricopeptide repeat 148 200 1.4E-7 T 22-04-2016 VCLMA_RS08405 8946fc5bccc0bb9a5b7258e4cd6ee131 254 SUPERFAMILY SSF48452 138 250 8.22E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS08405 8946fc5bccc0bb9a5b7258e4cd6ee131 254 Pfam PF16331 TolA binding protein trimerisation 42 112 5.1E-23 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 Pfam PF00072 Response regulator receiver domain 4 112 6.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 SMART SM00448 2 111 2.4E-43 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 Gene3D G3DSA:1.10.10.10 125 227 1.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 Gene3D G3DSA:3.40.50.2300 2 119 7.4E-39 T 22-04-2016 VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 SUPERFAMILY SSF46894 125 225 8.79E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.4E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 SMART SM00862 148 224 1.4E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 PANTHER PTHR26402 2 227 3.5E-79 T 22-04-2016 VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 PANTHER PTHR26402:SF292 2 227 3.5E-79 T 22-04-2016 VCLMA_RS12530 1e16c6d3189c1ee0908ba3bc80da5eb2 228 SUPERFAMILY SSF52172 1 119 1.85E-38 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 PANTHER PTHR23083 257 389 8.5E-124 T 22-04-2016 VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 PANTHER PTHR23083 1 219 8.5E-124 T 22-04-2016 VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 Gene3D G3DSA:1.25.40.10 313 389 2.9E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 Gene3D G3DSA:1.25.40.10 85 204 2.9E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 PANTHER PTHR23083:SF396 257 389 8.5E-124 T 22-04-2016 VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 PANTHER PTHR23083:SF396 1 219 8.5E-124 T 22-04-2016 VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 SUPERFAMILY SSF48452 85 207 1.85E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 Pfam PF07219 HemY protein N-terminus 26 132 4.2E-27 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 SUPERFAMILY SSF48452 314 389 2.62E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS00580 f57b1c4e098cf9afa5cea5ee796fbdd6 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 3.0E-133 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 VCLMA_RS07575 c44dc5a741d092d85933c711d82254cf 223 Pfam PF00005 ABC transporter 21 167 2.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS07575 c44dc5a741d092d85933c711d82254cf 223 Gene3D G3DSA:3.40.50.300 1 217 6.5E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07575 c44dc5a741d092d85933c711d82254cf 223 SMART SM00382 30 218 5.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS07575 c44dc5a741d092d85933c711d82254cf 223 SUPERFAMILY SSF52540 1 218 6.34E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07575 c44dc5a741d092d85933c711d82254cf 223 PANTHER PTHR24220 3 217 1.9E-110 T 22-04-2016 VCLMA_RS07575 c44dc5a741d092d85933c711d82254cf 223 PANTHER PTHR24220:SF430 3 217 1.9E-110 T 22-04-2016 VCLMA_RS07575 c44dc5a741d092d85933c711d82254cf 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 Pfam PF00875 DNA photolyase 7 163 5.6E-26 T 22-04-2016 IPR006050 DNA photolyase, N-terminal VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 SUPERFAMILY SSF48173 195 421 7.72E-70 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 SUPERFAMILY SSF52425 3 189 1.96E-36 T 22-04-2016 IPR006050 DNA photolyase, N-terminal VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 PANTHER PTHR11455 3 419 1.4E-125 T 22-04-2016 VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 Gene3D G3DSA:1.10.579.10 284 420 1.6E-54 T 22-04-2016 VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 Gene3D G3DSA:1.25.40.80 151 283 2.6E-40 T 22-04-2016 VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 Gene3D G3DSA:3.40.50.620 3 150 1.4E-30 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 PANTHER PTHR11455:SF22 3 419 1.4E-125 T 22-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 Pfam PF03441 FAD binding domain of DNA photolyase 276 420 4.1E-40 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 PRINTS PR00147 DNA photolyase signature 322 338 3.4E-12 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 PRINTS PR00147 DNA photolyase signature 342 360 3.4E-12 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 PRINTS PR00147 DNA photolyase signature 381 395 3.4E-12 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 VCLMA_RS08320 7c2d2538437dc148bb800be612872b95 462 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 4 421 2.8E-187 T 22-04-2016 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 VCLMA_RS00720 845812c091d805736b24e8b52d46584a 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VCLMA_RS00720 845812c091d805736b24e8b52d46584a 199 Gene3D G3DSA:3.40.50.150 11 198 2.7E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00720 845812c091d805736b24e8b52d46584a 199 PIRSF PIRSF004553 18 198 3.4E-53 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00720 845812c091d805736b24e8b52d46584a 199 PANTHER PTHR18895 2 199 6.3E-54 T 22-04-2016 VCLMA_RS00720 845812c091d805736b24e8b52d46584a 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 2.0E-62 T 22-04-2016 VCLMA_RS00720 845812c091d805736b24e8b52d46584a 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 15 196 5.6E-57 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS00720 845812c091d805736b24e8b52d46584a 199 PANTHER PTHR18895:SF60 2 199 6.3E-54 T 22-04-2016 VCLMA_RS00720 845812c091d805736b24e8b52d46584a 199 SUPERFAMILY SSF53335 18 195 5.3E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05755 9da3702455f7e383066d05a6147c4787 161 PANTHER PTHR13947 13 161 8.2E-33 T 22-04-2016 VCLMA_RS05755 9da3702455f7e383066d05a6147c4787 161 Gene3D G3DSA:3.40.630.30 1 161 6.4E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS05755 9da3702455f7e383066d05a6147c4787 161 Pfam PF00583 Acetyltransferase (GNAT) family 61 138 2.3E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS05755 9da3702455f7e383066d05a6147c4787 161 PANTHER PTHR13947:SF7 13 161 8.2E-33 T 22-04-2016 VCLMA_RS05755 9da3702455f7e383066d05a6147c4787 161 SUPERFAMILY SSF55729 1 160 9.79E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS08295 147711f03910c42fa574eb3dae985872 328 Pfam PF01926 50S ribosome-binding GTPase 41 164 1.3E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS08295 147711f03910c42fa574eb3dae985872 328 PANTHER PTHR10903 11 163 2.1E-67 T 22-04-2016 VCLMA_RS08295 147711f03910c42fa574eb3dae985872 328 Gene3D G3DSA:3.40.50.300 34 254 1.1E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08295 147711f03910c42fa574eb3dae985872 328 PANTHER PTHR10903:SF67 11 163 2.1E-67 T 22-04-2016 VCLMA_RS08295 147711f03910c42fa574eb3dae985872 328 SUPERFAMILY SSF52540 26 173 3.54E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 PANTHER PTHR32089:SF58 149 535 2.2E-236 T 22-04-2016 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 531 5.8E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 SUPERFAMILY SSF58104 224 537 1.96E-63 T 22-04-2016 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 Pfam PF00672 HAMP domain 184 251 6.9E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 PANTHER PTHR32089 149 535 2.2E-236 T 22-04-2016 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 Gene3D G3DSA:1.10.287.950 286 502 1.0E-48 T 22-04-2016 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 SMART SM00283 271 532 1.5E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 1.2E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 4 29 1.2E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 1.2E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06125 b2d9840b7405e75beaf98806a23a0dc4 543 SMART SM00304 203 256 1.3E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 7 588 5.0E-275 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 SUPERFAMILY SSF51905 6 259 7.02E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 SUPERFAMILY SSF51905 359 439 7.02E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 PIRSF PIRSF000171 1 580 1.5E-47 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 SUPERFAMILY SSF46977 451 588 2.75E-47 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 PANTHER PTHR11632:SF5 2 573 0.0 T 22-04-2016 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 PANTHER PTHR11632 2 573 0.0 T 22-04-2016 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 Pfam PF00890 FAD binding domain 9 405 1.6E-118 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 Gene3D G3DSA:4.10.80.40 556 588 1.2E-20 T 22-04-2016 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 Gene3D G3DSA:1.20.58.100 446 555 3.5E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 SUPERFAMILY SSF56425 236 356 2.99E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 Gene3D G3DSA:3.90.700.10 243 349 7.0E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.9E-37 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.1E-240 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 Gene3D G3DSA:3.50.50.60 6 242 1.1E-116 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09630 14221386155e6229b6ab85625536912b 588 Gene3D G3DSA:3.50.50.60 351 424 1.1E-116 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS12525 d5ed07c8033bc033b5100568f2767242 167 PIRSF PIRSF034445 1 155 2.9E-18 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 VCLMA_RS12525 d5ed07c8033bc033b5100568f2767242 167 PANTHER PTHR38102 2 167 6.6E-80 T 22-04-2016 VCLMA_RS12525 d5ed07c8033bc033b5100568f2767242 167 Pfam PF07813 LTXXQ motif family protein 40 145 6.0E-21 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 VCLMA_RS12525 d5ed07c8033bc033b5100568f2767242 167 PANTHER PTHR38102:SF1 2 167 6.6E-80 T 22-04-2016 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 Gene3D G3DSA:1.10.10.10 348 517 1.7E-63 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 SUPERFAMILY SSF47819 534 608 1.02E-25 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 SUPERFAMILY SSF52540 18 202 1.42E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 Gene3D G3DSA:3.40.50.300 210 347 7.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 Gene3D G3DSA:3.40.50.300 18 207 1.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 Pfam PF00270 DEAD/DEAH box helicase 33 188 1.3E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 PANTHER PTHR13710 1 610 7.5E-302 T 22-04-2016 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 PANTHER PTHR13710:SF81 1 610 7.5E-302 T 22-04-2016 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 SMART SM00490 253 334 2.2E-29 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 Pfam PF00570 HRDC domain 537 603 8.4E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 18 606 2.8E-258 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 Pfam PF09382 RQC domain 409 517 3.6E-38 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 466 3.6E-191 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 SMART SM00487 25 221 3.0E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 Pfam PF16124 RecQ zinc-binding 346 407 1.0E-17 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 SUPERFAMILY SSF52540 211 457 1.48E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 SMART SM00956 414 517 1.4E-50 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 Pfam PF00271 Helicase conserved C-terminal domain 230 334 1.3E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 SMART SM00341 533 609 8.2E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VCLMA_RS00940 0dd6f5cd08d5387e2557a433591630e1 611 Gene3D G3DSA:1.10.150.80 534 605 8.3E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VCLMA_RS03175 35f6f9803d5cb14a51f10f937751dc73 444 PANTHER PTHR11206 1 440 3.3E-136 T 22-04-2016 VCLMA_RS03175 35f6f9803d5cb14a51f10f937751dc73 444 TIGRFAM TIGR00797 matE: MATE efflux family protein 15 410 4.9E-48 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS03175 35f6f9803d5cb14a51f10f937751dc73 444 Pfam PF01554 MatE 246 398 2.1E-11 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS03175 35f6f9803d5cb14a51f10f937751dc73 444 Pfam PF01554 MatE 15 176 5.0E-22 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS03175 35f6f9803d5cb14a51f10f937751dc73 444 PIRSF PIRSF006603 1 442 4.9E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS03175 35f6f9803d5cb14a51f10f937751dc73 444 PANTHER PTHR11206:SF132 1 440 3.3E-136 T 22-04-2016 VCLMA_RS06275 ede7d6cff39b94bc6c38558b16bf9202 335 PANTHER PTHR32196 9 335 1.7E-223 T 22-04-2016 VCLMA_RS06275 ede7d6cff39b94bc6c38558b16bf9202 335 PANTHER PTHR32196:SF18 9 335 1.7E-223 T 22-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 VCLMA_RS06275 ede7d6cff39b94bc6c38558b16bf9202 335 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 324 2.4E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VCLMA_RS10340 cd045872431b01eeaadacc5c38bfb746 212 Gene3D G3DSA:3.40.50.170 2 195 2.2E-70 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS10340 cd045872431b01eeaadacc5c38bfb746 212 PANTHER PTHR10520 1 194 3.0E-107 T 22-04-2016 VCLMA_RS10340 cd045872431b01eeaadacc5c38bfb746 212 SUPERFAMILY SSF53328 4 198 4.97E-65 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS10340 cd045872431b01eeaadacc5c38bfb746 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.319 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VCLMA_RS10340 cd045872431b01eeaadacc5c38bfb746 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS10340 cd045872431b01eeaadacc5c38bfb746 212 Pfam PF00551 Formyl transferase 3 182 2.7E-64 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS10340 cd045872431b01eeaadacc5c38bfb746 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 192 1.0E-77 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 8.2E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 8.2E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 8.2E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 8.2E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 Gene3D G3DSA:3.40.50.1370 145 292 7.4E-56 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.521 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PANTHER PTHR11405 1 305 8.3E-146 T 22-04-2016 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 6.2E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 6.2E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 6.2E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 6.2E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 6.2E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 6.2E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 2.7E-41 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 Gene3D G3DSA:3.40.50.1370 7 144 2.0E-49 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 2.6E-33 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.4E-115 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 PANTHER PTHR11405:SF16 1 305 8.3E-146 T 22-04-2016 VCLMA_RS11675 57661a43742ad0d654302fc3b11a6741 309 SUPERFAMILY SSF53671 4 306 3.27E-101 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VCLMA_RS01255 dedad6b147e0cdc036eefd9674d45ed1 621 Gene3D G3DSA:3.90.25.10 469 554 9.6E-7 T 22-04-2016 VCLMA_RS01255 dedad6b147e0cdc036eefd9674d45ed1 621 PANTHER PTHR10366 283 562 8.4E-134 T 22-04-2016 VCLMA_RS01255 dedad6b147e0cdc036eefd9674d45ed1 621 Gene3D G3DSA:3.40.50.720 142 227 6.1E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01255 dedad6b147e0cdc036eefd9674d45ed1 621 SUPERFAMILY SSF53335 111 330 1.83E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS01255 dedad6b147e0cdc036eefd9674d45ed1 621 SUPERFAMILY SSF51735 282 557 1.77E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01255 dedad6b147e0cdc036eefd9674d45ed1 621 Gene3D G3DSA:3.40.50.720 283 468 1.5E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01255 dedad6b147e0cdc036eefd9674d45ed1 621 Pfam PF02719 Polysaccharide biosynthesis protein 284 578 3.4E-129 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VCLMA_RS01255 dedad6b147e0cdc036eefd9674d45ed1 621 PANTHER PTHR10366:SF256 283 562 8.4E-134 T 22-04-2016 VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 Gene3D G3DSA:1.10.1060.10 226 283 1.5E-6 T 22-04-2016 VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 SUPERFAMILY SSF54862 176 351 3.35E-31 T 22-04-2016 VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 SUPERFAMILY SSF54862 108 130 3.35E-31 T 22-04-2016 VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 44 472 5.1E-175 T 22-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 Pfam PF13746 4Fe-4S dicluster domain 223 327 1.1E-40 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 359 471 1.6E-28 T 22-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 PANTHER PTHR24960:SF45 4 396 5.9E-206 T 22-04-2016 VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 Gene3D G3DSA:3.30.70.20 284 316 1.1E-5 T 22-04-2016 VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 Gene3D G3DSA:2.60.40.10 357 472 3.5E-35 T 22-04-2016 IPR013783 Immunoglobulin-like fold VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 275 286 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 Pfam PF12801 4Fe-4S binding domain 98 137 4.3E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCLMA_RS00175 5bf5539ed35955214e89c41447caa822 474 PANTHER PTHR24960 4 396 5.9E-206 T 22-04-2016 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:2.60.260.20 258 335 1.4E-22 T 22-04-2016 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF49493 261 346 3.53E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:1.10.287.110 1 105 1.9E-36 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 42.597 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF57938 136 212 2.22E-22 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 PANTHER PTHR24078:SF231 1 352 5.5E-172 T 22-04-2016 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 Pfam PF01556 DnaJ C terminal domain 123 335 3.2E-45 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 SMART SM00271 4 62 8.0E-31 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 Pfam PF00684 DnaJ central domain 149 209 6.6E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 62 81 6.6E-32 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 42 62 6.6E-32 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 7 25 6.6E-32 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 PRINTS PR00625 DnaJ domain signature 25 40 6.6E-32 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 Pfam PF00226 DnaJ domain 5 67 3.8E-27 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:2.60.260.20 213 256 3.7E-21 T 22-04-2016 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:2.60.260.20 110 142 3.7E-21 T 22-04-2016 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.4E-139 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 Gene3D G3DSA:2.10.230.10 143 212 3.0E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF46565 1 110 1.7E-35 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 PANTHER PTHR24078 1 352 5.5E-172 T 22-04-2016 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF49493 116 140 9.68E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VCLMA_RS04010 4b359a6178d8a2acde0bde9ca3bf6297 381 SUPERFAMILY SSF49493 188 262 9.68E-20 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VCLMA_RS07070 ff8c0f728adacb20c06488ed3aafce9d 232 PANTHER PTHR30183 1 232 1.1E-120 T 22-04-2016 VCLMA_RS07070 ff8c0f728adacb20c06488ed3aafce9d 232 Gene3D G3DSA:1.10.3720.10 16 228 3.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07070 ff8c0f728adacb20c06488ed3aafce9d 232 PANTHER PTHR30183:SF4 1 232 1.1E-120 T 22-04-2016 VCLMA_RS07070 ff8c0f728adacb20c06488ed3aafce9d 232 SUPERFAMILY SSF161098 7 222 3.27E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07070 ff8c0f728adacb20c06488ed3aafce9d 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 221 6.3E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 32.198 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 SUPERFAMILY SSF46557 2 75 2.88E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 PIRSF PIRSF006092 1 157 8.0E-47 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 5.3E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 Gene3D G3DSA:1.10.287.180 1 74 2.3E-28 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 SUPERFAMILY SSF54534 81 156 8.37E-24 T 22-04-2016 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 PANTHER PTHR30437 1 156 6.7E-64 T 22-04-2016 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 8.0E-53 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 Gene3D G3DSA:3.10.50.30 78 156 1.5E-30 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 9.4E-27 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VCLMA_RS03085 63f12290ad8788ffe5c00e343c4f46d8 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VCLMA_RS08045 4c9b2be7db59f400f5de72de461562a0 484 Hamap MF_00484 Glycogen synthase [glgA]. 4 481 41.369 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VCLMA_RS08045 4c9b2be7db59f400f5de72de461562a0 484 PANTHER PTHR12526 4 479 4.2E-184 T 22-04-2016 VCLMA_RS08045 4c9b2be7db59f400f5de72de461562a0 484 SUPERFAMILY SSF53756 5 481 1.13E-116 T 22-04-2016 VCLMA_RS08045 4c9b2be7db59f400f5de72de461562a0 484 Pfam PF00534 Glycosyl transferases group 1 298 443 2.2E-14 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VCLMA_RS08045 4c9b2be7db59f400f5de72de461562a0 484 Gene3D G3DSA:3.40.50.2000 254 463 1.7E-65 T 22-04-2016 VCLMA_RS08045 4c9b2be7db59f400f5de72de461562a0 484 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 5 479 8.6E-157 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VCLMA_RS08045 4c9b2be7db59f400f5de72de461562a0 484 Pfam PF08323 Starch synthase catalytic domain 5 235 1.7E-68 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 VCLMA_RS08045 4c9b2be7db59f400f5de72de461562a0 484 PANTHER PTHR12526:SF397 4 479 4.2E-184 T 22-04-2016 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 Gene3D G3DSA:3.30.300.10 137 234 5.8E-45 T 22-04-2016 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 260 268 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 234 370 2.8E-69 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 382 59.32 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 Pfam PF02772 S-adenosylmethionine synthetase, central domain 115 232 8.9E-47 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 Gene3D G3DSA:3.30.300.10 12 136 5.5E-50 T 22-04-2016 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 SUPERFAMILY SSF55973 234 383 9.03E-71 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 5.3E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 380 1.3E-199 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 SUPERFAMILY SSF55973 112 233 4.32E-53 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 PANTHER PTHR11964 1 377 2.7E-284 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 117 127 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 SUPERFAMILY SSF55973 4 110 2.51E-47 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 PIRSF PIRSF000497 1 382 5.5E-176 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 VCLMA_RS02385 36f8f92c1531e46f54734988ba62a175 385 Gene3D G3DSA:3.30.300.10 245 382 2.8E-70 T 22-04-2016 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 TIGRFAM TIGR01027 proB: glutamate 5-kinase 12 374 4.7E-149 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 Gene3D G3DSA:3.40.1160.10 8 265 1.6E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 Hamap MF_00456 Glutamate 5-kinase [proB]. 12 265 36.202 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 SUPERFAMILY SSF53633 13 262 1.96E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 216 236 5.0E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 123 144 5.0E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 49 63 5.0E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 83 111 5.0E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 PRINTS PR00474 Glutamate 5-kinase family signature 155 182 5.0E-55 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 ProSitePatterns PS00902 Glutamate 5-kinase signature. 214 231 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 Pfam PF01472 PUA domain 284 358 6.2E-25 T 22-04-2016 IPR002478 PUA domain GO:0003723 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 PANTHER PTHR11063 10 377 2.9E-141 T 22-04-2016 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 SUPERFAMILY SSF88697 284 374 4.14E-25 T 22-04-2016 IPR015947 PUA-like domain VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 Gene3D G3DSA:2.30.130.10 282 373 3.9E-27 T 22-04-2016 IPR015947 PUA-like domain VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 Pfam PF00696 Amino acid kinase family 13 241 8.9E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 SMART SM00359 284 367 1.3E-19 T 22-04-2016 IPR002478 PUA domain GO:0003723 VCLMA_RS10560 00247cd85597fc9aa0c9036d1aa8e909 377 PIRSF PIRSF000729 7 376 1.0E-138 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 VCLMA_RS05410 3b97598206af9305fc2421af97302ae9 548 PANTHER PTHR11999:SF5 51 193 1.8E-164 T 22-04-2016 VCLMA_RS05410 3b97598206af9305fc2421af97302ae9 548 PANTHER PTHR11999:SF5 209 539 1.8E-164 T 22-04-2016 VCLMA_RS05410 3b97598206af9305fc2421af97302ae9 548 Gene3D G3DSA:3.90.1150.10 396 530 1.1E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS05410 3b97598206af9305fc2421af97302ae9 548 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 7 527 1.2E-289 T 22-04-2016 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VCLMA_RS05410 3b97598206af9305fc2421af97302ae9 548 Gene3D G3DSA:3.40.640.10 116 395 2.1E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS05410 3b97598206af9305fc2421af97302ae9 548 SUPERFAMILY SSF53383 26 530 1.31E-113 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS05410 3b97598206af9305fc2421af97302ae9 548 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 63 442 1.8E-53 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VCLMA_RS05410 3b97598206af9305fc2421af97302ae9 548 PANTHER PTHR11999 51 193 1.8E-164 T 22-04-2016 VCLMA_RS05410 3b97598206af9305fc2421af97302ae9 548 PANTHER PTHR11999 209 539 1.8E-164 T 22-04-2016 VCLMA_RS10010 d94724ffd202119ebc735a6748857bcf 283 PANTHER PTHR21057:SF6 1 283 6.1E-224 T 22-04-2016 VCLMA_RS10010 d94724ffd202119ebc735a6748857bcf 283 SUPERFAMILY SSF51569 3 279 8.61E-105 T 22-04-2016 VCLMA_RS10010 d94724ffd202119ebc735a6748857bcf 283 Pfam PF00793 DAHP synthetase I family 10 275 1.0E-69 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VCLMA_RS10010 d94724ffd202119ebc735a6748857bcf 283 PANTHER PTHR21057 1 283 6.1E-224 T 22-04-2016 VCLMA_RS10010 d94724ffd202119ebc735a6748857bcf 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 1.8E-116 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VCLMA_RS10010 d94724ffd202119ebc735a6748857bcf 283 Gene3D G3DSA:3.20.20.70 16 278 4.1E-107 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS10010 d94724ffd202119ebc735a6748857bcf 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.299 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 SUPERFAMILY SSF63380 2 100 1.78E-16 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 Gene3D G3DSA:3.40.50.80 103 234 1.7E-37 T 22-04-2016 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 Pfam PF00175 Oxidoreductase NAD-binding domain 111 214 7.9E-23 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 1.4E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 135 144 1.4E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 110 129 1.4E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 1.4E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 1.4E-13 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 PANTHER PTHR19370 2 236 5.4E-138 T 22-04-2016 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 PANTHER PTHR19370:SF119 2 236 5.4E-138 T 22-04-2016 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 Gene3D G3DSA:2.40.30.10 2 101 1.7E-24 T 22-04-2016 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 SUPERFAMILY SSF52343 103 234 8.38E-36 T 22-04-2016 VCLMA_RS01490 7602618048131931ea9af145750abd57 236 Pfam PF00970 Oxidoreductase FAD-binding domain 16 99 9.4E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 Gene3D G3DSA:1.10.10.10 7 77 2.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 SUPERFAMILY SSF48008 97 235 2.88E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.4E-25 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 PANTHER PTHR11751 93 115 7.2E-48 T 22-04-2016 VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 PANTHER PTHR11751 1 77 7.2E-48 T 22-04-2016 VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 SUPERFAMILY SSF46785 5 77 5.73E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 PANTHER PTHR11751:SF355 93 115 7.2E-48 T 22-04-2016 VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 PANTHER PTHR11751:SF355 1 77 7.2E-48 T 22-04-2016 VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 SMART SM00895 99 227 5.4E-20 T 22-04-2016 IPR011711 GntR, C-terminal VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 SMART SM00345 15 74 2.8E-27 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 Gene3D G3DSA:1.20.120.530 98 238 8.3E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS11180 039969d462b2b2122f96c7cfa93667e2 256 Pfam PF07729 FCD domain 99 226 4.3E-20 T 22-04-2016 IPR011711 GntR, C-terminal VCLMA_RS12160 c842e6c8540afea7e1e461988cedabd5 329 PANTHER PTHR10794:SF46 1 326 7.9E-85 T 22-04-2016 VCLMA_RS12160 c842e6c8540afea7e1e461988cedabd5 329 PANTHER PTHR10794 1 326 7.9E-85 T 22-04-2016 VCLMA_RS12160 c842e6c8540afea7e1e461988cedabd5 329 PIRSF PIRSF005211 2 329 4.4E-106 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- VCLMA_RS12160 c842e6c8540afea7e1e461988cedabd5 329 SUPERFAMILY SSF53474 21 299 4.63E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS12160 c842e6c8540afea7e1e461988cedabd5 329 Pfam PF00561 alpha/beta hydrolase fold 61 301 2.8E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS12160 c842e6c8540afea7e1e461988cedabd5 329 Gene3D G3DSA:3.40.50.1820 51 301 1.4E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS05725 915c4fabb5ee50557bbb254f7b6b5fc0 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.5E-18 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VCLMA_RS05725 915c4fabb5ee50557bbb254f7b6b5fc0 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VCLMA_RS05725 915c4fabb5ee50557bbb254f7b6b5fc0 185 PIRSF PIRSF000847 1 184 1.2E-44 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VCLMA_RS05725 915c4fabb5ee50557bbb254f7b6b5fc0 185 PANTHER PTHR14269 2 179 1.0E-96 T 22-04-2016 VCLMA_RS05725 915c4fabb5ee50557bbb254f7b6b5fc0 185 PANTHER PTHR14269:SF13 2 179 1.0E-96 T 22-04-2016 VCLMA_RS05725 915c4fabb5ee50557bbb254f7b6b5fc0 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 1.2E-54 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VCLMA_RS05020 e26fd904b724b8ad341b2ea9d8e96d32 113 PANTHER PTHR33154 5 96 4.4E-19 T 22-04-2016 VCLMA_RS05020 e26fd904b724b8ad341b2ea9d8e96d32 113 SMART SM00418 5 83 4.2E-23 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS05020 e26fd904b724b8ad341b2ea9d8e96d32 113 SUPERFAMILY SSF46785 5 86 1.14E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS05020 e26fd904b724b8ad341b2ea9d8e96d32 113 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 6.9E-11 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS05020 e26fd904b724b8ad341b2ea9d8e96d32 113 Gene3D G3DSA:1.10.10.10 5 88 2.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS05020 e26fd904b724b8ad341b2ea9d8e96d32 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 1.4E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS05020 e26fd904b724b8ad341b2ea9d8e96d32 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 1.4E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS05020 e26fd904b724b8ad341b2ea9d8e96d32 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 1.4E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS05020 e26fd904b724b8ad341b2ea9d8e96d32 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 1.4E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS02145 c0c3f8abed9da1bb48977771536785f7 265 PANTHER PTHR10066 3 254 5.0E-23 T 22-04-2016 VCLMA_RS02145 c0c3f8abed9da1bb48977771536785f7 265 Gene3D G3DSA:2.60.120.260 52 150 5.1E-6 T 22-04-2016 IPR008979 Galactose-binding domain-like VCLMA_RS02145 c0c3f8abed9da1bb48977771536785f7 265 SUPERFAMILY SSF49785 2 155 7.65E-20 T 22-04-2016 IPR008979 Galactose-binding domain-like VCLMA_RS12435 76dae62388f6f259007e474f23abf78d 460 TIGRFAM TIGR00797 matE: MATE efflux family protein 34 423 4.2E-59 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS12435 76dae62388f6f259007e474f23abf78d 460 PANTHER PTHR11206:SF142 1 460 1.0E-267 T 22-04-2016 VCLMA_RS12435 76dae62388f6f259007e474f23abf78d 460 Pfam PF01554 MatE 34 193 2.6E-26 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS12435 76dae62388f6f259007e474f23abf78d 460 Pfam PF01554 MatE 257 418 1.6E-19 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS12435 76dae62388f6f259007e474f23abf78d 460 PIRSF PIRSF006603 10 456 9.2E-126 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS12435 76dae62388f6f259007e474f23abf78d 460 PANTHER PTHR11206 1 460 1.0E-267 T 22-04-2016 VCLMA_RS11860 009d1828df058f5d78bfc5a37d99ffbc 212 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 2.2E-67 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VCLMA_RS11860 009d1828df058f5d78bfc5a37d99ffbc 212 PANTHER PTHR10173 1 199 9.8E-104 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VCLMA_RS11860 009d1828df058f5d78bfc5a37d99ffbc 212 Gene3D G3DSA:3.30.1060.10 4 197 5.3E-81 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VCLMA_RS11860 009d1828df058f5d78bfc5a37d99ffbc 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 197 2.5E-66 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VCLMA_RS11860 009d1828df058f5d78bfc5a37d99ffbc 212 SUPERFAMILY SSF55068 3 207 2.09E-81 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VCLMA_RS11860 009d1828df058f5d78bfc5a37d99ffbc 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 38.139 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 VCLMA_RS11860 009d1828df058f5d78bfc5a37d99ffbc 212 PANTHER PTHR10173:SF6 1 199 9.8E-104 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 1.1E-5 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 1.1E-5 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 Gene3D G3DSA:3.40.50.880 2 191 3.2E-67 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.3E-13 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.3E-13 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.3E-13 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PANTHER PTHR11922 1 193 1.5E-93 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.3E-54 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.6E-36 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.6E-36 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.6E-36 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.6E-36 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.6E-36 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.6E-36 T 22-04-2016 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 SUPERFAMILY SSF52317 1 192 1.59E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 3.9E-86 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS12200 57b2edbb1b60cea3c77f7060756c487c 193 PANTHER PTHR11922:SF7 1 193 1.5E-93 T 22-04-2016 VCLMA_RS06865 92c191ceb6edcd6aadfe412981b26f9b 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.849 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VCLMA_RS06865 92c191ceb6edcd6aadfe412981b26f9b 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 2.0E-72 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VCLMA_RS06865 92c191ceb6edcd6aadfe412981b26f9b 149 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 3.7E-69 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 Pfam PF01225 Mur ligase family, catalytic domain 27 105 9.6E-14 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 SUPERFAMILY SSF53623 111 337 1.7E-72 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 26 491 6.8E-182 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 Pfam PF08245 Mur ligase middle domain 117 318 2.1E-50 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 SUPERFAMILY SSF53244 340 491 8.39E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 Gene3D G3DSA:3.90.190.20 343 485 4.7E-54 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 341 424 2.3E-24 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 Gene3D G3DSA:3.40.1390.10 9 108 5.1E-29 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 PANTHER PTHR23135 14 492 6.6E-212 T 22-04-2016 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 PANTHER PTHR23135:SF4 14 492 6.6E-212 T 22-04-2016 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 Gene3D G3DSA:3.40.1190.10 113 342 2.9E-76 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 491 33.584 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 VCLMA_RS11145 f729ada338e17aa7af8667282267f531 495 SUPERFAMILY SSF63418 13 108 1.07E-22 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 Gene3D G3DSA:3.40.1500.10 6 305 5.2E-136 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 Pfam PF01218 Coproporphyrinogen III oxidase 10 305 4.3E-131 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 PIRSF PIRSF000166 2 305 3.8E-127 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 SUPERFAMILY SSF102886 7 305 3.92E-136 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 171 195 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 PRINTS PR00073 Coprogen oxidase signature 32 48 1.9E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 PRINTS PR00073 Coprogen oxidase signature 239 266 1.9E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 PRINTS PR00073 Coprogen oxidase signature 130 152 1.9E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 PRINTS PR00073 Coprogen oxidase signature 167 196 1.9E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 PRINTS PR00073 Coprogen oxidase signature 95 119 1.9E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 PRINTS PR00073 Coprogen oxidase signature 267 293 1.9E-70 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 PANTHER PTHR10755 7 305 2.0E-189 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS00265 1d80bf571a4ea698a875e0f7dacf0f10 305 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 4 282 56.578 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 Gene3D G3DSA:3.40.30.10 169 241 2.9E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 PANTHER PTHR10430:SF19 1 168 1.5E-109 T 22-04-2016 VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 PANTHER PTHR10430 1 168 1.5E-109 T 22-04-2016 VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 Pfam PF00462 Glutaredoxin 173 231 1.1E-18 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 SUPERFAMILY SSF52833 2 241 2.89E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 Gene3D G3DSA:3.40.30.10 2 163 4.5E-66 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 PRINTS PR00160 Glutaredoxin signature 228 241 2.7E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 PRINTS PR00160 Glutaredoxin signature 214 227 2.7E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 PRINTS PR00160 Glutaredoxin signature 173 191 2.7E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 241 1.3E-39 T 22-04-2016 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VCLMA_RS12290 585a7d1ebc8f80cb1fc9e21ce1c18b9a 243 Pfam PF08534 Redoxin 5 160 6.4E-33 T 22-04-2016 IPR013740 Redoxin GO:0016491 VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 PANTHER PTHR18964:SF128 61 286 1.8E-215 T 22-04-2016 VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 PANTHER PTHR18964:SF128 304 401 1.8E-215 T 22-04-2016 VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 Pfam PF00480 ROK family 86 390 1.0E-74 T 22-04-2016 IPR000600 ROK family VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 SUPERFAMILY SSF46785 11 75 5.65E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 Gene3D G3DSA:3.30.420.40 222 374 4.5E-48 T 22-04-2016 VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 PANTHER PTHR18964 61 286 1.8E-215 T 22-04-2016 VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 PANTHER PTHR18964 304 401 1.8E-215 T 22-04-2016 VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 Gene3D G3DSA:3.30.420.40 83 221 5.3E-35 T 22-04-2016 VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 SUPERFAMILY SSF53067 85 391 3.19E-55 T 22-04-2016 VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 22-04-2016 IPR000600 ROK family VCLMA_RS04640 4f9dacd0d19dab6e340511cb67511154 404 Gene3D G3DSA:1.10.10.10 11 78 4.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 SUPERFAMILY SSF54211 217 382 3.41E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 SUPERFAMILY SSF56719 388 619 6.02E-80 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 1.4E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 1.4E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 1.4E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 1.4E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 1.4E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 1.4E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 1.4E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 1.4E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 1.4E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 2.9E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 Gene3D G3DSA:3.30.565.10 15 213 1.4E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 Pfam PF01751 Toprim domain 413 522 2.7E-13 T 22-04-2016 IPR006171 Toprim domain VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 SMART SM00433 34 622 3.5E-214 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 7.4E-28 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 SMART SM00387 27 173 3.4E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 Gene3D G3DSA:3.40.50.670 398 609 2.0E-80 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 Gene3D G3DSA:3.30.230.10 216 390 2.0E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PANTHER PTHR10169:SF45 1 626 0.0 T 22-04-2016 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 SUPERFAMILY SSF55874 5 215 2.87E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PANTHER PTHR10169 1 626 0.0 T 22-04-2016 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 Pfam PF00204 DNA gyrase B 218 384 1.8E-42 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.841 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11255 2e90e2907f05595a07c1e1d0af1e1eb0 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 1.3E-127 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS10205 53cd75e211507ec800cf54ac5424a078 138 PANTHER PTHR30435 1 138 6.2E-65 T 22-04-2016 VCLMA_RS10205 53cd75e211507ec800cf54ac5424a078 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.3E-12 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCLMA_RS10205 53cd75e211507ec800cf54ac5424a078 138 Pfam PF00460 Flagella basal body rod protein 7 32 2.5E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VCLMA_RS10205 53cd75e211507ec800cf54ac5424a078 138 PANTHER PTHR30435:SF2 1 138 6.2E-65 T 22-04-2016 VCLMA_RS10205 53cd75e211507ec800cf54ac5424a078 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VCLMA_RS10205 53cd75e211507ec800cf54ac5424a078 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 7.3E-52 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 PANTHER PTHR10277 1 507 1.6E-252 T 22-04-2016 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 SMART SM00917 369 499 1.5E-28 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 4.7E-237 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 Pfam PF00682 HMGL-like 4 273 2.0E-101 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 PANTHER PTHR10277:SF9 1 507 1.6E-252 T 22-04-2016 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 SUPERFAMILY SSF110921 393 498 8.5E-21 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 SUPERFAMILY SSF51569 1 291 1.45E-100 T 22-04-2016 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 9.5E-31 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.328 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 VCLMA_RS11535 3e3fdb54913d96941112cbd8c3f8c48c 516 Gene3D G3DSA:3.20.20.70 1 347 2.7E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 SMART SM00437 284 563 1.7E-90 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 627 2.9E-238 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 SUPERFAMILY SSF56712 3 611 3.53E-184 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 Pfam PF01751 Toprim domain 4 135 3.4E-16 T 22-04-2016 IPR006171 Toprim domain VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 SMART SM00436 129 224 7.8E-32 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 PANTHER PTHR11390:SF21 1 508 1.0E-189 T 22-04-2016 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 PANTHER PTHR11390:SF21 526 611 1.0E-189 T 22-04-2016 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 SMART SM00493 2 125 5.7E-27 T 22-04-2016 IPR006171 Toprim domain VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 PANTHER PTHR11390 1 508 1.0E-189 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 PANTHER PTHR11390 526 611 1.0E-189 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 Gene3D G3DSA:3.40.50.140 3 155 1.9E-47 T 22-04-2016 IPR006171 Toprim domain VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 Pfam PF01131 DNA topoisomerase 159 598 3.3E-117 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 71.231 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 Gene3D G3DSA:2.70.20.10 219 256 3.8E-41 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 Gene3D G3DSA:2.70.20.10 374 493 3.8E-41 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 Gene3D G3DSA:1.10.460.10 495 611 1.3E-54 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VCLMA_RS09410 583f98b4c09f341cd3876a0dc5af8a07 647 Gene3D G3DSA:1.10.460.10 160 218 1.3E-54 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VCLMA_RS12030 bef206baad4ac70a20f61a523a57ab30 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.4E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal VCLMA_RS12030 bef206baad4ac70a20f61a523a57ab30 179 PANTHER PTHR11994 1 178 2.2E-101 T 22-04-2016 VCLMA_RS12030 bef206baad4ac70a20f61a523a57ab30 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12030 bef206baad4ac70a20f61a523a57ab30 179 Gene3D G3DSA:3.30.1440.10 2 179 7.6E-80 T 22-04-2016 IPR022803 Ribosomal protein L5 domain VCLMA_RS12030 bef206baad4ac70a20f61a523a57ab30 179 PIRSF PIRSF002161 1 179 3.0E-66 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12030 bef206baad4ac70a20f61a523a57ab30 179 Pfam PF00281 Ribosomal protein L5 24 80 1.0E-28 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal VCLMA_RS12030 bef206baad4ac70a20f61a523a57ab30 179 SUPERFAMILY SSF55282 4 179 8.95E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain VCLMA_RS12030 bef206baad4ac70a20f61a523a57ab30 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.152 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03050 a4e1198f969e50d27ab790fe42e40822 113 SUPERFAMILY SSF89360 7 99 3.92E-30 T 22-04-2016 IPR000361 FeS cluster biogenesis VCLMA_RS03050 a4e1198f969e50d27ab790fe42e40822 113 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 113 35.554 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 VCLMA_RS03050 a4e1198f969e50d27ab790fe42e40822 113 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 94 111 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VCLMA_RS03050 a4e1198f969e50d27ab790fe42e40822 113 PANTHER PTHR10072 8 113 2.4E-47 T 22-04-2016 VCLMA_RS03050 a4e1198f969e50d27ab790fe42e40822 113 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 108 1.0E-18 T 22-04-2016 IPR000361 FeS cluster biogenesis VCLMA_RS03050 a4e1198f969e50d27ab790fe42e40822 113 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 3.7E-37 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VCLMA_RS03050 a4e1198f969e50d27ab790fe42e40822 113 Gene3D G3DSA:2.60.300.12 5 99 4.0E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 Gene3D G3DSA:3.40.190.10 200 260 7.4E-11 T 22-04-2016 VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 SUPERFAMILY SSF53850 87 291 1.07E-29 T 22-04-2016 VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 Gene3D G3DSA:1.10.10.10 2 81 1.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 PANTHER PTHR30126 1 297 4.2E-186 T 22-04-2016 VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 Pfam PF03466 LysR substrate binding domain 86 290 1.7E-35 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 Gene3D G3DSA:3.40.190.10 82 199 1.7E-20 T 22-04-2016 VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 SUPERFAMILY SSF46785 2 87 3.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.7E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS00805 9db313e860de50df64c67391df1cac5e 298 PANTHER PTHR30126:SF14 1 297 4.2E-186 T 22-04-2016 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 Gene3D G3DSA:3.30.930.10 156 505 2.2E-120 T 22-04-2016 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 Gene3D G3DSA:2.40.50.140 19 153 1.4E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 2.0E-200 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 Pfam PF01336 OB-fold nucleic acid binding domain 73 144 2.4E-7 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 SUPERFAMILY SSF50249 16 154 8.08E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 6.6E-81 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 PANTHER PTHR22594:SF4 6 510 1.7E-265 T 22-04-2016 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 43.168 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 SUPERFAMILY SSF55681 161 507 2.21E-118 T 22-04-2016 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 PANTHER PTHR22594 6 510 1.7E-265 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 8.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 8.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 8.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 8.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VCLMA_RS03245 c53fcb49c777baf118f9aa2b9a2c40b0 510 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 8.1E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 SUPERFAMILY SSF53187 104 428 7.85E-99 T 22-04-2016 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 7.9E-35 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 7.9E-35 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 7.9E-35 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 7.9E-35 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 PANTHER PTHR11963 42 430 1.1E-257 T 22-04-2016 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 PIRSF PIRSF036388 1 430 8.4E-235 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 Pfam PF12404 Peptidase 5 80 1.9E-33 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 Gene3D G3DSA:3.40.630.10 96 429 2.4E-113 T 22-04-2016 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 3.4E-97 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 PANTHER PTHR11963:SF20 42 430 1.1E-257 T 22-04-2016 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 Hamap MF_00504 Peptidase B [pepB]. 3 428 64.267 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VCLMA_RS03665 b18fc86396c688e37aa18ab9dbbbe046 430 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VCLMA_RS05175 95630eb6f886808a18cfbdbcea6f8882 321 PANTHER PTHR35271 1 321 4.7E-76 T 22-04-2016 VCLMA_RS05175 95630eb6f886808a18cfbdbcea6f8882 321 SUPERFAMILY SSF53822 43 275 5.55E-19 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS05175 95630eb6f886808a18cfbdbcea6f8882 321 Pfam PF04392 ABC transporter substrate binding protein 29 320 6.8E-123 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein VCLMA_RS05175 95630eb6f886808a18cfbdbcea6f8882 321 Gene3D G3DSA:3.40.50.2300 26 155 1.6E-59 T 22-04-2016 VCLMA_RS05175 95630eb6f886808a18cfbdbcea6f8882 321 Gene3D G3DSA:3.40.50.2300 156 287 3.5E-47 T 22-04-2016 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 SUPERFAMILY SSF52242 744 895 7.72E-45 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Gene3D G3DSA:1.10.1240.10 653 737 7.6E-40 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 PANTHER PTHR21091 4 399 8.3E-170 T 22-04-2016 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Pfam PF02607 B12 binding domain 660 734 1.4E-26 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 8.8E-123 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Gene3D G3DSA:3.10.196.10 959 1225 1.1E-109 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 PANTHER PTHR21091:SF97 4 399 8.3E-170 T 22-04-2016 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 SUPERFAMILY SSF82282 8 400 2.88E-118 T 22-04-2016 IPR003726 Homocysteine-binding domain VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 SUPERFAMILY SSF51717 357 631 2.75E-87 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 SUPERFAMILY SSF56507 904 1225 2.88E-130 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Gene3D G3DSA:3.40.50.280 746 896 1.8E-64 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 PIRSF PIRSF000381 3 1197 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Gene3D G3DSA:3.20.20.20 365 637 7.5E-115 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 SMART SM01018 658 741 1.4E-45 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 SUPERFAMILY SSF47644 654 740 1.11E-29 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Pfam PF02574 Homocysteine S-methyltransferase 18 326 2.2E-92 T 22-04-2016 IPR003726 Homocysteine-binding domain VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Pfam PF02310 B12 binding domain 749 843 1.7E-18 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Pfam PF00809 Pterin binding enzyme 361 599 1.2E-59 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 Gene3D G3DSA:3.20.20.330 4 364 4.9E-127 T 22-04-2016 IPR003726 Homocysteine-binding domain VCLMA_RS01970 77c162a86bc00881c9bc09a88d987757 1226 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 VCLMA_RS04430 c1bd504640478517786af856511a2755 263 PANTHER PTHR34183 4 239 7.8E-108 T 22-04-2016 VCLMA_RS04430 c1bd504640478517786af856511a2755 263 Pfam PF05036 Sporulation related domain 188 256 1.2E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VCLMA_RS04430 c1bd504640478517786af856511a2755 263 Gene3D G3DSA:2.40.40.10 116 168 1.7E-6 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VCLMA_RS04430 c1bd504640478517786af856511a2755 263 Pfam PF03330 Lytic transglycolase 77 166 9.9E-29 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VCLMA_RS04430 c1bd504640478517786af856511a2755 263 Gene3D G3DSA:3.30.70.1070 182 256 1.3E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VCLMA_RS04430 c1bd504640478517786af856511a2755 263 SUPERFAMILY SSF50685 78 167 1.99E-11 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VCLMA_RS04430 c1bd504640478517786af856511a2755 263 SUPERFAMILY SSF110997 187 256 7.59E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VCLMA_RS04430 c1bd504640478517786af856511a2755 263 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 79 173 3.1E-46 T 22-04-2016 IPR012997 Rare lipoprotein A VCLMA_RS04430 c1bd504640478517786af856511a2755 263 PANTHER PTHR34183:SF1 4 239 7.8E-108 T 22-04-2016 VCLMA_RS08900 29a397fd356005d191b77a600e825449 223 SUPERFAMILY SSF69593 8 208 1.57E-27 T 22-04-2016 VCLMA_RS08900 29a397fd356005d191b77a600e825449 223 Pfam PF01553 Acyltransferase 27 157 2.3E-19 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS08900 29a397fd356005d191b77a600e825449 223 Gene3D G3DSA:3.40.1130.10 29 213 1.9E-16 T 22-04-2016 VCLMA_RS08900 29a397fd356005d191b77a600e825449 223 PANTHER PTHR10434:SF21 1 222 1.2E-51 T 22-04-2016 VCLMA_RS08900 29a397fd356005d191b77a600e825449 223 SMART SM00563 38 160 5.8E-29 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS08900 29a397fd356005d191b77a600e825449 223 PANTHER PTHR10434 1 222 1.2E-51 T 22-04-2016 VCLMA_RS09480 1e281d8149a03c94e538d08905173d9a 207 Pfam PF00005 ABC transporter 18 158 5.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS09480 1e281d8149a03c94e538d08905173d9a 207 PANTHER PTHR24220:SF508 3 189 4.5E-103 T 22-04-2016 VCLMA_RS09480 1e281d8149a03c94e538d08905173d9a 207 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS09480 1e281d8149a03c94e538d08905173d9a 207 PANTHER PTHR24220 3 189 4.5E-103 T 22-04-2016 VCLMA_RS09480 1e281d8149a03c94e538d08905173d9a 207 Gene3D G3DSA:3.40.50.300 1 192 4.8E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09480 1e281d8149a03c94e538d08905173d9a 207 SUPERFAMILY SSF52540 2 194 6.05E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09480 1e281d8149a03c94e538d08905173d9a 207 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 203 3.2E-79 T 22-04-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 VCLMA_RS09480 1e281d8149a03c94e538d08905173d9a 207 SMART SM00382 26 207 1.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS02315 34aaa860d9048fee272e0a3e3996dfac 96 PANTHER PTHR13420 11 96 1.4E-25 T 22-04-2016 VCLMA_RS02315 34aaa860d9048fee272e0a3e3996dfac 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 91 1.1E-25 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 VCLMA_RS02315 34aaa860d9048fee272e0a3e3996dfac 96 SUPERFAMILY SSF69786 4 95 1.03E-31 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VCLMA_RS02315 34aaa860d9048fee272e0a3e3996dfac 96 Gene3D G3DSA:3.30.1200.10 5 91 7.8E-30 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VCLMA_RS02315 34aaa860d9048fee272e0a3e3996dfac 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 81 3.0E-24 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VCLMA_RS02315 34aaa860d9048fee272e0a3e3996dfac 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 95 19.75 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VCLMA_RS02315 34aaa860d9048fee272e0a3e3996dfac 96 SMART SM01152 7 83 5.8E-37 T 22-04-2016 IPR003746 Protein of unknown function DUF167 VCLMA_RS07840 8019c26f8f9a0db00751e437cf9709d6 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 294 8.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07840 8019c26f8f9a0db00751e437cf9709d6 295 SUPERFAMILY SSF161098 89 276 1.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07840 8019c26f8f9a0db00751e437cf9709d6 295 PANTHER PTHR30465:SF49 7 295 3.6E-178 T 22-04-2016 VCLMA_RS07840 8019c26f8f9a0db00751e437cf9709d6 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 1.9E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCLMA_RS07840 8019c26f8f9a0db00751e437cf9709d6 295 Gene3D G3DSA:1.10.3720.10 87 290 4.8E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07840 8019c26f8f9a0db00751e437cf9709d6 295 PANTHER PTHR30465 7 295 3.6E-178 T 22-04-2016 VCLMA_RS03485 9457eff6a9b596c4063fb6cbea4a79a2 240 Pfam PF00881 Nitroreductase family 8 159 1.3E-19 T 22-04-2016 IPR029479 Nitroreductase VCLMA_RS03485 9457eff6a9b596c4063fb6cbea4a79a2 240 PANTHER PTHR23026:SF98 1 185 6.5E-75 T 22-04-2016 VCLMA_RS03485 9457eff6a9b596c4063fb6cbea4a79a2 240 PANTHER PTHR23026 1 185 6.5E-75 T 22-04-2016 VCLMA_RS03485 9457eff6a9b596c4063fb6cbea4a79a2 240 SUPERFAMILY SSF55469 1 239 2.22E-71 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 VCLMA_RS03485 9457eff6a9b596c4063fb6cbea4a79a2 240 Gene3D G3DSA:3.40.109.10 1 239 2.7E-73 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 VCLMA_RS03485 9457eff6a9b596c4063fb6cbea4a79a2 240 PIRSF PIRSF005426 1 240 1.7E-79 T 22-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 VCLMA_RS12520 be95d613ccbf7f2bfb8c1ad88eb6d846 301 Gene3D G3DSA:1.20.1510.10 11 206 4.4E-42 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain VCLMA_RS12520 be95d613ccbf7f2bfb8c1ad88eb6d846 301 SUPERFAMILY SSF160240 210 287 1.12E-23 T 22-04-2016 VCLMA_RS12520 be95d613ccbf7f2bfb8c1ad88eb6d846 301 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 2.9E-68 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VCLMA_RS12520 be95d613ccbf7f2bfb8c1ad88eb6d846 301 PANTHER PTHR11562 1 296 1.8E-114 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VCLMA_RS12520 be95d613ccbf7f2bfb8c1ad88eb6d846 301 Gene3D G3DSA:3.30.70.1350 207 287 8.2E-30 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VCLMA_RS12520 be95d613ccbf7f2bfb8c1ad88eb6d846 301 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 286 2.5E-26 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain VCLMA_RS12520 be95d613ccbf7f2bfb8c1ad88eb6d846 301 SUPERFAMILY SSF161111 8 207 3.53E-50 T 22-04-2016 VCLMA_RS12520 be95d613ccbf7f2bfb8c1ad88eb6d846 301 Pfam PF01545 Cation efflux family 15 206 1.8E-41 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VCLMA_RS12520 be95d613ccbf7f2bfb8c1ad88eb6d846 301 PANTHER PTHR11562:SF55 1 296 1.8E-114 T 22-04-2016 VCLMA_RS12545 83dcaecaeebfc97440e0989d1de2c4a8 158 PANTHER PTHR12029:SF31 1 158 6.6E-74 T 22-04-2016 VCLMA_RS12545 83dcaecaeebfc97440e0989d1de2c4a8 158 SUPERFAMILY SSF75217 2 156 6.15E-44 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VCLMA_RS12545 83dcaecaeebfc97440e0989d1de2c4a8 158 Pfam PF00588 SpoU rRNA Methylase family 3 145 5.8E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VCLMA_RS12545 83dcaecaeebfc97440e0989d1de2c4a8 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 155 32.924 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VCLMA_RS12545 83dcaecaeebfc97440e0989d1de2c4a8 158 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 156 8.5E-58 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VCLMA_RS12545 83dcaecaeebfc97440e0989d1de2c4a8 158 Gene3D G3DSA:3.40.1280.10 1 157 2.8E-65 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCLMA_RS12545 83dcaecaeebfc97440e0989d1de2c4a8 158 PANTHER PTHR12029 1 158 6.6E-74 T 22-04-2016 VCLMA_RS12545 83dcaecaeebfc97440e0989d1de2c4a8 158 PIRSF PIRSF029256 1 158 1.6E-66 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VCLMA_RS09535 9f6d6020fea3e077073552b5d028466b 495 SMART SM00962 282 475 3.0E-64 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS09535 9f6d6020fea3e077073552b5d028466b 495 Gene3D G3DSA:3.40.50.300 281 472 1.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09535 9f6d6020fea3e077073552b5d028466b 495 PANTHER PTHR11564:SF3 190 472 5.8E-95 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VCLMA_RS09535 9f6d6020fea3e077073552b5d028466b 495 Pfam PF00448 SRP54-type protein, GTPase domain 284 472 1.8E-38 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS09535 9f6d6020fea3e077073552b5d028466b 495 SUPERFAMILY SSF52540 279 470 8.24E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09535 9f6d6020fea3e077073552b5d028466b 495 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 370 8.9E-87 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VCLMA_RS09535 9f6d6020fea3e077073552b5d028466b 495 SMART SM00382 281 419 6.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS09535 9f6d6020fea3e077073552b5d028466b 495 PANTHER PTHR11564 190 472 5.8E-95 T 22-04-2016 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 SMART SM00387 466 581 6.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 PANTHER PTHR24423 36 75 1.4E-133 T 22-04-2016 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 PANTHER PTHR24423 333 727 1.4E-133 T 22-04-2016 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 Gene3D G3DSA:3.30.565.10 406 580 4.6E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 Gene3D G3DSA:3.30.450.20 123 199 4.5E-9 T 22-04-2016 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 419 2.0E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 SUPERFAMILY SSF52172 598 726 2.42E-31 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 SUPERFAMILY SSF47384 342 420 1.79E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 SMART SM00448 600 714 1.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 524 534 3.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 3.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 3.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 3.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 Pfam PF00072 Response regulator receiver domain 602 714 1.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 SMART SM00388 354 419 4.3E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 Gene3D G3DSA:3.40.50.2300 598 720 3.0E-34 T 22-04-2016 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 Gene3D G3DSA:1.10.287.130 348 405 3.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 PANTHER PTHR24423:SF486 36 75 1.4E-133 T 22-04-2016 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 PANTHER PTHR24423:SF486 333 727 1.4E-133 T 22-04-2016 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 466 580 2.8E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 Pfam PF02743 Cache domain 43 237 1.6E-13 T 22-04-2016 IPR033479 Double Cache domain 1 VCLMA_RS08390 4c3f316544bb96be251d82ad9c7971ee 734 SUPERFAMILY SSF55874 408 583 2.1E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.397 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 Gene3D G3DSA:3.40.50.620 11 227 3.1E-83 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 PANTHER PTHR11766:SF1 4 395 7.5E-239 T 22-04-2016 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 PANTHER PTHR11766 4 395 7.5E-239 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 Gene3D G3DSA:3.10.290.10 327 393 4.8E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 1.5E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 1.5E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.5E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 1.5E-25 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 SMART SM00363 334 395 3.6E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 3.4E-129 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 SUPERFAMILY SSF55174 320 394 1.44E-15 T 22-04-2016 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 Gene3D G3DSA:1.10.240.10 228 326 1.9E-37 T 22-04-2016 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 Pfam PF01479 S4 domain 338 372 3.5E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 317 8.4E-80 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS03070 6e19c4efcd93427e9a24cc6264b83b8f 395 SUPERFAMILY SSF52374 6 315 2.69E-97 T 22-04-2016 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 PANTHER PTHR11138 5 307 2.6E-116 T 22-04-2016 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 SUPERFAMILY SSF53328 5 210 1.01E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 SUPERFAMILY SSF50486 208 310 3.61E-32 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 Pfam PF00551 Formyl transferase 6 183 8.4E-48 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 315 36.913 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 1.5E-28 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 Gene3D G3DSA:3.40.50.170 4 208 8.1E-75 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 1.8E-108 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS00220 5a2c40d27a23377411fe2746c334acd7 315 Gene3D G3DSA:3.10.25.10 210 307 1.3E-34 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 Gene3D G3DSA:3.40.50.720 2 192 1.5E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 357 55.513 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 347 4.5E-159 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 SUPERFAMILY SSF51735 4 353 6.93E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 PANTHER PTHR10366 5 283 4.9E-213 T 22-04-2016 VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 PANTHER PTHR10366 311 353 4.9E-213 T 22-04-2016 VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 Gene3D G3DSA:3.90.25.10 305 364 2.6E-50 T 22-04-2016 VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 Gene3D G3DSA:3.90.25.10 194 248 2.6E-50 T 22-04-2016 VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 PANTHER PTHR10366:SF429 5 283 4.9E-213 T 22-04-2016 VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 PANTHER PTHR10366:SF429 311 353 4.9E-213 T 22-04-2016 VCLMA_RS01170 27670249603aa91bd6c61e596a245928 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 4 354 9.4E-177 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 VCLMA_RS12455 c70c0dba33677f0be2423c21c936079c 185 PANTHER PTHR32194 2 181 6.4E-128 T 22-04-2016 VCLMA_RS12455 c70c0dba33677f0be2423c21c936079c 185 PIRSF PIRSF039093 1 175 2.1E-86 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VCLMA_RS12455 c70c0dba33677f0be2423c21c936079c 185 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.719 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VCLMA_RS12455 c70c0dba33677f0be2423c21c936079c 185 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 3.1E-86 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VCLMA_RS12455 c70c0dba33677f0be2423c21c936079c 185 SUPERFAMILY SSF56235 2 172 1.14E-56 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS12455 c70c0dba33677f0be2423c21c936079c 185 Gene3D G3DSA:3.60.20.10 2 173 2.3E-85 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS12455 c70c0dba33677f0be2423c21c936079c 185 Pfam PF00227 Proteasome subunit 2 169 9.7E-23 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 VCLMA_RS11775 0d24036f76d2b2eaa04711bdadd7ecf7 148 PANTHER PTHR30505:SF6 1 147 6.6E-77 T 22-04-2016 VCLMA_RS11775 0d24036f76d2b2eaa04711bdadd7ecf7 148 Gene3D G3DSA:3.40.930.10 1 147 2.7E-44 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS11775 0d24036f76d2b2eaa04711bdadd7ecf7 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS11775 0d24036f76d2b2eaa04711bdadd7ecf7 148 PANTHER PTHR30505 1 147 6.6E-77 T 22-04-2016 VCLMA_RS11775 0d24036f76d2b2eaa04711bdadd7ecf7 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 145 9.4E-37 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS11775 0d24036f76d2b2eaa04711bdadd7ecf7 148 SUPERFAMILY SSF55804 1 146 8.89E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VCLMA_RS11775 0d24036f76d2b2eaa04711bdadd7ecf7 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 146 5.2E-52 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS14300 0ee07a8c0283be580227dec2f8745836 129 PANTHER PTHR23522 1 129 3.8E-45 T 22-04-2016 VCLMA_RS14300 0ee07a8c0283be580227dec2f8745836 129 SUPERFAMILY SSF103473 3 127 2.49E-12 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS14300 0ee07a8c0283be580227dec2f8745836 129 PANTHER PTHR23522:SF3 1 129 3.8E-45 T 22-04-2016 VCLMA_RS14300 0ee07a8c0283be580227dec2f8745836 129 Pfam PF12832 MFS_1 like family 3 127 6.0E-13 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain VCLMA_RS14300 0ee07a8c0283be580227dec2f8745836 129 Gene3D G3DSA:1.20.1250.20 2 84 2.2E-5 T 22-04-2016 VCLMA_RS08865 8b439cb565af59a26dc30dfd3eef69f0 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 4.3E-103 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VCLMA_RS08865 8b439cb565af59a26dc30dfd3eef69f0 332 PIRSF PIRSF006470 1 332 9.1E-120 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VCLMA_RS08865 8b439cb565af59a26dc30dfd3eef69f0 332 PANTHER PTHR33376:SF7 1 332 4.1E-169 T 22-04-2016 VCLMA_RS08865 8b439cb565af59a26dc30dfd3eef69f0 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 277 8.4E-76 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VCLMA_RS08865 8b439cb565af59a26dc30dfd3eef69f0 332 PANTHER PTHR33376 1 332 4.1E-169 T 22-04-2016 VCLMA_RS06260 8c137a6d5c30e298e1976d8721ed3ed3 324 Gene3D G3DSA:3.40.50.2300 24 166 7.9E-36 T 22-04-2016 VCLMA_RS06260 8c137a6d5c30e298e1976d8721ed3ed3 324 Gene3D G3DSA:3.40.50.2300 167 312 8.0E-41 T 22-04-2016 VCLMA_RS06260 8c137a6d5c30e298e1976d8721ed3ed3 324 SUPERFAMILY SSF53822 23 323 8.16E-77 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS06260 8c137a6d5c30e298e1976d8721ed3ed3 324 PANTHER PTHR30036:SF2 1 324 2.4E-144 T 22-04-2016 VCLMA_RS06260 8c137a6d5c30e298e1976d8721ed3ed3 324 Pfam PF13407 Periplasmic binding protein domain 26 296 9.2E-59 T 22-04-2016 IPR025997 Periplasmic binding protein VCLMA_RS06260 8c137a6d5c30e298e1976d8721ed3ed3 324 PANTHER PTHR30036 1 324 2.4E-144 T 22-04-2016 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 Gene3D G3DSA:3.40.50.300 139 313 3.8E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 465 3.5E-249 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 Pfam PF00158 Sigma-54 interaction domain 141 308 3.5E-71 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 PANTHER PTHR32071:SF15 6 465 3.1E-247 T 22-04-2016 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 PANTHER PTHR32071 6 465 3.1E-247 T 22-04-2016 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 SMART SM00448 4 115 3.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 Pfam PF00072 Response regulator receiver domain 6 115 2.1E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 SUPERFAMILY SSF52172 2 186 6.97E-43 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 SUPERFAMILY SSF46689 381 465 3.23E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 SUPERFAMILY SSF52540 140 384 8.75E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 448 466 1.8E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 448 1.8E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 Gene3D G3DSA:1.10.8.60 314 391 1.5E-21 T 22-04-2016 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 Gene3D G3DSA:3.40.50.2300 6 130 3.9E-35 T 22-04-2016 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 Pfam PF02954 Bacterial regulatory protein, Fis family 425 465 1.1E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 Gene3D G3DSA:1.10.10.60 400 465 2.7E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 SMART SM00382 161 312 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS12810 c0454d60d84c185cd5430a540fc9c5f0 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 SUPERFAMILY SSF46894 135 210 2.31E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 SMART SM00421 146 203 1.8E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 Pfam PF00072 Response regulator receiver domain 4 116 4.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 PANTHER PTHR26402:SF506 2 214 1.6E-110 T 22-04-2016 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 Gene3D G3DSA:1.10.10.10 121 211 2.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 SMART SM00448 2 115 1.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 PANTHER PTHR26402 2 214 1.6E-110 T 22-04-2016 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 SUPERFAMILY SSF52172 3 132 8.25E-34 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 Gene3D G3DSA:3.40.50.2300 2 120 2.5E-34 T 22-04-2016 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.5E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.5E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.5E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS05715 925b47a45a61d1447a64ce3dc3bb9146 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 1.0E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:1.10.287.130 626 682 9.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SUPERFAMILY SSF55785 508 610 1.86E-6 T 22-04-2016 IPR000014 PAS domain VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SUPERFAMILY SSF53850 226 436 3.4E-16 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 769 783 2.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 804 822 2.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 828 841 2.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PRINTS PR00344 Bacterial sensor protein C-terminal signature 787 797 2.9E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:3.40.50.2300 919 1026 6.5E-31 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SUPERFAMILY SSF55874 675 844 1.31E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:3.40.190.10 68 152 2.0E-4 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:3.30.450.20 492 568 1.2E-4 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SMART SM00448 918 1033 6.7E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SMART SM00073 1054 1140 0.0076 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Pfam PF00072 Response regulator receiver domain 920 1033 2.6E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SMART SM00388 621 686 1.8E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:3.30.450.20 573 625 2.4E-7 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SUPERFAMILY SSF52172 919 1050 6.97E-30 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:3.30.565.10 696 842 6.7E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SUPERFAMILY SSF53850 8 193 3.84E-27 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SUPERFAMILY SSF47384 606 687 1.61E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:3.40.190.10 401 437 1.3E-10 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:3.40.190.10 9 67 4.9E-14 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:3.40.190.10 167 193 4.9E-14 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:3.40.190.10 225 311 1.3E-10 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SMART SM00062 6 210 4.9E-10 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PANTHER PTHR24423:SF482 316 363 0.0 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PANTHER PTHR24423:SF482 493 1075 0.0 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PANTHER PTHR24423:SF482 237 298 0.0 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Pfam PF00512 His Kinase A (phospho-acceptor) domain 622 685 7.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SUPERFAMILY SSF47226 1049 1143 3.4E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SMART SM00387 733 844 2.2E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 8 194 1.1E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 229 434 1.2E-9 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Pfam PF01627 Hpt domain 1049 1139 8.1E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PANTHER PTHR24423 316 363 0.0 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PANTHER PTHR24423 493 1075 0.0 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 PANTHER PTHR24423 237 298 0.0 T 22-04-2016 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Gene3D G3DSA:1.20.120.160 1027 1144 8.6E-14 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 734 842 9.9E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07690 b675153d4cfddd10c7407f0205b9bbc7 1146 SMART SM00918 236 281 3.2E-4 T 22-04-2016 IPR019594 Ionotropic glutamate receptor, L-glutamate and glycine-binding domain GO:0004970|GO:0005234|GO:0016020 VCLMA_RS10265 a181098a25402268bb326a9f76182686 687 SUPERFAMILY SSF56935 44 687 1.83E-90 T 22-04-2016 VCLMA_RS10265 a181098a25402268bb326a9f76182686 687 PANTHER PTHR32552 1 687 0.0 T 22-04-2016 VCLMA_RS10265 a181098a25402268bb326a9f76182686 687 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 178 6.2E-12 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VCLMA_RS10265 a181098a25402268bb326a9f76182686 687 PANTHER PTHR32552:SF24 1 687 0.0 T 22-04-2016 IPR030150 TonB-dependent siderophore receptor ViuA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 VCLMA_RS10265 a181098a25402268bb326a9f76182686 687 Pfam PF00593 TonB dependent receptor 445 685 1.3E-16 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VCLMA_RS10265 a181098a25402268bb326a9f76182686 687 Gene3D G3DSA:2.40.170.20 188 687 1.0E-52 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VCLMA_RS10265 a181098a25402268bb326a9f76182686 687 Gene3D G3DSA:2.170.130.10 43 187 4.1E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VCLMA_RS10265 a181098a25402268bb326a9f76182686 687 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 65 687 5.6E-112 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 Gene3D G3DSA:3.40.50.300 19 234 2.5E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 2.7E-195 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 PANTHER PTHR23115 10 359 2.0E-79 T 22-04-2016 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 SUPERFAMILY SSF52540 22 235 2.56E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 SUPERFAMILY SSF50447 241 324 4.57E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 PRINTS PR00315 GTP-binding elongation factor signature 109 119 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 PRINTS PR00315 GTP-binding elongation factor signature 28 41 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 PRINTS PR00315 GTP-binding elongation factor signature 89 97 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 PRINTS PR00315 GTP-binding elongation factor signature 125 136 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 PRINTS PR00315 GTP-binding elongation factor signature 162 171 5.9E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 213 4.2E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 Pfam PF00009 Elongation factor Tu GTP binding domain 26 226 1.4E-44 T 22-04-2016 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 Gene3D G3DSA:2.40.30.10 242 357 4.3E-20 T 22-04-2016 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 PANTHER PTHR23115:SF91 10 359 2.0E-79 T 22-04-2016 VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 SUPERFAMILY SSF50465 333 434 2.4E-27 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site VCLMA_RS11905 e0d9a96757e8aeec96f8fbf1fb38f31f 476 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 54.001 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 Gene3D G3DSA:3.40.50.300 451 602 7.1E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 SMART SM00491 477 606 2.1E-47 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 Pfam PF00270 DEAD/DEAH box helicase 30 82 4.3E-5 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 Pfam PF06733 DEAD_2 176 249 2.2E-4 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 SUPERFAMILY SSF52540 189 231 3.7E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 SUPERFAMILY SSF52540 576 598 3.7E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 SUPERFAMILY SSF52540 16 109 3.51E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 SUPERFAMILY SSF52540 188 245 3.51E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 Pfam PF13307 Helicase C-terminal domain 462 619 3.2E-35 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 SMART SM00487 17 302 0.003 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 SUPERFAMILY SSF52540 565 602 3.51E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 PANTHER PTHR11472:SF37 18 624 1.5E-229 T 22-04-2016 VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 Gene3D G3DSA:3.40.50.300 29 117 1.3E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 Gene3D G3DSA:3.40.50.300 193 237 1.3E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 PANTHER PTHR11472 18 624 1.5E-229 T 22-04-2016 VCLMA_RS09145 da948f5c6b6ab63ad0830268b5ea0a73 646 SUPERFAMILY SSF52540 374 545 3.7E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 SUPERFAMILY SSF56219 473 733 8.49E-29 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 SUPERFAMILY SSF56219 769 845 8.49E-29 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 PANTHER PTHR33607:SF1 1 484 2.2E-285 T 22-04-2016 VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 PANTHER PTHR33607:SF1 751 853 2.2E-285 T 22-04-2016 VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 PANTHER PTHR33607:SF1 504 726 2.2E-285 T 22-04-2016 VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 Gene3D G3DSA:3.60.10.10 475 744 4.7E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 Gene3D G3DSA:3.60.10.10 780 845 4.7E-20 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 Pfam PF00932 Lamin Tail Domain 26 134 1.9E-15 T 22-04-2016 IPR001322 Lamin Tail Domain VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 SUPERFAMILY SSF74853 39 132 7.72E-7 T 22-04-2016 IPR001322 Lamin Tail Domain VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 PANTHER PTHR33607 1 484 2.2E-285 T 22-04-2016 VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 PANTHER PTHR33607 751 853 2.2E-285 T 22-04-2016 VCLMA_RS12210 ee5e0e29c5a0ecc0671f27fa1e17c64c 869 PANTHER PTHR33607 504 726 2.2E-285 T 22-04-2016 VCLMA_RS06280 f5dd1ea843fe4405be4d86944dc20640 212 Pfam PF13505 Outer membrane protein beta-barrel domain 7 211 2.4E-10 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VCLMA_RS06280 f5dd1ea843fe4405be4d86944dc20640 212 Gene3D G3DSA:2.40.160.20 128 211 6.1E-7 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VCLMA_RS06280 f5dd1ea843fe4405be4d86944dc20640 212 SUPERFAMILY SSF56925 59 211 1.05E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VCLMA_RS02355 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 SMART SM00732 3 104 4.5E-35 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VCLMA_RS02355 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 139 24.321 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VCLMA_RS02355 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 SUPERFAMILY SSF53098 3 137 3.64E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS02355 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 Pfam PF03652 Holliday junction resolvase 4 136 1.7E-35 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VCLMA_RS02355 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 Gene3D G3DSA:3.30.420.140 3 138 9.6E-41 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 VCLMA_RS02355 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 136 1.4E-48 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VCLMA_RS02355 3453bb4c5ce571dfd9ec7ff0e74ce3c4 140 PANTHER PTHR33317 4 139 6.7E-39 T 22-04-2016 VCLMA_RS07195 0e9e6ff5af4ec3603811bc48fcae5ff9 280 PANTHER PTHR32243 1 278 2.9E-122 T 22-04-2016 VCLMA_RS07195 0e9e6ff5af4ec3603811bc48fcae5ff9 280 SUPERFAMILY SSF161098 7 277 9.68E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07195 0e9e6ff5af4ec3603811bc48fcae5ff9 280 PANTHER PTHR32243:SF31 1 278 2.9E-122 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 VCLMA_RS07195 0e9e6ff5af4ec3603811bc48fcae5ff9 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 275 1.0E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07195 0e9e6ff5af4ec3603811bc48fcae5ff9 280 Gene3D G3DSA:1.10.3720.10 5 269 5.5E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03870 fde28f24a75ab217f41fa7f8fea4fff0 98 PIRSF PIRSF002736 1 97 2.6E-41 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VCLMA_RS03870 fde28f24a75ab217f41fa7f8fea4fff0 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 27.744 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VCLMA_RS03870 fde28f24a75ab217f41fa7f8fea4fff0 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 80 1.0E-33 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VCLMA_RS03870 fde28f24a75ab217f41fa7f8fea4fff0 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.0E-34 T 22-04-2016 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 VCLMA_RS03870 fde28f24a75ab217f41fa7f8fea4fff0 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 3.1E-31 T 22-04-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein VCLMA_RS05190 dd6c9287cf71beea37773fd94a1455dc 489 PANTHER PTHR10799 185 488 4.1E-18 T 22-04-2016 VCLMA_RS05190 dd6c9287cf71beea37773fd94a1455dc 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 335 486 2.9E-36 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05190 dd6c9287cf71beea37773fd94a1455dc 489 SUPERFAMILY SSF55073 340 488 5.34E-36 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS05190 dd6c9287cf71beea37773fd94a1455dc 489 Gene3D G3DSA:3.30.70.270 337 488 5.3E-41 T 22-04-2016 VCLMA_RS05190 dd6c9287cf71beea37773fd94a1455dc 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 333 488 6.1E-40 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05190 dd6c9287cf71beea37773fd94a1455dc 489 SMART SM00267 324 489 1.4E-40 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05190 dd6c9287cf71beea37773fd94a1455dc 489 PANTHER PTHR10799:SF706 185 488 4.1E-18 T 22-04-2016 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 Gene3D G3DSA:1.20.58.180 215 298 9.5E-37 T 22-04-2016 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 PANTHER PTHR30075 1 305 4.0E-280 T 22-04-2016 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 1.3E-149 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 Gene3D G3DSA:3.30.930.10 4 214 1.6E-105 T 22-04-2016 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 SUPERFAMILY SSF55681 8 292 2.19E-134 T 22-04-2016 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.2E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.2E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.2E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.2E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.2E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.2E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 4.1E-174 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS00100 49b5d93aba74d574053ffad1a2fca1e2 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.172 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 PANTHER PTHR21342:SF1 1 161 3.1E-78 T 22-04-2016 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 SUPERFAMILY SSF52374 8 162 7.78E-45 T 22-04-2016 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 Gene3D G3DSA:3.40.50.620 8 162 8.0E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 4.0E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 4.0E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 4.0E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 4.0E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 4.0E-50 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.401 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 68 7.3E-21 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 9.5E-59 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 PANTHER PTHR21342 1 161 3.1E-78 T 22-04-2016 VCLMA_RS01070 633876b22a0bcfce63db5eb164d69e62 164 Pfam PF01467 Cytidylyltransferase-like 10 138 9.3E-21 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VCLMA_RS02205 d4e05606b8d8c5b9efbfb1e5f1d209a6 253 PANTHER PTHR34390:SF2 1 253 5.3E-142 T 22-04-2016 VCLMA_RS02205 d4e05606b8d8c5b9efbfb1e5f1d209a6 253 Gene3D G3DSA:1.10.10.60 3 41 5.8E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS02205 d4e05606b8d8c5b9efbfb1e5f1d209a6 253 PANTHER PTHR34390 1 253 5.3E-142 T 22-04-2016 VCLMA_RS02205 d4e05606b8d8c5b9efbfb1e5f1d209a6 253 Pfam PF06738 Putative threonine/serine exporter 10 247 1.3E-67 T 22-04-2016 IPR010619 Putative threonine/serine exporter VCLMA_RS06110 488abab33701d995a8abad40463be71c 483 SUPERFAMILY SSF109604 270 468 8.79E-33 T 22-04-2016 VCLMA_RS06110 488abab33701d995a8abad40463be71c 483 SUPERFAMILY SSF158472 227 266 5.23E-5 T 22-04-2016 VCLMA_RS06110 488abab33701d995a8abad40463be71c 483 SMART SM00304 217 269 4.4E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06110 488abab33701d995a8abad40463be71c 483 Pfam PF01966 HD domain 295 429 1.3E-17 T 22-04-2016 IPR006674 HD domain VCLMA_RS06110 488abab33701d995a8abad40463be71c 483 SMART SM00471 289 439 6.9E-9 T 22-04-2016 IPR003607 HD/PDEase domain VCLMA_RS06110 488abab33701d995a8abad40463be71c 483 Gene3D G3DSA:1.10.3210.10 288 473 4.4E-21 T 22-04-2016 IPR006674 HD domain VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 272 31.417 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 PANTHER PTHR20861 1 290 3.2E-102 T 22-04-2016 VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 Gene3D G3DSA:3.30.230.10 8 160 3.0E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 SUPERFAMILY SSF54211 6 157 3.72E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 1.4E-94 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 Gene3D G3DSA:3.30.70.890 163 279 3.2E-42 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 SUPERFAMILY SSF55060 162 278 1.68E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 4.8E-8 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 PIRSF PIRSF010376 4 280 1.9E-87 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 PANTHER PTHR20861:SF2 1 290 3.2E-102 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10045 c830dacf6b0a39e8c5fe749911825376 290 Pfam PF08544 GHMP kinases C terminal 205 259 2.4E-6 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VCLMA_RS09720 8c18c029d6737378c9ef1eac743d628f 403 SUPERFAMILY SSF53901 1 251 3.74E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09720 8c18c029d6737378c9ef1eac743d628f 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.4E-46 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal VCLMA_RS09720 8c18c029d6737378c9ef1eac743d628f 403 SUPERFAMILY SSF53901 213 401 2.67E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09720 8c18c029d6737378c9ef1eac743d628f 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.5E-15 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VCLMA_RS09720 8c18c029d6737378c9ef1eac743d628f 403 Gene3D G3DSA:3.40.47.10 261 402 1.2E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09720 8c18c029d6737378c9ef1eac743d628f 403 Gene3D G3DSA:3.40.47.10 6 257 1.1E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09720 8c18c029d6737378c9ef1eac743d628f 403 PANTHER PTHR11712 1 401 4.8E-177 T 22-04-2016 VCLMA_RS09720 8c18c029d6737378c9ef1eac743d628f 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 1.8E-28 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal VCLMA_RS09720 8c18c029d6737378c9ef1eac743d628f 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site VCLMA_RS07750 746efb94b1d96af48a000d7d69c955b7 220 PANTHER PTHR24220 4 218 6.2E-136 T 22-04-2016 VCLMA_RS07750 746efb94b1d96af48a000d7d69c955b7 220 SUPERFAMILY SSF52540 5 201 6.28E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07750 746efb94b1d96af48a000d7d69c955b7 220 SMART SM00382 28 212 2.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS07750 746efb94b1d96af48a000d7d69c955b7 220 Pfam PF00005 ABC transporter 20 163 4.0E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS07750 746efb94b1d96af48a000d7d69c955b7 220 Gene3D G3DSA:3.40.50.300 3 199 5.9E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07750 746efb94b1d96af48a000d7d69c955b7 220 PANTHER PTHR24220:SF485 4 218 6.2E-136 T 22-04-2016 VCLMA_RS04505 9c00c6128be476ea23f89672bbe94646 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS04505 9c00c6128be476ea23f89672bbe94646 169 SUPERFAMILY SSF51261 17 166 5.41E-55 T 22-04-2016 IPR011055 Duplicated hybrid motif VCLMA_RS04505 9c00c6128be476ea23f89672bbe94646 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.0E-48 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS04505 9c00c6128be476ea23f89672bbe94646 169 PANTHER PTHR30175 1 118 7.8E-55 T 22-04-2016 VCLMA_RS04505 9c00c6128be476ea23f89672bbe94646 169 Gene3D G3DSA:2.70.70.10 17 166 3.4E-59 T 22-04-2016 VCLMA_RS04505 9c00c6128be476ea23f89672bbe94646 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 7.7E-50 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS12765 6f490eb1d9e4008ce7a6247a7c3fb738 308 Pfam PF13673 Acetyltransferase (GNAT) domain 66 144 4.2E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS12765 6f490eb1d9e4008ce7a6247a7c3fb738 308 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 296 1.8E-43 T 22-04-2016 IPR012660 Thioesterase, putative VCLMA_RS12765 6f490eb1d9e4008ce7a6247a7c3fb738 308 SUPERFAMILY SSF55729 2 149 5.67E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS12765 6f490eb1d9e4008ce7a6247a7c3fb738 308 PANTHER PTHR13355:SF8 4 160 1.1E-75 T 22-04-2016 VCLMA_RS12765 6f490eb1d9e4008ce7a6247a7c3fb738 308 SUPERFAMILY SSF54637 154 296 1.79E-38 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS12765 6f490eb1d9e4008ce7a6247a7c3fb738 308 Gene3D G3DSA:3.40.630.30 5 144 6.8E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS12765 6f490eb1d9e4008ce7a6247a7c3fb738 308 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 9.1E-50 T 22-04-2016 IPR012660 Thioesterase, putative VCLMA_RS12765 6f490eb1d9e4008ce7a6247a7c3fb738 308 Gene3D G3DSA:3.10.129.10 145 297 1.0E-61 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS12765 6f490eb1d9e4008ce7a6247a7c3fb738 308 PANTHER PTHR13355 4 160 1.1E-75 T 22-04-2016 VCLMA_RS01030 ce9b69062c17b38967f0b878895203fb 196 Gene3D G3DSA:1.10.357.10 5 192 6.0E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS01030 ce9b69062c17b38967f0b878895203fb 196 PANTHER PTHR30055 1 191 5.7E-115 T 22-04-2016 VCLMA_RS01030 ce9b69062c17b38967f0b878895203fb 196 SUPERFAMILY SSF46689 5 78 2.24E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS01030 ce9b69062c17b38967f0b878895203fb 196 PANTHER PTHR30055:SF58 1 191 5.7E-115 T 22-04-2016 VCLMA_RS01030 ce9b69062c17b38967f0b878895203fb 196 SUPERFAMILY SSF48498 81 191 6.52E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VCLMA_RS01030 ce9b69062c17b38967f0b878895203fb 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 58 3.3E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS01030 ce9b69062c17b38967f0b878895203fb 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 40.963 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VCLMA_RS02530 3d25b7e9c05a44be6dabf5df51192406 168 SUPERFAMILY SSF55083 1 148 5.36E-37 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02530 3d25b7e9c05a44be6dabf5df51192406 168 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 6.1E-24 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02530 3d25b7e9c05a44be6dabf5df51192406 168 PANTHER PTHR20941 1 166 7.9E-106 T 22-04-2016 VCLMA_RS02530 3d25b7e9c05a44be6dabf5df51192406 168 Gene3D G3DSA:3.30.70.560 3 149 7.8E-37 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02530 3d25b7e9c05a44be6dabf5df51192406 168 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 129 1.1E-32 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02530 3d25b7e9c05a44be6dabf5df51192406 168 PANTHER PTHR20941:SF12 1 166 7.9E-106 T 22-04-2016 VCLMA_RS11385 57b3a0cd0bb92ea1cc72437c229ce1d8 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 238 1.0E-98 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VCLMA_RS11385 57b3a0cd0bb92ea1cc72437c229ce1d8 243 PANTHER PTHR30456:SF0 2 243 8.3E-147 T 22-04-2016 VCLMA_RS11385 57b3a0cd0bb92ea1cc72437c229ce1d8 243 SUPERFAMILY SSF63892 4 241 1.44E-101 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VCLMA_RS11385 57b3a0cd0bb92ea1cc72437c229ce1d8 243 Gene3D G3DSA:3.20.20.70 3 241 5.6E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS11385 57b3a0cd0bb92ea1cc72437c229ce1d8 243 PANTHER PTHR30456 2 243 8.3E-147 T 22-04-2016 VCLMA_RS11385 57b3a0cd0bb92ea1cc72437c229ce1d8 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.7E-105 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VCLMA_RS11385 57b3a0cd0bb92ea1cc72437c229ce1d8 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 133.73 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 VCLMA_RS04730 7f29a1da8eda870e465ed955fd227ca0 138 PANTHER PTHR10374 1 130 7.8E-61 T 22-04-2016 VCLMA_RS04730 7f29a1da8eda870e465ed955fd227ca0 138 Gene3D G3DSA:3.10.180.10 4 131 3.1E-48 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCLMA_RS04730 7f29a1da8eda870e465ed955fd227ca0 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 4.2E-23 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCLMA_RS04730 7f29a1da8eda870e465ed955fd227ca0 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VCLMA_RS04730 7f29a1da8eda870e465ed955fd227ca0 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 3 136 1.6E-68 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VCLMA_RS04730 7f29a1da8eda870e465ed955fd227ca0 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 VCLMA_RS04730 7f29a1da8eda870e465ed955fd227ca0 138 SUPERFAMILY SSF54593 2 130 2.82E-36 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCLMA_RS11215 56a75c7495ffe92fe7166a7ea5fef400 296 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 41 127 2.5E-25 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VCLMA_RS11215 56a75c7495ffe92fe7166a7ea5fef400 296 Gene3D G3DSA:3.90.1170.20 16 149 1.9E-50 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 VCLMA_RS11215 56a75c7495ffe92fe7166a7ea5fef400 296 SUPERFAMILY SSF54675 13 128 8.24E-32 T 22-04-2016 VCLMA_RS11215 56a75c7495ffe92fe7166a7ea5fef400 296 PIRSF PIRSF006250 16 296 2.1E-99 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VCLMA_RS11215 56a75c7495ffe92fe7166a7ea5fef400 296 SUPERFAMILY SSF51690 130 294 1.73E-60 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VCLMA_RS11215 56a75c7495ffe92fe7166a7ea5fef400 296 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 1.4E-58 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 VCLMA_RS11215 56a75c7495ffe92fe7166a7ea5fef400 296 PANTHER PTHR32179 1 294 3.4E-131 T 22-04-2016 VCLMA_RS11215 56a75c7495ffe92fe7166a7ea5fef400 296 Gene3D G3DSA:3.20.20.70 150 283 1.5E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS11215 56a75c7495ffe92fe7166a7ea5fef400 296 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 28 294 3.3E-93 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 PANTHER PTHR10617 1 287 1.9E-136 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 PANTHER PTHR10617 331 395 1.9E-136 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 9.82E-9 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 9.82E-9 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 9.82E-9 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 SUPERFAMILY SSF160996 191 339 3.66E-42 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 Gene3D G3DSA:3.50.50.60 2 187 3.1E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 Gene3D G3DSA:3.50.50.60 340 393 3.1E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 PANTHER PTHR10617:SF103 1 287 1.9E-136 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 PANTHER PTHR10617:SF103 331 395 1.9E-136 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 Pfam PF03486 HI0933-like protein 6 393 2.5E-156 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 Gene3D G3DSA:2.40.30.10 190 270 4.4E-28 T 22-04-2016 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 2.6E-129 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 SUPERFAMILY SSF51905 1 189 3.59E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 SUPERFAMILY SSF51905 338 395 3.59E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00415 b3c4b559462e727769579d0e0f7cd293 395 Gene3D G3DSA:1.10.8.260 271 322 1.2E-24 T 22-04-2016 IPR023166 HI0933 insert-like domain VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 Gene3D G3DSA:1.10.10.10 168 217 3.8E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 Pfam PF04545 Sigma-70, region 4 263 316 7.1E-18 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 91 318 5.4E-37 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 303 314 1.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 288 303 1.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 143 151 1.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 119 132 1.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 PRINTS PR00046 Major sigma-70 factor signature 267 279 1.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 288 314 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 Pfam PF04542 Sigma-70 region 2 95 164 6.6E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 9 329 39.756 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 PANTHER PTHR30603:SF15 11 334 6.0E-186 T 22-04-2016 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 Gene3D G3DSA:1.10.601.10 28 164 5.5E-59 T 22-04-2016 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 Pfam PF00140 Sigma-70 factor, region 1.2 57 90 2.7E-13 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 SUPERFAMILY SSF88659 168 241 1.83E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 119 132 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 SUPERFAMILY SSF88946 57 165 5.89E-46 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 51 329 1.4E-138 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 SUPERFAMILY SSF88659 225 324 1.1E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 Gene3D G3DSA:1.10.10.10 257 323 1.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 PANTHER PTHR30603 11 334 6.0E-186 T 22-04-2016 VCLMA_RS02575 506580a629dce9941525a7797312cce5 335 Pfam PF04539 Sigma-70 region 3 175 248 8.2E-22 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 Pfam PF00672 HAMP domain 157 221 2.1E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 SMART SM00304 173 225 2.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 Gene3D G3DSA:3.30.565.10 290 436 1.1E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 PANTHER PTHR24423 167 437 1.8E-61 T 22-04-2016 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 PANTHER PTHR24423 1 9 1.8E-61 T 22-04-2016 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 PANTHER PTHR24423:SF427 167 437 1.8E-61 T 22-04-2016 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 PANTHER PTHR24423:SF427 1 9 1.8E-61 T 22-04-2016 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 SUPERFAMILY SSF55874 289 434 5.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 1.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 1.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 1.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 280 8.9E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 SMART SM00388 226 286 3.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 SMART SM00387 325 435 2.4E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 SUPERFAMILY SSF47384 220 281 6.47E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 433 7.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12635 3ea1d8697555428a559ea04b649f0961 438 Gene3D G3DSA:1.10.287.130 217 280 1.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS09915 7feb12fc4eb4a09736e84313c0352814 115 Gene3D G3DSA:3.40.30.10 2 114 5.5E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS09915 7feb12fc4eb4a09736e84313c0352814 115 SUPERFAMILY SSF52833 2 114 7.29E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS09915 7feb12fc4eb4a09736e84313c0352814 115 PANTHER PTHR30041:SF3 1 115 8.3E-57 T 22-04-2016 VCLMA_RS09915 7feb12fc4eb4a09736e84313c0352814 115 Pfam PF03960 ArsC family 6 112 2.7E-18 T 22-04-2016 IPR006660 Arsenate reductase-like VCLMA_RS09915 7feb12fc4eb4a09736e84313c0352814 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 1.6E-31 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR VCLMA_RS09915 7feb12fc4eb4a09736e84313c0352814 115 PANTHER PTHR30041 1 115 8.3E-57 T 22-04-2016 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 PRINTS PR00773 GrpE protein signature 97 112 6.5E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 PRINTS PR00773 GrpE protein signature 69 85 6.5E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 PRINTS PR00773 GrpE protein signature 179 198 6.5E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 PRINTS PR00773 GrpE protein signature 152 167 6.5E-29 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 SUPERFAMILY SSF51064 145 200 1.15E-19 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 ProSitePatterns PS01071 grpE protein signature. 155 198 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 SUPERFAMILY SSF58014 46 144 7.32E-28 T 22-04-2016 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 Gene3D G3DSA:2.30.22.10 144 200 1.9E-27 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 PANTHER PTHR21237 20 200 4.8E-65 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 Hamap MF_01151 Protein GrpE [grpE]. 2 200 22.219 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 Gene3D G3DSA:3.90.20.20 44 143 4.0E-32 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil VCLMA_RS04000 11af5876a9be2dd9453b04c3cbfd69dc 200 Pfam PF01025 GrpE 39 200 3.4E-54 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 VCLMA_RS05270 ab4a174c0a225f2957f123ea68ecfb0d 269 Pfam PF07103 Protein of unknown function (DUF1365) 14 256 1.7E-69 T 22-04-2016 IPR010775 Protein of unknown function DUF1365 VCLMA_RS05270 ab4a174c0a225f2957f123ea68ecfb0d 269 PANTHER PTHR33973 10 268 3.5E-77 T 22-04-2016 VCLMA_RS11745 2ce516dd5d53150393b3c0b743532923 185 PIRSF PIRSF006118 10 185 1.9E-74 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VCLMA_RS11745 2ce516dd5d53150393b3c0b743532923 185 Gene3D G3DSA:3.40.50.1000 15 175 9.9E-46 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS11745 2ce516dd5d53150393b3c0b743532923 185 SUPERFAMILY SSF56784 21 178 3.47E-40 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS11745 2ce516dd5d53150393b3c0b743532923 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 175 1.5E-62 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VCLMA_RS11745 2ce516dd5d53150393b3c0b743532923 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 157 2.2E-8 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS11745 2ce516dd5d53150393b3c0b743532923 185 PANTHER PTHR21485 6 181 2.5E-64 T 22-04-2016 VCLMA_RS09735 a764963c19d3bc7ca97c52fba47a2d73 87 Pfam PF08891 YfcL protein 4 84 3.3E-32 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL VCLMA_RS02220 a374522101cc6e7e10d4517318d9a77f 269 Gene3D G3DSA:3.60.21.10 167 263 5.1E-56 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS02220 a374522101cc6e7e10d4517318d9a77f 269 Gene3D G3DSA:3.60.21.10 4 130 5.1E-56 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS02220 a374522101cc6e7e10d4517318d9a77f 269 PANTHER PTHR24032 2 266 2.5E-155 T 22-04-2016 VCLMA_RS02220 a374522101cc6e7e10d4517318d9a77f 269 PIRSF PIRSF000903 1 269 1.5E-122 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VCLMA_RS02220 a374522101cc6e7e10d4517318d9a77f 269 PANTHER PTHR24032:SF27 2 266 2.5E-155 T 22-04-2016 VCLMA_RS02220 a374522101cc6e7e10d4517318d9a77f 269 SUPERFAMILY SSF56300 4 252 8.2E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS02220 a374522101cc6e7e10d4517318d9a77f 269 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2 266 3.3E-115 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VCLMA_RS02220 a374522101cc6e7e10d4517318d9a77f 269 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 50.38 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VCLMA_RS02220 a374522101cc6e7e10d4517318d9a77f 269 Pfam PF00149 Calcineurin-like phosphoesterase 5 156 7.6E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VCLMA_RS10920 750216e82c1cf36130483e23c2a7df1d 59 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 3.2E-24 T 22-04-2016 IPR021932 Protein of unknown function DUF3545 VCLMA_RS14375 b2188acde55f54d09b5b09cbb6a995e4 88 PANTHER PTHR15184:SF34 36 88 1.8E-38 T 22-04-2016 VCLMA_RS14375 b2188acde55f54d09b5b09cbb6a995e4 88 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 35 79 2.2E-6 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS14375 b2188acde55f54d09b5b09cbb6a995e4 88 PANTHER PTHR15184 36 88 1.8E-38 T 22-04-2016 VCLMA_RS14375 b2188acde55f54d09b5b09cbb6a995e4 88 SUPERFAMILY SSF52540 5 88 3.77E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS14375 b2188acde55f54d09b5b09cbb6a995e4 88 Gene3D G3DSA:3.40.50.300 8 88 3.1E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS14375 b2188acde55f54d09b5b09cbb6a995e4 88 PANTHER PTHR15184 2 17 1.8E-38 T 22-04-2016 VCLMA_RS14375 b2188acde55f54d09b5b09cbb6a995e4 88 PANTHER PTHR15184:SF34 2 17 1.8E-38 T 22-04-2016 VCLMA_RS09385 bbc4c99a2bab9b81436a6a2dd284afb3 71 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 7.0E-33 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VCLMA_RS09385 bbc4c99a2bab9b81436a6a2dd284afb3 71 SUPERFAMILY SSF158651 1 70 1.28E-28 T 22-04-2016 VCLMA_RS09385 bbc4c99a2bab9b81436a6a2dd284afb3 71 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 23.131 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VCLMA_RS09385 bbc4c99a2bab9b81436a6a2dd284afb3 71 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 3.9E-21 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VCLMA_RS09385 bbc4c99a2bab9b81436a6a2dd284afb3 71 PIRSF PIRSF006188 1 71 6.9E-37 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 VCLMA_RS09385 bbc4c99a2bab9b81436a6a2dd284afb3 71 Gene3D G3DSA:1.10.3390.10 1 70 2.5E-33 T 22-04-2016 IPR023202 YejL-like domain VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 5.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 5.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 5.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 5.0E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 SUPERFAMILY SSF51735 2 235 4.58E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 Pfam PF00106 short chain dehydrogenase 3 192 1.7E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 Gene3D G3DSA:3.40.50.720 3 235 2.4E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 PANTHER PTHR24322 148 182 7.1E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 PANTHER PTHR24322 5 129 7.1E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 PANTHER PTHR24322:SF540 148 182 7.1E-52 T 22-04-2016 VCLMA_RS08325 513af3d54da00c48c8aa4bdce6f43a62 235 PANTHER PTHR24322:SF540 5 129 7.1E-52 T 22-04-2016 VCLMA_RS11540 3a60ab0088a7a03f67dbba2ed204458f 363 PANTHER PTHR11835 1 360 8.3E-209 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VCLMA_RS11540 3a60ab0088a7a03f67dbba2ed204458f 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 51.504 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VCLMA_RS11540 3a60ab0088a7a03f67dbba2ed204458f 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 8.6E-138 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VCLMA_RS11540 3a60ab0088a7a03f67dbba2ed204458f 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 VCLMA_RS11540 3a60ab0088a7a03f67dbba2ed204458f 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 355 1.1E-164 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 VCLMA_RS11540 3a60ab0088a7a03f67dbba2ed204458f 363 PANTHER PTHR11835:SF35 1 360 8.3E-209 T 22-04-2016 VCLMA_RS11540 3a60ab0088a7a03f67dbba2ed204458f 363 SUPERFAMILY SSF53659 4 360 3.96E-123 T 22-04-2016 VCLMA_RS11540 3a60ab0088a7a03f67dbba2ed204458f 363 Gene3D G3DSA:3.40.718.10 4 359 4.0E-134 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VCLMA_RS11540 3a60ab0088a7a03f67dbba2ed204458f 363 SMART SM01329 7 356 2.1E-204 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 SUPERFAMILY SSF56645 121 356 8.25E-42 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 Gene3D G3DSA:2.40.110.10 238 349 6.3E-15 T 22-04-2016 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 Gene3D G3DSA:1.10.540.10 96 235 3.9E-30 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 PANTHER PTHR10909:SF321 50 532 3.2E-301 T 22-04-2016 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 Gene3D G3DSA:1.20.140.10 350 508 3.1E-25 T 22-04-2016 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 145 234 2.5E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 PANTHER PTHR10909 50 532 3.2E-301 T 22-04-2016 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 5.2E-15 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 SUPERFAMILY SSF47203 361 508 6.28E-24 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VCLMA_RS10355 6d6af5683919e9061ff234ed7fe91d82 814 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 1.6E-113 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VCLMA_RS10640 36a7c80d47505edbca96c4654f6d88ab 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.95 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VCLMA_RS10640 36a7c80d47505edbca96c4654f6d88ab 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 2 197 4.4E-107 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VCLMA_RS10640 36a7c80d47505edbca96c4654f6d88ab 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 1.3E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VCLMA_RS10640 36a7c80d47505edbca96c4654f6d88ab 198 PIRSF PIRSF006102 1 198 3.0E-67 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VCLMA_RS10640 36a7c80d47505edbca96c4654f6d88ab 198 PANTHER PTHR30335:SF1 2 198 3.2E-147 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VCLMA_RS10640 36a7c80d47505edbca96c4654f6d88ab 198 PANTHER PTHR30335 2 198 3.2E-147 T 22-04-2016 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 Gene3D G3DSA:3.40.50.1820 6 264 1.2E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 SUPERFAMILY SSF53474 5 264 2.92E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 4.5E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 4.5E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 4.5E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.5E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 PRINTS PR00412 Epoxide hydrolase signature 101 114 1.8E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 PRINTS PR00412 Epoxide hydrolase signature 45 60 1.8E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 PRINTS PR00412 Epoxide hydrolase signature 240 262 1.8E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 PANTHER PTHR10992:SF885 6 265 3.9E-114 T 22-04-2016 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 Pfam PF12697 Alpha/beta hydrolase family 23 254 1.1E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS02515 07d3484c3c9e9508ba9b6f087a9b5266 267 PANTHER PTHR10992 6 265 3.9E-114 T 22-04-2016 VCLMA_RS04530 ac6aec25f92a82da4a257726975e1b50 250 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 5 245 28.223 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VCLMA_RS04530 ac6aec25f92a82da4a257726975e1b50 250 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 11 227 4.0E-42 T 22-04-2016 VCLMA_RS04530 ac6aec25f92a82da4a257726975e1b50 250 PANTHER PTHR37468 1 241 7.1E-102 T 22-04-2016 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 1.8E-24 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 Gene3D G3DSA:3.40.50.980 80 266 8.6E-47 T 22-04-2016 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.0E-21 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 SUPERFAMILY SSF56801 8 644 1.44E-184 T 22-04-2016 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 Pfam PF00501 AMP-binding enzyme 84 522 2.8E-92 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 Gene3D G3DSA:2.30.38.10 439 515 8.9E-9 T 22-04-2016 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 PANTHER PTHR24095 6 649 0.0 T 22-04-2016 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.733 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 PANTHER PTHR24095:SF178 6 649 0.0 T 22-04-2016 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 Gene3D G3DSA:3.40.50.980 267 424 2.3E-26 T 22-04-2016 VCLMA_RS01425 246a071ba620beea5bdda93f8b954281 649 Gene3D G3DSA:3.30.300.30 518 638 5.6E-28 T 22-04-2016 VCLMA_RS00975 4c2f9948dcc8802373ce9055322089b2 653 Pfam PF01032 FecCD transport family 371 648 3.1E-67 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS00975 4c2f9948dcc8802373ce9055322089b2 653 Pfam PF01032 FecCD transport family 13 323 1.0E-61 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS00975 4c2f9948dcc8802373ce9055322089b2 653 SUPERFAMILY SSF81345 336 648 2.88E-63 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS00975 4c2f9948dcc8802373ce9055322089b2 653 PANTHER PTHR30472:SF16 242 653 1.3E-169 T 22-04-2016 VCLMA_RS00975 4c2f9948dcc8802373ce9055322089b2 653 SUPERFAMILY SSF81345 5 323 2.35E-55 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS00975 4c2f9948dcc8802373ce9055322089b2 653 Gene3D G3DSA:1.10.3470.10 4 326 4.2E-65 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS00975 4c2f9948dcc8802373ce9055322089b2 653 Gene3D G3DSA:1.10.3470.10 338 652 1.5E-71 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS00975 4c2f9948dcc8802373ce9055322089b2 653 PANTHER PTHR30472 242 653 1.3E-169 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 Gene3D G3DSA:1.10.287.130 203 258 8.3E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 SMART SM00387 320 431 1.9E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 Gene3D G3DSA:3.40.50.2300 450 569 2.7E-40 T 22-04-2016 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 Pfam PF00072 Response regulator receiver domain 454 564 5.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 430 5.7E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 7.0E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 7.0E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 7.0E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 7.0E-19 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 SUPERFAMILY SSF52172 450 569 8.11E-38 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 SUPERFAMILY SSF55874 262 429 1.96E-49 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 Gene3D G3DSA:3.30.565.10 259 430 7.7E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 SMART SM00448 452 564 2.7E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 Pfam PF00512 His Kinase A (phospho-acceptor) domain 209 273 1.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 PANTHER PTHR24423 14 21 4.8E-139 T 22-04-2016 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 PANTHER PTHR24423 190 570 4.8E-139 T 22-04-2016 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 SUPERFAMILY SSF47384 194 274 6.87E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS06810 fab7de8cc55e8bfacb8367e51f4ecde0 570 SMART SM00388 209 273 1.2E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS04535 11aec75d6aab59934e69679b2e48ddbf 291 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 281 1.0E-122 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VCLMA_RS04535 11aec75d6aab59934e69679b2e48ddbf 291 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 154 280 9.6E-47 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VCLMA_RS04535 11aec75d6aab59934e69679b2e48ddbf 291 PANTHER PTHR38685:SF1 1 291 2.9E-95 T 22-04-2016 VCLMA_RS04535 11aec75d6aab59934e69679b2e48ddbf 291 Gene3D G3DSA:3.30.1400.10 151 287 5.1E-59 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VCLMA_RS04535 11aec75d6aab59934e69679b2e48ddbf 291 SUPERFAMILY SSF64383 153 285 3.27E-49 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VCLMA_RS04535 11aec75d6aab59934e69679b2e48ddbf 291 PANTHER PTHR38685 1 291 2.9E-95 T 22-04-2016 VCLMA_RS04535 11aec75d6aab59934e69679b2e48ddbf 291 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 154 285 2.0E-74 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VCLMA_RS04535 11aec75d6aab59934e69679b2e48ddbf 291 SMART SM00771 151 281 7.1E-76 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 VCLMA_RS04535 11aec75d6aab59934e69679b2e48ddbf 291 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 283 24.936 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 PANTHER PTHR30146:SF46 1 330 1.5E-249 T 22-04-2016 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.6E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.6E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 Gene3D G3DSA:1.10.260.40 3 57 7.0E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 Gene3D G3DSA:3.40.50.2300 58 166 1.1E-44 T 22-04-2016 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 Pfam PF13377 Periplasmic binding protein-like domain 168 320 4.9E-31 T 22-04-2016 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 8.1E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 PANTHER PTHR30146 1 330 1.5E-249 T 22-04-2016 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 Gene3D G3DSA:3.40.50.2300 167 316 9.9E-51 T 22-04-2016 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 SUPERFAMILY SSF53822 61 314 4.07E-66 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 SMART SM00354 1 71 8.4E-29 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS06070 8af4638b8b90e5d6c5b9b977073b25ea 340 SUPERFAMILY SSF47413 2 59 1.58E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS07680 bf55a9a81c385ede2e774aa2ed5e9b67 553 SMART SM00448 9 127 5.5E-13 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07680 bf55a9a81c385ede2e774aa2ed5e9b67 553 SUPERFAMILY SSF52172 8 143 6.4E-20 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS07680 bf55a9a81c385ede2e774aa2ed5e9b67 553 PIRSF PIRSF011521 2 547 2.7E-276 T 22-04-2016 IPR014460 Signal transduction response regulator, predicted, VieB VCLMA_RS07680 bf55a9a81c385ede2e774aa2ed5e9b67 553 Pfam PF00072 Response regulator receiver domain 11 127 4.9E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07680 bf55a9a81c385ede2e774aa2ed5e9b67 553 Gene3D G3DSA:1.25.40.10 172 302 1.0E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS07680 bf55a9a81c385ede2e774aa2ed5e9b67 553 SUPERFAMILY SSF48452 170 305 1.62E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS07680 bf55a9a81c385ede2e774aa2ed5e9b67 553 PANTHER PTHR26402:SF316 9 154 2.9E-28 T 22-04-2016 VCLMA_RS07680 bf55a9a81c385ede2e774aa2ed5e9b67 553 PANTHER PTHR26402 9 154 2.9E-28 T 22-04-2016 VCLMA_RS07680 bf55a9a81c385ede2e774aa2ed5e9b67 553 Gene3D G3DSA:3.40.50.2300 4 138 2.5E-20 T 22-04-2016 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 328 335 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 Gene3D G3DSA:3.30.70.260 298 381 2.1E-28 T 22-04-2016 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 Gene3D G3DSA:3.40.190.10 110 196 1.6E-31 T 22-04-2016 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 SUPERFAMILY SSF48600 7 95 1.83E-20 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 Gene3D G3DSA:3.40.190.10 197 276 5.2E-26 T 22-04-2016 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 SUPERFAMILY SSF53850 108 294 3.8E-55 T 22-04-2016 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 PANTHER PTHR21022 1 382 5.7E-162 T 22-04-2016 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 Pfam PF00800 Prephenate dehydratase 109 290 2.0E-58 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 264 286 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 PANTHER PTHR21022:SF0 1 382 5.7E-162 T 22-04-2016 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 8 91 1.9E-27 T 22-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 PIRSF PIRSF001500 1 383 4.0E-146 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 SMART SM00830 12 93 9.3E-24 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 Gene3D G3DSA:1.20.59.10 4 109 1.9E-42 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 SUPERFAMILY SSF55021 283 380 5.61E-27 T 22-04-2016 VCLMA_RS03425 6fcb6df56c1386ccc7b7d1bea5994c88 391 Pfam PF01817 Chorismate mutase type II 12 91 2.5E-18 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VCLMA_RS03195 71c3140000f209b017f794ef5f6d34a2 175 Pfam PF02036 SCP-2 sterol transfer family 44 134 2.2E-18 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VCLMA_RS03195 71c3140000f209b017f794ef5f6d34a2 175 PANTHER PTHR10094 1 145 2.9E-70 T 22-04-2016 VCLMA_RS03195 71c3140000f209b017f794ef5f6d34a2 175 SUPERFAMILY SSF55718 42 139 8.95E-21 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VCLMA_RS03195 71c3140000f209b017f794ef5f6d34a2 175 PANTHER PTHR10094:SF16 1 145 2.9E-70 T 22-04-2016 VCLMA_RS03195 71c3140000f209b017f794ef5f6d34a2 175 Gene3D G3DSA:3.30.1050.10 49 136 5.3E-12 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VCLMA_RS03195 71c3140000f209b017f794ef5f6d34a2 175 PIRSF PIRSF025550 1 174 1.4E-86 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VCLMA_RS11020 7f09c9d5112274a1a013eec5907a8068 228 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 225 2.5E-94 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VCLMA_RS11020 7f09c9d5112274a1a013eec5907a8068 228 SUPERFAMILY SSF53167 1 227 1.14E-71 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VCLMA_RS11020 7f09c9d5112274a1a013eec5907a8068 228 Gene3D G3DSA:3.40.50.1580 1 227 1.4E-77 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VCLMA_RS11020 7f09c9d5112274a1a013eec5907a8068 228 PANTHER PTHR21234 1 227 8.2E-65 T 22-04-2016 IPR018017 Nucleoside phosphorylase VCLMA_RS11020 7f09c9d5112274a1a013eec5907a8068 228 Pfam PF01048 Phosphorylase superfamily 2 224 6.9E-49 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VCLMA_RS11020 7f09c9d5112274a1a013eec5907a8068 228 PANTHER PTHR21234:SF16 1 227 8.2E-65 T 22-04-2016 VCLMA_RS11020 7f09c9d5112274a1a013eec5907a8068 228 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 227 44.993 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 VCLMA_RS00965 54c19aa8170305a2032b8de8f3179070 261 Gene3D G3DSA:3.40.50.300 5 229 1.1E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00965 54c19aa8170305a2032b8de8f3179070 261 PANTHER PTHR24220:SF266 3 247 4.1E-121 T 22-04-2016 VCLMA_RS00965 54c19aa8170305a2032b8de8f3179070 261 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS00965 54c19aa8170305a2032b8de8f3179070 261 SUPERFAMILY SSF52540 4 232 4.33E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00965 54c19aa8170305a2032b8de8f3179070 261 SMART SM00382 26 214 5.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS00965 54c19aa8170305a2032b8de8f3179070 261 Pfam PF00005 ABC transporter 22 166 7.6E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS00965 54c19aa8170305a2032b8de8f3179070 261 PANTHER PTHR24220 3 247 4.1E-121 T 22-04-2016 VCLMA_RS09185 9d68ac4c7574be8ab67290382f44135d 147 Pfam PF01641 SelR domain 28 145 1.4E-51 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VCLMA_RS09185 9d68ac4c7574be8ab67290382f44135d 147 Gene3D G3DSA:2.170.150.20 18 146 7.6E-57 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VCLMA_RS09185 9d68ac4c7574be8ab67290382f44135d 147 PANTHER PTHR10173 23 147 4.1E-54 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VCLMA_RS09185 9d68ac4c7574be8ab67290382f44135d 147 SUPERFAMILY SSF51316 22 146 6.28E-55 T 22-04-2016 IPR011057 Mss4-like VCLMA_RS09185 9d68ac4c7574be8ab67290382f44135d 147 PANTHER PTHR10173:SF18 23 147 4.1E-54 T 22-04-2016 VCLMA_RS09185 9d68ac4c7574be8ab67290382f44135d 147 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 23 144 6.1E-54 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VCLMA_RS09185 9d68ac4c7574be8ab67290382f44135d 147 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 24 147 35.763 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VCLMA_RS11950 cae423dfade977d7452409931acfa429 206 PANTHER PTHR10516:SF320 86 205 1.1E-62 T 22-04-2016 VCLMA_RS11950 cae423dfade977d7452409931acfa429 206 PANTHER PTHR10516:SF320 19 44 1.1E-62 T 22-04-2016 VCLMA_RS11950 cae423dfade977d7452409931acfa429 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 8.4E-26 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VCLMA_RS11950 cae423dfade977d7452409931acfa429 206 SUPERFAMILY SSF54534 7 205 8.25E-55 T 22-04-2016 VCLMA_RS11950 cae423dfade977d7452409931acfa429 206 Gene3D G3DSA:1.10.287.460 2 92 9.6E-25 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VCLMA_RS11950 cae423dfade977d7452409931acfa429 206 PANTHER PTHR10516 86 205 1.1E-62 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VCLMA_RS11950 cae423dfade977d7452409931acfa429 206 PANTHER PTHR10516 19 44 1.1E-62 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VCLMA_RS11950 cae423dfade977d7452409931acfa429 206 Gene3D G3DSA:3.10.50.40 93 205 2.9E-42 T 22-04-2016 VCLMA_RS11950 cae423dfade977d7452409931acfa429 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 5.4E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 38.262 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 SUPERFAMILY SSF53335 7 113 1.49E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 SUPERFAMILY SSF53335 217 316 1.49E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 2.8E-119 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 Gene3D G3DSA:1.10.150.170 112 219 4.5E-35 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 PANTHER PTHR11265:SF0 1 316 2.1E-147 T 22-04-2016 VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 Gene3D G3DSA:3.40.50.150 220 316 7.5E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 Gene3D G3DSA:3.40.50.150 7 110 7.5E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 SUPERFAMILY SSF81799 113 216 7.19E-31 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 PANTHER PTHR11265 1 316 2.1E-147 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 PIRSF PIRSF004486 1 316 8.6E-101 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS11160 ffe15b344cf12531bc137189dc45cc61 316 Pfam PF01795 MraW methylase family 5 315 3.1E-110 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS04960 11df9c01bd9c3255f0fd0187d35f66d2 200 PANTHER PTHR30446 1 200 9.2E-114 T 22-04-2016 VCLMA_RS04960 11df9c01bd9c3255f0fd0187d35f66d2 200 Pfam PF02132 RecR protein 41 77 4.4E-15 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger VCLMA_RS04960 11df9c01bd9c3255f0fd0187d35f66d2 200 Gene3D G3DSA:3.40.50.140 135 171 5.7E-4 T 22-04-2016 IPR006171 Toprim domain VCLMA_RS04960 11df9c01bd9c3255f0fd0187d35f66d2 200 Pfam PF13662 Toprim domain 82 172 1.2E-23 T 22-04-2016 IPR006171 Toprim domain VCLMA_RS04960 11df9c01bd9c3255f0fd0187d35f66d2 200 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 100.707 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VCLMA_RS04960 11df9c01bd9c3255f0fd0187d35f66d2 200 PANTHER PTHR30446:SF0 1 200 9.2E-114 T 22-04-2016 VCLMA_RS04960 11df9c01bd9c3255f0fd0187d35f66d2 200 SMART SM00493 81 166 2.6E-18 T 22-04-2016 IPR006171 Toprim domain VCLMA_RS04960 11df9c01bd9c3255f0fd0187d35f66d2 200 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 8.3E-79 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VCLMA_RS04960 11df9c01bd9c3255f0fd0187d35f66d2 200 SUPERFAMILY SSF111304 2 199 7.72E-71 T 22-04-2016 IPR023627 Recombination protein RecR VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 SUPERFAMILY SSF52980 904 1190 8.04E-83 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Gene3D G3DSA:1.10.486.10 584 732 2.8E-49 T 22-04-2016 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 PANTHER PTHR11070 123 220 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 PANTHER PTHR11070 11 94 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 PANTHER PTHR11070 516 1185 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 PANTHER PTHR11070 301 489 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 12 1189 0.0 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Gene3D G3DSA:3.90.320.10 895 1193 6.8E-101 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 PANTHER PTHR11070:SF23 123 220 0.0 T 22-04-2016 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 PANTHER PTHR11070:SF23 11 94 0.0 T 22-04-2016 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 PANTHER PTHR11070:SF23 516 1185 0.0 T 22-04-2016 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 PANTHER PTHR11070:SF23 301 489 0.0 T 22-04-2016 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Pfam PF13361 UvrD-like helicase C-terminal domain 442 813 5.9E-15 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 9 1190 15.051 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Gene3D G3DSA:1.10.3170.10 160 349 6.8E-53 T 22-04-2016 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Gene3D G3DSA:3.40.50.300 451 581 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Gene3D G3DSA:3.40.50.300 733 887 1.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Gene3D G3DSA:3.40.50.300 16 87 7.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Gene3D G3DSA:3.40.50.300 352 450 7.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Gene3D G3DSA:3.40.50.300 125 155 7.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Pfam PF12705 PD-(D/E)XK nuclease superfamily 966 1174 5.9E-6 T 22-04-2016 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 438 6.3E-56 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 SUPERFAMILY SSF52540 123 207 2.43E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 SUPERFAMILY SSF52540 326 825 2.43E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10765 374f1aef2cb4ca3e5a6ab55e9cb5fef0 1208 SUPERFAMILY SSF52540 16 85 2.43E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 SMART SM00448 4 114 3.6E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.7E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 PANTHER PTHR26402 4 238 9.0E-153 T 22-04-2016 VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 Pfam PF00072 Response regulator receiver domain 6 113 6.8E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 Gene3D G3DSA:3.40.50.2300 2 129 5.6E-36 T 22-04-2016 VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 SUPERFAMILY SSF52172 2 129 2.56E-36 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 Gene3D G3DSA:1.10.10.10 135 233 3.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 SUPERFAMILY SSF46894 137 233 5.1E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 PANTHER PTHR26402:SF586 4 238 9.0E-153 T 22-04-2016 VCLMA_RS10975 6db84f19d701acac9fd18061db263758 238 SMART SM00862 156 232 2.4E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS07210 290a7b45a6b8206e77fd1c281009757d 236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 4.4E-37 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VCLMA_RS07210 290a7b45a6b8206e77fd1c281009757d 236 PANTHER PTHR23344:SF20 4 236 1.1E-71 T 22-04-2016 VCLMA_RS07210 290a7b45a6b8206e77fd1c281009757d 236 PANTHER PTHR23344 4 236 1.1E-71 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 VCLMA_RS07210 290a7b45a6b8206e77fd1c281009757d 236 SUPERFAMILY SSF51695 4 235 5.44E-68 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VCLMA_RS07210 290a7b45a6b8206e77fd1c281009757d 236 Gene3D G3DSA:3.20.20.190 4 234 3.7E-66 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 VCLMA_RS02910 6ff712755769b71a03a41aa06eb7ecb6 244 PANTHER PTHR30545:SF2 1 232 1.2E-90 T 22-04-2016 VCLMA_RS02910 6ff712755769b71a03a41aa06eb7ecb6 244 Pfam PF03749 Sugar fermentation stimulation protein 13 230 2.7E-76 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein VCLMA_RS02910 6ff712755769b71a03a41aa06eb7ecb6 244 PANTHER PTHR30545 1 232 1.2E-90 T 22-04-2016 VCLMA_RS02910 6ff712755769b71a03a41aa06eb7ecb6 244 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 229 1.7E-77 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein VCLMA_RS02910 6ff712755769b71a03a41aa06eb7ecb6 244 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 239 56.842 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 Gene3D G3DSA:3.30.470.20 191 328 1.1E-64 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 SUPERFAMILY SSF56059 104 323 5.83E-68 T 22-04-2016 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.928 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 Gene3D G3DSA:3.30.1490.20 121 190 6.5E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.4E-186 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 5.7E-30 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.7E-82 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 7.2E-36 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 SMART SM01210 330 423 2.1E-56 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 SUPERFAMILY SSF52440 1 103 7.05E-38 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 SUPERFAMILY SSF51246 329 424 1.1E-33 T 22-04-2016 IPR011054 Rudiment single hybrid motif VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 Gene3D G3DSA:3.90.600.10 330 423 3.8E-36 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 SMART SM01209 103 296 8.3E-140 T 22-04-2016 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 PANTHER PTHR10520 1 426 5.7E-298 T 22-04-2016 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS01325 73764d2bc2db9028cc244e81594055bf 429 Gene3D G3DSA:3.40.50.20 2 95 2.8E-39 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 PANTHER PTHR19384:SF77 141 172 6.7E-110 T 22-04-2016 VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 PANTHER PTHR19384:SF77 1 120 6.7E-110 T 22-04-2016 VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 Gene3D G3DSA:3.40.50.360 1 169 1.4E-64 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 6.6E-74 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 Pfam PF00258 Flavodoxin 6 160 3.1E-33 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 SUPERFAMILY SSF52218 4 171 3.57E-53 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 PIRSF PIRSF038996 1 172 6.5E-69 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 PANTHER PTHR19384 141 172 6.7E-110 T 22-04-2016 VCLMA_RS09680 86d0cdd279a2389871f31c2a8c400d46 175 PANTHER PTHR19384 1 120 6.7E-110 T 22-04-2016 VCLMA_RS02815 4adf52355a0c5a844cc1eff5419ae576 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 122 194 2.5E-6 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal VCLMA_RS02815 4adf52355a0c5a844cc1eff5419ae576 211 SUPERFAMILY SSF52833 11 110 5.91E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS02815 4adf52355a0c5a844cc1eff5419ae576 211 SUPERFAMILY SSF47616 82 208 1.56E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VCLMA_RS02815 4adf52355a0c5a844cc1eff5419ae576 211 Gene3D G3DSA:3.40.30.10 7 100 2.0E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS02815 4adf52355a0c5a844cc1eff5419ae576 211 PANTHER PTHR11260:SF44 9 208 5.3E-121 T 22-04-2016 VCLMA_RS02815 4adf52355a0c5a844cc1eff5419ae576 211 PANTHER PTHR11260 9 208 5.3E-121 T 22-04-2016 VCLMA_RS02815 4adf52355a0c5a844cc1eff5419ae576 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.5E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VCLMA_RS02815 4adf52355a0c5a844cc1eff5419ae576 211 Gene3D G3DSA:1.20.1050.10 101 208 4.4E-15 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Gene3D G3DSA:3.10.290.10 102 190 6.5E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 2.1E-30 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 SMART SM00363 96 160 9.7E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Pfam PF01479 S4 domain 97 143 4.7E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 SUPERFAMILY SSF55174 3 206 3.01E-72 T 22-04-2016 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 SMART SM01390 3 95 6.9E-50 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 PANTHER PTHR11831 1 206 2.1E-94 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Gene3D G3DSA:1.10.1050.10 1 101 5.7E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 9.7E-85 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.307 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VCLMA_RS11970 ddd9d33938bcaa5c5ce2de7f4f72c56e 206 PANTHER PTHR11831:SF4 1 206 2.1E-94 T 22-04-2016 VCLMA_RS05990 a23dafdd2fe8d73f8818c05ab55e36f9 218 PANTHER PTHR11935 1 215 7.1E-128 T 22-04-2016 VCLMA_RS05990 a23dafdd2fe8d73f8818c05ab55e36f9 218 SMART SM00849 14 195 9.9E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS05990 a23dafdd2fe8d73f8818c05ab55e36f9 218 PANTHER PTHR11935:SF115 1 215 7.1E-128 T 22-04-2016 VCLMA_RS05990 a23dafdd2fe8d73f8818c05ab55e36f9 218 Gene3D G3DSA:3.60.15.10 3 213 2.1E-58 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS05990 a23dafdd2fe8d73f8818c05ab55e36f9 218 SUPERFAMILY SSF56281 4 211 7.72E-56 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS05990 a23dafdd2fe8d73f8818c05ab55e36f9 218 Pfam PF00753 Metallo-beta-lactamase superfamily 12 195 6.9E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 2.7E-70 T 22-04-2016 VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 Gene3D G3DSA:3.40.50.720 2 243 3.3E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PANTHER PTHR24322:SF635 151 183 2.9E-78 T 22-04-2016 VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PANTHER PTHR24322:SF635 10 135 2.9E-78 T 22-04-2016 VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.2E-102 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PANTHER PTHR24322 151 183 2.9E-78 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PANTHER PTHR24322 10 135 2.9E-78 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 SUPERFAMILY SSF51735 4 243 5.32E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 215 2.3E-5 T 22-04-2016 VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 6.9E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.9E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.9E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 8.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 8.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 8.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 8.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 8.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09295 da51e936f73fb6d6d48d57e27e441dd1 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 8.3E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS08285 2235bedf42f0071d749a164ccef940e8 142 Pfam PF10980 Protein of unknown function (DUF2787) 14 139 7.5E-38 T 22-04-2016 IPR021248 Protein of unknown function DUF2787 VCLMA_RS08285 2235bedf42f0071d749a164ccef940e8 142 PANTHER PTHR38978 1 141 8.4E-69 T 22-04-2016 VCLMA_RS08285 2235bedf42f0071d749a164ccef940e8 142 PANTHER PTHR38978:SF1 1 141 8.4E-69 T 22-04-2016 VCLMA_RS06010 36c63870540960ec822ec645e5193aa5 177 PANTHER PTHR35011:SF4 1 177 1.1E-114 T 22-04-2016 VCLMA_RS06010 36c63870540960ec822ec645e5193aa5 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 161 1.0E-27 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VCLMA_RS06010 36c63870540960ec822ec645e5193aa5 177 PANTHER PTHR35011 1 177 1.1E-114 T 22-04-2016 VCLMA_RS12605 d6b9f4abbf91ee79334914d89f5b4238 223 PANTHER PTHR34300 1 223 2.8E-136 T 22-04-2016 VCLMA_RS12605 d6b9f4abbf91ee79334914d89f5b4238 223 Pfam PF02592 Putative vitamin uptake transporter 43 199 5.7E-38 T 22-04-2016 IPR003744 Protein of unknown function DUF165 VCLMA_RS12605 d6b9f4abbf91ee79334914d89f5b4238 223 PANTHER PTHR34300:SF1 1 223 2.8E-136 T 22-04-2016 VCLMA_RS12605 d6b9f4abbf91ee79334914d89f5b4238 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 15 204 3.6E-62 T 22-04-2016 IPR003744 Protein of unknown function DUF165 VCLMA_RS07585 c21bc397d9ec213e751f559e1337da9a 478 PANTHER PTHR10366 3 243 2.4E-152 T 22-04-2016 VCLMA_RS07585 c21bc397d9ec213e751f559e1337da9a 478 PANTHER PTHR10366 261 320 2.4E-152 T 22-04-2016 VCLMA_RS07585 c21bc397d9ec213e751f559e1337da9a 478 SUPERFAMILY SSF51735 1 295 1.33E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS07585 c21bc397d9ec213e751f559e1337da9a 478 PANTHER PTHR10366:SF401 3 243 2.4E-152 T 22-04-2016 VCLMA_RS07585 c21bc397d9ec213e751f559e1337da9a 478 PANTHER PTHR10366:SF401 261 320 2.4E-152 T 22-04-2016 VCLMA_RS07585 c21bc397d9ec213e751f559e1337da9a 478 Pfam PF11066 Protein of unknown function (DUF2867) 337 467 5.6E-14 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 VCLMA_RS07585 c21bc397d9ec213e751f559e1337da9a 478 Pfam PF13460 NAD(P)H-binding 8 151 1.1E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS07585 c21bc397d9ec213e751f559e1337da9a 478 Gene3D G3DSA:3.40.50.720 1 224 1.8E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 Gene3D G3DSA:3.40.190.10 199 268 4.3E-14 T 22-04-2016 VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 PANTHER PTHR30346 3 301 3.9E-232 T 22-04-2016 VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 PANTHER PTHR30346:SF10 3 301 3.9E-232 T 22-04-2016 VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 Gene3D G3DSA:3.40.190.10 96 198 1.6E-25 T 22-04-2016 VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.878188E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.878188E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.878188E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 SUPERFAMILY SSF53850 96 300 1.94E-36 T 22-04-2016 VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 SUPERFAMILY SSF46785 4 117 2.62E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 Pfam PF03466 LysR substrate binding domain 96 299 6.6E-39 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 1.6E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS03565 ad7cdc481749b637792029cf66591090 301 Gene3D G3DSA:1.10.10.10 6 84 6.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS05265 98238300c50cd0afcc79e9981a2215fa 425 Pfam PF01593 Flavin containing amine oxidoreductase 10 302 6.4E-20 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 VCLMA_RS05265 98238300c50cd0afcc79e9981a2215fa 425 SUPERFAMILY SSF51905 382 412 5.61E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS05265 98238300c50cd0afcc79e9981a2215fa 425 SUPERFAMILY SSF51905 1 299 5.61E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS05265 98238300c50cd0afcc79e9981a2215fa 425 Gene3D G3DSA:3.50.50.60 1 110 1.8E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS05265 98238300c50cd0afcc79e9981a2215fa 425 Gene3D G3DSA:3.50.50.60 200 301 1.8E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS05265 98238300c50cd0afcc79e9981a2215fa 425 PANTHER PTHR10742 1 421 5.5E-264 T 22-04-2016 VCLMA_RS05265 98238300c50cd0afcc79e9981a2215fa 425 PANTHER PTHR10742:SF275 1 421 5.5E-264 T 22-04-2016 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 PANTHER PTHR11669 1 445 3.4E-181 T 22-04-2016 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 478 549 4.3E-20 T 22-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 SUPERFAMILY SSF48019 243 361 2.98E-32 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 SUPERFAMILY SSF52540 32 222 2.44E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 Gene3D G3DSA:3.40.50.300 15 166 1.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 Gene3D G3DSA:1.10.8.60 167 242 4.3E-31 T 22-04-2016 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 PANTHER PTHR11669:SF0 1 445 3.4E-181 T 22-04-2016 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 Gene3D G3DSA:1.20.272.10 243 360 6.2E-45 T 22-04-2016 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 SMART SM00382 37 179 1.5E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 358 4.6E-31 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 Pfam PF13177 DNA polymerase III, delta subunit 20 178 7.2E-44 T 22-04-2016 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 6.1E-131 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VCLMA_RS04950 0ec95302c0c72a060c674c445edc32a5 692 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 551 689 4.8E-49 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS09875 375765a73f4a5eb984623802d3700f24 153 Gene3D G3DSA:3.30.160.170 56 140 2.1E-25 T 22-04-2016 IPR005186 FlaG protein VCLMA_RS09875 375765a73f4a5eb984623802d3700f24 153 PANTHER PTHR37166 18 153 4.3E-36 T 22-04-2016 VCLMA_RS09875 375765a73f4a5eb984623802d3700f24 153 PANTHER PTHR37166:SF1 18 153 4.3E-36 T 22-04-2016 VCLMA_RS09875 375765a73f4a5eb984623802d3700f24 153 Pfam PF03646 FlaG protein 52 150 2.3E-25 T 22-04-2016 IPR005186 FlaG protein VCLMA_RS09875 375765a73f4a5eb984623802d3700f24 153 SUPERFAMILY SSF160214 57 150 2.62E-23 T 22-04-2016 IPR005186 FlaG protein VCLMA_RS12360 ee738c57c23295f472bd4570f92be32b 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 30 40 5.0E-5 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VCLMA_RS12360 ee738c57c23295f472bd4570f92be32b 324 PRINTS PR00982 Lysyl-tRNA synthetase signature 98 115 5.0E-5 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 VCLMA_RS12360 ee738c57c23295f472bd4570f92be32b 324 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 1 324 53.411 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VCLMA_RS12360 ee738c57c23295f472bd4570f92be32b 324 Gene3D G3DSA:3.30.930.10 13 320 7.0E-71 T 22-04-2016 VCLMA_RS12360 ee738c57c23295f472bd4570f92be32b 324 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 15 319 6.9E-128 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VCLMA_RS12360 ee738c57c23295f472bd4570f92be32b 324 PANTHER PTHR22594:SF7 7 323 1.8E-148 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VCLMA_RS12360 ee738c57c23295f472bd4570f92be32b 324 PANTHER PTHR22594 7 323 1.8E-148 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS12360 ee738c57c23295f472bd4570f92be32b 324 Pfam PF00152 tRNA synthetases class II (D, K and N) 13 320 8.1E-44 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS12360 ee738c57c23295f472bd4570f92be32b 324 SUPERFAMILY SSF55681 10 322 8.96E-83 T 22-04-2016 VCLMA_RS05185 de71e4b9bb5cf1de8507d5d442ce5313 264 Pfam PF00005 ABC transporter 22 177 8.8E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS05185 de71e4b9bb5cf1de8507d5d442ce5313 264 SMART SM00382 31 226 9.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS05185 de71e4b9bb5cf1de8507d5d442ce5313 264 SUPERFAMILY SSF52540 2 235 7.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05185 de71e4b9bb5cf1de8507d5d442ce5313 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS05185 de71e4b9bb5cf1de8507d5d442ce5313 264 PANTHER PTHR24220:SF534 3 251 3.8E-138 T 22-04-2016 VCLMA_RS05185 de71e4b9bb5cf1de8507d5d442ce5313 264 Gene3D G3DSA:3.40.50.300 1 235 1.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05185 de71e4b9bb5cf1de8507d5d442ce5313 264 PANTHER PTHR24220 3 251 3.8E-138 T 22-04-2016 VCLMA_RS03185 c7f1d94dd141e906482c879a30058029 337 PANTHER PTHR30217:SF3 246 336 7.0E-219 T 22-04-2016 VCLMA_RS03185 c7f1d94dd141e906482c879a30058029 337 PANTHER PTHR30217:SF3 1 220 7.0E-219 T 22-04-2016 VCLMA_RS03185 c7f1d94dd141e906482c879a30058029 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS03185 c7f1d94dd141e906482c879a30058029 337 Pfam PF01136 Peptidase family U32 75 336 7.2E-72 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS03185 c7f1d94dd141e906482c879a30058029 337 PANTHER PTHR30217 246 336 7.0E-219 T 22-04-2016 VCLMA_RS03185 c7f1d94dd141e906482c879a30058029 337 PANTHER PTHR30217 1 220 7.0E-219 T 22-04-2016 VCLMA_RS11110 e98577884d4619d068a09f4e6a1f6cad 260 PANTHER PTHR35851:SF1 5 260 2.3E-75 T 22-04-2016 VCLMA_RS11110 e98577884d4619d068a09f4e6a1f6cad 260 PANTHER PTHR35851 5 260 2.3E-75 T 22-04-2016 VCLMA_RS11110 e98577884d4619d068a09f4e6a1f6cad 260 Pfam PF03799 Cell division protein FtsQ 126 238 1.8E-25 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB VCLMA_RS11110 e98577884d4619d068a09f4e6a1f6cad 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 22 246 23.478 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 VCLMA_RS11110 e98577884d4619d068a09f4e6a1f6cad 260 Pfam PF08478 POTRA domain, FtsQ-type 53 122 1.2E-16 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 PANTHER PTHR30050 1 104 9.9E-246 T 22-04-2016 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 Gene3D G3DSA:1.10.1750.10 366 466 8.0E-43 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 466 34.634 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 Gene3D G3DSA:1.10.8.60 298 365 9.2E-32 T 22-04-2016 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 SMART SM00382 164 377 4.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 PANTHER PTHR30050:SF2 130 467 9.9E-246 T 22-04-2016 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 376 444 1.8E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 PANTHER PTHR30050 130 467 9.9E-246 T 22-04-2016 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 SMART SM00760 375 444 3.4E-45 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 Pfam PF11638 DnaA N-terminal domain 4 64 1.5E-18 T 22-04-2016 IPR024633 DnaA N-terminal domain VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 ProSitePatterns PS01008 DnaA protein signature. 425 444 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 290 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 425 444 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 197 211 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 229 243 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 165 185 1.7E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 SUPERFAMILY SSF48295 363 466 3.66E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 465 9.9E-187 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 Gene3D G3DSA:3.40.50.300 122 296 1.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 SUPERFAMILY SSF52540 132 343 7.91E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 PANTHER PTHR30050:SF2 1 104 9.9E-246 T 22-04-2016 VCLMA_RS00055 96ed21b4138cea19a3bfa4d4a3cc57c7 467 Pfam PF00308 Bacterial dnaA protein 133 349 2.5E-98 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 SUPERFAMILY SSF63829 388 577 3.14E-14 T 22-04-2016 VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 Pfam PF00990 Diguanylate cyclase, GGDEF domain 809 962 3.1E-33 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 SUPERFAMILY SSF63829 130 222 1.2E-5 T 22-04-2016 VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 SUPERFAMILY SSF63829 34 85 1.2E-5 T 22-04-2016 VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 PANTHER PTHR10799 840 969 4.7E-17 T 22-04-2016 VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 PANTHER PTHR10799 634 783 4.7E-17 T 22-04-2016 VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 PANTHER PTHR10799:SF710 840 969 4.7E-17 T 22-04-2016 VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 PANTHER PTHR10799:SF710 634 783 4.7E-17 T 22-04-2016 VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 804 965 8.3E-36 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 Gene3D G3DSA:2.120.10.30 387 575 2.5E-10 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 SMART SM00267 796 966 1.3E-31 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 SUPERFAMILY SSF55073 812 964 3.53E-39 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 Pfam PF07494 Two component regulator propeller 418 441 1.8E-4 T 22-04-2016 IPR011110 Two component regulator propeller VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 Pfam PF07494 Two component regulator propeller 46 68 5.1E-5 T 22-04-2016 IPR011110 Two component regulator propeller VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 Pfam PF07494 Two component regulator propeller 462 482 0.0069 T 22-04-2016 IPR011110 Two component regulator propeller VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 Pfam PF07495 Y_Y_Y domain 683 745 7.1E-18 T 22-04-2016 IPR011123 Two component regulator three Y VCLMA_RS06390 73d5f534ac8e0d3721da03d72cb6e53c 976 Gene3D G3DSA:3.30.70.270 810 965 4.4E-43 T 22-04-2016 VCLMA_RS02525 25b96ed2b9f77877a7ce6909b2e03853 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 2.0E-32 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02525 25b96ed2b9f77877a7ce6909b2e03853 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 7.1E-37 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02525 25b96ed2b9f77877a7ce6909b2e03853 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 6.6E-30 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02525 25b96ed2b9f77877a7ce6909b2e03853 117 Gene3D G3DSA:3.30.1130.10 1 116 2.1E-43 T 22-04-2016 VCLMA_RS02525 25b96ed2b9f77877a7ce6909b2e03853 117 PANTHER PTHR20941 1 116 2.5E-37 T 22-04-2016 VCLMA_RS02525 25b96ed2b9f77877a7ce6909b2e03853 117 SUPERFAMILY SSF55620 1 116 2.39E-37 T 22-04-2016 VCLMA_RS02525 25b96ed2b9f77877a7ce6909b2e03853 117 SMART SM00905 4 114 2.0E-49 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02110 a16bd88794f3cb1a25c24d65a56dec8d 166 Gene3D G3DSA:3.90.950.10 1 166 1.1E-60 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VCLMA_RS02110 a16bd88794f3cb1a25c24d65a56dec8d 166 Hamap MF_00528 Septum formation protein Maf [maf]. 1 166 21.867 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VCLMA_RS02110 a16bd88794f3cb1a25c24d65a56dec8d 166 Pfam PF02545 Maf-like protein 2 165 7.0E-51 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VCLMA_RS02110 a16bd88794f3cb1a25c24d65a56dec8d 166 SUPERFAMILY SSF52972 2 165 1.77E-52 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VCLMA_RS02110 a16bd88794f3cb1a25c24d65a56dec8d 166 PANTHER PTHR11746 100 163 6.8E-16 T 22-04-2016 VCLMA_RS02110 a16bd88794f3cb1a25c24d65a56dec8d 166 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 163 5.0E-47 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VCLMA_RS02110 a16bd88794f3cb1a25c24d65a56dec8d 166 PIRSF PIRSF006305 1 166 3.1E-46 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VCLMA_RS06055 4a9be26d5e260587a6d414d2d5d14fb8 111 PIRSF PIRSF000699 1 105 4.2E-40 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS06055 4a9be26d5e260587a6d414d2d5d14fb8 111 SUPERFAMILY SSF46973 2 98 2.88E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS06055 4a9be26d5e260587a6d414d2d5d14fb8 111 PANTHER PTHR34382 1 106 1.2E-51 T 22-04-2016 VCLMA_RS06055 4a9be26d5e260587a6d414d2d5d14fb8 111 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 8.6E-35 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS06055 4a9be26d5e260587a6d414d2d5d14fb8 111 PANTHER PTHR34382:SF2 1 106 1.2E-51 T 22-04-2016 VCLMA_RS06055 4a9be26d5e260587a6d414d2d5d14fb8 111 Gene3D G3DSA:1.20.58.80 2 100 7.3E-39 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS07465 eb7cf1ef2375c0d7aafc7b4a53959472 472 PANTHER PTHR30026 6 472 5.9E-245 T 22-04-2016 VCLMA_RS07465 eb7cf1ef2375c0d7aafc7b4a53959472 472 PANTHER PTHR30026:SF5 6 472 5.9E-245 T 22-04-2016 VCLMA_RS07465 eb7cf1ef2375c0d7aafc7b4a53959472 472 Pfam PF02321 Outer membrane efflux protein 26 243 4.8E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VCLMA_RS07465 eb7cf1ef2375c0d7aafc7b4a53959472 472 Pfam PF02321 Outer membrane efflux protein 265 445 2.1E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VCLMA_RS07465 eb7cf1ef2375c0d7aafc7b4a53959472 472 SUPERFAMILY SSF56954 106 445 3.92E-66 T 22-04-2016 VCLMA_RS07465 eb7cf1ef2375c0d7aafc7b4a53959472 472 SUPERFAMILY SSF56954 2 77 3.92E-66 T 22-04-2016 VCLMA_RS07465 eb7cf1ef2375c0d7aafc7b4a53959472 472 Gene3D G3DSA:1.20.1600.10 21 444 8.1E-51 T 22-04-2016 VCLMA_RS06465 a966a6a4779f4d36febf54f6bbc88712 338 Gene3D G3DSA:3.40.190.10 125 205 8.8E-10 T 22-04-2016 VCLMA_RS06465 a966a6a4779f4d36febf54f6bbc88712 338 Pfam PF09084 NMT1/THI5 like 53 261 4.7E-21 T 22-04-2016 IPR015168 SsuA/THI5-like VCLMA_RS06465 a966a6a4779f4d36febf54f6bbc88712 338 PANTHER PTHR30024 4 325 5.9E-70 T 22-04-2016 VCLMA_RS06465 a966a6a4779f4d36febf54f6bbc88712 338 PANTHER PTHR30024:SF1 4 325 5.9E-70 T 22-04-2016 VCLMA_RS06465 a966a6a4779f4d36febf54f6bbc88712 338 SUPERFAMILY SSF53850 42 262 5.44E-31 T 22-04-2016 VCLMA_RS08685 c61ca96e9f95f529f0fde1aeaa2c05b5 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 49.232 T 22-04-2016 IPR022987 Uncharacterised protein family UPF0227 VCLMA_RS08685 c61ca96e9f95f529f0fde1aeaa2c05b5 179 PANTHER PTHR35602 1 177 1.0E-135 T 22-04-2016 VCLMA_RS08685 c61ca96e9f95f529f0fde1aeaa2c05b5 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 8.9E-73 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VCLMA_RS08685 c61ca96e9f95f529f0fde1aeaa2c05b5 179 PANTHER PTHR35602:SF2 1 177 1.0E-135 T 22-04-2016 VCLMA_RS08685 c61ca96e9f95f529f0fde1aeaa2c05b5 179 Gene3D G3DSA:3.40.50.1820 2 172 7.8E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS08685 c61ca96e9f95f529f0fde1aeaa2c05b5 179 SUPERFAMILY SSF53474 2 171 1.46E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS08855 a6e250b0d282b27ec5635a7be901187c 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 1.1E-85 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VCLMA_RS08855 a6e250b0d282b27ec5635a7be901187c 453 PANTHER PTHR33362:SF6 1 451 1.1E-249 T 22-04-2016 VCLMA_RS08855 a6e250b0d282b27ec5635a7be901187c 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 4.3E-115 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VCLMA_RS08855 a6e250b0d282b27ec5635a7be901187c 453 PANTHER PTHR33362 1 451 1.1E-249 T 22-04-2016 VCLMA_RS08855 a6e250b0d282b27ec5635a7be901187c 453 PIRSF PIRSF006066 1 447 1.0E-136 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VCLMA_RS01665 1eb8091ab9c7906801f5f7b4be6ee36c 284 PANTHER PTHR10067 4 279 1.3E-118 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VCLMA_RS01665 1eb8091ab9c7906801f5f7b4be6ee36c 284 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 282 5.3E-88 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VCLMA_RS01665 1eb8091ab9c7906801f5f7b4be6ee36c 284 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 284 48.317 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VCLMA_RS01665 1eb8091ab9c7906801f5f7b4be6ee36c 284 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 1.5E-60 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 218 230 2.8E-12 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 61 76 2.8E-12 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 2.8E-12 T 22-04-2016 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 71 76 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 Pfam PF00089 Trypsin 33 268 1.0E-51 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 524 545 0.0018 T 22-04-2016 IPR020008 GlyGly-CTERM domain VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 SMART SM00020 32 268 3.9E-65 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 PANTHER PTHR24276 1 495 2.4E-283 T 22-04-2016 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 219 230 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 PANTHER PTHR24276:SF55 1 495 2.4E-283 T 22-04-2016 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 SUPERFAMILY SSF50494 27 270 3.89E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 Gene3D G3DSA:2.40.10.10 33 68 1.5E-16 T 22-04-2016 VCLMA_RS07670 56780e0a6e964e90a7af63255ebdeb2b 548 Gene3D G3DSA:2.40.10.10 69 270 4.4E-45 T 22-04-2016 VCLMA_RS07820 69c928c8963bc6ce33281bab945c1334 222 PANTHER PTHR31088 2 221 1.9E-121 T 22-04-2016 VCLMA_RS07820 69c928c8963bc6ce33281bab945c1334 222 PANTHER PTHR31088:SF7 2 221 1.9E-121 T 22-04-2016 VCLMA_RS07820 69c928c8963bc6ce33281bab945c1334 222 Pfam PF04012 PspA/IM30 family 2 218 4.0E-65 T 22-04-2016 IPR007157 PspA/IM30 VCLMA_RS07820 69c928c8963bc6ce33281bab945c1334 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.4E-95 T 22-04-2016 IPR014319 Phage shock protein, PspA VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 SUPERFAMILY SSF116726 372 442 4.58E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 SUPERFAMILY SSF56176 458 528 6.27E-7 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 Pfam PF02080 TrkA-C domain 375 442 1.2E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 PANTHER PTHR32507:SF7 1 533 3.7E-275 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 SMART SM01091 451 530 2.7E-8 T 22-04-2016 IPR005170 Transporter-associated domain VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 Gene3D G3DSA:3.30.465.10 458 527 1.7E-7 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 Gene3D G3DSA:3.30.70.1450 380 443 7.7E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 PANTHER PTHR32507 1 533 3.7E-275 T 22-04-2016 VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 Pfam PF00999 Sodium/hydrogen exchanger family 16 344 1.4E-50 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 533 46.982 T 22-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 VCLMA_RS12590 bcde482992c8dda727987335296c66b0 539 Pfam PF03471 Transporter associated domain 455 528 9.1E-6 T 22-04-2016 IPR005170 Transporter-associated domain VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 Gene3D G3DSA:2.40.10.170 2 75 1.2E-29 T 22-04-2016 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 1.1E-247 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 PANTHER PTHR15184 1 467 0.0 T 22-04-2016 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 Gene3D G3DSA:3.40.50.300 76 350 3.9E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 2.6E-19 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 Gene3D G3DSA:1.10.1140.10 352 467 3.2E-50 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 2.1E-61 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 SUPERFAMILY SSF50615 1 75 1.65E-24 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 SMART SM00382 142 334 2.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 PANTHER PTHR15184:SF44 1 467 0.0 T 22-04-2016 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 SUPERFAMILY SSF52540 77 355 5.14E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 56.022 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12945 77aa030dbc164bf7358215078a97c897 467 SUPERFAMILY SSF47917 352 466 2.51E-50 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS05275 6adbbe4b8175be4663c6b68e4d94c292 413 PIRSF PIRSF003085 18 413 3.7E-124 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VCLMA_RS05275 6adbbe4b8175be4663c6b68e4d94c292 413 SUPERFAMILY SSF53335 43 366 1.4E-87 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05275 6adbbe4b8175be4663c6b68e4d94c292 413 Pfam PF02353 Mycolic acid cyclopropane synthetase 138 406 3.1E-84 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05275 6adbbe4b8175be4663c6b68e4d94c292 413 Gene3D G3DSA:3.40.50.150 134 411 1.1E-99 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05275 6adbbe4b8175be4663c6b68e4d94c292 413 PANTHER PTHR10108:SF805 347 412 1.2E-139 T 22-04-2016 VCLMA_RS05275 6adbbe4b8175be4663c6b68e4d94c292 413 PANTHER PTHR10108:SF805 68 326 1.2E-139 T 22-04-2016 VCLMA_RS05275 6adbbe4b8175be4663c6b68e4d94c292 413 PANTHER PTHR10108 347 412 1.2E-139 T 22-04-2016 VCLMA_RS05275 6adbbe4b8175be4663c6b68e4d94c292 413 PANTHER PTHR10108 68 326 1.2E-139 T 22-04-2016 VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 PANTHER PTHR12725:SF63 1 200 1.1E-49 T 22-04-2016 VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 184 1.0E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 Pfam PF13419 Haloacid dehalogenase-like hydrolase 84 183 6.3E-10 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 2.7E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 2.7E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 2.7E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.7E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 2.7E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 SUPERFAMILY SSF56784 4 192 2.5E-33 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 Gene3D G3DSA:3.40.50.1000 1 197 9.1E-36 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS07655 32e73bb01013370cb926081203f9083a 202 PANTHER PTHR12725 1 200 1.1E-49 T 22-04-2016 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 PANTHER PTHR22976 4 350 2.1E-179 T 22-04-2016 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.761 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 PIRSF PIRSF001619 1 318 3.3E-137 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 SUPERFAMILY SSF102114 5 310 1.7E-92 T 22-04-2016 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 PANTHER PTHR22976:SF1 4 350 2.1E-179 T 22-04-2016 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 Pfam PF04055 Radical SAM superfamily 50 200 1.8E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 Gene3D G3DSA:3.20.20.70 5 312 3.5E-104 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 SMART SM00729 43 255 2.3E-37 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 2.6E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 6.4E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS05225 8bd699096fc37bf614f5fbe01b77183d 350 SMART SM00876 220 312 2.3E-46 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS12965 02df1f056175c2b814a8d4d57dc4b551 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 3.6E-36 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VCLMA_RS12965 02df1f056175c2b814a8d4d57dc4b551 156 PANTHER PTHR33445 1 156 3.5E-48 T 22-04-2016 VCLMA_RS12965 02df1f056175c2b814a8d4d57dc4b551 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.201 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VCLMA_RS12965 02df1f056175c2b814a8d4d57dc4b551 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.5E-59 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 VCLMA_RS12965 02df1f056175c2b814a8d4d57dc4b551 156 Gene3D G3DSA:1.20.5.620 63 122 9.9E-25 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VCLMA_RS12965 02df1f056175c2b814a8d4d57dc4b551 156 SUPERFAMILY SSF81573 63 121 8.89E-15 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain VCLMA_RS02150 c265a47ffd1f0c672d220594c50e437a 127 Pfam PF09834 Predicted membrane protein (DUF2061) 66 116 8.9E-22 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VCLMA_RS02150 c265a47ffd1f0c672d220594c50e437a 127 Pfam PF09834 Predicted membrane protein (DUF2061) 1 51 4.7E-20 T 22-04-2016 IPR018638 Domain of unknown function DUF2061, membrane VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 186 350 3.0E-63 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 SUPERFAMILY SSF54197 181 350 5.61E-54 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 Gene3D G3DSA:3.30.428.10 46 177 7.6E-56 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 350 9.8E-184 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 SUPERFAMILY SSF54197 6 179 5.42E-71 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 PANTHER PTHR11943 1 354 2.5E-213 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 Gene3D G3DSA:3.30.428.10 178 350 1.3E-74 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.8E-65 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 PIRSF PIRSF000808 2 345 1.4E-121 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 PANTHER PTHR11943:SF2 1 354 2.5E-213 T 22-04-2016 VCLMA_RS07400 cf15d2b2d4abc7b137900f6c625fe8bd 354 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 22-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS08495 ba061966d4fbaf10b879a0575edc2d58 120 PANTHER PTHR33747 1 120 1.0E-22 T 22-04-2016 VCLMA_RS08495 ba061966d4fbaf10b879a0575edc2d58 120 SUPERFAMILY SSF54427 1 95 9.64E-27 T 22-04-2016 IPR032710 NTF2-like domain VCLMA_RS08495 ba061966d4fbaf10b879a0575edc2d58 120 PANTHER PTHR33747:SF1 1 120 1.0E-22 T 22-04-2016 VCLMA_RS08495 ba061966d4fbaf10b879a0575edc2d58 120 Gene3D G3DSA:3.10.450.50 1 120 1.2E-38 T 22-04-2016 IPR032710 NTF2-like domain VCLMA_RS08495 ba061966d4fbaf10b879a0575edc2d58 120 Pfam PF02810 SEC-C motif 103 120 1.9E-8 T 22-04-2016 IPR004027 SEC-C motif VCLMA_RS08495 ba061966d4fbaf10b879a0575edc2d58 120 SUPERFAMILY SSF103642 100 120 3.43E-7 T 22-04-2016 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 PIRSF PIRSF039144 1 112 1.4E-58 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 SUPERFAMILY SSF54913 1 112 2.73E-47 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 2 17 2.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 52 75 2.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 83 103 2.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 PRINTS PR00340 P-II protein signature 23 41 2.1E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 SMART SM00938 4 105 6.4E-70 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 PANTHER PTHR30115 1 112 1.0E-68 T 22-04-2016 VCLMA_RS10395 ac02f148f6674d262df96da462f531fa 112 Gene3D G3DSA:3.30.70.120 1 112 3.8E-52 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Pfam PF05190 MutS family domain IV 435 525 2.7E-29 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Pfam PF00488 MutS domain V 617 804 1.9E-86 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 15 854 25.352 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 SUPERFAMILY SSF55271 8 123 6.54E-43 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 SMART SM00533 291 598 1.4E-109 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Pfam PF05192 MutS domain III 277 566 9.6E-41 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Gene3D G3DSA:1.10.1420.10 272 475 2.8E-57 T 22-04-2016 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 PANTHER PTHR11361 3 857 0.0 T 22-04-2016 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Pfam PF01624 MutS domain I 16 127 1.2E-41 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Pfam PF05188 MutS domain II 136 261 4.5E-33 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 695 711 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Gene3D G3DSA:3.40.50.300 574 804 2.4E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 SUPERFAMILY SSF53150 122 274 3.66E-41 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 PANTHER PTHR11361:SF86 3 857 0.0 T 22-04-2016 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 SMART SM00534 614 801 1.3E-119 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Gene3D G3DSA:3.30.420.110 135 263 2.2E-41 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 Gene3D G3DSA:3.40.1170.10 7 128 1.0E-51 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 PIRSF PIRSF037677 7 830 2.1E-159 T 22-04-2016 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 SUPERFAMILY SSF48334 275 571 6.54E-93 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 15 860 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 VCLMA_RS02580 12cec1ca5e32a02a6e615b05981f0114 862 SUPERFAMILY SSF52540 574 804 4.62E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03825 8a7cc8c9caa99d39d9b04b2022859e9f 109 PANTHER PTHR36423 1 109 1.5E-37 T 22-04-2016 VCLMA_RS03825 8a7cc8c9caa99d39d9b04b2022859e9f 109 Pfam PF08883 Dopa 4,5-dioxygenase family 2 102 1.4E-25 T 22-04-2016 IPR014980 Dopa 4,5-dioxygenase VCLMA_RS03825 8a7cc8c9caa99d39d9b04b2022859e9f 109 Gene3D G3DSA:3.30.70.1240 1 106 4.4E-32 T 22-04-2016 IPR023389 DOPA-like domain VCLMA_RS03825 8a7cc8c9caa99d39d9b04b2022859e9f 109 PIRSF PIRSF028139 1 107 2.4E-42 T 22-04-2016 IPR014980 Dopa 4,5-dioxygenase VCLMA_RS03825 8a7cc8c9caa99d39d9b04b2022859e9f 109 SUPERFAMILY SSF143410 1 105 3.79E-33 T 22-04-2016 IPR023389 DOPA-like domain VCLMA_RS12110 944973e64e1dc44980c162d226e4434a 609 Gene3D G3DSA:3.40.720.10 249 543 4.4E-42 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VCLMA_RS12110 944973e64e1dc44980c162d226e4434a 609 SUPERFAMILY SSF53649 245 575 2.36E-60 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VCLMA_RS12110 944973e64e1dc44980c162d226e4434a 609 Pfam PF00884 Sulfatase 249 524 5.0E-33 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VCLMA_RS12110 944973e64e1dc44980c162d226e4434a 609 PANTHER PTHR10342 221 609 1.3E-195 T 22-04-2016 VCLMA_RS12110 944973e64e1dc44980c162d226e4434a 609 PANTHER PTHR10342:SF235 221 609 1.3E-195 T 22-04-2016 VCLMA_RS12110 944973e64e1dc44980c162d226e4434a 609 PIRSF PIRSF004950 1 609 1.6E-236 T 22-04-2016 IPR012159 Inner membrane protein YejM VCLMA_RS12110 944973e64e1dc44980c162d226e4434a 609 Pfam PF11893 Domain of unknown function (DUF3413) 4 241 1.9E-64 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VCLMA_RS00360 2b964ff3189c027753237885a8974fab 396 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VCLMA_RS00360 2b964ff3189c027753237885a8974fab 396 Gene3D G3DSA:1.20.1250.20 208 382 7.0E-10 T 22-04-2016 VCLMA_RS00360 2b964ff3189c027753237885a8974fab 396 PANTHER PTHR23502:SF19 10 389 1.2E-118 T 22-04-2016 VCLMA_RS00360 2b964ff3189c027753237885a8974fab 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 356 1.9E-67 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VCLMA_RS00360 2b964ff3189c027753237885a8974fab 396 Gene3D G3DSA:1.20.1250.20 8 186 1.5E-31 T 22-04-2016 VCLMA_RS00360 2b964ff3189c027753237885a8974fab 396 Pfam PF07690 Major Facilitator Superfamily 14 351 8.8E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS00360 2b964ff3189c027753237885a8974fab 396 SUPERFAMILY SSF103473 8 389 1.57E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS00360 2b964ff3189c027753237885a8974fab 396 PANTHER PTHR23502 10 389 1.2E-118 T 22-04-2016 VCLMA_RS11345 e78a7a69be4a9b50310db7dc90d69781 271 SUPERFAMILY SSF101386 138 240 7.56E-25 T 22-04-2016 VCLMA_RS11345 e78a7a69be4a9b50310db7dc90d69781 271 Gene3D G3DSA:1.10.287.1080 134 223 2.2E-12 T 22-04-2016 VCLMA_RS11345 e78a7a69be4a9b50310db7dc90d69781 271 Gene3D G3DSA:1.10.287.1080 6 73 1.3E-7 T 22-04-2016 VCLMA_RS11345 e78a7a69be4a9b50310db7dc90d69781 271 PANTHER PTHR30522 5 266 5.0E-130 T 22-04-2016 VCLMA_RS11345 e78a7a69be4a9b50310db7dc90d69781 271 PANTHER PTHR30522:SF0 5 266 5.0E-130 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VCLMA_RS11345 e78a7a69be4a9b50310db7dc90d69781 271 SUPERFAMILY SSF101386 3 104 4.51E-24 T 22-04-2016 VCLMA_RS11345 e78a7a69be4a9b50310db7dc90d69781 271 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 7.7E-104 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG VCLMA_RS11345 e78a7a69be4a9b50310db7dc90d69781 271 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 170 229 3.1E-7 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VCLMA_RS11345 e78a7a69be4a9b50310db7dc90d69781 271 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 8.8E-27 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VCLMA_RS00575 8af5f22603f884798b2d98629057a4dc 462 Pfam PF06969 HemN C-terminal domain 368 436 5.5E-11 T 22-04-2016 IPR010723 HemN, C-terminal VCLMA_RS00575 8af5f22603f884798b2d98629057a4dc 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 2.3E-208 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VCLMA_RS00575 8af5f22603f884798b2d98629057a4dc 462 PIRSF PIRSF000167 8 459 2.2E-171 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 VCLMA_RS00575 8af5f22603f884798b2d98629057a4dc 462 PANTHER PTHR13932:SF6 4 456 8.0E-274 T 22-04-2016 VCLMA_RS00575 8af5f22603f884798b2d98629057a4dc 462 PANTHER PTHR13932 4 456 8.0E-274 T 22-04-2016 VCLMA_RS00575 8af5f22603f884798b2d98629057a4dc 462 SMART SM00729 57 277 1.8E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VCLMA_RS00575 8af5f22603f884798b2d98629057a4dc 462 Gene3D G3DSA:3.80.30.20 58 287 2.5E-31 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VCLMA_RS00575 8af5f22603f884798b2d98629057a4dc 462 SUPERFAMILY SSF102114 11 449 2.22E-144 T 22-04-2016 VCLMA_RS00575 8af5f22603f884798b2d98629057a4dc 462 Pfam PF04055 Radical SAM superfamily 62 232 6.4E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS05070 066ac2597bfce76ec96c598aef64a9b8 329 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 20 213 1.5E-57 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VCLMA_RS05070 066ac2597bfce76ec96c598aef64a9b8 329 PANTHER PTHR17490:SF3 18 329 1.6E-88 T 22-04-2016 VCLMA_RS05070 066ac2597bfce76ec96c598aef64a9b8 329 Gene3D G3DSA:3.90.870.10 18 216 1.1E-73 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VCLMA_RS05070 066ac2597bfce76ec96c598aef64a9b8 329 SUPERFAMILY SSF55821 18 215 7.02E-62 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VCLMA_RS05070 066ac2597bfce76ec96c598aef64a9b8 329 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 329 1.5E-17 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain VCLMA_RS05070 066ac2597bfce76ec96c598aef64a9b8 329 PANTHER PTHR17490 18 329 1.6E-88 T 22-04-2016 VCLMA_RS05070 066ac2597bfce76ec96c598aef64a9b8 329 Pfam PF01300 Telomere recombination 28 203 9.2E-57 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VCLMA_RS05070 066ac2597bfce76ec96c598aef64a9b8 329 PIRSF PIRSF004930 7 329 1.2E-105 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 SMART SM00304 207 259 7.5E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 SMART SM00304 260 312 31.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 SMART SM01049 36 126 1.6E-23 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 Gene3D G3DSA:1.10.287.950 289 505 1.1E-54 T 22-04-2016 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 SUPERFAMILY SSF58104 227 536 2.75E-69 T 22-04-2016 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 Pfam PF17200 Single Cache domain 2 42 182 1.6E-27 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 PANTHER PTHR32089 77 536 2.3E-163 T 22-04-2016 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 Pfam PF00672 HAMP domain 188 254 2.8E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 PANTHER PTHR32089:SF64 77 536 2.3E-163 T 22-04-2016 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 534 2.7E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 SMART SM00283 274 535 1.4E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS05885 497a0f5f26c58d447adc352583d54f99 536 Gene3D G3DSA:3.30.450.20 25 177 3.3E-37 T 22-04-2016 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 1.2E-8 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 PANTHER PTHR10909:SF283 32 474 1.8E-249 T 22-04-2016 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 SUPERFAMILY SSF47203 301 453 2.42E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 66 173 3.4E-15 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 6.6E-10 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 Gene3D G3DSA:1.20.140.10 290 448 1.1E-21 T 22-04-2016 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 SUPERFAMILY SSF56645 61 296 2.62E-46 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 4.5E-108 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 Gene3D G3DSA:1.10.540.10 64 171 2.0E-27 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 Gene3D G3DSA:2.40.110.10 178 289 3.9E-18 T 22-04-2016 VCLMA_RS08095 4558d7b1a971d7bf9353b9986fefa616 760 PANTHER PTHR10909 32 474 1.8E-249 T 22-04-2016 VCLMA_RS06035 0dc9114668bc8b78e5f172055333a4f9 534 PANTHER PTHR30047 1 533 6.5E-248 T 22-04-2016 VCLMA_RS06035 0dc9114668bc8b78e5f172055333a4f9 534 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 VCLMA_RS06035 0dc9114668bc8b78e5f172055333a4f9 534 PANTHER PTHR30047:SF2 1 533 6.5E-248 T 22-04-2016 VCLMA_RS06035 0dc9114668bc8b78e5f172055333a4f9 534 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 521 1.2E-138 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VCLMA_RS06035 0dc9114668bc8b78e5f172055333a4f9 534 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 7.8E-176 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 9 218 5.2E-91 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 PANTHER PTHR30070:SF1 2 222 7.9E-75 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 Pfam PF03379 CcmB protein 6 219 5.4E-89 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 PIRSF PIRSF002764 1 222 3.5E-83 T 22-04-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 1.4E-69 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 103 121 1.4E-69 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 195 218 1.4E-69 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 1.4E-69 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 1.4E-69 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 1.4E-69 T 22-04-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09475 5ad2fb964f726c227430821c144b4957 222 PANTHER PTHR30070 2 222 7.9E-75 T 22-04-2016 VCLMA_RS16935 d213b086d9f2f2e3cd1a5d16b9f29b49 285 PANTHER PTHR30282 2 285 1.6E-187 T 22-04-2016 VCLMA_RS16935 d213b086d9f2f2e3cd1a5d16b9f29b49 285 PANTHER PTHR30282:SF1 2 285 1.6E-187 T 22-04-2016 VCLMA_RS16935 d213b086d9f2f2e3cd1a5d16b9f29b49 285 Pfam PF03806 AbgT putative transporter family 16 284 2.1E-112 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VCLMA_RS12000 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.5E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VCLMA_RS12000 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site VCLMA_RS12000 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VCLMA_RS12000 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VCLMA_RS12000 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VCLMA_RS12000 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 4.5E-33 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VCLMA_RS12000 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.0E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 VCLMA_RS12000 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PANTHER PTHR15892 1 58 2.5E-30 T 22-04-2016 VCLMA_RS07715 7675b205d74ad28819b3df6c83c00bc3 308 SMART SM00382 30 212 9.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS07715 7675b205d74ad28819b3df6c83c00bc3 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS07715 7675b205d74ad28819b3df6c83c00bc3 308 Pfam PF00005 ABC transporter 22 165 3.8E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS07715 7675b205d74ad28819b3df6c83c00bc3 308 PANTHER PTHR24220:SF0 292 299 9.3E-101 T 22-04-2016 VCLMA_RS07715 7675b205d74ad28819b3df6c83c00bc3 308 PANTHER PTHR24220:SF0 7 227 9.3E-101 T 22-04-2016 VCLMA_RS07715 7675b205d74ad28819b3df6c83c00bc3 308 PANTHER PTHR24220 292 299 9.3E-101 T 22-04-2016 VCLMA_RS07715 7675b205d74ad28819b3df6c83c00bc3 308 PANTHER PTHR24220 7 227 9.3E-101 T 22-04-2016 VCLMA_RS07715 7675b205d74ad28819b3df6c83c00bc3 308 SUPERFAMILY SSF52540 4 227 7.21E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07715 7675b205d74ad28819b3df6c83c00bc3 308 Gene3D G3DSA:3.40.50.300 2 228 4.5E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 PANTHER PTHR11731 1 113 9.3E-128 T 22-04-2016 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 PANTHER PTHR11731 171 439 9.3E-128 T 22-04-2016 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 SUPERFAMILY SSF52964 20 172 1.29E-40 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 Gene3D G3DSA:2.130.10.10 162 439 6.3E-81 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 Pfam PF04052 TolB amino-terminal domain 15 117 2.9E-34 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 SUPERFAMILY SSF69304 167 439 6.41E-59 T 22-04-2016 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 Pfam PF07676 WD40-like Beta Propeller Repeat 213 239 8.1E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 Pfam PF07676 WD40-like Beta Propeller Repeat 248 283 5.1E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 Pfam PF07676 WD40-like Beta Propeller Repeat 292 327 5.1E-14 T 22-04-2016 IPR011659 WD40-like Beta Propeller VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 7 438 1.9E-173 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 Hamap MF_00671 Protein TolB [tolB]. 1 437 35.615 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 PANTHER PTHR11731:SF123 1 113 9.3E-128 T 22-04-2016 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 PANTHER PTHR11731:SF123 171 439 9.3E-128 T 22-04-2016 VCLMA_RS08415 113b1eef881b405814ee633a13bfb96e 441 Gene3D G3DSA:3.40.50.10070 15 161 3.6E-52 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VCLMA_RS05475 8066aab3995482ba2d97f30ba54b3121 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 13 322 53.926 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VCLMA_RS05475 8066aab3995482ba2d97f30ba54b3121 323 PANTHER PTHR10108:SF847 55 322 3.7E-140 T 22-04-2016 VCLMA_RS05475 8066aab3995482ba2d97f30ba54b3121 323 Gene3D G3DSA:3.40.50.150 97 275 1.0E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05475 8066aab3995482ba2d97f30ba54b3121 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 1.1E-172 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like VCLMA_RS05475 8066aab3995482ba2d97f30ba54b3121 323 SUPERFAMILY SSF53335 91 323 5.88E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05475 8066aab3995482ba2d97f30ba54b3121 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 9 321 2.9E-146 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 VCLMA_RS05475 8066aab3995482ba2d97f30ba54b3121 323 PANTHER PTHR10108 55 322 3.7E-140 T 22-04-2016 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 Gene3D G3DSA:3.40.190.10 91 183 1.1E-19 T 22-04-2016 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 Pfam PF03466 LysR substrate binding domain 91 292 7.5E-38 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 PANTHER PTHR30126:SF6 1 309 2.4E-219 T 22-04-2016 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 PANTHER PTHR30126 1 309 2.4E-219 T 22-04-2016 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 SUPERFAMILY SSF46785 1 87 4.42E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 Gene3D G3DSA:3.40.190.10 184 260 1.3E-29 T 22-04-2016 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 SUPERFAMILY SSF53850 91 322 3.98E-40 T 22-04-2016 VCLMA_RS08760 00643c02a677570fef498db2ba672cf4 324 Gene3D G3DSA:1.10.10.10 1 81 3.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 PANTHER PTHR33154 1 96 3.4E-29 T 22-04-2016 VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 PANTHER PTHR33154:SF10 1 96 3.4E-29 T 22-04-2016 VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 SUPERFAMILY SSF46785 9 97 4.23E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 Gene3D G3DSA:1.10.10.10 2 97 1.0E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 6.4E-18 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.3E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.3E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 1.3E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.3E-15 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS03305 7d4e59e0c79c8348adddc7117683e3c4 100 SMART SM00418 15 93 7.2E-30 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 PIRSF PIRSF001111 1 291 1.9E-126 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 SUPERFAMILY SSF47336 219 288 6.94E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 Gene3D G3DSA:3.40.50.850 1 207 6.3E-58 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 PANTHER PTHR11080 4 266 8.2E-122 T 22-04-2016 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 PANTHER PTHR11080:SF4 4 266 8.2E-122 T 22-04-2016 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 Pfam PF00857 Isochorismatase family 30 200 2.4E-36 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 Pfam PF00550 Phosphopantetheine attachment site 224 279 1.4E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 PRINTS PR01398 Isochorismatase signature 181 198 4.9E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 PRINTS PR01398 Isochorismatase signature 163 181 4.9E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 PRINTS PR01398 Isochorismatase signature 107 129 4.9E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 PRINTS PR01398 Isochorismatase signature 2 14 4.9E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 PRINTS PR01398 Isochorismatase signature 78 97 4.9E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 PRINTS PR01398 Isochorismatase signature 61 78 4.9E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 Gene3D G3DSA:1.10.1200.10 225 287 2.7E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS03745 50540df60d62e013fedc36f5df141df2 293 SUPERFAMILY SSF52499 2 206 5.1E-59 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 PIRSF PIRSF002867 1 312 1.2E-105 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 Gene3D G3DSA:2.30.30.40 98 130 7.4E-4 T 22-04-2016 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 SUPERFAMILY SSF50341 16 162 8.76E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 SUPERFAMILY SSF52172 180 310 5.69E-22 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 PANTHER PTHR22617 1 174 1.3E-94 T 22-04-2016 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 Gene3D G3DSA:3.40.50.2300 181 310 6.7E-23 T 22-04-2016 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 SMART SM00260 17 158 6.3E-28 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 Pfam PF01584 CheW-like domain 21 160 2.9E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 Pfam PF00072 Response regulator receiver domain 186 303 3.1E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 Gene3D G3DSA:2.40.50.180 61 97 1.9E-5 T 22-04-2016 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 SMART SM00448 184 305 1.7E-9 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS09220 2ffc6f3781631b522ceb2b6a3125ebce 314 PANTHER PTHR22617:SF37 1 174 1.3E-94 T 22-04-2016 VCLMA_RS03200 97b12c0dad2c659fd7a82010e59a1cdf 167 PANTHER PTHR23091:SF237 1 164 1.4E-25 T 22-04-2016 VCLMA_RS03200 97b12c0dad2c659fd7a82010e59a1cdf 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 123 9.4E-11 T 22-04-2016 VCLMA_RS03200 97b12c0dad2c659fd7a82010e59a1cdf 167 Gene3D G3DSA:3.40.630.30 2 128 1.2E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS03200 97b12c0dad2c659fd7a82010e59a1cdf 167 PANTHER PTHR23091 1 164 1.4E-25 T 22-04-2016 VCLMA_RS03200 97b12c0dad2c659fd7a82010e59a1cdf 167 SUPERFAMILY SSF55729 1 130 1.44E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 Gene3D G3DSA:3.30.43.10 18 81 6.8E-21 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 Gene3D G3DSA:3.90.78.10 243 352 3.4E-45 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 357 87.505 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 PANTHER PTHR21071 1 349 5.9E-195 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 342 1.4E-95 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 219 341 5.1E-35 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 SUPERFAMILY SSF56176 18 208 1.25E-44 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 Pfam PF01565 FAD binding domain 33 163 3.5E-22 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 SUPERFAMILY SSF56194 215 352 3.53E-50 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 PANTHER PTHR21071:SF6 1 349 5.9E-195 T 22-04-2016 VCLMA_RS01540 3088a5551141b0ae5a47130965c52315 357 Gene3D G3DSA:3.30.465.10 86 242 4.9E-53 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 2.0E-126 T 22-04-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 1.8E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 1.8E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 1.8E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 1.8E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 1.8E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.8E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.8E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 1.8E-94 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 6.7E-259 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 Pfam PF01578 Cytochrome C assembly protein 89 297 1.5E-55 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PANTHER PTHR30009:SF0 1 418 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PANTHER PTHR30009:SF0 470 651 0.0 T 22-04-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 7.4E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 7.4E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 7.4E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 7.4E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 7.4E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 7.4E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 7.4E-61 T 22-04-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PANTHER PTHR30009 1 418 0.0 T 22-04-2016 VCLMA_RS09455 571062bd18718142678f4857923f097e 651 PANTHER PTHR30009 470 651 0.0 T 22-04-2016 VCLMA_RS12035 72999f063f8685aa14f3587c96a7027c 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.1E-40 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12035 72999f063f8685aa14f3587c96a7027c 105 SMART SM00739 4 31 5.3E-4 T 22-04-2016 IPR005824 KOW VCLMA_RS12035 72999f063f8685aa14f3587c96a7027c 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.983 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12035 72999f063f8685aa14f3587c96a7027c 105 Gene3D G3DSA:2.30.30.30 3 92 3.1E-22 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VCLMA_RS12035 72999f063f8685aa14f3587c96a7027c 105 Pfam PF00467 KOW motif 9 37 7.7E-6 T 22-04-2016 IPR005824 KOW VCLMA_RS12035 72999f063f8685aa14f3587c96a7027c 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 3.4E-23 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12035 72999f063f8685aa14f3587c96a7027c 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12035 72999f063f8685aa14f3587c96a7027c 105 SUPERFAMILY SSF50104 4 102 1.02E-33 T 22-04-2016 IPR008991 Translation protein SH3-like domain VCLMA_RS12035 72999f063f8685aa14f3587c96a7027c 105 PANTHER PTHR12903 4 103 3.0E-45 T 22-04-2016 VCLMA_RS17435 7f75d313351798acdc70c3a8ac6ad6ad 203 Pfam PF04348 LppC putative lipoprotein 1 189 1.5E-77 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA VCLMA_RS17435 7f75d313351798acdc70c3a8ac6ad6ad 203 Gene3D G3DSA:3.40.50.2300 7 160 1.3E-30 T 22-04-2016 VCLMA_RS17435 7f75d313351798acdc70c3a8ac6ad6ad 203 PANTHER PTHR38038:SF1 1 203 1.5E-68 T 22-04-2016 VCLMA_RS17435 7f75d313351798acdc70c3a8ac6ad6ad 203 PANTHER PTHR38038 1 203 1.5E-68 T 22-04-2016 VCLMA_RS17435 7f75d313351798acdc70c3a8ac6ad6ad 203 SUPERFAMILY SSF53822 11 186 1.75E-38 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 SUPERFAMILY SSF55811 218 344 3.02E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 SMART SM00525 189 209 1.8E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 Gene3D G3DSA:3.90.79.10 227 345 8.3E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 Pfam PF00633 Helix-hairpin-helix motif 97 125 7.9E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 PANTHER PTHR10359 1 344 2.9E-108 T 22-04-2016 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 Gene3D G3DSA:1.10.340.30 20 120 4.1E-46 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 SUPERFAMILY SSF48150 3 223 2.36E-77 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 Pfam PF14815 NUDIX domain 231 343 2.0E-22 T 22-04-2016 IPR029119 MutY, C-terminal VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 167 1.3E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 SMART SM00478 37 188 2.1E-49 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 Gene3D G3DSA:1.10.1670.10 121 223 4.9E-40 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VCLMA_RS02285 166dda163b1b12838d72b446e163ef24 353 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 266 1.7E-132 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 SUPERFAMILY SSF52374 340 471 9.19E-24 T 22-04-2016 VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 PANTHER PTHR10584 1 340 7.3E-144 T 22-04-2016 VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 7.0E-126 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 Gene3D G3DSA:3.40.1190.20 13 313 7.9E-67 T 22-04-2016 IPR029056 Ribokinase-like VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 1.0E-61 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 6.2E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 SUPERFAMILY SSF53613 12 305 4.52E-58 T 22-04-2016 IPR029056 Ribokinase-like VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.935 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 Pfam PF01467 Cytidylyltransferase-like 345 470 5.6E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 Gene3D G3DSA:3.40.50.620 340 461 5.2E-35 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 PANTHER PTHR10584:SF159 1 340 7.3E-144 T 22-04-2016 VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 7.3E-47 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB VCLMA_RS11285 448d1d70196e5b54dc43b2b50c433add 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 SUPERFAMILY SSF52540 197 370 1.03E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 2.8E-31 T 22-04-2016 IPR025121 GTPase HflX, N-terminal VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.1E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 Gene3D G3DSA:3.40.50.300 197 362 6.6E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 SUPERFAMILY SSF54980 365 428 8.63E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 PANTHER PTHR10229 1 427 6.6E-188 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 PANTHER PTHR10229:SF0 1 427 6.6E-188 T 22-04-2016 VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 4.6E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 4.6E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 4.6E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 4.0E-156 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.9E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 45.849 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VCLMA_RS01745 239c80b9352f3db54b43e2b7edae7c7f 429 PIRSF PIRSF006809 3 422 6.3E-150 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 VCLMA_RS09965 053e343929b973e32821ae8c6ec672e7 78 Gene3D G3DSA:3.30.110.40 4 53 1.8E-11 T 22-04-2016 IPR001455 TusA-like domain VCLMA_RS09965 053e343929b973e32821ae8c6ec672e7 78 SUPERFAMILY SSF64307 4 64 9.55E-13 T 22-04-2016 IPR001455 TusA-like domain VCLMA_RS09965 053e343929b973e32821ae8c6ec672e7 78 Pfam PF01206 Sulfurtransferase TusA 5 55 1.1E-11 T 22-04-2016 IPR001455 TusA-like domain VCLMA_RS05000 e5f953cec0ac237dd85af075e94813ea 143 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 32 132 5.8E-41 T 22-04-2016 VCLMA_RS05000 e5f953cec0ac237dd85af075e94813ea 143 PANTHER PTHR38013 1 143 2.1E-53 T 22-04-2016 VCLMA_RS11075 e7caa1732669cd2e65a3e54235993738 132 PANTHER PTHR22769:SF35 2 130 1.6E-38 T 22-04-2016 VCLMA_RS11075 e7caa1732669cd2e65a3e54235993738 132 Pfam PF00293 NUDIX domain 6 126 1.3E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VCLMA_RS11075 e7caa1732669cd2e65a3e54235993738 132 Gene3D G3DSA:3.90.79.10 2 127 3.6E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS11075 e7caa1732669cd2e65a3e54235993738 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 1.7E-9 T 22-04-2016 IPR020476 NUDIX hydrolase VCLMA_RS11075 e7caa1732669cd2e65a3e54235993738 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 1.7E-9 T 22-04-2016 IPR020476 NUDIX hydrolase VCLMA_RS11075 e7caa1732669cd2e65a3e54235993738 132 SUPERFAMILY SSF55811 2 127 1.49E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS11075 e7caa1732669cd2e65a3e54235993738 132 PANTHER PTHR22769 2 130 1.6E-38 T 22-04-2016 VCLMA_RS11075 e7caa1732669cd2e65a3e54235993738 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 2 126 1.5E-40 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VCLMA_RS11075 e7caa1732669cd2e65a3e54235993738 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VCLMA_RS07775 d00079eb2de47a3b335727cc1e5a1e0a 201 SUPERFAMILY SSF56024 5 187 3.36E-46 T 22-04-2016 VCLMA_RS07775 d00079eb2de47a3b335727cc1e5a1e0a 201 SMART SM00155 114 141 1.8E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VCLMA_RS07775 d00079eb2de47a3b335727cc1e5a1e0a 201 PANTHER PTHR21248 1 201 5.3E-123 T 22-04-2016 VCLMA_RS07775 d00079eb2de47a3b335727cc1e5a1e0a 201 Pfam PF13091 PLD-like domain 44 162 7.0E-25 T 22-04-2016 IPR025202 Phospholipase D-like domain VCLMA_RS07775 d00079eb2de47a3b335727cc1e5a1e0a 201 Gene3D G3DSA:3.30.870.10 37 174 2.1E-34 T 22-04-2016 VCLMA_RS07775 d00079eb2de47a3b335727cc1e5a1e0a 201 PANTHER PTHR21248:SF9 1 201 5.3E-123 T 22-04-2016 VCLMA_RS00380 181e09e9c8638955843638f168115ce4 261 PANTHER PTHR36112 16 261 1.8E-148 T 22-04-2016 VCLMA_RS00380 181e09e9c8638955843638f168115ce4 261 Pfam PF04445 Putative SAM-dependent methyltransferase 19 254 1.0E-106 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VCLMA_RS00380 181e09e9c8638955843638f168115ce4 261 Gene3D G3DSA:3.40.50.150 57 256 4.2E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00380 181e09e9c8638955843638f168115ce4 261 PANTHER PTHR36112:SF1 16 261 1.8E-148 T 22-04-2016 VCLMA_RS00380 181e09e9c8638955843638f168115ce4 261 SUPERFAMILY SSF53335 4 255 1.14E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00380 181e09e9c8638955843638f168115ce4 261 Gene3D G3DSA:3.40.1630.10 3 56 3.5E-27 T 22-04-2016 VCLMA_RS00380 181e09e9c8638955843638f168115ce4 261 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 39.162 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 SMART SM00387 528 641 2.8E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 531 639 1.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PANTHER PTHR24423:SF555 225 258 3.4E-50 T 22-04-2016 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PANTHER PTHR24423:SF555 1 14 3.4E-50 T 22-04-2016 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PANTHER PTHR24423 225 258 3.4E-50 T 22-04-2016 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PANTHER PTHR24423 324 368 3.4E-50 T 22-04-2016 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PANTHER PTHR24423 1 14 3.4E-50 T 22-04-2016 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PANTHER PTHR24423:SF555 452 642 3.4E-50 T 22-04-2016 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 381 1.4E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 SUPERFAMILY SSF52172 3 136 1.35E-6 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 Gene3D G3DSA:3.40.50.2300 6 126 7.0E-6 T 22-04-2016 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 Gene3D G3DSA:3.30.565.10 491 639 3.8E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 Gene3D G3DSA:1.10.287.130 335 394 5.6E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 Pfam PF00027 Cyclic nucleotide-binding domain 202 288 3.3E-17 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 SUPERFAMILY SSF51206 201 310 1.1E-20 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 583 1.8E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 619 1.8E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 638 1.8E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 Gene3D G3DSA:2.60.120.10 202 310 6.9E-18 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PANTHER PTHR24423 452 642 3.4E-50 T 22-04-2016 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 SUPERFAMILY SSF47384 335 378 1.35E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 PANTHER PTHR24423:SF555 324 368 3.4E-50 T 22-04-2016 VCLMA_RS05445 fb2a4ed7bba78c2e91d73a73c2ceacae 651 SUPERFAMILY SSF55874 481 639 4.71E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS07470 cdd6f3b44c5b8c6507befb73809c5ad8 324 SUPERFAMILY SSF111369 114 270 9.29E-5 T 22-04-2016 VCLMA_RS07470 cdd6f3b44c5b8c6507befb73809c5ad8 324 Gene3D G3DSA:2.40.50.100 42 76 2.0E-13 T 22-04-2016 VCLMA_RS07470 cdd6f3b44c5b8c6507befb73809c5ad8 324 Gene3D G3DSA:2.40.50.100 203 237 2.0E-13 T 22-04-2016 VCLMA_RS07470 cdd6f3b44c5b8c6507befb73809c5ad8 324 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 40 277 2.7E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCLMA_RS07470 cdd6f3b44c5b8c6507befb73809c5ad8 324 PANTHER PTHR30438 6 322 7.5E-132 T 22-04-2016 VCLMA_RS07470 cdd6f3b44c5b8c6507befb73809c5ad8 324 PANTHER PTHR30438:SF1 6 322 7.5E-132 T 22-04-2016 VCLMA_RS07470 cdd6f3b44c5b8c6507befb73809c5ad8 324 SUPERFAMILY SSF111369 40 102 6.41E-6 T 22-04-2016 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 SUPERFAMILY SSF55909 4 407 9.99E-126 T 22-04-2016 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 Pfam PF02274 Amidinotransferase 19 404 1.0E-98 T 22-04-2016 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 Gene3D G3DSA:3.75.10.10 149 407 2.8E-124 T 22-04-2016 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 Gene3D G3DSA:3.75.10.10 1 67 2.8E-124 T 22-04-2016 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 TIGRFAM TIGR01078 arcA: arginine deiminase 4 407 3.1E-179 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PRINTS PR01466 Bacterial arginine deiminase signature 363 377 3.3E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 3.3E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 3.3E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PRINTS PR01466 Bacterial arginine deiminase signature 386 404 3.3E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 3.3E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PRINTS PR01466 Bacterial arginine deiminase signature 343 360 3.3E-44 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PANTHER PTHR12737 149 291 1.2E-121 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PANTHER PTHR12737 313 407 1.2E-121 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PANTHER PTHR12737 2 91 1.2E-121 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PANTHER PTHR12737:SF13 149 291 1.2E-121 T 22-04-2016 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PANTHER PTHR12737:SF13 313 407 1.2E-121 T 22-04-2016 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PANTHER PTHR12737:SF13 2 91 1.2E-121 T 22-04-2016 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 PIRSF PIRSF006356 1 407 1.8E-151 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS02135 dabe3d0867fa50e151e406a660a3e220 407 Hamap MF_00242 Arginine deiminase [arcA]. 1 407 43.36 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 SUPERFAMILY SSF56954 17 480 6.8E-91 T 22-04-2016 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 PANTHER PTHR30203 1 480 6.7E-212 T 22-04-2016 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 478 3.2E-174 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 Gene3D G3DSA:1.20.1600.10 63 103 3.3E-84 T 22-04-2016 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 Gene3D G3DSA:1.20.1600.10 155 327 3.3E-84 T 22-04-2016 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 Gene3D G3DSA:1.20.1600.10 365 479 3.3E-84 T 22-04-2016 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 Gene3D G3DSA:2.20.200.10 116 154 3.2E-24 T 22-04-2016 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 Gene3D G3DSA:2.20.200.10 328 363 3.2E-24 T 22-04-2016 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 PANTHER PTHR30203:SF6 1 480 6.7E-212 T 22-04-2016 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 Pfam PF02321 Outer membrane efflux protein 77 267 2.4E-18 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VCLMA_RS06645 5705c07dbc064f84c2a2c168684678b1 484 Pfam PF02321 Outer membrane efflux protein 300 475 1.2E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VCLMA_RS05935 0616cf5111e57b3e97b7ff1cdef79c1d 327 Hamap MF_00469 UPF0176 protein YceA [yceA]. 2 254 45.005 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 VCLMA_RS05935 0616cf5111e57b3e97b7ff1cdef79c1d 327 Pfam PF00581 Rhodanese-like domain 118 210 4.1E-8 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS05935 0616cf5111e57b3e97b7ff1cdef79c1d 327 PANTHER PTHR22778 2 288 3.0E-112 T 22-04-2016 VCLMA_RS05935 0616cf5111e57b3e97b7ff1cdef79c1d 327 SMART SM00450 113 214 1.5E-21 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS05935 0616cf5111e57b3e97b7ff1cdef79c1d 327 PANTHER PTHR22778:SF12 2 288 3.0E-112 T 22-04-2016 VCLMA_RS05935 0616cf5111e57b3e97b7ff1cdef79c1d 327 SUPERFAMILY SSF52821 94 237 4.25E-31 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS05935 0616cf5111e57b3e97b7ff1cdef79c1d 327 Gene3D G3DSA:3.40.250.10 87 226 7.5E-41 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 320 348 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 PANTHER PTHR21666:SF215 284 483 3.2E-130 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 Pfam PF01464 Transglycosylase SLT domain 310 412 4.6E-22 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 SUPERFAMILY SSF53955 257 408 8.44E-39 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 SUPERFAMILY SSF53955 443 461 8.44E-39 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 Gene3D G3DSA:3.40.190.10 20 147 1.5E-24 T 22-04-2016 VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 Gene3D G3DSA:1.10.530.10 297 467 1.2E-39 T 22-04-2016 VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 278 2.8E-32 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 PANTHER PTHR21666 284 483 3.2E-130 T 22-04-2016 VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 9 486 49.01 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 SMART SM00062 43 279 1.3E-29 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS04060 a7ee25931c06511004a9bb1632be437d 530 SUPERFAMILY SSF53850 44 278 1.63E-36 T 22-04-2016 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 Pfam PF02272 DHHA1 domain 786 853 6.5E-16 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 SUPERFAMILY SSF50447 454 551 7.06E-19 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 7.3E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 SUPERFAMILY SSF101353 255 460 2.62E-59 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 SUPERFAMILY SSF55186 551 711 4.58E-53 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 SUPERFAMILY SSF55681 3 254 6.46E-109 T 22-04-2016 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 Pfam PF01411 tRNA synthetases class II (A) 7 555 1.5E-223 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 SMART SM00863 652 695 2.4E-21 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 197.886 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 PANTHER PTHR11777:SF9 1 860 0.0 T 22-04-2016 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 PANTHER PTHR11777 1 860 0.0 T 22-04-2016 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.8E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.8E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.8E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.8E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.8E-31 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 VCLMA_RS02625 3d60894c8ea92d41dec4c23c61092ce0 860 Gene3D G3DSA:3.30.930.10 3 251 1.8E-123 T 22-04-2016 VCLMA_RS02890 865d7b869f756747fde5bf825a6fe297 167 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 3.9E-37 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02890 865d7b869f756747fde5bf825a6fe297 167 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.7E-45 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02890 865d7b869f756747fde5bf825a6fe297 167 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02890 865d7b869f756747fde5bf825a6fe297 167 PANTHER PTHR20941 1 159 1.5E-76 T 22-04-2016 VCLMA_RS02890 865d7b869f756747fde5bf825a6fe297 167 Gene3D G3DSA:3.30.70.560 4 153 1.8E-57 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS02890 865d7b869f756747fde5bf825a6fe297 167 SUPERFAMILY SSF55083 1 159 1.31E-54 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS13245 669470a772c281829d19356d43a62738 317 PANTHER PTHR30557:SF1 1 63 2.1E-160 T 22-04-2016 VCLMA_RS13245 669470a772c281829d19356d43a62738 317 PANTHER PTHR30557:SF1 97 127 2.1E-160 T 22-04-2016 VCLMA_RS13245 669470a772c281829d19356d43a62738 317 Pfam PF01964 Radical SAM ThiC family 105 317 3.2E-75 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VCLMA_RS13245 669470a772c281829d19356d43a62738 317 PANTHER PTHR30557 1 63 2.1E-160 T 22-04-2016 VCLMA_RS13245 669470a772c281829d19356d43a62738 317 PANTHER PTHR30557 97 127 2.1E-160 T 22-04-2016 VCLMA_RS13245 669470a772c281829d19356d43a62738 317 Pfam PF13667 ThiC-associated domain 1 64 4.0E-24 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VCLMA_RS13245 669470a772c281829d19356d43a62738 317 PANTHER PTHR30557:SF1 155 317 2.1E-160 T 22-04-2016 VCLMA_RS13245 669470a772c281829d19356d43a62738 317 PANTHER PTHR30557 155 317 2.1E-160 T 22-04-2016 VCLMA_RS01715 e6a35817e80d7a6f616245f21589064f 368 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 1.1E-23 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS01715 e6a35817e80d7a6f616245f21589064f 368 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 342 6.8E-150 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS01715 e6a35817e80d7a6f616245f21589064f 368 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 7.6E-20 T 22-04-2016 VCLMA_RS01715 e6a35817e80d7a6f616245f21589064f 368 PANTHER PTHR30002:SF4 1 368 9.1E-196 T 22-04-2016 VCLMA_RS01715 e6a35817e80d7a6f616245f21589064f 368 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 310 50.442 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS01715 e6a35817e80d7a6f616245f21589064f 368 PANTHER PTHR30002 1 368 9.1E-196 T 22-04-2016 VCLMA_RS01715 e6a35817e80d7a6f616245f21589064f 368 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS01715 e6a35817e80d7a6f616245f21589064f 368 SUPERFAMILY SSF54862 165 317 6.28E-20 T 22-04-2016 VCLMA_RS01715 e6a35817e80d7a6f616245f21589064f 368 Gene3D G3DSA:3.30.70.20 186 255 2.0E-8 T 22-04-2016 VCLMA_RS16400 8a1aecea0023c3eedaf73aa85d56fbe6 127 Pfam PF01136 Peptidase family U32 1 101 5.0E-46 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS16400 8a1aecea0023c3eedaf73aa85d56fbe6 127 ProSitePatterns PS01276 Peptidase family U32 signature. 49 67 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS16400 8a1aecea0023c3eedaf73aa85d56fbe6 127 PANTHER PTHR30217:SF6 1 104 1.2E-62 T 22-04-2016 VCLMA_RS16400 8a1aecea0023c3eedaf73aa85d56fbe6 127 PANTHER PTHR30217 1 104 1.2E-62 T 22-04-2016 VCLMA_RS09045 61956d058a22db26725fcca72fdaaee5 386 TIGRFAM TIGR00843 benE: benzoate transporter 9 377 1.2E-95 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 VCLMA_RS09045 61956d058a22db26725fcca72fdaaee5 386 Pfam PF03594 Benzoate membrane transport protein 5 379 4.0E-152 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 VCLMA_RS09045 61956d058a22db26725fcca72fdaaee5 386 PANTHER PTHR30199:SF0 4 386 2.7E-183 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 VCLMA_RS09045 61956d058a22db26725fcca72fdaaee5 386 PANTHER PTHR30199 4 386 2.7E-183 T 22-04-2016 VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 Gene3D G3DSA:3.40.50.300 625 684 6.0E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 SUPERFAMILY SSF52540 531 704 3.01E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 SUPERFAMILY SSF52540 433 464 3.01E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 SUPERFAMILY SSF52540 366 406 3.01E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 Pfam PF13538 UvrD-like helicase C-terminal domain 633 678 2.1E-13 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 10 704 4.5E-253 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 17 704 53.067 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 PANTHER PTHR10887 208 407 8.6E-100 T 22-04-2016 VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 PANTHER PTHR10887:SF351 208 407 8.6E-100 T 22-04-2016 VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 Gene3D G3DSA:3.40.50.300 436 464 1.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 Gene3D G3DSA:3.40.50.300 226 403 1.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 Pfam PF13604 AAA domain 238 400 1.8E-30 T 22-04-2016 VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 SUPERFAMILY SSF52540 229 446 1.59E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10760 61699699fd0bd16d18e112a75d6665f2 706 SUPERFAMILY SSF52540 16 163 1.59E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05315 041c3cd5e88a9f9cce740527ae715c12 135 PANTHER PTHR38097:SF2 2 135 1.1E-69 T 22-04-2016 VCLMA_RS05315 041c3cd5e88a9f9cce740527ae715c12 135 PIRSF PIRSF002096 1 135 1.1E-55 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VCLMA_RS05315 041c3cd5e88a9f9cce740527ae715c12 135 Gene3D G3DSA:1.10.287.1050 1 58 1.6E-18 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 VCLMA_RS05315 041c3cd5e88a9f9cce740527ae715c12 135 Pfam PF00816 H-NS histone family 33 129 3.1E-20 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VCLMA_RS05315 041c3cd5e88a9f9cce740527ae715c12 135 SMART SM00528 88 135 6.9E-25 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VCLMA_RS05315 041c3cd5e88a9f9cce740527ae715c12 135 SUPERFAMILY SSF81273 2 58 8.83E-17 T 22-04-2016 VCLMA_RS05315 041c3cd5e88a9f9cce740527ae715c12 135 Gene3D G3DSA:4.10.430.10 92 135 1.8E-25 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VCLMA_RS05315 041c3cd5e88a9f9cce740527ae715c12 135 PANTHER PTHR38097 2 135 1.1E-69 T 22-04-2016 VCLMA_RS05315 041c3cd5e88a9f9cce740527ae715c12 135 SUPERFAMILY SSF81273 93 134 6.67E-12 T 22-04-2016 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.622 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 6.1E-139 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 SUPERFAMILY SSF52096 25 280 2.46E-86 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 Pfam PF01039 Carboxyl transferase domain 99 241 1.8E-15 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 PANTHER PTHR22855 1 304 3.0E-184 T 22-04-2016 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 Gene3D G3DSA:3.90.226.10 18 278 1.2E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS04680 f4b71896bceffc85043597b7dbedcee7 308 PANTHER PTHR22855:SF17 1 304 3.0E-184 T 22-04-2016 VCLMA_RS02370 eec5dfa5c061f4beba8c1a7c1a667d28 243 Pfam PF04452 RNA methyltransferase 19 236 6.9E-73 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS02370 eec5dfa5c061f4beba8c1a7c1a667d28 243 PANTHER PTHR30027 1 243 9.7E-101 T 22-04-2016 VCLMA_RS02370 eec5dfa5c061f4beba8c1a7c1a667d28 243 PIRSF PIRSF015601 2 242 6.4E-55 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS02370 eec5dfa5c061f4beba8c1a7c1a667d28 243 Gene3D G3DSA:2.40.240.20 1 71 5.3E-26 T 22-04-2016 VCLMA_RS02370 eec5dfa5c061f4beba8c1a7c1a667d28 243 PANTHER PTHR30027:SF3 1 243 9.7E-101 T 22-04-2016 VCLMA_RS02370 eec5dfa5c061f4beba8c1a7c1a667d28 243 SUPERFAMILY SSF88697 2 70 5.72E-17 T 22-04-2016 IPR015947 PUA-like domain VCLMA_RS02370 eec5dfa5c061f4beba8c1a7c1a667d28 243 Gene3D G3DSA:3.40.1280.10 75 242 3.8E-60 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCLMA_RS02370 eec5dfa5c061f4beba8c1a7c1a667d28 243 SUPERFAMILY SSF75217 75 242 6.11E-52 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VCLMA_RS02370 eec5dfa5c061f4beba8c1a7c1a667d28 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 1.2E-84 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS06310 25521e55c53c0a08b228a71a7a26f9d4 294 SUPERFAMILY SSF51621 5 293 5.83E-97 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS06310 25521e55c53c0a08b228a71a7a26f9d4 294 PANTHER PTHR21631:SF4 3 293 1.4E-165 T 22-04-2016 VCLMA_RS06310 25521e55c53c0a08b228a71a7a26f9d4 294 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 259 3.9E-45 T 22-04-2016 VCLMA_RS06310 25521e55c53c0a08b228a71a7a26f9d4 294 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 VCLMA_RS06310 25521e55c53c0a08b228a71a7a26f9d4 294 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 294 4.0E-127 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VCLMA_RS06310 25521e55c53c0a08b228a71a7a26f9d4 294 Gene3D G3DSA:3.20.20.60 5 290 7.2E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS06310 25521e55c53c0a08b228a71a7a26f9d4 294 PANTHER PTHR21631 3 293 1.4E-165 T 22-04-2016 VCLMA_RS06310 25521e55c53c0a08b228a71a7a26f9d4 294 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 294 48.895 T 22-04-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747|UniPathway: UPA00946 VCLMA_RS03600 9168510bc498fc983a9140026413c68e 110 PANTHER PTHR33909:SF1 1 110 1.3E-33 T 22-04-2016 VCLMA_RS03600 9168510bc498fc983a9140026413c68e 110 Pfam PF02699 Preprotein translocase subunit 22 99 3.0E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC VCLMA_RS03600 9168510bc498fc983a9140026413c68e 110 PANTHER PTHR33909 1 110 1.3E-33 T 22-04-2016 VCLMA_RS03600 9168510bc498fc983a9140026413c68e 110 SMART SM01323 18 102 3.2E-38 T 22-04-2016 IPR003849 Preprotein translocase YajC VCLMA_RS03600 9168510bc498fc983a9140026413c68e 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 3.5E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC VCLMA_RS03600 9168510bc498fc983a9140026413c68e 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 3.5E-16 T 22-04-2016 IPR003849 Preprotein translocase YajC VCLMA_RS03600 9168510bc498fc983a9140026413c68e 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 102 1.9E-29 T 22-04-2016 IPR003849 Preprotein translocase YajC VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 Gene3D G3DSA:1.10.150.20 169 238 1.0E-22 T 22-04-2016 VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 SUPERFAMILY SSF100879 245 353 3.14E-23 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 Gene3D G3DSA:3.30.70.270 70 168 9.6E-34 T 22-04-2016 VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 PANTHER PTHR11076:SF32 1 360 5.0E-223 T 22-04-2016 VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 Hamap MF_01113 DNA polymerase IV [dinB]. 5 353 35.893 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 Pfam PF11798 IMS family HHH motif 170 201 3.2E-6 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 PANTHER PTHR11076 1 360 5.0E-223 T 22-04-2016 VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 SUPERFAMILY SSF56672 3 238 5.16E-89 T 22-04-2016 VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 Gene3D G3DSA:3.30.1490.100 241 354 2.7E-40 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS10620 523bf9c98c86f102bc4c8c564753e578 360 Pfam PF00817 impB/mucB/samB family 11 158 2.1E-48 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 424 28.795 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:3.30.300.20 278 347 2.3E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:1.10.150.20 357 420 3.2E-21 T 22-04-2016 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:1.10.150.20 429 493 6.5E-23 T 22-04-2016 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF54814 201 278 1.9E-28 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF47794 349 414 1.73E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 3.3E-21 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 441 489 1.6E-17 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Pfam PF08529 NusA N-terminal domain 4 123 2.1E-35 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF47794 429 492 6.28E-16 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 SMART SM00322 301 375 0.032 T 22-04-2016 IPR004087 K Homology domain GO:0003676 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 SMART SM00322 230 293 34.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF54814 279 342 2.88E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:3.30.1480.10 1 124 1.9E-44 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:3.30.300.20 199 277 2.0E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 SMART SM00316 133 198 1.6E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Gene3D G3DSA:2.40.50.140 128 197 1.9E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 PANTHER PTHR22648 1 448 2.1E-186 T 22-04-2016 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 3.5E-7 T 22-04-2016 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.6E-125 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 PANTHER PTHR22648:SF0 1 448 2.1E-186 T 22-04-2016 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF69705 1 126 1.57E-39 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 SUPERFAMILY SSF50249 132 199 9.43E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS03135 e42856ad8dd3b6b14a68208d37d78b20 495 Pfam PF13184 NusA-like KH domain 230 297 4.8E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 SUPERFAMILY SSF51998 222 739 3.66E-167 T 22-04-2016 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 664 2.6E-114 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 Gene3D G3DSA:3.20.70.20 398 559 1.5E-42 T 22-04-2016 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 Gene3D G3DSA:3.20.70.20 610 701 1.5E-42 T 22-04-2016 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 Gene3D G3DSA:3.20.70.20 137 344 1.5E-42 T 22-04-2016 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 7.0E-175 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 SUPERFAMILY SSF48168 10 221 8.11E-74 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 Pfam PF03477 ATP cone domain 6 92 8.3E-19 T 22-04-2016 IPR005144 ATP-cone domain VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 1.3E-11 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 PANTHER PTHR11573:SF17 6 753 0.0 T 22-04-2016 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.0E-37 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.0E-37 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.0E-37 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.0E-37 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.0E-37 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.0E-37 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VCLMA_RS05920 6069867a4394a14fb883f253b6f9236f 761 PANTHER PTHR11573 6 753 0.0 T 22-04-2016 VCLMA_RS10315 c87e5007528a2a53cc72e0b01eb72c7a 192 PANTHER PTHR35562:SF2 1 184 5.7E-87 T 22-04-2016 VCLMA_RS10315 c87e5007528a2a53cc72e0b01eb72c7a 192 Pfam PF01713 Smr domain 94 174 9.2E-21 T 22-04-2016 IPR002625 Smr domain VCLMA_RS10315 c87e5007528a2a53cc72e0b01eb72c7a 192 SUPERFAMILY SSF160443 92 174 1.15E-14 T 22-04-2016 IPR002625 Smr domain VCLMA_RS10315 c87e5007528a2a53cc72e0b01eb72c7a 192 SMART SM00463 91 174 4.4E-12 T 22-04-2016 IPR002625 Smr domain VCLMA_RS10315 c87e5007528a2a53cc72e0b01eb72c7a 192 PANTHER PTHR35562 1 184 5.7E-87 T 22-04-2016 VCLMA_RS02745 750d48d0630fd2625777f2e81240fc2c 82 PANTHER PTHR12919 1 78 3.7E-37 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02745 750d48d0630fd2625777f2e81240fc2c 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 5.2E-27 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02745 750d48d0630fd2625777f2e81240fc2c 82 Gene3D G3DSA:3.30.1320.10 1 79 8.1E-32 T 22-04-2016 IPR023803 Ribosomal protein S16 domain VCLMA_RS02745 750d48d0630fd2625777f2e81240fc2c 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02745 750d48d0630fd2625777f2e81240fc2c 82 SUPERFAMILY SSF54565 1 77 8.63E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain VCLMA_RS02745 750d48d0630fd2625777f2e81240fc2c 82 Pfam PF00886 Ribosomal protein S16 8 68 2.3E-23 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02745 750d48d0630fd2625777f2e81240fc2c 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.793 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.3E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.3E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.3E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.3E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.3E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 1.5E-71 T 22-04-2016 VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.5E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.5E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.5E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 SUPERFAMILY SSF51735 6 244 6.95E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PANTHER PTHR24322 152 183 8.4E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PANTHER PTHR24322 11 136 8.4E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PANTHER PTHR24322:SF133 152 183 8.4E-57 T 22-04-2016 VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 PANTHER PTHR24322:SF133 11 136 8.4E-57 T 22-04-2016 VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 183 0.004 T 22-04-2016 VCLMA_RS07375 0eca37fec4fedb7aad7ea5d22357d637 252 Gene3D G3DSA:3.40.50.720 3 244 8.9E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PIRSF PIRSF002560 1 157 7.3E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 3.9E-86 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PANTHER PTHR30295:SF9 1 153 2.6E-54 T 22-04-2016 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 SUPERFAMILY SSF47240 1 153 2.9E-56 T 22-04-2016 IPR009078 Ferritin-like superfamily VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 Gene3D G3DSA:1.20.1260.10 1 155 2.0E-67 T 22-04-2016 IPR012347 Ferritin-related VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PANTHER PTHR30295 1 153 2.6E-54 T 22-04-2016 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 Pfam PF00210 Ferritin-like domain 8 143 6.3E-41 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 23 43 7.7E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 65 85 7.7E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 107 127 7.7E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 44 64 7.7E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 86 106 7.7E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 128 149 7.7E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS01825 7e11fafe22802b9a59fd7624ef0bfeb2 158 PRINTS PR00601 Bacterioferritin signature 3 22 7.7E-73 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS09635 65ca5328931af58363cd98ec92099947 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 1.5E-32 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VCLMA_RS09635 65ca5328931af58363cd98ec92099947 114 Gene3D G3DSA:1.20.1300.10 1 113 4.1E-35 T 22-04-2016 VCLMA_RS09635 65ca5328931af58363cd98ec92099947 114 PANTHER PTHR38689 2 114 1.3E-58 T 22-04-2016 VCLMA_RS09635 65ca5328931af58363cd98ec92099947 114 SUPERFAMILY SSF81343 4 113 6.1E-25 T 22-04-2016 VCLMA_RS09635 65ca5328931af58363cd98ec92099947 114 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 10 99 5.2E-6 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 VCLMA_RS09635 65ca5328931af58363cd98ec92099947 114 PANTHER PTHR38689:SF1 2 114 1.3E-58 T 22-04-2016 VCLMA_RS09635 65ca5328931af58363cd98ec92099947 114 PIRSF PIRSF000169 1 114 2.7E-36 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 VCLMA_RS09390 5ac3c911974c3536ab03a012b56396d7 600 Pfam PF00884 Sulfatase 265 513 2.1E-22 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 VCLMA_RS09390 5ac3c911974c3536ab03a012b56396d7 600 PIRSF PIRSF004950 6 598 5.9E-250 T 22-04-2016 IPR012159 Inner membrane protein YejM VCLMA_RS09390 5ac3c911974c3536ab03a012b56396d7 600 PANTHER PTHR10342:SF215 230 541 4.6E-147 T 22-04-2016 VCLMA_RS09390 5ac3c911974c3536ab03a012b56396d7 600 Pfam PF11893 Domain of unknown function (DUF3413) 6 251 2.4E-101 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal VCLMA_RS09390 5ac3c911974c3536ab03a012b56396d7 600 SUPERFAMILY SSF53649 259 580 3.27E-49 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VCLMA_RS09390 5ac3c911974c3536ab03a012b56396d7 600 Gene3D G3DSA:3.40.720.10 259 532 1.0E-32 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VCLMA_RS09390 5ac3c911974c3536ab03a012b56396d7 600 PANTHER PTHR10342 230 541 4.6E-147 T 22-04-2016 VCLMA_RS08645 6698129b30e24232e9d3a32c199d8bbd 228 Pfam PF00005 ABC transporter 24 172 5.7E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS08645 6698129b30e24232e9d3a32c199d8bbd 228 Gene3D G3DSA:3.40.50.300 2 222 1.0E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08645 6698129b30e24232e9d3a32c199d8bbd 228 PANTHER PTHR24220:SF111 6 224 2.5E-125 T 22-04-2016 VCLMA_RS08645 6698129b30e24232e9d3a32c199d8bbd 228 SMART SM00382 33 221 2.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS08645 6698129b30e24232e9d3a32c199d8bbd 228 PANTHER PTHR24220 6 224 2.5E-125 T 22-04-2016 VCLMA_RS08645 6698129b30e24232e9d3a32c199d8bbd 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS08645 6698129b30e24232e9d3a32c199d8bbd 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 3.0E-109 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 VCLMA_RS08645 6698129b30e24232e9d3a32c199d8bbd 228 SUPERFAMILY SSF52540 4 225 3.25E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05260 ba63bfb009db2bca9524b6524279ab78 241 PANTHER PTHR24322 6 173 4.4E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS05260 ba63bfb009db2bca9524b6524279ab78 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.6E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS05260 ba63bfb009db2bca9524b6524279ab78 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.6E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS05260 ba63bfb009db2bca9524b6524279ab78 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.6E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS05260 ba63bfb009db2bca9524b6524279ab78 241 Gene3D G3DSA:3.40.50.720 4 188 7.5E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS05260 ba63bfb009db2bca9524b6524279ab78 241 SUPERFAMILY SSF51735 4 238 7.85E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS05260 ba63bfb009db2bca9524b6524279ab78 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VCLMA_RS05260 ba63bfb009db2bca9524b6524279ab78 241 Pfam PF00106 short chain dehydrogenase 3 181 6.8E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS05260 ba63bfb009db2bca9524b6524279ab78 241 PANTHER PTHR24322:SF330 6 173 4.4E-41 T 22-04-2016 VCLMA_RS09520 76c397fc20512e941d09016ece0ad2d5 122 Gene3D G3DSA:3.40.50.2300 1 121 3.0E-39 T 22-04-2016 VCLMA_RS09520 76c397fc20512e941d09016ece0ad2d5 122 SUPERFAMILY SSF52172 1 120 3.56E-37 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS09520 76c397fc20512e941d09016ece0ad2d5 122 SMART SM00448 1 115 5.7E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS09520 76c397fc20512e941d09016ece0ad2d5 122 PANTHER PTHR26402 1 121 1.3E-42 T 22-04-2016 VCLMA_RS09520 76c397fc20512e941d09016ece0ad2d5 122 Pfam PF00072 Response regulator receiver domain 3 115 9.9E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS09060 0aaf383577a2e79bb128bee5d84821bb 288 PANTHER PTHR11941 12 281 1.9E-195 T 22-04-2016 VCLMA_RS09060 0aaf383577a2e79bb128bee5d84821bb 288 SUPERFAMILY SSF52096 17 284 5.12E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS09060 0aaf383577a2e79bb128bee5d84821bb 288 Gene3D G3DSA:3.90.226.10 25 225 1.0E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS09060 0aaf383577a2e79bb128bee5d84821bb 288 Gene3D G3DSA:1.10.12.10 226 276 4.0E-31 T 22-04-2016 IPR014748 Crontonase, C-terminal VCLMA_RS09060 0aaf383577a2e79bb128bee5d84821bb 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.253 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09060 0aaf383577a2e79bb128bee5d84821bb 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 5.0E-78 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VCLMA_RS09060 0aaf383577a2e79bb128bee5d84821bb 288 PANTHER PTHR11941:SF20 12 281 1.9E-195 T 22-04-2016 VCLMA_RS09060 0aaf383577a2e79bb128bee5d84821bb 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 3.5E-145 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09060 0aaf383577a2e79bb128bee5d84821bb 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 PIRSF PIRSF000429 8 435 1.1E-116 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 2.4E-35 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 PANTHER PTHR18919:SF5 9 435 4.8E-193 T 22-04-2016 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 Gene3D G3DSA:3.40.47.10 174 219 1.6E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 Gene3D G3DSA:3.40.47.10 303 435 1.6E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 2.5E-261 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 66.01 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 SUPERFAMILY SSF53901 296 434 1.6E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 SUPERFAMILY SSF53901 14 294 3.33E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 Gene3D G3DSA:3.40.47.10 220 299 3.8E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 Gene3D G3DSA:3.40.47.10 14 133 3.8E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 1.9E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 PANTHER PTHR18919 9 435 4.8E-193 T 22-04-2016 VCLMA_RS04910 c9ae15521ea2ff3fe8746f471a40cca8 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 7.8E-62 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 SUPERFAMILY SSF51230 1 94 2.36E-25 T 22-04-2016 IPR011053 Single hybrid motif VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 Gene3D G3DSA:4.10.320.10 113 153 1.3E-20 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 Pfam PF02817 e3 binding domain 113 146 7.3E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 SUPERFAMILY SSF47005 107 149 1.16E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 Gene3D G3DSA:2.40.50.100 1 95 1.7E-26 T 22-04-2016 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 404 4.0E-185 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 SUPERFAMILY SSF52777 174 403 4.31E-91 T 22-04-2016 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 PANTHER PTHR23151:SF47 3 404 8.2E-246 T 22-04-2016 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 PANTHER PTHR23151 3 404 8.2E-246 T 22-04-2016 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 Pfam PF00364 Biotin-requiring enzyme 4 76 4.1E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 174 402 2.6E-82 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 VCLMA_RS09615 86b65825ee7e4aa11c2907e6eb37a79a 404 Gene3D G3DSA:3.30.559.10 166 402 3.3E-92 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 Pfam PF00664 ABC transporter transmembrane region 171 437 5.4E-45 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 SMART SM00382 508 694 1.9E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 PANTHER PTHR24221 138 721 1.4E-202 T 22-04-2016 VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 PANTHER PTHR24221 102 116 1.4E-202 T 22-04-2016 VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 Gene3D G3DSA:1.20.1560.10 155 466 2.1E-73 T 22-04-2016 VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 SUPERFAMILY SSF90123 155 466 6.28E-65 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 Pfam PF00005 ABC transporter 499 648 3.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 Gene3D G3DSA:3.40.50.300 482 713 1.3E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 TIGRFAM TIGR01846 type_I_sec_HlyB: type I secretion system ATPase 27 720 0.0 T 22-04-2016 IPR010132 ATPase, type I secretion system, HlyB GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 SUPERFAMILY SSF52540 473 718 9.88E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 ProSitePatterns PS00211 ABC transporters family signature. 620 634 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 Pfam PF03412 Peptidase C39 family 23 117 1.6E-5 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 VCLMA_RS06815 8ed51b921e575b1cf0f5bd56ab748f9e 721 Gene3D G3DSA:3.90.70.10 22 126 1.0E-17 T 22-04-2016 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 SUPERFAMILY SSF68923 11 228 2.44E-87 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 PANTHER PTHR30031 5 542 0.0 T 22-04-2016 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 3.0E-210 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 Gene3D G3DSA:3.90.228.20 352 540 1.1E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 Gene3D G3DSA:3.90.228.20 229 291 1.1E-120 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 541 7.8E-279 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 Gene3D G3DSA:3.40.449.10 24 228 4.6E-86 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 PANTHER PTHR30031:SF0 5 542 0.0 T 22-04-2016 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 SUPERFAMILY SSF53795 230 541 1.68E-127 T 22-04-2016 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 18 539 54.705 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VCLMA_RS12755 3f1713e19cccf25b251246ff9c921360 542 PIRSF PIRSF006294 4 541 4.9E-226 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 VCLMA_RS04445 dab881c140df510c8a510bdd65497843 156 PANTHER PTHR33603 1 155 1.2E-72 T 22-04-2016 VCLMA_RS04445 dab881c140df510c8a510bdd65497843 156 SUPERFAMILY SSF75217 2 154 3.35E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VCLMA_RS04445 dab881c140df510c8a510bdd65497843 156 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 9.7E-49 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS04445 dab881c140df510c8a510bdd65497843 156 PANTHER PTHR33603:SF1 1 155 1.2E-72 T 22-04-2016 VCLMA_RS04445 dab881c140df510c8a510bdd65497843 156 PIRSF PIRSF004505 1 155 1.6E-43 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS04445 dab881c140df510c8a510bdd65497843 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 156 3.7E-78 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS04445 dab881c140df510c8a510bdd65497843 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.77 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS04445 dab881c140df510c8a510bdd65497843 156 Gene3D G3DSA:3.40.1280.10 2 155 5.7E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 SUPERFAMILY SSF82689 186 284 3.66E-35 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 PANTHER PTHR30221:SF7 5 285 3.2E-114 T 22-04-2016 VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 PANTHER PTHR30221 5 285 3.2E-114 T 22-04-2016 VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 SUPERFAMILY SSF50182 120 185 2.68E-17 T 22-04-2016 IPR010920 LSM domain VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 Pfam PF05552 Conserved TM helix 21 69 1.0E-10 T 22-04-2016 IPR008910 Conserved TM helix VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 Gene3D G3DSA:3.30.70.100 188 272 4.0E-33 T 22-04-2016 VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 Pfam PF00924 Mechanosensitive ion channel 77 274 8.9E-59 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 SUPERFAMILY SSF82861 33 118 7.45E-17 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VCLMA_RS02430 5a7056cc304f01d9e5e7fb55c70a22db 287 Gene3D G3DSA:2.30.30.60 135 184 1.6E-19 T 22-04-2016 VCLMA_RS11240 48e3263f8f898afa4dc7c0e0b9118929 246 PANTHER PTHR39455 1 246 2.0E-126 T 22-04-2016 VCLMA_RS11240 48e3263f8f898afa4dc7c0e0b9118929 246 PANTHER PTHR39455:SF1 1 246 2.0E-126 T 22-04-2016 VCLMA_RS11240 48e3263f8f898afa4dc7c0e0b9118929 246 Gene3D G3DSA:1.10.3900.10 12 172 2.8E-63 T 22-04-2016 VCLMA_RS11240 48e3263f8f898afa4dc7c0e0b9118929 246 Gene3D G3DSA:2.60.440.10 173 245 1.7E-32 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain VCLMA_RS11240 48e3263f8f898afa4dc7c0e0b9118929 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.264 T 22-04-2016 IPR009777 Cell division protein ZapD VCLMA_RS11240 48e3263f8f898afa4dc7c0e0b9118929 246 SUPERFAMILY SSF160950 1 245 1.57E-92 T 22-04-2016 VCLMA_RS11240 48e3263f8f898afa4dc7c0e0b9118929 246 Pfam PF07072 Protein of unknown function (DUF1342) 18 224 7.5E-76 T 22-04-2016 IPR009777 Cell division protein ZapD VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 PANTHER PTHR24096 1 471 1.7E-203 T 22-04-2016 VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 Pfam PF00501 AMP-binding enzyme 10 112 2.5E-12 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 Pfam PF00501 AMP-binding enzyme 123 376 1.3E-51 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 Gene3D G3DSA:3.40.50.980 3 141 9.0E-27 T 22-04-2016 VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 PANTHER PTHR24096:SF240 1 471 1.7E-203 T 22-04-2016 VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 Pfam PF13193 AMP-binding enzyme C-terminal domain 386 462 6.2E-13 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 ProSitePatterns PS00455 Putative AMP-binding domain signature. 132 143 - T 22-04-2016 IPR020845 AMP-binding, conserved site VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 Gene3D G3DSA:3.40.50.980 142 293 9.7E-31 T 22-04-2016 VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 SUPERFAMILY SSF56801 3 469 8.24E-100 T 22-04-2016 VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 Gene3D G3DSA:2.30.38.10 297 369 5.8E-15 T 22-04-2016 VCLMA_RS01200 eb48f0a5889476c642143b907feab0ae 471 Gene3D G3DSA:3.30.300.30 371 469 1.4E-22 T 22-04-2016 VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 SUPERFAMILY SSF53850 1 255 5.5E-70 T 22-04-2016 VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 Gene3D G3DSA:3.40.190.10 23 112 1.9E-45 T 22-04-2016 VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 Gene3D G3DSA:3.40.190.10 213 255 1.9E-45 T 22-04-2016 VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 PANTHER PTHR18966 18 251 7.5E-62 T 22-04-2016 VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 SMART SM00062 26 254 2.4E-67 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 Gene3D G3DSA:3.40.190.10 115 211 5.2E-25 T 22-04-2016 VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 SMART SM00079 26 253 4.5E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 PANTHER PTHR18966:SF152 18 251 7.5E-62 T 22-04-2016 VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 252 1.0E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS08550 b1e2032604b96673f6a30424ae79cd4c 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 251 2.7E-85 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 VCLMA_RS01985 a72d89977a716623ecdc901690957ddf 594 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 387 575 1.0E-63 T 22-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VCLMA_RS01985 a72d89977a716623ecdc901690957ddf 594 Pfam PF15864 Protein glycosylation ligase 174 199 2.1E-11 T 22-04-2016 IPR031726 Protein glycosylation ligase domain VCLMA_RS01985 a72d89977a716623ecdc901690957ddf 594 Pfam PF04932 O-Antigen ligase 221 366 2.0E-14 T 22-04-2016 IPR007016 O-antigen ligase-related VCLMA_RS01985 a72d89977a716623ecdc901690957ddf 594 ProSitePatterns PS00284 Serpins signature. 18 28 - T 22-04-2016 IPR023795 Serpin, conserved site VCLMA_RS07025 65805caad54b0c260e0fd0b4a6624571 218 PANTHER PTHR34227:SF4 11 207 1.1E-119 T 22-04-2016 VCLMA_RS07025 65805caad54b0c260e0fd0b4a6624571 218 PANTHER PTHR34227 11 207 1.1E-119 T 22-04-2016 VCLMA_RS07025 65805caad54b0c260e0fd0b4a6624571 218 Pfam PF02613 Nitrate reductase delta subunit 44 164 6.1E-34 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VCLMA_RS07025 65805caad54b0c260e0fd0b4a6624571 218 Gene3D G3DSA:1.10.3480.10 4 200 7.2E-56 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VCLMA_RS07025 65805caad54b0c260e0fd0b4a6624571 218 SUPERFAMILY SSF89155 9 199 3.01E-55 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VCLMA_RS11685 8657c9c8599e3dea4a8c0618a79ff3df 129 SUPERFAMILY SSF55298 2 128 1.32E-43 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VCLMA_RS11685 8657c9c8599e3dea4a8c0618a79ff3df 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 5.8E-52 T 22-04-2016 IPR006056 RidA family VCLMA_RS11685 8657c9c8599e3dea4a8c0618a79ff3df 129 PANTHER PTHR11803 1 128 3.8E-52 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VCLMA_RS11685 8657c9c8599e3dea4a8c0618a79ff3df 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 1.7E-43 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VCLMA_RS11685 8657c9c8599e3dea4a8c0618a79ff3df 129 Gene3D G3DSA:3.30.1330.40 5 128 1.3E-46 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VCLMA_RS11685 8657c9c8599e3dea4a8c0618a79ff3df 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 22-04-2016 IPR019897 RidA, conserved site VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 4.0E-31 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 1.2E-213 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 Gene3D G3DSA:3.10.20.70 3 105 4.0E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 PANTHER PTHR20852:SF15 1 138 7.7E-275 T 22-04-2016 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 PANTHER PTHR20852:SF15 160 469 7.7E-275 T 22-04-2016 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 SMART SM01230 102 379 6.7E-156 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 SUPERFAMILY SSF55931 102 468 2.26E-139 T 22-04-2016 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 PANTHER PTHR20852 1 138 7.7E-275 T 22-04-2016 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 PANTHER PTHR20852 160 469 7.7E-275 T 22-04-2016 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 4.5E-140 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 SUPERFAMILY SSF54368 3 100 1.19E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VCLMA_RS12795 c806869e2621819b0147f5eeee584439 469 Gene3D G3DSA:3.30.590.10 106 455 9.5E-142 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 VCLMA_RS01135 f6a1b68606448a883441a5e2e41dcf35 345 Gene3D G3DSA:3.40.50.2000 1 140 8.2E-55 T 22-04-2016 VCLMA_RS01135 f6a1b68606448a883441a5e2e41dcf35 345 PANTHER PTHR30160:SF7 1 344 5.7E-114 T 22-04-2016 VCLMA_RS01135 f6a1b68606448a883441a5e2e41dcf35 345 SUPERFAMILY SSF53756 1 343 1.37E-102 T 22-04-2016 VCLMA_RS01135 f6a1b68606448a883441a5e2e41dcf35 345 PANTHER PTHR30160 1 344 5.7E-114 T 22-04-2016 VCLMA_RS01135 f6a1b68606448a883441a5e2e41dcf35 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 321 2.3E-70 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VCLMA_RS01135 f6a1b68606448a883441a5e2e41dcf35 345 Gene3D G3DSA:3.40.50.2000 166 342 8.1E-58 T 22-04-2016 VCLMA_RS01135 f6a1b68606448a883441a5e2e41dcf35 345 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 340 5.8E-149 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 VCLMA_RS11625 2160dbf5c6d20dd7a9ca47ca9390f8da 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 346 1.6E-119 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VCLMA_RS11625 2160dbf5c6d20dd7a9ca47ca9390f8da 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 344 1.5E-69 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VCLMA_RS11625 2160dbf5c6d20dd7a9ca47ca9390f8da 366 PANTHER PTHR33529 2 366 9.3E-123 T 22-04-2016 VCLMA_RS11625 2160dbf5c6d20dd7a9ca47ca9390f8da 366 PANTHER PTHR33529:SF2 2 366 9.3E-123 T 22-04-2016 VCLMA_RS07625 2a262c5967b36189b6592e34b16b6f05 92 Pfam PF01386 Ribosomal L25p family 4 89 2.8E-23 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VCLMA_RS07625 2a262c5967b36189b6592e34b16b6f05 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 1.0E-48 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VCLMA_RS07625 2a262c5967b36189b6592e34b16b6f05 92 Gene3D G3DSA:2.40.240.10 1 92 6.4E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VCLMA_RS07625 2a262c5967b36189b6592e34b16b6f05 92 SUPERFAMILY SSF50715 1 92 5.23E-28 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VCLMA_RS07625 2a262c5967b36189b6592e34b16b6f05 92 PANTHER PTHR33284 1 92 3.1E-37 T 22-04-2016 VCLMA_RS07625 2a262c5967b36189b6592e34b16b6f05 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 25.881 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VCLMA_RS01090 4dc41727dc347023c31c176b759fb276 235 SUPERFAMILY SSF56112 37 192 4.32E-18 T 22-04-2016 IPR011009 Protein kinase-like domain VCLMA_RS01090 4dc41727dc347023c31c176b759fb276 235 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 2 234 43.281 T 22-04-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676|UniPathway: UPA00958 VCLMA_RS01090 4dc41727dc347023c31c176b759fb276 235 Gene3D G3DSA:1.10.510.10 145 221 5.3E-15 T 22-04-2016 VCLMA_RS01090 4dc41727dc347023c31c176b759fb276 235 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 212 2.7E-64 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 PANTHER PTHR10357:SF170 456 559 5.1E-269 T 22-04-2016 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 PANTHER PTHR10357:SF170 1 424 5.1E-269 T 22-04-2016 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 Pfam PF00128 Alpha amylase, catalytic domain 33 375 2.1E-129 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 PANTHER PTHR10357 456 559 5.1E-269 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 PANTHER PTHR10357 1 424 5.1E-269 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 SMART SM00642 18 419 2.3E-166 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 Gene3D G3DSA:3.20.20.80 180 478 9.8E-129 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 Gene3D G3DSA:3.20.20.80 7 109 9.8E-129 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 Gene3D G3DSA:3.90.400.10 110 179 5.5E-32 T 22-04-2016 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 10 556 1.6E-264 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 Gene3D G3DSA:2.60.40.1180 481 558 9.4E-16 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 SUPERFAMILY SSF51445 8 475 6.09E-163 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS04270 23405d8cf4ef8959046bbd8abdbdac34 562 SUPERFAMILY SSF51011 480 558 8.91E-14 T 22-04-2016 VCLMA_RS05540 ac517bc35452890501fee08e52460e71 290 Pfam PF02811 PHP domain 4 173 6.9E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 VCLMA_RS05540 ac517bc35452890501fee08e52460e71 290 SUPERFAMILY SSF89550 165 275 6.8E-53 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VCLMA_RS05540 ac517bc35452890501fee08e52460e71 290 SUPERFAMILY SSF89550 1 83 6.8E-53 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 VCLMA_RS05540 ac517bc35452890501fee08e52460e71 290 PANTHER PTHR30007 1 275 5.7E-107 T 22-04-2016 VCLMA_RS05540 ac517bc35452890501fee08e52460e71 290 Gene3D G3DSA:3.20.20.140 1 88 2.4E-43 T 22-04-2016 VCLMA_RS05540 ac517bc35452890501fee08e52460e71 290 Gene3D G3DSA:3.20.20.140 157 261 2.4E-43 T 22-04-2016 VCLMA_RS05540 ac517bc35452890501fee08e52460e71 290 SMART SM00481 3 70 1.0E-15 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 VCLMA_RS05540 ac517bc35452890501fee08e52460e71 290 PANTHER PTHR30007:SF4 1 275 5.7E-107 T 22-04-2016 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 Gene3D G3DSA:3.60.20.10 13 435 9.8E-172 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 SUPERFAMILY SSF51395 434 1191 5.29E-251 T 22-04-2016 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 Pfam PF00310 Glutamine amidotransferases class-II 13 426 1.6E-178 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 Gene3D G3DSA:2.160.20.60 1211 1465 5.1E-95 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 SUPERFAMILY SSF69336 1212 1465 3.79E-88 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 Gene3D G3DSA:3.20.20.70 440 782 1.9E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 Pfam PF01493 GXGXG motif 1236 1420 2.7E-73 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 PANTHER PTHR11938:SF1 2 1477 0.0 T 22-04-2016 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 PANTHER PTHR11938 2 1477 0.0 T 22-04-2016 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 Pfam PF04898 Glutamate synthase central domain 458 738 1.2E-103 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 Pfam PF01645 Conserved region in glutamate synthase 794 1157 1.4E-152 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 Gene3D G3DSA:3.20.20.70 817 1190 1.3E-165 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS11005 271e1fce284fd9ba977dc7ae0d558fc9 1487 SUPERFAMILY SSF56235 13 429 4.07E-148 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 SUPERFAMILY SSF161098 577 667 1.5E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 SUPERFAMILY SSF161098 427 494 1.5E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 PANTHER PTHR30425:SF3 378 497 8.1E-161 T 22-04-2016 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 PANTHER PTHR30425:SF3 562 731 8.1E-161 T 22-04-2016 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 PANTHER PTHR30425:SF3 3 52 8.1E-161 T 22-04-2016 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 PANTHER PTHR30425 378 497 8.1E-161 T 22-04-2016 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 PANTHER PTHR30425 562 731 8.1E-161 T 22-04-2016 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 PANTHER PTHR30425 3 52 8.1E-161 T 22-04-2016 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 449 725 6.3E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 Gene3D G3DSA:1.10.3720.10 34 54 3.7E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 Gene3D G3DSA:1.10.3720.10 413 493 3.7E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 Gene3D G3DSA:1.10.3720.10 569 729 3.7E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03530 a76753941b926b2a1dd776b0d0582b8f 731 SUPERFAMILY SSF50969 86 395 2.59E-7 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 34.209 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 SMART SM00962 100 296 3.4E-117 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 PANTHER PTHR11564 1 435 3.2E-274 T 22-04-2016 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 SUPERFAMILY SSF47446 329 430 1.96E-38 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 Gene3D G3DSA:1.10.260.30 329 431 1.5E-41 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 Gene3D G3DSA:3.40.50.300 93 297 7.1E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 7.9E-180 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 Gene3D G3DSA:1.20.120.140 2 89 2.1E-34 T 22-04-2016 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 PANTHER PTHR11564:SF7 1 435 3.2E-274 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 SMART SM00382 99 301 1.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.4E-21 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 Pfam PF02978 Signal peptide binding domain 329 427 4.9E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 SUPERFAMILY SSF52540 42 353 9.03E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 SMART SM00963 1 86 3.9E-36 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS02740 26bb8a7e689589bc406210532755a81f 475 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 2.8E-75 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 VCLMA_RS12775 291f51503c9b8b2eed8d49ee8a2eb839 297 PIRSF PIRSF035875 1 295 5.5E-54 T 22-04-2016 IPR017039 Virulence factor BrkB VCLMA_RS12775 291f51503c9b8b2eed8d49ee8a2eb839 297 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 17 275 1.2E-80 T 22-04-2016 IPR017039 Virulence factor BrkB VCLMA_RS12775 291f51503c9b8b2eed8d49ee8a2eb839 297 PANTHER PTHR30213:SF0 9 295 1.6E-109 T 22-04-2016 VCLMA_RS12775 291f51503c9b8b2eed8d49ee8a2eb839 297 Pfam PF03631 Virulence factor BrkB 28 276 3.7E-60 T 22-04-2016 IPR017039 Virulence factor BrkB VCLMA_RS12775 291f51503c9b8b2eed8d49ee8a2eb839 297 PANTHER PTHR30213 9 295 1.6E-109 T 22-04-2016 VCLMA_RS12775 291f51503c9b8b2eed8d49ee8a2eb839 297 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 16 294 23.698 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial VCLMA_RS00275 03949b4eb48d294d7d364f857cef13dc 91 SUPERFAMILY SSF160272 1 86 5.62E-30 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 VCLMA_RS00275 03949b4eb48d294d7d364f857cef13dc 91 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 9.1E-26 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 VCLMA_RS00275 03949b4eb48d294d7d364f857cef13dc 91 Gene3D G3DSA:3.30.160.140 1 88 1.4E-35 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 SUPERFAMILY SSF52172 3 184 1.42E-43 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 Gene3D G3DSA:3.40.50.2300 2 124 5.0E-42 T 22-04-2016 VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 Gene3D G3DSA:1.10.10.10 129 227 3.3E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.2E-113 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 PANTHER PTHR26402 3 225 6.3E-153 T 22-04-2016 VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 SMART SM00862 150 225 2.0E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 Pfam PF00072 Response regulator receiver domain 5 116 4.8E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.1E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 PANTHER PTHR26402:SF576 3 225 6.3E-153 T 22-04-2016 VCLMA_RS03505 eac7956e0dec48961869aa1607f0ba72 229 SMART SM00448 3 116 3.0E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 Pfam PF09190 DALR domain 341 402 9.2E-25 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-29 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 Gene3D G3DSA:1.20.120.640 306 392 1.2E-28 T 22-04-2016 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 PANTHER PTHR10890 1 458 9.9E-257 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 Gene3D G3DSA:3.40.50.620 21 305 3.6E-113 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 458 2.2E-192 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 3.3E-142 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 SUPERFAMILY SSF47323 316 458 5.1E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 SUPERFAMILY SSF52374 1 313 2.68E-103 T 22-04-2016 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 459 39.161 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 VCLMA_RS08475 7173a795877512ea7ff85773845ac4be 459 SMART SM00840 341 402 1.8E-27 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VCLMA_RS06215 74415123fba1251a0a5a1884bef3e604 158 SMART SM00448 4 125 1.1E-11 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06215 74415123fba1251a0a5a1884bef3e604 158 Gene3D G3DSA:3.40.50.2300 4 133 6.7E-22 T 22-04-2016 VCLMA_RS06215 74415123fba1251a0a5a1884bef3e604 158 PANTHER PTHR26402:SF515 4 134 1.0E-69 T 22-04-2016 VCLMA_RS06215 74415123fba1251a0a5a1884bef3e604 158 PANTHER PTHR26402 4 134 1.0E-69 T 22-04-2016 VCLMA_RS06215 74415123fba1251a0a5a1884bef3e604 158 SUPERFAMILY SSF52172 1 133 1.04E-21 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS06215 74415123fba1251a0a5a1884bef3e604 158 Pfam PF00072 Response regulator receiver domain 6 125 1.8E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.1E-46 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.757 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 PANTHER PTHR11880 1 92 7.1E-58 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 SUPERFAMILY SSF54570 3 84 1.01E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 PIRSF PIRSF002144 1 92 7.3E-32 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 Gene3D G3DSA:3.30.860.10 1 91 2.8E-41 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.9E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.9E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.9E-25 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12070 e27e0493fa345e5c0619c92bb100427c 92 Pfam PF00203 Ribosomal protein S19 3 83 2.9E-37 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PANTHER PTHR11014 334 490 1.8E-208 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PANTHER PTHR11014:SF54 334 490 1.8E-208 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 Pfam PF01546 Peptidase family M20/M25/M40 77 472 4.4E-21 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 14 486 8.7E-185 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PANTHER PTHR11014 208 283 1.8E-208 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PANTHER PTHR11014 1 189 1.8E-208 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PANTHER PTHR11014:SF54 1 189 1.8E-208 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PIRSF PIRSF016599 5 489 5.3E-224 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PANTHER PTHR11014:SF54 208 283 1.8E-208 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 Gene3D G3DSA:3.40.630.10 7 185 1.2E-107 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 Gene3D G3DSA:3.40.630.10 401 486 1.2E-107 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 Pfam PF07687 Peptidase dimerisation domain 212 296 2.3E-7 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 SUPERFAMILY SSF53187 401 486 2.41E-63 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 SUPERFAMILY SSF53187 15 186 2.41E-63 T 22-04-2016 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 4.3E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 4.3E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 4.3E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 4.3E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 4.3E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 4.3E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 4.3E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 4.3E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS10585 e0fdc05eb4829a5c8d41c0a3c3cb775f 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 4.3E-89 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 5.4E-56 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 SUPERFAMILY SSF52518 358 545 7.51E-64 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 Gene3D G3DSA:3.40.50.970 345 546 3.0E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 Gene3D G3DSA:3.40.50.970 1 173 2.7E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.3E-209 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 3.3E-47 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 SUPERFAMILY SSF52518 1 177 3.21E-61 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 PANTHER PTHR18968 1 546 3.4E-258 T 22-04-2016 VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 Gene3D G3DSA:3.40.50.1220 176 340 5.0E-55 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 SUPERFAMILY SSF52467 181 341 4.58E-56 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 322 9.8E-40 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VCLMA_RS00150 fe36d906e24db9d5155180ea1dafac87 548 PANTHER PTHR18968:SF116 1 546 3.4E-258 T 22-04-2016 VCLMA_RS07545 41d21b3ccdfeaab8742bda34674ed98f 377 Gene3D G3DSA:2.40.37.10 237 348 7.9E-14 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VCLMA_RS07545 41d21b3ccdfeaab8742bda34674ed98f 377 PIRSF PIRSF038941 1 372 5.1E-130 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VCLMA_RS07545 41d21b3ccdfeaab8742bda34674ed98f 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 3.0E-172 T 22-04-2016 IPR005730 Carboxynorspermidine decarboxylase KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VCLMA_RS07545 41d21b3ccdfeaab8742bda34674ed98f 377 PANTHER PTHR11482 1 377 2.0E-205 T 22-04-2016 VCLMA_RS07545 41d21b3ccdfeaab8742bda34674ed98f 377 Gene3D G3DSA:3.20.20.10 25 236 5.3E-18 T 22-04-2016 IPR029066 PLP-binding barrel VCLMA_RS07545 41d21b3ccdfeaab8742bda34674ed98f 377 SUPERFAMILY SSF51419 14 242 4.49E-43 T 22-04-2016 IPR029066 PLP-binding barrel VCLMA_RS07545 41d21b3ccdfeaab8742bda34674ed98f 377 PANTHER PTHR11482:SF38 1 377 2.0E-205 T 22-04-2016 VCLMA_RS07545 41d21b3ccdfeaab8742bda34674ed98f 377 SUPERFAMILY SSF50621 212 361 7.53E-24 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 Pfam PF00472 RF-1 domain 218 323 1.2E-41 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 SMART SM00937 67 180 6.5E-69 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 Gene3D G3DSA:1.20.58.410 7 94 2.6E-24 T 22-04-2016 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 PANTHER PTHR11075:SF9 1 358 1.1E-181 T 22-04-2016 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 SUPERFAMILY SSF75620 12 355 1.02E-137 T 22-04-2016 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.795 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 Gene3D G3DSA:3.30.160.20 217 291 1.9E-36 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 PANTHER PTHR11075 1 358 1.1E-181 T 22-04-2016 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 Pfam PF03462 PCRF domain 13 205 1.6E-76 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VCLMA_RS10030 febc3d0ed809fe34700718f9bf3ddc3d 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 359 5.5E-172 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VCLMA_RS06955 230f1a297c2a50d34b3a65b92c64fe29 414 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 12 405 3.0E-104 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 VCLMA_RS06955 230f1a297c2a50d34b3a65b92c64fe29 414 Pfam PF04403 Paraquat-inducible protein A 252 406 1.1E-49 T 22-04-2016 IPR007498 Paraquat-inducible protein A VCLMA_RS06955 230f1a297c2a50d34b3a65b92c64fe29 414 Pfam PF04403 Paraquat-inducible protein A 58 208 3.1E-38 T 22-04-2016 IPR007498 Paraquat-inducible protein A VCLMA_RS06955 230f1a297c2a50d34b3a65b92c64fe29 414 PANTHER PTHR30462 9 414 1.5E-225 T 22-04-2016 VCLMA_RS06955 230f1a297c2a50d34b3a65b92c64fe29 414 PANTHER PTHR30462:SF1 9 414 1.5E-225 T 22-04-2016 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 Gene3D G3DSA:3.90.226.10 337 530 2.1E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 Gene3D G3DSA:3.90.226.10 642 662 2.1E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 Gene3D G3DSA:2.30.42.10 253 336 9.2E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 SMART SM00245 327 528 6.8E-68 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 SMART SM00228 247 324 5.8E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 Pfam PF08180 B melanoma antigen family 9 36 1.3E-9 T 22-04-2016 IPR012530 B melanoma antigen VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 PANTHER PTHR32060 7 601 0.0 T 22-04-2016 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 Pfam PF03572 Peptidase family S41 357 526 1.4E-51 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 196 548 7.1E-112 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 SUPERFAMILY SSF50156 218 338 3.71E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 SUPERFAMILY SSF52096 351 532 5.63E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 SUPERFAMILY SSF52096 167 265 5.63E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 663 3.0E-41 T 22-04-2016 IPR020992 Tail specific protease, C-terminal VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 Gene3D G3DSA:3.30.750.44 177 252 3.5E-5 T 22-04-2016 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 321 2.6E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS06935 8681ce169cbe057592deaef62e721b9a 665 PANTHER PTHR32060:SF11 7 601 0.0 T 22-04-2016 VCLMA_RS02995 ba14507a7fe2e2c967f372d49d4dfcd1 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS02995 ba14507a7fe2e2c967f372d49d4dfcd1 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.3E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS02995 ba14507a7fe2e2c967f372d49d4dfcd1 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 9.9E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS02995 ba14507a7fe2e2c967f372d49d4dfcd1 331 Pfam PF00005 ABC transporter 35 192 1.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS02995 ba14507a7fe2e2c967f372d49d4dfcd1 331 SMART SM00382 43 241 5.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS02995 ba14507a7fe2e2c967f372d49d4dfcd1 331 SUPERFAMILY SSF52540 10 262 1.06E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02995 ba14507a7fe2e2c967f372d49d4dfcd1 331 PANTHER PTHR24220 11 331 3.3E-116 T 22-04-2016 VCLMA_RS02995 ba14507a7fe2e2c967f372d49d4dfcd1 331 Gene3D G3DSA:3.40.50.300 10 265 2.9E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02995 ba14507a7fe2e2c967f372d49d4dfcd1 331 PANTHER PTHR24220:SF81 11 331 3.3E-116 T 22-04-2016 VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 Gene3D G3DSA:1.10.8.210 150 210 1.6E-18 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 SUPERFAMILY SSF75615 109 210 3.66E-22 T 22-04-2016 VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 Gene3D G3DSA:3.30.160.110 114 148 1.4E-15 T 22-04-2016 VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 SUPERFAMILY SSF51735 1 113 4.46E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 Gene3D G3DSA:3.40.50.720 1 113 3.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 SUPERFAMILY SSF53790 224 289 7.52E-5 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 Gene3D G3DSA:3.40.1010.10 224 288 1.0E-4 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 Pfam PF13241 Putative NAD(P)-binding 6 116 1.0E-31 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 194 7.5E-59 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 Pfam PF10414 Sirohaem synthase dimerisation region 152 206 8.9E-12 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 VCLMA_RS06435 b59891d0c63ad9129dd232512855aad8 312 PANTHER PTHR35330 1 229 2.0E-58 T 22-04-2016 VCLMA_RS00535 52990625c56f622d28f89f40bbd732c5 142 Gene3D G3DSA:3.40.630.30 8 140 1.1E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS00535 52990625c56f622d28f89f40bbd732c5 142 SUPERFAMILY SSF55729 1 127 2.96E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS00535 52990625c56f622d28f89f40bbd732c5 142 Pfam PF13673 Acetyltransferase (GNAT) domain 16 106 2.9E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS00470 77cdbb847c62d125caa57d9e107a7d75 270 PIRSF PIRSF028177 3 270 7.0E-92 T 22-04-2016 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00174 VCLMA_RS00470 77cdbb847c62d125caa57d9e107a7d75 270 PANTHER PTHR13600:SF19 1 190 1.0E-59 T 22-04-2016 VCLMA_RS00470 77cdbb847c62d125caa57d9e107a7d75 270 Pfam PF04072 Leucine carboxyl methyltransferase 70 128 9.0E-5 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VCLMA_RS00470 77cdbb847c62d125caa57d9e107a7d75 270 PANTHER PTHR13600 1 190 1.0E-59 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VCLMA_RS00470 77cdbb847c62d125caa57d9e107a7d75 270 Gene3D G3DSA:3.40.50.150 17 252 2.9E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00470 77cdbb847c62d125caa57d9e107a7d75 270 SUPERFAMILY SSF53335 18 252 2.49E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 545 1.2E-186 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.1E-28 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 PANTHER PTHR11751:SF406 510 630 2.4E-252 T 22-04-2016 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 PANTHER PTHR11751:SF406 482 490 2.4E-252 T 22-04-2016 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 PANTHER PTHR11751:SF406 131 459 2.4E-252 T 22-04-2016 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 PANTHER PTHR11751 510 630 2.4E-252 T 22-04-2016 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 PANTHER PTHR11751 482 490 2.4E-252 T 22-04-2016 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 PANTHER PTHR11751 131 459 2.4E-252 T 22-04-2016 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 Gene3D G3DSA:3.40.640.10 130 423 5.3E-100 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 PIRSF PIRSF009393 1 711 8.6E-288 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 SUPERFAMILY SSF53383 130 562 2.46E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.9E-44 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 Gene3D G3DSA:3.90.100.10 588 709 7.5E-36 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 SUPERFAMILY SSF55904 567 708 1.57E-42 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VCLMA_RS01350 2edd08709a385cc17791e421f2e57d29 711 Gene3D G3DSA:3.90.1150.10 425 587 1.9E-66 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS03800 f3f8094a559678bbd1ce4e8ed118780f 279 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS03800 f3f8094a559678bbd1ce4e8ed118780f 279 Pfam PF00005 ABC transporter 37 184 8.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS03800 f3f8094a559678bbd1ce4e8ed118780f 279 Gene3D G3DSA:3.40.50.300 15 248 3.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03800 f3f8094a559678bbd1ce4e8ed118780f 279 PANTHER PTHR24220 22 277 8.4E-159 T 22-04-2016 VCLMA_RS03800 f3f8094a559678bbd1ce4e8ed118780f 279 PANTHER PTHR24220:SF438 22 277 8.4E-159 T 22-04-2016 VCLMA_RS03800 f3f8094a559678bbd1ce4e8ed118780f 279 SMART SM00382 45 233 4.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03800 f3f8094a559678bbd1ce4e8ed118780f 279 SUPERFAMILY SSF52540 20 246 3.03E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03785 f3f8094a559678bbd1ce4e8ed118780f 279 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS03785 f3f8094a559678bbd1ce4e8ed118780f 279 Pfam PF00005 ABC transporter 37 184 8.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS03785 f3f8094a559678bbd1ce4e8ed118780f 279 Gene3D G3DSA:3.40.50.300 15 248 3.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03785 f3f8094a559678bbd1ce4e8ed118780f 279 PANTHER PTHR24220 22 277 8.4E-159 T 22-04-2016 VCLMA_RS03785 f3f8094a559678bbd1ce4e8ed118780f 279 PANTHER PTHR24220:SF438 22 277 8.4E-159 T 22-04-2016 VCLMA_RS03785 f3f8094a559678bbd1ce4e8ed118780f 279 SMART SM00382 45 233 4.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03785 f3f8094a559678bbd1ce4e8ed118780f 279 SUPERFAMILY SSF52540 20 246 3.03E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 Pfam PF00072 Response regulator receiver domain 13 122 1.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 Gene3D G3DSA:3.40.50.2300 11 136 5.6E-35 T 22-04-2016 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 SUPERFAMILY SSF52172 12 190 2.7E-41 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 PANTHER PTHR32071:SF33 13 469 4.1E-234 T 22-04-2016 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 PANTHER PTHR32071 13 469 4.1E-234 T 22-04-2016 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 Gene3D G3DSA:1.10.8.60 320 392 1.1E-20 T 22-04-2016 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 SUPERFAMILY SSF52540 146 389 7.92E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 Gene3D G3DSA:1.10.10.60 413 456 2.5E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 SMART SM00382 166 309 2.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 Pfam PF02954 Bacterial regulatory protein, Fis family 418 456 1.0E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 SMART SM00448 11 122 2.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 Gene3D G3DSA:3.40.50.300 143 318 5.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 SUPERFAMILY SSF46689 359 457 6.57E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS04785 ac70fdc6e8318a9e535bb41c8f71d497 469 Pfam PF00158 Sigma-54 interaction domain 147 312 7.3E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 1.9E-13 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.2E-44 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 PANTHER PTHR15184:SF3 1 496 1.2E-291 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.4E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 SUPERFAMILY SSF52540 96 381 3.54E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 SUPERFAMILY SSF50615 10 94 5.69E-26 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 4.4E-252 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 Gene3D G3DSA:1.20.150.20 383 510 6.9E-47 T 22-04-2016 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 PANTHER PTHR15184 1 496 1.2E-291 T 22-04-2016 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.766 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 Gene3D G3DSA:2.40.30.20 1 93 2.4E-29 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 Gene3D G3DSA:3.40.50.300 94 382 2.4E-114 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12955 a27a017758a0ec43686328536a8e8faa 513 SUPERFAMILY SSF47917 383 511 3.4E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 230 246 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 294 3.7E-57 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 38 325 1.9E-23 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 SUPERFAMILY SSF51735 108 295 1.12E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 PANTHER PTHR10996:SF91 1 325 1.7E-118 T 22-04-2016 VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 201 223 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 Gene3D G3DSA:3.40.50.720 116 294 2.2E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 SUPERFAMILY SSF52283 36 127 9.83E-30 T 22-04-2016 VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 PANTHER PTHR10996 1 325 1.7E-118 T 22-04-2016 VCLMA_RS11645 e527d504e5c49b951da4cbda0c345554 325 Gene3D G3DSA:3.40.50.720 32 115 5.3E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS02335 f9f5263f44f0e28ac85c613905463a01 345 Pfam PF00437 Type II/IV secretion system protein 12 270 5.3E-46 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VCLMA_RS02335 f9f5263f44f0e28ac85c613905463a01 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 8.1E-151 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 VCLMA_RS02335 f9f5263f44f0e28ac85c613905463a01 345 Gene3D G3DSA:3.40.50.300 100 338 4.5E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02335 f9f5263f44f0e28ac85c613905463a01 345 PANTHER PTHR30486 1 339 5.3E-197 T 22-04-2016 VCLMA_RS02335 f9f5263f44f0e28ac85c613905463a01 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VCLMA_RS02335 f9f5263f44f0e28ac85c613905463a01 345 PANTHER PTHR30486:SF6 1 339 5.3E-197 T 22-04-2016 VCLMA_RS02335 f9f5263f44f0e28ac85c613905463a01 345 SUPERFAMILY SSF52540 5 335 2.85E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02335 f9f5263f44f0e28ac85c613905463a01 345 SMART SM00382 122 247 0.0068 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SUPERFAMILY SSF52777 193 442 2.0E-31 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SUPERFAMILY SSF52777 1953 2151 5.11E-32 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Pfam PF00668 Condensation domain 8 305 5.5E-31 T 22-04-2016 IPR001242 Condensation domain VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Pfam PF00668 Condensation domain 1951 2247 5.6E-37 T 22-04-2016 IPR001242 Condensation domain VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Pfam PF00668 Condensation domain 458 725 3.5E-15 T 22-04-2016 IPR001242 Condensation domain VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Pfam PF00668 Condensation domain 1425 1573 1.2E-6 T 22-04-2016 IPR001242 Condensation domain VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Pfam PF00501 AMP-binding enzyme 911 1304 1.3E-76 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Gene3D G3DSA:1.10.1200.10 1862 1930 6.7E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Gene3D G3DSA:3.40.50.980 1053 1215 6.8E-37 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SMART SM00823 Phosphopantetheine attachment site 1866 1935 0.0078 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SUPERFAMILY SSF52777 1426 1579 9.45E-19 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 926 1328 6.0E-105 T 22-04-2016 IPR010071 Amino acid adenylation domain VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SUPERFAMILY SSF52777 642 869 9.0E-20 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SUPERFAMILY SSF47336 1862 1929 1.96E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1890 1905 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Gene3D G3DSA:3.30.300.30 1301 1403 7.9E-26 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SUPERFAMILY SSF52777 8 184 9.67E-20 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SUPERFAMILY SSF56801 899 1400 4.45E-122 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 PANTHER PTHR24095 910 1397 2.1E-198 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 PANTHER PTHR24095 1851 2362 2.1E-198 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 PANTHER PTHR24095 8 479 2.1E-198 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 PANTHER PTHR24095:SF137 910 1397 2.1E-198 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 PANTHER PTHR24095:SF137 8 479 2.1E-198 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 PANTHER PTHR24095:SF137 1851 2362 2.1E-198 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Gene3D G3DSA:3.40.50.980 901 1052 3.0E-34 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SUPERFAMILY SSF52777 2139 2392 5.11E-28 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Pfam PF08415 Nonribosomal peptide synthase 770 822 5.0E-6 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Pfam PF08415 Nonribosomal peptide synthase 329 387 1.2E-11 T 22-04-2016 IPR013624 Non-ribosomal peptide synthetase VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 SUPERFAMILY SSF52777 457 651 1.56E-13 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1047 1058 - T 22-04-2016 IPR020845 AMP-binding, conserved site VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Pfam PF00550 Phosphopantetheine attachment site 1869 1929 2.5E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Gene3D G3DSA:2.30.38.10 1216 1293 7.5E-16 T 22-04-2016 VCLMA_RS10255 956210fb066841a0143ead21991351c8 2417 Pfam PF13193 AMP-binding enzyme C-terminal domain 1313 1387 3.4E-7 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VCLMA_RS05940 9581a1fb3f52782941d0f8a8674a21f2 299 Gene3D G3DSA:1.10.10.60 245 294 8.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS05940 9581a1fb3f52782941d0f8a8674a21f2 299 SUPERFAMILY SSF46689 191 242 2.9E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS05940 9581a1fb3f52782941d0f8a8674a21f2 299 SMART SM00342 208 291 2.3E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS05940 9581a1fb3f52782941d0f8a8674a21f2 299 SUPERFAMILY SSF46689 245 295 5.82E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS05940 9581a1fb3f52782941d0f8a8674a21f2 299 Pfam PF12833 Helix-turn-helix domain 214 293 1.4E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS05940 9581a1fb3f52782941d0f8a8674a21f2 299 PANTHER PTHR11019 25 299 5.0E-116 T 22-04-2016 VCLMA_RS05940 9581a1fb3f52782941d0f8a8674a21f2 299 PANTHER PTHR11019:SF123 25 299 5.0E-116 T 22-04-2016 VCLMA_RS05940 9581a1fb3f52782941d0f8a8674a21f2 299 Gene3D G3DSA:1.10.10.60 188 244 9.9E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 SUPERFAMILY SSF82866 790 1026 5.1E-49 T 22-04-2016 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 SUPERFAMILY SSF82866 289 491 8.5E-40 T 22-04-2016 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 Gene3D G3DSA:3.30.2090.10 185 264 3.1E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 Pfam PF00873 AcrB/AcrD/AcrF family 6 1021 5.0E-172 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 1.2E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 Gene3D G3DSA:1.20.1640.10 284 499 2.4E-50 T 22-04-2016 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 Gene3D G3DSA:1.10.3850.10 795 1024 2.0E-55 T 22-04-2016 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 SUPERFAMILY SSF82714 707 786 1.7E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 Gene3D G3DSA:3.30.70.1430 41 135 2.7E-24 T 22-04-2016 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 SUPERFAMILY SSF82693 41 132 1.83E-22 T 22-04-2016 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 Gene3D G3DSA:3.30.2090.10 707 786 4.4E-6 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 PANTHER PTHR32063:SF31 1 1032 0.0 T 22-04-2016 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 PANTHER PTHR32063 1 1032 0.0 T 22-04-2016 VCLMA_RS03060 4ff10d5ad7644692a26c66837a792744 1039 SUPERFAMILY SSF82714 184 264 3.79E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 Pfam PF00158 Sigma-54 interaction domain 146 305 4.4E-40 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 Gene3D G3DSA:1.10.10.60 384 438 5.4E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 PANTHER PTHR32071 27 443 5.4E-247 T 22-04-2016 VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 8.6E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 Gene3D G3DSA:3.40.50.300 144 311 3.6E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 SMART SM00382 166 303 4.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 5.6E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 5.6E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 SUPERFAMILY SSF46689 350 438 1.87E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 SUPERFAMILY SSF52540 146 375 2.18E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 SUPERFAMILY SSF52172 26 190 6.76E-7 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 Gene3D G3DSA:1.10.8.60 312 383 7.2E-23 T 22-04-2016 VCLMA_RS03250 ac6b662decbd766941bb02a7708429fa 444 PANTHER PTHR32071:SF34 27 443 5.4E-247 T 22-04-2016 VCLMA_RS00585 2b7a635e84d04b71cfd25ec804fa702f 399 PANTHER PTHR38043 23 399 3.0E-103 T 22-04-2016 VCLMA_RS00585 2b7a635e84d04b71cfd25ec804fa702f 399 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 59 388 1.8E-103 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VCLMA_RS00760 cdb849a3b478645511f62ba711ddfaa5 304 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 8 303 1.0E-151 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VCLMA_RS00760 cdb849a3b478645511f62ba711ddfaa5 304 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 2 303 33.598 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VCLMA_RS00760 cdb849a3b478645511f62ba711ddfaa5 304 Gene3D G3DSA:3.40.50.150 90 302 1.5E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00760 cdb849a3b478645511f62ba711ddfaa5 304 SUPERFAMILY SSF53335 11 302 1.34E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00760 cdb849a3b478645511f62ba711ddfaa5 304 PANTHER PTHR11061 12 304 2.2E-193 T 22-04-2016 VCLMA_RS00760 cdb849a3b478645511f62ba711ddfaa5 304 PANTHER PTHR11061:SF25 12 304 2.2E-193 T 22-04-2016 VCLMA_RS00760 cdb849a3b478645511f62ba711ddfaa5 304 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 285 295 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site VCLMA_RS00760 cdb849a3b478645511f62ba711ddfaa5 304 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 236 265 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site VCLMA_RS00760 cdb849a3b478645511f62ba711ddfaa5 304 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 8 303 6.9E-151 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 5.2E-28 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 PANTHER PTHR13822 1 140 8.8E-44 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 Gene3D G3DSA:1.20.5.440 93 135 1.9E-22 T 22-04-2016 VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 134 4.0E-42 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 SUPERFAMILY SSF51344 5 87 7.06E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.433 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 SUPERFAMILY SSF46604 89 138 3.66E-14 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 Gene3D G3DSA:2.60.15.10 5 92 2.5E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 1.1E-11 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VCLMA_RS12940 ec44c642affa0bad021ec655b588dc3b 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 2.0E-40 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS04945 e3127fc43e648ebd328d119ce751ee0f 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 6.3E-75 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VCLMA_RS04945 e3127fc43e648ebd328d119ce751ee0f 181 Gene3D G3DSA:3.40.50.2020 5 179 4.4E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS04945 e3127fc43e648ebd328d119ce751ee0f 181 SUPERFAMILY SSF53271 11 178 7.95E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS04945 e3127fc43e648ebd328d119ce751ee0f 181 Pfam PF00156 Phosphoribosyl transferase domain 30 154 1.7E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VCLMA_RS04945 e3127fc43e648ebd328d119ce751ee0f 181 PANTHER PTHR32315 1 181 8.3E-84 T 22-04-2016 VCLMA_RS04945 e3127fc43e648ebd328d119ce751ee0f 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 38.659 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 VCLMA_RS11225 8c74a616e647547d93e5cd6b7ca4a619 408 Pfam PF00482 Type II secretion system (T2SS), protein F 277 399 1.9E-27 T 22-04-2016 IPR018076 Type II secretion system F domain VCLMA_RS11225 8c74a616e647547d93e5cd6b7ca4a619 408 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 3.1E-31 T 22-04-2016 IPR018076 Type II secretion system F domain VCLMA_RS11225 8c74a616e647547d93e5cd6b7ca4a619 408 PANTHER PTHR30012 10 408 2.7E-168 T 22-04-2016 VCLMA_RS11225 8c74a616e647547d93e5cd6b7ca4a619 408 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VCLMA_RS11225 8c74a616e647547d93e5cd6b7ca4a619 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 372 386 5.6E-20 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS11225 8c74a616e647547d93e5cd6b7ca4a619 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 388 407 5.6E-20 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS11225 8c74a616e647547d93e5cd6b7ca4a619 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 5.6E-20 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS11225 8c74a616e647547d93e5cd6b7ca4a619 408 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 5.6E-20 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS11225 8c74a616e647547d93e5cd6b7ca4a619 408 PANTHER PTHR30012:SF0 10 408 2.7E-168 T 22-04-2016 VCLMA_RS07185 d91b38eb7c33e77d6685f709a3d6a3ab 434 Gene3D G3DSA:3.40.190.10 146 353 3.4E-35 T 22-04-2016 VCLMA_RS07185 d91b38eb7c33e77d6685f709a3d6a3ab 434 PANTHER PTHR30061:SF7 1 431 3.8E-154 T 22-04-2016 VCLMA_RS07185 d91b38eb7c33e77d6685f709a3d6a3ab 434 PANTHER PTHR30061 1 431 3.8E-154 T 22-04-2016 VCLMA_RS07185 d91b38eb7c33e77d6685f709a3d6a3ab 434 SUPERFAMILY SSF53850 26 421 4.29E-69 T 22-04-2016 VCLMA_RS07185 d91b38eb7c33e77d6685f709a3d6a3ab 434 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 1.5E-37 T 22-04-2016 VCLMA_RS07885 1277727f7d96158be3911cabbf34f839 394 PANTHER PTHR30333 1 394 9.4E-296 T 22-04-2016 VCLMA_RS07885 1277727f7d96158be3911cabbf34f839 394 Gene3D G3DSA:1.10.3820.10 339 345 1.0E-28 T 22-04-2016 VCLMA_RS07885 1277727f7d96158be3911cabbf34f839 394 Gene3D G3DSA:1.10.3820.10 12 189 1.0E-28 T 22-04-2016 VCLMA_RS07885 1277727f7d96158be3911cabbf34f839 394 PIRSF PIRSF000014 1 394 2.6E-173 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VCLMA_RS07885 1277727f7d96158be3911cabbf34f839 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 187 5.2E-73 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal VCLMA_RS07885 1277727f7d96158be3911cabbf34f839 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 4.1E-206 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VCLMA_RS07885 1277727f7d96158be3911cabbf34f839 394 SUPERFAMILY SSF48695 12 187 5.44E-61 T 22-04-2016 IPR011031 Multihaem cytochrome VCLMA_RS07885 1277727f7d96158be3911cabbf34f839 394 PANTHER PTHR30333:SF1 1 394 9.4E-296 T 22-04-2016 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 SUPERFAMILY SSF55021 383 476 2.24E-21 T 22-04-2016 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 SUPERFAMILY SSF51735 463 636 7.22E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 SUPERFAMILY SSF55347 614 797 1.24E-50 T 22-04-2016 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 SUPERFAMILY SSF53633 1 294 6.15E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 8.8E-27 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 PANTHER PTHR21499:SF1 1 471 2.0E-182 T 22-04-2016 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 PANTHER PTHR21499 1 471 2.0E-182 T 22-04-2016 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 Gene3D G3DSA:3.40.50.720 466 635 4.9E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 PIRSF PIRSF000727 1 817 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 Pfam PF00742 Homoserine dehydrogenase 614 810 1.2E-49 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 Pfam PF13840 ACT domain 393 456 8.0E-7 T 22-04-2016 IPR027795 GATS-like ACT domain VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 Pfam PF01842 ACT domain 324 378 5.2E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 Gene3D G3DSA:3.30.360.10 636 791 1.9E-56 T 22-04-2016 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 SUPERFAMILY SSF55021 303 381 1.32E-20 T 22-04-2016 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 Pfam PF00696 Amino acid kinase family 2 284 2.4E-51 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 Gene3D G3DSA:3.40.1160.10 1 49 1.5E-66 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 Gene3D G3DSA:3.40.1160.10 111 298 1.5E-66 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS10955 475356a06589d6f53e0a39f3dc538320 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 6.0E-128 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 SMART SM00271 275 331 7.3E-4 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 PANTHER PTHR11102 279 288 1.1E-21 T 22-04-2016 VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 PANTHER PTHR11102 29 136 1.1E-21 T 22-04-2016 VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 SMART SM00671 70 105 2.1E-5 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 SMART SM00671 34 69 3.3E-10 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 SUPERFAMILY SSF81901 26 151 1.96E-20 T 22-04-2016 VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 SUPERFAMILY SSF46565 277 333 1.07E-13 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 Gene3D G3DSA:1.25.40.10 28 141 7.6E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 Gene3D G3DSA:1.10.287.110 272 335 1.4E-12 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 Pfam PF08238 Sel1 repeat 71 105 2.2E-5 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS05620 383e229e52f2488739f5b8157099948f 338 Pfam PF08238 Sel1 repeat 34 69 5.1E-10 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS10670 e3a8fba988d50d3a418652a85fd68145 376 Gene3D G3DSA:3.40.50.150 200 349 2.8E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS10670 e3a8fba988d50d3a418652a85fd68145 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VCLMA_RS10670 e3a8fba988d50d3a418652a85fd68145 376 PANTHER PTHR18895 82 375 3.3E-152 T 22-04-2016 VCLMA_RS10670 e3a8fba988d50d3a418652a85fd68145 376 PIRSF PIRSF037565 1 376 1.5E-171 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS10670 e3a8fba988d50d3a418652a85fd68145 376 PANTHER PTHR18895:SF6 82 375 3.3E-152 T 22-04-2016 VCLMA_RS10670 e3a8fba988d50d3a418652a85fd68145 376 SUPERFAMILY SSF53335 196 353 1.76E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS10670 e3a8fba988d50d3a418652a85fd68145 376 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 2 375 49.051 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS10670 e3a8fba988d50d3a418652a85fd68145 376 Pfam PF05175 Methyltransferase small domain 200 372 5.8E-52 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 SMART SM00228 253 335 8.3E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 Pfam PF13365 Trypsin-like peptidase domain 80 212 1.3E-27 T 22-04-2016 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 1.5E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 PRINTS PR00834 HtrA/DegQ protease family signature 205 222 1.5E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 PRINTS PR00834 HtrA/DegQ protease family signature 183 200 1.5E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 1.5E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 PRINTS PR00834 HtrA/DegQ protease family signature 293 305 1.5E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 PRINTS PR00834 HtrA/DegQ protease family signature 148 172 1.5E-45 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 PANTHER PTHR22939:SF93 1 347 8.5E-159 T 22-04-2016 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 Gene3D G3DSA:2.30.42.10 255 347 1.8E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 SUPERFAMILY SSF50494 41 262 1.12E-57 T 22-04-2016 IPR009003 Peptidase S1, PA clan VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 SUPERFAMILY SSF50156 236 343 8.57E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 Gene3D G3DSA:2.40.10.10 33 136 3.5E-33 T 22-04-2016 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 Gene3D G3DSA:2.40.10.10 142 254 4.3E-38 T 22-04-2016 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 PANTHER PTHR22939 1 347 8.5E-159 T 22-04-2016 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 348 3.6E-174 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VCLMA_RS02765 b189a0134323f715a9f09d68cfb59e1b 350 Pfam PF13180 PDZ domain 253 343 2.3E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 Pfam PF01238 Phosphomannose isomerase type I 11 358 5.6E-78 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PRINTS PR00714 Phosphomannose isomerase type I signature 230 245 1.7E-65 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PRINTS PR00714 Phosphomannose isomerase type I signature 12 30 1.7E-65 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PRINTS PR00714 Phosphomannose isomerase type I signature 265 284 1.7E-65 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PRINTS PR00714 Phosphomannose isomerase type I signature 88 109 1.7E-65 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PRINTS PR00714 Phosphomannose isomerase type I signature 284 303 1.7E-65 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PRINTS PR00714 Phosphomannose isomerase type I signature 133 156 1.7E-65 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PRINTS PR00714 Phosphomannose isomerase type I signature 40 55 1.7E-65 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PRINTS PR00714 Phosphomannose isomerase type I signature 246 265 1.7E-65 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 133 141 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PIRSF PIRSF001480 8 399 5.2E-98 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 9 390 1.0E-85 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 265 290 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 Gene3D G3DSA:1.10.441.10 148 241 3.6E-29 T 22-04-2016 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 Gene3D G3DSA:1.10.441.10 284 296 3.6E-29 T 22-04-2016 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PANTHER PTHR10309:SF0 5 398 1.9E-133 T 22-04-2016 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 PANTHER PTHR10309 5 398 1.9E-133 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 Gene3D G3DSA:2.60.120.10 297 384 2.4E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 SUPERFAMILY SSF51182 8 385 3.56E-100 T 22-04-2016 IPR011051 RmlC-like cupin domain VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 Gene3D G3DSA:2.60.120.10 14 147 1.2E-63 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS01295 a1a3efb5194c5869e16f4c5fd1f82374 399 Gene3D G3DSA:2.60.120.10 248 283 1.2E-63 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.3E-136 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 PANTHER PTHR11739 39 428 2.7E-210 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 PIRSF PIRSF001369 38 429 7.3E-174 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 422 1.5E-239 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 Gene3D G3DSA:1.10.580.10 52 280 4.9E-100 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 SUPERFAMILY SSF48256 4 428 8.24E-171 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 379 393 3.65E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 296 316 3.65E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 165 178 3.65E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 359 375 3.65E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 241 269 3.65E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 PRINTS PR00143 Citrate synthase signature 219 234 3.65E-55 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS09645 e1abdf197616de611b9481d051551c8b 429 Gene3D G3DSA:1.10.230.10 281 373 3.2E-44 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VCLMA_RS12905 ad534758168a46c7232c32a5f3febb19 485 PIRSF PIRSF006247 1 485 7.4E-179 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VCLMA_RS12905 ad534758168a46c7232c32a5f3febb19 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 1.2E-118 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VCLMA_RS12905 ad534758168a46c7232c32a5f3febb19 485 Pfam PF02386 Cation transport protein 39 477 5.5E-91 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VCLMA_RS12905 ad534758168a46c7232c32a5f3febb19 485 PANTHER PTHR32024 1 484 6.9E-273 T 22-04-2016 VCLMA_RS12905 ad534758168a46c7232c32a5f3febb19 485 PANTHER PTHR32024:SF2 1 484 6.9E-273 T 22-04-2016 VCLMA_RS05450 512cb5004ac3705da71521db426a8730 421 Pfam PF06097 Bacterial protein of unknown function (DUF945) 5 409 2.9E-44 T 22-04-2016 IPR010352 Protein of unknown function DUF945 VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 PANTHER PTHR11207 1 222 1.5E-103 T 22-04-2016 VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 Gene3D G3DSA:1.10.1520.10 5 147 5.1E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 Pfam PF14622 Ribonuclease-III-like 19 139 7.9E-35 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 5.2E-16 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 7.1E-76 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 SUPERFAMILY SSF54768 108 222 3.77E-29 T 22-04-2016 VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 SMART SM00358 155 223 3.1E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 Gene3D G3DSA:3.30.160.20 152 223 8.1E-28 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 SUPERFAMILY SSF69065 6 158 2.62E-51 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 30.386 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 VCLMA_RS11400 c2458f9684157ed51c6093390d9c8b77 225 SMART SM00535 20 148 1.2E-58 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 SUPERFAMILY SSF158791 20 126 4.45E-6 T 22-04-2016 VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 SUPERFAMILY SSF161093 275 446 1.03E-47 T 22-04-2016 VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 Pfam PF00571 CBS domain 198 248 0.0026 T 22-04-2016 IPR000644 CBS domain VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 SUPERFAMILY SSF54631 133 270 2.44E-19 T 22-04-2016 VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 Gene3D G3DSA:3.10.580.10 130 258 3.7E-11 T 22-04-2016 VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 PANTHER PTHR11911:SF84 103 415 2.6E-109 T 22-04-2016 VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 PANTHER PTHR11911 103 415 2.6E-109 T 22-04-2016 VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 SMART SM00116 204 251 7.4E-4 T 22-04-2016 IPR000644 CBS domain VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 Pfam PF01769 Divalent cation transporter 318 439 1.4E-24 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 TIGRFAM TIGR00400 mgtE: magnesium transporter 39 446 5.4E-70 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VCLMA_RS07695 9efd83345c687a0d8cf6190e7a132794 450 Gene3D G3DSA:1.10.357.20 274 446 5.6E-58 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 SMART SM00448 1030 1143 4.1E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 Gene3D G3DSA:1.10.287.130 780 849 8.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 Pfam PF12860 PAS fold 634 748 2.5E-44 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 SUPERFAMILY SSF47384 773 854 8.44E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1005 9.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 SMART SM00387 897 1007 1.4E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 SUPERFAMILY SSF55785 626 741 2.72E-9 T 22-04-2016 IPR000014 PAS domain VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PANTHER PTHR24423 626 760 5.5E-258 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PANTHER PTHR24423 786 1146 5.5E-258 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PANTHER PTHR24423 179 198 5.5E-258 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PANTHER PTHR24423 9 60 5.5E-258 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PANTHER PTHR24423:SF439 626 760 5.5E-258 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PANTHER PTHR24423:SF439 786 1146 5.5E-258 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PANTHER PTHR24423:SF439 179 198 5.5E-258 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PANTHER PTHR24423:SF439 9 60 5.5E-258 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 SUPERFAMILY SSF52172 1029 1146 3.84E-17 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 Gene3D G3DSA:3.30.565.10 854 1009 1.7E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 962 8.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 991 1004 8.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 934 948 8.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 PRINTS PR00344 Bacterial sensor protein C-terminal signature 967 985 8.2E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 Gene3D G3DSA:3.30.450.20 626 741 2.7E-14 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 3.3E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 Pfam PF00072 Response regulator receiver domain 1032 1143 4.0E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 Gene3D G3DSA:3.40.50.2300 1028 1146 2.6E-15 T 22-04-2016 VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 SUPERFAMILY SSF55874 842 1004 1.7E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS01450 f695884f887f94f3d17c5a74d9802549 1147 SMART SM00388 788 853 1.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS05910 3100d2d9065184b77cb1fec135a3c049 100 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 74 5.2E-9 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS05910 3100d2d9065184b77cb1fec135a3c049 100 SUPERFAMILY SSF54292 8 82 2.36E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS05910 3100d2d9065184b77cb1fec135a3c049 100 Gene3D G3DSA:3.10.20.30 11 82 3.0E-18 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS05910 3100d2d9065184b77cb1fec135a3c049 100 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 PANTHER PTHR13789 1 402 1.2E-203 T 22-04-2016 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 Gene3D G3DSA:3.50.50.60 14 194 1.4E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 Gene3D G3DSA:3.50.50.60 280 364 1.4E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 16 397 3.3E-121 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 SUPERFAMILY SSF51905 15 189 4.96E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 SUPERFAMILY SSF51905 279 392 4.96E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 Pfam PF01494 FAD binding domain 15 352 1.6E-23 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 16 398 4.7E-160 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 PANTHER PTHR13789:SF214 1 402 1.2E-203 T 22-04-2016 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 16 38 2.3E-10 T 22-04-2016 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 307 2.3E-10 T 22-04-2016 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 323 2.3E-10 T 22-04-2016 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 168 183 2.3E-10 T 22-04-2016 VCLMA_RS11470 c9b521b31927aa961da25e61b05e184a 402 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 306 319 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 SUPERFAMILY SSF52540 6 203 1.78E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 TIGRFAM TIGR00235 udk: uridine kinase 3 210 5.1E-88 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 197 1.0E-39 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 Gene3D G3DSA:3.40.50.300 3 203 1.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 PRINTS PR00988 Uridine kinase signature 7 24 4.3E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 PRINTS PR00988 Uridine kinase signature 41 52 4.3E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 PRINTS PR00988 Uridine kinase signature 155 166 4.3E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 PRINTS PR00988 Uridine kinase signature 85 100 4.3E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 PRINTS PR00988 Uridine kinase signature 141 151 4.3E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 PRINTS PR00988 Uridine kinase signature 177 190 4.3E-37 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 Hamap MF_00551 Uridine kinase [udk]. 4 211 38.205 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 VCLMA_RS04870 2497918ff0da8762380c3009d08e5deb 212 PANTHER PTHR10285 1 210 4.2E-92 T 22-04-2016 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.031 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.459 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 SUPERFAMILY SSF81901 39 273 1.8E-20 T 22-04-2016 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 141 174 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 249 282 220.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 214 247 0.25 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 180 213 0.43 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 SMART SM00028 69 102 81.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 Gene3D G3DSA:1.25.40.10 42 233 1.8E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 Gene3D G3DSA:1.25.40.10 234 336 9.9E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS08780 f25189b384560aba6ba7f04fbbcbd812 389 PANTHER PTHR23083 8 322 2.1E-38 T 22-04-2016 VCLMA_RS12595 a35cdb6d0273dfba0474aac8a1c5f148 88 Pfam PF13937 Domain of unknown function (DUF4212) 9 85 1.2E-34 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted VCLMA_RS12595 a35cdb6d0273dfba0474aac8a1c5f148 88 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 1.9E-35 T 22-04-2016 IPR019886 Sodium symporter small subunit, predicted VCLMA_RS02500 7cc1b9c90d39bc0786a65cfba84b8999 147 Pfam PF09424 Yqey-like protein 5 146 2.5E-57 T 22-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial VCLMA_RS02500 7cc1b9c90d39bc0786a65cfba84b8999 147 Gene3D G3DSA:1.10.1510.10 1 90 1.7E-33 T 22-04-2016 VCLMA_RS02500 7cc1b9c90d39bc0786a65cfba84b8999 147 Gene3D G3DSA:1.10.10.410 91 147 4.5E-24 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VCLMA_RS02500 7cc1b9c90d39bc0786a65cfba84b8999 147 PANTHER PTHR28055 1 147 4.2E-52 T 22-04-2016 VCLMA_RS02500 7cc1b9c90d39bc0786a65cfba84b8999 147 SUPERFAMILY SSF89095 1 146 5.75E-44 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 VCLMA_RS02500 7cc1b9c90d39bc0786a65cfba84b8999 147 PANTHER PTHR28055:SF1 1 147 4.2E-52 T 22-04-2016 VCLMA_RS01020 e6a731d7d0597d5b4d13acdab598cdb7 325 PANTHER PTHR30606 12 316 5.2E-186 T 22-04-2016 VCLMA_RS01020 e6a731d7d0597d5b4d13acdab598cdb7 325 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 14 316 2.3E-116 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VCLMA_RS01020 e6a731d7d0597d5b4d13acdab598cdb7 325 PANTHER PTHR30606:SF4 12 316 5.2E-186 T 22-04-2016 VCLMA_RS01020 e6a731d7d0597d5b4d13acdab598cdb7 325 PIRSF PIRSF026649 13 316 1.6E-85 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VCLMA_RS01020 e6a731d7d0597d5b4d13acdab598cdb7 325 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 50.682 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 VCLMA_RS01020 e6a731d7d0597d5b4d13acdab598cdb7 325 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 15 308 5.1E-76 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 60 109 6.0E-24 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 SUPERFAMILY SSF141734 13 123 1.12E-46 T 22-04-2016 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 122 205 9.9E-33 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 PANTHER PTHR21256 13 210 9.2E-119 T 22-04-2016 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 12 210 38.328 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 119 205 20.021 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 37 109 7.5E-33 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 209 2.7E-19 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 SUPERFAMILY SSF101386 122 210 7.85E-26 T 22-04-2016 VCLMA_RS05360 023d33c8f7803b5b5e3d0142d7c94c2e 210 PANTHER PTHR21256:SF16 13 210 9.2E-119 T 22-04-2016 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 PANTHER PTHR32089:SF64 46 418 1.1E-127 T 22-04-2016 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 214 416 2.8E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 68 88 1.3E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 283 312 1.3E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 254 281 1.3E-20 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 SMART SM00283 156 417 9.3E-69 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 Pfam PF00672 HAMP domain 70 138 1.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 SUPERFAMILY SSF58104 109 418 9.81E-75 T 22-04-2016 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 SMART SM00304 89 141 0.0026 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 PANTHER PTHR32089 46 418 1.1E-127 T 22-04-2016 VCLMA_RS11295 29a81a01d0c2981dca4da993903b89ca 418 Gene3D G3DSA:1.10.287.950 173 386 1.6E-58 T 22-04-2016 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 PRINTS PR00094 Adenylate kinase signature 173 187 7.4E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 PRINTS PR00094 Adenylate kinase signature 4 17 7.4E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 PRINTS PR00094 Adenylate kinase signature 81 97 7.4E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 PRINTS PR00094 Adenylate kinase signature 156 171 7.4E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 PRINTS PR00094 Adenylate kinase signature 32 46 7.4E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.211 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.7E-75 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.8E-14 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 PANTHER PTHR23359 1 213 5.3E-113 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 Pfam PF00406 Adenylate kinase 5 185 6.8E-60 T 22-04-2016 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 SUPERFAMILY SSF52540 1 213 4.78E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04610 774fdda8b037a18739c573ee752a245b 214 Gene3D G3DSA:3.40.50.300 1 212 1.4E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05840 9f2f9086590c0306ebdc0769f83f3124 341 Pfam PF02277 Phosphoribosyltransferase 2 339 2.1E-126 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VCLMA_RS05840 9f2f9086590c0306ebdc0769f83f3124 341 Gene3D G3DSA:1.10.1610.10 2 66 1.5E-28 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VCLMA_RS05840 9f2f9086590c0306ebdc0769f83f3124 341 PANTHER PTHR21712 2 341 1.7E-124 T 22-04-2016 VCLMA_RS05840 9f2f9086590c0306ebdc0769f83f3124 341 PANTHER PTHR21712:SF4 2 341 1.7E-124 T 22-04-2016 VCLMA_RS05840 9f2f9086590c0306ebdc0769f83f3124 341 SUPERFAMILY SSF52733 2 340 1.16E-112 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VCLMA_RS05840 9f2f9086590c0306ebdc0769f83f3124 341 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 341 37.058 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VCLMA_RS05840 9f2f9086590c0306ebdc0769f83f3124 341 Gene3D G3DSA:3.40.50.10210 67 322 7.3E-106 T 22-04-2016 VCLMA_RS05840 9f2f9086590c0306ebdc0769f83f3124 341 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 339 1.4E-136 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 VCLMA_RS03090 63851d7bfeb3e2b93d8f50ec9992bfb1 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-37 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 VCLMA_RS03090 63851d7bfeb3e2b93d8f50ec9992bfb1 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 6.6E-21 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VCLMA_RS03090 63851d7bfeb3e2b93d8f50ec9992bfb1 98 SMART SM01103 3 86 3.0E-40 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VCLMA_RS03090 63851d7bfeb3e2b93d8f50ec9992bfb1 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 1.0E-44 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VCLMA_RS03090 63851d7bfeb3e2b93d8f50ec9992bfb1 98 Gene3D G3DSA:3.30.110.60 1 96 3.7E-32 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VCLMA_RS03090 63851d7bfeb3e2b93d8f50ec9992bfb1 98 PANTHER PTHR31846 1 98 5.0E-41 T 22-04-2016 VCLMA_RS03090 63851d7bfeb3e2b93d8f50ec9992bfb1 98 SUPERFAMILY SSF75471 1 94 3.4E-30 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.1E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 PANTHER PTHR30419 1 292 3.4E-140 T 22-04-2016 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 Gene3D G3DSA:3.40.190.10 175 261 6.1E-23 T 22-04-2016 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 Pfam PF03466 LysR substrate binding domain 87 290 2.2E-42 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 PANTHER PTHR30419:SF8 1 292 3.4E-140 T 22-04-2016 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 SUPERFAMILY SSF46785 1 86 1.49E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 SUPERFAMILY SSF53850 89 290 1.63E-35 T 22-04-2016 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 Gene3D G3DSA:3.40.190.10 89 174 7.9E-12 T 22-04-2016 VCLMA_RS09695 9f4da3301caa467b549805c9c9ee5c45 292 Gene3D G3DSA:1.10.10.10 1 86 1.8E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 Gene3D G3DSA:3.50.50.60 264 346 3.1E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 Gene3D G3DSA:3.50.50.60 5 183 3.1E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 6.5E-20 T 22-04-2016 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 6.5E-20 T 22-04-2016 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 6.5E-20 T 22-04-2016 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 6.5E-20 T 22-04-2016 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 PANTHER PTHR13789:SF233 5 380 6.4E-243 T 22-04-2016 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 PANTHER PTHR13789 5 380 6.4E-243 T 22-04-2016 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 Pfam PF01494 FAD binding domain 6 309 6.9E-25 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 380 8.6E-112 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 SUPERFAMILY SSF51905 5 178 3.17E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS04500 95e5670352c384aebc3479a62857a44d 401 SUPERFAMILY SSF51905 263 374 3.17E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS00345 182d4e41c43042c02208ed5b29c3021f 370 SUPERFAMILY SSF102114 37 333 1.1E-52 T 22-04-2016 VCLMA_RS00345 182d4e41c43042c02208ed5b29c3021f 370 Gene3D G3DSA:3.20.20.70 37 359 2.9E-46 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS00345 182d4e41c43042c02208ed5b29c3021f 370 SMART SM00876 256 359 1.6E-33 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS00345 182d4e41c43042c02208ed5b29c3021f 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 358 2.6E-24 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS00345 182d4e41c43042c02208ed5b29c3021f 370 PANTHER PTHR22976:SF17 3 365 2.4E-220 T 22-04-2016 VCLMA_RS00345 182d4e41c43042c02208ed5b29c3021f 370 Pfam PF04055 Radical SAM superfamily 81 221 3.3E-10 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS00345 182d4e41c43042c02208ed5b29c3021f 370 PANTHER PTHR22976 3 365 2.4E-220 T 22-04-2016 VCLMA_RS00345 182d4e41c43042c02208ed5b29c3021f 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 2.2E-172 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 VCLMA_RS02140 6d1e918aac04c21aff7d3f98203263e5 140 PIRSF PIRSF018193 8 140 2.3E-61 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B VCLMA_RS02140 6d1e918aac04c21aff7d3f98203263e5 140 Gene3D G3DSA:3.30.70.970 9 127 5.0E-51 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain VCLMA_RS02140 6d1e918aac04c21aff7d3f98203263e5 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 30.398 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B VCLMA_RS02140 6d1e918aac04c21aff7d3f98203263e5 140 Pfam PF06877 Regulator of ribonuclease activity B 19 120 9.2E-34 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain VCLMA_RS02140 6d1e918aac04c21aff7d3f98203263e5 140 SUPERFAMILY SSF89946 7 126 4.71E-40 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain VCLMA_RS05300 4b0fb69a1369617efd5873ed2503a275 205 PANTHER PTHR38100 2 205 1.0E-99 T 22-04-2016 VCLMA_RS05300 4b0fb69a1369617efd5873ed2503a275 205 SUPERFAMILY SSF101322 2 204 2.88E-79 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VCLMA_RS05300 4b0fb69a1369617efd5873ed2503a275 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 7.9E-76 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VCLMA_RS05300 4b0fb69a1369617efd5873ed2503a275 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 8.0E-107 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VCLMA_RS05300 4b0fb69a1369617efd5873ed2503a275 205 PANTHER PTHR38100:SF1 2 205 1.0E-99 T 22-04-2016 VCLMA_RS05300 4b0fb69a1369617efd5873ed2503a275 205 Gene3D G3DSA:1.10.3890.10 3 205 4.0E-87 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VCLMA_RS05300 4b0fb69a1369617efd5873ed2503a275 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.461 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 VCLMA_RS04405 bcd0c59fb478e7bc49d3aa694719feb5 321 PIRSF PIRSF005963 2 320 5.7E-130 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VCLMA_RS04405 bcd0c59fb478e7bc49d3aa694719feb5 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 26 73 1.8E-8 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VCLMA_RS04405 bcd0c59fb478e7bc49d3aa694719feb5 321 Pfam PF04055 Radical SAM superfamily 91 252 2.1E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS04405 bcd0c59fb478e7bc49d3aa694719feb5 321 PANTHER PTHR10949 4 321 4.6E-180 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VCLMA_RS04405 bcd0c59fb478e7bc49d3aa694719feb5 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 1.1E-149 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VCLMA_RS04405 bcd0c59fb478e7bc49d3aa694719feb5 321 SUPERFAMILY SSF102114 52 316 5.62E-69 T 22-04-2016 VCLMA_RS04405 bcd0c59fb478e7bc49d3aa694719feb5 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 155.467 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VCLMA_RS04405 bcd0c59fb478e7bc49d3aa694719feb5 321 Gene3D G3DSA:3.20.20.70 53 312 8.8E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS04405 bcd0c59fb478e7bc49d3aa694719feb5 321 SMART SM00729 84 293 1.0E-18 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 SMART SM00864 13 205 4.1E-111 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 385 38.086 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 PANTHER PTHR30314 1 396 6.2E-208 T 22-04-2016 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 3.3E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 6.4E-136 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 SMART SM00865 207 325 8.0E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 SUPERFAMILY SSF55307 204 320 8.93E-43 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 PANTHER PTHR30314:SF3 1 396 6.2E-208 T 22-04-2016 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 Gene3D G3DSA:3.40.50.1440 14 214 6.1E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 Gene3D G3DSA:3.30.1330.20 215 322 3.1E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 Pfam PF12327 FtsZ family, C-terminal domain 222 316 4.4E-36 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 SUPERFAMILY SSF52490 13 208 6.8E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.7E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.7E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.7E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VCLMA_RS11100 9b8a39b37c060c88062993c46b42c633 398 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.7E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 SMART SM00260 613 753 2.0E-23 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Gene3D G3DSA:1.20.120.160 2 134 2.1E-30 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 SUPERFAMILY SSF50341 620 752 2.62E-27 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Pfam PF01584 CheW-like domain 626 755 5.5E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 SUPERFAMILY SSF47384 366 434 1.06E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 PANTHER PTHR22617 1 144 7.8E-277 T 22-04-2016 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 PANTHER PTHR22617 192 756 7.8E-277 T 22-04-2016 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 619 1.2E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 SUPERFAMILY SSF47226 2 119 1.62E-24 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 SUPERFAMILY SSF55874 435 619 2.88E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Gene3D G3DSA:1.10.287.560 366 434 1.1E-13 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Gene3D G3DSA:2.30.30.40 709 751 1.2E-15 T 22-04-2016 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Gene3D G3DSA:2.30.30.40 621 642 1.2E-15 T 22-04-2016 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 SMART SM00387 478 621 4.8E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 366 432 2.6E-14 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 PANTHER PTHR22617:SF6 1 144 7.8E-277 T 22-04-2016 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 PANTHER PTHR22617:SF6 192 756 7.8E-277 T 22-04-2016 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Pfam PF01627 Hpt domain 2 94 3.8E-12 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Gene3D G3DSA:2.40.50.180 651 708 2.3E-11 T 22-04-2016 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 605 618 3.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 581 599 3.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 3.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 575 3.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 SMART SM01231 365 433 1.6E-13 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 Gene3D G3DSA:3.30.565.10 435 619 2.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS06590 84cd552ab89f9197fba34f20eb127440 757 SMART SM00073 1 95 4.0E-13 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS02115 6ad1fc3908f392ce949c01b9b4db441d 487 SUPERFAMILY SSF50249 39 128 1.44E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS02115 6ad1fc3908f392ce949c01b9b4db441d 487 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 3.1E-169 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VCLMA_RS02115 6ad1fc3908f392ce949c01b9b4db441d 487 Pfam PF00575 S1 RNA binding domain 38 109 5.5E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS02115 6ad1fc3908f392ce949c01b9b4db441d 487 PANTHER PTHR30001 1 487 4.0E-219 T 22-04-2016 VCLMA_RS02115 6ad1fc3908f392ce949c01b9b4db441d 487 Gene3D G3DSA:2.40.50.140 30 128 3.3E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS02115 6ad1fc3908f392ce949c01b9b4db441d 487 SMART SM00316 37 122 5.6E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS02115 6ad1fc3908f392ce949c01b9b4db441d 487 Pfam PF10150 Ribonuclease E/G family 124 391 6.3E-100 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 498 1.3E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 PANTHER PTHR30009:SF4 265 523 5.1E-254 T 22-04-2016 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 PANTHER PTHR30009:SF4 4 249 5.1E-254 T 22-04-2016 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 PANTHER PTHR30009 265 523 5.1E-254 T 22-04-2016 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 PANTHER PTHR30009 4 249 5.1E-254 T 22-04-2016 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 509 1.0E-216 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 SUPERFAMILY SSF55604 438 511 4.32E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 Gene3D G3DSA:3.30.1360.60 437 512 7.2E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 Pfam PF00367 phosphotransferase system, EIIB 440 473 3.1E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 451 468 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VCLMA_RS04650 fcd3dd0dff934d675c3ac2f956396af8 523 Pfam PF02378 Phosphotransferase system, EIIC 11 353 7.7E-62 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VCLMA_RS10805 23ca72990f2ddbe4e15010c0e9775825 483 Gene3D G3DSA:3.30.1490.20 283 356 9.9E-11 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS10805 23ca72990f2ddbe4e15010c0e9775825 483 PANTHER PTHR11609:SF4 154 481 1.1E-149 T 22-04-2016 VCLMA_RS10805 23ca72990f2ddbe4e15010c0e9775825 483 PANTHER PTHR11609 154 481 1.1E-149 T 22-04-2016 VCLMA_RS10805 23ca72990f2ddbe4e15010c0e9775825 483 Gene3D G3DSA:3.30.470.20 276 282 8.0E-6 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS10805 23ca72990f2ddbe4e15010c0e9775825 483 Gene3D G3DSA:3.30.470.20 357 454 8.0E-6 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS10805 23ca72990f2ddbe4e15010c0e9775825 483 SUPERFAMILY SSF56059 268 476 7.26E-40 T 22-04-2016 VCLMA_RS10805 23ca72990f2ddbe4e15010c0e9775825 483 Pfam PF08443 RimK-like ATP-grasp domain 277 455 4.2E-12 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type VCLMA_RS10805 23ca72990f2ddbe4e15010c0e9775825 483 Gene3D G3DSA:3.40.50.20 208 275 7.1E-9 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS10805 23ca72990f2ddbe4e15010c0e9775825 483 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 27 167 4.6E-42 T 22-04-2016 IPR025839 RimK-like ATPgrasp N-terminal domain VCLMA_RS07120 94dfb94425afc7e25c568b25884db059 166 SUPERFAMILY SSF54001 37 159 7.85E-41 T 22-04-2016 VCLMA_RS07120 94dfb94425afc7e25c568b25884db059 166 PANTHER PTHR21666 24 166 1.5E-38 T 22-04-2016 VCLMA_RS07120 94dfb94425afc7e25c568b25884db059 166 Gene3D G3DSA:3.90.1720.10 46 158 7.1E-41 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS07120 94dfb94425afc7e25c568b25884db059 166 Pfam PF00877 NlpC/P60 family 53 157 2.2E-30 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 PRINTS PR00207 Flagellin signature 76 95 6.42E-25 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 PRINTS PR00207 Flagellin signature 37 54 6.42E-25 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 PRINTS PR00207 Flagellin signature 111 134 6.42E-25 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 SUPERFAMILY SSF64518 1 377 9.42E-93 T 22-04-2016 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 Pfam PF07196 Flagellin hook IN motif 201 245 3.2E-10 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 PANTHER PTHR30244 2 378 7.2E-169 T 22-04-2016 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-24 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.2E-40 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 Gene3D G3DSA:1.20.1330.10 279 332 2.8E-58 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 Gene3D G3DSA:1.20.1330.10 55 171 2.8E-58 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS09890 442b570493db4e2575d2a55fb3652b2d 378 PANTHER PTHR30244:SF1 2 378 7.2E-169 T 22-04-2016 VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 PANTHER PTHR10996 1 369 6.4E-244 T 22-04-2016 VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 PANTHER PTHR10996:SF18 1 369 6.4E-244 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 Gene3D G3DSA:3.40.50.720 8 119 2.2E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 3.0E-38 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 Gene3D G3DSA:3.40.50.720 120 297 2.7E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 SUPERFAMILY SSF52283 7 136 3.59E-49 T 22-04-2016 VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 4.0E-54 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 SUPERFAMILY SSF51735 108 295 4.21E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 SUPERFAMILY SSF55021 335 408 3.28E-18 T 22-04-2016 VCLMA_RS11495 14976e48dbcff7fb0b6875df6c29f649 409 Gene3D G3DSA:3.30.70.260 324 408 6.8E-30 T 22-04-2016 VCLMA_RS04525 2ca8dde79ba0c23b7902b81dfa04e056 322 PANTHER PTHR10314:SF110 3 314 1.5E-159 T 22-04-2016 VCLMA_RS04525 2ca8dde79ba0c23b7902b81dfa04e056 322 PANTHER PTHR10314 3 314 1.5E-159 T 22-04-2016 VCLMA_RS04525 2ca8dde79ba0c23b7902b81dfa04e056 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.5E-142 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VCLMA_RS04525 2ca8dde79ba0c23b7902b81dfa04e056 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VCLMA_RS04525 2ca8dde79ba0c23b7902b81dfa04e056 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 4.0E-135 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 VCLMA_RS04525 2ca8dde79ba0c23b7902b81dfa04e056 322 Gene3D G3DSA:3.40.50.1100 36 132 1.1E-37 T 22-04-2016 VCLMA_RS04525 2ca8dde79ba0c23b7902b81dfa04e056 322 Gene3D G3DSA:3.40.50.1100 133 312 3.8E-74 T 22-04-2016 VCLMA_RS04525 2ca8dde79ba0c23b7902b81dfa04e056 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 1.2E-66 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS04525 2ca8dde79ba0c23b7902b81dfa04e056 322 SUPERFAMILY SSF53686 4 309 9.43E-96 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS00040 cd15a1091acfc6e5cccb088c0b8fe9f5 245 SMART SM00382 26 216 2.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS00040 cd15a1091acfc6e5cccb088c0b8fe9f5 245 PANTHER PTHR24220 3 242 1.3E-131 T 22-04-2016 VCLMA_RS00040 cd15a1091acfc6e5cccb088c0b8fe9f5 245 Pfam PF00005 ABC transporter 17 168 9.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS00040 cd15a1091acfc6e5cccb088c0b8fe9f5 245 SUPERFAMILY SSF52540 1 238 2.32E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00040 cd15a1091acfc6e5cccb088c0b8fe9f5 245 PIRSF PIRSF039085 1 244 4.0E-106 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VCLMA_RS00040 cd15a1091acfc6e5cccb088c0b8fe9f5 245 PANTHER PTHR24220:SF327 3 242 1.3E-131 T 22-04-2016 VCLMA_RS00040 cd15a1091acfc6e5cccb088c0b8fe9f5 245 Gene3D G3DSA:3.40.50.300 1 240 2.3E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00040 cd15a1091acfc6e5cccb088c0b8fe9f5 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS10660 5001b2cf2e028af0b0e14cf8a0a31c80 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 1.9E-214 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VCLMA_RS10660 5001b2cf2e028af0b0e14cf8a0a31c80 446 PANTHER PTHR37839:SF1 1 446 4.8E-229 T 22-04-2016 VCLMA_RS10660 5001b2cf2e028af0b0e14cf8a0a31c80 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 2.6E-114 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VCLMA_RS10660 5001b2cf2e028af0b0e14cf8a0a31c80 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.425 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VCLMA_RS10660 5001b2cf2e028af0b0e14cf8a0a31c80 446 Pfam PF11973 NQRA C-terminal domain 261 310 4.8E-21 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VCLMA_RS10660 5001b2cf2e028af0b0e14cf8a0a31c80 446 PANTHER PTHR37839 1 446 4.8E-229 T 22-04-2016 VCLMA_RS02550 e533c3b1e4190e4c8af0e22da4cfaf79 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 2.6E-69 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS02550 e533c3b1e4190e4c8af0e22da4cfaf79 158 SUPERFAMILY SSF69765 1 157 3.14E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS02550 e533c3b1e4190e4c8af0e22da4cfaf79 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS02550 e533c3b1e4190e4c8af0e22da4cfaf79 158 Gene3D G3DSA:3.30.1330.50 1 157 1.2E-72 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS02550 e533c3b1e4190e4c8af0e22da4cfaf79 158 Pfam PF02542 YgbB family 2 155 2.4E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS02550 e533c3b1e4190e4c8af0e22da4cfaf79 158 PANTHER PTHR32125 1 155 7.2E-60 T 22-04-2016 VCLMA_RS02550 e533c3b1e4190e4c8af0e22da4cfaf79 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.916 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS02860 fa8f3a2c115e3cd32562dcb18d3913e3 222 SMART SM00947 30 192 7.5E-67 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VCLMA_RS02860 fa8f3a2c115e3cd32562dcb18d3913e3 222 Gene3D G3DSA:3.40.1050.10 1 213 2.3E-79 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VCLMA_RS02860 fa8f3a2c115e3cd32562dcb18d3913e3 222 Pfam PF00484 Carbonic anhydrase 38 188 2.1E-50 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VCLMA_RS02860 fa8f3a2c115e3cd32562dcb18d3913e3 222 PANTHER PTHR11002 1 207 6.0E-134 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VCLMA_RS02860 fa8f3a2c115e3cd32562dcb18d3913e3 222 SUPERFAMILY SSF53056 2 214 3.4E-75 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VCLMA_RS02860 fa8f3a2c115e3cd32562dcb18d3913e3 222 PANTHER PTHR11002:SF11 1 207 6.0E-134 T 22-04-2016 VCLMA_RS02860 fa8f3a2c115e3cd32562dcb18d3913e3 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VCLMA_RS02860 fa8f3a2c115e3cd32562dcb18d3913e3 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VCLMA_RS00045 8cbbbbf4a9db6a310f044040c7a3a96e 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 2.5E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VCLMA_RS00045 8cbbbbf4a9db6a310f044040c7a3a96e 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 218 2.6E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS00045 8cbbbbf4a9db6a310f044040c7a3a96e 223 Gene3D G3DSA:1.10.3720.10 14 219 5.1E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS00045 8cbbbbf4a9db6a310f044040c7a3a96e 223 PANTHER PTHR30614:SF16 1 223 5.0E-147 T 22-04-2016 VCLMA_RS00045 8cbbbbf4a9db6a310f044040c7a3a96e 223 SUPERFAMILY SSF161098 13 206 2.75E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS00045 8cbbbbf4a9db6a310f044040c7a3a96e 223 PANTHER PTHR30614 1 223 5.0E-147 T 22-04-2016 VCLMA_RS06745 75525b63a5adcf79249730d204123e5f 310 Pfam PF01171 PP-loop family 43 203 7.4E-15 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VCLMA_RS06745 75525b63a5adcf79249730d204123e5f 310 SUPERFAMILY SSF52402 29 255 3.46E-56 T 22-04-2016 VCLMA_RS06745 75525b63a5adcf79249730d204123e5f 310 PANTHER PTHR11807 1 266 4.9E-121 T 22-04-2016 VCLMA_RS06745 75525b63a5adcf79249730d204123e5f 310 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 3 270 57.883 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VCLMA_RS06745 75525b63a5adcf79249730d204123e5f 310 PANTHER PTHR11807:SF16 1 266 4.9E-121 T 22-04-2016 VCLMA_RS06745 75525b63a5adcf79249730d204123e5f 310 PIRSF PIRSF004976 2 271 5.7E-75 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 VCLMA_RS06745 75525b63a5adcf79249730d204123e5f 310 Gene3D G3DSA:3.40.50.620 26 208 5.2E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS07335 17030dc21353b1aeeaba5b878dc2bca5 838 PANTHER PTHR38344 1 838 0.0 T 22-04-2016 VCLMA_RS07335 17030dc21353b1aeeaba5b878dc2bca5 838 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 22 807 3.0E-250 T 22-04-2016 IPR018752 Uncharacterised protein family UPF0753 VCLMA_RS07335 17030dc21353b1aeeaba5b878dc2bca5 838 Hamap MF_01871 UPF0753 protein . 17 822 23.319 T 22-04-2016 IPR018752 Uncharacterised protein family UPF0753 VCLMA_RS07335 17030dc21353b1aeeaba5b878dc2bca5 838 PANTHER PTHR38344:SF1 1 838 0.0 T 22-04-2016 VCLMA_RS02950 11fbff735a296dea687934b999955897 409 PANTHER PTHR11730:SF6 2 76 1.7E-146 T 22-04-2016 VCLMA_RS02950 11fbff735a296dea687934b999955897 409 PANTHER PTHR11730:SF6 95 404 1.7E-146 T 22-04-2016 VCLMA_RS02950 11fbff735a296dea687934b999955897 409 ProSitePatterns PS01219 Ammonium transporters signature. 163 188 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VCLMA_RS02950 11fbff735a296dea687934b999955897 409 PANTHER PTHR11730 2 76 1.7E-146 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VCLMA_RS02950 11fbff735a296dea687934b999955897 409 PANTHER PTHR11730 95 404 1.7E-146 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 VCLMA_RS02950 11fbff735a296dea687934b999955897 409 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 12 405 5.6E-205 T 22-04-2016 IPR019879 Ammonium transporter, marine subtype VCLMA_RS02950 11fbff735a296dea687934b999955897 409 SUPERFAMILY SSF111352 12 383 2.88E-105 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VCLMA_RS02950 11fbff735a296dea687934b999955897 409 Gene3D G3DSA:1.10.3430.10 27 398 1.3E-108 T 22-04-2016 IPR029020 Ammonium/urea transporter VCLMA_RS02950 11fbff735a296dea687934b999955897 409 Pfam PF00909 Ammonium Transporter Family 18 402 9.2E-101 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VCLMA_RS11855 c508d4d9c8239d36c34e43e8d5c1e475 571 Gene3D G3DSA:2.40.160.50 288 568 6.6E-18 T 22-04-2016 VCLMA_RS11855 c508d4d9c8239d36c34e43e8d5c1e475 571 Pfam PF01103 Surface antigen 275 568 5.4E-29 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VCLMA_RS11855 c508d4d9c8239d36c34e43e8d5c1e475 571 PANTHER PTHR12815:SF12 1 571 4.8E-251 T 22-04-2016 VCLMA_RS11855 c508d4d9c8239d36c34e43e8d5c1e475 571 PANTHER PTHR12815 1 571 4.8E-251 T 22-04-2016 VCLMA_RS00255 14e16a2919bf1b4f647728f1f2a50d73 161 Gene3D G3DSA:3.40.50.7700 1 158 2.3E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VCLMA_RS00255 14e16a2919bf1b4f647728f1f2a50d73 161 SMART SM01001 1 152 4.0E-103 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VCLMA_RS00255 14e16a2919bf1b4f647728f1f2a50d73 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 4.0E-68 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VCLMA_RS00255 14e16a2919bf1b4f647728f1f2a50d73 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.431 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VCLMA_RS00255 14e16a2919bf1b4f647728f1f2a50d73 161 PIRSF PIRSF001338 1 161 2.8E-68 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 VCLMA_RS00255 14e16a2919bf1b4f647728f1f2a50d73 161 SUPERFAMILY SSF52255 2 159 1.29E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VCLMA_RS00255 14e16a2919bf1b4f647728f1f2a50d73 161 Pfam PF00731 AIR carboxylase 3 150 1.6E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 VCLMA_RS00255 14e16a2919bf1b4f647728f1f2a50d73 161 PANTHER PTHR23046 3 161 2.7E-85 T 22-04-2016 VCLMA_RS00255 14e16a2919bf1b4f647728f1f2a50d73 161 PANTHER PTHR23046:SF2 3 161 2.7E-85 T 22-04-2016 VCLMA_RS05145 a18b6b4ef15350d23470504a3d39771d 330 PANTHER PTHR24220 10 329 8.5E-199 T 22-04-2016 VCLMA_RS05145 a18b6b4ef15350d23470504a3d39771d 330 Pfam PF00005 ABC transporter 38 189 1.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS05145 a18b6b4ef15350d23470504a3d39771d 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 1.0E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS05145 a18b6b4ef15350d23470504a3d39771d 330 PANTHER PTHR24220:SF544 10 329 8.5E-199 T 22-04-2016 VCLMA_RS05145 a18b6b4ef15350d23470504a3d39771d 330 Gene3D G3DSA:3.40.50.300 8 263 1.5E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05145 a18b6b4ef15350d23470504a3d39771d 330 SMART SM00382 46 239 1.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS05145 a18b6b4ef15350d23470504a3d39771d 330 SUPERFAMILY SSF52540 9 261 2.42E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05145 a18b6b4ef15350d23470504a3d39771d 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS05145 a18b6b4ef15350d23470504a3d39771d 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 1.9E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS00490 b8dd62dba87a6f92d3cb9a692cb5f544 179 PANTHER PTHR38683 3 179 3.5E-70 T 22-04-2016 VCLMA_RS00490 b8dd62dba87a6f92d3cb9a692cb5f544 179 Pfam PF04345 Chorismate lyase 11 179 8.3E-80 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VCLMA_RS00490 b8dd62dba87a6f92d3cb9a692cb5f544 179 SUPERFAMILY SSF64288 8 174 2.28E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VCLMA_RS00490 b8dd62dba87a6f92d3cb9a692cb5f544 179 Gene3D G3DSA:3.40.1410.10 11 174 6.5E-49 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VCLMA_RS00490 b8dd62dba87a6f92d3cb9a692cb5f544 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.609 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 PANTHER PTHR22807:SF38 1 367 1.8E-245 T 22-04-2016 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 Gene3D G3DSA:3.40.50.150 100 308 2.7E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.7E-29 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 2.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 2.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 2.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 2.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 2.2E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 473 63.362 T 22-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 SUPERFAMILY SSF53335 6 308 8.44E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 Pfam PF01189 16S rRNA methyltransferase RsmB/F 115 306 2.9E-49 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 3.8E-100 T 22-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 468 1.1E-10 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06965 a915b057f4a9cce5f8e9f6812563b38c 473 PANTHER PTHR22807 1 367 1.8E-245 T 22-04-2016 VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 Pfam PF00082 Subtilase family 169 395 5.2E-39 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 SUPERFAMILY SSF52743 145 401 4.97E-85 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 457 521 2.3E-10 T 22-04-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 SUPERFAMILY SSF54897 50 130 9.64E-13 T 22-04-2016 IPR009020 Proteinase inhibitor, propeptide VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 PANTHER PTHR10795 46 390 4.8E-198 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 PANTHER PTHR10795 1 25 4.8E-198 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 174 185 - T 22-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 Gene3D G3DSA:3.40.50.200 119 402 1.2E-92 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 PRINTS PR00723 Subtilisin serine protease family (S8) signature 358 374 2.3E-20 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 PRINTS PR00723 Subtilisin serine protease family (S8) signature 169 188 2.3E-20 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 PRINTS PR00723 Subtilisin serine protease family (S8) signature 207 220 2.3E-20 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 PANTHER PTHR10795:SF310 46 390 4.8E-198 T 22-04-2016 VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 PANTHER PTHR10795:SF310 1 25 4.8E-198 T 22-04-2016 VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 Pfam PF05922 Peptidase inhibitor I9 52 128 2.6E-11 T 22-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 Gene3D G3DSA:3.30.70.80 45 118 4.1E-18 T 22-04-2016 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 211 221 - T 22-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site VCLMA_RS00765 a585f38a6b71526c62e6ad0b06a0588f 535 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 359 369 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site VCLMA_RS08235 d00b7d81a533e2ba0b951bbd88b06d1c 270 Gene3D G3DSA:3.30.420.10 94 252 1.9E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS08235 d00b7d81a533e2ba0b951bbd88b06d1c 270 Pfam PF00665 Integrase core domain 99 214 3.1E-33 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VCLMA_RS08235 d00b7d81a533e2ba0b951bbd88b06d1c 270 SUPERFAMILY SSF53098 92 254 4.3E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS08235 d00b7d81a533e2ba0b951bbd88b06d1c 270 PANTHER PTHR32552 11 263 5.4E-77 T 22-04-2016 VCLMA_RS08235 d00b7d81a533e2ba0b951bbd88b06d1c 270 Pfam PF13276 HTH-like domain 22 75 5.3E-8 T 22-04-2016 IPR025948 HTH-like domain VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 425 530 7.2E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 SMART SM00387 420 531 3.2E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 SUPERFAMILY SSF55874 374 531 4.71E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 SUPERFAMILY SSF158472 176 223 1.16E-6 T 22-04-2016 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 Gene3D G3DSA:3.30.565.10 393 532 3.6E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 509 8.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 8.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 488 8.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 528 8.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PANTHER PTHR24423:SF567 343 534 7.4E-138 T 22-04-2016 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PANTHER PTHR24423:SF567 168 222 7.4E-138 T 22-04-2016 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PANTHER PTHR24423:SF567 5 11 7.4E-138 T 22-04-2016 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PANTHER PTHR24423:SF567 278 310 7.4E-138 T 22-04-2016 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 SMART SM00304 174 226 3.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PANTHER PTHR24423 343 534 7.4E-138 T 22-04-2016 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PANTHER PTHR24423 168 222 7.4E-138 T 22-04-2016 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PANTHER PTHR24423 5 11 7.4E-138 T 22-04-2016 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 PANTHER PTHR24423 278 310 7.4E-138 T 22-04-2016 VCLMA_RS05115 c296e37c82a55df98bc48acb1e71d7d9 534 Pfam PF00672 HAMP domain 162 223 3.0E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS00970 de97330c9ac6a1b725522ce65244b45f 319 Gene3D G3DSA:3.40.50.1980 52 139 2.6E-33 T 22-04-2016 VCLMA_RS00970 de97330c9ac6a1b725522ce65244b45f 319 SUPERFAMILY SSF53807 53 312 7.85E-51 T 22-04-2016 VCLMA_RS00970 de97330c9ac6a1b725522ce65244b45f 319 Gene3D G3DSA:3.40.50.1980 143 313 9.9E-45 T 22-04-2016 VCLMA_RS00970 de97330c9ac6a1b725522ce65244b45f 319 PANTHER PTHR30532:SF1 38 313 3.6E-71 T 22-04-2016 VCLMA_RS00970 de97330c9ac6a1b725522ce65244b45f 319 PANTHER PTHR30532 38 313 3.6E-71 T 22-04-2016 VCLMA_RS00970 de97330c9ac6a1b725522ce65244b45f 319 Pfam PF01497 Periplasmic binding protein 56 286 1.4E-21 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 VCLMA_RS00970 de97330c9ac6a1b725522ce65244b45f 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 104 119 6.8E-6 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VCLMA_RS00970 de97330c9ac6a1b725522ce65244b45f 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 73 91 6.8E-6 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VCLMA_RS00970 de97330c9ac6a1b725522ce65244b45f 319 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 293 306 6.8E-6 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein VCLMA_RS11195 b49ef370e278c5babccce8c7604edf27 250 Pfam PF13098 Thioredoxin-like domain 118 246 5.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS11195 b49ef370e278c5babccce8c7604edf27 250 PANTHER PTHR35272:SF3 3 250 9.9E-121 T 22-04-2016 VCLMA_RS11195 b49ef370e278c5babccce8c7604edf27 250 SUPERFAMILY SSF54423 32 87 8.24E-14 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VCLMA_RS11195 b49ef370e278c5babccce8c7604edf27 250 Pfam PF10411 Disulfide bond isomerase protein N-terminus 35 86 9.3E-15 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VCLMA_RS11195 b49ef370e278c5babccce8c7604edf27 250 ProSitePatterns PS00194 Thioredoxin family active site. 125 143 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VCLMA_RS11195 b49ef370e278c5babccce8c7604edf27 250 PANTHER PTHR35272 3 250 9.9E-121 T 22-04-2016 VCLMA_RS11195 b49ef370e278c5babccce8c7604edf27 250 SUPERFAMILY SSF52833 107 247 1.06E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS11195 b49ef370e278c5babccce8c7604edf27 250 Gene3D G3DSA:3.40.30.10 113 248 1.9E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS11195 b49ef370e278c5babccce8c7604edf27 250 Gene3D G3DSA:3.10.450.70 32 88 9.3E-23 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 SUPERFAMILY SSF54292 1 104 1.28E-28 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 Pfam PF13534 4Fe-4S dicluster domain 146 219 2.7E-10 T 22-04-2016 VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 Gene3D G3DSA:1.10.1060.10 105 234 4.2E-46 T 22-04-2016 VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 PANTHER PTHR11921 4 234 1.3E-127 T 22-04-2016 VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 Gene3D G3DSA:3.10.20.30 1 104 1.1E-35 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 8 228 1.3E-85 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 SUPERFAMILY SSF46548 105 232 6.45E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 109 2.7E-29 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VCLMA_RS09625 e619e882d64e47e91ba33b805aa0b62a 236 PANTHER PTHR11921:SF29 4 234 1.3E-127 T 22-04-2016 VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 PANTHER PTHR11751 13 97 1.3E-54 T 22-04-2016 VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 Pfam PF07840 FadR C-terminal domain 72 274 5.4E-68 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 Gene3D G3DSA:1.10.10.10 12 74 5.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 SUPERFAMILY SSF46785 12 74 8.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 Gene3D G3DSA:1.20.120.530 80 137 5.0E-67 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 Gene3D G3DSA:1.20.120.530 178 278 5.0E-67 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 SMART SM00345 12 71 1.6E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 4.8E-119 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.0E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 SUPERFAMILY SSF48008 79 137 4.71E-56 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 SUPERFAMILY SSF48008 178 269 4.71E-56 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 PANTHER PTHR11751:SF402 13 97 1.3E-54 T 22-04-2016 VCLMA_RS08725 0eb295c878e6bffb4fb1cd21912e321a 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 139.566 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 PRINTS PR00175 Sodium/alanine symporter signature 307 325 8.5E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 PRINTS PR00175 Sodium/alanine symporter signature 184 202 8.5E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 PRINTS PR00175 Sodium/alanine symporter signature 412 432 8.5E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 PRINTS PR00175 Sodium/alanine symporter signature 212 231 8.5E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 PRINTS PR00175 Sodium/alanine symporter signature 92 114 8.5E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 PRINTS PR00175 Sodium/alanine symporter signature 353 375 8.5E-52 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 Pfam PF01235 Sodium:alanine symporter family 55 449 1.9E-140 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 PANTHER PTHR30330 1 458 1.1E-239 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 PANTHER PTHR30330:SF3 1 458 1.1E-239 T 22-04-2016 VCLMA_RS06690 e42f0ff8c483ea1159f5e35106d7b511 458 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 443 1.2E-155 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS05075 4711bebb04ee434f68b6c24209970c60 121 SUPERFAMILY SSF47226 11 109 1.02E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS05075 4711bebb04ee434f68b6c24209970c60 121 Pfam PF01627 Hpt domain 24 101 2.7E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS05075 4711bebb04ee434f68b6c24209970c60 121 Gene3D G3DSA:1.20.120.160 10 109 1.6E-22 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS01285 00acc80020d5cd2133f83952f87f736f 307 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 272 1.2E-39 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VCLMA_RS01285 00acc80020d5cd2133f83952f87f736f 307 SUPERFAMILY SSF51735 91 273 1.49E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01285 00acc80020d5cd2133f83952f87f736f 307 Gene3D G3DSA:3.40.50.720 11 120 5.0E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01285 00acc80020d5cd2133f83952f87f736f 307 PANTHER PTHR10996 1 304 1.1E-198 T 22-04-2016 VCLMA_RS01285 00acc80020d5cd2133f83952f87f736f 307 SUPERFAMILY SSF52283 14 105 3.57E-7 T 22-04-2016 VCLMA_RS01285 00acc80020d5cd2133f83952f87f736f 307 Gene3D G3DSA:3.40.50.720 121 275 2.8E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS01285 00acc80020d5cd2133f83952f87f736f 307 PANTHER PTHR10996:SF148 1 304 1.1E-198 T 22-04-2016 VCLMA_RS03835 f2c17db79443f1951339b4ecea3d82ee 227 Pfam PF00072 Response regulator receiver domain 7 117 3.7E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS03835 f2c17db79443f1951339b4ecea3d82ee 227 PIRSF PIRSF006171 3 227 4.0E-80 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 VCLMA_RS03835 f2c17db79443f1951339b4ecea3d82ee 227 PANTHER PTHR26402:SF550 5 171 2.1E-97 T 22-04-2016 VCLMA_RS03835 f2c17db79443f1951339b4ecea3d82ee 227 Pfam PF12431 Transcriptional regulator 134 162 8.6E-11 T 22-04-2016 IPR028141 Transcriptional regulator VCLMA_RS03835 f2c17db79443f1951339b4ecea3d82ee 227 PANTHER PTHR26402 5 171 2.1E-97 T 22-04-2016 VCLMA_RS03835 f2c17db79443f1951339b4ecea3d82ee 227 Gene3D G3DSA:3.40.50.2300 4 128 1.5E-26 T 22-04-2016 VCLMA_RS03835 f2c17db79443f1951339b4ecea3d82ee 227 SMART SM00448 5 118 9.5E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS03835 f2c17db79443f1951339b4ecea3d82ee 227 SUPERFAMILY SSF52172 5 146 1.85E-30 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 Pfam PF01171 PP-loop family 19 198 1.0E-62 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 201 1.1E-53 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 Gene3D G3DSA:3.40.50.620 12 179 5.4E-17 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 Pfam PF09179 TilS substrate binding domain 246 313 1.3E-18 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 PANTHER PTHR11807 18 433 7.0E-101 T 22-04-2016 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 SUPERFAMILY SSF52402 15 230 3.77E-63 T 22-04-2016 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 9 305 23.085 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 Pfam PF11734 TilS substrate C-terminal domain 364 430 2.3E-21 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 362 408 2.5E-15 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 SMART SM00977 362 431 1.3E-22 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 SUPERFAMILY SSF56037 321 433 8.37E-27 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 PANTHER PTHR11807:SF2 18 433 7.0E-101 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VCLMA_RS10410 8fbb6e355de53dd108b46025dbb50ead 440 SUPERFAMILY SSF82829 233 317 6.15E-23 T 22-04-2016 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 Gene3D G3DSA:4.10.640.10 8 74 6.1E-34 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 PANTHER PTHR13479 2 74 4.8E-36 T 22-04-2016 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 4.4E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 4.4E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 4.4E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 4.4E-19 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 2.5E-38 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 SUPERFAMILY SSF46911 3 74 3.66E-30 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 1.0E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.803 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01840 84dbd0c869bdbe4e29abb3925b6d384f 75 Pfam PF01084 Ribosomal protein S18 19 68 2.6E-26 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS05405 cf16c6965e60079435e4ce92ddb639a6 284 SUPERFAMILY SSF53697 93 277 5.87E-40 T 22-04-2016 VCLMA_RS05405 cf16c6965e60079435e4ce92ddb639a6 284 PANTHER PTHR30514:SF7 1 272 2.0E-196 T 22-04-2016 VCLMA_RS05405 cf16c6965e60079435e4ce92ddb639a6 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.0E-28 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VCLMA_RS05405 cf16c6965e60079435e4ce92ddb639a6 284 Gene3D G3DSA:3.40.50.10490 96 271 9.9E-38 T 22-04-2016 VCLMA_RS05405 cf16c6965e60079435e4ce92ddb639a6 284 PANTHER PTHR30514 1 272 2.0E-196 T 22-04-2016 VCLMA_RS05405 cf16c6965e60079435e4ce92ddb639a6 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS05405 cf16c6965e60079435e4ce92ddb639a6 284 Pfam PF01380 SIS domain 124 252 1.6E-25 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS05405 cf16c6965e60079435e4ce92ddb639a6 284 Gene3D G3DSA:1.10.10.10 1 80 2.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04820 02caae5827b0a27876b350c78cac3fb9 153 Pfam PF02391 MoaE protein 7 120 6.1E-38 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS04820 02caae5827b0a27876b350c78cac3fb9 153 PANTHER PTHR23404 4 153 1.3E-44 T 22-04-2016 VCLMA_RS04820 02caae5827b0a27876b350c78cac3fb9 153 PANTHER PTHR23404:SF2 4 153 1.3E-44 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS04820 02caae5827b0a27876b350c78cac3fb9 153 SUPERFAMILY SSF54690 4 149 5.36E-55 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS04820 02caae5827b0a27876b350c78cac3fb9 153 Gene3D G3DSA:3.90.1170.40 3 149 4.4E-58 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS12355 b0e0facc00fd9de41b9e722093794155 144 Pfam PF00581 Rhodanese-like domain 42 135 2.6E-16 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS12355 b0e0facc00fd9de41b9e722093794155 144 PANTHER PTHR12231 1 144 3.6E-46 T 22-04-2016 VCLMA_RS12355 b0e0facc00fd9de41b9e722093794155 144 Gene3D G3DSA:3.40.250.10 22 143 9.4E-27 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS12355 b0e0facc00fd9de41b9e722093794155 144 SUPERFAMILY SSF52821 15 143 1.7E-28 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS12355 b0e0facc00fd9de41b9e722093794155 144 PANTHER PTHR12231:SF138 1 144 3.6E-46 T 22-04-2016 VCLMA_RS12355 b0e0facc00fd9de41b9e722093794155 144 SMART SM00450 40 138 1.6E-19 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS09515 dc28bcd01387f449b16dc27c3db64845 239 PIRSF PIRSF002884 13 239 1.4E-93 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VCLMA_RS09515 dc28bcd01387f449b16dc27c3db64845 239 SUPERFAMILY SSF75708 28 238 5.49E-66 T 22-04-2016 VCLMA_RS09515 dc28bcd01387f449b16dc27c3db64845 239 PANTHER PTHR22617 65 239 1.1E-94 T 22-04-2016 VCLMA_RS09515 dc28bcd01387f449b16dc27c3db64845 239 PANTHER PTHR22617:SF35 65 239 1.1E-94 T 22-04-2016 VCLMA_RS09515 dc28bcd01387f449b16dc27c3db64845 239 Gene3D G3DSA:1.10.287.500 58 189 2.9E-50 T 22-04-2016 VCLMA_RS09515 dc28bcd01387f449b16dc27c3db64845 239 Pfam PF04344 Chemotaxis phosphatase, CheZ 36 239 1.4E-76 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- VCLMA_RS05535 a410e2ed6fdb34d2dea52c8b59cc797a 45 ProDom PD926058 BIOSYNTHESIS PEPTIDE LEADER AROMATIC VC1176 VV1222 OPERON ACID AMINO AMINO-ACID 10 45 3.0E-6 T 22-04-2016 IPR012639 Tryptophan operon leader peptide VCLMA_RS05535 a410e2ed6fdb34d2dea52c8b59cc797a 45 Pfam PF08056 Tryptophan operon leader peptide 10 45 4.4E-12 T 22-04-2016 IPR012639 Tryptophan operon leader peptide VCLMA_RS12090 ef0477152603af29d9249d90f937916d 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.541 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12090 ef0477152603af29d9249d90f937916d 209 Pfam PF00297 Ribosomal protein L3 67 182 1.0E-15 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12090 ef0477152603af29d9249d90f937916d 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 3.6E-95 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12090 ef0477152603af29d9249d90f937916d 209 PANTHER PTHR11229 1 208 8.0E-127 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12090 ef0477152603af29d9249d90f937916d 209 Gene3D G3DSA:2.40.30.10 3 32 8.2E-11 T 22-04-2016 VCLMA_RS12090 ef0477152603af29d9249d90f937916d 209 Gene3D G3DSA:2.40.30.10 158 207 8.2E-11 T 22-04-2016 VCLMA_RS12090 ef0477152603af29d9249d90f937916d 209 Gene3D G3DSA:4.10.960.10 77 157 2.6E-38 T 22-04-2016 VCLMA_RS12090 ef0477152603af29d9249d90f937916d 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site VCLMA_RS12090 ef0477152603af29d9249d90f937916d 209 SUPERFAMILY SSF50447 1 208 2.38E-84 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain VCLMA_RS06145 26ddcc9fbed59aeaaa9dfdbd23c9a8a6 204 SUPERFAMILY SSF55811 18 190 7.99E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS06145 26ddcc9fbed59aeaaa9dfdbd23c9a8a6 204 Pfam PF00293 NUDIX domain 46 149 1.1E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VCLMA_RS06145 26ddcc9fbed59aeaaa9dfdbd23c9a8a6 204 Gene3D G3DSA:3.90.79.10 31 194 2.0E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS06145 26ddcc9fbed59aeaaa9dfdbd23c9a8a6 204 PANTHER PTHR12992 38 190 4.4E-51 T 22-04-2016 VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 85 2.1E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 PANTHER PTHR33705:SF2 1 92 1.4E-42 T 22-04-2016 VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 1.8E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 SUPERFAMILY SSF55594 5 91 4.58E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 3.3E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 3.3E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 3.3E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 Gene3D G3DSA:3.30.1340.10 4 90 6.0E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS11785 9c3d661e9c7b5522cec7609041069c7b 92 PANTHER PTHR33705 1 92 1.4E-42 T 22-04-2016 VCLMA_RS11975 a7cce014599a851da5a362b0f6ba5fe0 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site VCLMA_RS11975 a7cce014599a851da5a362b0f6ba5fe0 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 4.2E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11975 a7cce014599a851da5a362b0f6ba5fe0 129 Gene3D G3DSA:3.30.420.80 7 129 1.6E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS11975 a7cce014599a851da5a362b0f6ba5fe0 129 PIRSF PIRSF002131 1 129 1.8E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS11975 a7cce014599a851da5a362b0f6ba5fe0 129 PANTHER PTHR11759 11 129 5.5E-71 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS11975 a7cce014599a851da5a362b0f6ba5fe0 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.753 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS11975 a7cce014599a851da5a362b0f6ba5fe0 129 SUPERFAMILY SSF53137 14 129 6.54E-48 T 22-04-2016 VCLMA_RS11975 a7cce014599a851da5a362b0f6ba5fe0 129 Pfam PF00411 Ribosomal protein S11 19 128 1.5E-52 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS09225 23abe9abe9c792c43a54920da269494c 405 PANTHER PTHR18964:SF128 65 402 4.9E-189 T 22-04-2016 VCLMA_RS09225 23abe9abe9c792c43a54920da269494c 405 SUPERFAMILY SSF46785 10 77 1.22E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09225 23abe9abe9c792c43a54920da269494c 405 PANTHER PTHR18964 65 402 4.9E-189 T 22-04-2016 VCLMA_RS09225 23abe9abe9c792c43a54920da269494c 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 22-04-2016 IPR000600 ROK family VCLMA_RS09225 23abe9abe9c792c43a54920da269494c 405 Gene3D G3DSA:3.30.420.40 86 221 8.3E-34 T 22-04-2016 VCLMA_RS09225 23abe9abe9c792c43a54920da269494c 405 Gene3D G3DSA:1.10.10.10 11 80 5.4E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09225 23abe9abe9c792c43a54920da269494c 405 Pfam PF00480 ROK family 88 390 3.2E-68 T 22-04-2016 IPR000600 ROK family VCLMA_RS09225 23abe9abe9c792c43a54920da269494c 405 SUPERFAMILY SSF53067 86 393 8.17E-56 T 22-04-2016 VCLMA_RS09225 23abe9abe9c792c43a54920da269494c 405 Gene3D G3DSA:3.30.420.40 222 376 8.4E-53 T 22-04-2016 VCLMA_RS04360 1d4d937744f678c3828ac1b84d53855c 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 464 2.1E-153 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VCLMA_RS04360 1d4d937744f678c3828ac1b84d53855c 464 Pfam PF13727 CoA-binding domain 62 238 7.2E-48 T 22-04-2016 VCLMA_RS04360 1d4d937744f678c3828ac1b84d53855c 464 Pfam PF02397 Bacterial sugar transferase 274 456 6.3E-57 T 22-04-2016 IPR003362 Bacterial sugar transferase VCLMA_RS04360 1d4d937744f678c3828ac1b84d53855c 464 PANTHER PTHR30576 1 464 1.8E-219 T 22-04-2016 VCLMA_RS04360 1d4d937744f678c3828ac1b84d53855c 464 Gene3D G3DSA:3.40.50.720 141 225 2.4E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04360 1d4d937744f678c3828ac1b84d53855c 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 464 6.1E-176 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 VCLMA_RS04360 1d4d937744f678c3828ac1b84d53855c 464 PANTHER PTHR30576:SF0 1 464 1.8E-219 T 22-04-2016 VCLMA_RS04360 1d4d937744f678c3828ac1b84d53855c 464 SUPERFAMILY SSF51735 142 267 5.12E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS08530 078e1bc398d157328636e84802df53fb 706 PANTHER PTHR32089:SF34 22 706 5.6E-200 T 22-04-2016 VCLMA_RS08530 078e1bc398d157328636e84802df53fb 706 Gene3D G3DSA:1.10.287.950 458 674 2.9E-49 T 22-04-2016 VCLMA_RS08530 078e1bc398d157328636e84802df53fb 706 Pfam PF00672 HAMP domain 356 424 6.2E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS08530 078e1bc398d157328636e84802df53fb 706 SMART SM00283 443 704 6.4E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS08530 078e1bc398d157328636e84802df53fb 706 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 490 703 7.7E-42 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS08530 078e1bc398d157328636e84802df53fb 706 SMART SM00304 374 428 6.0E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS08530 078e1bc398d157328636e84802df53fb 706 SUPERFAMILY SSF58104 396 705 8.37E-70 T 22-04-2016 VCLMA_RS08530 078e1bc398d157328636e84802df53fb 706 Gene3D G3DSA:3.30.450.20 211 339 2.3E-5 T 22-04-2016 VCLMA_RS08530 078e1bc398d157328636e84802df53fb 706 PANTHER PTHR32089 22 706 5.6E-200 T 22-04-2016 VCLMA_RS08115 0cca7bc76af50022f8e5b8de41597453 483 PANTHER PTHR11699:SF49 8 479 2.0E-273 T 22-04-2016 VCLMA_RS08115 0cca7bc76af50022f8e5b8de41597453 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VCLMA_RS08115 0cca7bc76af50022f8e5b8de41597453 483 Gene3D G3DSA:3.40.309.10 268 452 7.5E-64 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VCLMA_RS08115 0cca7bc76af50022f8e5b8de41597453 483 Gene3D G3DSA:3.40.605.10 12 267 6.9E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS08115 0cca7bc76af50022f8e5b8de41597453 483 PANTHER PTHR11699 8 479 2.0E-273 T 22-04-2016 VCLMA_RS08115 0cca7bc76af50022f8e5b8de41597453 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VCLMA_RS08115 0cca7bc76af50022f8e5b8de41597453 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 475 4.8E-204 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 VCLMA_RS08115 0cca7bc76af50022f8e5b8de41597453 483 Pfam PF00171 Aldehyde dehydrogenase family 24 476 1.1E-163 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS08115 0cca7bc76af50022f8e5b8de41597453 483 SUPERFAMILY SSF53720 6 480 3.93E-165 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 4.2E-88 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 SMART SM00986 49 210 8.7E-41 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 SMART SM00987 49 210 8.7E-41 T 22-04-2016 VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 2.0E-25 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 PANTHER PTHR11264 1 224 2.2E-175 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 SUPERFAMILY SSF52141 6 221 2.83E-96 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 Gene3D G3DSA:3.40.470.10 6 221 2.5E-101 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 PANTHER PTHR11264:SF10 1 224 2.2E-175 T 22-04-2016 VCLMA_RS10930 4748c86e8582b7bfbd421692e5f3cbb6 226 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.257 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 VCLMA_RS10970 512762e39708231879d9e71fba32a3e0 129 Pfam PF11697 Protein of unknown function (DUF3293) 31 99 3.5E-18 T 22-04-2016 IPR021710 Protein of unknown function DUF3293 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 Pfam PF14450 Cell division protein FtsA 207 381 9.5E-24 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 SMART SM00842 10 196 1.2E-96 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.420.40 5 83 2.1E-22 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.420.40 168 208 2.1E-22 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 SUPERFAMILY SSF53067 198 384 1.15E-43 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 SUPERFAMILY SSF53067 8 221 4.4E-60 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.7E-28 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 PIRSF PIRSF003101 1 420 8.6E-146 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.420.40 298 359 7.3E-26 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.420.40 209 234 7.3E-26 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.30.1490.110 100 166 1.6E-13 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.102 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 PANTHER PTHR32432:SF4 1 419 6.1E-166 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 4.1E-151 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 PANTHER PTHR32432 1 419 6.1E-166 T 22-04-2016 VCLMA_RS11105 2cd2ef44fc077dd758b8641f74693fd7 420 Gene3D G3DSA:3.90.640.10 235 297 2.3E-19 T 22-04-2016 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 Pfam PF01645 Conserved region in glutamate synthase 817 1187 2.9E-152 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 Gene3D G3DSA:3.20.20.70 455 804 1.4E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 Gene3D G3DSA:3.60.20.10 21 454 4.1E-183 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 Gene3D G3DSA:3.20.20.70 835 1220 1.3E-181 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 SUPERFAMILY SSF51395 461 1220 6.96E-271 T 22-04-2016 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 PANTHER PTHR11938:SF1 10 1502 0.0 T 22-04-2016 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 Pfam PF04898 Glutamate synthase central domain 472 756 4.1E-116 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 PANTHER PTHR11938 10 1502 0.0 T 22-04-2016 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 Pfam PF00310 Glutamine amidotransferases class-II 21 443 4.7E-186 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 Pfam PF01493 GXGXG motif 1267 1451 5.8E-82 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 SUPERFAMILY SSF56235 21 447 4.01E-152 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 SUPERFAMILY SSF69336 1235 1498 3.4E-94 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VCLMA_RS10995 841e36057c2b7ce6d77acf24b9759f8e 1514 Gene3D G3DSA:2.160.20.60 1241 1508 2.9E-106 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 VCLMA_RS00025 7f32c59ba6715b7378857e0be3b0c182 85 Pfam PF01809 Haemolytic domain 10 75 1.2E-29 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor VCLMA_RS00025 7f32c59ba6715b7378857e0be3b0c182 85 PANTHER PTHR33383 1 84 7.8E-46 T 22-04-2016 VCLMA_RS00025 7f32c59ba6715b7378857e0be3b0c182 85 SMART SM01234 8 75 8.0E-44 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor VCLMA_RS00025 7f32c59ba6715b7378857e0be3b0c182 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 13 82 1.7E-32 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor VCLMA_RS00025 7f32c59ba6715b7378857e0be3b0c182 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 1.0E-25 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor VCLMA_RS00025 7f32c59ba6715b7378857e0be3b0c182 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.888 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.685 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 SMART SM00967 5 81 8.6E-21 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 Gene3D G3DSA:3.30.1330.30 2 77 1.5E-24 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 5.6E-20 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 7.0E-39 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 Gene3D G3DSA:3.40.1280.10 91 244 4.0E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 4.6E-86 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 SUPERFAMILY SSF75217 69 244 6.15E-48 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 PANTHER PTHR12029 4 244 2.0E-81 T 22-04-2016 VCLMA_RS12100 af187314b4b77c0f175c17725d1fc685 247 SUPERFAMILY SSF55315 3 77 1.41E-19 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.353 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 PANTHER PTHR11410 135 270 1.5E-102 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 PANTHER PTHR11410 1 119 1.5E-102 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 PANTHER PTHR11410:SF7 135 270 1.5E-102 T 22-04-2016 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 PANTHER PTHR11410:SF7 1 119 1.5E-102 T 22-04-2016 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 Pfam PF00119 ATP synthase A chain 44 262 4.2E-58 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 Gene3D G3DSA:1.20.120.220 94 267 3.6E-60 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 SUPERFAMILY SSF81336 93 262 1.15E-49 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 1.0E-44 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 5.0E-13 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 5.0E-13 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 5.0E-13 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 VCLMA_RS12975 b38a2472baab8f524975350c6efd4c49 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 SUPERFAMILY SSF54913 1 112 5.4E-46 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 PANTHER PTHR30115 1 112 4.2E-84 T 22-04-2016 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 PIRSF PIRSF039144 1 112 2.0E-56 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 PANTHER PTHR30115:SF15 1 112 4.2E-84 T 22-04-2016 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 Gene3D G3DSA:3.30.70.120 1 112 1.7E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.0E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 83 103 7.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 52 75 7.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 2 17 7.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 PRINTS PR00340 P-II protein signature 23 41 7.1E-42 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VCLMA_RS02945 f0a5f4d07edca635e279700d6e82da6e 112 SMART SM00938 4 105 1.3E-69 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 Gene3D G3DSA:3.30.460.10 643 815 1.9E-59 T 22-04-2016 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 Gene3D G3DSA:3.30.460.10 116 289 9.7E-62 T 22-04-2016 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 SUPERFAMILY SSF81301 529 819 8.5E-87 T 22-04-2016 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 SUPERFAMILY SSF81593 821 947 4.39E-31 T 22-04-2016 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 PANTHER PTHR30621 15 946 0.0 T 22-04-2016 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 SUPERFAMILY SSF81593 291 440 2.67E-44 T 22-04-2016 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 557 809 1.3E-100 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 34 280 4.0E-100 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 Pfam PF08335 GlnD PII-uridylyltransferase 301 440 1.4E-45 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 Pfam PF08335 GlnD PII-uridylyltransferase 846 917 2.1E-7 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 SUPERFAMILY SSF81301 24 290 1.85E-89 T 22-04-2016 VCLMA_RS11290 abab97ba6f782673c0900671d38ad101 948 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 31 948 19.367 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 PANTHER PTHR23117 1 202 2.8E-103 T 22-04-2016 VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 Pfam PF00625 Guanylate kinase 5 185 1.0E-59 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 Gene3D G3DSA:3.40.50.300 2 17 3.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 Gene3D G3DSA:3.40.50.300 88 204 3.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 Gene3D G3DSA:3.30.63.10 42 87 2.3E-28 T 22-04-2016 VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 Gene3D G3DSA:3.40.50.300 18 41 6.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 SUPERFAMILY SSF52540 3 189 1.13E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 2.5E-75 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.662 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 SMART SM00072 3 187 5.1E-73 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VCLMA_RS12610 0a9337da9081babd441d3c1666c82d38 207 PANTHER PTHR23117:SF13 1 202 2.8E-103 T 22-04-2016 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 PANTHER PTHR32089 1 663 0.0 T 22-04-2016 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 526 3.1E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 3.1E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 3.1E-23 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 PANTHER PTHR32089:SF58 1 663 0.0 T 22-04-2016 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 Pfam PF00672 HAMP domain 315 383 1.6E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 462 661 7.1E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 SUPERFAMILY SSF58104 354 663 3.92E-72 T 22-04-2016 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 Gene3D G3DSA:1.10.287.950 416 632 3.2E-54 T 22-04-2016 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 SMART SM00283 401 662 7.0E-71 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS08715 df7daf11b930eaff3ea5c2ff82905bf5 663 SMART SM00304 334 386 3.1E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 SMART SM00422 2 71 4.7E-31 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 Gene3D G3DSA:1.10.1660.10 1 57 7.8E-28 T 22-04-2016 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 Gene3D G3DSA:1.10.1660.10 58 132 2.1E-25 T 22-04-2016 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 PANTHER PTHR30204 1 132 8.4E-61 T 22-04-2016 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 Pfam PF13411 MerR HTH family regulatory protein 3 69 5.0E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 SUPERFAMILY SSF46955 2 121 5.49E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.2E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.2E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.2E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 PANTHER PTHR30204:SF18 1 132 8.4E-61 T 22-04-2016 VCLMA_RS01335 91678917580df5b7e2c78cdb8af87483 132 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 132 1.0E-63 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:3.40.1380.20 327 468 8.7E-44 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF52935 323 469 1.18E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 9.4E-80 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 9.4E-80 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 9.4E-80 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 9.4E-80 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 9.4E-80 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 9.4E-80 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 9.4E-80 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 4.8E-188 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 PANTHER PTHR11817 1 464 7.8E-256 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 7.7E-155 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF50800 70 167 6.28E-30 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:2.40.33.10 73 168 5.4E-34 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF51621 1 74 3.14E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 SUPERFAMILY SSF51621 156 338 3.14E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:3.20.20.60 169 326 3.0E-117 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 Gene3D G3DSA:3.20.20.60 2 72 3.0E-117 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.3E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02455 d957f5ff367cc8df43283da2bfe21417 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS05400 d4034e0b8193a385c65b0fee44dd7b6b 421 SUPERFAMILY SSF56796 1 386 1.7E-85 T 22-04-2016 VCLMA_RS05400 d4034e0b8193a385c65b0fee44dd7b6b 421 Gene3D G3DSA:3.40.50.1970 1 179 6.9E-49 T 22-04-2016 VCLMA_RS05400 d4034e0b8193a385c65b0fee44dd7b6b 421 Gene3D G3DSA:1.20.1090.10 188 387 1.4E-37 T 22-04-2016 VCLMA_RS05400 d4034e0b8193a385c65b0fee44dd7b6b 421 PANTHER PTHR11496:SF68 1 392 1.6E-164 T 22-04-2016 VCLMA_RS05400 d4034e0b8193a385c65b0fee44dd7b6b 421 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 378 7.2E-84 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VCLMA_RS05400 d4034e0b8193a385c65b0fee44dd7b6b 421 PANTHER PTHR11496 1 392 1.6E-164 T 22-04-2016 VCLMA_RS09640 0419fff70ad51b913328021604811de3 130 Gene3D G3DSA:1.20.1300.10 6 130 2.2E-41 T 22-04-2016 VCLMA_RS09640 0419fff70ad51b913328021604811de3 130 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 9 127 4.7E-40 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 VCLMA_RS09640 0419fff70ad51b913328021604811de3 130 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 8 124 9.7E-30 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 VCLMA_RS09640 0419fff70ad51b913328021604811de3 130 SUPERFAMILY SSF81343 8 130 1.96E-34 T 22-04-2016 VCLMA_RS09640 0419fff70ad51b913328021604811de3 130 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 86 99 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 VCLMA_RS09640 0419fff70ad51b913328021604811de3 130 PANTHER PTHR10978:SF4 6 130 2.1E-75 T 22-04-2016 VCLMA_RS09640 0419fff70ad51b913328021604811de3 130 PANTHER PTHR10978 6 130 2.1E-75 T 22-04-2016 VCLMA_RS09640 0419fff70ad51b913328021604811de3 130 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 11 35 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 VCLMA_RS09640 0419fff70ad51b913328021604811de3 130 PIRSF PIRSF000178 2 130 2.3E-32 T 22-04-2016 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PANTHER PTHR30386:SF8 164 453 7.1E-142 T 22-04-2016 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PANTHER PTHR30386:SF8 18 133 7.1E-142 T 22-04-2016 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 374 397 3.5E-55 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 3.5E-55 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 432 452 3.5E-55 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 417 432 3.5E-55 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 350 374 3.5E-55 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 71 3.5E-55 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 317 338 3.5E-55 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 37 453 8.2E-140 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 Pfam PF13437 HlyD family secretion protein 305 420 1.2E-20 T 22-04-2016 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PANTHER PTHR30386 164 453 7.1E-142 T 22-04-2016 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 PANTHER PTHR30386 18 133 7.1E-142 T 22-04-2016 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 Gene3D G3DSA:2.40.50.100 83 112 3.0E-12 T 22-04-2016 VCLMA_RS06820 39262ddb2f2d3a81e1c5d57a7c3abcb1 453 Gene3D G3DSA:2.40.50.100 302 337 3.0E-12 T 22-04-2016 VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 1.2E-18 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 1.2E-18 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 1.2E-18 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 1.2E-18 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 PANTHER PTHR11444 4 456 0.0 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 1.3E-51 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 Gene3D G3DSA:1.20.200.10 120 390 8.8E-90 T 22-04-2016 VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 2.3E-151 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 Pfam PF00206 Lyase 14 313 4.0E-72 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 Gene3D G3DSA:1.10.275.10 1 119 2.3E-49 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 Gene3D G3DSA:1.10.40.30 391 446 7.6E-34 T 22-04-2016 VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 PANTHER PTHR11444:SF17 4 456 0.0 T 22-04-2016 VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 SUPERFAMILY SSF48557 4 449 3.3E-109 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VCLMA_RS05295 b25d1d7fd497141f699877046ad131ae 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 Gene3D G3DSA:3.30.499.10 684 859 2.9E-53 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 SUPERFAMILY SSF52016 162 372 2.55E-69 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 Gene3D G3DSA:3.40.1060.10 520 682 3.3E-85 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 PANTHER PTHR11670 305 863 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 SUPERFAMILY SSF74778 2 160 3.14E-68 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 Gene3D G3DSA:3.30.499.10 402 519 1.1E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 PANTHER PTHR11670:SF39 305 863 0.0 T 22-04-2016 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 PIRSF PIRSF036687 1 859 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 SUPERFAMILY SSF53732 379 860 2.09E-147 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.7E-66 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 2.3E-41 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 853 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 1.2E-96 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 VCLMA_RS02935 7be3dd24598de5369b0a8cabe6796eea 865 Gene3D G3DSA:3.20.19.10 162 361 7.6E-94 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VCLMA_RS02875 021be6b09b391dc380864082c8f66045 256 PANTHER PTHR30413 3 256 1.8E-164 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VCLMA_RS02875 021be6b09b391dc380864082c8f66045 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 3.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VCLMA_RS02875 021be6b09b391dc380864082c8f66045 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 3.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VCLMA_RS02875 021be6b09b391dc380864082c8f66045 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 3.4E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VCLMA_RS02875 021be6b09b391dc380864082c8f66045 256 Pfam PF01061 ABC-2 type transporter 8 218 6.7E-40 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 VCLMA_RS02875 021be6b09b391dc380864082c8f66045 256 PANTHER PTHR30413:SF2 3 256 1.8E-164 T 22-04-2016 VCLMA_RS02875 021be6b09b391dc380864082c8f66045 256 PIRSF PIRSF006648 8 252 1.1E-25 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR01900 YidC translocation/secretion protein signature 337 353 1.1E-26 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR01900 YidC translocation/secretion protein signature 466 481 1.1E-26 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR01900 YidC translocation/secretion protein signature 486 510 1.1E-26 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PANTHER PTHR12428:SF14 169 539 1.3E-142 T 22-04-2016 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 533 25.987 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR00701 60kDa inner membrane protein signature 215 233 2.4E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR00701 60kDa inner membrane protein signature 322 342 2.4E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR00701 60kDa inner membrane protein signature 497 520 2.4E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.4E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR00701 60kDa inner membrane protein signature 250 265 2.4E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR00701 60kDa inner membrane protein signature 72 93 2.4E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR00701 60kDa inner membrane protein signature 413 436 2.4E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR00701 60kDa inner membrane protein signature 162 182 2.4E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PRINTS PR00701 60kDa inner membrane protein signature 460 482 2.4E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 PANTHER PTHR12428 169 539 1.3E-142 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 350 5.7E-111 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 351 530 6.0E-74 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 Pfam PF14849 YidC periplasmic domain 66 341 1.1E-82 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VCLMA_RS00020 05a769807991a76238623b08bb464ba4 541 Pfam PF02096 60Kd inner membrane protein 352 531 5.0E-64 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 Gene3D G3DSA:1.10.730.10 647 839 6.0E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 853 7.3E-292 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 Gene3D G3DSA:3.90.740.10 207 394 3.7E-54 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 Pfam PF08264 Anticodon-binding domain of tRNA 691 853 2.2E-25 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 Gene3D G3DSA:3.40.50.620 411 643 2.2E-136 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 Gene3D G3DSA:3.40.50.620 14 200 2.2E-136 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PANTHER PTHR11946 288 919 0.0 T 22-04-2016 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PANTHER PTHR11946 237 262 0.0 T 22-04-2016 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PANTHER PTHR11946 6 215 0.0 T 22-04-2016 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PANTHER PTHR11946:SF11 288 919 0.0 T 22-04-2016 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PANTHER PTHR11946:SF11 237 262 0.0 T 22-04-2016 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PANTHER PTHR11946:SF11 6 215 0.0 T 22-04-2016 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 647 1.4E-225 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 SUPERFAMILY SSF52374 408 653 2.09E-136 T 22-04-2016 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 SUPERFAMILY SSF52374 4 202 2.09E-136 T 22-04-2016 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 SUPERFAMILY SSF50677 205 408 4.5E-53 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 SUPERFAMILY SSF47323 658 940 6.35E-73 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 940 21.453 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 567 576 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 406 421 4.8E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 VCLMA_RS03325 68781f67ace2c876f98011bdf6f3a59b 949 Pfam PF06827 Zinc finger found in FPG and IleRS 910 937 1.6E-7 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type VCLMA_RS03490 2838767b31fb6e679735b63a563d4f13 84 SUPERFAMILY SSF54862 5 72 3.63E-17 T 22-04-2016 VCLMA_RS03490 2838767b31fb6e679735b63a563d4f13 84 PANTHER PTHR24960 1 81 2.0E-30 T 22-04-2016 VCLMA_RS03490 2838767b31fb6e679735b63a563d4f13 84 PANTHER PTHR24960:SF38 1 81 2.0E-30 T 22-04-2016 VCLMA_RS03490 2838767b31fb6e679735b63a563d4f13 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS03490 2838767b31fb6e679735b63a563d4f13 84 Gene3D G3DSA:3.30.70.20 5 74 8.1E-17 T 22-04-2016 VCLMA_RS03490 2838767b31fb6e679735b63a563d4f13 84 Pfam PF12838 4Fe-4S dicluster domain 8 55 3.8E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.643 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.5E-64 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 SUPERFAMILY SSF46906 68 141 2.09E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 SMART SM00649 9 141 9.2E-83 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 PANTHER PTHR11661 1 142 1.7E-72 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 Gene3D G3DSA:1.10.10.250 73 141 1.8E-28 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 SUPERFAMILY SSF54747 3 73 3.92E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 5.0E-17 T 22-04-2016 VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 Gene3D G3DSA:3.30.1550.10 2 72 3.0E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.8E-22 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VCLMA_RS01590 13b836044ce56c1591ba469aae902f14 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.7E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal VCLMA_RS02635 7a6f27f8436717385bc9ae8173fc6a03 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VCLMA_RS02635 7a6f27f8436717385bc9ae8173fc6a03 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 22-04-2016 VCLMA_RS02635 7a6f27f8436717385bc9ae8173fc6a03 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 6.2E-30 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VCLMA_RS02635 7a6f27f8436717385bc9ae8173fc6a03 65 Hamap MF_00167 Carbon storage regulator [csrA]. 1 62 20.37 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VCLMA_RS02635 7a6f27f8436717385bc9ae8173fc6a03 65 PANTHER PTHR34984:SF1 1 55 1.5E-31 T 22-04-2016 VCLMA_RS02635 7a6f27f8436717385bc9ae8173fc6a03 65 Pfam PF02599 Global regulator protein family 1 52 2.1E-26 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 VCLMA_RS02635 7a6f27f8436717385bc9ae8173fc6a03 65 PANTHER PTHR34984 1 55 1.5E-31 T 22-04-2016 VCLMA_RS03155 75a43922776523ba1ff22f734efbf21e 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.395 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 VCLMA_RS03155 75a43922776523ba1ff22f734efbf21e 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.5E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 VCLMA_RS03155 75a43922776523ba1ff22f734efbf21e 89 Gene3D G3DSA:1.10.287.10 3 89 2.2E-38 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 VCLMA_RS03155 75a43922776523ba1ff22f734efbf21e 89 SUPERFAMILY SSF47060 3 89 3.24E-34 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 VCLMA_RS03155 75a43922776523ba1ff22f734efbf21e 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 6.0E-40 T 22-04-2016 VCLMA_RS03155 75a43922776523ba1ff22f734efbf21e 89 Pfam PF00312 Ribosomal protein S15 8 88 6.8E-36 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03155 75a43922776523ba1ff22f734efbf21e 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03155 75a43922776523ba1ff22f734efbf21e 89 SMART SM01387 8 88 8.8E-51 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03155 75a43922776523ba1ff22f734efbf21e 89 PANTHER PTHR23321 1 89 4.4E-45 T 22-04-2016 VCLMA_RS12930 d0f26982ba12df7488d3e038271bd9ae 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 370 8.4E-85 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VCLMA_RS12930 d0f26982ba12df7488d3e038271bd9ae 400 Pfam PF07690 Major Facilitator Superfamily 14 348 3.7E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS12930 d0f26982ba12df7488d3e038271bd9ae 400 PANTHER PTHR23502 1 370 3.2E-209 T 22-04-2016 VCLMA_RS12930 d0f26982ba12df7488d3e038271bd9ae 400 Gene3D G3DSA:1.20.1250.20 202 382 2.8E-11 T 22-04-2016 VCLMA_RS12930 d0f26982ba12df7488d3e038271bd9ae 400 Gene3D G3DSA:1.20.1250.20 9 177 2.0E-22 T 22-04-2016 VCLMA_RS12930 d0f26982ba12df7488d3e038271bd9ae 400 SUPERFAMILY SSF103473 5 379 2.35E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS12930 d0f26982ba12df7488d3e038271bd9ae 400 PANTHER PTHR23502:SF28 1 370 3.2E-209 T 22-04-2016 VCLMA_RS07850 bb435a6eba44e197ade9fe3b25094a5e 262 Pfam PF00005 ABC transporter 30 178 2.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS07850 bb435a6eba44e197ade9fe3b25094a5e 262 PANTHER PTHR24220:SF81 6 262 1.3E-124 T 22-04-2016 VCLMA_RS07850 bb435a6eba44e197ade9fe3b25094a5e 262 PANTHER PTHR24220 6 262 1.3E-124 T 22-04-2016 VCLMA_RS07850 bb435a6eba44e197ade9fe3b25094a5e 262 SUPERFAMILY SSF52540 4 252 8.57E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07850 bb435a6eba44e197ade9fe3b25094a5e 262 Gene3D G3DSA:3.40.50.300 2 252 1.2E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07850 bb435a6eba44e197ade9fe3b25094a5e 262 SMART SM00382 38 227 2.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS00910 3414381e9dff090cbe83c9e14726a041 680 SUPERFAMILY SSF55486 1 677 2.09E-210 T 22-04-2016 VCLMA_RS00910 3414381e9dff090cbe83c9e14726a041 680 Gene3D G3DSA:3.40.390.10 359 504 3.2E-61 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 VCLMA_RS00910 3414381e9dff090cbe83c9e14726a041 680 PANTHER PTHR11804 2 678 0.0 T 22-04-2016 VCLMA_RS00910 3414381e9dff090cbe83c9e14726a041 680 PANTHER PTHR11804:SF8 2 678 0.0 T 22-04-2016 VCLMA_RS00910 3414381e9dff090cbe83c9e14726a041 680 Pfam PF01432 Peptidase family M3 222 677 3.9E-165 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 VCLMA_RS00910 3414381e9dff090cbe83c9e14726a041 680 Gene3D G3DSA:1.10.1370.10 505 678 4.1E-141 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VCLMA_RS00910 3414381e9dff090cbe83c9e14726a041 680 Gene3D G3DSA:1.10.1370.10 140 349 4.1E-141 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VCLMA_RS00910 3414381e9dff090cbe83c9e14726a041 680 Gene3D G3DSA:1.20.1050.40 9 138 6.0E-29 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 3.2E-47 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 PANTHER PTHR30525 1 400 2.4E-222 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 396 3.3E-163 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 SUPERFAMILY SSF55347 126 274 3.2E-62 T 22-04-2016 VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 Gene3D G3DSA:3.40.50.720 1 150 5.1E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 SUPERFAMILY SSF51735 2 150 2.02E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 46.506 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 SUPERFAMILY SSF69055 302 399 1.11E-28 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 PIRSF PIRSF006205 1 402 3.3E-153 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 1.3E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 2.7E-38 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS10465 76dffdd0a5db31220cc06ebca65cb194 402 Gene3D G3DSA:1.10.1740.10 313 399 3.9E-27 T 22-04-2016 VCLMA_RS02755 3b384f8ba49c6533525908bcfc0a2dd9 247 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 247 116.979 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VCLMA_RS02755 3b384f8ba49c6533525908bcfc0a2dd9 247 SUPERFAMILY SSF75217 1 244 2.22E-101 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VCLMA_RS02755 3b384f8ba49c6533525908bcfc0a2dd9 247 PIRSF PIRSF000386 1 247 2.6E-101 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VCLMA_RS02755 3b384f8ba49c6533525908bcfc0a2dd9 247 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.1E-69 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VCLMA_RS02755 3b384f8ba49c6533525908bcfc0a2dd9 247 Gene3D G3DSA:1.10.1270.20 163 244 7.6E-35 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VCLMA_RS02755 3b384f8ba49c6533525908bcfc0a2dd9 247 PANTHER PTHR32125:SF1 1 228 4.2E-119 T 22-04-2016 VCLMA_RS02755 3b384f8ba49c6533525908bcfc0a2dd9 247 Gene3D G3DSA:3.40.1280.10 1 160 7.9E-68 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCLMA_RS02755 3b384f8ba49c6533525908bcfc0a2dd9 247 PANTHER PTHR32125 1 228 4.2E-119 T 22-04-2016 VCLMA_RS02755 3b384f8ba49c6533525908bcfc0a2dd9 247 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 1.3E-107 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 Pfam PF01479 S4 domain 18 65 2.7E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 SUPERFAMILY SSF55120 77 309 7.81E-79 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 312 5.6E-106 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 Gene3D G3DSA:3.10.290.10 18 69 3.7E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 SUPERFAMILY SSF55174 17 69 2.19E-10 T 22-04-2016 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 Pfam PF00849 RNA pseudouridylate synthase 92 241 1.8E-32 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 PANTHER PTHR11079:SF73 6 323 6.9E-152 T 22-04-2016 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 PANTHER PTHR11079 6 323 6.9E-152 T 22-04-2016 VCLMA_RS03440 21f16f18d4325c80b3f12be2f5ab860a 324 SMART SM00363 18 83 3.3E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS09445 c7768717b07c5201974234fcdcdf03b3 158 PANTHER PTHR30009 12 153 1.6E-35 T 22-04-2016 VCLMA_RS09445 c7768717b07c5201974234fcdcdf03b3 158 PANTHER PTHR30009:SF6 12 153 1.6E-35 T 22-04-2016 VCLMA_RS09445 c7768717b07c5201974234fcdcdf03b3 158 Pfam PF03918 Cytochrome C biogenesis protein 9 150 4.4E-56 T 22-04-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family VCLMA_RS02320 f1758178d6e95d4e5d2b4ac59eed5ea7 185 PANTHER PTHR33219:SF5 1 185 2.3E-87 T 22-04-2016 VCLMA_RS02320 f1758178d6e95d4e5d2b4ac59eed5ea7 185 Pfam PF02325 YGGT family 109 173 6.0E-20 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 VCLMA_RS02320 f1758178d6e95d4e5d2b4ac59eed5ea7 185 Pfam PF02325 YGGT family 9 77 9.3E-21 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 VCLMA_RS02320 f1758178d6e95d4e5d2b4ac59eed5ea7 185 PANTHER PTHR33219 1 185 2.3E-87 T 22-04-2016 VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 PANTHER PTHR19384:SF73 1 119 2.3E-91 T 22-04-2016 VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 PANTHER PTHR19384:SF73 141 167 2.3E-91 T 22-04-2016 VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 Pfam PF00258 Flavodoxin 5 160 1.2E-25 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 Gene3D G3DSA:3.40.50.360 1 167 1.6E-57 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 PANTHER PTHR19384 1 119 2.3E-91 T 22-04-2016 VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 PANTHER PTHR19384 141 167 2.3E-91 T 22-04-2016 VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 TIGRFAM TIGR01752 flav_long: flavodoxin 2 167 5.4E-67 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 PIRSF PIRSF038996 1 171 1.4E-56 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 VCLMA_RS11205 22be9dc64b697718806e7e9bf2ec4bec 172 SUPERFAMILY SSF52218 1 168 2.1E-48 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 SMART SM00382 157 301 4.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 4.3E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 SUPERFAMILY SSF46689 349 392 3.37E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 SUPERFAMILY SSF46689 434 486 3.37E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 PANTHER PTHR32071 1 387 7.1E-262 T 22-04-2016 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 PANTHER PTHR32071 420 488 7.1E-262 T 22-04-2016 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 PANTHER PTHR32071:SF36 1 387 7.1E-262 T 22-04-2016 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 PANTHER PTHR32071:SF36 420 488 7.1E-262 T 22-04-2016 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 1.8E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 1.8E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 SUPERFAMILY SSF52540 137 378 3.52E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 Pfam PF00158 Sigma-54 interaction domain 137 304 4.1E-73 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 Gene3D G3DSA:1.10.10.60 432 486 4.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 SUPERFAMILY SSF52172 6 182 5.42E-6 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 115 4.5E-30 T 22-04-2016 IPR010518 Flagellar regulatory FleQ VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 Gene3D G3DSA:1.10.8.60 310 384 2.5E-20 T 22-04-2016 VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VCLMA_RS09855 7f9c08ad69625fd96645d9669ac959e2 488 Gene3D G3DSA:3.40.50.300 134 309 3.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 SUPERFAMILY SSF57783 66 101 4.59E-13 T 22-04-2016 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 PANTHER PTHR11390:SF26 4 188 2.1E-108 T 22-04-2016 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 SUPERFAMILY SSF57783 16 64 1.7E-14 T 22-04-2016 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 Gene3D G3DSA:3.30.65.10 109 145 3.6E-7 T 22-04-2016 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 Gene3D G3DSA:3.30.65.10 67 101 4.9E-14 T 22-04-2016 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 Gene3D G3DSA:3.30.65.10 17 60 1.1E-14 T 22-04-2016 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 PANTHER PTHR11390 4 188 2.1E-108 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 22 57 9.3E-15 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 154 179 1.0 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 113 150 3.7E-14 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 67 102 4.8E-16 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 VCLMA_RS00245 6fd7428fe9e444fd97c1b1f09de81a51 188 SUPERFAMILY SSF57783 109 145 2.21E-5 T 22-04-2016 VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 SMART SM00271 1 66 2.6E-9 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 PANTHER PTHR14021:SF15 1 169 3.4E-57 T 22-04-2016 VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 SUPERFAMILY SSF47144 78 170 3.4E-25 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 26.088 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 2.8E-19 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 Gene3D G3DSA:1.20.1280.20 81 170 1.5E-30 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 Gene3D G3DSA:1.10.287.110 1 73 3.6E-26 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 PANTHER PTHR14021 1 169 3.4E-57 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 Pfam PF00226 DnaJ domain 3 70 1.6E-6 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 SUPERFAMILY SSF46565 1 74 3.4E-17 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS03645 9da6beb4c3369124d62370081c110ea3 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 1.7E-42 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 PANTHER PTHR30146:SF4 1 334 1.3E-153 T 22-04-2016 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 Gene3D G3DSA:3.40.50.2300 168 330 6.2E-66 T 22-04-2016 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 PANTHER PTHR30146 1 334 1.3E-153 T 22-04-2016 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 Gene3D G3DSA:1.10.260.40 1 57 2.6E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.1E-43 T 22-04-2016 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.4E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 Gene3D G3DSA:3.40.50.2300 58 167 4.1E-34 T 22-04-2016 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 SUPERFAMILY SSF53822 60 332 2.94E-91 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 SUPERFAMILY SSF47413 1 59 2.16E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS12465 e893956987020d5596739a364d7bd125 335 SMART SM00354 1 71 4.8E-33 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS10595 e514a44276bf7d897c570ecdd2be59f5 301 PANTHER PTHR21621:SF0 1 298 9.9E-133 T 22-04-2016 VCLMA_RS10595 e514a44276bf7d897c570ecdd2be59f5 301 SUPERFAMILY SSF56059 98 288 2.6E-49 T 22-04-2016 VCLMA_RS10595 e514a44276bf7d897c570ecdd2be59f5 301 PANTHER PTHR21621 1 298 9.9E-133 T 22-04-2016 VCLMA_RS10595 e514a44276bf7d897c570ecdd2be59f5 301 Gene3D G3DSA:3.40.50.20 5 102 5.8E-19 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS10595 e514a44276bf7d897c570ecdd2be59f5 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 2.5E-68 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type VCLMA_RS10595 e514a44276bf7d897c570ecdd2be59f5 301 Gene3D G3DSA:3.30.470.20 173 276 2.6E-36 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS10595 e514a44276bf7d897c570ecdd2be59f5 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.9E-87 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 VCLMA_RS10595 e514a44276bf7d897c570ecdd2be59f5 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.959 T 22-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VCLMA_RS10595 e514a44276bf7d897c570ecdd2be59f5 301 Gene3D G3DSA:3.30.1490.20 103 172 5.8E-7 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS10665 8a283a8d0311310102a30def75628c46 106 Pfam PF01722 BolA-like protein 10 83 9.9E-32 T 22-04-2016 IPR002634 BolA protein VCLMA_RS10665 8a283a8d0311310102a30def75628c46 106 Gene3D G3DSA:3.30.300.90 1 101 2.7E-34 T 22-04-2016 IPR002634 BolA protein VCLMA_RS10665 8a283a8d0311310102a30def75628c46 106 PIRSF PIRSF003113 1 99 1.5E-39 T 22-04-2016 IPR002634 BolA protein VCLMA_RS10665 8a283a8d0311310102a30def75628c46 106 SUPERFAMILY SSF82657 1 89 2.09E-32 T 22-04-2016 IPR002634 BolA protein VCLMA_RS10665 8a283a8d0311310102a30def75628c46 106 PANTHER PTHR12735:SF23 1 103 8.5E-66 T 22-04-2016 VCLMA_RS10665 8a283a8d0311310102a30def75628c46 106 PANTHER PTHR12735 1 103 8.5E-66 T 22-04-2016 VCLMA_RS01655 cd9745861428988e2102ae198e7eea5a 295 PANTHER PTHR22911:SF64 1 294 1.5E-113 T 22-04-2016 VCLMA_RS01655 cd9745861428988e2102ae198e7eea5a 295 SUPERFAMILY SSF103481 214 294 3.27E-9 T 22-04-2016 VCLMA_RS01655 cd9745861428988e2102ae198e7eea5a 295 SUPERFAMILY SSF103481 36 140 1.16E-11 T 22-04-2016 VCLMA_RS01655 cd9745861428988e2102ae198e7eea5a 295 PANTHER PTHR22911 1 294 1.5E-113 T 22-04-2016 VCLMA_RS01655 cd9745861428988e2102ae198e7eea5a 295 Pfam PF00892 EamA-like transporter family 4 135 2.0E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS01655 cd9745861428988e2102ae198e7eea5a 295 Pfam PF00892 EamA-like transporter family 157 294 5.9E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS03405 ca098469f21c014e0121a057644b5693 103 Pfam PF01371 Trp repressor protein 9 94 1.1E-33 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VCLMA_RS03405 ca098469f21c014e0121a057644b5693 103 Gene3D G3DSA:1.10.1270.10 1 96 1.3E-39 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VCLMA_RS03405 ca098469f21c014e0121a057644b5693 103 TIGRFAM TIGR01321 TrpR: trp operon repressor 7 89 1.1E-27 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VCLMA_RS03405 ca098469f21c014e0121a057644b5693 103 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 9 82 2.0E-34 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VCLMA_RS03405 ca098469f21c014e0121a057644b5693 103 PANTHER PTHR38025 1 100 1.6E-44 T 22-04-2016 VCLMA_RS03405 ca098469f21c014e0121a057644b5693 103 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 24.174 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VCLMA_RS03405 ca098469f21c014e0121a057644b5693 103 SUPERFAMILY SSF48295 2 95 4.03E-30 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 VCLMA_RS03405 ca098469f21c014e0121a057644b5693 103 PIRSF PIRSF003196 1 99 3.6E-41 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 VCLMA_RS03405 ca098469f21c014e0121a057644b5693 103 PANTHER PTHR38025:SF1 1 100 1.6E-44 T 22-04-2016 VCLMA_RS09825 c0c65bb1e26308699cbe7d8a83308b9a 266 PRINTS PR01003 Flagellar assembly protein FliH signature 127 146 7.3E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VCLMA_RS09825 c0c65bb1e26308699cbe7d8a83308b9a 266 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 7.3E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VCLMA_RS09825 c0c65bb1e26308699cbe7d8a83308b9a 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 7.3E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VCLMA_RS09825 c0c65bb1e26308699cbe7d8a83308b9a 266 PRINTS PR01003 Flagellar assembly protein FliH signature 108 126 7.3E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VCLMA_RS09825 c0c65bb1e26308699cbe7d8a83308b9a 266 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 7.3E-9 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VCLMA_RS09825 c0c65bb1e26308699cbe7d8a83308b9a 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 1.8E-34 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VCLMA_RS09825 c0c65bb1e26308699cbe7d8a83308b9a 266 PANTHER PTHR34982 1 266 1.8E-102 T 22-04-2016 VCLMA_RS09825 c0c65bb1e26308699cbe7d8a83308b9a 266 PANTHER PTHR34982:SF1 1 266 1.8E-102 T 22-04-2016 VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 SMART SM00382 385 568 6.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 Gene3D G3DSA:3.40.50.300 360 594 6.1E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 PANTHER PTHR24221 6 60 0.0 T 22-04-2016 VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 PANTHER PTHR24221 78 592 0.0 T 22-04-2016 VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 SUPERFAMILY SSF90123 12 345 6.41E-56 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 Gene3D G3DSA:1.20.1560.10 12 341 1.8E-53 T 22-04-2016 VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 Pfam PF00664 ABC transporter transmembrane region 26 312 4.8E-30 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 SUPERFAMILY SSF52540 354 592 1.25E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 PANTHER PTHR24221:SF233 6 60 0.0 T 22-04-2016 VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 PANTHER PTHR24221:SF233 78 592 0.0 T 22-04-2016 VCLMA_RS06950 7b752673144406e2181ef12ad3c9dc62 598 Pfam PF00005 ABC transporter 376 524 6.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 PANTHER PTHR32092:SF5 3 439 2.6E-255 T 22-04-2016 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 Gene3D G3DSA:3.90.110.10 171 435 1.4E-99 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.1E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 PANTHER PTHR32092 3 439 2.6E-255 T 22-04-2016 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 2.0E-49 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 Gene3D G3DSA:3.40.50.720 5 170 2.4E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 SUPERFAMILY SSF51735 6 170 1.6E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 4.2E-61 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VCLMA_RS06060 2c6e9675cc32341fc08b9a5810448f0d 440 SUPERFAMILY SSF56327 173 436 1.79E-90 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VCLMA_RS12745 a043372b4bdb8a9b2c01081e0c60a1d5 125 PIRSF PIRSF016821 5 125 1.3E-42 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VCLMA_RS12745 a043372b4bdb8a9b2c01081e0c60a1d5 125 PANTHER PTHR11079 1 101 9.8E-33 T 22-04-2016 VCLMA_RS12745 a043372b4bdb8a9b2c01081e0c60a1d5 125 PANTHER PTHR11079:SF70 1 101 9.8E-33 T 22-04-2016 VCLMA_RS12745 a043372b4bdb8a9b2c01081e0c60a1d5 125 SMART SM00363 8 71 1.2E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS12745 a043372b4bdb8a9b2c01081e0c60a1d5 125 SUPERFAMILY SSF55174 6 104 8.77E-33 T 22-04-2016 VCLMA_RS12745 a043372b4bdb8a9b2c01081e0c60a1d5 125 Pfam PF01479 S4 domain 8 54 7.9E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS12745 a043372b4bdb8a9b2c01081e0c60a1d5 125 Gene3D G3DSA:3.10.290.10 5 102 1.7E-40 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS06015 e1d291b9f11ff2815fd5b9fc0784e6d7 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 1.2E-105 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VCLMA_RS06015 e1d291b9f11ff2815fd5b9fc0784e6d7 427 PIRSF PIRSF006066 1 426 1.4E-72 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 VCLMA_RS06015 e1d291b9f11ff2815fd5b9fc0784e6d7 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 4.2E-98 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VCLMA_RS06015 e1d291b9f11ff2815fd5b9fc0784e6d7 427 PANTHER PTHR33362 1 424 2.3E-255 T 22-04-2016 VCLMA_RS06015 e1d291b9f11ff2815fd5b9fc0784e6d7 427 PANTHER PTHR33362:SF7 1 424 2.3E-255 T 22-04-2016 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 462 1.0E-193 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 464 33.725 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 PANTHER PTHR11451 3 318 5.2E-103 T 22-04-2016 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 Gene3D G3DSA:1.10.1160.10 236 316 6.7E-36 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 Gene3D G3DSA:1.10.10.350 366 464 2.4E-31 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 SUPERFAMILY SSF48163 302 464 3.79E-47 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 Gene3D G3DSA:3.40.50.620 184 233 1.3E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 Gene3D G3DSA:3.40.50.620 2 67 1.3E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 5.5E-116 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 Gene3D G3DSA:3.90.800.10 68 183 2.1E-37 T 22-04-2016 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 3.3E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 3.3E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 3.3E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 3.3E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 3.3E-27 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 SUPERFAMILY SSF52374 3 301 8.04E-109 T 22-04-2016 VCLMA_RS10280 4bb3cce6456d929add96fc10f5482e7c 474 PANTHER PTHR11451:SF41 3 318 5.2E-103 T 22-04-2016 VCLMA_RS16650 d4464a4e6884136b1ee26bfcaa919dee 173 Gene3D G3DSA:1.10.530.10 2 44 1.5E-15 T 22-04-2016 VCLMA_RS16650 d4464a4e6884136b1ee26bfcaa919dee 173 Gene3D G3DSA:1.10.530.10 139 170 1.5E-15 T 22-04-2016 VCLMA_RS16650 d4464a4e6884136b1ee26bfcaa919dee 173 PANTHER PTHR22595:SF49 1 173 1.8E-96 T 22-04-2016 VCLMA_RS16650 d4464a4e6884136b1ee26bfcaa919dee 173 Pfam PF00182 Chitinase class I 3 173 8.1E-19 T 22-04-2016 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VCLMA_RS16650 d4464a4e6884136b1ee26bfcaa919dee 173 PANTHER PTHR22595 1 173 1.8E-96 T 22-04-2016 VCLMA_RS16650 d4464a4e6884136b1ee26bfcaa919dee 173 SUPERFAMILY SSF53955 2 173 1.01E-36 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS16650 d4464a4e6884136b1ee26bfcaa919dee 173 Gene3D G3DSA:3.30.20.10 81 138 1.1E-22 T 22-04-2016 VCLMA_RS05195 425da2505809b9456f372c2610b6e0cb 323 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS05195 425da2505809b9456f372c2610b6e0cb 323 Pfam PF01207 Dihydrouridine synthase (Dus) 5 290 1.4E-75 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS05195 425da2505809b9456f372c2610b6e0cb 323 Gene3D G3DSA:3.20.20.70 2 241 4.7E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS05195 425da2505809b9456f372c2610b6e0cb 323 PIRSF PIRSF006621 1 321 6.5E-75 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS05195 425da2505809b9456f372c2610b6e0cb 323 SUPERFAMILY SSF51395 1 313 1.67E-73 T 22-04-2016 VCLMA_RS05195 425da2505809b9456f372c2610b6e0cb 323 PANTHER PTHR11082 1 314 5.9E-208 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS05195 425da2505809b9456f372c2610b6e0cb 323 PANTHER PTHR11082:SF26 1 314 5.9E-208 T 22-04-2016 VCLMA_RS05195 425da2505809b9456f372c2610b6e0cb 323 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 53.208 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VCLMA_RS06155 e0e16b1740e9c0e3820597f44929e617 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 1.1E-63 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VCLMA_RS06155 e0e16b1740e9c0e3820597f44929e617 505 PANTHER PTHR30389:SF1 1 502 0.0 T 22-04-2016 VCLMA_RS06155 e0e16b1740e9c0e3820597f44929e617 505 PIRSF PIRSF001394 1 505 1.6E-216 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS06155 e0e16b1740e9c0e3820597f44929e617 505 SUPERFAMILY SSF117457 316 489 2.48E-64 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VCLMA_RS06155 e0e16b1740e9c0e3820597f44929e617 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 488 2.9E-51 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VCLMA_RS06155 e0e16b1740e9c0e3820597f44929e617 505 Pfam PF05683 Fumarase C-terminus 289 490 1.6E-84 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VCLMA_RS06155 e0e16b1740e9c0e3820597f44929e617 505 PANTHER PTHR30389 1 502 0.0 T 22-04-2016 VCLMA_RS06155 e0e16b1740e9c0e3820597f44929e617 505 Gene3D G3DSA:3.20.130.10 302 490 4.8E-75 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VCLMA_RS06155 e0e16b1740e9c0e3820597f44929e617 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 9.3E-99 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VCLMA_RS08935 3766d14cc4aa1f13d30ade859beb9dc0 282 SUPERFAMILY SSF51197 9 263 1.92E-62 T 22-04-2016 VCLMA_RS08935 3766d14cc4aa1f13d30ade859beb9dc0 282 Gene3D G3DSA:3.60.130.10 2 264 5.9E-55 T 22-04-2016 VCLMA_RS08935 3766d14cc4aa1f13d30ade859beb9dc0 282 PANTHER PTHR10696:SF26 22 264 1.2E-155 T 22-04-2016 VCLMA_RS08935 3766d14cc4aa1f13d30ade859beb9dc0 282 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 25 261 3.0E-44 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 VCLMA_RS08935 3766d14cc4aa1f13d30ade859beb9dc0 282 PANTHER PTHR10696 22 264 1.2E-155 T 22-04-2016 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 Gene3D G3DSA:3.40.50.1000 3 152 8.5E-41 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 Gene3D G3DSA:3.30.230.40 259 357 4.2E-32 T 22-04-2016 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 Gene3D G3DSA:3.30.230.40 169 255 2.6E-39 T 22-04-2016 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 PANTHER PTHR23133 12 99 4.2E-180 T 22-04-2016 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 PANTHER PTHR23133 165 357 4.2E-180 T 22-04-2016 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 3.4E-46 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 SUPERFAMILY SSF54211 254 344 1.26E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 38.179 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 128 1.7E-5 T 22-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 55.87 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 SUPERFAMILY SSF54211 169 253 2.4E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 4.7E-79 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 7.4E-28 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 PANTHER PTHR23133:SF2 12 99 4.2E-180 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 PANTHER PTHR23133:SF2 165 357 4.2E-180 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 SUPERFAMILY SSF56784 3 157 2.89E-38 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 1.8E-66 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VCLMA_RS05340 754e1ef999fa7892fd6f9ff6fa580e05 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 VCLMA_RS12820 ed4ab744f66ae24b537546e9c30395fe 334 Gene3D G3DSA:3.20.20.140 3 329 2.1E-97 T 22-04-2016 VCLMA_RS12820 ed4ab744f66ae24b537546e9c30395fe 334 SUPERFAMILY SSF51556 4 327 2.4E-76 T 22-04-2016 IPR032466 Metal-dependent hydrolase VCLMA_RS12820 ed4ab744f66ae24b537546e9c30395fe 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.657 T 22-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VCLMA_RS12820 ed4ab744f66ae24b537546e9c30395fe 334 Pfam PF00962 Adenosine/AMP deaminase 6 327 1.7E-88 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 VCLMA_RS12820 ed4ab744f66ae24b537546e9c30395fe 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 329 1.0E-125 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 VCLMA_RS12820 ed4ab744f66ae24b537546e9c30395fe 334 PANTHER PTHR11409 2 329 2.2E-106 T 22-04-2016 VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 Pfam PF13522 Glutamine amidotransferase domain 64 199 2.3E-17 T 22-04-2016 VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 Gene3D G3DSA:3.40.50.2020 270 443 6.2E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 PANTHER PTHR11907 1 477 1.7E-256 T 22-04-2016 VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 1.8E-165 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 SUPERFAMILY SSF53271 249 482 4.59E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 Gene3D G3DSA:3.60.20.10 2 257 5.4E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 SUPERFAMILY SSF56235 2 256 6.52E-71 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 PIRSF PIRSF000485 1 480 9.0E-169 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 PANTHER PTHR11907:SF0 1 477 1.7E-256 T 22-04-2016 VCLMA_RS04700 06c5663d84b58f2ba2a9dde497451112 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 465 44.443 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 VCLMA_RS07130 48f7b1078b897666297a726dd8dbd53e 288 Gene3D G3DSA:3.90.1200.10 100 248 1.5E-9 T 22-04-2016 VCLMA_RS07130 48f7b1078b897666297a726dd8dbd53e 288 Gene3D G3DSA:3.30.200.20 8 91 8.7E-4 T 22-04-2016 VCLMA_RS07130 48f7b1078b897666297a726dd8dbd53e 288 PIRSF PIRSF006221 1 288 3.9E-109 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VCLMA_RS07130 48f7b1078b897666297a726dd8dbd53e 288 PANTHER PTHR12149:SF8 1 286 2.2E-121 T 22-04-2016 VCLMA_RS07130 48f7b1078b897666297a726dd8dbd53e 288 SUPERFAMILY SSF56112 5 282 3.28E-41 T 22-04-2016 IPR011009 Protein kinase-like domain VCLMA_RS07130 48f7b1078b897666297a726dd8dbd53e 288 Pfam PF03881 Fructosamine kinase 1 287 2.1E-124 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase VCLMA_RS07130 48f7b1078b897666297a726dd8dbd53e 288 PANTHER PTHR12149 1 286 2.2E-121 T 22-04-2016 VCLMA_RS07865 8f5f6d842b13a67fbf8f71bc0dd2c201 301 Gene3D G3DSA:3.90.1640.10 2 176 2.2E-54 T 22-04-2016 VCLMA_RS07865 8f5f6d842b13a67fbf8f71bc0dd2c201 301 PANTHER PTHR12112 1 301 4.7E-111 T 22-04-2016 VCLMA_RS07865 8f5f6d842b13a67fbf8f71bc0dd2c201 301 PANTHER PTHR12112:SF17 1 301 4.7E-111 T 22-04-2016 VCLMA_RS07865 8f5f6d842b13a67fbf8f71bc0dd2c201 301 SMART SM01131 178 300 1.1E-35 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VCLMA_RS07865 8f5f6d842b13a67fbf8f71bc0dd2c201 301 Pfam PF01368 DHH family 2 142 1.1E-20 T 22-04-2016 IPR001667 DDH domain VCLMA_RS07865 8f5f6d842b13a67fbf8f71bc0dd2c201 301 SUPERFAMILY SSF64182 1 298 1.28E-66 T 22-04-2016 VCLMA_RS07865 8f5f6d842b13a67fbf8f71bc0dd2c201 301 Pfam PF02833 DHHA2 domain 180 297 2.1E-16 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 7.2E-135 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 Gene3D G3DSA:3.20.20.70 7 244 3.8E-83 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 PANTHER PTHR11082 1 320 1.1E-153 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.88 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 SUPERFAMILY SSF51395 10 319 1.15E-90 T 22-04-2016 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 PANTHER PTHR11082:SF25 1 320 1.1E-153 T 22-04-2016 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 Gene3D G3DSA:1.10.1200.80 252 320 2.0E-20 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 PIRSF PIRSF006621 1 321 5.8E-103 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS01400 0d8bd4a2878b237bf2f2edf6e8588dc2 322 Pfam PF01207 Dihydrouridine synthase (Dus) 13 314 8.5E-112 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 PANTHER PTHR31637:SF0 4 508 1.8E-290 T 22-04-2016 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 3.6E-229 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 SUPERFAMILY SSF64158 78 308 3.27E-82 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 PANTHER PTHR31637 4 508 1.8E-290 T 22-04-2016 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 Pfam PF01676 Metalloenzyme superfamily 5 495 4.3E-83 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 Gene3D G3DSA:3.40.720.10 5 78 3.7E-90 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 Gene3D G3DSA:3.40.720.10 313 508 3.7E-90 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.659 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 SUPERFAMILY SSF53649 309 509 1.01E-78 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 SUPERFAMILY SSF53649 5 78 1.01E-78 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 PIRSF PIRSF001492 1 510 1.5E-204 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 1.3E-80 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS01650 ec5c1da1282521ce62113cbddd21b734 510 Gene3D G3DSA:3.40.1450.10 79 308 3.7E-95 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS06470 e5e6ab241ea03ee38ed4a7539c00918b 443 PANTHER PTHR10799:SF750 303 429 5.0E-61 T 22-04-2016 VCLMA_RS06470 e5e6ab241ea03ee38ed4a7539c00918b 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 272 426 7.1E-48 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06470 e5e6ab241ea03ee38ed4a7539c00918b 443 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 268 430 1.6E-46 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06470 e5e6ab241ea03ee38ed4a7539c00918b 443 SUPERFAMILY SSF55073 275 432 6.98E-48 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS06470 e5e6ab241ea03ee38ed4a7539c00918b 443 SMART SM00267 259 431 4.4E-56 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06470 e5e6ab241ea03ee38ed4a7539c00918b 443 PANTHER PTHR10799 303 429 5.0E-61 T 22-04-2016 VCLMA_RS06470 e5e6ab241ea03ee38ed4a7539c00918b 443 Gene3D G3DSA:3.30.70.270 272 435 1.6E-54 T 22-04-2016 VCLMA_RS12380 b670e2899f5c62058edfd6317092af93 120 Pfam PF02313 Fumarate reductase subunit D 6 118 1.3E-45 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VCLMA_RS12380 b670e2899f5c62058edfd6317092af93 120 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 5 116 2.0E-59 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VCLMA_RS12380 b670e2899f5c62058edfd6317092af93 120 PIRSF PIRSF000179 1 120 2.6E-57 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VCLMA_RS12380 b670e2899f5c62058edfd6317092af93 120 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 120 24.793 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 VCLMA_RS12380 b670e2899f5c62058edfd6317092af93 120 Gene3D G3DSA:1.20.1300.10 2 120 1.6E-53 T 22-04-2016 VCLMA_RS12380 b670e2899f5c62058edfd6317092af93 120 SUPERFAMILY SSF81343 2 120 2.4E-50 T 22-04-2016 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 Pfam PF01590 GAF domain 20 151 7.8E-14 T 22-04-2016 IPR003018 GAF domain GO:0005515 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 Gene3D G3DSA:3.20.20.60 422 737 3.3E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 Gene3D G3DSA:3.50.30.10 302 418 1.5E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 7.6E-22 T 22-04-2016 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 7.6E-22 T 22-04-2016 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 7.6E-22 T 22-04-2016 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 7.6E-22 T 22-04-2016 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 PANTHER PTHR22931 181 715 0.0 T 22-04-2016 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 728 1.5E-133 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 SUPERFAMILY SSF52009 293 413 1.02E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 Gene3D G3DSA:3.30.450.40 1 166 9.9E-46 T 22-04-2016 IPR029016 GAF domain-like VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 SUPERFAMILY SSF47831 202 311 9.29E-27 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 2.1E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 SMART SM00065 17 163 2.7E-21 T 22-04-2016 IPR003018 GAF domain GO:0005515 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 SUPERFAMILY SSF55781 2 158 6.32E-32 T 22-04-2016 IPR029016 GAF domain-like VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 3.5E-16 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 424 706 1.4E-92 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 Gene3D G3DSA:1.10.274.10 200 301 1.5E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 PANTHER PTHR22931:SF23 181 715 0.0 T 22-04-2016 VCLMA_RS03275 6f8af3938f00770fa8e64a41ee38c97b 748 SUPERFAMILY SSF51621 419 714 9.68E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS01790 e90163023567a2314b430bab9cc2ace5 118 SUPERFAMILY SSF75169 2 118 1.23E-37 T 22-04-2016 IPR027396 DsrEFH-like VCLMA_RS01790 e90163023567a2314b430bab9cc2ace5 118 PANTHER PTHR38780:SF1 1 118 1.8E-58 T 22-04-2016 VCLMA_RS01790 e90163023567a2314b430bab9cc2ace5 118 Gene3D G3DSA:3.40.1260.10 2 118 3.9E-46 T 22-04-2016 IPR027396 DsrEFH-like VCLMA_RS01790 e90163023567a2314b430bab9cc2ace5 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 2.0E-47 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF VCLMA_RS01790 e90163023567a2314b430bab9cc2ace5 118 PANTHER PTHR38780 1 118 1.8E-58 T 22-04-2016 VCLMA_RS01790 e90163023567a2314b430bab9cc2ace5 118 Pfam PF02635 DsrE/DsrF-like family 3 118 8.2E-27 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 Gene3D G3DSA:2.60.420.10 723 784 7.7E-9 T 22-04-2016 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 PANTHER PTHR37469:SF1 419 801 0.0 T 22-04-2016 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 PANTHER PTHR37469:SF1 1 393 0.0 T 22-04-2016 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 727 6.8E-212 T 22-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 PANTHER PTHR37469 419 801 0.0 T 22-04-2016 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 PANTHER PTHR37469 1 393 0.0 T 22-04-2016 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 SUPERFAMILY SSF48208 273 800 1.49E-109 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 Gene3D G3DSA:2.70.98.40 1 325 7.9E-102 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 Gene3D G3DSA:1.50.10.10 511 614 4.8E-4 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 SUPERFAMILY SSF74650 1 269 7.53E-80 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 Pfam PF06165 Glycosyltransferase family 36 21 267 2.6E-84 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 VCLMA_RS02975 b58b07ac7205d2c079fcd74f09eb58b9 801 SMART SM01068 1 63 9.9E-19 T 22-04-2016 IPR009342 Putative carbohydrate binding domain VCLMA_RS02160 bb5b019c91c05030661e93362d29c93a 854 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 728 1.5E-211 T 22-04-2016 IPR011853 TRAP transporter, 4TM/12TM fusion protein VCLMA_RS02160 bb5b019c91c05030661e93362d29c93a 854 PANTHER PTHR33362 1 351 0.0 T 22-04-2016 VCLMA_RS02160 bb5b019c91c05030661e93362d29c93a 854 PANTHER PTHR33362 426 751 0.0 T 22-04-2016 VCLMA_RS02160 bb5b019c91c05030661e93362d29c93a 854 Pfam PF11874 Domain of unknown function (DUF3394) 673 852 1.7E-68 T 22-04-2016 IPR021814 Protein of unknown function DUF3394 VCLMA_RS02160 bb5b019c91c05030661e93362d29c93a 854 PANTHER PTHR33362:SF1 1 351 0.0 T 22-04-2016 VCLMA_RS02160 bb5b019c91c05030661e93362d29c93a 854 PANTHER PTHR33362:SF1 426 751 0.0 T 22-04-2016 VCLMA_RS02160 bb5b019c91c05030661e93362d29c93a 854 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 409 666 9.3E-29 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VCLMA_RS02160 bb5b019c91c05030661e93362d29c93a 854 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 400 2.0E-50 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VCLMA_RS10515 0664f5c376e57154338e6b4706d16a38 172 SUPERFAMILY SSF101307 8 160 5.62E-48 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VCLMA_RS10515 0664f5c376e57154338e6b4706d16a38 172 PIRSF PIRSF006162 4 167 1.9E-54 T 22-04-2016 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VCLMA_RS10515 0664f5c376e57154338e6b4706d16a38 172 PANTHER PTHR36305 1 166 4.5E-73 T 22-04-2016 VCLMA_RS10515 0664f5c376e57154338e6b4706d16a38 172 Pfam PF04608 Phosphatidylglycerophosphatase A 15 160 5.6E-52 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VCLMA_RS10210 010caa95f428d7d7b7d0b9288c82d2a9 131 PANTHER PTHR30435 2 131 1.7E-44 T 22-04-2016 VCLMA_RS10210 010caa95f428d7d7b7d0b9288c82d2a9 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 128 7.8E-29 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VCLMA_RS10210 010caa95f428d7d7b7d0b9288c82d2a9 131 PANTHER PTHR30435:SF12 2 131 1.7E-44 T 22-04-2016 VCLMA_RS10210 010caa95f428d7d7b7d0b9288c82d2a9 131 PIRSF PIRSF002889 1 131 1.5E-33 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VCLMA_RS01015 374f0b4c67b36b118463e7eb55fefe24 205 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 3.1E-70 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS01015 374f0b4c67b36b118463e7eb55fefe24 205 PANTHER PTHR19278 1 205 4.2E-140 T 22-04-2016 VCLMA_RS01015 374f0b4c67b36b118463e7eb55fefe24 205 Pfam PF00156 Phosphoribosyl transferase domain 43 161 4.5E-13 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VCLMA_RS01015 374f0b4c67b36b118463e7eb55fefe24 205 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 205 34.652 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS01015 374f0b4c67b36b118463e7eb55fefe24 205 SUPERFAMILY SSF53271 2 199 9.37E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS01015 374f0b4c67b36b118463e7eb55fefe24 205 Gene3D G3DSA:3.40.50.2020 7 205 4.1E-81 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS01015 374f0b4c67b36b118463e7eb55fefe24 205 PANTHER PTHR19278:SF36 1 205 4.2E-140 T 22-04-2016 VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 Gene3D G3DSA:1.10.579.10 275 467 1.4E-49 T 22-04-2016 VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 Pfam PF00875 DNA photolyase 6 131 8.3E-20 T 22-04-2016 IPR006050 DNA photolyase, N-terminal VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 Gene3D G3DSA:1.25.40.80 145 274 2.0E-20 T 22-04-2016 VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 PANTHER PTHR11455 3 482 0.0 T 22-04-2016 VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 PRINTS PR00147 DNA photolyase signature 336 354 2.1E-5 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 PRINTS PR00147 DNA photolyase signature 316 332 2.1E-5 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 SUPERFAMILY SSF52425 3 194 5.36E-40 T 22-04-2016 IPR006050 DNA photolyase, N-terminal VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 316 328 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 PANTHER PTHR11455:SF21 3 482 0.0 T 22-04-2016 VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 Pfam PF03441 FAD binding domain of DNA photolyase 266 463 5.3E-52 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 SUPERFAMILY SSF48173 191 468 7.06E-78 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain VCLMA_RS06565 60e361937a7967727e3604a5324cb6ef 485 Gene3D G3DSA:3.40.50.620 1 144 6.3E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 37 131 2.3E-24 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.9E-23 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.9E-23 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.9E-23 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.9E-23 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 Gene3D G3DSA:1.10.1060.10 5 147 1.0E-38 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 SUPERFAMILY SSF51971 143 407 7.65E-66 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 Gene3D G3DSA:3.40.50.720 411 481 3.5E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 Gene3D G3DSA:3.40.50.720 148 233 3.5E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 PANTHER PTHR11938:SF75 43 319 8.0E-152 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 PANTHER PTHR11938:SF75 335 473 8.0E-152 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 Gene3D G3DSA:3.50.50.60 234 407 3.7E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 SUPERFAMILY SSF46548 2 155 1.39E-36 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 1.0E-200 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 PANTHER PTHR11938 43 319 8.0E-152 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 PANTHER PTHR11938 335 473 8.0E-152 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 SUPERFAMILY SSF51971 389 479 2.59E-8 T 22-04-2016 VCLMA_RS11000 b771f90150808c9b76995c53951262b8 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 5.5E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 SMART SM00283 234 495 5.7E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 Pfam PF00672 HAMP domain 147 215 1.5E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 PANTHER PTHR32089 147 496 1.5E-143 T 22-04-2016 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 SUPERFAMILY SSF58104 187 495 3.27E-61 T 22-04-2016 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 Gene3D G3DSA:1.10.287.950 250 464 7.3E-49 T 22-04-2016 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 390 1.28E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 141 161 1.28E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 332 359 1.28E-18 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 SMART SM00304 165 219 2.5E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 PANTHER PTHR32089:SF55 147 496 1.5E-143 T 22-04-2016 VCLMA_RS09035 d5da4cb9f17ce9dcaf73ba1b21284cd4 496 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 307 494 2.8E-40 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS11450 7c5df5e2d165efcb158118597b0d9fd8 86 PANTHER PTHR12469:SF3 4 62 1.0E-29 T 22-04-2016 VCLMA_RS11450 7c5df5e2d165efcb158118597b0d9fd8 86 SUPERFAMILY SSF109910 3 79 1.14E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase VCLMA_RS11450 7c5df5e2d165efcb158118597b0d9fd8 86 Gene3D G3DSA:1.10.150.250 3 83 1.0E-29 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase VCLMA_RS11450 7c5df5e2d165efcb158118597b0d9fd8 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 5.5E-25 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase VCLMA_RS11450 7c5df5e2d165efcb158118597b0d9fd8 86 PANTHER PTHR12469 4 62 1.0E-29 T 22-04-2016 VCLMA_RS05110 a1335008830796fc1fc55a87615008d8 447 PANTHER PTHR32071 1 331 2.4E-137 T 22-04-2016 VCLMA_RS05110 a1335008830796fc1fc55a87615008d8 447 SUPERFAMILY SSF109604 211 379 4.4E-13 T 22-04-2016 VCLMA_RS05110 a1335008830796fc1fc55a87615008d8 447 Gene3D G3DSA:3.40.50.2300 11 144 4.0E-34 T 22-04-2016 VCLMA_RS05110 a1335008830796fc1fc55a87615008d8 447 SUPERFAMILY SSF52172 10 166 1.85E-33 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS05110 a1335008830796fc1fc55a87615008d8 447 SMART SM00448 11 122 1.9E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05110 a1335008830796fc1fc55a87615008d8 447 PANTHER PTHR32071:SF39 1 331 2.4E-137 T 22-04-2016 VCLMA_RS05110 a1335008830796fc1fc55a87615008d8 447 Pfam PF13487 HD domain 283 331 1.5E-12 T 22-04-2016 VCLMA_RS05110 a1335008830796fc1fc55a87615008d8 447 Pfam PF00072 Response regulator receiver domain 13 120 9.3E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06790 1ef901130177c949bc803544cc9219a4 206 Gene3D G3DSA:1.10.760.10 21 202 5.1E-35 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06790 1ef901130177c949bc803544cc9219a4 206 SUPERFAMILY SSF46626 21 202 1.17E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06790 1ef901130177c949bc803544cc9219a4 206 PANTHER PTHR10422 30 165 1.8E-92 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VCLMA_RS06790 1ef901130177c949bc803544cc9219a4 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 1.1E-82 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VCLMA_RS06790 1ef901130177c949bc803544cc9219a4 206 PANTHER PTHR10422:SF23 30 165 1.8E-92 T 22-04-2016 VCLMA_RS06790 1ef901130177c949bc803544cc9219a4 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 188 2.2E-82 T 22-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VCLMA_RS04155 3a222cb8df89e1085b8074ac61acd6a8 244 SUPERFAMILY SSF55120 2 238 4.96E-62 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04155 3a222cb8df89e1085b8074ac61acd6a8 244 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04155 3a222cb8df89e1085b8074ac61acd6a8 244 PANTHER PTHR11079 3 243 3.2E-89 T 22-04-2016 VCLMA_RS04155 3a222cb8df89e1085b8074ac61acd6a8 244 Pfam PF00849 RNA pseudouridylate synthase 11 170 4.7E-33 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04155 3a222cb8df89e1085b8074ac61acd6a8 244 PANTHER PTHR11079:SF60 3 243 3.2E-89 T 22-04-2016 VCLMA_RS11190 6ab0c8e4bdc26d36a7f75598f3ba4eda 579 PANTHER PTHR30255 1 578 1.1E-226 T 22-04-2016 VCLMA_RS11190 6ab0c8e4bdc26d36a7f75598f3ba4eda 579 Pfam PF02272 DHHA1 domain 380 449 2.6E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 VCLMA_RS11190 6ab0c8e4bdc26d36a7f75598f3ba4eda 579 PANTHER PTHR30255:SF2 1 578 1.1E-226 T 22-04-2016 VCLMA_RS11190 6ab0c8e4bdc26d36a7f75598f3ba4eda 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 20 574 6.9E-158 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VCLMA_RS11190 6ab0c8e4bdc26d36a7f75598f3ba4eda 579 Pfam PF01368 DHH family 71 206 5.8E-11 T 22-04-2016 IPR001667 DDH domain VCLMA_RS11190 6ab0c8e4bdc26d36a7f75598f3ba4eda 579 SUPERFAMILY SSF64182 45 463 1.83E-118 T 22-04-2016 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 SUPERFAMILY SSF58104 358 640 9.16E-42 T 22-04-2016 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 SMART SM00283 357 632 4.1E-13 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 SMART SM00283 71 346 1.3E-25 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 SUPERFAMILY SSF58104 56 342 3.92E-45 T 22-04-2016 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 PANTHER PTHR32089 586 641 1.7E-36 T 22-04-2016 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 PANTHER PTHR32089 45 264 1.7E-36 T 22-04-2016 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 133 317 1.6E-29 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 441 629 8.9E-27 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 Gene3D G3DSA:1.10.287.950 580 638 1.7E-33 T 22-04-2016 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 Gene3D G3DSA:1.10.287.950 87 305 6.4E-37 T 22-04-2016 VCLMA_RS06620 0586325da01937ee45977b5bcddbbe0d 641 Gene3D G3DSA:1.10.287.950 386 537 1.7E-33 T 22-04-2016 VCLMA_RS11550 de9a9d6aef41e051d2aeb2dc9489c4c1 200 PANTHER PTHR11670 1 200 3.6E-120 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11550 de9a9d6aef41e051d2aeb2dc9489c4c1 200 Gene3D G3DSA:3.20.19.10 1 194 3.0E-51 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VCLMA_RS11550 de9a9d6aef41e051d2aeb2dc9489c4c1 200 SUPERFAMILY SSF52016 1 196 1.63E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VCLMA_RS11550 de9a9d6aef41e051d2aeb2dc9489c4c1 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.991 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11550 de9a9d6aef41e051d2aeb2dc9489c4c1 200 Pfam PF00694 Aconitase C-terminal domain 1 125 8.4E-39 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11550 de9a9d6aef41e051d2aeb2dc9489c4c1 200 PANTHER PTHR11670:SF27 1 200 3.6E-120 T 22-04-2016 VCLMA_RS11550 de9a9d6aef41e051d2aeb2dc9489c4c1 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 7.0E-97 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 Gene3D G3DSA:3.10.610.10 45 158 2.8E-45 T 22-04-2016 VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 Pfam PF13633 Prokaryotic N-terminal methylation site 14 39 1.5E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 PANTHER PTHR39583 6 221 1.0E-64 T 22-04-2016 VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 SUPERFAMILY SSF54523 47 208 3.81E-54 T 22-04-2016 VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 14 34 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 Pfam PF11612 Type II secretion system (T2SS), protein J 66 203 1.1E-39 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 1.0E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 Gene3D G3DSA:2.10.70.20 160 208 1.8E-21 T 22-04-2016 VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 PANTHER PTHR39583:SF1 6 221 1.0E-64 T 22-04-2016 VCLMA_RS12705 fdc3a07a48db59143a43d135560783a9 221 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 14 206 4.5E-99 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VCLMA_RS11390 315433cf0b7e360c01dfe5460995a2e2 241 PANTHER PTHR33991 2 241 2.1E-69 T 22-04-2016 VCLMA_RS11390 315433cf0b7e360c01dfe5460995a2e2 241 SUPERFAMILY SSF57863 86 159 1.94E-13 T 22-04-2016 VCLMA_RS11390 315433cf0b7e360c01dfe5460995a2e2 241 SUPERFAMILY SSF50249 6 76 9.59E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS11390 315433cf0b7e360c01dfe5460995a2e2 241 Gene3D G3DSA:2.40.50.140 7 76 1.0E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS11390 315433cf0b7e360c01dfe5460995a2e2 241 Pfam PF02565 Recombination protein O C terminal 85 226 9.1E-25 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VCLMA_RS11390 315433cf0b7e360c01dfe5460995a2e2 241 Hamap MF_00201 DNA repair protein RecO [recO]. 2 231 23.4 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VCLMA_RS11390 315433cf0b7e360c01dfe5460995a2e2 241 Pfam PF11967 Recombination protein O N terminal 5 77 2.3E-24 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal VCLMA_RS11390 315433cf0b7e360c01dfe5460995a2e2 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 230 1.8E-43 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VCLMA_RS07215 c88f5a421bcdd881323907727aa14ca6 156 PANTHER PTHR34986:SF1 2 156 1.1E-74 T 22-04-2016 VCLMA_RS07215 c88f5a421bcdd881323907727aa14ca6 156 Pfam PF04074 Domain of unknown function (DUF386) 1 150 3.5E-38 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family VCLMA_RS07215 c88f5a421bcdd881323907727aa14ca6 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 151 1.2E-39 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family VCLMA_RS07215 c88f5a421bcdd881323907727aa14ca6 156 Gene3D G3DSA:2.60.120.370 1 152 2.6E-43 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family VCLMA_RS07215 c88f5a421bcdd881323907727aa14ca6 156 SUPERFAMILY SSF51197 1 152 2.14E-39 T 22-04-2016 VCLMA_RS07215 c88f5a421bcdd881323907727aa14ca6 156 PANTHER PTHR34986 2 156 1.1E-74 T 22-04-2016 VCLMA_RS06880 8cd98b31d9d6312e9f61586c47de9d72 57 Gene3D G3DSA:1.10.10.620 1 56 7.0E-28 T 22-04-2016 IPR023200 Ribosome modulation factor-like domain VCLMA_RS06880 8cd98b31d9d6312e9f61586c47de9d72 57 Pfam PF04957 Ribosome modulation factor 1 54 1.5E-28 T 22-04-2016 IPR007040 Ribosome modulation factor VCLMA_RS06880 8cd98b31d9d6312e9f61586c47de9d72 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.355 T 22-04-2016 IPR007040 Ribosome modulation factor VCLMA_RS06880 8cd98b31d9d6312e9f61586c47de9d72 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 3.0E-24 T 22-04-2016 IPR007040 Ribosome modulation factor VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 445 531 6.6E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 275 357 6.3E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 358 443 7.5E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 429 539 4.33E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 190 277 2.09E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 21 100 1.0E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 192 274 1.5E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 4 112 1.97E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 190 260 1.2E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 449 520 5.5E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 103 171 7.8E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 362 434 1.3E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 275 347 8.3E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SMART SM00316 19 87 0.004 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PIRSF PIRSF002111 1 534 6.7E-218 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Gene3D G3DSA:2.40.50.140 101 172 2.6E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 255 360 5.5E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PANTHER PTHR10724:SF6 1 514 2.7E-276 T 22-04-2016 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 362 434 3.7E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 18 86 1.5E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 449 520 1.8E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 104 171 1.4E-7 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 275 347 7.7E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 Pfam PF00575 S1 RNA binding domain 189 260 1.8E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 7.1E-230 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 347 440 2.69E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 SUPERFAMILY SSF50249 88 174 6.94E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 6.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 6.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 6.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 6.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 6.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 6.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 6.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 6.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 6.4E-97 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VCLMA_RS08795 baaa88c874787b288b6fe544610571e1 556 PANTHER PTHR10724 1 514 2.7E-276 T 22-04-2016 VCLMA_RS08915 042e481b1edd97667b34e7629a7fd7d8 220 Gene3D G3DSA:1.20.1440.100 17 82 3.5E-17 T 22-04-2016 VCLMA_RS08915 042e481b1edd97667b34e7629a7fd7d8 220 Gene3D G3DSA:3.40.50.1000 83 219 2.6E-44 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS08915 042e481b1edd97667b34e7629a7fd7d8 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 2.7E-72 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial VCLMA_RS08915 042e481b1edd97667b34e7629a7fd7d8 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 1.2E-30 T 22-04-2016 VCLMA_RS08915 042e481b1edd97667b34e7629a7fd7d8 220 SUPERFAMILY SSF56784 1 213 4.41E-32 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS08915 042e481b1edd97667b34e7629a7fd7d8 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 191 1.3E-29 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 VCLMA_RS08915 042e481b1edd97667b34e7629a7fd7d8 220 PANTHER PTHR10000 32 215 1.9E-117 T 22-04-2016 VCLMA_RS08915 042e481b1edd97667b34e7629a7fd7d8 220 PANTHER PTHR10000:SF17 32 215 1.9E-117 T 22-04-2016 VCLMA_RS11900 bc88e032bdb9c935c9351241373e3fd6 215 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 21 205 2.5E-83 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VCLMA_RS11900 bc88e032bdb9c935c9351241373e3fd6 215 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 37 209 38.263 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 VCLMA_RS11900 bc88e032bdb9c935c9351241373e3fd6 215 Pfam PF01583 Adenylylsulphate kinase 38 191 1.4E-71 T 22-04-2016 VCLMA_RS11900 bc88e032bdb9c935c9351241373e3fd6 215 Gene3D G3DSA:3.40.50.300 17 212 6.4E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11900 bc88e032bdb9c935c9351241373e3fd6 215 SUPERFAMILY SSF52540 34 208 5.76E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11900 bc88e032bdb9c935c9351241373e3fd6 215 PANTHER PTHR11055 17 215 6.2E-134 T 22-04-2016 VCLMA_RS09945 345cb9cbe2b154bf7a966ed571b7dc7f 180 Gene3D G3DSA:3.30.70.260 88 180 1.5E-39 T 22-04-2016 VCLMA_RS09945 345cb9cbe2b154bf7a966ed571b7dc7f 180 SUPERFAMILY SSF55021 87 176 1.33E-21 T 22-04-2016 VCLMA_RS09945 345cb9cbe2b154bf7a966ed571b7dc7f 180 PANTHER PTHR34875:SF3 1 180 8.0E-69 T 22-04-2016 VCLMA_RS09945 345cb9cbe2b154bf7a966ed571b7dc7f 180 PIRSF PIRSF028103 1 178 1.1E-60 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VCLMA_RS09945 345cb9cbe2b154bf7a966ed571b7dc7f 180 Pfam PF13740 ACT domain 3 78 9.2E-25 T 22-04-2016 VCLMA_RS09945 345cb9cbe2b154bf7a966ed571b7dc7f 180 SUPERFAMILY SSF55021 1 84 3.33E-18 T 22-04-2016 VCLMA_RS09945 345cb9cbe2b154bf7a966ed571b7dc7f 180 PANTHER PTHR34875 1 180 8.0E-69 T 22-04-2016 VCLMA_RS09945 345cb9cbe2b154bf7a966ed571b7dc7f 180 Gene3D G3DSA:3.30.70.260 1 84 7.5E-28 T 22-04-2016 VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 SMART SM00763 19 380 1.5E-215 T 22-04-2016 IPR013153 PrkA AAA domain VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 PIRSF PIRSF000549 1 644 2.2E-286 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 SUPERFAMILY SSF52540 71 145 4.73E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 SUPERFAMILY SSF52540 236 368 4.73E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 3.8E-74 T 22-04-2016 IPR010650 PrkA C-terminal domain VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 Gene3D G3DSA:3.40.50.300 243 329 4.2E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 Gene3D G3DSA:3.40.50.300 73 170 4.2E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 PANTHER PTHR30267:SF2 1 644 1.0E-299 T 22-04-2016 VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 PANTHER PTHR30267 1 644 1.0E-299 T 22-04-2016 VCLMA_RS08595 e36da27a8a8d98792fdff27ceec96383 644 Pfam PF08298 PrkA AAA domain 20 380 1.8E-173 T 22-04-2016 IPR013153 PrkA AAA domain VCLMA_RS04800 eac480e69c48938f82fd50bc6253c08c 329 PANTHER PTHR22960 7 285 3.3E-128 T 22-04-2016 VCLMA_RS04800 eac480e69c48938f82fd50bc6253c08c 329 Gene3D G3DSA:3.20.20.70 5 307 6.3E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS04800 eac480e69c48938f82fd50bc6253c08c 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.0E-38 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS04800 eac480e69c48938f82fd50bc6253c08c 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 5.7E-8 T 22-04-2016 VCLMA_RS04800 eac480e69c48938f82fd50bc6253c08c 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 36.757 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS04800 eac480e69c48938f82fd50bc6253c08c 329 SMART SM00729 14 222 1.6E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VCLMA_RS04800 eac480e69c48938f82fd50bc6253c08c 329 SUPERFAMILY SSF102114 7 287 9.81E-68 T 22-04-2016 VCLMA_RS04800 eac480e69c48938f82fd50bc6253c08c 329 Pfam PF04055 Radical SAM superfamily 19 181 9.3E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS04800 eac480e69c48938f82fd50bc6253c08c 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 329 1.9E-102 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 6.8E-164 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 5.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 5.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 5.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 5.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 5.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 5.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 5.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 5.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PANTHER PTHR21256:SF14 1 430 1.1E-299 T 22-04-2016 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 Pfam PF00815 Histidinol dehydrogenase 26 424 1.2E-169 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PANTHER PTHR21256 1 430 1.1E-299 T 22-04-2016 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 SUPERFAMILY SSF53720 4 424 5.89E-91 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 Gene3D G3DSA:3.40.50.1980 28 237 2.1E-82 T 22-04-2016 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 PIRSF PIRSF000099 1 427 5.0E-168 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS05330 4ccd20af670839cd981c88a74b70a3c8 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.983 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 SUPERFAMILY SSF55060 178 294 3.96E-31 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 96 107 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 TIGRFAM TIGR00191 thrB: homoserine kinase 3 314 7.8E-108 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 Pfam PF00288 GHMP kinases N terminal domain 90 156 5.2E-13 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 Gene3D G3DSA:3.30.70.890 174 304 4.3E-40 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 Hamap MF_00384 Homoserine kinase [thrB]. 3 313 29.838 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 Gene3D G3DSA:3.30.230.10 2 165 8.1E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 SUPERFAMILY SSF54211 3 191 5.31E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 PRINTS PR00958 Homoserine kinase signature 143 156 1.6E-31 T 22-04-2016 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 PRINTS PR00958 Homoserine kinase signature 10 25 1.6E-31 T 22-04-2016 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 PRINTS PR00958 Homoserine kinase signature 181 198 1.6E-31 T 22-04-2016 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 PRINTS PR00958 Homoserine kinase signature 103 118 1.6E-31 T 22-04-2016 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 PRINTS PR00958 Homoserine kinase signature 260 275 1.6E-31 T 22-04-2016 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 Pfam PF08544 GHMP kinases C terminal 223 291 7.4E-8 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 PANTHER PTHR20861:SF1 1 317 2.9E-125 T 22-04-2016 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 PIRSF PIRSF000676 1 316 8.3E-80 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 VCLMA_RS10950 718ae25997dce6a961cdb3cd40e818de 318 PANTHER PTHR20861 1 317 2.9E-125 T 22-04-2016 VCLMA_RS14200 b99179496d38f49c3f28d39dc7e68e30 126 SUPERFAMILY SSF53383 1 126 3.07E-37 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS14200 b99179496d38f49c3f28d39dc7e68e30 126 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 1 126 4.0E-60 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VCLMA_RS14200 b99179496d38f49c3f28d39dc7e68e30 126 PANTHER PTHR11751 1 126 1.3E-80 T 22-04-2016 VCLMA_RS14200 b99179496d38f49c3f28d39dc7e68e30 126 PANTHER PTHR11751:SF406 1 126 1.3E-80 T 22-04-2016 VCLMA_RS14200 b99179496d38f49c3f28d39dc7e68e30 126 Gene3D G3DSA:3.40.640.10 1 126 1.6E-46 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 SUPERFAMILY SSF143968 323 459 1.12E-50 T 22-04-2016 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 Gene3D G3DSA:3.40.1670.10 337 453 8.8E-48 T 22-04-2016 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 Gene3D G3DSA:3.40.1670.10 487 587 4.9E-28 T 22-04-2016 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 455 4.7E-163 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 PANTHER PTHR30108 1 460 6.6E-249 T 22-04-2016 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 SUPERFAMILY SSF143968 477 611 3.14E-29 T 22-04-2016 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 431 9.3E-162 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 473 565 1.2E-16 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 SUPERFAMILY SSF50475 3 322 5.1E-124 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 Gene3D G3DSA:1.20.5.570 588 613 1.6E-17 T 22-04-2016 VCLMA_RS01480 2d6d298d570ed61d344ba3ce81364db2 613 PANTHER PTHR30108:SF1 1 460 6.6E-249 T 22-04-2016 VCLMA_RS03655 f2b68c475f8e7119da7374507ce36953 112 Gene3D G3DSA:3.10.20.30 4 108 6.0E-35 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS03655 f2b68c475f8e7119da7374507ce36953 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 VCLMA_RS03655 f2b68c475f8e7119da7374507ce36953 112 PRINTS PR00355 Adrenodoxin signature 83 91 5.7E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VCLMA_RS03655 f2b68c475f8e7119da7374507ce36953 112 PRINTS PR00355 Adrenodoxin signature 60 74 5.7E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VCLMA_RS03655 f2b68c475f8e7119da7374507ce36953 112 PRINTS PR00355 Adrenodoxin signature 42 52 5.7E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 VCLMA_RS03655 f2b68c475f8e7119da7374507ce36953 112 SUPERFAMILY SSF54292 4 107 1.28E-33 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS03655 f2b68c475f8e7119da7374507ce36953 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 91 3.4E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS03655 f2b68c475f8e7119da7374507ce36953 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 5.2E-62 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VCLMA_RS03655 f2b68c475f8e7119da7374507ce36953 112 PANTHER PTHR23426 7 112 5.9E-41 T 22-04-2016 VCLMA_RS04635 53cc48c97b5f0bd36f6541ff8120da25 528 Pfam PF00999 Sodium/hydrogen exchanger family 4 347 5.9E-35 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VCLMA_RS04635 53cc48c97b5f0bd36f6541ff8120da25 528 SUPERFAMILY SSF51735 387 518 3.19E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04635 53cc48c97b5f0bd36f6541ff8120da25 528 PANTHER PTHR16254:SF14 3 527 2.9E-182 T 22-04-2016 VCLMA_RS04635 53cc48c97b5f0bd36f6541ff8120da25 528 Gene3D G3DSA:3.40.50.720 380 526 6.2E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04635 53cc48c97b5f0bd36f6541ff8120da25 528 Pfam PF02254 TrkA-N domain 388 504 6.4E-21 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VCLMA_RS04635 53cc48c97b5f0bd36f6541ff8120da25 528 PANTHER PTHR16254 3 527 2.9E-182 T 22-04-2016 VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 PANTHER PTHR13779:SF25 1 333 3.5E-191 T 22-04-2016 VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 Gene3D G3DSA:1.10.10.10 262 333 3.2E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 Gene3D G3DSA:3.40.50.300 25 182 5.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 PANTHER PTHR13779 1 333 3.5E-191 T 22-04-2016 VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 2.0E-39 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 3.0E-33 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 SMART SM00382 56 183 3.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 SUPERFAMILY SSF52540 25 256 6.23E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 SUPERFAMILY SSF46785 262 332 1.97E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 183.21 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 Gene3D G3DSA:1.10.8.60 188 260 1.7E-33 T 22-04-2016 VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 240 7.7E-118 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VCLMA_RS08460 8057be43c09f6a641cded1410e3e4f53 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 9.9E-148 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VCLMA_RS01890 e3dc4a5f878cd8aa7db895e5106725d0 154 PANTHER PTHR33202 7 151 7.9E-71 T 22-04-2016 VCLMA_RS01890 e3dc4a5f878cd8aa7db895e5106725d0 154 SUPERFAMILY SSF46785 12 144 1.59E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS01890 e3dc4a5f878cd8aa7db895e5106725d0 154 Pfam PF01475 Ferric uptake regulator family 20 138 4.5E-19 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VCLMA_RS01890 e3dc4a5f878cd8aa7db895e5106725d0 154 Gene3D G3DSA:1.10.10.10 11 82 3.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS01890 e3dc4a5f878cd8aa7db895e5106725d0 154 PANTHER PTHR33202:SF6 7 151 7.9E-71 T 22-04-2016 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PANTHER PTHR11946:SF7 240 570 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PANTHER PTHR11946:SF7 613 858 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 SUPERFAMILY SSF47323 661 857 3.18E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 SUPERFAMILY SSF50677 226 415 1.47E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Gene3D G3DSA:3.40.50.620 425 572 8.0E-157 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Gene3D G3DSA:3.40.50.620 4 222 8.0E-157 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Gene3D G3DSA:3.40.50.620 617 646 8.0E-157 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.385 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Gene3D G3DSA:1.10.730.10 647 793 2.6E-46 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.3E-79 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 3.3E-26 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 7.6E-9 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 1.4E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 819 2.4E-15 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PANTHER PTHR11946 240 570 0.0 T 22-04-2016 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PANTHER PTHR11946 613 858 0.0 T 22-04-2016 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 Gene3D G3DSA:3.90.740.10 223 424 1.7E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 SUPERFAMILY SSF52374 4 226 1.77E-145 T 22-04-2016 VCLMA_RS04465 78fbb18defaf0c30ca59a16c88f31bee 858 SUPERFAMILY SSF52374 416 667 1.77E-145 T 22-04-2016 VCLMA_RS07345 7b0ea16d02e2152da8c2ea8c8dfdaee0 178 Pfam PF12796 Ankyrin repeats (3 copies) 46 131 7.4E-12 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain VCLMA_RS07345 7b0ea16d02e2152da8c2ea8c8dfdaee0 178 SUPERFAMILY SSF48403 42 163 2.02E-25 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain VCLMA_RS07345 7b0ea16d02e2152da8c2ea8c8dfdaee0 178 PANTHER PTHR24193 44 163 6.1E-23 T 22-04-2016 VCLMA_RS07345 7b0ea16d02e2152da8c2ea8c8dfdaee0 178 SMART SM00248 42 71 26.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 VCLMA_RS07345 7b0ea16d02e2152da8c2ea8c8dfdaee0 178 SMART SM00248 75 104 0.018 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 VCLMA_RS07345 7b0ea16d02e2152da8c2ea8c8dfdaee0 178 SMART SM00248 108 139 1000.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 VCLMA_RS07345 7b0ea16d02e2152da8c2ea8c8dfdaee0 178 Gene3D G3DSA:1.25.40.20 47 163 1.0E-25 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain VCLMA_RS00325 6683feb8d54ea2367a711ad29de3a7b7 440 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 195 409 19.751 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VCLMA_RS00325 6683feb8d54ea2367a711ad29de3a7b7 440 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 215 403 2.5E-46 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VCLMA_RS00325 6683feb8d54ea2367a711ad29de3a7b7 440 Gene3D G3DSA:3.20.20.70 196 408 3.0E-64 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS00325 6683feb8d54ea2367a711ad29de3a7b7 440 Pfam PF02581 Thiamine monophosphate synthase/TENI 214 391 5.1E-52 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VCLMA_RS00325 6683feb8d54ea2367a711ad29de3a7b7 440 PANTHER PTHR20857 196 416 2.6E-64 T 22-04-2016 VCLMA_RS00325 6683feb8d54ea2367a711ad29de3a7b7 440 SUPERFAMILY SSF51391 205 408 4.32E-61 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 1.4E-46 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 Gene3D G3DSA:3.40.190.10 2 138 4.5E-49 T 22-04-2016 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 203 297 3.6E-29 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 Pfam PF08029 HisG, C-terminal domain 222 295 6.9E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 SUPERFAMILY SSF53850 5 222 1.28E-67 T 22-04-2016 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 PANTHER PTHR21403 1 298 3.5E-125 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 SUPERFAMILY SSF54913 225 297 1.56E-20 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.616 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 Gene3D G3DSA:3.30.70.120 225 298 3.3E-30 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 8.9E-56 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 VCLMA_RS05325 ae28296bbb4ec9d8708116f4360a7792 298 PANTHER PTHR21403:SF0 1 298 3.5E-125 T 22-04-2016 VCLMA_RS04600 d2f48208494e67058a8a864a643658fe 282 PANTHER PTHR26402:SF483 9 252 1.2E-150 T 22-04-2016 VCLMA_RS04600 d2f48208494e67058a8a864a643658fe 282 SUPERFAMILY SSF46894 6 109 1.02E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS04600 d2f48208494e67058a8a864a643658fe 282 SMART SM00862 30 107 3.0E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS04600 d2f48208494e67058a8a864a643658fe 282 Gene3D G3DSA:1.10.10.10 11 109 5.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04600 d2f48208494e67058a8a864a643658fe 282 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 107 2.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS04600 d2f48208494e67058a8a864a643658fe 282 PANTHER PTHR26402 9 252 1.2E-150 T 22-04-2016 VCLMA_RS04925 f1d59532cbff984e7bbcf0ca670c0350 291 Gene3D G3DSA:3.40.190.10 177 257 9.4E-16 T 22-04-2016 VCLMA_RS04925 f1d59532cbff984e7bbcf0ca670c0350 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.0E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS04925 f1d59532cbff984e7bbcf0ca670c0350 291 Pfam PF03466 LysR substrate binding domain 88 285 7.8E-41 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS04925 f1d59532cbff984e7bbcf0ca670c0350 291 Gene3D G3DSA:1.10.10.10 1 82 2.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04925 f1d59532cbff984e7bbcf0ca670c0350 291 PANTHER PTHR30537 1 286 7.0E-197 T 22-04-2016 VCLMA_RS04925 f1d59532cbff984e7bbcf0ca670c0350 291 SUPERFAMILY SSF46785 1 84 6.86E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04925 f1d59532cbff984e7bbcf0ca670c0350 291 SUPERFAMILY SSF53850 88 288 1.49E-38 T 22-04-2016 VCLMA_RS04925 f1d59532cbff984e7bbcf0ca670c0350 291 PANTHER PTHR30537:SF19 1 286 7.0E-197 T 22-04-2016 VCLMA_RS04925 f1d59532cbff984e7bbcf0ca670c0350 291 Gene3D G3DSA:3.40.190.10 91 176 2.0E-23 T 22-04-2016 VCLMA_RS06715 8c753ba125e4cfa148c9f3271819a2e7 256 SUPERFAMILY SSF161098 5 254 4.3E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06715 8c753ba125e4cfa148c9f3271819a2e7 256 Gene3D G3DSA:1.10.3720.10 4 254 1.3E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06715 8c753ba125e4cfa148c9f3271819a2e7 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 251 9.8E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06715 8c753ba125e4cfa148c9f3271819a2e7 256 PANTHER PTHR30222 1 256 6.4E-168 T 22-04-2016 VCLMA_RS06715 8c753ba125e4cfa148c9f3271819a2e7 256 PANTHER PTHR30222:SF6 1 256 6.4E-168 T 22-04-2016 VCLMA_RS14075 490c5ae7e6bafb82684d8deb450763c4 106 SUPERFAMILY SSF53098 39 105 1.18E-14 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS14075 490c5ae7e6bafb82684d8deb450763c4 106 Pfam PF00665 Integrase core domain 46 106 3.3E-11 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VCLMA_RS14075 490c5ae7e6bafb82684d8deb450763c4 106 PANTHER PTHR32552 1 104 9.3E-30 T 22-04-2016 VCLMA_RS14075 490c5ae7e6bafb82684d8deb450763c4 106 Gene3D G3DSA:3.30.420.10 41 106 7.5E-14 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS02545 d304b38713f23d25126641235e1607a9 232 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 101 108 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS02545 d304b38713f23d25126641235e1607a9 232 PANTHER PTHR32125:SF4 1 231 7.6E-86 T 22-04-2016 VCLMA_RS02545 d304b38713f23d25126641235e1607a9 232 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 225 2.0E-73 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS02545 d304b38713f23d25126641235e1607a9 232 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 226 1.4E-78 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS02545 d304b38713f23d25126641235e1607a9 232 Gene3D G3DSA:3.90.550.10 2 230 1.0E-76 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS02545 d304b38713f23d25126641235e1607a9 232 SUPERFAMILY SSF53448 3 226 1.88E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS02545 d304b38713f23d25126641235e1607a9 232 PANTHER PTHR32125 1 231 7.6E-86 T 22-04-2016 VCLMA_RS02545 d304b38713f23d25126641235e1607a9 232 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 228 31.262 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 SUPERFAMILY SSF55785 7 88 6.7E-9 T 22-04-2016 IPR000014 PAS domain VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 SUPERFAMILY SSF55874 180 338 1.57E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 125 189 1.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 Gene3D G3DSA:3.30.450.20 16 117 2.0E-8 T 22-04-2016 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 PANTHER PTHR24423 5 350 5.8E-133 T 22-04-2016 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 339 5.5E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 Pfam PF13188 PAS domain 21 64 5.3E-7 T 22-04-2016 IPR000014 PAS domain VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 SMART SM00091 21 84 3.1E-5 T 22-04-2016 IPR000014 PAS domain VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 299 1.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 271 285 1.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 1.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 337 1.1E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 SUPERFAMILY SSF47384 120 191 5.3E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 Gene3D G3DSA:3.30.565.10 196 339 1.0E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 PANTHER PTHR24423:SF474 5 350 5.8E-133 T 22-04-2016 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 SMART SM00388 125 191 8.8E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 SMART SM00387 234 340 1.9E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS09850 74014b6a3ca449bfa74584bb3bc004a9 351 Gene3D G3DSA:1.10.287.130 122 187 3.8E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS03285 cd7c92568dfb8ad67b27701a722e4dda 271 PANTHER PTHR30589 2 261 3.5E-124 T 22-04-2016 VCLMA_RS03285 cd7c92568dfb8ad67b27701a722e4dda 271 PANTHER PTHR30589:SF0 2 261 3.5E-124 T 22-04-2016 VCLMA_RS03285 cd7c92568dfb8ad67b27701a722e4dda 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.283 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VCLMA_RS03285 cd7c92568dfb8ad67b27701a722e4dda 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 261 2.2E-91 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VCLMA_RS03285 cd7c92568dfb8ad67b27701a722e4dda 271 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VCLMA_RS03285 cd7c92568dfb8ad67b27701a722e4dda 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 6.7E-83 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 SMART SM00490 461 547 9.9E-19 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:3.30.2060.10 159 231 1.6E-12 T 22-04-2016 VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Pfam PF04851 Type III restriction enzyme, res subunit 16 119 2.3E-8 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 SUPERFAMILY SSF52540 3 416 1.13E-137 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:3.40.50.300 5 89 1.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:3.40.50.300 279 339 1.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:3.40.50.300 389 409 1.0E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 SUPERFAMILY SSF46600 627 672 9.68E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:3.40.50.300 420 582 1.5E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Pfam PF12344 Ultra-violet resistance protein B 553 594 2.3E-21 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 SMART SM00487 9 426 5.0E-26 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Gene3D G3DSA:4.10.860.10 632 674 4.1E-18 T 22-04-2016 IPR001943 UVR domain GO:0005515 VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Pfam PF00271 Helicase conserved C-terminal domain 442 546 1.9E-17 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 PANTHER PTHR24029 1 674 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Pfam PF02151 UvrB/uvrC motif 636 671 5.5E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 SUPERFAMILY SSF52540 37 82 1.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 SUPERFAMILY SSF52540 460 582 1.3E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04775 ad973f20e0f77caaa22f3e74f2e1223a 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.047 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 VCLMA_RS11880 c0fafb4788c065ba3698b48123424de8 238 PANTHER PTHR24220 14 228 8.9E-91 T 22-04-2016 VCLMA_RS11880 c0fafb4788c065ba3698b48123424de8 238 SUPERFAMILY SSF52540 8 228 6.97E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11880 c0fafb4788c065ba3698b48123424de8 238 SMART SM00382 39 232 4.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS11880 c0fafb4788c065ba3698b48123424de8 238 Gene3D G3DSA:3.40.50.300 12 224 5.5E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11880 c0fafb4788c065ba3698b48123424de8 238 PANTHER PTHR24220:SF578 14 228 8.9E-91 T 22-04-2016 VCLMA_RS11880 c0fafb4788c065ba3698b48123424de8 238 Pfam PF00005 ABC transporter 32 184 1.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS08990 c3fae666cbab29732a6a0cc6072dcedf 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 29.517 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VCLMA_RS08990 c3fae666cbab29732a6a0cc6072dcedf 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 218 2.8E-86 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 VCLMA_RS08990 c3fae666cbab29732a6a0cc6072dcedf 220 PANTHER PTHR34108:SF1 1 218 4.2E-69 T 22-04-2016 VCLMA_RS08990 c3fae666cbab29732a6a0cc6072dcedf 220 Gene3D G3DSA:2.160.20.70 100 218 1.4E-39 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VCLMA_RS08990 c3fae666cbab29732a6a0cc6072dcedf 220 SUPERFAMILY SSF63848 113 218 4.18E-32 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VCLMA_RS08990 c3fae666cbab29732a6a0cc6072dcedf 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 4.1E-37 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VCLMA_RS08990 c3fae666cbab29732a6a0cc6072dcedf 220 PANTHER PTHR34108 1 218 4.2E-69 T 22-04-2016 VCLMA_RS08990 c3fae666cbab29732a6a0cc6072dcedf 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 7.4E-33 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 PANTHER PTHR30591 1 1132 0.0 T 22-04-2016 VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 SUPERFAMILY SSF52540 2 352 1.99E-124 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 PANTHER PTHR30591:SF1 1 1132 0.0 T 22-04-2016 VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 Gene3D G3DSA:3.40.50.300 663 759 1.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 Gene3D G3DSA:3.40.50.300 364 457 1.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 Gene3D G3DSA:1.10.10.160 86 182 1.6E-36 T 22-04-2016 IPR013986 DExx box DNA helicase domain VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 809 1.2E-297 T 22-04-2016 VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1109 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 PIRSF PIRSF000980 1 1148 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 SUPERFAMILY SSF52980 826 1135 4.18E-74 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 SUPERFAMILY SSF52540 367 810 1.05E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10770 5849992f10d31fa83b6f8a2516c1abd5 1148 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1145 13.305 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 PANTHER PTHR26402 2 115 3.0E-37 T 22-04-2016 VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 Pfam PF04397 LytTr DNA-binding domain 142 234 1.2E-25 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 Gene3D G3DSA:2.20.25.10 217 236 6.4E-7 T 22-04-2016 VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 Gene3D G3DSA:2.40.50.40 133 197 6.3E-12 T 22-04-2016 VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 SMART SM00448 2 112 9.6E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 PANTHER PTHR26402:SF524 2 115 3.0E-37 T 22-04-2016 VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 SUPERFAMILY SSF52172 1 123 8.11E-32 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 Pfam PF00072 Response regulator receiver domain 5 112 8.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 Gene3D G3DSA:3.40.50.2300 1 123 5.4E-33 T 22-04-2016 VCLMA_RS03370 cf1a03913174fba7696ba0ef9531ef99 237 SMART SM00850 141 235 1.1E-29 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 VCLMA_RS09775 04f9e5bc38b03fa26a339adb724b3194 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 256 8.9E-80 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VCLMA_RS09775 04f9e5bc38b03fa26a339adb724b3194 260 PANTHER PTHR30065:SF1 1 257 3.4E-95 T 22-04-2016 VCLMA_RS09775 04f9e5bc38b03fa26a339adb724b3194 260 Pfam PF01311 Bacterial export proteins, family 1 13 246 1.5E-56 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VCLMA_RS09775 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 3.741192E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VCLMA_RS09775 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 3.741192E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VCLMA_RS09775 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 3.741192E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VCLMA_RS09775 04f9e5bc38b03fa26a339adb724b3194 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 3.741192E-16 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VCLMA_RS09775 04f9e5bc38b03fa26a339adb724b3194 260 PANTHER PTHR30065 1 257 3.4E-95 T 22-04-2016 VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 Gene3D G3DSA:1.10.10.10 7 85 6.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 SUPERFAMILY SSF53850 92 299 1.05E-29 T 22-04-2016 VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 Pfam PF03466 LysR substrate binding domain 91 296 2.1E-29 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 SUPERFAMILY SSF46785 9 113 1.92E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 PANTHER PTHR30537:SF8 1 302 1.3E-129 T 22-04-2016 VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 PANTHER PTHR30537 1 302 1.3E-129 T 22-04-2016 VCLMA_RS03820 f700927d4b025df30fa63cf51a69ed83 302 Gene3D G3DSA:3.40.190.10 94 197 2.9E-27 T 22-04-2016 VCLMA_RS08260 aa7a41b76ef8d53e1ceb840349b13159 240 PANTHER PTHR36204:SF1 8 240 4.3E-119 T 22-04-2016 VCLMA_RS08260 aa7a41b76ef8d53e1ceb840349b13159 240 Gene3D G3DSA:3.20.20.70 9 231 2.9E-81 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS08260 aa7a41b76ef8d53e1ceb840349b13159 240 SUPERFAMILY SSF51366 19 229 4.24E-49 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VCLMA_RS08260 aa7a41b76ef8d53e1ceb840349b13159 240 PANTHER PTHR36204 8 240 4.3E-119 T 22-04-2016 VCLMA_RS08260 aa7a41b76ef8d53e1ceb840349b13159 240 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 41 231 2.5E-89 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 VCLMA_RS08260 aa7a41b76ef8d53e1ceb840349b13159 240 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 17 231 35.436 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 ProSitePatterns PS00163 Fumarate lyases signature. 330 339 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 16 482 2.1E-254 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 PANTHER PTHR11444:SF25 3 482 4.8E-297 T 22-04-2016 VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 Gene3D G3DSA:1.10.40.30 421 472 5.3E-20 T 22-04-2016 VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 Gene3D G3DSA:1.20.200.10 153 413 1.5E-87 T 22-04-2016 VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 330 346 1.6E-25 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 284 311 1.6E-25 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.6E-25 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 PRINTS PR00149 Fumarate lyase superfamily signature 193 211 1.6E-25 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 SUPERFAMILY SSF48557 14 468 1.16E-144 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 Pfam PF10415 Fumarase C C-terminus 421 474 3.5E-18 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 Gene3D G3DSA:1.10.275.10 15 152 4.7E-55 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 PANTHER PTHR11444 3 482 4.8E-297 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12560 f529e5ba8d986584caefa64d6ad22eb3 483 Pfam PF00206 Lyase 23 355 5.4E-105 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 SUPERFAMILY SSF56801 13 553 4.84E-147 T 22-04-2016 VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 Gene3D G3DSA:3.40.50.980 217 379 1.3E-41 T 22-04-2016 VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 1.5E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 Pfam PF00501 AMP-binding enzyme 29 461 1.1E-106 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 Gene3D G3DSA:3.30.300.30 456 552 2.1E-26 T 22-04-2016 VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 Gene3D G3DSA:3.40.50.980 185 216 2.8E-39 T 22-04-2016 VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 Gene3D G3DSA:3.40.50.980 24 152 2.8E-39 T 22-04-2016 VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 Gene3D G3DSA:2.30.38.10 380 455 1.1E-29 T 22-04-2016 VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 22-04-2016 IPR020845 AMP-binding, conserved site VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 PANTHER PTHR24096 176 554 8.8E-167 T 22-04-2016 VCLMA_RS09120 64bd27a1956d6363fe5450b22e3a9f82 566 PANTHER PTHR24096 8 153 8.8E-167 T 22-04-2016 VCLMA_RS04460 694c1b2a08fc9a45de3379609aafcb4a 204 Gene3D G3DSA:3.30.160.150 24 171 9.8E-57 T 22-04-2016 VCLMA_RS04460 694c1b2a08fc9a45de3379609aafcb4a 204 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 25.626 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VCLMA_RS04460 694c1b2a08fc9a45de3379609aafcb4a 204 PANTHER PTHR38098 5 204 2.0E-67 T 22-04-2016 VCLMA_RS04460 694c1b2a08fc9a45de3379609aafcb4a 204 PANTHER PTHR38098:SF1 5 204 2.0E-67 T 22-04-2016 VCLMA_RS04460 694c1b2a08fc9a45de3379609aafcb4a 204 Pfam PF04390 Lipopolysaccharide-assembly 16 161 4.9E-18 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VCLMA_RS09820 9f45582a7837858b1dd4a8c09fa28690 439 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 21 437 3.3E-174 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS09820 9f45582a7837858b1dd4a8c09fa28690 439 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS09820 9f45582a7837858b1dd4a8c09fa28690 439 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 435 2.6E-194 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS09820 9f45582a7837858b1dd4a8c09fa28690 439 PANTHER PTHR15184:SF9 1 437 2.1E-228 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS09820 9f45582a7837858b1dd4a8c09fa28690 439 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 4.1E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS09820 9f45582a7837858b1dd4a8c09fa28690 439 PANTHER PTHR15184 1 437 2.1E-228 T 22-04-2016 VCLMA_RS09820 9f45582a7837858b1dd4a8c09fa28690 439 SMART SM00382 158 342 6.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS09820 9f45582a7837858b1dd4a8c09fa28690 439 Gene3D G3DSA:3.40.50.300 94 359 2.5E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09820 9f45582a7837858b1dd4a8c09fa28690 439 SUPERFAMILY SSF52540 94 362 9.62E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06090 a1997388803cea63d800fe022d90539d 233 Pfam PF00929 Exonuclease 45 214 5.2E-15 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS06090 a1997388803cea63d800fe022d90539d 233 PANTHER PTHR30231:SF11 182 228 8.5E-136 T 22-04-2016 VCLMA_RS06090 a1997388803cea63d800fe022d90539d 233 PANTHER PTHR30231:SF11 6 166 8.5E-136 T 22-04-2016 VCLMA_RS06090 a1997388803cea63d800fe022d90539d 233 PANTHER PTHR30231 182 228 8.5E-136 T 22-04-2016 VCLMA_RS06090 a1997388803cea63d800fe022d90539d 233 PANTHER PTHR30231 6 166 8.5E-136 T 22-04-2016 VCLMA_RS06090 a1997388803cea63d800fe022d90539d 233 SMART SM00479 43 223 1.6E-21 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS06090 a1997388803cea63d800fe022d90539d 233 SUPERFAMILY SSF53098 37 221 3.04E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS06090 a1997388803cea63d800fe022d90539d 233 Gene3D G3DSA:3.30.420.10 37 223 1.9E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 29 653 0.0 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 Gene3D G3DSA:3.90.780.10 366 602 2.1E-42 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 ProSitePatterns PS00786 5'-nucleotidase signature 2. 115 126 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 SUPERFAMILY SSF55816 361 603 3.66E-38 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 Pfam PF00149 Calcineurin-like phosphoesterase 30 265 1.3E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 Pfam PF02872 5'-nucleotidase, C-terminal domain 362 554 1.3E-22 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 Gene3D G3DSA:3.60.21.10 19 365 4.3E-96 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 PANTHER PTHR11575 1 651 0.0 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 SUPERFAMILY SSF56300 24 360 4.43E-87 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 PRINTS PR01607 Apyrase family signature 434 457 1.8E-30 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 PRINTS PR01607 Apyrase family signature 28 46 1.8E-30 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 PRINTS PR01607 Apyrase family signature 289 309 1.8E-30 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 PRINTS PR01607 Apyrase family signature 249 272 1.8E-30 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 PRINTS PR01607 Apyrase family signature 536 555 1.8E-30 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 PRINTS PR01607 Apyrase family signature 221 238 1.8E-30 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11920 20d22b17d1b7ba53e312b2798f6ca7fc 653 PANTHER PTHR11575:SF6 1 651 0.0 T 22-04-2016 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 Gene3D G3DSA:3.50.7.10 189 368 5.0E-99 T 22-04-2016 IPR027409 GroEL-like apical domain VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 PANTHER PTHR11353 2 544 3.6E-256 T 22-04-2016 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 Hamap MF_00600 60 kDa chaperonin [groL]. 2 543 41.585 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF54849 137 203 3.2E-24 T 22-04-2016 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 Gene3D G3DSA:1.10.560.10 3 188 6.7E-49 T 22-04-2016 IPR027413 GroEL-like equatorial domain VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 2.4E-95 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.8E-253 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 Gene3D G3DSA:1.10.560.10 369 518 5.7E-41 T 22-04-2016 IPR027413 GroEL-like equatorial domain VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF48592 406 521 9.92E-77 T 22-04-2016 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF48592 7 134 9.92E-77 T 22-04-2016 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 SUPERFAMILY SSF52029 185 376 2.27E-83 T 22-04-2016 IPR027409 GroEL-like apical domain VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VCLMA_RS12400 6de61bd367e7637163184267efeedf49 544 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 PANTHER PTHR10000 1 268 9.6E-154 T 22-04-2016 VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 235 1.2E-26 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 Gene3D G3DSA:3.30.1240.10 87 180 1.3E-33 T 22-04-2016 VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 Gene3D G3DSA:3.40.50.1000 181 267 1.3E-57 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 Gene3D G3DSA:3.40.50.1000 1 75 1.3E-57 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 22-04-2016 VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 SUPERFAMILY SSF56784 1 265 4.91E-76 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 3.3E-67 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 PANTHER PTHR10000:SF29 1 268 9.6E-154 T 22-04-2016 VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 VCLMA_RS06440 3d5391d9b540fb1c6a20b889660a5637 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 8.4E-67 T 22-04-2016 IPR000150 Cof protein GO:0016787 VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 Pfam PF08402 TOBE domain 286 365 5.0E-12 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 42 365 8.1E-158 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 PANTHER PTHR24220:SF150 13 312 2.8E-163 T 22-04-2016 VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 SUPERFAMILY SSF50331 244 357 3.46E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 Pfam PF00005 ABC transporter 29 168 7.2E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 PANTHER PTHR24220 13 312 2.8E-163 T 22-04-2016 VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 SUPERFAMILY SSF52540 12 251 1.91E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 Gene3D G3DSA:3.40.50.300 10 242 1.8E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 SMART SM00382 36 219 5.1E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS06725 963b64a2a0c41bac50c73d78fc491587 371 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS00170 bd8f41471802bac43e685c56cb0cb1f2 328 SUPERFAMILY SSF56112 6 328 3.35E-90 T 22-04-2016 IPR011009 Protein kinase-like domain VCLMA_RS00170 bd8f41471802bac43e685c56cb0cb1f2 328 Gene3D G3DSA:3.90.1200.10 109 325 1.5E-49 T 22-04-2016 VCLMA_RS00170 bd8f41471802bac43e685c56cb0cb1f2 328 Pfam PF01636 Phosphotransferase enzyme family 35 262 5.2E-42 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase VCLMA_RS00170 bd8f41471802bac43e685c56cb0cb1f2 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 47.158 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VCLMA_RS00170 bd8f41471802bac43e685c56cb0cb1f2 328 PANTHER PTHR39573:SF1 2 328 4.3E-192 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VCLMA_RS00170 bd8f41471802bac43e685c56cb0cb1f2 328 Gene3D G3DSA:3.30.200.20 37 107 0.001 T 22-04-2016 VCLMA_RS00170 bd8f41471802bac43e685c56cb0cb1f2 328 PANTHER PTHR39573 2 328 4.3E-192 T 22-04-2016 VCLMA_RS01105 6ef06f1c437226a01fffe20b9cae426a 247 Gene3D G3DSA:3.90.550.10 2 239 2.0E-13 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS01105 6ef06f1c437226a01fffe20b9cae426a 247 PIRSF PIRSF028162 1 246 4.1E-103 T 22-04-2016 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted VCLMA_RS01105 6ef06f1c437226a01fffe20b9cae426a 247 SUPERFAMILY SSF53448 2 239 6.61E-21 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 256 6.7E-15 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 Gene3D G3DSA:3.40.930.10 1 148 1.8E-48 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 3.1E-29 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 618 5.8E-85 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 Gene3D G3DSA:3.40.50.2300 160 259 2.7E-39 T 22-04-2016 VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 Pfam PF02378 Phosphotransferase system, EIIC 290 565 5.3E-16 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 4.8E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 PANTHER PTHR30505 42 590 0.0 T 22-04-2016 VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 SUPERFAMILY SSF55804 1 146 8.89E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 SUPERFAMILY SSF52794 164 259 7.85E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 PANTHER PTHR30505:SF1 42 590 0.0 T 22-04-2016 VCLMA_RS08375 399644a318e31bc0eb6b1bb4ea57e681 633 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 7.2E-44 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS10800 bdaf53f08ee2468ca035d335fcd5ec55 363 Gene3D G3DSA:3.40.630.30 1 146 1.9E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS10800 bdaf53f08ee2468ca035d335fcd5ec55 363 PANTHER PTHR23091:SF256 1 178 2.0E-70 T 22-04-2016 VCLMA_RS10800 bdaf53f08ee2468ca035d335fcd5ec55 363 PANTHER PTHR23091 1 178 2.0E-70 T 22-04-2016 VCLMA_RS10800 bdaf53f08ee2468ca035d335fcd5ec55 363 Pfam PF13673 Acetyltransferase (GNAT) domain 20 126 2.8E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS10800 bdaf53f08ee2468ca035d335fcd5ec55 363 Pfam PF11814 Peptidase_C39 like family 157 359 1.8E-77 T 22-04-2016 IPR021770 Protein of unknown function DUF3335 VCLMA_RS10800 bdaf53f08ee2468ca035d335fcd5ec55 363 SUPERFAMILY SSF55729 1 147 9.96E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 PANTHER PTHR30330 1 466 4.2E-298 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 80 95 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 Pfam PF01235 Sodium:alanine symporter family 41 445 1.8E-163 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 TIGRFAM TIGR00835 agcS: amino acid carrier protein 6 434 8.5E-164 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 PANTHER PTHR30330:SF1 1 466 4.2E-298 T 22-04-2016 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 PRINTS PR00175 Sodium/alanine symporter signature 80 102 9.9E-59 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 PRINTS PR00175 Sodium/alanine symporter signature 296 314 9.9E-59 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 PRINTS PR00175 Sodium/alanine symporter signature 199 218 9.9E-59 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 PRINTS PR00175 Sodium/alanine symporter signature 403 423 9.9E-59 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 PRINTS PR00175 Sodium/alanine symporter signature 171 189 9.9E-59 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS10915 1836a59c0612290ec4bb64e4c6b0b30c 469 PRINTS PR00175 Sodium/alanine symporter signature 342 364 9.9E-59 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 PANTHER PTHR30085:SF1 259 401 6.2E-183 T 22-04-2016 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 PANTHER PTHR30085:SF1 1 180 6.2E-183 T 22-04-2016 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 229 396 8.6E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 91 155 6.7E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 SUPERFAMILY SSF161098 91 161 8.24E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 PANTHER PTHR30085 259 401 6.2E-183 T 22-04-2016 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 PANTHER PTHR30085 1 180 6.2E-183 T 22-04-2016 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 SUPERFAMILY SSF161098 193 382 1.96E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 Gene3D G3DSA:1.10.3720.10 223 224 1.4E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 Gene3D G3DSA:1.10.3720.10 267 396 1.4E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06425 479f798d6b080f31c88165dfa8ed562d 401 Gene3D G3DSA:1.10.3720.10 90 159 1.4E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 Gene3D G3DSA:3.30.70.920 65 161 6.6E-33 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.1E-21 T 22-04-2016 VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 PANTHER PTHR30154 4 162 3.9E-106 T 22-04-2016 VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 SMART SM00344 12 121 1.4E-54 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 Gene3D G3DSA:1.10.10.10 13 64 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 7.6E-24 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 SUPERFAMILY SSF46785 12 70 3.07E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 PANTHER PTHR30154:SF0 4 162 3.9E-106 T 22-04-2016 VCLMA_RS08745 f2a84abe1e146181795b2e6b09e8b2e9 164 SUPERFAMILY SSF54909 74 158 4.69E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 Gene3D G3DSA:3.40.50.300 210 368 2.0E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 SUPERFAMILY SSF52540 73 354 7.08E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 PANTHER PTHR24031 4 444 2.8E-264 T 22-04-2016 VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 Pfam PF03880 DbpA RNA binding domain 387 457 5.2E-22 T 22-04-2016 IPR005580 DbpA, RNA-binding domain VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 Pfam PF00270 DEAD/DEAH box helicase 28 194 2.4E-46 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 Pfam PF00271 Helicase conserved C-terminal domain 232 338 2.4E-27 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 Gene3D G3DSA:3.40.50.300 3 209 4.1E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 PANTHER PTHR24031:SF180 4 444 2.8E-264 T 22-04-2016 VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 SMART SM00490 257 338 4.7E-30 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS11930 a80d8e42542ee12d80078839af34270f 460 SMART SM00487 23 220 1.7E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS12695 08293dd862a824b3425a52224686d5d7 403 SUPERFAMILY SSF53067 2 144 3.17E-41 T 22-04-2016 VCLMA_RS12695 08293dd862a824b3425a52224686d5d7 403 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 402 2.8E-125 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VCLMA_RS12695 08293dd862a824b3425a52224686d5d7 403 Pfam PF12693 GspL periplasmic domain 246 402 1.8E-51 T 22-04-2016 IPR025691 GspL periplasmic domain VCLMA_RS12695 08293dd862a824b3425a52224686d5d7 403 Pfam PF05134 Type II secretion system (T2SS), protein L 5 240 7.4E-86 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VCLMA_RS12695 08293dd862a824b3425a52224686d5d7 403 SUPERFAMILY SSF53067 146 239 7.12E-22 T 22-04-2016 VCLMA_RS12695 08293dd862a824b3425a52224686d5d7 403 PIRSF PIRSF015761 4 403 2.0E-37 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VCLMA_RS08455 7378bff9d240fffd5103e9b7010d81da 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.1E-177 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 VCLMA_RS08455 7378bff9d240fffd5103e9b7010d81da 528 PANTHER PTHR30365 1 310 3.0E-278 T 22-04-2016 VCLMA_RS08455 7378bff9d240fffd5103e9b7010d81da 528 PANTHER PTHR30365 376 520 3.0E-278 T 22-04-2016 VCLMA_RS08455 7378bff9d240fffd5103e9b7010d81da 528 PANTHER PTHR30365:SF0 1 310 3.0E-278 T 22-04-2016 VCLMA_RS08455 7378bff9d240fffd5103e9b7010d81da 528 PANTHER PTHR30365:SF0 376 520 3.0E-278 T 22-04-2016 VCLMA_RS07760 12e9d85861aba7fffea24f964d7bb07b 235 Pfam PF00849 RNA pseudouridylate synthase 10 153 3.0E-25 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS07760 12e9d85861aba7fffea24f964d7bb07b 235 PANTHER PTHR11079:SF62 3 218 5.6E-139 T 22-04-2016 VCLMA_RS07760 12e9d85861aba7fffea24f964d7bb07b 235 SUPERFAMILY SSF55120 2 196 7.04E-46 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS07760 12e9d85861aba7fffea24f964d7bb07b 235 PANTHER PTHR11079 3 218 5.6E-139 T 22-04-2016 VCLMA_RS07760 12e9d85861aba7fffea24f964d7bb07b 235 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.3E-121 T 22-04-2016 IPR006508 Pseudouridine synthase, RluA-like KEGG: 00627+5.4.99.- VCLMA_RS07760 12e9d85861aba7fffea24f964d7bb07b 235 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 333 36.858 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 SUPERFAMILY SSF55347 154 307 4.84E-48 T 22-04-2016 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 167 310 5.0E-13 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 Gene3D G3DSA:3.40.50.720 1 162 7.4E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 Gene3D G3DSA:3.30.360.10 163 307 5.2E-48 T 22-04-2016 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 SUPERFAMILY SSF51735 1 168 7.56E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 332 2.5E-119 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 PANTHER PTHR32338:SF8 1 332 1.7E-151 T 22-04-2016 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 1.2E-32 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 SMART SM00859 3 146 6.5E-46 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VCLMA_RS12320 d3a0a70a0a0ea02ca1d30ad6b2f520cf 333 PANTHER PTHR32338 1 332 1.7E-151 T 22-04-2016 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 SUPERFAMILY SSF52540 621 909 2.1E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 SUPERFAMILY SSF52540 429 568 9.69E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 SUPERFAMILY SSF52540 4 204 9.69E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:1.10.8.280 285 405 3.9E-46 T 22-04-2016 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:3.40.50.300 2 51 5.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:3.40.50.300 477 595 5.7E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:3.40.50.300 820 937 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:3.40.50.300 600 691 1.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Pfam PF00005 ABC transporter 622 859 5.1E-10 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:1.20.1580.10 91 129 4.1E-55 T 22-04-2016 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:1.20.1580.10 406 476 4.1E-55 T 22-04-2016 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:1.20.1580.10 250 283 4.1E-55 T 22-04-2016 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:3.30.1490.20 200 248 3.1E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:3.30.1490.20 130 153 3.1E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 924 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 23.052 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 Gene3D G3DSA:1.20.1580.10 693 819 9.9E-55 T 22-04-2016 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 PANTHER PTHR32282 1 940 0.0 T 22-04-2016 VCLMA_RS01990 4aa996c956235777a8e4b7df13b1b162 940 PANTHER PTHR32282:SF2 1 940 0.0 T 22-04-2016 VCLMA_RS04845 2b77e6d3121810a0506ba60e4e0ef0fb 253 PANTHER PTHR21234:SF22 1 253 1.1E-184 T 22-04-2016 VCLMA_RS04845 2b77e6d3121810a0506ba60e4e0ef0fb 253 PANTHER PTHR21234 1 253 1.1E-184 T 22-04-2016 IPR018017 Nucleoside phosphorylase VCLMA_RS04845 2b77e6d3121810a0506ba60e4e0ef0fb 253 Gene3D G3DSA:3.40.50.1580 3 251 7.8E-85 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VCLMA_RS04845 2b77e6d3121810a0506ba60e4e0ef0fb 253 SUPERFAMILY SSF53167 6 249 2.88E-72 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VCLMA_RS04845 2b77e6d3121810a0506ba60e4e0ef0fb 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 2.1E-111 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 VCLMA_RS04845 2b77e6d3121810a0506ba60e4e0ef0fb 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VCLMA_RS04845 2b77e6d3121810a0506ba60e4e0ef0fb 253 Pfam PF01048 Phosphorylase superfamily 20 251 1.9E-39 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VCLMA_RS10580 f5ce3634e8660efd89013d822547a013 430 PIRSF PIRSF005353 1 430 5.8E-188 T 22-04-2016 IPR026033 Purine permease PbuG-like VCLMA_RS10580 f5ce3634e8660efd89013d822547a013 430 PANTHER PTHR11119:SF9 1 418 3.5E-171 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 VCLMA_RS10580 f5ce3634e8660efd89013d822547a013 430 PANTHER PTHR11119 1 418 3.5E-171 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VCLMA_RS10580 f5ce3634e8660efd89013d822547a013 430 Pfam PF00860 Permease family 17 391 5.6E-56 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 1.8E-63 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 Gene3D G3DSA:3.90.226.10 58 274 5.5E-49 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 SUPERFAMILY SSF52096 5 318 1.83E-103 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.9E-163 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 PANTHER PTHR22855 1 317 7.3E-130 T 22-04-2016 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.651 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 1.96E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 1.96E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 1.96E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 1.96E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 1.96E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS10415 c759fbf3954d5c4539403b113f21a126 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 1.96E-48 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 VCLMA_RS04930 013c8245ebcfdb006a57cfa966104b38 363 Gene3D G3DSA:3.40.50.2300 22 153 2.7E-36 T 22-04-2016 VCLMA_RS04930 013c8245ebcfdb006a57cfa966104b38 363 PANTHER PTHR26402 20 136 3.9E-38 T 22-04-2016 VCLMA_RS04930 013c8245ebcfdb006a57cfa966104b38 363 Pfam PF00072 Response regulator receiver domain 22 132 4.1E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS04930 013c8245ebcfdb006a57cfa966104b38 363 SUPERFAMILY SSF52172 22 144 1.31E-35 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS04930 013c8245ebcfdb006a57cfa966104b38 363 SMART SM00448 20 132 1.2E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS11090 8931d7589222d38f1d1f2a6166f6bd1c 157 Pfam PF05258 Protein of unknown function (DUF721) 11 89 6.3E-12 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 VCLMA_RS01305 ba38f39fb61381c3389602eeabc84b8e 352 Gene3D G3DSA:3.10.580.10 180 315 7.0E-16 T 22-04-2016 VCLMA_RS01305 ba38f39fb61381c3389602eeabc84b8e 352 Pfam PF01595 Domain of unknown function DUF21 9 177 2.9E-28 T 22-04-2016 IPR002550 Domain of unknown function DUF21 VCLMA_RS01305 ba38f39fb61381c3389602eeabc84b8e 352 SUPERFAMILY SSF54631 180 315 5.36E-26 T 22-04-2016 VCLMA_RS01305 ba38f39fb61381c3389602eeabc84b8e 352 Pfam PF00571 CBS domain 260 313 2.7E-6 T 22-04-2016 IPR000644 CBS domain VCLMA_RS01305 ba38f39fb61381c3389602eeabc84b8e 352 PANTHER PTHR22777 1 336 1.7E-199 T 22-04-2016 VCLMA_RS01305 ba38f39fb61381c3389602eeabc84b8e 352 PANTHER PTHR22777:SF4 1 336 1.7E-199 T 22-04-2016 VCLMA_RS11095 08c1a36bce787b0d2bd4054abcc661c8 305 SUPERFAMILY SSF54211 3 126 2.28E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS11095 08c1a36bce787b0d2bd4054abcc661c8 305 SUPERFAMILY SSF54211 134 278 3.53E-52 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS11095 08c1a36bce787b0d2bd4054abcc661c8 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 49.343 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VCLMA_RS11095 08c1a36bce787b0d2bd4054abcc661c8 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 9.3E-108 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VCLMA_RS11095 08c1a36bce787b0d2bd4054abcc661c8 305 Gene3D G3DSA:3.30.230.20 3 126 5.0E-47 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VCLMA_RS11095 08c1a36bce787b0d2bd4054abcc661c8 305 PANTHER PTHR33694 1 305 1.2E-141 T 22-04-2016 VCLMA_RS11095 08c1a36bce787b0d2bd4054abcc661c8 305 PANTHER PTHR33694:SF1 1 305 1.2E-141 T 22-04-2016 VCLMA_RS11095 08c1a36bce787b0d2bd4054abcc661c8 305 Gene3D G3DSA:3.30.1700.10 129 283 1.4E-60 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VCLMA_RS11095 08c1a36bce787b0d2bd4054abcc661c8 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 298 1.2E-141 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 VCLMA_RS00515 ef26b1ab4c0cd396c0582e2d01b10f42 106 Pfam PF00581 Rhodanese-like domain 12 98 7.4E-14 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS00515 ef26b1ab4c0cd396c0582e2d01b10f42 106 SUPERFAMILY SSF52821 1 104 1.19E-28 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS00515 ef26b1ab4c0cd396c0582e2d01b10f42 106 Gene3D G3DSA:3.40.250.10 4 104 2.2E-28 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS00515 ef26b1ab4c0cd396c0582e2d01b10f42 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.453 T 22-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 VCLMA_RS00515 ef26b1ab4c0cd396c0582e2d01b10f42 106 SMART SM00450 7 102 6.1E-18 T 22-04-2016 IPR001763 Rhodanese-like domain VCLMA_RS00515 ef26b1ab4c0cd396c0582e2d01b10f42 106 PANTHER PTHR12231 23 104 3.4E-14 T 22-04-2016 VCLMA_RS10570 cb8e028bd7dcea85c7e265941bc0e5a2 415 Gene3D G3DSA:3.40.50.1820 347 388 2.3E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS10570 cb8e028bd7dcea85c7e265941bc0e5a2 415 Gene3D G3DSA:3.40.50.1820 157 300 2.3E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS10570 cb8e028bd7dcea85c7e265941bc0e5a2 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 56.164 T 22-04-2016 IPR010520 UPF0255 family VCLMA_RS10570 cb8e028bd7dcea85c7e265941bc0e5a2 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 5 414 1.1E-234 T 22-04-2016 IPR010520 UPF0255 family VCLMA_RS10570 cb8e028bd7dcea85c7e265941bc0e5a2 415 SUPERFAMILY SSF53474 47 411 8.11E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS04440 01e8920874dc574795fa4d49ac9ac677 638 SUPERFAMILY SSF56519 57 253 4.05E-57 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VCLMA_RS04440 01e8920874dc574795fa4d49ac9ac677 638 Gene3D G3DSA:3.40.710.10 255 624 2.3E-103 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS04440 01e8920874dc574795fa4d49ac9ac677 638 SUPERFAMILY SSF56601 255 619 2.33E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS04440 01e8920874dc574795fa4d49ac9ac677 638 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 619 1.2E-238 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 VCLMA_RS04440 01e8920874dc574795fa4d49ac9ac677 638 PANTHER PTHR30627:SF2 6 638 1.9E-280 T 22-04-2016 VCLMA_RS04440 01e8920874dc574795fa4d49ac9ac677 638 PANTHER PTHR30627 6 638 1.9E-280 T 22-04-2016 VCLMA_RS04440 01e8920874dc574795fa4d49ac9ac677 638 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 5.7E-73 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VCLMA_RS04440 01e8920874dc574795fa4d49ac9ac677 638 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 6.1E-50 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VCLMA_RS04440 01e8920874dc574795fa4d49ac9ac677 638 Gene3D G3DSA:3.90.1310.10 132 253 8.9E-41 T 22-04-2016 VCLMA_RS01290 02430763ab04525f9e343ccba9bda861 195 Gene3D G3DSA:1.20.1590.10 1 195 5.0E-85 T 22-04-2016 IPR023381 YP001051499.1-like domain VCLMA_RS01290 02430763ab04525f9e343ccba9bda861 195 Pfam PF04222 Protein of unknown function (DUF416) 6 194 8.9E-77 T 22-04-2016 IPR007338 Protein of unknown function DUF416 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 SMART SM01004 9 333 3.5E-245 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 3.9E-142 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 Gene3D G3DSA:3.20.20.70 7 336 2.8E-154 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 PANTHER PTHR11458 9 343 1.2E-190 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 5.5E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 SUPERFAMILY SSF51569 7 335 3.66E-145 T 22-04-2016 VCLMA_RS00530 50b04689791aa6b64928f734a5fbba42 347 PIRSF PIRSF001415 2 336 3.4E-152 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 PANTHER PTHR12815:SF11 5 675 1.5E-294 T 22-04-2016 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 PANTHER PTHR12815:SF11 691 803 1.5E-294 T 22-04-2016 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 Gene3D G3DSA:2.40.160.50 404 802 8.9E-19 T 22-04-2016 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF01103 Surface antigen 448 803 1.2E-90 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 803 25.766 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 PANTHER PTHR12815 5 675 1.5E-294 T 22-04-2016 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 PANTHER PTHR12815 691 803 1.5E-294 T 22-04-2016 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 PIRSF PIRSF006076 1 803 1.4E-244 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF07244 Surface antigen variable number repeat 347 420 7.5E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF07244 Surface antigen variable number repeat 266 344 2.8E-10 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF07244 Surface antigen variable number repeat 176 263 1.0E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 Pfam PF07244 Surface antigen variable number repeat 92 172 2.8E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VCLMA_RS10455 45d60711d45dbee0dfdf94e6c299bafc 803 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 803 1.0E-281 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VCLMA_RS06555 cf69af19d4f38ac0768f0303565479d0 316 PANTHER PTHR30537 3 307 4.0E-92 T 22-04-2016 VCLMA_RS06555 cf69af19d4f38ac0768f0303565479d0 316 Gene3D G3DSA:3.40.190.10 100 174 9.5E-5 T 22-04-2016 VCLMA_RS06555 cf69af19d4f38ac0768f0303565479d0 316 Gene3D G3DSA:1.10.10.10 12 97 9.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS06555 cf69af19d4f38ac0768f0303565479d0 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 6.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS06555 cf69af19d4f38ac0768f0303565479d0 316 Pfam PF03466 LysR substrate binding domain 100 305 8.5E-40 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS06555 cf69af19d4f38ac0768f0303565479d0 316 Gene3D G3DSA:3.40.190.10 175 273 1.6E-17 T 22-04-2016 VCLMA_RS06555 cf69af19d4f38ac0768f0303565479d0 316 SUPERFAMILY SSF46785 10 119 4.68E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS06555 cf69af19d4f38ac0768f0303565479d0 316 SUPERFAMILY SSF53850 100 308 5.07E-38 T 22-04-2016 VCLMA_RS06555 cf69af19d4f38ac0768f0303565479d0 316 PANTHER PTHR30537:SF5 3 307 4.0E-92 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 292 312 5.4E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 432 449 5.4E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 326 343 5.4E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 526 539 5.4E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 517 5.4E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 355 376 5.4E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 728 744 5.4E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PRINTS PR00738 Glycosyl hydrolase family 20 signature 746 763 5.4E-48 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PANTHER PTHR22600:SF12 567 774 4.2E-304 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PANTHER PTHR22600:SF12 151 392 4.2E-304 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PANTHER PTHR22600:SF12 792 882 4.2E-304 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PANTHER PTHR22600:SF12 415 538 4.2E-304 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PANTHER PTHR22600 567 774 4.2E-304 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PANTHER PTHR22600 151 392 4.2E-304 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PANTHER PTHR22600 792 882 4.2E-304 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 PANTHER PTHR22600 415 538 4.2E-304 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 Gene3D G3DSA:2.60.40.320 833 881 1.3E-29 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 Gene3D G3DSA:3.30.379.10 206 329 1.2E-27 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 SUPERFAMILY SSF51445 332 772 6.32E-143 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 SUPERFAMILY SSF81296 780 881 4.62E-39 T 22-04-2016 IPR014756 Immunoglobulin E-set VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 332 764 1.9E-109 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 211 329 1.1E-16 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 Pfam PF03173 Putative carbohydrate binding domain 35 193 4.6E-62 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 SUPERFAMILY SSF55545 208 331 1.83E-25 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 SUPERFAMILY SSF49384 26 198 4.18E-66 T 22-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 Gene3D G3DSA:2.60.40.290 26 167 3.9E-61 T 22-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 804 879 3.2E-30 T 22-04-2016 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 SMART SM01081 34 195 3.0E-90 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 VCLMA_RS10295 4baf44f93631bbb5ab477962fac5c085 883 Gene3D G3DSA:3.20.20.80 330 832 3.5E-158 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS01185 5c9d2d671f0fa5109fa0cc064b78e5e0 264 PANTHER PTHR30413:SF9 5 264 3.0E-134 T 22-04-2016 VCLMA_RS01185 5c9d2d671f0fa5109fa0cc064b78e5e0 264 PANTHER PTHR30413 5 264 3.0E-134 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 VCLMA_RS01185 5c9d2d671f0fa5109fa0cc064b78e5e0 264 Pfam PF01061 ABC-2 type transporter 29 224 8.5E-12 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 VCLMA_RS04315 ae3b5c313918d26fd1f0ab0d2e51cf94 193 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 42 178 1.6E-9 T 22-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 364 1.1E-45 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 Gene3D G3DSA:3.30.70.270 208 368 2.2E-52 T 22-04-2016 VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 SUPERFAMILY SSF55073 211 368 1.65E-48 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 SUPERFAMILY SSF47188 1 131 5.49E-27 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 PANTHER PTHR10799:SF750 239 365 1.7E-28 T 22-04-2016 VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 PANTHER PTHR10799:SF750 25 154 1.7E-28 T 22-04-2016 VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 Gene3D G3DSA:1.20.120.50 1 131 1.8E-29 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 1.1E-29 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 366 8.9E-52 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 Pfam PF01814 Hemerythrin HHE cation binding domain 13 128 2.3E-8 T 22-04-2016 IPR012312 Haemerythrin-like VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 SMART SM00267 195 368 1.3E-58 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 PANTHER PTHR10799 239 365 1.7E-28 T 22-04-2016 VCLMA_RS05750 ac5795447c62f7179f60520873a633e4 372 PANTHER PTHR10799 25 154 1.7E-28 T 22-04-2016 VCLMA_RS10655 23172cedd88fc53dcc3adf6afb7685b7 415 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 9.7E-201 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VCLMA_RS10655 23172cedd88fc53dcc3adf6afb7685b7 415 PANTHER PTHR30578:SF1 3 414 1.3E-263 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VCLMA_RS10655 23172cedd88fc53dcc3adf6afb7685b7 415 PANTHER PTHR30578 3 414 1.3E-263 T 22-04-2016 VCLMA_RS10655 23172cedd88fc53dcc3adf6afb7685b7 415 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.526 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VCLMA_RS10655 23172cedd88fc53dcc3adf6afb7685b7 415 Pfam PF03116 NQR2, RnfD, RnfE family 41 406 3.3E-108 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 VCLMA_RS10655 23172cedd88fc53dcc3adf6afb7685b7 415 PIRSF PIRSF016055 1 414 3.2E-201 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VCLMA_RS05250 a882a6abe34eb4235710871c0721bb19 287 Gene3D G3DSA:3.30.2010.10 74 160 1.9E-32 T 22-04-2016 VCLMA_RS05250 a882a6abe34eb4235710871c0721bb19 287 PANTHER PTHR10120 1 285 5.6E-102 T 22-04-2016 VCLMA_RS05250 a882a6abe34eb4235710871c0721bb19 287 Hamap MF_00188 Protease HtpX [htpX]. 1 287 25.392 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VCLMA_RS05250 a882a6abe34eb4235710871c0721bb19 287 PANTHER PTHR10120:SF19 1 285 5.6E-102 T 22-04-2016 VCLMA_RS05250 a882a6abe34eb4235710871c0721bb19 287 Pfam PF01435 Peptidase family M48 79 286 9.2E-40 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VCLMA_RS08360 0661d8cd6179bfb04963e29700a337fd 99 Gene3D G3DSA:3.40.50.2300 1 94 1.1E-37 T 22-04-2016 VCLMA_RS08360 0661d8cd6179bfb04963e29700a337fd 99 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 87 4.4E-31 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 VCLMA_RS08360 0661d8cd6179bfb04963e29700a337fd 99 PANTHER PTHR30505 1 94 3.6E-35 T 22-04-2016 VCLMA_RS08360 0661d8cd6179bfb04963e29700a337fd 99 SUPERFAMILY SSF52794 2 94 1.05E-32 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS08360 0661d8cd6179bfb04963e29700a337fd 99 PANTHER PTHR30505:SF0 1 94 3.6E-35 T 22-04-2016 VCLMA_RS08360 0661d8cd6179bfb04963e29700a337fd 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 4.3E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS12215 cb81e2b9ea54b561ded1eb92f98fc941 251 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 245 8.3E-10 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS12215 cb81e2b9ea54b561ded1eb92f98fc941 251 Gene3D G3DSA:3.40.190.10 25 109 7.0E-11 T 22-04-2016 VCLMA_RS12215 cb81e2b9ea54b561ded1eb92f98fc941 251 Gene3D G3DSA:3.40.190.10 200 244 7.0E-11 T 22-04-2016 VCLMA_RS12215 cb81e2b9ea54b561ded1eb92f98fc941 251 SUPERFAMILY SSF53850 18 246 1.74E-22 T 22-04-2016 VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 Pfam PF03958 Bacterial type II/III secretion system short domain 255 320 1.3E-11 T 22-04-2016 IPR005644 NolW-like VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 SMART SM00965 181 229 1.6E-9 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 320 330 4.5E-20 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 407 431 4.5E-20 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 557 571 4.5E-20 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 442 452 4.5E-20 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 PRINTS PR00811 Bacterial general secretion pathway protein D signature 534 552 4.5E-20 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 515 548 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 156 569 4.0E-160 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 PANTHER PTHR30604 5 571 2.1E-144 T 22-04-2016 VCLMA_RS12255 46dbec629d9e338e3cc09dfbde2b2117 571 Pfam PF00263 Bacterial type II and III secretion system protein 411 569 1.1E-45 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VCLMA_RS08080 1cced617d51ed20dfa8a77ff3d5d4340 233 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 108 226 2.5E-32 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 VCLMA_RS08080 1cced617d51ed20dfa8a77ff3d5d4340 233 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 233 37.524 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VCLMA_RS08080 1cced617d51ed20dfa8a77ff3d5d4340 233 PANTHER PTHR21367:SF0 7 232 5.2E-78 T 22-04-2016 VCLMA_RS08080 1cced617d51ed20dfa8a77ff3d5d4340 233 PIRSF PIRSF037208 1 233 6.0E-82 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic VCLMA_RS08080 1cced617d51ed20dfa8a77ff3d5d4340 233 SUPERFAMILY SSF55729 81 231 1.45E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS08080 1cced617d51ed20dfa8a77ff3d5d4340 233 PANTHER PTHR21367 7 232 5.2E-78 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase VCLMA_RS08080 1cced617d51ed20dfa8a77ff3d5d4340 233 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 5.7E-18 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 VCLMA_RS00920 fb140adb9b45610480d08e0c7db09315 222 PIRSF PIRSF006324 1 213 2.2E-60 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS00920 fb140adb9b45610480d08e0c7db09315 222 PANTHER PTHR30086 2 216 1.9E-119 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS00920 fb140adb9b45610480d08e0c7db09315 222 Pfam PF01810 LysE type translocator 16 208 1.0E-39 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS00920 fb140adb9b45610480d08e0c7db09315 222 PANTHER PTHR30086:SF13 2 216 1.9E-119 T 22-04-2016 VCLMA_RS09275 2a0b47d152825b4710cf77eefd3d7935 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 6 336 3.0E-100 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VCLMA_RS09275 2a0b47d152825b4710cf77eefd3d7935 338 Pfam PF02618 YceG-like family 43 328 3.0E-86 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like VCLMA_RS09275 2a0b47d152825b4710cf77eefd3d7935 338 Gene3D G3DSA:3.30.160.60 72 110 6.8E-21 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VCLMA_RS09275 2a0b47d152825b4710cf77eefd3d7935 338 PANTHER PTHR30518:SF2 1 338 2.7E-94 T 22-04-2016 VCLMA_RS09275 2a0b47d152825b4710cf77eefd3d7935 338 PANTHER PTHR30518 1 338 2.7E-94 T 22-04-2016 VCLMA_RS09275 2a0b47d152825b4710cf77eefd3d7935 338 Gene3D G3DSA:3.30.160.60 302 337 3.0E-19 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 VCLMA_RS04710 626cd15d68b539773aab3f0f77a7444b 224 SUPERFAMILY SSF53098 10 208 1.95E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS04710 626cd15d68b539773aab3f0f77a7444b 224 SMART SM00479 18 204 1.9E-32 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS04710 626cd15d68b539773aab3f0f77a7444b 224 PANTHER PTHR30231 8 215 2.1E-115 T 22-04-2016 VCLMA_RS04710 626cd15d68b539773aab3f0f77a7444b 224 Pfam PF00929 Exonuclease 20 195 2.8E-42 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS04710 626cd15d68b539773aab3f0f77a7444b 224 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 209 1.6E-98 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VCLMA_RS04710 626cd15d68b539773aab3f0f77a7444b 224 Gene3D G3DSA:3.30.420.10 10 210 1.3E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS04710 626cd15d68b539773aab3f0f77a7444b 224 PANTHER PTHR30231:SF2 8 215 2.1E-115 T 22-04-2016 VCLMA_RS04710 626cd15d68b539773aab3f0f77a7444b 224 Hamap MF_00157 Ribonuclease T [rnt]. 1 224 118.308 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 Pfam PF11842 Domain of unknown function (DUF3362) 585 725 3.7E-42 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 6.4E-259 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 SUPERFAMILY SSF102114 368 431 1.31E-9 T 22-04-2016 VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 SUPERFAMILY SSF102114 461 605 1.31E-9 T 22-04-2016 VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 PANTHER PTHR32331 3 716 0.0 T 22-04-2016 VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 23 741 47.694 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 Pfam PF04055 Radical SAM superfamily 371 576 4.7E-21 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 Pfam PF08497 Radical SAM N-terminal 24 370 7.8E-142 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 PANTHER PTHR32331:SF3 3 716 0.0 T 22-04-2016 VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 Gene3D G3DSA:3.80.30.20 365 606 2.3E-46 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VCLMA_RS07970 88bb7bf3f1537edad0ea09c054b5c6b3 741 SMART SM00729 367 617 4.1E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Gene3D G3DSA:2.150.10.10 4177 4250 6.2E-4 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Gene3D G3DSA:2.150.10.10 4251 4451 2.2E-17 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Gene3D G3DSA:2.150.10.10 3823 3832 6.2E-4 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 SUPERFAMILY SSF53474 3177 3292 1.62E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF16671 Actin cross-linking domain 1973 2358 1.3E-239 T 22-04-2016 IPR032074 Actin cross-linking domain GO:0090527 VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF11647 C-terminal region of Pasteurella multocida toxin residues 569-1285 2564 2633 6.1E-25 T 22-04-2016 IPR020972 Dermonecrotic/RTX toxin C-terminal VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 SUPERFAMILY SSF158842 2548 2791 8.76E-57 T 22-04-2016 VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 PANTHER PTHR12277 3179 3291 1.1E-27 T 22-04-2016 VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 950 965 0.13 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 581 598 0.95 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1293 1310 0.007 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 275 291 0.49 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 207 224 0.49 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 161 184 7.7E-4 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1239 1253 36.0 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1312 1329 1.1 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 779 795 0.16 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 912 929 0.6 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1107 1119 5.7 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 969 981 6.7 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1084 1099 0.24 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1198 1214 0.014 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1160 1176 1.3 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 855 872 0.44 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1141 1156 0.48 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 874 888 0.18 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 988 1003 0.04 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 101 118 0.33 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1181 1196 0.024 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1217 1233 3.1 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 621 638 0.043 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 931 947 8.6 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 738 750 26.0 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 121 138 0.012 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 836 852 0.2 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 601 617 7.4 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 641 655 3.5 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 187 204 0.3 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 817 832 0.26 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1122 1139 2.1 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1028 1040 0.36 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 255 272 3.1 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 1064 1076 5.0 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 798 813 0.047 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 141 157 0.014 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 756 768 6.9 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF07634 RtxA repeat 893 907 3.6 T 22-04-2016 IPR011509 RtxA toxin VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF12146 Serine aminopeptidase, S33 3181 3297 6.4E-10 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 SUPERFAMILY SSF51120 4267 4473 4.19E-15 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Gene3D G3DSA:1.20.1440.20 2583 2675 5.6E-4 T 22-04-2016 IPR023353 LemA-like domain VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Pfam PF11713 Peptidase C80 family 3456 3613 6.9E-53 T 22-04-2016 IPR020974 CGT/MARTX, cysteine protease (CPD) domain VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Gene3D G3DSA:3.40.50.1820 3149 3294 1.2E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS06840 0a1fe70d7f573c274eec7147db69f4d2 4545 Gene3D G3DSA:3.40.50.1820 4467 4484 1.2E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 668 681 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 662 3.8E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SMART SM00091 873 938 0.0036 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF55874 516 686 1.44E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF47384 446 527 3.14E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PANTHER PTHR24423:SF374 3 18 6.3E-146 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PANTHER PTHR24423:SF374 371 428 6.3E-146 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PANTHER PTHR24423:SF374 148 217 6.3E-146 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PANTHER PTHR24423:SF374 457 886 6.3E-146 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:3.30.565.10 513 687 1.4E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 574 683 8.2E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF55785 861 933 5.9E-7 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SMART SM00387 573 684 2.4E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Pfam PF00672 HAMP domain 358 427 1.9E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Pfam PF00072 Response regulator receiver domain 725 835 2.8E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF158472 378 428 7.98E-11 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PANTHER PTHR24423 3 18 6.3E-146 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PANTHER PTHR24423 371 428 6.3E-146 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PANTHER PTHR24423 148 217 6.3E-146 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 PANTHER PTHR24423 457 886 6.3E-146 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Pfam PF00512 His Kinase A (phospho-acceptor) domain 460 525 2.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SMART SM00304 377 430 4.8E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Pfam PF13188 PAS domain 879 914 6.6E-4 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:3.30.450.20 303 353 9.7E-5 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SUPERFAMILY SSF52172 717 846 1.57E-41 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:3.30.450.20 868 925 1.1E-7 T 22-04-2016 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SMART SM00448 722 835 9.9E-46 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:1.10.287.130 452 512 9.0E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 SMART SM00388 459 527 2.1E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS03025 5621f4da204970eb023027e4a26309a8 1129 Gene3D G3DSA:3.40.50.2300 721 843 1.1E-42 T 22-04-2016 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 SUPERFAMILY SSF51215 7 143 7.72E-18 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 SUPERFAMILY SSF46689 218 263 3.72E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 Pfam PF02311 AraC-like ligand binding domain 12 143 3.6E-27 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 PANTHER PTHR11019:SF94 1 263 7.5E-165 T 22-04-2016 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 Gene3D G3DSA:1.10.10.60 163 219 3.4E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 Gene3D G3DSA:1.10.10.60 220 261 4.7E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 SUPERFAMILY SSF46689 168 216 2.37E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 SMART SM00342 182 264 6.4E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 Gene3D G3DSA:2.60.120.280 22 131 2.5E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 Pfam PF12833 Helix-turn-helix domain 188 261 2.7E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS00925 df9a7d3636f1511ec9221999a9a4a9fa 267 PANTHER PTHR11019 1 263 7.5E-165 T 22-04-2016 VCLMA_RS10845 8506dc39a5a1a52bb36ac340466abf11 561 PANTHER PTHR24096 1 557 8.2E-281 T 22-04-2016 VCLMA_RS10845 8506dc39a5a1a52bb36ac340466abf11 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 22-04-2016 IPR020845 AMP-binding, conserved site VCLMA_RS10845 8506dc39a5a1a52bb36ac340466abf11 561 Gene3D G3DSA:3.40.50.980 189 368 1.9E-27 T 22-04-2016 VCLMA_RS10845 8506dc39a5a1a52bb36ac340466abf11 561 PANTHER PTHR24096:SF249 1 557 8.2E-281 T 22-04-2016 VCLMA_RS10845 8506dc39a5a1a52bb36ac340466abf11 561 Pfam PF00501 AMP-binding enzyme 23 440 1.3E-86 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS10845 8506dc39a5a1a52bb36ac340466abf11 561 Gene3D G3DSA:2.30.38.10 377 434 1.3E-17 T 22-04-2016 VCLMA_RS10845 8506dc39a5a1a52bb36ac340466abf11 561 Gene3D G3DSA:3.40.50.980 19 188 5.2E-29 T 22-04-2016 VCLMA_RS10845 8506dc39a5a1a52bb36ac340466abf11 561 SUPERFAMILY SSF56801 15 547 9.68E-109 T 22-04-2016 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 417 2.8E-21 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 Pfam PF08245 Mur ligase middle domain 127 307 5.2E-30 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 SUPERFAMILY SSF53623 108 323 3.92E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.646 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 1.7E-29 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 1.3E-191 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 PANTHER PTHR23135:SF5 17 467 4.2E-233 T 22-04-2016 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 SUPERFAMILY SSF53244 326 474 6.78E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 Gene3D G3DSA:3.40.1190.10 111 328 3.5E-84 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 Gene3D G3DSA:3.90.190.20 329 475 3.2E-57 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 PANTHER PTHR23135 17 467 4.2E-233 T 22-04-2016 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 SUPERFAMILY SSF51984 23 109 4.84E-28 T 22-04-2016 VCLMA_RS11115 a43f78f90ca2b681236436ebe5b884bf 486 Gene3D G3DSA:3.40.50.720 24 110 3.9E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 145 430 5.5E-139 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 SUPERFAMILY SSF51604 144 428 4.53E-128 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 Gene3D G3DSA:3.30.390.10 3 127 2.1E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 SMART SM01193 4 134 1.2E-92 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 Gene3D G3DSA:3.20.20.120 128 429 8.2E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 PANTHER PTHR11902 1 428 3.1E-273 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 Hamap MF_00318 Enolase [eno]. 2 417 44.622 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 7.3E-208 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 SMART SM01192 143 431 5.8E-213 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 Pfam PF03952 Enolase, N-terminal domain 4 134 4.2E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 SUPERFAMILY SSF54826 3 138 1.77E-56 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VCLMA_RS11335 74e91686f9ccb8b24a9e4edd25ba05cb 433 PIRSF PIRSF001400 1 431 4.2E-193 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09465 15d6facefd2c8a2d098911eae83d05a5 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 7.9E-16 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VCLMA_RS09465 15d6facefd2c8a2d098911eae83d05a5 68 PANTHER PTHR37531:SF1 1 68 2.2E-28 T 22-04-2016 VCLMA_RS09465 15d6facefd2c8a2d098911eae83d05a5 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 56 2.9E-16 T 22-04-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VCLMA_RS09465 15d6facefd2c8a2d098911eae83d05a5 68 PANTHER PTHR37531 1 68 2.2E-28 T 22-04-2016 VCLMA_RS06200 f940903d6bf652b3fbcb31a9b7b2dcdc 543 PANTHER PTHR32089:SF64 180 543 1.5E-123 T 22-04-2016 VCLMA_RS06200 f940903d6bf652b3fbcb31a9b7b2dcdc 543 Pfam PF00672 HAMP domain 193 262 1.3E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06200 f940903d6bf652b3fbcb31a9b7b2dcdc 543 SMART SM00283 280 541 2.5E-72 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06200 f940903d6bf652b3fbcb31a9b7b2dcdc 543 SMART SM00304 211 265 4.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06200 f940903d6bf652b3fbcb31a9b7b2dcdc 543 PANTHER PTHR32089 180 543 1.5E-123 T 22-04-2016 VCLMA_RS06200 f940903d6bf652b3fbcb31a9b7b2dcdc 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 540 5.5E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06200 f940903d6bf652b3fbcb31a9b7b2dcdc 543 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 165 5.4E-18 T 22-04-2016 IPR024478 4HB MCP domain VCLMA_RS06200 f940903d6bf652b3fbcb31a9b7b2dcdc 543 Gene3D G3DSA:1.10.287.950 295 512 8.4E-53 T 22-04-2016 VCLMA_RS06200 f940903d6bf652b3fbcb31a9b7b2dcdc 543 SUPERFAMILY SSF58104 235 542 9.02E-73 T 22-04-2016 VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 PANTHER PTHR11373 1 191 3.3E-53 T 22-04-2016 VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 Gene3D G3DSA:1.10.3410.10 251 354 8.0E-27 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.59 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 Gene3D G3DSA:1.10.3210.10 4 250 7.4E-68 T 22-04-2016 IPR006674 HD domain VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 SUPERFAMILY SSF109604 232 437 9.42E-80 T 22-04-2016 VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 SUPERFAMILY SSF109604 23 167 9.42E-80 T 22-04-2016 VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 Pfam PF01966 HD domain 62 143 5.6E-7 T 22-04-2016 IPR006674 HD domain VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 Gene3D G3DSA:1.10.3550.10 355 432 2.6E-5 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 1.1E-142 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 Pfam PF13286 Phosphohydrolase-associated domain 343 433 1.3E-28 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain VCLMA_RS09090 6130c1497c603d43c113a4dc4f30cf0b 441 SMART SM00471 58 264 7.1E-8 T 22-04-2016 IPR003607 HD/PDEase domain VCLMA_RS07560 58b01b1f272e55b90b4fd5dcfbb882c4 382 PANTHER PTHR30341 1 381 1.0E-200 T 22-04-2016 VCLMA_RS07560 58b01b1f272e55b90b4fd5dcfbb882c4 382 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 3.3E-190 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VCLMA_RS07560 58b01b1f272e55b90b4fd5dcfbb882c4 382 PANTHER PTHR30341:SF0 1 381 1.0E-200 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VCLMA_RS07560 58b01b1f272e55b90b4fd5dcfbb882c4 382 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 381 23.556 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VCLMA_RS07560 58b01b1f272e55b90b4fd5dcfbb882c4 382 Gene3D G3DSA:1.20.1530.10 4 377 4.6E-151 T 22-04-2016 IPR023171 Na/H antiporter domain VCLMA_RS07560 58b01b1f272e55b90b4fd5dcfbb882c4 382 Pfam PF06965 Na+/H+ antiporter 1 7 373 2.6E-144 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VCLMA_RS12245 eeb9fae753c1a051e44f5c2c866850b9 361 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 353 3.9E-121 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS12245 eeb9fae753c1a051e44f5c2c866850b9 361 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 43.33 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS12245 eeb9fae753c1a051e44f5c2c866850b9 361 Gene3D G3DSA:3.40.50.1970 2 171 8.1E-68 T 22-04-2016 VCLMA_RS12245 eeb9fae753c1a051e44f5c2c866850b9 361 PANTHER PTHR21090 1 359 3.7E-207 T 22-04-2016 VCLMA_RS12245 eeb9fae753c1a051e44f5c2c866850b9 361 PIRSF PIRSF001455 17 359 7.0E-108 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS12245 eeb9fae753c1a051e44f5c2c866850b9 361 Pfam PF01761 3-dehydroquinate synthase 67 324 7.4E-114 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS12245 eeb9fae753c1a051e44f5c2c866850b9 361 SUPERFAMILY SSF56796 4 356 2.22E-119 T 22-04-2016 VCLMA_RS12245 eeb9fae753c1a051e44f5c2c866850b9 361 Gene3D G3DSA:1.20.1090.10 172 355 2.2E-69 T 22-04-2016 VCLMA_RS03880 00224d04ca93e7e2f17c0415cf9588cc 509 PANTHER PTHR40596 1 508 0.0 T 22-04-2016 VCLMA_RS03880 00224d04ca93e7e2f17c0415cf9588cc 509 SUPERFAMILY SSF100950 4 237 3.87E-76 T 22-04-2016 VCLMA_RS03880 00224d04ca93e7e2f17c0415cf9588cc 509 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 42 506 1.8E-268 T 22-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VCLMA_RS03880 00224d04ca93e7e2f17c0415cf9588cc 509 SUPERFAMILY SSF100950 240 506 6.98E-63 T 22-04-2016 VCLMA_RS03880 00224d04ca93e7e2f17c0415cf9588cc 509 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 36 507 1.3E-236 T 22-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VCLMA_RS03880 00224d04ca93e7e2f17c0415cf9588cc 509 PIRSF PIRSF009451 1 508 7.6E-269 T 22-04-2016 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 VCLMA_RS03880 00224d04ca93e7e2f17c0415cf9588cc 509 Gene3D G3DSA:3.40.810.20 240 481 1.6E-78 T 22-04-2016 VCLMA_RS03880 00224d04ca93e7e2f17c0415cf9588cc 509 Gene3D G3DSA:3.40.1080.10 3 237 1.2E-104 T 22-04-2016 VCLMA_RS09110 57bb426105e1daec0e75b9910029e263 188 PANTHER PTHR24096 1 176 4.5E-70 T 22-04-2016 VCLMA_RS09110 57bb426105e1daec0e75b9910029e263 188 Pfam PF00501 AMP-binding enzyme 2 83 2.6E-31 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS09110 57bb426105e1daec0e75b9910029e263 188 Gene3D G3DSA:2.30.38.10 2 77 1.6E-30 T 22-04-2016 VCLMA_RS09110 57bb426105e1daec0e75b9910029e263 188 Gene3D G3DSA:3.30.300.30 78 175 2.3E-27 T 22-04-2016 VCLMA_RS09110 57bb426105e1daec0e75b9910029e263 188 Pfam PF13193 AMP-binding enzyme C-terminal domain 92 166 2.0E-17 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VCLMA_RS09110 57bb426105e1daec0e75b9910029e263 188 SUPERFAMILY SSF56801 2 175 2.49E-65 T 22-04-2016 VCLMA_RS08345 ad92858e63b8c39ae694c343692ab316 146 PANTHER PTHR30505:SF5 1 143 8.6E-39 T 22-04-2016 VCLMA_RS08345 ad92858e63b8c39ae694c343692ab316 146 Gene3D G3DSA:3.40.930.10 1 145 8.3E-37 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS08345 ad92858e63b8c39ae694c343692ab316 146 SUPERFAMILY SSF55804 1 145 4.45E-28 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VCLMA_RS08345 ad92858e63b8c39ae694c343692ab316 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 7.1E-30 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS08345 ad92858e63b8c39ae694c343692ab316 146 PANTHER PTHR30505 1 143 8.6E-39 T 22-04-2016 VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 SUPERFAMILY SSF102114 123 374 6.54E-62 T 22-04-2016 VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.9E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.844 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 Pfam PF04055 Radical SAM superfamily 151 325 1.4E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 SMART SM00729 147 367 1.8E-64 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 PANTHER PTHR11918 1 474 1.2E-237 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 439 5.9E-199 T 22-04-2016 VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 Gene3D G3DSA:3.80.30.20 146 377 4.4E-79 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 Pfam PF01938 TRAM domain 379 440 8.4E-18 T 22-04-2016 IPR002792 TRAM domain VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 PANTHER PTHR11918:SF43 1 474 1.2E-237 T 22-04-2016 VCLMA_RS04495 d66508d15c7964b02ed7bf303c524461 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 3.9E-151 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 Gene3D G3DSA:3.30.70.1430 572 617 3.7E-4 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 SUPERFAMILY SSF82693 572 619 7.15E-5 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 SUPERFAMILY SSF82693 150 196 5.75E-18 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 SUPERFAMILY SSF82693 284 337 5.75E-18 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 2.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 2.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 2.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 2.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 2.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 2.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.0E-27 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 Gene3D G3DSA:3.30.70.1430 54 153 4.1E-28 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 PANTHER PTHR32063:SF18 15 1032 0.0 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 Pfam PF00873 AcrB/AcrD/AcrF family 18 1026 6.4E-170 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 SUPERFAMILY SSF82866 807 1028 1.14E-45 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 PANTHER PTHR32063 15 1032 0.0 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 SUPERFAMILY SSF82714 726 801 5.62E-8 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 Gene3D G3DSA:1.10.3850.10 814 1026 4.4E-55 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 SUPERFAMILY SSF82714 198 281 4.32E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 Gene3D G3DSA:1.20.1640.10 304 513 3.3E-40 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 SUPERFAMILY SSF82866 306 505 5.75E-34 T 22-04-2016 VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 Gene3D G3DSA:3.30.2090.10 198 281 1.4E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 Gene3D G3DSA:3.30.2090.10 727 801 2.0E-5 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VCLMA_RS07795 33cface9b1a0689dc6ac79d60f26f092 1032 SUPERFAMILY SSF82693 54 149 7.15E-23 T 22-04-2016 VCLMA_RS09580 29829a9963970e39e00b53a9e07c3d9f 76 PANTHER PTHR33238 1 76 8.2E-24 T 22-04-2016 VCLMA_RS09580 29829a9963970e39e00b53a9e07c3d9f 76 Pfam PF04023 FeoA domain 1 74 3.4E-17 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VCLMA_RS09580 29829a9963970e39e00b53a9e07c3d9f 76 SUPERFAMILY SSF50037 4 74 7.55E-19 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal VCLMA_RS09580 29829a9963970e39e00b53a9e07c3d9f 76 SMART SM00899 1 74 1.7E-21 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VCLMA_RS11710 40742cd5c88a9212cf05cfb0afb48e94 212 PANTHER PTHR36573 1 212 4.6E-82 T 22-04-2016 VCLMA_RS11710 40742cd5c88a9212cf05cfb0afb48e94 212 Pfam PF05494 MlaC protein 34 199 5.6E-48 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VCLMA_RS11710 40742cd5c88a9212cf05cfb0afb48e94 212 Gene3D G3DSA:1.10.10.640 78 112 7.0E-10 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VCLMA_RS11710 40742cd5c88a9212cf05cfb0afb48e94 212 Gene3D G3DSA:1.10.10.640 173 202 7.0E-10 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical VCLMA_RS11710 40742cd5c88a9212cf05cfb0afb48e94 212 Gene3D G3DSA:3.10.450.50 27 71 2.2E-18 T 22-04-2016 IPR032710 NTF2-like domain VCLMA_RS11710 40742cd5c88a9212cf05cfb0afb48e94 212 Gene3D G3DSA:3.10.450.50 115 172 2.2E-18 T 22-04-2016 IPR032710 NTF2-like domain VCLMA_RS11710 40742cd5c88a9212cf05cfb0afb48e94 212 PIRSF PIRSF004649 1 211 3.6E-57 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VCLMA_RS08105 605fbe77d9d6fc245b23b38e1a00045a 303 Gene3D G3DSA:3.40.50.1100 118 293 2.1E-14 T 22-04-2016 VCLMA_RS08105 605fbe77d9d6fc245b23b38e1a00045a 303 Gene3D G3DSA:3.40.50.1100 33 107 3.6E-5 T 22-04-2016 VCLMA_RS08105 605fbe77d9d6fc245b23b38e1a00045a 303 SUPERFAMILY SSF53686 7 294 1.23E-56 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS08105 605fbe77d9d6fc245b23b38e1a00045a 303 PIRSF PIRSF006278 4 297 2.8E-19 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VCLMA_RS08105 605fbe77d9d6fc245b23b38e1a00045a 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 199 4.2E-9 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS05850 39db2187659b8f8228d76d7539c2f995 179 Gene3D G3DSA:3.40.50.300 3 177 3.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05850 39db2187659b8f8228d76d7539c2f995 179 PANTHER PTHR34848 3 179 3.2E-78 T 22-04-2016 VCLMA_RS05850 39db2187659b8f8228d76d7539c2f995 179 PIRSF PIRSF006135 2 179 1.9E-58 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VCLMA_RS05850 39db2187659b8f8228d76d7539c2f995 179 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 176 1.1E-62 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 VCLMA_RS05850 39db2187659b8f8228d76d7539c2f995 179 SUPERFAMILY SSF52540 3 177 8.16E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 PANTHER PTHR19211 1 525 0.0 T 22-04-2016 VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 SMART SM00382 343 511 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 SMART SM00382 26 238 1.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 Pfam PF12848 ABC transporter 224 309 7.3E-21 T 22-04-2016 IPR032781 ABC-transporter extension domain VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 PANTHER PTHR19211:SF38 1 525 0.0 T 22-04-2016 VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 SUPERFAMILY SSF52540 299 520 6.84E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 SUPERFAMILY SSF52540 7 237 1.29E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 Gene3D G3DSA:3.40.50.300 4 100 5.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 Gene3D G3DSA:3.40.50.300 132 281 5.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 Gene3D G3DSA:3.40.50.300 319 527 5.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 Pfam PF00005 ABC transporter 18 184 2.4E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS07050 e81948d582ab4814c1df9546030b3a3c 530 Pfam PF00005 ABC transporter 336 466 2.7E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 PANTHER PTHR11649 68 253 6.2E-73 T 22-04-2016 VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 PANTHER PTHR11649:SF5 68 253 6.2E-73 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 PANTHER PTHR11649 4 47 6.2E-73 T 22-04-2016 VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 Gene3D G3DSA:3.40.50.300 81 253 4.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 Pfam PF01926 50S ribosome-binding GTPase 88 205 3.1E-25 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 SUPERFAMILY SSF52540 83 252 6.72E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 SUPERFAMILY SSF52540 17 47 6.72E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 108 3.7E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 158 176 3.7E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 85 250 1.7E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS16615 756b3315ca593fb70cc9bf06e93da857 253 PANTHER PTHR11649:SF5 4 47 6.2E-73 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VCLMA_RS04085 6bb3af543609ab4c9eb82922b9ce4443 67 Pfam PF06786 Uncharacterised protein family (UPF0253) 1 67 6.7E-34 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 VCLMA_RS04085 6bb3af543609ab4c9eb82922b9ce4443 67 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 65 4.0E-15 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 VCLMA_RS04085 6bb3af543609ab4c9eb82922b9ce4443 67 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 67 26.875 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 VCLMA_RS14810 fe5c84de927b496b54a67f77f6a355b2 301 PIRSF PIRSF038896 5 301 1.9E-74 T 22-04-2016 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 VCLMA_RS14810 fe5c84de927b496b54a67f77f6a355b2 301 PANTHER PTHR15032 1 301 1.4E-104 T 22-04-2016 VCLMA_RS14810 fe5c84de927b496b54a67f77f6a355b2 301 SUPERFAMILY SSF56281 45 298 1.7E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS14810 fe5c84de927b496b54a67f77f6a355b2 301 Pfam PF12706 Beta-lactamase superfamily domain 88 289 1.2E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS14810 fe5c84de927b496b54a67f77f6a355b2 301 Gene3D G3DSA:3.60.15.10 33 301 1.2E-81 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS14810 fe5c84de927b496b54a67f77f6a355b2 301 PANTHER PTHR15032:SF4 1 301 1.4E-104 T 22-04-2016 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624 480 535 0.0 T 22-04-2016 IPR033247 Transketolase family VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624 553 767 0.0 T 22-04-2016 IPR033247 Transketolase family VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624 361 450 0.0 T 22-04-2016 IPR033247 Transketolase family VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624 786 868 0.0 T 22-04-2016 IPR033247 Transketolase family VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624 73 292 0.0 T 22-04-2016 IPR033247 Transketolase family VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 SUPERFAMILY SSF52518 56 469 3.54E-140 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 Gene3D G3DSA:3.40.50.920 706 885 2.2E-75 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 SUPERFAMILY SSF52518 475 700 3.41E-96 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 885 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 SUPERFAMILY SSF52922 701 885 1.0E-58 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 Gene3D G3DSA:3.40.50.970 55 469 5.1E-154 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PIRSF PIRSF000156 1 886 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 1.4E-4 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 104 294 4.2E-9 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624:SF67 480 535 0.0 T 22-04-2016 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624:SF67 553 767 0.0 T 22-04-2016 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624:SF67 361 450 0.0 T 22-04-2016 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624:SF67 786 868 0.0 T 22-04-2016 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 PANTHER PTHR11624:SF67 73 292 0.0 T 22-04-2016 VCLMA_RS11175 463456b3c391031277edcd2135d0c745 886 Gene3D G3DSA:3.40.50.970 474 704 3.6E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS08290 d91d0d5def283123da16016d97859e7b 148 PANTHER PTHR38978 2 147 6.6E-83 T 22-04-2016 VCLMA_RS08290 d91d0d5def283123da16016d97859e7b 148 Pfam PF10980 Protein of unknown function (DUF2787) 16 145 1.5E-50 T 22-04-2016 IPR021248 Protein of unknown function DUF2787 VCLMA_RS08290 d91d0d5def283123da16016d97859e7b 148 PANTHER PTHR38978:SF2 2 147 6.6E-83 T 22-04-2016 VCLMA_RS00205 9d5217df35605fec9b459e19bf104983 481 Pfam PF02386 Cation transport protein 45 475 1.4E-48 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VCLMA_RS00205 9d5217df35605fec9b459e19bf104983 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 2.4E-106 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VCLMA_RS00205 9d5217df35605fec9b459e19bf104983 481 PIRSF PIRSF006247 1 481 6.6E-167 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 VCLMA_RS00205 9d5217df35605fec9b459e19bf104983 481 PANTHER PTHR32024:SF3 1 480 0.0 T 22-04-2016 VCLMA_RS00205 9d5217df35605fec9b459e19bf104983 481 PANTHER PTHR32024 1 480 0.0 T 22-04-2016 VCLMA_RS08710 78644aaa5dbf775b87faf60203d36ca0 116 PANTHER PTHR23089 2 112 1.4E-48 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VCLMA_RS08710 78644aaa5dbf775b87faf60203d36ca0 116 PRINTS PR00332 Histidine triad family signature 27 45 1.3E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VCLMA_RS08710 78644aaa5dbf775b87faf60203d36ca0 116 PRINTS PR00332 Histidine triad family signature 95 105 1.3E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VCLMA_RS08710 78644aaa5dbf775b87faf60203d36ca0 116 PRINTS PR00332 Histidine triad family signature 6 22 1.3E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VCLMA_RS08710 78644aaa5dbf775b87faf60203d36ca0 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site VCLMA_RS08710 78644aaa5dbf775b87faf60203d36ca0 116 PANTHER PTHR23089:SF2 2 112 1.4E-48 T 22-04-2016 VCLMA_RS08710 78644aaa5dbf775b87faf60203d36ca0 116 SUPERFAMILY SSF54197 2 113 2.01E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VCLMA_RS08710 78644aaa5dbf775b87faf60203d36ca0 116 Gene3D G3DSA:3.30.428.10 3 110 1.1E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VCLMA_RS08710 78644aaa5dbf775b87faf60203d36ca0 116 Pfam PF01230 HIT domain 12 109 1.0E-28 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VCLMA_RS05660 b11c88a6b0b057531e6c908155a40024 511 Gene3D G3DSA:1.20.200.10 198 495 1.4E-131 T 22-04-2016 VCLMA_RS05660 b11c88a6b0b057531e6c908155a40024 511 Pfam PF00221 Aromatic amino acid lyase 11 471 8.2E-193 T 22-04-2016 IPR001106 Aromatic amino acid lyase VCLMA_RS05660 b11c88a6b0b057531e6c908155a40024 511 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.745 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05660 b11c88a6b0b057531e6c908155a40024 511 PANTHER PTHR10362 3 494 1.2E-263 T 22-04-2016 VCLMA_RS05660 b11c88a6b0b057531e6c908155a40024 511 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 498 3.1E-216 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05660 b11c88a6b0b057531e6c908155a40024 511 SUPERFAMILY SSF48557 4 502 7.14E-198 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VCLMA_RS05660 b11c88a6b0b057531e6c908155a40024 511 Gene3D G3DSA:1.10.275.10 4 197 3.0E-77 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VCLMA_RS05660 b11c88a6b0b057531e6c908155a40024 511 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Pfam PF12826 Helix-hairpin-helix motif 510 573 9.1E-21 T 22-04-2016 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Gene3D G3DSA:3.30.470.30 119 252 3.9E-51 T 22-04-2016 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 597 666 3.8E-10 T 22-04-2016 IPR001357 BRCT domain VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SUPERFAMILY SSF52113 595 668 4.8E-16 T 22-04-2016 IPR001357 BRCT domain VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 7.6E-132 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Gene3D G3DSA:1.10.150.20 435 502 1.2E-26 T 22-04-2016 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SMART SM00532 3 448 3.9E-276 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SMART SM00292 594 669 3.8E-8 T 22-04-2016 IPR001357 BRCT domain VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.0E-9 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SUPERFAMILY SSF50249 318 399 2.91E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Pfam PF14520 Helix-hairpin-helix domain 446 501 6.5E-6 T 22-04-2016 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 PIRSF PIRSF001604 1 669 1.4E-249 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SMART SM00278 544 563 1800.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SMART SM00278 480 499 16.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SMART SM00278 512 531 350.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SMART SM00278 446 465 19.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Hamap MF_01588 DNA ligase [ligA]. 2 668 53.313 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 PANTHER PTHR23389 1 532 7.2E-207 T 22-04-2016 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SUPERFAMILY SSF47781 403 583 3.48E-60 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Gene3D G3DSA:2.40.50.140 320 391 9.2E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Gene3D G3DSA:1.10.287.610 2 67 2.1E-27 T 22-04-2016 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 SUPERFAMILY SSF56091 2 316 6.77E-123 T 22-04-2016 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 663 5.4E-262 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 PANTHER PTHR23389:SF9 1 532 7.2E-207 T 22-04-2016 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 7.2E-36 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Gene3D G3DSA:1.10.150.20 504 584 2.1E-29 T 22-04-2016 VCLMA_RS04540 524b79991f9b42a5c55a80ebab6678e9 669 Gene3D G3DSA:3.40.50.10190 594 669 5.5E-21 T 22-04-2016 IPR001357 BRCT domain VCLMA_RS01415 9410f9f2074b5a276f2585a875fa6eb1 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 22-04-2016 IPR001882 Biotin-binding site VCLMA_RS01415 9410f9f2074b5a276f2585a875fa6eb1 153 PANTHER PTHR23151 1 153 5.9E-57 T 22-04-2016 VCLMA_RS01415 9410f9f2074b5a276f2585a875fa6eb1 153 SUPERFAMILY SSF51230 78 153 5.5E-26 T 22-04-2016 IPR011053 Single hybrid motif VCLMA_RS01415 9410f9f2074b5a276f2585a875fa6eb1 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 4.3E-62 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VCLMA_RS01415 9410f9f2074b5a276f2585a875fa6eb1 153 Gene3D G3DSA:2.40.50.100 77 153 2.1E-32 T 22-04-2016 VCLMA_RS01415 9410f9f2074b5a276f2585a875fa6eb1 153 Pfam PF00364 Biotin-requiring enzyme 79 152 1.3E-24 T 22-04-2016 IPR000089 Biotin/lipoyl attachment VCLMA_RS01415 9410f9f2074b5a276f2585a875fa6eb1 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 1.5E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VCLMA_RS01415 9410f9f2074b5a276f2585a875fa6eb1 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 1.5E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VCLMA_RS01415 9410f9f2074b5a276f2585a875fa6eb1 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 1.5E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 VCLMA_RS02380 6f87644c3e9ae1e82a8d1e5d9060bf08 162 Hamap MF_00746 Protein SprT [sprT]. 8 161 42.1 T 22-04-2016 IPR023483 Uncharacterised protein family SprT VCLMA_RS02380 6f87644c3e9ae1e82a8d1e5d9060bf08 162 Pfam PF10263 SprT-like family 16 159 1.4E-28 T 22-04-2016 IPR006640 SprT-like VCLMA_RS02380 6f87644c3e9ae1e82a8d1e5d9060bf08 162 PANTHER PTHR38773 1 161 1.2E-90 T 22-04-2016 VCLMA_RS02380 6f87644c3e9ae1e82a8d1e5d9060bf08 162 SMART SM00731 12 161 1.0E-64 T 22-04-2016 IPR006640 SprT-like VCLMA_RS09990 6454d29c744aa4a23220c60e4c0b581f 382 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 2.3E-68 T 22-04-2016 IPR018642 Protein of unknown function DUF2066 VCLMA_RS05845 e4e9f4c0e36cc5909be97688d681d41c 261 PANTHER PTHR34148 2 260 2.4E-60 T 22-04-2016 VCLMA_RS05845 e4e9f4c0e36cc5909be97688d681d41c 261 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 12 249 3.6E-35 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VCLMA_RS05845 e4e9f4c0e36cc5909be97688d681d41c 261 PANTHER PTHR34148:SF1 2 260 2.4E-60 T 22-04-2016 VCLMA_RS05845 e4e9f4c0e36cc5909be97688d681d41c 261 Pfam PF02654 Cobalamin-5-phosphate synthase 15 249 3.3E-54 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VCLMA_RS05845 e4e9f4c0e36cc5909be97688d681d41c 261 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 261 47.647 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 VCLMA_RS01145 1ff7e45e7bb0acaa6b616ceb4e426980 186 PANTHER PTHR23416:SF50 66 176 1.2E-24 T 22-04-2016 VCLMA_RS01145 1ff7e45e7bb0acaa6b616ceb4e426980 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 124 158 9.4E-6 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS01145 1ff7e45e7bb0acaa6b616ceb4e426980 186 PANTHER PTHR23416 66 176 1.2E-24 T 22-04-2016 VCLMA_RS01145 1ff7e45e7bb0acaa6b616ceb4e426980 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 132 160 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VCLMA_RS01145 1ff7e45e7bb0acaa6b616ceb4e426980 186 SUPERFAMILY SSF51161 19 174 9.03E-28 T 22-04-2016 IPR011004 Trimeric LpxA-like VCLMA_RS01145 1ff7e45e7bb0acaa6b616ceb4e426980 186 Gene3D G3DSA:2.160.10.10 7 179 1.4E-38 T 22-04-2016 VCLMA_RS01980 687753c8834e50b693653ea40eddb64e 372 Pfam PF00266 Aminotransferase class-V 12 338 2.4E-37 T 22-04-2016 IPR000192 Aminotransferase class V domain VCLMA_RS01980 687753c8834e50b693653ea40eddb64e 372 PIRSF PIRSF000524 5 372 9.2E-110 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 VCLMA_RS01980 687753c8834e50b693653ea40eddb64e 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VCLMA_RS01980 687753c8834e50b693653ea40eddb64e 372 SUPERFAMILY SSF53383 9 371 2.06E-103 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS01980 687753c8834e50b693653ea40eddb64e 372 Gene3D G3DSA:3.90.1150.10 269 371 3.8E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS01980 687753c8834e50b693653ea40eddb64e 372 PANTHER PTHR21152 1 371 2.6E-126 T 22-04-2016 VCLMA_RS01980 687753c8834e50b693653ea40eddb64e 372 Gene3D G3DSA:3.40.640.10 23 268 4.4E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 94 8.0E-19 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 13 302 6.5E-117 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 Gene3D G3DSA:1.10.443.10 117 293 3.8E-58 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 PANTHER PTHR30349 11 302 1.2E-123 T 22-04-2016 VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 SUPERFAMILY SSF56349 11 294 1.38E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 Gene3D G3DSA:1.10.150.130 11 103 1.5E-28 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 8 302 61.687 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 Pfam PF00589 Phage integrase family 117 288 2.4E-54 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 302 30.422 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VCLMA_RS11200 1ef13c1a788ef142c94d899db0ef4039 302 PANTHER PTHR30349:SF5 11 302 1.2E-123 T 22-04-2016 VCLMA_RS12190 84635132f8beb44b084f2bd8829b3a54 339 PANTHER PTHR30420 1 338 1.7E-207 T 22-04-2016 VCLMA_RS12190 84635132f8beb44b084f2bd8829b3a54 339 PANTHER PTHR30420:SF1 1 338 1.7E-207 T 22-04-2016 VCLMA_RS12190 84635132f8beb44b084f2bd8829b3a54 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 6.1E-139 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VCLMA_RS12190 84635132f8beb44b084f2bd8829b3a54 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 3.8E-133 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VCLMA_RS12190 84635132f8beb44b084f2bd8829b3a54 339 SUPERFAMILY SSF55729 1 337 2.26E-129 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS12190 84635132f8beb44b084f2bd8829b3a54 339 Gene3D G3DSA:2.40.40.20 284 339 2.6E-13 T 22-04-2016 VCLMA_RS12190 84635132f8beb44b084f2bd8829b3a54 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 4.2E-132 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 VCLMA_RS04075 ca5af89420fc9352fdc1e5523eb91e39 145 SMART SM01321 11 129 6.2E-41 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VCLMA_RS04075 ca5af89420fc9352fdc1e5523eb91e39 145 Gene3D G3DSA:3.30.70.1290 2 132 8.7E-50 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VCLMA_RS04075 ca5af89420fc9352fdc1e5523eb91e39 145 SUPERFAMILY SSF143422 1 130 2.62E-45 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VCLMA_RS04075 ca5af89420fc9352fdc1e5523eb91e39 145 Pfam PF01797 Transposase IS200 like 11 129 5.0E-38 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VCLMA_RS04075 ca5af89420fc9352fdc1e5523eb91e39 145 PANTHER PTHR33360:SF2 2 144 2.3E-79 T 22-04-2016 VCLMA_RS04075 ca5af89420fc9352fdc1e5523eb91e39 145 PANTHER PTHR33360 2 144 2.3E-79 T 22-04-2016 VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 4.4E-34 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 SUPERFAMILY SSF54292 5 106 5.51E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 Gene3D G3DSA:1.10.1060.10 107 229 2.2E-35 T 22-04-2016 VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 6.7E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 9.1E-94 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 SUPERFAMILY SSF46548 107 226 9.77E-31 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 PANTHER PTHR11921 5 229 1.3E-102 T 22-04-2016 VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VCLMA_RS12370 4c013f3be89d511b0d7ad1d2b60da4f2 252 Gene3D G3DSA:3.10.20.30 3 106 9.4E-35 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS07860 2bb03f3b468fd9f88a4be693fa429aff 129 Pfam PF11042 Protein of unknown function (DUF2750) 23 122 9.3E-37 T 22-04-2016 IPR021284 Protein of unknown function DUF2750 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 SUPERFAMILY SSF47819 193 300 3.4E-21 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 Gene3D G3DSA:3.30.420.10 2 177 7.9E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 Hamap MF_01899 Ribonuclease D [rnd]. 3 372 43.534 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 SUPERFAMILY SSF47819 296 371 7.85E-21 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 Pfam PF00570 HRDC domain 213 279 1.5E-7 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 SUPERFAMILY SSF53098 2 209 1.6E-64 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 PANTHER PTHR12124:SF42 1 347 4.6E-85 T 22-04-2016 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 Pfam PF01612 3'-5' exonuclease 3 170 7.2E-36 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 SMART SM00474 3 171 3.2E-38 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 TIGRFAM TIGR01388 rnd: ribonuclease D 5 372 2.2E-162 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VCLMA_RS09115 3aa0bd93b2edd509f98774107fb8b0dd 373 PANTHER PTHR12124 1 347 4.6E-85 T 22-04-2016 VCLMA_RS12675 ce3f80e82c5b9d3b352b56505888da4c 182 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VCLMA_RS12675 ce3f80e82c5b9d3b352b56505888da4c 182 PRINTS PR00502 NUDIX hydrolase family signature 75 89 4.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase VCLMA_RS12675 ce3f80e82c5b9d3b352b56505888da4c 182 PRINTS PR00502 NUDIX hydrolase family signature 89 104 4.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase VCLMA_RS12675 ce3f80e82c5b9d3b352b56505888da4c 182 PANTHER PTHR11839:SF12 1 181 2.6E-106 T 22-04-2016 VCLMA_RS12675 ce3f80e82c5b9d3b352b56505888da4c 182 Gene3D G3DSA:3.90.79.10 8 181 2.5E-44 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS12675 ce3f80e82c5b9d3b352b56505888da4c 182 Pfam PF00293 NUDIX domain 47 155 6.5E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VCLMA_RS12675 ce3f80e82c5b9d3b352b56505888da4c 182 PANTHER PTHR11839 1 181 2.6E-106 T 22-04-2016 VCLMA_RS12675 ce3f80e82c5b9d3b352b56505888da4c 182 SUPERFAMILY SSF55811 4 177 2.3E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS10600 2d92142369a1e0e635cc779ff12bd116 362 SUPERFAMILY SSF53187 34 328 6.28E-77 T 22-04-2016 VCLMA_RS10600 2d92142369a1e0e635cc779ff12bd116 362 PANTHER PTHR37326 19 346 7.3E-126 T 22-04-2016 VCLMA_RS10600 2d92142369a1e0e635cc779ff12bd116 362 Gene3D G3DSA:2.40.50.100 261 322 2.8E-7 T 22-04-2016 VCLMA_RS10600 2d92142369a1e0e635cc779ff12bd116 362 PIRSF PIRSF039012 15 334 4.5E-93 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VCLMA_RS10600 2d92142369a1e0e635cc779ff12bd116 362 PANTHER PTHR37326:SF1 19 346 7.3E-126 T 22-04-2016 VCLMA_RS10600 2d92142369a1e0e635cc779ff12bd116 362 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 59 326 3.7E-69 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VCLMA_RS10600 2d92142369a1e0e635cc779ff12bd116 362 Gene3D G3DSA:3.40.630.10 43 241 1.4E-27 T 22-04-2016 VCLMA_RS12985 168d1443a4e9daac487eaf633b55d5ff 293 Gene3D G3DSA:3.90.1530.10 34 129 6.3E-40 T 22-04-2016 VCLMA_RS12985 168d1443a4e9daac487eaf633b55d5ff 293 Gene3D G3DSA:1.10.10.10 130 174 5.9E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12985 168d1443a4e9daac487eaf633b55d5ff 293 Pfam PF02195 ParB-like nuclease domain 43 130 6.9E-29 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VCLMA_RS12985 168d1443a4e9daac487eaf633b55d5ff 293 SMART SM00470 40 130 1.3E-35 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VCLMA_RS12985 168d1443a4e9daac487eaf633b55d5ff 293 PANTHER PTHR33375 1 291 2.0E-96 T 22-04-2016 VCLMA_RS12985 168d1443a4e9daac487eaf633b55d5ff 293 SUPERFAMILY SSF110849 41 132 3.4E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin VCLMA_RS12985 168d1443a4e9daac487eaf633b55d5ff 293 PANTHER PTHR33375:SF1 1 291 2.0E-96 T 22-04-2016 VCLMA_RS12985 168d1443a4e9daac487eaf633b55d5ff 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 214 2.6E-58 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VCLMA_RS12985 168d1443a4e9daac487eaf633b55d5ff 293 SUPERFAMILY SSF109709 122 230 1.31E-33 T 22-04-2016 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 PANTHER PTHR11938 1 183 4.1E-95 T 22-04-2016 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 Gene3D G3DSA:3.30.70.20 120 175 1.4E-16 T 22-04-2016 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 SUPERFAMILY SSF54862 37 172 5.5E-31 T 22-04-2016 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 Pfam PF14697 4Fe-4S dicluster domain 107 161 2.0E-17 T 22-04-2016 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 182 42.687 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 PIRSF PIRSF005784 3 188 2.4E-86 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 PANTHER PTHR11938:SF64 1 183 4.1E-95 T 22-04-2016 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 187 1.3E-88 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 Pfam PF04060 Putative Fe-S cluster 44 75 8.9E-15 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 114 125 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS04760 8992020dfc7b4712a4a2d90b87a17887 195 Gene3D G3DSA:1.10.1060.10 41 119 1.2E-5 T 22-04-2016 VCLMA_RS08690 5b35fb888e185fc15e68c0cc9ea2dc5a 286 SUPERFAMILY SSF56112 31 268 2.48E-34 T 22-04-2016 IPR011009 Protein kinase-like domain VCLMA_RS08690 5b35fb888e185fc15e68c0cc9ea2dc5a 286 Pfam PF01633 Choline/ethanolamine kinase 65 211 8.0E-10 T 22-04-2016 VCLMA_RS08690 5b35fb888e185fc15e68c0cc9ea2dc5a 286 Gene3D G3DSA:3.90.1200.10 82 271 2.3E-12 T 22-04-2016 VCLMA_RS08735 87d105c2775a8e994bba2bb713eb3501 173 PANTHER PTHR36570:SF2 1 173 3.8E-94 T 22-04-2016 VCLMA_RS08735 87d105c2775a8e994bba2bb713eb3501 173 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 4.1E-42 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VCLMA_RS08735 87d105c2775a8e994bba2bb713eb3501 173 PANTHER PTHR36570 1 173 3.8E-94 T 22-04-2016 VCLMA_RS08735 87d105c2775a8e994bba2bb713eb3501 173 Gene3D G3DSA:1.20.1550.10 4 171 1.9E-62 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain VCLMA_RS08735 87d105c2775a8e994bba2bb713eb3501 173 SUPERFAMILY SSF158442 17 162 1.24E-43 T 22-04-2016 VCLMA_RS08735 87d105c2775a8e994bba2bb713eb3501 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 21.885 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 Gene3D G3DSA:1.10.8.60 327 387 1.8E-15 T 22-04-2016 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 SUPERFAMILY SSF46689 427 475 3.58E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 PANTHER PTHR32071 1 476 4.6E-227 T 22-04-2016 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 Gene3D G3DSA:3.40.50.2300 17 140 9.8E-29 T 22-04-2016 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 Gene3D G3DSA:1.10.10.60 428 476 6.0E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 SMART SM00448 16 127 6.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 Pfam PF00158 Sigma-54 interaction domain 155 321 1.3E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 SUPERFAMILY SSF52540 155 384 6.62E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 SUPERFAMILY SSF52172 16 199 1.24E-37 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 Gene3D G3DSA:3.40.50.300 153 326 5.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 Pfam PF02954 Bacterial regulatory protein, Fis family 435 475 4.8E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 Pfam PF00072 Response regulator receiver domain 18 128 2.2E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 PANTHER PTHR32071:SF18 1 476 4.6E-227 T 22-04-2016 VCLMA_RS07060 49e808b5a107adf94f53155c21897478 484 SMART SM00382 175 318 5.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS12690 c7d4296ceffe740e63aa9fda25d31720 165 PIRSF PIRSF006291 2 164 1.8E-41 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VCLMA_RS12690 c7d4296ceffe740e63aa9fda25d31720 165 Gene3D G3DSA:3.30.1360.100 86 164 3.8E-35 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VCLMA_RS12690 c7d4296ceffe740e63aa9fda25d31720 165 SUPERFAMILY SSF103054 86 164 3.53E-23 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain VCLMA_RS12690 c7d4296ceffe740e63aa9fda25d31720 165 Pfam PF04612 Type II secretion system (T2SS), protein M 6 163 7.1E-55 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 Gene3D G3DSA:3.90.1550.10 1 247 1.4E-78 T 22-04-2016 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 249 332 2.1E-19 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 Gene3D G3DSA:3.30.390.50 248 334 9.5E-18 T 22-04-2016 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 PANTHER PTHR12561:SF5 5 337 1.8E-246 T 22-04-2016 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 58.964 T 22-04-2016 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 UniPathway: UPA00537|UniPathway: UPA00537 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 SUPERFAMILY SSF82649 248 337 1.73E-25 T 22-04-2016 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 3 323 4.2E-110 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 55 157 9.4E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 PANTHER PTHR12561 5 337 1.8E-246 T 22-04-2016 VCLMA_RS06545 5075610b37589c270b6e19f63c97c56d 338 SUPERFAMILY SSF55681 3 247 2.82E-72 T 22-04-2016 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 Pfam PF14842 FliG N-terminal domain 21 121 4.2E-27 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 Gene3D G3DSA:1.10.220.30 25 90 5.6E-15 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 Gene3D G3DSA:1.10.220.30 121 205 1.9E-29 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 Pfam PF14841 FliG middle domain 131 203 1.4E-23 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PANTHER PTHR30534 8 348 4.4E-109 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 Pfam PF01706 FliG C-terminal domain 234 340 1.3E-41 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 17 346 5.4E-94 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 Gene3D G3DSA:1.10.220.30 211 346 3.9E-42 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 211 236 5.3E-58 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 264 284 5.3E-58 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 50 76 5.3E-58 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 242 262 5.3E-58 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 288 314 5.3E-58 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 130 153 5.3E-58 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PRINTS PR00954 Flagellar motor switch protein FliG signature 21 37 5.3E-58 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PANTHER PTHR30534:SF0 8 348 4.4E-109 T 22-04-2016 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 PIRSF PIRSF003161 16 348 1.6E-110 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 SUPERFAMILY SSF48029 18 134 8.37E-20 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VCLMA_RS09830 6e7a9326044edb75cb6bb1bce716eba4 348 SUPERFAMILY SSF48029 130 341 1.83E-66 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Gene3D G3DSA:3.30.1360.120 2 120 1.4E-43 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 PANTHER PTHR11649:SF56 7 453 7.5E-174 T 22-04-2016 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Gene3D G3DSA:1.20.120.430 383 453 9.7E-61 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Gene3D G3DSA:1.20.120.430 121 181 9.7E-61 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Gene3D G3DSA:1.20.120.430 246 270 9.7E-61 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 1.2E-102 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Gene3D G3DSA:3.40.50.300 207 245 1.3E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 33.107 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Pfam PF01926 50S ribosome-binding GTPase 217 308 3.7E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.3E-35 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 SUPERFAMILY SSF52540 187 371 1.06E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 SUPERFAMILY SSF52540 70 151 1.06E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Pfam PF12631 MnmE helical domain 122 450 1.7E-62 T 22-04-2016 IPR025867 MnmE, helical domain VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 Gene3D G3DSA:3.40.50.300 285 375 8.4E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 6.8E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 PANTHER PTHR11649 7 453 7.5E-174 T 22-04-2016 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 SUPERFAMILY SSF116878 120 219 3.14E-53 T 22-04-2016 VCLMA_RS00015 6fd0e08c8c69d450f3948f590d0ab4ba 453 SUPERFAMILY SSF116878 378 453 3.14E-53 T 22-04-2016 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 Pfam PF06723 MreB/Mbl protein 11 338 1.3E-148 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 PANTHER PTHR19375:SF117 9 336 2.0E-188 T 22-04-2016 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 PANTHER PTHR19375 9 336 2.0E-188 T 22-04-2016 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.90.640.10 191 263 4.3E-31 T 22-04-2016 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.30.420.40 9 163 2.5E-46 T 22-04-2016 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 SUPERFAMILY SSF53067 154 340 9.52E-51 T 22-04-2016 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 2.4E-164 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.30.420.40 164 190 3.9E-35 T 22-04-2016 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 Gene3D G3DSA:3.30.420.40 267 321 3.9E-35 T 22-04-2016 VCLMA_RS02095 f06864a691a763c6d420bc53bb6f11bb 347 SUPERFAMILY SSF53067 9 152 1.11E-37 T 22-04-2016 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 SMART SM01016 5 87 7.0E-28 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 SUPERFAMILY SSF52374 111 454 3.11E-97 T 22-04-2016 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 Gene3D G3DSA:1.10.730.10 455 577 1.1E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 27.987 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 PANTHER PTHR11956:SF1 1 577 1.2E-266 T 22-04-2016 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 SUPERFAMILY SSF55190 2 96 3.27E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 2.1E-19 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 PANTHER PTHR11956 1 577 1.2E-266 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 SUPERFAMILY SSF47323 455 577 1.57E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 SMART SM00836 461 577 6.2E-40 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 Pfam PF05746 DALR anticodon binding domain 461 577 1.2E-35 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 Gene3D G3DSA:3.30.1360.70 2 105 3.3E-33 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 Gene3D G3DSA:3.40.50.620 110 454 9.3E-115 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 4.7E-196 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS09560 7aeafac22a2a58fd02575232ea4ec40b 577 Pfam PF00750 tRNA synthetases class I (R) 98 447 2.1E-160 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 SUPERFAMILY SSF88659 198 283 2.24E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 Gene3D G3DSA:1.10.601.10 13 122 2.6E-34 T 22-04-2016 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 Pfam PF04545 Sigma-70, region 4 229 281 8.2E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 53.881 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 2.6E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 SUPERFAMILY SSF88946 11 122 6.02E-40 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 PANTHER PTHR30376 2 286 7.8E-126 T 22-04-2016 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 Gene3D G3DSA:1.10.10.10 224 282 2.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 6.6E-8 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 Pfam PF04542 Sigma-70 region 2 53 122 5.6E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 253 268 7.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 268 279 7.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 77 90 7.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 PRINTS PR00046 Major sigma-70 factor signature 233 245 7.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS00740 5f6c6ad2c242f9c2649c91f3b925fb80 286 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 283 1.8E-126 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 VCLMA_RS01110 62ba9a8b98f53bcd933f56dc92970fa0 527 SUPERFAMILY SSF56112 483 509 1.33E-8 T 22-04-2016 IPR011009 Protein kinase-like domain VCLMA_RS01110 62ba9a8b98f53bcd933f56dc92970fa0 527 SUPERFAMILY SSF56112 335 433 1.33E-8 T 22-04-2016 IPR011009 Protein kinase-like domain VCLMA_RS01110 62ba9a8b98f53bcd933f56dc92970fa0 527 Gene3D G3DSA:3.90.1200.10 333 405 7.4E-4 T 22-04-2016 VCLMA_RS01110 62ba9a8b98f53bcd933f56dc92970fa0 527 Gene3D G3DSA:3.90.1200.10 437 443 7.4E-4 T 22-04-2016 VCLMA_RS01110 62ba9a8b98f53bcd933f56dc92970fa0 527 SUPERFAMILY SSF53448 23 218 4.42E-5 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS04880 663a81cec7abc14e4ac01b0fb8213e67 200 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 7 26 3.3E-7 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VCLMA_RS04880 663a81cec7abc14e4ac01b0fb8213e67 200 PANTHER PTHR30069 1 200 1.3E-62 T 22-04-2016 VCLMA_RS04880 663a81cec7abc14e4ac01b0fb8213e67 200 Gene3D G3DSA:3.40.50.300 8 200 9.5E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04880 663a81cec7abc14e4ac01b0fb8213e67 200 PIRSF PIRSF015617 6 200 3.5E-64 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VCLMA_RS04880 663a81cec7abc14e4ac01b0fb8213e67 200 SUPERFAMILY SSF52540 12 200 9.08E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04880 663a81cec7abc14e4ac01b0fb8213e67 200 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 200 1.6E-56 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VCLMA_RS04880 663a81cec7abc14e4ac01b0fb8213e67 200 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 200 1.3E-68 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 PANTHER PTHR30559:SF0 2 358 2.4E-248 T 22-04-2016 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 4.4E-91 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 PANTHER PTHR30559 2 358 2.4E-248 T 22-04-2016 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 PIRSF PIRSF001359 13 358 7.9E-95 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 1.6E-111 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 SUPERFAMILY SSF51569 4 356 2.38E-131 T 22-04-2016 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 Gene3D G3DSA:3.20.20.70 11 354 6.8E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS02420 97cf583eefe0698e49ca2b6d8566adb1 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 5.2E-181 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 PANTHER PTHR30600:SF4 246 461 4.0E-162 T 22-04-2016 VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 PANTHER PTHR30600:SF4 173 221 4.0E-162 T 22-04-2016 VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 PANTHER PTHR30600:SF4 14 98 4.0E-162 T 22-04-2016 VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 Gene3D G3DSA:1.10.760.10 324 461 2.9E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 PANTHER PTHR30600 246 461 4.0E-162 T 22-04-2016 VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 PANTHER PTHR30600 173 221 4.0E-162 T 22-04-2016 VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 PANTHER PTHR30600 14 98 4.0E-162 T 22-04-2016 VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 SUPERFAMILY SSF46626 319 461 1.24E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 21 461 5.3E-137 T 22-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VCLMA_RS05965 9899694416b23f9abb9d067ab9a11e75 461 PIRSF PIRSF028099 3 461 1.8E-177 T 22-04-2016 IPR010538 Di-haem oxidoreductase, putative peroxidase VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 SUPERFAMILY SSF53927 1 147 7.86E-42 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 Gene3D G3DSA:3.40.140.10 32 174 2.4E-44 T 22-04-2016 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 PANTHER PTHR11644 21 288 1.3E-148 T 22-04-2016 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.0E-41 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 PANTHER PTHR11644:SF15 21 288 1.3E-148 T 22-04-2016 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 SUPERFAMILY SSF53927 153 283 1.36E-36 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 PIRSF PIRSF006334 14 295 2.7E-108 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 295 5.0E-114 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 49.633 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 Gene3D G3DSA:3.40.140.10 184 288 6.0E-24 T 22-04-2016 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 140 5.2E-13 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 VCLMA_RS05810 622a443bf2b74df9e6d88a9e3e28e1e7 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VCLMA_RS02705 cbad1fbeceb1ddd67fbbc7b4768b3543 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 4.4E-20 T 22-04-2016 VCLMA_RS02705 cbad1fbeceb1ddd67fbbc7b4768b3543 316 SUPERFAMILY SSF51735 122 245 1.36E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS02705 cbad1fbeceb1ddd67fbbc7b4768b3543 316 PANTHER PTHR11695 17 314 4.1E-87 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VCLMA_RS02705 cbad1fbeceb1ddd67fbbc7b4768b3543 316 SMART SM00829 12 312 4.0E-14 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VCLMA_RS02705 cbad1fbeceb1ddd67fbbc7b4768b3543 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 92 3.0E-6 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VCLMA_RS02705 cbad1fbeceb1ddd67fbbc7b4768b3543 316 Gene3D G3DSA:3.40.50.720 154 238 2.1E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS02705 cbad1fbeceb1ddd67fbbc7b4768b3543 316 PANTHER PTHR11695:SF294 17 314 4.1E-87 T 22-04-2016 VCLMA_RS02705 cbad1fbeceb1ddd67fbbc7b4768b3543 316 Gene3D G3DSA:3.90.180.10 2 153 4.1E-43 T 22-04-2016 IPR011032 GroES-like VCLMA_RS02705 cbad1fbeceb1ddd67fbbc7b4768b3543 316 SUPERFAMILY SSF50129 4 154 2.28E-35 T 22-04-2016 IPR011032 GroES-like VCLMA_RS07835 07ba1c82156230dd9c44906ca297211a 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 2.3E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07835 07ba1c82156230dd9c44906ca297211a 320 Gene3D G3DSA:1.10.3720.10 69 140 1.6E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07835 07ba1c82156230dd9c44906ca297211a 320 Gene3D G3DSA:1.10.3720.10 180 306 1.6E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07835 07ba1c82156230dd9c44906ca297211a 320 PANTHER PTHR30465 171 314 2.9E-177 T 22-04-2016 VCLMA_RS07835 07ba1c82156230dd9c44906ca297211a 320 PANTHER PTHR30465 1 146 2.9E-177 T 22-04-2016 VCLMA_RS07835 07ba1c82156230dd9c44906ca297211a 320 PANTHER PTHR30465:SF65 171 314 2.9E-177 T 22-04-2016 VCLMA_RS07835 07ba1c82156230dd9c44906ca297211a 320 PANTHER PTHR30465:SF65 1 146 2.9E-177 T 22-04-2016 VCLMA_RS07835 07ba1c82156230dd9c44906ca297211a 320 SUPERFAMILY SSF161098 69 137 1.11E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07835 07ba1c82156230dd9c44906ca297211a 320 SUPERFAMILY SSF161098 177 298 1.11E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03935 25e20e2bd12f1310bed34da7a0c5b061 164 Pfam PF11907 Domain of unknown function (DUF3427) 8 157 3.0E-30 T 22-04-2016 IPR021835 Protein of unknown function DUF3427 VCLMA_RS12115 652b41264ff9835fd4ab721c0c7982b6 211 Pfam PF08238 Sel1 repeat 76 106 0.025 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS12115 652b41264ff9835fd4ab721c0c7982b6 211 Pfam PF08238 Sel1 repeat 149 171 180.0 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS12115 652b41264ff9835fd4ab721c0c7982b6 211 Pfam PF08238 Sel1 repeat 108 143 1.6E-5 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS12115 652b41264ff9835fd4ab721c0c7982b6 211 PANTHER PTHR11102 76 175 3.3E-15 T 22-04-2016 VCLMA_RS12115 652b41264ff9835fd4ab721c0c7982b6 211 SUPERFAMILY SSF81901 65 177 6.02E-21 T 22-04-2016 VCLMA_RS12115 652b41264ff9835fd4ab721c0c7982b6 211 SMART SM00671 144 179 18.0 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS12115 652b41264ff9835fd4ab721c0c7982b6 211 SMART SM00671 72 107 0.015 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS12115 652b41264ff9835fd4ab721c0c7982b6 211 SMART SM00671 108 143 2.9E-6 T 22-04-2016 IPR006597 Sel1-like repeat VCLMA_RS12115 652b41264ff9835fd4ab721c0c7982b6 211 Gene3D G3DSA:1.25.40.10 72 178 1.6E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS00420 fec53cd1e32fcc89d32c5f3ea1e45c40 303 Pfam PF00892 EamA-like transporter family 155 286 6.8E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS00420 fec53cd1e32fcc89d32c5f3ea1e45c40 303 Pfam PF00892 EamA-like transporter family 9 141 2.7E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS00420 fec53cd1e32fcc89d32c5f3ea1e45c40 303 SUPERFAMILY SSF103481 189 293 3.79E-12 T 22-04-2016 VCLMA_RS00420 fec53cd1e32fcc89d32c5f3ea1e45c40 303 PANTHER PTHR22911 1 300 5.9E-200 T 22-04-2016 VCLMA_RS00420 fec53cd1e32fcc89d32c5f3ea1e45c40 303 SUPERFAMILY SSF103481 43 144 3.01E-12 T 22-04-2016 VCLMA_RS00420 fec53cd1e32fcc89d32c5f3ea1e45c40 303 PANTHER PTHR22911:SF58 1 300 5.9E-200 T 22-04-2016 VCLMA_RS08180 fcfd3b8d6878bcd491faeeaf4f218f08 298 PANTHER PTHR12128 2 297 9.8E-150 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS08180 fcfd3b8d6878bcd491faeeaf4f218f08 298 Gene3D G3DSA:3.20.20.70 1 296 1.4E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS08180 fcfd3b8d6878bcd491faeeaf4f218f08 298 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 4.4E-50 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS08180 fcfd3b8d6878bcd491faeeaf4f218f08 298 SMART SM01130 3 294 1.6E-67 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS08180 fcfd3b8d6878bcd491faeeaf4f218f08 298 PIRSF PIRSF001365 1 298 6.1E-72 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS08180 fcfd3b8d6878bcd491faeeaf4f218f08 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.5E-6 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS08180 fcfd3b8d6878bcd491faeeaf4f218f08 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 2.5E-6 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 VCLMA_RS08180 fcfd3b8d6878bcd491faeeaf4f218f08 298 SUPERFAMILY SSF51569 1 296 4.5E-73 T 22-04-2016 VCLMA_RS08180 fcfd3b8d6878bcd491faeeaf4f218f08 298 PANTHER PTHR12128:SF30 2 297 9.8E-150 T 22-04-2016 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 SUPERFAMILY SSF51735 10 260 5.79E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PANTHER PTHR24322 13 32 7.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PANTHER PTHR24322 48 142 7.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PANTHER PTHR24322 158 189 7.3E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 259 3.2E-48 T 22-04-2016 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 261 2.9E-111 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PANTHER PTHR24322:SF513 13 32 7.3E-40 T 22-04-2016 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PANTHER PTHR24322:SF513 48 142 7.3E-40 T 22-04-2016 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PANTHER PTHR24322:SF513 158 189 7.3E-40 T 22-04-2016 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 Gene3D G3DSA:3.40.50.720 3 260 9.5E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 8.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 173 196 8.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 108 128 8.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 88 105 8.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 212 231 8.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VCLMA_RS03760 88ce255ed9ff9851c3cd1ffb5d49c449 262 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 238 257 8.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 VCLMA_RS08230 d170e1083a97830f2d5431d3819c016d 138 Gene3D G3DSA:3.40.140.10 36 137 1.3E-39 T 22-04-2016 VCLMA_RS08230 d170e1083a97830f2d5431d3819c016d 138 SUPERFAMILY SSF102712 53 126 1.44E-6 T 22-04-2016 VCLMA_RS08230 d170e1083a97830f2d5431d3819c016d 138 Pfam PF04002 RadC-like JAB domain 41 137 9.8E-36 T 22-04-2016 IPR025657 RadC-like JAB domain VCLMA_RS08230 d170e1083a97830f2d5431d3819c016d 138 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 108 113 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VCLMA_RS08230 d170e1083a97830f2d5431d3819c016d 138 PANTHER PTHR30471:SF5 20 137 8.2E-56 T 22-04-2016 VCLMA_RS08230 d170e1083a97830f2d5431d3819c016d 138 PANTHER PTHR30471 20 137 8.2E-56 T 22-04-2016 VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 SUPERFAMILY SSF54893 2 100 1.83E-35 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 PANTHER PTHR35805 2 154 1.6E-75 T 22-04-2016 VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 1.8E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 1.5E-18 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 PANTHER PTHR35805:SF1 2 154 1.6E-75 T 22-04-2016 VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.562 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 SUPERFAMILY SSF57825 101 152 1.57E-15 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 Gene3D G3DSA:3.30.70.140 2 99 1.7E-36 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 4.1E-62 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 7.0E-46 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VCLMA_RS11680 294495aa0973f60f45b28fe004b99037 155 Gene3D G3DSA:2.30.30.20 101 152 1.3E-22 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VCLMA_RS08440 dce43e8083edb6b48c121cd83466dc43 105 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 24 100 4.2E-31 T 22-04-2016 IPR011846 Cyd operon protein YbgE VCLMA_RS08440 dce43e8083edb6b48c121cd83466dc43 105 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 12 103 3.2E-42 T 22-04-2016 IPR011846 Cyd operon protein YbgE VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PANTHER PTHR30511 1 361 1.2E-246 T 22-04-2016 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PRINTS PR00992 Alanine racemase signature 155 166 2.4E-72 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PRINTS PR00992 Alanine racemase signature 120 132 2.4E-72 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PRINTS PR00992 Alanine racemase signature 26 42 2.4E-72 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PRINTS PR00992 Alanine racemase signature 339 352 2.4E-72 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PRINTS PR00992 Alanine racemase signature 192 219 2.4E-72 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PRINTS PR00992 Alanine racemase signature 249 264 2.4E-72 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PRINTS PR00992 Alanine racemase signature 287 304 2.4E-72 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PRINTS PR00992 Alanine racemase signature 266 281 2.4E-72 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PRINTS PR00992 Alanine racemase signature 60 78 2.4E-72 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 Hamap MF_01201 Alanine racemase. 1 357 35.634 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.8E-71 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 Gene3D G3DSA:3.20.20.10 10 211 2.0E-73 T 22-04-2016 IPR029066 PLP-binding barrel VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 SMART SM01005 233 357 3.5E-69 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 Gene3D G3DSA:2.40.37.10 212 358 9.8E-58 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 PANTHER PTHR30511:SF4 1 361 1.2E-246 T 22-04-2016 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 SUPERFAMILY SSF50621 227 358 2.65E-48 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 Pfam PF00842 Alanine racemase, C-terminal domain 233 356 1.8E-41 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 TIGRFAM TIGR00492 alr: alanine racemase 3 356 2.1E-130 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS01860 00169fdd68288e8765009faa6d74f2c6 361 SUPERFAMILY SSF51419 8 234 6.54E-71 T 22-04-2016 IPR029066 PLP-binding barrel VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 PANTHER PTHR22939 130 452 5.4E-97 T 22-04-2016 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 227 268 9.8E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 PANTHER PTHR22939:SF78 130 452 5.4E-97 T 22-04-2016 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 SUPERFAMILY SSF50156 196 291 6.7E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 1.2E-139 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 Gene3D G3DSA:2.30.42.10 202 291 9.7E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 Gene3D G3DSA:2.30.42.10 95 183 1.7E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 Pfam PF02163 Peptidase family M50 10 440 1.7E-86 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 SUPERFAMILY SSF50156 91 184 6.18E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 SMART SM00228 115 186 0.044 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS10460 054d0a84439b4eb2bff3c9f9933bd2b0 452 SMART SM00228 212 281 1.0E-4 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 PANTHER PTHR30244:SF1 2 376 3.4E-173 T 22-04-2016 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 PANTHER PTHR30244 2 376 3.4E-173 T 22-04-2016 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 1.4E-41 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 6.8E-25 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 Gene3D G3DSA:1.20.1330.10 279 332 1.6E-59 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 Gene3D G3DSA:1.20.1330.10 55 171 1.6E-59 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 PRINTS PR00207 Flagellin signature 37 54 1.9E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 PRINTS PR00207 Flagellin signature 111 134 1.9E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 PRINTS PR00207 Flagellin signature 76 95 1.9E-27 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 SUPERFAMILY SSF64518 1 376 7.06E-97 T 22-04-2016 VCLMA_RS09885 f83290daa7d682d661662a15e2c1553b 377 Pfam PF07196 Flagellin hook IN motif 194 249 3.9E-11 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 50.665 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 Gene3D G3DSA:3.30.870.10 320 457 2.0E-33 T 22-04-2016 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 SUPERFAMILY SSF56024 69 313 3.92E-51 T 22-04-2016 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 PANTHER PTHR21248:SF9 18 484 3.9E-292 T 22-04-2016 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 Gene3D G3DSA:3.30.870.10 112 317 3.3E-39 T 22-04-2016 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 PANTHER PTHR21248 18 484 3.9E-292 T 22-04-2016 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 SUPERFAMILY SSF56024 273 470 1.48E-46 T 22-04-2016 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 2.8E-7 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 484 1.5E-151 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 Pfam PF13091 PLD-like domain 134 265 3.2E-15 T 22-04-2016 IPR025202 Phospholipase D-like domain VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 Pfam PF13091 PLD-like domain 327 445 5.2E-24 T 22-04-2016 IPR025202 Phospholipase D-like domain VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 SMART SM00155 219 246 3.7E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VCLMA_RS07770 2e1d4811ed13e24386aa05c134fd71c6 484 SMART SM00155 397 424 1.8E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VCLMA_RS02985 63d164d358f2bdfc6115d67390f45c1f 294 PANTHER PTHR12862:SF5 1 276 3.0E-113 T 22-04-2016 VCLMA_RS02985 63d164d358f2bdfc6115d67390f45c1f 294 Gene3D G3DSA:3.30.420.40 1 77 7.7E-5 T 22-04-2016 VCLMA_RS02985 63d164d358f2bdfc6115d67390f45c1f 294 SUPERFAMILY SSF53067 1 111 6.37E-27 T 22-04-2016 VCLMA_RS02985 63d164d358f2bdfc6115d67390f45c1f 294 SUPERFAMILY SSF53067 113 282 1.3E-45 T 22-04-2016 VCLMA_RS02985 63d164d358f2bdfc6115d67390f45c1f 294 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 282 1.9E-53 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VCLMA_RS02985 63d164d358f2bdfc6115d67390f45c1f 294 PANTHER PTHR12862 1 276 3.0E-113 T 22-04-2016 VCLMA_RS02080 69ad80881c8d6794786ab222eac6461f 256 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 23 8.8E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02080 69ad80881c8d6794786ab222eac6461f 256 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02080 69ad80881c8d6794786ab222eac6461f 256 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 21 5.6E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 SUPERFAMILY SSF55545 126 255 8.22E-22 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 217 237 8.8E-51 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 585 602 8.8E-51 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 567 583 8.8E-51 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 349 366 8.8E-51 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 398 416 8.8E-51 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 250 267 8.8E-51 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 420 433 8.8E-51 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PRINTS PR00738 Glycosyl hydrolase family 20 signature 279 300 8.8E-51 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 256 603 5.5E-117 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PANTHER PTHR22600 332 634 1.4E-205 T 22-04-2016 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PANTHER PTHR22600 79 316 1.4E-205 T 22-04-2016 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 Gene3D G3DSA:3.30.379.10 133 248 5.5E-20 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 139 247 1.4E-18 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PANTHER PTHR22600:SF21 332 634 1.4E-205 T 22-04-2016 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 PANTHER PTHR22600:SF21 79 316 1.4E-205 T 22-04-2016 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 Gene3D G3DSA:3.20.20.80 254 633 6.4E-135 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS02980 aca35406594fbf5edf6daa62f931b662 635 SUPERFAMILY SSF51445 256 616 3.16E-127 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 SMART SM00382 50 166 9.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 1.4E-66 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 1.4E-16 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 Gene3D G3DSA:1.10.3710.10 349 447 3.9E-34 T 22-04-2016 VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 SUPERFAMILY SSF52540 11 235 1.83E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 PANTHER PTHR13779 8 449 2.7E-200 T 22-04-2016 VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 Pfam PF16193 AAA C-terminal domain 192 268 1.7E-18 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 Gene3D G3DSA:1.10.8.60 155 235 1.2E-6 T 22-04-2016 VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 Gene3D G3DSA:3.40.50.300 13 154 3.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 SUPERFAMILY SSF48019 253 435 5.33E-72 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 Gene3D G3DSA:1.20.272.10 250 348 9.7E-43 T 22-04-2016 VCLMA_RS05210 07603c7029af2270b19e34a2157017ea 449 PANTHER PTHR13779:SF7 8 449 2.7E-200 T 22-04-2016 VCLMA_RS11700 d0918ca251a9a70ba9b5411f10af65cf 84 SUPERFAMILY SSF82657 4 82 7.98E-28 T 22-04-2016 IPR002634 BolA protein VCLMA_RS11700 d0918ca251a9a70ba9b5411f10af65cf 84 Gene3D G3DSA:3.30.300.90 3 80 8.2E-26 T 22-04-2016 IPR002634 BolA protein VCLMA_RS11700 d0918ca251a9a70ba9b5411f10af65cf 84 Pfam PF01722 BolA-like protein 20 74 5.5E-12 T 22-04-2016 IPR002634 BolA protein VCLMA_RS11700 d0918ca251a9a70ba9b5411f10af65cf 84 PIRSF PIRSF003113 1 83 7.9E-21 T 22-04-2016 IPR002634 BolA protein VCLMA_RS11700 d0918ca251a9a70ba9b5411f10af65cf 84 PANTHER PTHR12735 1 84 2.6E-39 T 22-04-2016 VCLMA_RS11700 d0918ca251a9a70ba9b5411f10af65cf 84 PANTHER PTHR12735:SF24 1 84 2.6E-39 T 22-04-2016 VCLMA_RS03675 186a0f0838603e50e992affb80aeb473 373 SUPERFAMILY SSF102114 105 332 2.09E-13 T 22-04-2016 VCLMA_RS03675 186a0f0838603e50e992affb80aeb473 373 PANTHER PTHR30544:SF5 1 373 7.1E-198 T 22-04-2016 VCLMA_RS03675 186a0f0838603e50e992affb80aeb473 373 Pfam PF04055 Radical SAM superfamily 109 285 2.6E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS03675 186a0f0838603e50e992affb80aeb473 373 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 358 6.0E-160 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS03675 186a0f0838603e50e992affb80aeb473 373 Gene3D G3DSA:3.20.20.70 106 330 9.5E-16 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS03675 186a0f0838603e50e992affb80aeb473 373 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.591 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS03675 186a0f0838603e50e992affb80aeb473 373 PIRSF PIRSF006004 3 366 3.0E-144 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS03675 186a0f0838603e50e992affb80aeb473 373 PANTHER PTHR30544 1 373 7.1E-198 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS03560 2ccf45fbd88d85f8f117fe8750b6595e 201 Gene3D G3DSA:3.40.30.10 4 161 4.6E-62 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS03560 2ccf45fbd88d85f8f117fe8750b6595e 201 Pfam PF00578 AhpC/TSA family 4 139 1.9E-33 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VCLMA_RS03560 2ccf45fbd88d85f8f117fe8750b6595e 201 SUPERFAMILY SSF52833 1 196 2.74E-66 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS03560 2ccf45fbd88d85f8f117fe8750b6595e 201 PANTHER PTHR10681 1 194 5.1E-83 T 22-04-2016 VCLMA_RS03560 2ccf45fbd88d85f8f117fe8750b6595e 201 PIRSF PIRSF000239 1 200 7.8E-59 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 VCLMA_RS03560 2ccf45fbd88d85f8f117fe8750b6595e 201 Gene3D G3DSA:3.30.1020.10 162 196 1.3E-11 T 22-04-2016 VCLMA_RS03560 2ccf45fbd88d85f8f117fe8750b6595e 201 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 8.7E-8 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VCLMA_RS10375 dbd6758e82946961e05d37be18265c9f 243 Gene3D G3DSA:3.40.50.150 72 213 3.6E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS10375 dbd6758e82946961e05d37be18265c9f 243 Pfam PF08241 Methyltransferase domain 70 125 1.4E-8 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VCLMA_RS10375 dbd6758e82946961e05d37be18265c9f 243 PANTHER PTHR10108 72 225 6.4E-94 T 22-04-2016 VCLMA_RS10375 dbd6758e82946961e05d37be18265c9f 243 PANTHER PTHR10108:SF836 72 225 6.4E-94 T 22-04-2016 VCLMA_RS10375 dbd6758e82946961e05d37be18265c9f 243 SUPERFAMILY SSF53335 71 212 1.08E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 Gene3D G3DSA:2.40.50.140 49 117 2.8E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.988 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 SUPERFAMILY SSF52540 90 371 1.75E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.8E-23 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 SMART SM00357 52 118 1.2E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 Gene3D G3DSA:3.40.50.300 132 418 4.4E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 PANTHER PTHR15184 54 141 2.1E-199 T 22-04-2016 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 PANTHER PTHR15184 160 418 2.1E-199 T 22-04-2016 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 SUPERFAMILY SSF68912 1 46 4.71E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 SMART SM00959 5 47 1.3E-18 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 7.8E-18 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 SUPERFAMILY SSF50249 48 125 4.97E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.7E-220 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.9E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 Gene3D G3DSA:1.10.720.10 1 47 2.8E-22 T 22-04-2016 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 SMART SM00382 170 355 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 PANTHER PTHR15184:SF34 54 141 2.1E-199 T 22-04-2016 VCLMA_RS01470 ab9aeab9fc42127464560d19068780d3 419 PANTHER PTHR15184:SF34 160 418 2.1E-199 T 22-04-2016 VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 PIRSF PIRSF001413 1 395 4.5E-167 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 Gene3D G3DSA:3.40.50.1100 96 175 6.6E-22 T 22-04-2016 VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 389 1.4E-196 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 PANTHER PTHR10314 6 393 8.8E-224 T 22-04-2016 VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 375 9.0E-49 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 PANTHER PTHR10314:SF3 6 393 8.8E-224 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 Gene3D G3DSA:3.40.50.1100 176 392 2.5E-94 T 22-04-2016 VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 SUPERFAMILY SSF53686 5 388 1.44E-139 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS05510 48ac50ef50f6ebbe19ddc4f700ee7ada 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.427 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 Gene3D G3DSA:1.10.1020.10 60 156 2.0E-34 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 Gene3D G3DSA:3.40.50.150 1 59 1.9E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 Gene3D G3DSA:3.40.50.150 160 267 1.9E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 PIRSF PIRSF000398 1 275 1.4E-76 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 PANTHER PTHR30481:SF3 2 277 3.7E-128 T 22-04-2016 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 1.1E-96 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 PANTHER PTHR30481 2 277 3.7E-128 T 22-04-2016 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 1.7E-70 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 SUPERFAMILY SSF53335 5 268 1.29E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.1E-17 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 1.1E-17 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 1.1E-17 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VCLMA_RS12235 a1ca903f4e36631d531ac1a1d279ed53 277 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 1.1E-17 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VCLMA_RS11455 87aadd17a0152ffeb7a70abb81bde16c 323 Pfam PF01571 Aminomethyltransferase folate-binding domain 29 134 8.4E-5 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal VCLMA_RS11455 87aadd17a0152ffeb7a70abb81bde16c 323 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 181 245 1.6E-24 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site VCLMA_RS11455 87aadd17a0152ffeb7a70abb81bde16c 323 SUPERFAMILY SSF101790 237 320 1.7E-19 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain VCLMA_RS11455 87aadd17a0152ffeb7a70abb81bde16c 323 PANTHER PTHR22602 1 306 3.6E-66 T 22-04-2016 VCLMA_RS11455 87aadd17a0152ffeb7a70abb81bde16c 323 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 317 43.782 T 22-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VCLMA_RS11455 87aadd17a0152ffeb7a70abb81bde16c 323 Gene3D G3DSA:3.30.70.1400 29 114 4.9E-32 T 22-04-2016 VCLMA_RS11455 87aadd17a0152ffeb7a70abb81bde16c 323 SUPERFAMILY SSF103025 16 235 4.87E-55 T 22-04-2016 VCLMA_RS11455 87aadd17a0152ffeb7a70abb81bde16c 323 PANTHER PTHR22602:SF0 1 306 3.6E-66 T 22-04-2016 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 SMART SM00846 3 152 9.1E-71 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 SUPERFAMILY SSF51735 1 179 5.49E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 PIRSF PIRSF000149 1 331 1.6E-116 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 PANTHER PTHR10836:SF37 1 330 5.9E-231 T 22-04-2016 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 SUPERFAMILY SSF55347 152 314 2.41E-64 T 22-04-2016 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.5E-59 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.4E-28 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 PANTHER PTHR10836 1 330 5.9E-231 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 Gene3D G3DSA:3.40.50.720 3 160 4.2E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 Gene3D G3DSA:3.30.360.10 161 315 1.2E-68 T 22-04-2016 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 2.9E-50 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05025 9f76ca004fd9e12385149cf35b9b21e0 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 2.6E-118 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS02300 93c64149e824e13d22ad1d742b28e932 391 PANTHER PTHR13932 5 391 5.0E-235 T 22-04-2016 VCLMA_RS02300 93c64149e824e13d22ad1d742b28e932 391 Gene3D G3DSA:3.80.30.20 7 241 1.6E-30 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VCLMA_RS02300 93c64149e824e13d22ad1d742b28e932 391 PANTHER PTHR13932:SF7 5 391 5.0E-235 T 22-04-2016 VCLMA_RS02300 93c64149e824e13d22ad1d742b28e932 391 Pfam PF06969 HemN C-terminal domain 314 374 7.5E-10 T 22-04-2016 IPR010723 HemN, C-terminal VCLMA_RS02300 93c64149e824e13d22ad1d742b28e932 391 SUPERFAMILY SSF102114 4 386 5.36E-112 T 22-04-2016 VCLMA_RS02300 93c64149e824e13d22ad1d742b28e932 391 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 378 6.0E-136 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- VCLMA_RS02300 93c64149e824e13d22ad1d742b28e932 391 SMART SM00729 6 227 1.7E-55 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VCLMA_RS02300 93c64149e824e13d22ad1d742b28e932 391 Pfam PF04055 Radical SAM superfamily 11 181 9.7E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS07900 a49473da9a37daebade7d241867d7078 77 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 77 1.7E-39 T 22-04-2016 IPR013468 Conserved hypothetical protein CHP02647 VCLMA_RS07900 a49473da9a37daebade7d241867d7078 77 Pfam PF06146 Phosphate-starvation-inducible E 8 68 2.7E-12 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 Gene3D G3DSA:3.40.630.10 318 376 1.8E-74 T 22-04-2016 VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 Gene3D G3DSA:3.40.630.10 4 189 1.8E-74 T 22-04-2016 VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 SUPERFAMILY SSF55031 181 290 7.92E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 Gene3D G3DSA:3.30.70.360 190 291 2.5E-35 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 SUPERFAMILY SSF53187 6 180 2.51E-66 T 22-04-2016 VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 SUPERFAMILY SSF53187 294 376 2.51E-66 T 22-04-2016 VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 PANTHER PTHR11014:SF106 1 376 1.9E-102 T 22-04-2016 VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 Pfam PF01546 Peptidase family M20/M25/M40 65 373 1.0E-44 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.289 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 Pfam PF07687 Peptidase dimerisation domain 177 284 7.0E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 PANTHER PTHR11014 1 376 1.9E-102 T 22-04-2016 VCLMA_RS09920 ca3283a0826df8c67af70c1f647ca735 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 2.8E-186 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 VCLMA_RS04375 8b809bb48510ad8e1606325f8bc7fa7b 737 Pfam PF02706 Chain length determinant protein 12 196 1.3E-20 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 VCLMA_RS04375 8b809bb48510ad8e1606325f8bc7fa7b 737 Pfam PF13807 G-rich domain on putative tyrosine kinase 397 468 3.7E-10 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain VCLMA_RS04375 8b809bb48510ad8e1606325f8bc7fa7b 737 Pfam PF13614 AAA domain 548 683 3.2E-12 T 22-04-2016 IPR025669 AAA domain VCLMA_RS04375 8b809bb48510ad8e1606325f8bc7fa7b 737 PANTHER PTHR32309:SF13 5 733 3.7E-234 T 22-04-2016 VCLMA_RS04375 8b809bb48510ad8e1606325f8bc7fa7b 737 SUPERFAMILY SSF52540 538 723 4.03E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04375 8b809bb48510ad8e1606325f8bc7fa7b 737 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 520 723 1.4E-45 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 VCLMA_RS04375 8b809bb48510ad8e1606325f8bc7fa7b 737 Gene3D G3DSA:3.40.50.300 538 729 5.7E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04375 8b809bb48510ad8e1606325f8bc7fa7b 737 PANTHER PTHR32309 5 733 3.7E-234 T 22-04-2016 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 TIGRFAM TIGR00115 tig: trigger factor 11 412 2.3E-143 T 22-04-2016 IPR005215 Trigger factor GO:0015031 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 SUPERFAMILY SSF109998 248 430 5.36E-49 T 22-04-2016 IPR027304 Trigger factor/SurA domain VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 SUPERFAMILY SSF54534 90 241 1.79E-36 T 22-04-2016 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 PANTHER PTHR30560 1 430 4.1E-143 T 22-04-2016 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 PANTHER PTHR30560:SF3 1 430 4.1E-143 T 22-04-2016 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 1.8E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 PIRSF PIRSF003095 1 432 2.2E-128 T 22-04-2016 IPR005215 Trigger factor GO:0015031 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 Hamap MF_00303 Trigger factor [tig]. 1 418 21.757 T 22-04-2016 IPR005215 Trigger factor GO:0015031 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 Gene3D G3DSA:1.10.3120.10 216 388 6.6E-61 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 1.8E-39 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 5.7E-44 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 SUPERFAMILY SSF102735 1 130 6.54E-42 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 Gene3D G3DSA:3.30.70.1050 1 118 4.7E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VCLMA_RS08835 7fee7f7075566fb830964c16b7c10044 433 Gene3D G3DSA:3.10.50.40 155 215 8.8E-9 T 22-04-2016 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 SMART SM00091 17 87 0.54 T 22-04-2016 IPR000014 PAS domain VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 SMART SM00091 139 207 0.16 T 22-04-2016 IPR000014 PAS domain VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 SUPERFAMILY SSF58104 232 430 2.35E-52 T 22-04-2016 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 SMART SM00283 239 430 9.7E-21 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 SUPERFAMILY SSF55785 153 252 1.93E-21 T 22-04-2016 IPR000014 PAS domain VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 291 429 2.8E-39 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 SUPERFAMILY SSF55785 29 131 3.32E-24 T 22-04-2016 IPR000014 PAS domain VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 Pfam PF13426 PAS domain 153 253 6.4E-11 T 22-04-2016 IPR000014 PAS domain VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 Pfam PF08447 PAS fold 42 128 4.6E-12 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 PANTHER PTHR24422 2 431 8.8E-269 T 22-04-2016 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 Gene3D G3DSA:3.30.450.20 31 132 1.4E-22 T 22-04-2016 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 Gene3D G3DSA:3.30.450.20 152 248 6.5E-21 T 22-04-2016 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 30 137 2.5E-16 T 22-04-2016 IPR000014 PAS domain VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 148 254 1.4E-14 T 22-04-2016 IPR000014 PAS domain VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 Gene3D G3DSA:1.10.287.950 249 429 8.5E-46 T 22-04-2016 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 PANTHER PTHR24422:SF10 2 431 8.8E-269 T 22-04-2016 VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 SMART SM00086 212 254 0.032 T 22-04-2016 IPR001610 PAC motif VCLMA_RS06630 044b0ce88da8db26532b53507b215a18 432 SMART SM00086 92 134 0.15 T 22-04-2016 IPR001610 PAC motif VCLMA_RS03280 903c14d6c9e638620a01c9cccca494dd 264 PANTHER PTHR30269 1 264 2.2E-128 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VCLMA_RS03280 903c14d6c9e638620a01c9cccca494dd 264 Pfam PF01925 Sulfite exporter TauE/SafE 9 261 3.7E-52 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VCLMA_RS03280 903c14d6c9e638620a01c9cccca494dd 264 PANTHER PTHR30269:SF18 1 264 2.2E-128 T 22-04-2016 VCLMA_RS05585 770c366f4731464ae8a3619f263337bc 254 Gene3D G3DSA:3.40.50.620 65 191 2.4E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS05585 770c366f4731464ae8a3619f263337bc 254 Pfam PF02698 DUF218 domain 72 208 1.4E-20 T 22-04-2016 IPR003848 Domain of unknown function DUF218 VCLMA_RS05585 770c366f4731464ae8a3619f263337bc 254 PANTHER PTHR30336:SF0 14 230 6.0E-108 T 22-04-2016 VCLMA_RS05585 770c366f4731464ae8a3619f263337bc 254 PANTHER PTHR30336 14 230 6.0E-108 T 22-04-2016 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 12 453 4.1E-87 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 Gene3D G3DSA:3.10.580.10 131 262 2.7E-18 T 22-04-2016 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 Gene3D G3DSA:1.25.60.10 13 130 1.0E-27 T 22-04-2016 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 PANTHER PTHR11911:SF99 1 422 1.5E-118 T 22-04-2016 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 Pfam PF03448 MgtE intracellular N domain 36 137 1.6E-26 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 Pfam PF01769 Divalent cation transporter 323 445 1.8E-22 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 Pfam PF00571 CBS domain 213 257 2.6E-4 T 22-04-2016 IPR000644 CBS domain VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 Pfam PF00571 CBS domain 140 195 1.6E-4 T 22-04-2016 IPR000644 CBS domain VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 SUPERFAMILY SSF161093 280 451 4.71E-44 T 22-04-2016 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 SMART SM00924 36 139 3.6E-36 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 Gene3D G3DSA:1.10.357.20 280 451 3.8E-48 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 SUPERFAMILY SSF158791 13 136 2.35E-30 T 22-04-2016 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 SUPERFAMILY SSF54631 138 278 1.52E-28 T 22-04-2016 VCLMA_RS11790 989f0973639f3b878ea16e8a97c78940 453 PANTHER PTHR11911 1 422 1.5E-118 T 22-04-2016 VCLMA_RS10610 aeef4738c661410315092e7630ce0e78 505 SMART SM00267 328 502 1.1E-50 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS10610 aeef4738c661410315092e7630ce0e78 505 PANTHER PTHR10799:SF750 255 503 1.1E-21 T 22-04-2016 VCLMA_RS10610 aeef4738c661410315092e7630ce0e78 505 Pfam PF05228 CHASE4 domain 58 212 3.3E-25 T 22-04-2016 IPR007892 CHASE4 VCLMA_RS10610 aeef4738c661410315092e7630ce0e78 505 Gene3D G3DSA:3.30.70.270 340 501 1.6E-43 T 22-04-2016 VCLMA_RS10610 aeef4738c661410315092e7630ce0e78 505 SUPERFAMILY SSF55073 344 501 1.57E-38 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS10610 aeef4738c661410315092e7630ce0e78 505 PANTHER PTHR10799 255 503 1.1E-21 T 22-04-2016 VCLMA_RS10610 aeef4738c661410315092e7630ce0e78 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 335 502 7.7E-41 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS10610 aeef4738c661410315092e7630ce0e78 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 498 4.4E-39 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS01190 194d1cf611f3adda9077e82b0b5b5f91 250 SUPERFAMILY SSF52540 44 240 1.85E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01190 194d1cf611f3adda9077e82b0b5b5f91 250 Pfam PF00005 ABC transporter 49 180 1.1E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS01190 194d1cf611f3adda9077e82b0b5b5f91 250 Gene3D G3DSA:3.40.50.300 44 242 3.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01190 194d1cf611f3adda9077e82b0b5b5f91 250 Gene3D G3DSA:3.40.50.300 1 12 3.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01190 194d1cf611f3adda9077e82b0b5b5f91 250 PANTHER PTHR24220:SF476 46 248 3.3E-131 T 22-04-2016 VCLMA_RS01190 194d1cf611f3adda9077e82b0b5b5f91 250 PANTHER PTHR24220:SF476 3 15 3.3E-131 T 22-04-2016 VCLMA_RS01190 194d1cf611f3adda9077e82b0b5b5f91 250 PANTHER PTHR24220 46 248 3.3E-131 T 22-04-2016 VCLMA_RS01190 194d1cf611f3adda9077e82b0b5b5f91 250 PANTHER PTHR24220 3 15 3.3E-131 T 22-04-2016 VCLMA_RS01190 194d1cf611f3adda9077e82b0b5b5f91 250 SMART SM00382 58 230 2.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 296 315 1.5E-62 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 463 478 1.5E-62 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 405 423 1.5E-62 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 282 1.5E-62 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 164 183 1.5E-62 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 146 164 1.5E-62 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 427 445 1.5E-62 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 1.5E-62 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 487 504 1.5E-62 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 Pfam PF01019 Gamma-glutamyltranspeptidase 64 579 3.2E-164 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 576 1.8E-137 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 SUPERFAMILY SSF56235 40 583 2.51E-171 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PANTHER PTHR11686 6 583 0.0 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 VCLMA_RS00930 ef66201250774cf4c7de9f39ea99343f 584 PANTHER PTHR11686:SF27 6 583 0.0 T 22-04-2016 VCLMA_RS02885 40f6d28e00ca9e2c1dd802788b85e083 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 261 6.5E-113 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS02885 40f6d28e00ca9e2c1dd802788b85e083 264 PANTHER PTHR20881 1 262 2.9E-190 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS02885 40f6d28e00ca9e2c1dd802788b85e083 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 41.41 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS02885 40f6d28e00ca9e2c1dd802788b85e083 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 2.9E-108 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS02885 40f6d28e00ca9e2c1dd802788b85e083 264 PANTHER PTHR20881:SF3 1 262 2.9E-190 T 22-04-2016 VCLMA_RS02885 40f6d28e00ca9e2c1dd802788b85e083 264 Gene3D G3DSA:3.20.20.60 1 262 2.9E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS02885 40f6d28e00ca9e2c1dd802788b85e083 264 SUPERFAMILY SSF51621 3 262 4.71E-105 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS02885 40f6d28e00ca9e2c1dd802788b85e083 264 PIRSF PIRSF000388 1 264 3.1E-101 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS07875 38d9afb088b7a28d670976af504e1ea1 578 Pfam PF02065 Melibiase 167 351 8.9E-17 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VCLMA_RS07875 38d9afb088b7a28d670976af504e1ea1 578 Gene3D G3DSA:3.20.20.70 188 488 7.4E-52 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS07875 38d9afb088b7a28d670976af504e1ea1 578 SUPERFAMILY SSF51445 190 530 5.73E-80 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS07875 38d9afb088b7a28d670976af504e1ea1 578 PANTHER PTHR22762 147 350 1.8E-29 T 22-04-2016 VCLMA_RS05050 3456cb2844ff0e611ee862d917094213 180 PANTHER PTHR30289 4 177 5.6E-91 T 22-04-2016 VCLMA_RS05050 3456cb2844ff0e611ee862d917094213 180 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 42 177 1.6E-37 T 22-04-2016 IPR005247 YbhB/YbcL VCLMA_RS05050 3456cb2844ff0e611ee862d917094213 180 SUPERFAMILY SSF49777 23 179 6.41E-50 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein VCLMA_RS05050 3456cb2844ff0e611ee862d917094213 180 PANTHER PTHR30289:SF0 4 177 5.6E-91 T 22-04-2016 VCLMA_RS05050 3456cb2844ff0e611ee862d917094213 180 Pfam PF01161 Phosphatidylethanolamine-binding protein 41 177 2.3E-36 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein VCLMA_RS05050 3456cb2844ff0e611ee862d917094213 180 Gene3D G3DSA:3.90.280.10 24 178 2.3E-53 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein VCLMA_RS12740 c6b877c6705d5dd8b552649e6f291c80 305 SUPERFAMILY SSF50156 210 304 6.92E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS12740 c6b877c6705d5dd8b552649e6f291c80 305 PRINTS PR00810 Bacterial general secretion pathway protein C signature 110 119 4.4E-5 T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12740 c6b877c6705d5dd8b552649e6f291c80 305 PRINTS PR00810 Bacterial general secretion pathway protein C signature 259 269 4.4E-5 T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12740 c6b877c6705d5dd8b552649e6f291c80 305 ProSitePatterns PS01141 Bacterial type II secretion system protein C signature. 243 269 - T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12740 c6b877c6705d5dd8b552649e6f291c80 305 Pfam PF11356 Type II secretion system protein C 33 173 6.5E-41 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal VCLMA_RS12740 c6b877c6705d5dd8b552649e6f291c80 305 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 30 305 9.9E-112 T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12740 c6b877c6705d5dd8b552649e6f291c80 305 Gene3D G3DSA:2.30.42.10 218 303 1.4E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 VCLMA_RS12440 bdcd25202af5310eebc647df2d8b6bc9 171 PANTHER PTHR33254 1 171 8.6E-110 T 22-04-2016 VCLMA_RS12440 bdcd25202af5310eebc647df2d8b6bc9 171 Gene3D G3DSA:3.50.30.40 1 158 1.4E-46 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VCLMA_RS12440 bdcd25202af5310eebc647df2d8b6bc9 171 SUPERFAMILY SSF89562 1 161 2.35E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VCLMA_RS12440 bdcd25202af5310eebc647df2d8b6bc9 171 Pfam PF03737 Demethylmenaquinone methyltransferase 6 153 3.2E-37 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VCLMA_RS12440 bdcd25202af5310eebc647df2d8b6bc9 171 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 6.3E-68 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VCLMA_RS12440 bdcd25202af5310eebc647df2d8b6bc9 171 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 159 2.6E-82 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VCLMA_RS12440 bdcd25202af5310eebc647df2d8b6bc9 171 PANTHER PTHR33254:SF7 1 171 8.6E-110 T 22-04-2016 VCLMA_RS12440 bdcd25202af5310eebc647df2d8b6bc9 171 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.99 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VCLMA_RS11735 c6e32285cd28e04215f1cfd9caf7b948 320 Pfam PF01699 Sodium/calcium exchanger protein 176 317 1.0E-29 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VCLMA_RS11735 c6e32285cd28e04215f1cfd9caf7b948 320 Pfam PF01699 Sodium/calcium exchanger protein 6 144 7.1E-27 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 VCLMA_RS11735 c6e32285cd28e04215f1cfd9caf7b948 320 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 4 312 5.4E-84 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VCLMA_RS11735 c6e32285cd28e04215f1cfd9caf7b948 320 PANTHER PTHR10846 5 318 1.4E-88 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 PIRSF PIRSF002162 1 177 2.6E-44 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 Gene3D G3DSA:3.90.930.12 83 177 9.0E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 Gene3D G3DSA:3.90.930.12 2 82 1.6E-29 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 5.5E-74 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 SUPERFAMILY SSF56053 1 82 4.97E-25 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 PANTHER PTHR11655:SF14 1 176 1.8E-87 T 22-04-2016 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 SUPERFAMILY SSF56053 83 177 9.16E-36 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.195 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 PANTHER PTHR11655 1 176 1.8E-87 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 Pfam PF00347 Ribosomal protein L6 11 82 6.1E-21 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS12015 d5deb3c8d71af9a10fd51eae8a509563 177 Pfam PF00347 Ribosomal protein L6 91 164 1.9E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 VCLMA_RS01645 1f63ed0e99b0d06955371d9e9f7ee876 382 Gene3D G3DSA:2.70.70.10 241 381 1.6E-33 T 22-04-2016 VCLMA_RS01645 1f63ed0e99b0d06955371d9e9f7ee876 382 PANTHER PTHR21666:SF213 36 382 5.1E-119 T 22-04-2016 VCLMA_RS01645 1f63ed0e99b0d06955371d9e9f7ee876 382 Pfam PF01551 Peptidase family M23 283 376 8.2E-23 T 22-04-2016 IPR016047 Peptidase M23 VCLMA_RS01645 1f63ed0e99b0d06955371d9e9f7ee876 382 SUPERFAMILY SSF51261 166 380 2.67E-47 T 22-04-2016 IPR011055 Duplicated hybrid motif VCLMA_RS01645 1f63ed0e99b0d06955371d9e9f7ee876 382 PANTHER PTHR21666 36 382 5.1E-119 T 22-04-2016 VCLMA_RS02850 d0e2db2c703fcd95479194eb49846598 203 SUPERFAMILY SSF46689 9 88 7.98E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS02850 d0e2db2c703fcd95479194eb49846598 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 3.8E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS02850 d0e2db2c703fcd95479194eb49846598 203 SUPERFAMILY SSF48498 94 198 1.74E-8 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VCLMA_RS02850 d0e2db2c703fcd95479194eb49846598 203 PANTHER PTHR30055 5 198 1.5E-20 T 22-04-2016 VCLMA_RS02850 d0e2db2c703fcd95479194eb49846598 203 Gene3D G3DSA:1.10.357.10 65 199 4.9E-16 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS02850 d0e2db2c703fcd95479194eb49846598 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 4.5E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS02850 d0e2db2c703fcd95479194eb49846598 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 4.5E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS02850 d0e2db2c703fcd95479194eb49846598 203 Gene3D G3DSA:1.10.10.60 8 64 1.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 381 460 7.5E-26 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 PANTHER PTHR11649 1 167 5.0E-161 T 22-04-2016 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 PANTHER PTHR11649 188 464 5.0E-161 T 22-04-2016 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 SUPERFAMILY SSF52540 4 167 2.47E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.5E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 5.5E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 Gene3D G3DSA:3.40.50.300 202 386 1.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 Gene3D G3DSA:3.40.50.300 3 170 4.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 Hamap MF_00195 GTPase Der [der]. 2 464 39.093 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 Pfam PF01926 50S ribosome-binding GTPase 208 325 1.2E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 Pfam PF01926 50S ribosome-binding GTPase 5 119 6.8E-28 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 PIRSF PIRSF006485 1 469 2.3E-181 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 PANTHER PTHR11649:SF5 1 167 5.0E-161 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 PANTHER PTHR11649:SF5 188 464 5.0E-161 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 SMART SM00382 204 347 0.44 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 SMART SM00382 1 138 2.9 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 SUPERFAMILY SSF52540 203 467 5.95E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 SUPERFAMILY SSF52540 137 167 5.95E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 205 370 8.9E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 1.1E-20 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 Gene3D G3DSA:3.30.300.20 387 463 3.7E-23 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VCLMA_RS03705 5442ffb2e381e30ae7ff4850759707d5 494 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 461 8.1E-181 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 SMART SM00382 164 308 3.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 SMART SM00448 2 114 2.1E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 Gene3D G3DSA:1.10.10.60 370 440 2.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 PANTHER PTHR32071 1 446 3.6E-290 T 22-04-2016 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 Gene3D G3DSA:1.10.8.60 317 369 6.2E-22 T 22-04-2016 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 SUPERFAMILY SSF52540 144 374 1.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 PANTHER PTHR32071:SF11 1 446 3.6E-290 T 22-04-2016 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 SUPERFAMILY SSF52172 2 188 1.17E-36 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 2.7E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 SUPERFAMILY SSF46689 357 439 5.38E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 Gene3D G3DSA:3.40.50.2300 3 135 1.3E-29 T 22-04-2016 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 Gene3D G3DSA:3.40.50.300 143 316 2.6E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 Pfam PF00158 Sigma-54 interaction domain 144 310 9.3E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VCLMA_RS08850 871f612f89fd1ea1b515f077f0132be8 446 Pfam PF00072 Response regulator receiver domain 4 114 9.7E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 SUPERFAMILY SSF52540 1 239 2.18E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 3.4E-209 T 22-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 Gene3D G3DSA:3.40.50.300 1 236 2.2E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 SMART SM00382 30 235 1.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 Gene3D G3DSA:3.30.70.260 237 343 4.2E-31 T 22-04-2016 VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 PANTHER PTHR24220 3 339 2.9E-181 T 22-04-2016 VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 SMART SM00930 265 340 1.2E-27 T 22-04-2016 IPR018449 NIL domain VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 Pfam PF00005 ABC transporter 21 169 2.0E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 SUPERFAMILY SSF55021 248 343 8.58E-25 T 22-04-2016 VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 PANTHER PTHR24220:SF455 3 339 2.9E-181 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 VCLMA_RS04250 f629571c7effd1259f97608da82b7e55 344 Pfam PF09383 NIL domain 268 339 3.9E-20 T 22-04-2016 IPR018449 NIL domain VCLMA_RS12065 a06f7175b099c7582a5efb6f7eed1b69 110 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 6.9E-36 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12065 a06f7175b099c7582a5efb6f7eed1b69 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.2E-49 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VCLMA_RS12065 a06f7175b099c7582a5efb6f7eed1b69 110 Gene3D G3DSA:3.90.470.10 1 109 1.3E-45 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12065 a06f7175b099c7582a5efb6f7eed1b69 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12065 a06f7175b099c7582a5efb6f7eed1b69 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.588 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VCLMA_RS12065 a06f7175b099c7582a5efb6f7eed1b69 110 PANTHER PTHR13501 1 109 7.5E-55 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 VCLMA_RS12065 a06f7175b099c7582a5efb6f7eed1b69 110 SUPERFAMILY SSF54843 1 109 6.15E-45 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS00105 8264277f0c8cf3ad2cf38e1a85b29aae 184 PANTHER PTHR12608 1 184 2.5E-40 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VCLMA_RS00105 8264277f0c8cf3ad2cf38e1a85b29aae 184 Pfam PF01169 Uncharacterized protein family UPF0016 103 178 1.7E-18 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VCLMA_RS00105 8264277f0c8cf3ad2cf38e1a85b29aae 184 Pfam PF01169 Uncharacterized protein family UPF0016 7 80 1.6E-20 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 VCLMA_RS02870 0f7a109acb51e83a5578ce9091f881b4 305 Gene3D G3DSA:3.40.50.300 3 225 7.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02870 0f7a109acb51e83a5578ce9091f881b4 305 PANTHER PTHR24220:SF305 5 300 2.2E-178 T 22-04-2016 VCLMA_RS02870 0f7a109acb51e83a5578ce9091f881b4 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS02870 0f7a109acb51e83a5578ce9091f881b4 305 Pfam PF00005 ABC transporter 20 164 8.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS02870 0f7a109acb51e83a5578ce9091f881b4 305 SUPERFAMILY SSF52540 3 230 6.56E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02870 0f7a109acb51e83a5578ce9091f881b4 305 SMART SM00382 29 212 8.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS02870 0f7a109acb51e83a5578ce9091f881b4 305 PANTHER PTHR24220 5 300 2.2E-178 T 22-04-2016 VCLMA_RS09700 62b33e9e4d6a243c13255f32ddc00cb7 166 SUPERFAMILY SSF54637 11 156 4.35E-24 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS09700 62b33e9e4d6a243c13255f32ddc00cb7 166 Pfam PF14539 Domain of unknown function (DUF4442) 14 151 3.4E-25 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 VCLMA_RS09700 62b33e9e4d6a243c13255f32ddc00cb7 166 Gene3D G3DSA:3.10.129.10 11 157 4.4E-37 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 181 1.0E-27 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 SUPERFAMILY SSF89360 4 100 3.92E-22 T 22-04-2016 IPR000361 FeS cluster biogenesis VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 101 3.6E-12 T 22-04-2016 IPR000361 FeS cluster biogenesis VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 PANTHER PTHR10072:SF37 5 100 6.3E-88 T 22-04-2016 VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 PANTHER PTHR10072:SF37 150 192 6.3E-88 T 22-04-2016 VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 2.5E-95 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 Gene3D G3DSA:2.60.300.12 4 100 5.2E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 SUPERFAMILY SSF117916 98 187 1.83E-22 T 22-04-2016 VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 44.634 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 PANTHER PTHR10072 5 100 6.3E-88 T 22-04-2016 VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 PANTHER PTHR10072 150 192 6.3E-88 T 22-04-2016 VCLMA_RS12670 9c1b35c774f50246c80a34eb70020ad9 195 Pfam PF01106 NifU-like domain 114 179 5.3E-19 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VCLMA_RS08535 88bb662bdaea80dd0a17b10d712533d2 268 SUPERFAMILY SSF56219 1 268 9.42E-87 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS08535 88bb662bdaea80dd0a17b10d712533d2 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 4.4E-100 T 22-04-2016 VCLMA_RS08535 88bb662bdaea80dd0a17b10d712533d2 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 268 1.0E-86 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VCLMA_RS08535 88bb662bdaea80dd0a17b10d712533d2 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VCLMA_RS08535 88bb662bdaea80dd0a17b10d712533d2 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VCLMA_RS08535 88bb662bdaea80dd0a17b10d712533d2 268 PANTHER PTHR22748:SF7 1 268 2.7E-137 T 22-04-2016 VCLMA_RS08535 88bb662bdaea80dd0a17b10d712533d2 268 PANTHER PTHR22748 1 268 2.7E-137 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VCLMA_RS08535 88bb662bdaea80dd0a17b10d712533d2 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 260 1.2E-27 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS08535 88bb662bdaea80dd0a17b10d712533d2 268 Gene3D G3DSA:3.60.10.10 1 268 7.9E-87 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 PANTHER PTHR30154:SF17 3 152 9.2E-101 T 22-04-2016 VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 SMART SM00344 3 112 2.2E-45 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 PANTHER PTHR30154 3 152 9.2E-101 T 22-04-2016 VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 Gene3D G3DSA:1.10.10.10 4 55 3.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 1.9E-21 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 SUPERFAMILY SSF46785 2 61 1.26E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 5.4E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 5.4E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 5.4E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 Gene3D G3DSA:3.30.70.920 56 140 5.5E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 SUPERFAMILY SSF54909 63 152 3.22E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 9.5E-17 T 22-04-2016 VCLMA_RS04990 86381c4fddf99a763556f307e038d208 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VCLMA_RS08225 1275444673db278531c72e3edf727959 58 PANTHER PTHR36154 1 53 3.3E-17 T 22-04-2016 VCLMA_RS08225 1275444673db278531c72e3edf727959 58 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 1.5E-26 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VCLMA_RS06380 fedfae28cfff490405e264a119032472 157 Gene3D G3DSA:3.40.30.10 1 157 5.3E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS06380 fedfae28cfff490405e264a119032472 157 Pfam PF08534 Redoxin 5 154 1.2E-39 T 22-04-2016 IPR013740 Redoxin GO:0016491 VCLMA_RS06380 fedfae28cfff490405e264a119032472 157 PANTHER PTHR10430:SF14 1 157 2.1E-120 T 22-04-2016 VCLMA_RS06380 fedfae28cfff490405e264a119032472 157 PANTHER PTHR10430 1 157 2.1E-120 T 22-04-2016 VCLMA_RS06380 fedfae28cfff490405e264a119032472 157 SUPERFAMILY SSF52833 1 156 7.91E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 3.6E-38 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 276 35.712 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 SUPERFAMILY SSF53223 1 122 5.56E-39 T 22-04-2016 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 SUPERFAMILY SSF51735 123 275 1.5E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 Gene3D G3DSA:3.40.50.720 141 264 2.1E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 2.1E-87 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 276 1.8E-66 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 PANTHER PTHR10025 1 276 1.9E-170 T 22-04-2016 VCLMA_RS08930 b413bf92d8e592aa51d64100beb2a28f 276 Gene3D G3DSA:3.40.192.10 7 140 1.6E-49 T 22-04-2016 VCLMA_RS11705 0820d1501a6c7bb4e9123a4eb5513df5 109 SUPERFAMILY SSF52091 1 97 2.94E-17 T 22-04-2016 IPR002645 STAS domain VCLMA_RS11705 0820d1501a6c7bb4e9123a4eb5513df5 109 Gene3D G3DSA:3.30.750.24 14 96 3.3E-14 T 22-04-2016 IPR002645 STAS domain VCLMA_RS11705 0820d1501a6c7bb4e9123a4eb5513df5 109 PANTHER PTHR35849 1 109 9.7E-56 T 22-04-2016 VCLMA_RS11705 0820d1501a6c7bb4e9123a4eb5513df5 109 PANTHER PTHR35849:SF1 1 109 9.7E-56 T 22-04-2016 VCLMA_RS11705 0820d1501a6c7bb4e9123a4eb5513df5 109 Pfam PF13466 STAS domain 16 92 4.5E-15 T 22-04-2016 IPR002645 STAS domain VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 PANTHER PTHR21600 1 300 5.1E-158 T 22-04-2016 VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 Pfam PF01479 S4 domain 8 52 7.0E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 1.9E-47 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 SMART SM00363 7 64 5.5E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 Gene3D G3DSA:3.10.290.10 7 67 5.6E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 SUPERFAMILY SSF55120 66 227 2.64E-38 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 SUPERFAMILY SSF55174 3 98 3.36E-13 T 22-04-2016 VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 PANTHER PTHR21600:SF24 1 300 5.1E-158 T 22-04-2016 VCLMA_RS10320 f47ccc6241af239dfbea7be306244d17 328 Pfam PF00849 RNA pseudouridylate synthase 67 193 3.1E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS09555 20dfe4242dbe9b1c7b876fff29bb9a8f 198 SUPERFAMILY SSF54593 1 196 2.98E-67 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCLMA_RS09555 20dfe4242dbe9b1c7b876fff29bb9a8f 198 Pfam PF06185 YecM protein 13 196 3.9E-67 T 22-04-2016 IPR010393 Protein of unknown function DUF991 VCLMA_RS09555 20dfe4242dbe9b1c7b876fff29bb9a8f 198 Gene3D G3DSA:3.10.180.10 1 197 1.1E-70 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCLMA_RS09555 20dfe4242dbe9b1c7b876fff29bb9a8f 198 PANTHER PTHR37519:SF1 4 198 2.6E-108 T 22-04-2016 VCLMA_RS09555 20dfe4242dbe9b1c7b876fff29bb9a8f 198 PANTHER PTHR37519 4 198 2.6E-108 T 22-04-2016 VCLMA_RS11715 aa1d85e7d6aec293ba4933ba05be9949 163 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 3.9E-55 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VCLMA_RS11715 aa1d85e7d6aec293ba4933ba05be9949 163 Pfam PF02470 MlaD protein 40 118 2.7E-20 T 22-04-2016 IPR003399 Mce/MlaD VCLMA_RS11715 aa1d85e7d6aec293ba4933ba05be9949 163 PANTHER PTHR33371 1 163 3.2E-47 T 22-04-2016 VCLMA_RS03130 caf7baeb36ad5e39d23917fabd5669df 151 PANTHER PTHR33867:SF1 1 151 2.6E-57 T 22-04-2016 VCLMA_RS03130 caf7baeb36ad5e39d23917fabd5669df 151 PANTHER PTHR33867 1 151 2.6E-57 T 22-04-2016 VCLMA_RS03130 caf7baeb36ad5e39d23917fabd5669df 151 Gene3D G3DSA:3.30.300.70 2 80 1.6E-32 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VCLMA_RS03130 caf7baeb36ad5e39d23917fabd5669df 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.524 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VCLMA_RS03130 caf7baeb36ad5e39d23917fabd5669df 151 Gene3D G3DSA:2.30.30.180 88 148 9.8E-12 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VCLMA_RS03130 caf7baeb36ad5e39d23917fabd5669df 151 SUPERFAMILY SSF75420 2 83 8.37E-26 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal VCLMA_RS03130 caf7baeb36ad5e39d23917fabd5669df 151 SUPERFAMILY SSF74942 84 151 5.1E-17 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal VCLMA_RS03130 caf7baeb36ad5e39d23917fabd5669df 151 Pfam PF02576 Putative ribosome maturation factor RimP 12 147 1.5E-48 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 VCLMA_RS03260 23bd08c51a9b38390b1f6fdf2f2c0d4b 344 PANTHER PTHR11732 1 137 7.0E-213 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VCLMA_RS03260 23bd08c51a9b38390b1f6fdf2f2c0d4b 344 PANTHER PTHR11732 155 344 7.0E-213 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta VCLMA_RS03260 23bd08c51a9b38390b1f6fdf2f2c0d4b 344 PANTHER PTHR11732:SF112 1 137 7.0E-213 T 22-04-2016 VCLMA_RS03260 23bd08c51a9b38390b1f6fdf2f2c0d4b 344 PANTHER PTHR11732:SF112 155 344 7.0E-213 T 22-04-2016 VCLMA_RS03260 23bd08c51a9b38390b1f6fdf2f2c0d4b 344 SUPERFAMILY SSF51430 1 344 2.88E-109 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain VCLMA_RS03260 23bd08c51a9b38390b1f6fdf2f2c0d4b 344 Gene3D G3DSA:3.20.20.100 1 342 1.1E-107 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain VCLMA_RS03260 23bd08c51a9b38390b1f6fdf2f2c0d4b 344 Pfam PF00248 Aldo/keto reductase family 15 335 9.5E-74 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 Gene3D G3DSA:3.40.50.300 224 384 2.0E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 Pfam PF00271 Helicase conserved C-terminal domain 244 351 3.5E-30 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 SMART SM00487 28 234 3.7E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 Gene3D G3DSA:3.40.50.300 7 223 1.7E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 SUPERFAMILY SSF52540 85 363 9.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.429 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 SMART SM00490 270 351 1.9E-32 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 PANTHER PTHR24031 1 437 0.0 T 22-04-2016 VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 Pfam PF00270 DEAD/DEAH box helicase 33 207 1.6E-45 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS01460 80fd39a509c68d41d5d10c03cfe8d8a7 438 PANTHER PTHR24031:SF173 1 437 0.0 T 22-04-2016 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 SUPERFAMILY SSF54719 84 193 9.69E-43 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 PANTHER PTHR11404 1 194 2.7E-109 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 1.4E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.3E-37 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 PIRSF PIRSF000349 1 194 1.7E-83 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.4E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.4E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.4E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.4E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.4E-21 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 PANTHER PTHR11404:SF8 1 194 2.7E-109 T 22-04-2016 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 Gene3D G3DSA:1.10.287.990 20 82 5.6E-24 T 22-04-2016 VCLMA_RS09420 6be63a95966cfa919d4fa2fc491fc771 194 SUPERFAMILY SSF46609 1 84 2.09E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 SUPERFAMILY SSF75620 1 298 1.96E-125 T 22-04-2016 VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 PANTHER PTHR11075 1 297 1.2E-145 T 22-04-2016 VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 Pfam PF03462 PCRF domain 1 153 3.5E-48 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 297 1.8E-149 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 Gene3D G3DSA:3.30.160.20 162 240 2.8E-37 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 179 195 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 Pfam PF00472 RF-1 domain 163 271 5.2E-39 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 Gene3D G3DSA:1.20.58.410 1 50 1.6E-9 T 22-04-2016 VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 SMART SM00937 19 129 4.8E-57 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 VCLMA_RS03240 10fa683f53d364a1ec0d2fb92b47a115 299 PANTHER PTHR11075:SF6 1 297 1.2E-145 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VCLMA_RS01050 af2f84639f8868386838b24578a67536 78 Gene3D G3DSA:2.30.170.40 2 77 6.6E-34 T 22-04-2016 VCLMA_RS01050 af2f84639f8868386838b24578a67536 78 Pfam PF00830 Ribosomal L28 family 3 62 2.4E-24 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 VCLMA_RS01050 af2f84639f8868386838b24578a67536 78 SUPERFAMILY SSF143800 2 76 2.94E-28 T 22-04-2016 VCLMA_RS01050 af2f84639f8868386838b24578a67536 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 1.3E-25 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01050 af2f84639f8868386838b24578a67536 78 PANTHER PTHR13528 1 74 1.4E-33 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 VCLMA_RS01050 af2f84639f8868386838b24578a67536 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.115 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 SUPERFAMILY SSF54211 256 270 3.19E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 SUPERFAMILY SSF54211 304 454 3.19E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 Pfam PF13541 Subunit ChlI of Mg-chelatase 346 431 5.9E-9 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 SMART SM00382 92 245 1.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 Gene3D G3DSA:3.30.230.10 285 454 6.4E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 452 9.4E-223 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 Pfam PF13481 AAA domain 76 223 1.1E-13 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 SUPERFAMILY SSF52540 69 290 1.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 PRINTS PR01874 DNA repair protein radA signature 249 275 1.2E-93 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 PRINTS PR01874 DNA repair protein radA signature 10 34 1.2E-93 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 PRINTS PR01874 DNA repair protein radA signature 84 112 1.2E-93 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 PRINTS PR01874 DNA repair protein radA signature 175 199 1.2E-93 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 PRINTS PR01874 DNA repair protein radA signature 214 242 1.2E-93 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 PRINTS PR01874 DNA repair protein radA signature 125 142 1.2E-93 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 PRINTS PR01874 DNA repair protein radA signature 323 346 1.2E-93 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 PANTHER PTHR32472 3 452 4.2E-221 T 22-04-2016 VCLMA_RS10855 a53f981569046ceaf611b9f83727259c 458 Gene3D G3DSA:3.40.50.300 60 278 4.7E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00030 6edec75b2504d1d587c0440637cba2af 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 16 105 3.0E-47 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VCLMA_RS00030 6edec75b2504d1d587c0440637cba2af 118 SUPERFAMILY SSF54211 4 114 2.23E-30 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS00030 6edec75b2504d1d587c0440637cba2af 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 113 4.8E-26 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VCLMA_RS00030 6edec75b2504d1d587c0440637cba2af 118 Pfam PF00825 Ribonuclease P 6 112 9.6E-32 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VCLMA_RS00030 6edec75b2504d1d587c0440637cba2af 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 16.971 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VCLMA_RS00030 6edec75b2504d1d587c0440637cba2af 118 PANTHER PTHR33992 2 114 1.7E-39 T 22-04-2016 VCLMA_RS00030 6edec75b2504d1d587c0440637cba2af 118 Gene3D G3DSA:3.30.230.10 4 113 2.0E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS03515 3a23b890465d4eb1fa2914c517a620ab 325 Gene3D G3DSA:3.40.190.10 121 263 5.2E-36 T 22-04-2016 VCLMA_RS03515 3a23b890465d4eb1fa2914c517a620ab 325 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 15 305 2.2E-74 T 22-04-2016 IPR011862 Phosphate binding protein GO:0006810 VCLMA_RS03515 3a23b890465d4eb1fa2914c517a620ab 325 Gene3D G3DSA:3.40.190.10 41 118 1.0E-5 T 22-04-2016 VCLMA_RS03515 3a23b890465d4eb1fa2914c517a620ab 325 Gene3D G3DSA:3.40.190.10 264 313 1.0E-5 T 22-04-2016 VCLMA_RS03515 3a23b890465d4eb1fa2914c517a620ab 325 PANTHER PTHR30570:SF5 37 325 1.1E-181 T 22-04-2016 VCLMA_RS03515 3a23b890465d4eb1fa2914c517a620ab 325 PANTHER PTHR30570 37 325 1.1E-181 T 22-04-2016 VCLMA_RS03515 3a23b890465d4eb1fa2914c517a620ab 325 Pfam PF12849 PBP superfamily domain 36 292 2.0E-31 T 22-04-2016 IPR024370 PBP domain VCLMA_RS03515 3a23b890465d4eb1fa2914c517a620ab 325 SUPERFAMILY SSF53850 35 317 1.29E-66 T 22-04-2016 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 Pfam PF00849 RNA pseudouridylate synthase 68 154 6.5E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 SUPERFAMILY SSF55120 68 236 3.06E-42 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 Pfam PF01479 S4 domain 4 36 8.0E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 1.8E-56 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 SUPERFAMILY SSF55174 4 96 3.36E-12 T 22-04-2016 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 SMART SM00363 3 73 4.6E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 PANTHER PTHR21600 1 309 1.8E-101 T 22-04-2016 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 Gene3D G3DSA:3.10.290.10 3 62 3.7E-15 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS05550 25268b637a7ea64bf314205ab246b7ce 321 PANTHER PTHR21600:SF2 1 309 1.8E-101 T 22-04-2016 VCLMA_RS07040 b23590e6e11934562e64eca86268b874 158 Pfam PF11749 Protein of unknown function (DUF3305) 53 148 1.5E-18 T 22-04-2016 IPR021736 Protein of unknown function DUF3305 VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PANTHER PTHR24322 165 196 8.6E-78 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PANTHER PTHR24322 17 149 8.6E-78 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PANTHER PTHR24322:SF337 165 196 8.6E-78 T 22-04-2016 VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PANTHER PTHR24322:SF337 17 149 8.6E-78 T 22-04-2016 VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 2.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 2.6E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 Gene3D G3DSA:3.40.50.720 8 243 1.5E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 SUPERFAMILY SSF51735 9 242 5.03E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04975 1f0cdf66d203a8985db8e5a0512a8d51 247 Pfam PF00106 short chain dehydrogenase 13 209 8.8E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS01275 fdc606eca058d8143a3e24016b7886e6 412 PANTHER PTHR30414:SF0 1 412 2.0E-216 T 22-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 VCLMA_RS01275 fdc606eca058d8143a3e24016b7886e6 412 Pfam PF00924 Mechanosensitive ion channel 143 397 1.9E-52 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VCLMA_RS01275 fdc606eca058d8143a3e24016b7886e6 412 SUPERFAMILY SSF82689 326 394 6.28E-5 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VCLMA_RS01275 fdc606eca058d8143a3e24016b7886e6 412 SUPERFAMILY SSF50182 187 252 1.18E-10 T 22-04-2016 IPR010920 LSM domain VCLMA_RS01275 fdc606eca058d8143a3e24016b7886e6 412 PANTHER PTHR30414 1 412 2.0E-216 T 22-04-2016 VCLMA_RS01275 fdc606eca058d8143a3e24016b7886e6 412 Gene3D G3DSA:2.30.30.60 203 252 3.5E-8 T 22-04-2016 VCLMA_RS00905 0f128611a5c32b2a6ed110c95965b154 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.711 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VCLMA_RS00905 0f128611a5c32b2a6ed110c95965b154 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 241 247 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VCLMA_RS00905 0f128611a5c32b2a6ed110c95965b154 279 Gene3D G3DSA:3.40.50.150 1 279 1.3E-117 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00905 0f128611a5c32b2a6ed110c95965b154 279 PANTHER PTHR37426 2 279 1.2E-162 T 22-04-2016 VCLMA_RS00905 0f128611a5c32b2a6ed110c95965b154 279 PANTHER PTHR37426:SF1 2 279 1.2E-162 T 22-04-2016 VCLMA_RS00905 0f128611a5c32b2a6ed110c95965b154 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 6.9E-121 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VCLMA_RS00905 0f128611a5c32b2a6ed110c95965b154 279 SUPERFAMILY SSF53335 9 275 8.18E-97 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00905 0f128611a5c32b2a6ed110c95965b154 279 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 161 167 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VCLMA_RS08005 60ee22ea0ecbf85207984a60d9e889ec 273 Pfam PF02698 DUF218 domain 80 242 3.0E-29 T 22-04-2016 IPR003848 Domain of unknown function DUF218 VCLMA_RS08005 60ee22ea0ecbf85207984a60d9e889ec 273 Gene3D G3DSA:3.40.50.620 79 210 1.8E-16 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS08005 60ee22ea0ecbf85207984a60d9e889ec 273 PANTHER PTHR30336:SF1 1 271 8.6E-96 T 22-04-2016 VCLMA_RS08005 60ee22ea0ecbf85207984a60d9e889ec 273 PANTHER PTHR30336 1 271 8.6E-96 T 22-04-2016 VCLMA_RS01205 b546717bb2e7f6a89c9e0839e8cddf1c 374 Pfam PF00465 Iron-containing alcohol dehydrogenase 19 366 1.9E-74 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 VCLMA_RS01205 b546717bb2e7f6a89c9e0839e8cddf1c 374 Gene3D G3DSA:3.40.50.1970 21 187 2.1E-33 T 22-04-2016 VCLMA_RS01205 b546717bb2e7f6a89c9e0839e8cddf1c 374 SUPERFAMILY SSF56796 10 373 6.67E-75 T 22-04-2016 VCLMA_RS01205 b546717bb2e7f6a89c9e0839e8cddf1c 374 PANTHER PTHR11496:SF79 21 373 2.9E-120 T 22-04-2016 VCLMA_RS01205 b546717bb2e7f6a89c9e0839e8cddf1c 374 PANTHER PTHR11496 21 373 2.9E-120 T 22-04-2016 VCLMA_RS01205 b546717bb2e7f6a89c9e0839e8cddf1c 374 Gene3D G3DSA:1.20.1090.10 188 374 2.5E-36 T 22-04-2016 VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 338 506 3.4E-33 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 Pfam PF00990 Diguanylate cyclase, GGDEF domain 340 503 9.5E-39 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 PANTHER PTHR10799 737 756 2.6E-151 T 22-04-2016 VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 PANTHER PTHR10799 371 597 2.6E-151 T 22-04-2016 VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 SMART SM00267 328 507 1.3E-46 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 PANTHER PTHR10799:SF686 737 756 2.6E-151 T 22-04-2016 VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 PANTHER PTHR10799:SF686 371 597 2.6E-151 T 22-04-2016 VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 SUPERFAMILY SSF55073 344 508 1.1E-38 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 Pfam PF00672 HAMP domain 262 329 3.5E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 SUPERFAMILY SSF141868 522 768 4.45E-68 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 Gene3D G3DSA:3.20.20.450 521 767 4.9E-70 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 Gene3D G3DSA:3.30.70.270 342 514 4.4E-44 T 22-04-2016 VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 Pfam PF00563 EAL domain 523 755 3.3E-62 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03415 a1bf5120387d0b41fa510f7f42a9865d 791 SMART SM00052 517 760 7.8E-73 T 22-04-2016 IPR001633 EAL domain VCLMA_RS05790 fba68fe59bdb4682cfe6fd78fc2cc407 218 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 216 35.275 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VCLMA_RS05790 fba68fe59bdb4682cfe6fd78fc2cc407 218 PANTHER PTHR10259 1 216 2.3E-124 T 22-04-2016 VCLMA_RS05790 fba68fe59bdb4682cfe6fd78fc2cc407 218 SUPERFAMILY SSF53335 3 214 2.71E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05790 fba68fe59bdb4682cfe6fd78fc2cc407 218 Gene3D G3DSA:3.40.50.150 17 216 6.8E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05790 fba68fe59bdb4682cfe6fd78fc2cc407 218 PANTHER PTHR10259:SF16 1 216 2.3E-124 T 22-04-2016 VCLMA_RS05790 fba68fe59bdb4682cfe6fd78fc2cc407 218 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 2.1E-77 T 22-04-2016 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VCLMA_RS05790 fba68fe59bdb4682cfe6fd78fc2cc407 218 PIRSF PIRSF023956 1 218 6.3E-77 T 22-04-2016 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67 VCLMA_RS05790 fba68fe59bdb4682cfe6fd78fc2cc407 218 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 216 5.2E-82 T 22-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 PANTHER PTHR33751 1 205 1.4E-81 T 22-04-2016 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 Gene3D G3DSA:1.10.760.10 132 203 4.5E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 SUPERFAMILY SSF46626 6 105 5.3E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 SUPERFAMILY SSF46626 114 203 3.2E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 Gene3D G3DSA:1.10.760.10 31 131 6.0E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 PIRSF PIRSF000005 1 205 3.7E-63 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 PANTHER PTHR33751:SF3 1 205 1.4E-81 T 22-04-2016 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 PRINTS PR00605 Class IC cytochrome C signature 79 101 2.2E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 PRINTS PR00605 Class IC cytochrome C signature 30 41 2.2E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 Pfam PF00034 Cytochrome c 117 201 4.4E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00555 2162633f7453fc700e36818e1c9845a5 205 Pfam PF00034 Cytochrome c 31 103 5.6E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS06845 eedbfbf59546dc2549ea098891e62e89 105 PANTHER PTHR33215 5 105 1.7E-67 T 22-04-2016 VCLMA_RS06845 eedbfbf59546dc2549ea098891e62e89 105 Gene3D G3DSA:1.10.10.60 13 96 1.4E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS06845 eedbfbf59546dc2549ea098891e62e89 105 PANTHER PTHR33215:SF4 5 105 1.7E-67 T 22-04-2016 VCLMA_RS06845 eedbfbf59546dc2549ea098891e62e89 105 Pfam PF01527 Transposase 7 81 4.8E-15 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VCLMA_RS06845 eedbfbf59546dc2549ea098891e62e89 105 SUPERFAMILY SSF46689 8 99 5.02E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS09380 f0fe04a189f85c618b92211857a72258 333 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 326 3.9E-99 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VCLMA_RS09380 f0fe04a189f85c618b92211857a72258 333 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 46.356 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VCLMA_RS09380 f0fe04a189f85c618b92211857a72258 333 PANTHER PTHR38772 2 333 1.9E-180 T 22-04-2016 VCLMA_RS02570 8b17fcdcb40cb36186fd274bfbdf2fe9 311 Pfam PF01551 Peptidase family M23 212 306 1.3E-30 T 22-04-2016 IPR016047 Peptidase M23 VCLMA_RS02570 8b17fcdcb40cb36186fd274bfbdf2fe9 311 Gene3D G3DSA:2.70.70.10 178 310 2.0E-40 T 22-04-2016 VCLMA_RS02570 8b17fcdcb40cb36186fd274bfbdf2fe9 311 SUPERFAMILY SSF51261 148 310 2.93E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif VCLMA_RS02570 8b17fcdcb40cb36186fd274bfbdf2fe9 311 Pfam PF01476 LysM domain 48 90 1.1E-9 T 22-04-2016 IPR018392 LysM domain VCLMA_RS02570 8b17fcdcb40cb36186fd274bfbdf2fe9 311 SUPERFAMILY SSF54106 46 91 9.02E-10 T 22-04-2016 IPR018392 LysM domain VCLMA_RS02570 8b17fcdcb40cb36186fd274bfbdf2fe9 311 SMART SM00257 47 91 1.0E-10 T 22-04-2016 IPR018392 LysM domain VCLMA_RS02570 8b17fcdcb40cb36186fd274bfbdf2fe9 311 PANTHER PTHR21666:SF222 193 311 3.0E-52 T 22-04-2016 VCLMA_RS02570 8b17fcdcb40cb36186fd274bfbdf2fe9 311 PANTHER PTHR21666 193 311 3.0E-52 T 22-04-2016 VCLMA_RS02570 8b17fcdcb40cb36186fd274bfbdf2fe9 311 Gene3D G3DSA:3.10.350.10 46 91 5.1E-13 T 22-04-2016 IPR018392 LysM domain VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 SMART SM00861 594 787 3.0E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 Gene3D G3DSA:3.40.50.970 593 790 7.1E-24 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 PANTHER PTHR23152 5 935 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 PIRSF PIRSF000157 1 935 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 9.6E-14 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 PANTHER PTHR23152:SF4 5 935 0.0 T 22-04-2016 VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 Gene3D G3DSA:3.40.50.970 163 555 8.2E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 4.0E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 Pfam PF00676 Dehydrogenase E1 component 223 517 2.0E-49 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 1.9E-54 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 SUPERFAMILY SSF52518 577 794 2.44E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS09620 d93b97d542fcc17cd44049f1078ef886 936 SUPERFAMILY SSF52518 122 532 1.1E-87 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 SMART SM00267 247 413 8.2E-59 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 Gene3D G3DSA:3.30.70.270 258 421 2.5E-53 T 22-04-2016 VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 Pfam PF00563 EAL domain 430 664 3.5E-71 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 SUPERFAMILY SSF55073 261 415 1.18E-46 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 256 409 1.3E-43 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 PANTHER PTHR33121 401 681 7.0E-79 T 22-04-2016 VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 SUPERFAMILY SSF55785 118 203 9.33E-8 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 PANTHER PTHR33121:SF13 401 681 7.0E-79 T 22-04-2016 VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 254 410 1.5E-38 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 SMART SM00052 423 669 1.9E-104 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 Pfam PF08448 PAS fold 18 122 5.2E-7 T 22-04-2016 IPR013656 PAS fold-4 VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 Gene3D G3DSA:3.20.20.450 427 676 4.0E-92 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 SUPERFAMILY SSF55785 16 121 1.18E-10 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 SMART SM00091 134 201 0.35 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 SMART SM00091 11 77 8.2E-5 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 Pfam PF13188 PAS domain 136 181 2.3E-5 T 22-04-2016 IPR000014 PAS domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 SUPERFAMILY SSF141868 430 677 1.31E-84 T 22-04-2016 IPR001633 EAL domain VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 Gene3D G3DSA:3.30.450.20 127 203 1.4E-7 T 22-04-2016 VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 Gene3D G3DSA:3.30.450.20 19 118 2.3E-10 T 22-04-2016 VCLMA_RS03190 8b650621f4032383195b6edb92eac712 684 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 123 2.4E-8 T 22-04-2016 IPR000014 PAS domain VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 SUPERFAMILY SSF56091 28 200 6.04E-36 T 22-04-2016 VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 PANTHER PTHR10459:SF61 44 281 3.2E-95 T 22-04-2016 VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 177 200 - T 22-04-2016 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 Reactome: REACT_216 VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 PANTHER PTHR10459 44 281 3.2E-95 T 22-04-2016 VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 Gene3D G3DSA:2.40.50.140 186 281 5.9E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 Gene3D G3DSA:3.30.1490.70 153 185 5.3E-9 T 22-04-2016 VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 Gene3D G3DSA:3.30.1490.70 43 52 5.3E-9 T 22-04-2016 VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 Pfam PF14743 DNA ligase OB-like domain 215 279 2.4E-28 T 22-04-2016 IPR029319 DNA ligase, OB-like domain VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 SUPERFAMILY SSF50249 174 279 5.08E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS07150 de5a5e5ffc0b3cebf21f99fc4cefe8d3 282 Pfam PF01068 ATP dependent DNA ligase domain 81 200 2.5E-6 T 22-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 VCLMA_RS01210 f709f434604b4b96039d17fb98657470 825 Pfam PF04443 Acyl-protein synthetase, LuxE 1 375 4.1E-215 T 22-04-2016 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723|UniPathway: UPA00569 VCLMA_RS01210 f709f434604b4b96039d17fb98657470 825 Pfam PF05893 Acyl-CoA reductase (LuxC) 423 818 1.1E-139 T 22-04-2016 IPR008670 Acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723|UniPathway: UPA00569 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 SUPERFAMILY SSF54631 95 203 1.04E-24 T 22-04-2016 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 Gene3D G3DSA:3.20.20.70 2 485 2.6E-194 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 SUPERFAMILY SSF51412 217 477 2.22E-122 T 22-04-2016 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 SUPERFAMILY SSF51412 1 90 2.22E-122 T 22-04-2016 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 PANTHER PTHR11911 300 485 1.1E-248 T 22-04-2016 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 PANTHER PTHR11911 1 282 1.1E-248 T 22-04-2016 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 SMART SM01240 7 473 0.0 T 22-04-2016 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 SMART SM00116 158 206 3.9E-6 T 22-04-2016 IPR000644 CBS domain VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 SMART SM00116 96 144 9.8E-10 T 22-04-2016 IPR000644 CBS domain VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.2E-193 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 PIRSF PIRSF000130 1 487 7.8E-199 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 82.613 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 Pfam PF00571 CBS domain 149 201 2.5E-4 T 22-04-2016 IPR000644 CBS domain VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 Pfam PF00571 CBS domain 95 140 3.9E-9 T 22-04-2016 IPR000644 CBS domain VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 PANTHER PTHR11911:SF6 300 485 1.1E-248 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 PANTHER PTHR11911:SF6 1 282 1.1E-248 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 VCLMA_RS03725 9a0503d462e250d20337dad0e00b94bf 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 8.1E-161 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 314 471 3.2E-45 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 SUPERFAMILY SSF55073 323 471 9.42E-45 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 SMART SM00267 307 473 5.2E-52 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 Gene3D G3DSA:3.30.450.20 172 272 1.2E-6 T 22-04-2016 VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 PANTHER PTHR10799:SF750 8 20 3.2E-23 T 22-04-2016 VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 PANTHER PTHR10799:SF750 159 470 3.2E-23 T 22-04-2016 VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 Gene3D G3DSA:3.30.70.270 320 471 8.3E-50 T 22-04-2016 VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 Gene3D G3DSA:3.30.450.20 83 171 4.9E-7 T 22-04-2016 VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 PANTHER PTHR10799 8 20 3.2E-23 T 22-04-2016 VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 PANTHER PTHR10799 159 470 3.2E-23 T 22-04-2016 VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 318 469 3.3E-42 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS10325 9c9644c7c80e8e4ee1edae313cbdaf66 473 Pfam PF02743 Cache domain 39 270 1.5E-14 T 22-04-2016 IPR033479 Double Cache domain 1 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 PANTHER PTHR32248 1 487 6.1E-181 T 22-04-2016 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 Pfam PF04552 Sigma-54, DNA binding domain 327 485 1.5E-73 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 PANTHER PTHR32248:SF4 1 487 6.1E-181 T 22-04-2016 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 Pfam PF04963 Sigma-54 factor, core binding domain 126 315 1.2E-59 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 PRINTS PR00045 Sigma-54 factor signature 198 215 4.3E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 PRINTS PR00045 Sigma-54 factor signature 386 398 4.3E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 PRINTS PR00045 Sigma-54 factor signature 460 478 4.3E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 PRINTS PR00045 Sigma-54 factor signature 402 413 4.3E-30 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 374 393 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 2.0E-17 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 PIRSF PIRSF000774 1 487 1.8E-153 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11765 354c4f7b448943722a48634e8c9f0342 487 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 484 1.4E-156 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS11275 c06b7132a959a088728e5ce30d77c083 208 PANTHER PTHR11839 1 208 6.9E-122 T 22-04-2016 VCLMA_RS11275 c06b7132a959a088728e5ce30d77c083 208 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VCLMA_RS11275 c06b7132a959a088728e5ce30d77c083 208 Pfam PF00293 NUDIX domain 59 175 6.2E-9 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VCLMA_RS11275 c06b7132a959a088728e5ce30d77c083 208 Gene3D G3DSA:3.90.79.10 14 201 1.6E-53 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS11275 c06b7132a959a088728e5ce30d77c083 208 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 7.7E-60 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 VCLMA_RS11275 c06b7132a959a088728e5ce30d77c083 208 PANTHER PTHR11839:SF5 1 208 6.9E-122 T 22-04-2016 VCLMA_RS11275 c06b7132a959a088728e5ce30d77c083 208 SUPERFAMILY SSF55811 2 206 8.51E-46 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS12020 ae1a8c36dede30f90c9f333e24a65300 130 Gene3D G3DSA:3.30.1490.10 74 129 3.8E-28 T 22-04-2016 VCLMA_RS12020 ae1a8c36dede30f90c9f333e24a65300 130 SUPERFAMILY SSF56047 2 129 2.35E-44 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12020 ae1a8c36dede30f90c9f333e24a65300 130 PANTHER PTHR11758 1 130 5.5E-60 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12020 ae1a8c36dede30f90c9f333e24a65300 130 Gene3D G3DSA:3.30.1370.30 2 71 9.6E-26 T 22-04-2016 VCLMA_RS12020 ae1a8c36dede30f90c9f333e24a65300 130 Pfam PF00410 Ribosomal protein S8 5 129 1.7E-47 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12020 ae1a8c36dede30f90c9f333e24a65300 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.287 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12020 ae1a8c36dede30f90c9f333e24a65300 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS07270 e5278799b18b9e1c55c232b0bae5a381 233 PANTHER PTHR24220:SF578 11 231 1.5E-121 T 22-04-2016 VCLMA_RS07270 e5278799b18b9e1c55c232b0bae5a381 233 Gene3D G3DSA:3.40.50.300 8 232 9.0E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07270 e5278799b18b9e1c55c232b0bae5a381 233 Pfam PF00005 ABC transporter 29 177 2.3E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS07270 e5278799b18b9e1c55c232b0bae5a381 233 SMART SM00382 38 232 8.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS07270 e5278799b18b9e1c55c232b0bae5a381 233 SUPERFAMILY SSF52540 9 231 4.54E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07270 e5278799b18b9e1c55c232b0bae5a381 233 PANTHER PTHR24220 11 231 1.5E-121 T 22-04-2016 VCLMA_RS07270 e5278799b18b9e1c55c232b0bae5a381 233 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 Gene3D G3DSA:3.40.1130.10 446 567 4.0E-16 T 22-04-2016 VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 Pfam PF07690 Major Facilitator Superfamily 18 316 1.4E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 Pfam PF01553 Acyltransferase 440 566 4.4E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 PANTHER PTHR10434:SF15 344 619 3.2E-170 T 22-04-2016 VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 PANTHER PTHR10434 344 619 3.2E-170 T 22-04-2016 VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 SMART SM00563 455 569 1.6E-36 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 Gene3D G3DSA:1.20.1250.20 20 205 1.7E-5 T 22-04-2016 VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 Gene3D G3DSA:1.20.1250.20 225 420 5.4E-9 T 22-04-2016 VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 SUPERFAMILY SSF103473 14 423 1.57E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS09025 37ec0c57242ce74241994fc32a977091 623 SUPERFAMILY SSF69593 406 568 5.75E-28 T 22-04-2016 VCLMA_RS01075 501aa3ae9187961307d6a7be510ff38e 345 Gene3D G3DSA:3.40.50.2000 2 142 1.7E-38 T 22-04-2016 VCLMA_RS01075 501aa3ae9187961307d6a7be510ff38e 345 Gene3D G3DSA:3.40.50.2000 171 341 1.3E-25 T 22-04-2016 VCLMA_RS01075 501aa3ae9187961307d6a7be510ff38e 345 PANTHER PTHR30160:SF10 1 329 8.4E-223 T 22-04-2016 VCLMA_RS01075 501aa3ae9187961307d6a7be510ff38e 345 SUPERFAMILY SSF53756 2 341 1.57E-70 T 22-04-2016 VCLMA_RS01075 501aa3ae9187961307d6a7be510ff38e 345 PANTHER PTHR30160 1 329 8.4E-223 T 22-04-2016 VCLMA_RS01075 501aa3ae9187961307d6a7be510ff38e 345 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 309 1.2E-20 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 558 59.491 T 22-04-2016 IPR023017 Transport protein YbjL, putative VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 SUPERFAMILY SSF116726 228 283 5.23E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 PANTHER PTHR30445 3 557 0.0 T 22-04-2016 VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 172 4.1E-30 T 22-04-2016 IPR006512 YidE/YbjL duplication VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 542 8.6E-37 T 22-04-2016 IPR006512 YidE/YbjL duplication VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 Gene3D G3DSA:3.30.70.1450 306 378 7.3E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 SUPERFAMILY SSF116726 292 375 1.83E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 PANTHER PTHR30445:SF4 3 557 0.0 T 22-04-2016 VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF06826 Predicted Permease Membrane Region 387 554 3.6E-43 T 22-04-2016 IPR006512 YidE/YbjL duplication VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF06826 Predicted Permease Membrane Region 17 185 1.9E-37 T 22-04-2016 IPR006512 YidE/YbjL duplication VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF02080 TrkA-C domain 228 279 1.8E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 Pfam PF02080 TrkA-C domain 307 372 7.2E-9 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS05390 9aaaebc383d6cb4cab66885dbbe22b9b 558 Gene3D G3DSA:3.30.70.1450 229 284 5.8E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VCLMA_RS01430 2a5bc4af1cf3d69b880cd15c6118befa 209 SUPERFAMILY SSF53098 25 199 1.78E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS01430 2a5bc4af1cf3d69b880cd15c6118befa 209 Pfam PF00929 Exonuclease 31 193 5.3E-20 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS01430 2a5bc4af1cf3d69b880cd15c6118befa 209 PANTHER PTHR30231 1 205 3.1E-127 T 22-04-2016 VCLMA_RS01430 2a5bc4af1cf3d69b880cd15c6118befa 209 SMART SM00479 29 202 8.1E-22 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS01430 2a5bc4af1cf3d69b880cd15c6118befa 209 PANTHER PTHR30231:SF7 1 205 3.1E-127 T 22-04-2016 VCLMA_RS01430 2a5bc4af1cf3d69b880cd15c6118befa 209 Gene3D G3DSA:3.30.420.10 26 199 2.9E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS08815 e38dd537793165c1f07a62edfd55a182 90 SMART SM00411 1 90 3.9E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS08815 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 5.2E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS08815 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 5.2E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS08815 e38dd537793165c1f07a62edfd55a182 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 5.2E-21 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS08815 e38dd537793165c1f07a62edfd55a182 90 SUPERFAMILY SSF47729 1 90 9.27E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VCLMA_RS08815 e38dd537793165c1f07a62edfd55a182 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VCLMA_RS08815 e38dd537793165c1f07a62edfd55a182 90 PANTHER PTHR33175 1 90 2.0E-44 T 22-04-2016 VCLMA_RS08815 e38dd537793165c1f07a62edfd55a182 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.5E-34 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS08815 e38dd537793165c1f07a62edfd55a182 90 Gene3D G3DSA:4.10.520.10 1 90 8.1E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VCLMA_RS10225 d6efd275cd5e325e39ea31cde08de274 201 PANTHER PTHR36307 1 201 4.2E-47 T 22-04-2016 VCLMA_RS10225 d6efd275cd5e325e39ea31cde08de274 201 Pfam PF13144 Chaperone for flagella basal body P-ring formation 2 199 3.6E-51 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VCLMA_RS10225 d6efd275cd5e325e39ea31cde08de274 201 SMART SM00858 79 141 2.4E-8 T 22-04-2016 IPR013974 SAF domain VCLMA_RS10225 d6efd275cd5e325e39ea31cde08de274 201 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 67 199 1.9E-38 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VCLMA_RS01880 7766b33eab38678accb2d37208c0921c 392 PANTHER PTHR15032 13 389 9.4E-119 T 22-04-2016 VCLMA_RS01880 7766b33eab38678accb2d37208c0921c 392 Pfam PF12706 Beta-lactamase superfamily domain 113 314 2.5E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS01880 7766b33eab38678accb2d37208c0921c 392 PANTHER PTHR15032:SF4 13 389 9.4E-119 T 22-04-2016 VCLMA_RS01880 7766b33eab38678accb2d37208c0921c 392 Gene3D G3DSA:3.60.15.10 58 363 1.2E-89 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS01880 7766b33eab38678accb2d37208c0921c 392 SUPERFAMILY SSF56281 70 329 1.16E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 Gene3D G3DSA:3.40.50.1820 12 281 5.2E-42 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 PANTHER PTHR10992 10 283 1.0E-48 T 22-04-2016 VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 Pfam PF12697 Alpha/beta hydrolase family 30 275 3.4E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 PANTHER PTHR10992:SF699 10 283 1.0E-48 T 22-04-2016 VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 PRINTS PR00412 Epoxide hydrolase signature 34 52 3.7E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 PRINTS PR00412 Epoxide hydrolase signature 100 113 3.7E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 PRINTS PR00412 Epoxide hydrolase signature 258 280 3.7E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 PRINTS PR00412 Epoxide hydrolase signature 114 127 3.7E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 PRINTS PR00412 Epoxide hydrolase signature 56 71 3.7E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 VCLMA_RS09125 9e36481c882c3a98acc5fac3398dd372 284 SUPERFAMILY SSF53474 12 282 2.24E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS12780 fe579fb2e871824844c7b3c64e20bc13 176 Pfam PF13521 AAA domain 4 164 2.6E-35 T 22-04-2016 VCLMA_RS12780 fe579fb2e871824844c7b3c64e20bc13 176 Gene3D G3DSA:3.40.50.300 3 169 1.2E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12780 fe579fb2e871824844c7b3c64e20bc13 176 SUPERFAMILY SSF52540 3 170 2.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01345 4a76bc2c8bdecc84e99465ee316d1624 445 PIRSF PIRSF006060 1 433 1.2E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VCLMA_RS01345 4a76bc2c8bdecc84e99465ee316d1624 445 Pfam PF13520 Amino acid permease 8 421 1.6E-35 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VCLMA_RS01345 4a76bc2c8bdecc84e99465ee316d1624 445 PANTHER PTHR11785:SF332 1 440 7.0E-301 T 22-04-2016 VCLMA_RS01345 4a76bc2c8bdecc84e99465ee316d1624 445 PANTHER PTHR11785 1 440 7.0E-301 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 VCLMA_RS02100 b8bf5b598afac5e58cf178fb6cd78700 296 PANTHER PTHR34138:SF1 1 296 5.0E-86 T 22-04-2016 VCLMA_RS02100 b8bf5b598afac5e58cf178fb6cd78700 296 PIRSF PIRSF038471 2 283 5.1E-79 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VCLMA_RS02100 b8bf5b598afac5e58cf178fb6cd78700 296 Pfam PF04085 rod shape-determining protein MreC 123 269 2.9E-39 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VCLMA_RS02100 b8bf5b598afac5e58cf178fb6cd78700 296 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 273 1.6E-83 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 VCLMA_RS02100 b8bf5b598afac5e58cf178fb6cd78700 296 PANTHER PTHR34138 1 296 5.0E-86 T 22-04-2016 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 SUPERFAMILY SSF53790 12 232 4.19E-86 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 4.7E-102 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 PIRSF PIRSF005917 1 288 2.8E-109 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 PANTHER PTHR21091 12 222 2.0E-92 T 22-04-2016 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 PANTHER PTHR21091:SF18 12 222 2.0E-92 T 22-04-2016 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.5E-27 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 Gene3D G3DSA:3.30.950.10 121 235 5.1E-45 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 Gene3D G3DSA:3.40.1010.10 13 120 2.5E-14 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 VCLMA_RS02845 6405db091e6f61a73177bf093e49c71a 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.372 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS03955 56bf8c859776a3835dae2705cead504f 322 Gene3D G3DSA:1.10.10.60 7 72 1.3E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS03955 56bf8c859776a3835dae2705cead504f 322 Pfam PF13565 Homeodomain-like domain 34 108 2.2E-12 T 22-04-2016 VCLMA_RS03955 56bf8c859776a3835dae2705cead504f 322 SUPERFAMILY SSF53098 132 286 4.55E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS03955 56bf8c859776a3835dae2705cead504f 322 Gene3D G3DSA:3.30.420.10 126 279 4.1E-26 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS03955 56bf8c859776a3835dae2705cead504f 322 SUPERFAMILY SSF46689 6 110 2.51E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS03955 56bf8c859776a3835dae2705cead504f 322 Pfam PF00665 Integrase core domain 132 240 2.3E-21 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 PRINTS PR00690 Adhesin family signature 180 201 2.3E-6 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 PRINTS PR00690 Adhesin family signature 64 81 2.3E-6 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 PRINTS PR00690 Adhesin family signature 51 64 2.3E-6 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 PRINTS PR00691 Adhesin B signature 64 83 2.7E-6 T 22-04-2016 IPR006129 Adhesin B GO:0007155 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 PRINTS PR00691 Adhesin B signature 124 143 2.7E-6 T 22-04-2016 IPR006129 Adhesin B GO:0007155 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 PRINTS PR00691 Adhesin B signature 45 63 2.7E-6 T 22-04-2016 IPR006129 Adhesin B GO:0007155 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 PRINTS PR00691 Adhesin B signature 281 294 2.7E-6 T 22-04-2016 IPR006129 Adhesin B GO:0007155 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 SUPERFAMILY SSF53807 13 292 4.71E-70 T 22-04-2016 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 PANTHER PTHR30477 1 276 1.9E-82 T 22-04-2016 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 Gene3D G3DSA:3.40.50.1980 184 292 1.9E-26 T 22-04-2016 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 287 9.1E-52 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 PANTHER PTHR30477:SF1 1 276 1.9E-82 T 22-04-2016 VCLMA_RS09590 37a86721da548841dea95133af78d978 294 Gene3D G3DSA:3.40.50.1980 13 181 9.7E-43 T 22-04-2016 VCLMA_RS05985 af9c9918f1de5dc0e773272688c7b425 182 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.6E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VCLMA_RS05985 af9c9918f1de5dc0e773272688c7b425 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 30 179 2.4E-73 T 22-04-2016 IPR010275 Protein of unknown function DUF882 VCLMA_RS05985 af9c9918f1de5dc0e773272688c7b425 182 PANTHER PTHR37425 1 182 2.5E-66 T 22-04-2016 VCLMA_RS05985 af9c9918f1de5dc0e773272688c7b425 182 SUPERFAMILY SSF55166 52 179 1.88E-33 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VCLMA_RS05985 af9c9918f1de5dc0e773272688c7b425 182 Gene3D G3DSA:3.30.1380.10 52 180 1.7E-32 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VCLMA_RS05240 ad25442f48a5ba9c5c289a4dc6252292 231 PIRSF PIRSF006755 1 229 4.2E-71 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS05240 ad25442f48a5ba9c5c289a4dc6252292 231 Gene3D G3DSA:3.40.50.300 2 215 1.5E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05240 ad25442f48a5ba9c5c289a4dc6252292 231 SUPERFAMILY SSF52540 1 215 1.83E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05240 ad25442f48a5ba9c5c289a4dc6252292 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 28.416 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS05240 ad25442f48a5ba9c5c289a4dc6252292 231 Pfam PF13500 AAA domain 4 212 5.7E-37 T 22-04-2016 VCLMA_RS05240 ad25442f48a5ba9c5c289a4dc6252292 231 PANTHER PTHR21343:SF13 1 226 1.5E-121 T 22-04-2016 VCLMA_RS05240 ad25442f48a5ba9c5c289a4dc6252292 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 2.6E-52 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 VCLMA_RS05240 ad25442f48a5ba9c5c289a4dc6252292 231 PANTHER PTHR21343 1 226 1.5E-121 T 22-04-2016 VCLMA_RS08090 8e2e093d3a141b098f5babaf6cf59ea4 401 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 57.06 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VCLMA_RS08090 8e2e093d3a141b098f5babaf6cf59ea4 401 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 6.0E-112 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VCLMA_RS08090 8e2e093d3a141b098f5babaf6cf59ea4 401 Gene3D G3DSA:3.40.50.720 40 281 2.5E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS08090 8e2e093d3a141b098f5babaf6cf59ea4 401 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 2.7E-37 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VCLMA_RS08090 8e2e093d3a141b098f5babaf6cf59ea4 401 PANTHER PTHR37480 2 401 1.3E-262 T 22-04-2016 VCLMA_RS08090 8e2e093d3a141b098f5babaf6cf59ea4 401 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 1.6E-30 T 22-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 PANTHER PTHR23309:SF6 7 708 0.0 T 22-04-2016 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 SUPERFAMILY SSF51735 315 495 1.4E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 707 51.968 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 SUPERFAMILY SSF48179 497 606 3.49E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 SUPERFAMILY SSF48179 615 707 1.7E-26 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 619 693 9.7E-6 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 590 5.3E-25 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 PANTHER PTHR23309 7 708 0.0 T 22-04-2016 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 SUPERFAMILY SSF52096 3 305 1.66E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Gene3D G3DSA:3.90.226.10 234 273 5.8E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Gene3D G3DSA:3.90.226.10 3 195 5.8E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Gene3D G3DSA:1.10.1040.10 499 591 1.5E-26 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 707 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 519 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Gene3D G3DSA:1.10.1040.10 624 704 2.4E-21 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Gene3D G3DSA:3.40.50.720 309 498 5.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Pfam PF00378 Enoyl-CoA hydratase/isomerase 26 214 1.7E-37 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 VCLMA_RS04915 3ca9c7ce3a99742fa9ff1d42d00db2dc 708 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 495 8.6E-54 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 VCLMA_RS04815 a7c2971ae1bdf999491fbc0dbeb20f80 81 PANTHER PTHR33359 1 81 1.2E-25 T 22-04-2016 VCLMA_RS04815 a7c2971ae1bdf999491fbc0dbeb20f80 81 Gene3D G3DSA:3.10.20.30 1 81 3.4E-26 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS04815 a7c2971ae1bdf999491fbc0dbeb20f80 81 Pfam PF02597 ThiS family 4 81 1.1E-24 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VCLMA_RS04815 a7c2971ae1bdf999491fbc0dbeb20f80 81 SUPERFAMILY SSF54285 1 81 3.74E-23 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VCLMA_RS04815 a7c2971ae1bdf999491fbc0dbeb20f80 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.9E-22 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 VCLMA_RS11120 bebcfc2a05ba7702552a03c66b9ddcd6 353 Gene3D G3DSA:3.40.50.2000 254 336 4.1E-6 T 22-04-2016 VCLMA_RS11120 bebcfc2a05ba7702552a03c66b9ddcd6 353 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 8.6E-120 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11120 bebcfc2a05ba7702552a03c66b9ddcd6 353 Gene3D G3DSA:3.40.50.2000 1 195 1.0E-75 T 22-04-2016 VCLMA_RS11120 bebcfc2a05ba7702552a03c66b9ddcd6 353 PANTHER PTHR21015:SF22 1 353 6.3E-130 T 22-04-2016 VCLMA_RS11120 bebcfc2a05ba7702552a03c66b9ddcd6 353 PANTHER PTHR21015 1 353 6.3E-130 T 22-04-2016 VCLMA_RS11120 bebcfc2a05ba7702552a03c66b9ddcd6 353 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 3.7E-47 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11120 bebcfc2a05ba7702552a03c66b9ddcd6 353 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 338 2.2E-33 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11120 bebcfc2a05ba7702552a03c66b9ddcd6 353 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.97 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11120 bebcfc2a05ba7702552a03c66b9ddcd6 353 SUPERFAMILY SSF53756 5 351 6.28E-125 T 22-04-2016 VCLMA_RS10925 12a1ee6b22b1f8ce1823b03848dceb2a 183 Pfam PF01814 Hemerythrin HHE cation binding domain 3 135 8.4E-14 T 22-04-2016 IPR012312 Haemerythrin-like VCLMA_RS10925 12a1ee6b22b1f8ce1823b03848dceb2a 183 Gene3D G3DSA:1.20.120.520 2 154 6.5E-16 T 22-04-2016 VCLMA_RS10400 aa78c8b25c03ce3f722426e85abfa91f 174 Pfam PF05870 Phenolic acid decarboxylase (PAD) 8 164 1.5E-80 T 22-04-2016 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 KEGG: 00053+4.1.1.-|KEGG: 00230+4.1.1.-|KEGG: 00261+4.1.1.-|KEGG: 00350+4.1.1.-|KEGG: 00351+4.1.1.-|KEGG: 00360+4.1.1.-|KEGG: 00362+4.1.1.-|KEGG: 00380+4.1.1.-|KEGG: 00620+4.1.1.-|KEGG: 00621+4.1.1.-|KEGG: 00622+4.1.1.-|KEGG: 00624+4.1.1.-|KEGG: 00625+4.1.1.-|KEGG: 00626+4.1.1.-|KEGG: 00940+4.1.1.- VCLMA_RS10400 aa78c8b25c03ce3f722426e85abfa91f 174 SUPERFAMILY SSF50814 2 165 2.53E-68 T 22-04-2016 IPR011038 Calycin-like VCLMA_RS10400 aa78c8b25c03ce3f722426e85abfa91f 174 PIRSF PIRSF011561 1 174 2.3E-92 T 22-04-2016 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 KEGG: 00053+4.1.1.-|KEGG: 00230+4.1.1.-|KEGG: 00261+4.1.1.-|KEGG: 00350+4.1.1.-|KEGG: 00351+4.1.1.-|KEGG: 00360+4.1.1.-|KEGG: 00362+4.1.1.-|KEGG: 00380+4.1.1.-|KEGG: 00620+4.1.1.-|KEGG: 00621+4.1.1.-|KEGG: 00622+4.1.1.-|KEGG: 00624+4.1.1.-|KEGG: 00625+4.1.1.-|KEGG: 00626+4.1.1.-|KEGG: 00940+4.1.1.- VCLMA_RS10400 aa78c8b25c03ce3f722426e85abfa91f 174 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 8 157 8.0E-86 T 22-04-2016 IPR008729 Phenolic acid decarboxylase, bacterial GO:0016831 KEGG: 00053+4.1.1.-|KEGG: 00230+4.1.1.-|KEGG: 00261+4.1.1.-|KEGG: 00350+4.1.1.-|KEGG: 00351+4.1.1.-|KEGG: 00360+4.1.1.-|KEGG: 00362+4.1.1.-|KEGG: 00380+4.1.1.-|KEGG: 00620+4.1.1.-|KEGG: 00621+4.1.1.-|KEGG: 00622+4.1.1.-|KEGG: 00624+4.1.1.-|KEGG: 00625+4.1.1.-|KEGG: 00626+4.1.1.-|KEGG: 00940+4.1.1.- VCLMA_RS10400 aa78c8b25c03ce3f722426e85abfa91f 174 Gene3D G3DSA:2.40.128.20 8 164 5.7E-69 T 22-04-2016 IPR012674 Calycin VCLMA_RS10400 aa78c8b25c03ce3f722426e85abfa91f 174 PANTHER PTHR40087 1 167 4.1E-83 T 22-04-2016 VCLMA_RS10400 aa78c8b25c03ce3f722426e85abfa91f 174 PANTHER PTHR40087:SF1 1 167 4.1E-83 T 22-04-2016 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 Pfam PF01553 Acyltransferase 289 424 7.0E-23 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 PIRSF PIRSF500064 3 808 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 PANTHER PTHR12563:SF14 1 118 0.0 T 22-04-2016 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 PANTHER PTHR12563:SF14 144 773 0.0 T 22-04-2016 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 PANTHER PTHR12563 1 118 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 PANTHER PTHR12563 144 773 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 SMART SM00563 300 427 6.3E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 32.872 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 SUPERFAMILY SSF69593 283 511 8.37E-27 T 22-04-2016 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 PIRSF PIRSF000437 19 808 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VCLMA_RS00480 999146c0bec0ab50e3ea3160db1a0481 808 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 VCLMA_RS10645 f5d356595718b5b48468549a1a395c1a 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 3 207 1.0E-108 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VCLMA_RS10645 f5d356595718b5b48468549a1a395c1a 210 PANTHER PTHR30586 2 210 4.9E-147 T 22-04-2016 VCLMA_RS10645 f5d356595718b5b48468549a1a395c1a 210 PIRSF PIRSF006102 3 210 3.7E-73 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VCLMA_RS10645 f5d356595718b5b48468549a1a395c1a 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 37.043 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VCLMA_RS10645 f5d356595718b5b48468549a1a395c1a 210 PANTHER PTHR30586:SF1 2 210 4.9E-147 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VCLMA_RS10645 f5d356595718b5b48468549a1a395c1a 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 9 195 3.5E-63 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VCLMA_RS02555 0193183144b59d78536886a5f5c09016 361 SUPERFAMILY SSF55120 6 337 1.29E-96 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS02555 0193183144b59d78536886a5f5c09016 361 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 78 91 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS02555 0193183144b59d78536886a5f5c09016 361 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 6 341 28.705 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS02555 0193183144b59d78536886a5f5c09016 361 PANTHER PTHR13326 10 337 1.1E-74 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS02555 0193183144b59d78536886a5f5c09016 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 187 336 6.7E-21 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS02555 0193183144b59d78536886a5f5c09016 361 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 9 171 2.4E-40 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS06970 3675171a000f89e0367d99c4fc698763 277 PANTHER PTHR37296 1 277 4.1E-118 T 22-04-2016 VCLMA_RS06970 3675171a000f89e0367d99c4fc698763 277 SMART SM00316 69 132 6.4 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS06970 3675171a000f89e0367d99c4fc698763 277 SMART SM00316 145 207 2.3 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS06970 3675171a000f89e0367d99c4fc698763 277 SMART SM00316 3 64 21.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS06970 3675171a000f89e0367d99c4fc698763 277 Pfam PF13509 S1 domain 4 64 1.1E-22 T 22-04-2016 VCLMA_RS06970 3675171a000f89e0367d99c4fc698763 277 PIRSF PIRSF012524 1 277 3.4E-107 T 22-04-2016 IPR014464 Conserved virulence factor B VCLMA_RS12490 2bb628aa262ac1d78fbede6b8b5ce228 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS12490 2bb628aa262ac1d78fbede6b8b5ce228 388 PANTHER PTHR11808 7 386 7.2E-176 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS12490 2bb628aa262ac1d78fbede6b8b5ce228 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 2.3E-209 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 VCLMA_RS12490 2bb628aa262ac1d78fbede6b8b5ce228 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 5.3E-133 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS12490 2bb628aa262ac1d78fbede6b8b5ce228 388 Gene3D G3DSA:3.40.640.10 5 247 2.1E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS12490 2bb628aa262ac1d78fbede6b8b5ce228 388 SUPERFAMILY SSF53383 9 381 1.28E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS12490 2bb628aa262ac1d78fbede6b8b5ce228 388 PANTHER PTHR11808:SF15 7 386 7.2E-176 T 22-04-2016 VCLMA_RS12490 2bb628aa262ac1d78fbede6b8b5ce228 388 Gene3D G3DSA:3.90.1150.10 250 382 2.0E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS12490 2bb628aa262ac1d78fbede6b8b5ce228 388 PIRSF PIRSF001434 1 384 9.5E-128 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS03915 2c51e119d9ebe46c00354a72cf1f8091 227 PIRSF PIRSF028137 1 227 1.1E-102 T 22-04-2016 IPR016870 Uncharacterised conserved protein UCP028137, membrane VCLMA_RS08015 2ce5053bffab011b870838347f075b1b 220 SUPERFAMILY SSF89155 9 215 6.41E-52 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VCLMA_RS08015 2ce5053bffab011b870838347f075b1b 220 PANTHER PTHR34227:SF1 1 219 1.9E-109 T 22-04-2016 VCLMA_RS08015 2ce5053bffab011b870838347f075b1b 220 Hamap MF_01150 Chaperone protein TorD [torD]. 4 212 33.736 T 22-04-2016 IPR023069 Chaperone TorD VCLMA_RS08015 2ce5053bffab011b870838347f075b1b 220 PANTHER PTHR34227 1 219 1.9E-109 T 22-04-2016 VCLMA_RS08015 2ce5053bffab011b870838347f075b1b 220 Gene3D G3DSA:1.10.3480.10 2 218 4.8E-52 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VCLMA_RS08015 2ce5053bffab011b870838347f075b1b 220 Pfam PF02613 Nitrate reductase delta subunit 51 183 5.3E-40 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone VCLMA_RS05975 ba914211a4aaaba22df08454d335739b 357 Gene3D G3DSA:2.130.10.10 56 228 9.9E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VCLMA_RS05975 ba914211a4aaaba22df08454d335739b 357 Gene3D G3DSA:2.130.10.10 281 305 9.9E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 VCLMA_RS05975 ba914211a4aaaba22df08454d335739b 357 SUPERFAMILY SSF50969 60 323 6.67E-12 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VCLMA_RS05975 ba914211a4aaaba22df08454d335739b 357 PIRSF PIRSF028101 1 357 1.2E-165 T 22-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VCLMA_RS05975 ba914211a4aaaba22df08454d335739b 357 Pfam PF07433 Protein of unknown function (DUF1513) 64 356 3.4E-113 T 22-04-2016 IPR008311 Uncharacterised conserved protein UCP028101 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 PANTHER PTHR11262 1 105 1.3E-208 T 22-04-2016 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 PANTHER PTHR11262 218 443 1.3E-208 T 22-04-2016 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 2.5E-221 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.125 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 Gene3D G3DSA:1.10.8.10 111 177 1.5E-34 T 22-04-2016 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 Gene3D G3DSA:1.10.8.10 213 243 1.5E-34 T 22-04-2016 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 PANTHER PTHR11262:SF3 1 105 1.3E-208 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 PANTHER PTHR11262:SF3 218 443 1.3E-208 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 100 9.7E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 Gene3D G3DSA:3.40.50.300 3 110 4.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 Gene3D G3DSA:3.40.50.300 245 331 4.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 SMART SM01086 335 429 2.1E-19 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 404 4.5E-5 T 22-04-2016 IPR019489 Clp ATPase, C-terminal VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 174 329 9.0E-43 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 Gene3D G3DSA:1.10.8.60 335 443 4.5E-35 T 22-04-2016 VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 SMART SM00382 49 332 1.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS12450 a5d14eaaa51cd58a49d38943921bccee 443 SUPERFAMILY SSF52540 3 441 2.59E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01130 731c3895ce4ce6778ac597d6e8fc5185 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 105 327 4.9E-17 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VCLMA_RS01130 731c3895ce4ce6778ac597d6e8fc5185 349 PANTHER PTHR30160 4 339 6.3E-141 T 22-04-2016 VCLMA_RS01130 731c3895ce4ce6778ac597d6e8fc5185 349 PANTHER PTHR30160:SF12 4 339 6.3E-141 T 22-04-2016 VCLMA_RS01130 731c3895ce4ce6778ac597d6e8fc5185 349 SUPERFAMILY SSF53756 30 336 3.37E-44 T 22-04-2016 VCLMA_RS01130 731c3895ce4ce6778ac597d6e8fc5185 349 Gene3D G3DSA:3.40.50.2000 190 321 2.4E-18 T 22-04-2016 VCLMA_RS01130 731c3895ce4ce6778ac597d6e8fc5185 349 Gene3D G3DSA:3.40.50.2000 30 173 4.6E-11 T 22-04-2016 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 SUPERFAMILY SSF52402 7 170 1.48E-47 T 22-04-2016 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 PANTHER PTHR11587 6 404 0.0 T 22-04-2016 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 PANTHER PTHR11587:SF6 6 404 0.0 T 22-04-2016 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 Pfam PF00764 Arginosuccinate synthase 10 396 2.0E-143 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 52.061 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 1.3E-133 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 SUPERFAMILY SSF69864 177 402 1.16E-84 T 22-04-2016 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 Gene3D G3DSA:3.90.1260.10 179 403 3.2E-85 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12310 8467cd6761ad3d10ea345cb765519e7b 404 Gene3D G3DSA:3.40.50.620 7 175 1.4E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS07665 6a6427ce1cf1a81f50e077de73763551 587 SUPERFAMILY SSF53850 116 585 3.26E-61 T 22-04-2016 VCLMA_RS07665 6a6427ce1cf1a81f50e077de73763551 587 PANTHER PTHR30290 22 81 4.3E-195 T 22-04-2016 VCLMA_RS07665 6a6427ce1cf1a81f50e077de73763551 587 PANTHER PTHR30290 118 584 4.3E-195 T 22-04-2016 VCLMA_RS07665 6a6427ce1cf1a81f50e077de73763551 587 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 5.8E-32 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VCLMA_RS07665 6a6427ce1cf1a81f50e077de73763551 587 Gene3D G3DSA:3.90.76.10 134 285 5.4E-23 T 22-04-2016 VCLMA_RS07665 6a6427ce1cf1a81f50e077de73763551 587 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 373 4.2E-21 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VCLMA_RS07665 6a6427ce1cf1a81f50e077de73763551 587 PANTHER PTHR30290:SF30 22 81 4.3E-195 T 22-04-2016 VCLMA_RS07665 6a6427ce1cf1a81f50e077de73763551 587 PANTHER PTHR30290:SF30 118 584 4.3E-195 T 22-04-2016 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 Pfam PF00890 FAD binding domain 10 392 4.2E-104 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 Gene3D G3DSA:1.20.58.100 419 522 1.3E-33 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 Gene3D G3DSA:3.90.700.10 244 348 1.8E-38 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 Gene3D G3DSA:3.50.50.60 349 411 6.9E-104 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 Gene3D G3DSA:3.50.50.60 3 243 6.9E-104 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 PANTHER PTHR11632 5 535 1.1E-276 T 22-04-2016 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 SUPERFAMILY SSF51905 356 447 1.45E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 SUPERFAMILY SSF51905 4 255 1.45E-76 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 1.1E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.7E-7 T 22-04-2016 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 2.7E-7 T 22-04-2016 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 SUPERFAMILY SSF46977 426 525 3.27E-31 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 2.7E-213 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 SUPERFAMILY SSF56425 238 353 5.38E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 8.9E-9 T 22-04-2016 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 8.9E-9 T 22-04-2016 VCLMA_RS11440 c9f77965846dde97176bb8bda643f048 535 PANTHER PTHR11632:SF27 5 535 1.1E-276 T 22-04-2016 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 Gene3D G3DSA:3.40.1380.20 332 480 5.7E-40 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 SUPERFAMILY SSF50800 74 169 5.06E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 Gene3D G3DSA:2.40.33.10 77 170 5.0E-28 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 SUPERFAMILY SSF51621 171 346 1.06E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 SUPERFAMILY SSF51621 4 79 1.06E-88 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 223 249 1.3E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 300 318 1.3E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 319 335 1.3E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 190 204 1.3E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 275 299 1.3E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 63 79 1.3E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 PRINTS PR01050 Pyruvate kinase family signature 250 274 1.3E-54 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 PANTHER PTHR11817:SF17 1 480 0.0 T 22-04-2016 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 5.7E-169 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 Pfam PF00224 Pyruvate kinase, barrel domain 6 349 6.3E-131 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 PANTHER PTHR11817 1 480 0.0 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 SUPERFAMILY SSF52935 329 480 7.2E-38 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 478 1.0E-29 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 Gene3D G3DSA:3.20.20.60 6 76 1.3E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS09230 fbb427ba250ee5a00b07e3c0b9775494 481 Gene3D G3DSA:3.20.20.60 172 331 1.3E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS00435 44b6d08a0320fb10bada0fadc6004ad8 201 Pfam PF02036 SCP-2 sterol transfer family 15 111 1.4E-20 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VCLMA_RS00435 44b6d08a0320fb10bada0fadc6004ad8 201 Gene3D G3DSA:3.30.1050.10 24 115 1.0E-5 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VCLMA_RS00435 44b6d08a0320fb10bada0fadc6004ad8 201 PANTHER PTHR38693:SF1 1 200 1.1E-72 T 22-04-2016 VCLMA_RS00435 44b6d08a0320fb10bada0fadc6004ad8 201 PANTHER PTHR38693 1 200 1.1E-72 T 22-04-2016 VCLMA_RS00435 44b6d08a0320fb10bada0fadc6004ad8 201 SUPERFAMILY SSF55718 15 117 5.3E-10 T 22-04-2016 IPR003033 SCP2 sterol-binding domain VCLMA_RS10015 2a5a6119c3cddd82625249017ee20f62 270 Pfam PF13369 Transglutaminase-like superfamily 34 184 7.6E-45 T 22-04-2016 IPR032698 Protein SirB1, N-terminal VCLMA_RS10015 2a5a6119c3cddd82625249017ee20f62 270 Gene3D G3DSA:1.25.40.10 11 48 5.9E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS10015 2a5a6119c3cddd82625249017ee20f62 270 Gene3D G3DSA:1.25.40.10 183 251 5.9E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS10015 2a5a6119c3cddd82625249017ee20f62 270 PANTHER PTHR31350 31 266 4.1E-50 T 22-04-2016 VCLMA_RS10015 2a5a6119c3cddd82625249017ee20f62 270 Pfam PF13371 Tetratricopeptide repeat 187 259 3.8E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS10015 2a5a6119c3cddd82625249017ee20f62 270 SUPERFAMILY SSF48452 190 256 7.59E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS09795 0ff37f14d568d3689c7ec977cf2cb56c 136 Gene3D G3DSA:2.30.330.10 48 136 8.4E-38 T 22-04-2016 VCLMA_RS09795 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.1E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VCLMA_RS09795 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.1E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VCLMA_RS09795 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.1E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VCLMA_RS09795 0ff37f14d568d3689c7ec977cf2cb56c 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.1E-27 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VCLMA_RS09795 0ff37f14d568d3689c7ec977cf2cb56c 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 3.2E-33 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VCLMA_RS09795 0ff37f14d568d3689c7ec977cf2cb56c 136 SUPERFAMILY SSF101801 54 134 6.02E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VCLMA_RS09795 0ff37f14d568d3689c7ec977cf2cb56c 136 PANTHER PTHR22617 1 135 1.7E-36 T 22-04-2016 VCLMA_RS09795 0ff37f14d568d3689c7ec977cf2cb56c 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.8E-24 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 Gene3D G3DSA:1.10.287.80 203 236 2.3E-37 T 22-04-2016 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 Gene3D G3DSA:1.10.287.80 19 60 2.3E-37 T 22-04-2016 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.3E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 1.3E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.3E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 1.3E-36 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 PANTHER PTHR11693 1 288 7.6E-128 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 Gene3D G3DSA:1.10.287.80 237 283 2.2E-30 T 22-04-2016 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 36.5 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 Pfam PF00231 ATP synthase 5 287 3.8E-91 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 Gene3D G3DSA:3.40.1380.10 64 191 2.6E-43 T 22-04-2016 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 2.0E-110 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 VCLMA_RS12950 59fd3f6ada26da864967f02bff1f01b6 288 SUPERFAMILY SSF52943 2 288 4.91E-95 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain VCLMA_RS08740 3d3c0abe4b8959b88955b2ba11dd9dc1 960 Pfam PF01580 FtsK/SpoIIIE family 575 788 8.4E-71 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VCLMA_RS08740 3d3c0abe4b8959b88955b2ba11dd9dc1 960 Gene3D G3DSA:3.40.50.300 549 855 1.3E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08740 3d3c0abe4b8959b88955b2ba11dd9dc1 960 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 199 3.4E-42 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region VCLMA_RS08740 3d3c0abe4b8959b88955b2ba11dd9dc1 960 SUPERFAMILY SSF52540 549 861 1.81E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08740 3d3c0abe4b8959b88955b2ba11dd9dc1 960 PANTHER PTHR22683:SF41 29 955 0.0 T 22-04-2016 VCLMA_RS08740 3d3c0abe4b8959b88955b2ba11dd9dc1 960 Pfam PF09397 Ftsk gamma domain 894 954 1.2E-25 T 22-04-2016 IPR018541 FtsK gamma domain VCLMA_RS08740 3d3c0abe4b8959b88955b2ba11dd9dc1 960 SUPERFAMILY SSF46785 892 955 8.16E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08740 3d3c0abe4b8959b88955b2ba11dd9dc1 960 SMART SM00843 892 957 5.3E-39 T 22-04-2016 IPR018541 FtsK gamma domain VCLMA_RS08740 3d3c0abe4b8959b88955b2ba11dd9dc1 960 PANTHER PTHR22683 29 955 0.0 T 22-04-2016 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 22-04-2016 IPR025505 FHIPEP conserved site VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 694 2.4E-268 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 PANTHER PTHR30161 4 697 0.0 T 22-04-2016 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 PANTHER PTHR30161:SF1 4 697 0.0 T 22-04-2016 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 Pfam PF00771 FHIPEP family 32 687 1.0E-269 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.9E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VCLMA_RS09540 a69b7ea8c407d0f28ff208522e1d7a75 697 PIRSF PIRSF005419 10 697 3.8E-253 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 Pfam PF13437 HlyD family secretion protein 244 325 3.1E-15 T 22-04-2016 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 SUPERFAMILY SSF111369 55 115 4.45E-10 T 22-04-2016 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 Gene3D G3DSA:2.40.50.100 60 93 4.2E-20 T 22-04-2016 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 Gene3D G3DSA:2.40.50.100 242 276 4.2E-20 T 22-04-2016 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 SUPERFAMILY SSF111369 184 294 1.29E-12 T 22-04-2016 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 SUPERFAMILY SSF111369 136 196 2.35E-6 T 22-04-2016 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 PANTHER PTHR30386:SF6 13 375 1.0E-199 T 22-04-2016 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 71 91 2.6E-6 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 256 277 2.6E-6 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 377 2.6E-6 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 Pfam PF13533 Biotin-lipoyl like 62 108 3.1E-11 T 22-04-2016 VCLMA_RS06650 fd9c45fa643212dd0c91e8305f1b7e55 395 PANTHER PTHR30386 13 375 1.0E-199 T 22-04-2016 VCLMA_RS07065 874154049ca6cf51514a32d64597a5e5 271 PANTHER PTHR37945 1 271 1.7E-118 T 22-04-2016 VCLMA_RS07065 874154049ca6cf51514a32d64597a5e5 271 Pfam PF12849 PBP superfamily domain 23 246 1.2E-31 T 22-04-2016 IPR024370 PBP domain VCLMA_RS07065 874154049ca6cf51514a32d64597a5e5 271 Gene3D G3DSA:3.40.190.10 188 270 2.7E-28 T 22-04-2016 VCLMA_RS07065 874154049ca6cf51514a32d64597a5e5 271 SUPERFAMILY SSF53850 27 256 3.4E-33 T 22-04-2016 VCLMA_RS07065 874154049ca6cf51514a32d64597a5e5 271 Gene3D G3DSA:3.40.190.10 16 153 4.4E-47 T 22-04-2016 VCLMA_RS03055 3875801882e51fb1b69821f1d2dcbd0b 366 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 63 358 2.2E-44 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VCLMA_RS03055 3875801882e51fb1b69821f1d2dcbd0b 366 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 73 277 1.7E-22 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCLMA_RS03055 3875801882e51fb1b69821f1d2dcbd0b 366 Gene3D G3DSA:2.40.50.100 82 115 3.4E-14 T 22-04-2016 VCLMA_RS03055 3875801882e51fb1b69821f1d2dcbd0b 366 Gene3D G3DSA:2.40.50.100 176 209 3.4E-14 T 22-04-2016 VCLMA_RS03055 3875801882e51fb1b69821f1d2dcbd0b 366 PANTHER PTHR30469 6 357 1.8E-105 T 22-04-2016 VCLMA_RS03055 3875801882e51fb1b69821f1d2dcbd0b 366 SUPERFAMILY SSF111369 71 284 7.72E-28 T 22-04-2016 VCLMA_RS03055 3875801882e51fb1b69821f1d2dcbd0b 366 PANTHER PTHR30469:SF15 6 357 1.8E-105 T 22-04-2016 VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 22-04-2016 IPR033135 ClpP, histidine active site VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 2.3E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 15 205 3.6E-107 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 Gene3D G3DSA:3.90.226.10 16 205 3.5E-93 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 PANTHER PTHR10381:SF22 12 206 1.7E-141 T 22-04-2016 VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.537 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 SUPERFAMILY SSF52096 23 206 1.04E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 Pfam PF00574 Clp protease 25 205 5.8E-90 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 22-04-2016 IPR018215 ClpP, Ser active site VCLMA_RS08830 b1ce59d5427353110a674f4a4047e7d7 208 PANTHER PTHR10381 12 206 1.7E-141 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VCLMA_RS06685 a6f409278470c3178e6b40af8ad8d6fc 212 PANTHER PTHR30086 1 212 1.4E-104 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS06685 a6f409278470c3178e6b40af8ad8d6fc 212 PANTHER PTHR30086:SF2 1 212 1.4E-104 T 22-04-2016 VCLMA_RS06685 a6f409278470c3178e6b40af8ad8d6fc 212 Pfam PF01810 LysE type translocator 15 208 4.8E-32 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS06685 a6f409278470c3178e6b40af8ad8d6fc 212 PIRSF PIRSF006324 1 210 4.8E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 Pfam PF02153 Prephenate dehydrogenase 134 343 3.4E-31 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 SUPERFAMILY SSF48179 241 366 2.04E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 Gene3D G3DSA:1.10.3660.10 249 373 2.2E-54 T 22-04-2016 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 SMART SM00830 9 89 9.7E-29 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 SUPERFAMILY SSF51735 91 237 1.54E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 PANTHER PTHR21363 88 370 1.1E-74 T 22-04-2016 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 SUPERFAMILY SSF48600 4 88 2.38E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 Pfam PF01817 Chorismate mutase type II 9 87 1.5E-20 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 Gene3D G3DSA:1.20.59.10 4 83 1.3E-22 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 Gene3D G3DSA:3.40.50.720 84 247 4.1E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 PIRSF PIRSF001499 1 374 4.0E-176 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 PANTHER PTHR21363:SF0 88 370 1.1E-74 T 22-04-2016 VCLMA_RS03385 64778f2b5cb8b11ac355b5b5698cb375 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.3E-41 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 VCLMA_RS15690 8216f4611534a6ba3f3f48e66bdf20c1 145 PANTHER PTHR38038 1 143 1.4E-52 T 22-04-2016 VCLMA_RS15690 8216f4611534a6ba3f3f48e66bdf20c1 145 Pfam PF04348 LppC putative lipoprotein 3 144 4.8E-60 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA VCLMA_RS15690 8216f4611534a6ba3f3f48e66bdf20c1 145 PANTHER PTHR38038:SF1 1 143 1.4E-52 T 22-04-2016 VCLMA_RS15690 8216f4611534a6ba3f3f48e66bdf20c1 145 Gene3D G3DSA:3.40.50.2300 1 85 1.2E-24 T 22-04-2016 VCLMA_RS15690 8216f4611534a6ba3f3f48e66bdf20c1 145 SUPERFAMILY SSF53822 2 143 9.18E-28 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS08545 896d6cd96a6b9a729319970812271113 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 7.8E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS08545 896d6cd96a6b9a729319970812271113 246 PANTHER PTHR30133 3 246 6.9E-181 T 22-04-2016 VCLMA_RS08545 896d6cd96a6b9a729319970812271113 246 SUPERFAMILY SSF161098 110 227 1.09E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS08545 896d6cd96a6b9a729319970812271113 246 SUPERFAMILY SSF161098 11 78 1.09E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS08545 896d6cd96a6b9a729319970812271113 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 6.7E-16 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VCLMA_RS08545 896d6cd96a6b9a729319970812271113 246 PANTHER PTHR30133:SF3 3 246 6.9E-181 T 22-04-2016 VCLMA_RS08545 896d6cd96a6b9a729319970812271113 246 Gene3D G3DSA:1.10.3720.10 8 81 9.5E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS08545 896d6cd96a6b9a729319970812271113 246 Gene3D G3DSA:1.10.3720.10 113 241 9.5E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 Gene3D G3DSA:3.40.440.10 196 266 1.3E-71 T 22-04-2016 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 Gene3D G3DSA:3.40.440.10 4 94 1.3E-71 T 22-04-2016 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 PANTHER PTHR11846 1 429 4.5E-264 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 Gene3D G3DSA:1.10.300.10 103 195 1.4E-38 T 22-04-2016 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 SUPERFAMILY SSF52540 3 430 6.48E-183 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 Pfam PF00709 Adenylosuccinate synthetase 5 424 5.9E-180 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 Gene3D G3DSA:3.90.170.10 267 425 4.1E-68 T 22-04-2016 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 425 8.3E-195 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 221.069 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VCLMA_RS12120 816ea85d0cca2691e7242e36cf3fe253 432 SMART SM00788 4 425 0.0 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 PANTHER PTHR24423 2 266 7.3E-179 T 22-04-2016 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 PANTHER PTHR24423 282 348 7.3E-179 T 22-04-2016 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 SUPERFAMILY SSF55874 197 347 7.86E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 1.4E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 SMART SM00388 129 194 1.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 Pfam PF00989 PAS fold 7 102 2.0E-15 T 22-04-2016 IPR013767 PAS fold GO:0006355 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 Gene3D G3DSA:1.10.287.130 124 186 3.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 190 2.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 SMART SM00091 4 72 5.2E-6 T 22-04-2016 IPR000014 PAS domain VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 PANTHER PTHR24423:SF488 2 266 7.3E-179 T 22-04-2016 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 PANTHER PTHR24423:SF488 282 348 7.3E-179 T 22-04-2016 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 SUPERFAMILY SSF55785 17 121 4.19E-8 T 22-04-2016 IPR000014 PAS domain VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 Gene3D G3DSA:3.30.565.10 194 348 5.7E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 SUPERFAMILY SSF47384 125 192 4.51E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 Gene3D G3DSA:3.30.450.20 3 109 1.3E-26 T 22-04-2016 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 1.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 1.8E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS12805 acd9d97059fa9e859373ef2d51261985 352 SMART SM00387 233 350 2.7E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS04215 0ea44fdbe83a9882e34b053d70038475 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 361 514 5.0E-36 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS04215 0ea44fdbe83a9882e34b053d70038475 521 SUPERFAMILY SSF55073 366 519 1.02E-36 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS04215 0ea44fdbe83a9882e34b053d70038475 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 360 518 1.3E-36 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS04215 0ea44fdbe83a9882e34b053d70038475 521 Gene3D G3DSA:3.30.70.270 363 519 8.3E-41 T 22-04-2016 VCLMA_RS04215 0ea44fdbe83a9882e34b053d70038475 521 SMART SM00267 351 521 3.0E-37 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PANTHER PTHR30555:SF0 1 723 0.0 T 22-04-2016 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 SUPERFAMILY SSF48113 432 723 6.22E-115 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 11 724 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Gene3D G3DSA:1.10.520.10 702 723 8.9E-57 T 22-04-2016 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Gene3D G3DSA:1.10.520.10 239 251 1.7E-78 T 22-04-2016 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Gene3D G3DSA:1.10.520.10 47 201 1.7E-78 T 22-04-2016 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Gene3D G3DSA:1.10.520.10 434 578 8.9E-57 T 22-04-2016 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00458 Haem peroxidase superfamily signature 168 180 7.8E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 7.8E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00458 Haem peroxidase superfamily signature 90 104 7.8E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 7.8E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00458 Haem peroxidase superfamily signature 150 167 7.8E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 478 504 6.0E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 6.0E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 67 92 6.0E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 52 65 6.0E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 26 48 6.0E-54 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 ProSitePatterns PS00436 Peroxidases active site signature. 90 101 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 SUPERFAMILY SSF48113 19 430 6.78E-155 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Gene3D G3DSA:1.10.420.10 579 699 8.1E-47 T 22-04-2016 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 PANTHER PTHR30555 1 723 0.0 T 22-04-2016 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Pfam PF00141 Peroxidase 70 397 8.8E-51 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Pfam PF00141 Peroxidase 406 698 4.9E-36 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Gene3D G3DSA:1.10.420.10 310 409 6.3E-47 T 22-04-2016 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Gene3D G3DSA:1.10.420.10 252 274 6.3E-47 T 22-04-2016 VCLMA_RS07235 92f922fd008d84f6a4c9f92ba6c494f5 724 Hamap MF_01961 Catalase-peroxidase [katG]. 7 724 40.61 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 VCLMA_RS14000 1e064ada8a24082f995f4bfd160e825d 359 PANTHER PTHR37422 1 359 1.5E-137 T 22-04-2016 VCLMA_RS14000 1e064ada8a24082f995f4bfd160e825d 359 Pfam PF04932 O-Antigen ligase 164 320 2.0E-17 T 22-04-2016 IPR007016 O-antigen ligase-related VCLMA_RS14000 1e064ada8a24082f995f4bfd160e825d 359 PANTHER PTHR37422:SF2 1 359 1.5E-137 T 22-04-2016 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 SMART SM00283 361 622 9.1E-77 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 SUPERFAMILY SSF103190 98 184 1.78E-17 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 Gene3D G3DSA:1.10.287.950 375 593 1.7E-57 T 22-04-2016 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 619 3.9E-48 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 Pfam PF02743 Cache domain 33 254 5.3E-31 T 22-04-2016 IPR033479 Double Cache domain 1 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 PANTHER PTHR32089 3 623 3.8E-277 T 22-04-2016 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 SUPERFAMILY SSF58104 314 621 4.97E-75 T 22-04-2016 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 Pfam PF00672 HAMP domain 273 342 2.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 Gene3D G3DSA:3.30.450.20 139 269 2.0E-32 T 22-04-2016 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 SMART SM00304 292 346 1.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS09955 e1b24f5b92840177d17b3912b71d264f 623 PANTHER PTHR32089:SF64 3 623 3.8E-277 T 22-04-2016 VCLMA_RS12990 d54489ade848ce71cb9f78d66f1553ea 257 PANTHER PTHR13696:SF52 2 254 3.5E-90 T 22-04-2016 VCLMA_RS12990 d54489ade848ce71cb9f78d66f1553ea 257 Gene3D G3DSA:3.40.50.300 3 254 9.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12990 d54489ade848ce71cb9f78d66f1553ea 257 SUPERFAMILY SSF52540 2 253 4.37E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12990 d54489ade848ce71cb9f78d66f1553ea 257 Pfam PF13614 AAA domain 2 178 1.9E-62 T 22-04-2016 IPR025669 AAA domain VCLMA_RS12990 d54489ade848ce71cb9f78d66f1553ea 257 PANTHER PTHR13696 2 254 3.5E-90 T 22-04-2016 VCLMA_RS11035 4cdd3db68a8f2c5c4e77dbbf88d8b5ce 206 PANTHER PTHR30506 1 206 1.2E-95 T 22-04-2016 VCLMA_RS11035 4cdd3db68a8f2c5c4e77dbbf88d8b5ce 206 PANTHER PTHR30506:SF3 1 206 1.2E-95 T 22-04-2016 VCLMA_RS11035 4cdd3db68a8f2c5c4e77dbbf88d8b5ce 206 Pfam PF03458 UPF0126 domain 8 81 3.7E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VCLMA_RS11035 4cdd3db68a8f2c5c4e77dbbf88d8b5ce 206 Pfam PF03458 UPF0126 domain 95 165 6.5E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VCLMA_RS05690 5c800c496a8d7a75779fe6a25da8639d 106 SUPERFAMILY SSF102816 3 105 3.92E-47 T 22-04-2016 IPR007376 dsDNA mimic, putative VCLMA_RS05690 5c800c496a8d7a75779fe6a25da8639d 106 Gene3D G3DSA:3.10.450.140 6 105 3.7E-45 T 22-04-2016 IPR007376 dsDNA mimic, putative VCLMA_RS05690 5c800c496a8d7a75779fe6a25da8639d 106 PIRSF PIRSF004916 1 105 7.2E-54 T 22-04-2016 IPR007376 dsDNA mimic, putative VCLMA_RS05690 5c800c496a8d7a75779fe6a25da8639d 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 35.826 T 22-04-2016 IPR007376 dsDNA mimic, putative VCLMA_RS05690 5c800c496a8d7a75779fe6a25da8639d 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-41 T 22-04-2016 IPR007376 dsDNA mimic, putative VCLMA_RS05690 5c800c496a8d7a75779fe6a25da8639d 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 1.2E-44 T 22-04-2016 IPR007376 dsDNA mimic, putative VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 10 508 9.5E-251 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 SUPERFAMILY SSF53686 10 360 5.89E-106 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 SUPERFAMILY SSF55021 415 508 2.08E-26 T 22-04-2016 VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 Gene3D G3DSA:3.40.50.1100 76 329 3.6E-82 T 22-04-2016 VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 PANTHER PTHR10314 4 363 3.4E-203 T 22-04-2016 VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 PANTHER PTHR10314:SF30 4 363 3.4E-203 T 22-04-2016 VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 Gene3D G3DSA:3.40.1020.10 336 508 5.5E-54 T 22-04-2016 VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 420 508 2.6E-24 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 324 414 1.0E-23 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 311 1.6E-82 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VCLMA_RS00130 4b591af67e2ffb6bbd69d2f495546569 510 SUPERFAMILY SSF55021 332 418 3.2E-27 T 22-04-2016 VCLMA_RS08175 89b5efcbe438e03cf6464143c65f2aa6 278 Gene3D G3DSA:3.40.50.10490 69 253 2.4E-28 T 22-04-2016 VCLMA_RS08175 89b5efcbe438e03cf6464143c65f2aa6 278 SUPERFAMILY SSF53697 103 265 4.29E-31 T 22-04-2016 VCLMA_RS08175 89b5efcbe438e03cf6464143c65f2aa6 278 PANTHER PTHR30514 6 251 1.1E-82 T 22-04-2016 VCLMA_RS08175 89b5efcbe438e03cf6464143c65f2aa6 278 Gene3D G3DSA:1.10.10.10 5 68 7.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08175 89b5efcbe438e03cf6464143c65f2aa6 278 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 81 3.6E-19 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VCLMA_RS08175 89b5efcbe438e03cf6464143c65f2aa6 278 PANTHER PTHR30514:SF1 6 251 1.1E-82 T 22-04-2016 VCLMA_RS08175 89b5efcbe438e03cf6464143c65f2aa6 278 SUPERFAMILY SSF46689 5 80 2.15E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08175 89b5efcbe438e03cf6464143c65f2aa6 278 Pfam PF01380 SIS domain 128 251 6.6E-16 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS04295 d56a362d1c1d445d2c0d0195427bce72 352 PANTHER PTHR30469:SF13 1 350 1.4E-259 T 22-04-2016 VCLMA_RS04295 d56a362d1c1d445d2c0d0195427bce72 352 Gene3D G3DSA:2.40.50.100 153 184 1.8E-15 T 22-04-2016 VCLMA_RS04295 d56a362d1c1d445d2c0d0195427bce72 352 Gene3D G3DSA:2.40.50.100 59 92 1.8E-15 T 22-04-2016 VCLMA_RS04295 d56a362d1c1d445d2c0d0195427bce72 352 PANTHER PTHR30469 1 350 1.4E-259 T 22-04-2016 VCLMA_RS04295 d56a362d1c1d445d2c0d0195427bce72 352 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 258 1.7E-30 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCLMA_RS04295 d56a362d1c1d445d2c0d0195427bce72 352 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 339 4.1E-97 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VCLMA_RS04295 d56a362d1c1d445d2c0d0195427bce72 352 SUPERFAMILY SSF111369 48 264 5.23E-38 T 22-04-2016 VCLMA_RS04980 105269b6450f67a5ed8659922da138c2 353 PANTHER PTHR33209:SF2 1 353 3.4E-210 T 22-04-2016 VCLMA_RS04980 105269b6450f67a5ed8659922da138c2 353 SUPERFAMILY SSF52096 103 213 3.8E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS04980 105269b6450f67a5ed8659922da138c2 353 SUPERFAMILY SSF52096 244 303 3.8E-29 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS04980 105269b6450f67a5ed8659922da138c2 353 PANTHER PTHR33209 1 353 3.4E-210 T 22-04-2016 VCLMA_RS04980 105269b6450f67a5ed8659922da138c2 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 9.0E-55 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VCLMA_RS04980 105269b6450f67a5ed8659922da138c2 353 Pfam PF01343 Peptidase family S49 165 313 5.4E-48 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VCLMA_RS04980 105269b6450f67a5ed8659922da138c2 353 Gene3D G3DSA:3.90.226.10 102 209 2.7E-35 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS04980 105269b6450f67a5ed8659922da138c2 353 Gene3D G3DSA:3.90.226.10 275 310 2.7E-35 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 Pfam PF00675 Insulinase (Peptidase family M16) 63 179 5.8E-18 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 Pfam PF00675 Insulinase (Peptidase family M16) 539 653 3.6E-10 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 SUPERFAMILY SSF63411 737 942 8.61E-39 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 Gene3D G3DSA:3.30.830.10 747 929 2.5E-23 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 Gene3D G3DSA:3.30.830.10 281 460 1.5E-19 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 SUPERFAMILY SSF63411 49 258 7.0E-55 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 Gene3D G3DSA:3.30.830.10 50 268 4.5E-58 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 Gene3D G3DSA:3.30.830.10 521 733 3.4E-44 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 Pfam PF05193 Peptidase M16 inactive domain 219 394 1.1E-29 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 Pfam PF05193 Peptidase M16 inactive domain 686 856 1.5E-25 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 PANTHER PTHR11851:SF136 12 857 0.0 T 22-04-2016 VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 SUPERFAMILY SSF63411 520 721 2.71E-42 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 PANTHER PTHR11851 12 857 0.0 T 22-04-2016 VCLMA_RS02715 6061735cd3943563c962f9c39c4f734a 951 SUPERFAMILY SSF63411 281 466 1.0E-31 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS09000 ba4a1bb377e5f49b6275932b23aee939 87 SUPERFAMILY SSF55229 33 85 1.83E-16 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VCLMA_RS09000 ba4a1bb377e5f49b6275932b23aee939 87 PANTHER PTHR33404 1 85 5.0E-31 T 22-04-2016 VCLMA_RS09000 ba4a1bb377e5f49b6275932b23aee939 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 87 18.75 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VCLMA_RS09000 ba4a1bb377e5f49b6275932b23aee939 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 2.3E-23 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VCLMA_RS09000 ba4a1bb377e5f49b6275932b23aee939 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 1.2E-34 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VCLMA_RS09000 ba4a1bb377e5f49b6275932b23aee939 87 Gene3D G3DSA:3.30.1070.10 33 86 1.4E-21 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 VCLMA_RS11310 e20b8b6a9e1044f8dd2db13dae16cd87 420 Pfam PF01384 Phosphate transporter family 26 407 4.7E-118 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VCLMA_RS11310 e20b8b6a9e1044f8dd2db13dae16cd87 420 PANTHER PTHR11101 1 418 1.9E-273 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 VCLMA_RS11310 e20b8b6a9e1044f8dd2db13dae16cd87 420 PANTHER PTHR11101:SF63 1 418 1.9E-273 T 22-04-2016 VCLMA_RS12240 d038d0e9ac21f362c8fd897efb3707d4 491 Pfam PF05036 Sporulation related domain 404 477 2.4E-8 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VCLMA_RS12240 d038d0e9ac21f362c8fd897efb3707d4 491 Pfam PF13401 AAA domain 29 152 1.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS12240 d038d0e9ac21f362c8fd897efb3707d4 491 Gene3D G3DSA:3.40.50.300 26 155 6.6E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12240 d038d0e9ac21f362c8fd897efb3707d4 491 SUPERFAMILY SSF52540 13 220 4.69E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS04435 7423d0a27d31b2265a581d2f5701711e 373 PANTHER PTHR30474:SF1 1 371 3.3E-183 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VCLMA_RS04435 7423d0a27d31b2265a581d2f5701711e 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VCLMA_RS04435 7423d0a27d31b2265a581d2f5701711e 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 4.9E-138 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 VCLMA_RS04435 7423d0a27d31b2265a581d2f5701711e 373 PANTHER PTHR30474 1 371 3.3E-183 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VCLMA_RS04435 7423d0a27d31b2265a581d2f5701711e 373 Pfam PF01098 Cell cycle protein 23 367 7.4E-115 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 PANTHER PTHR24078 205 274 4.3E-13 T 22-04-2016 VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 PANTHER PTHR24078 51 89 4.3E-13 T 22-04-2016 VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 SMART SM00271 216 281 2.5E-21 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 Pfam PF00226 DnaJ domain 217 279 3.5E-14 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 283 38.715 T 22-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 Pfam PF05099 Tellurite resistance protein TerB 44 176 5.6E-17 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 PANTHER PTHR24078:SF319 205 274 4.3E-13 T 22-04-2016 VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 PANTHER PTHR24078:SF319 51 89 4.3E-13 T 22-04-2016 VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 PRINTS PR00625 DnaJ domain signature 219 237 3.7E-12 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 PRINTS PR00625 DnaJ domain signature 261 281 3.7E-12 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 PRINTS PR00625 DnaJ domain signature 237 252 3.7E-12 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 SUPERFAMILY SSF46565 137 279 2.41E-34 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 Gene3D G3DSA:1.10.287.110 222 279 7.2E-17 T 22-04-2016 IPR001623 DnaJ domain VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 Gene3D G3DSA:1.10.3680.10 19 221 3.4E-40 T 22-04-2016 IPR029024 TerB-like VCLMA_RS02250 d1ee92a8ec4ce9a0e30aa542f6282258 283 SUPERFAMILY SSF158682 47 180 6.28E-22 T 22-04-2016 IPR029024 TerB-like VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 736 1.8E-185 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:3.30.70.260 661 734 4.9E-18 T 22-04-2016 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 PANTHER PTHR21262:SF5 54 738 0.0 T 22-04-2016 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 PANTHER PTHR21262 54 738 0.0 T 22-04-2016 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF02824 TGS domain 403 462 1.9E-22 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF81271 396 462 2.83E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF13328 HD domain 56 190 1.1E-37 T 22-04-2016 IPR003607 HD/PDEase domain VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:3.10.20.30 403 464 5.7E-25 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF13291 ACT domain 660 736 1.6E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 Gene3D G3DSA:3.30.460.10 193 339 2.0E-49 T 22-04-2016 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 SMART SM00954 250 360 1.6E-63 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF55021 661 736 3.58E-11 T 22-04-2016 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 1.2E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF81301 195 407 3.11E-61 T 22-04-2016 VCLMA_RS11350 0a4551b92006f0bf6cf5b14be413c6a0 738 SUPERFAMILY SSF109604 32 205 1.69E-43 T 22-04-2016 VCLMA_RS14595 e1d581604960ac6ff4164b917fb9dbb6 129 Pfam PF04563 RNA polymerase beta subunit 37 84 8.4E-12 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14595 e1d581604960ac6ff4164b917fb9dbb6 129 Pfam PF04561 RNA polymerase Rpb2, domain 2 6 38 1.2E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14595 e1d581604960ac6ff4164b917fb9dbb6 129 PANTHER PTHR20856:SF20 8 129 1.8E-74 T 22-04-2016 VCLMA_RS14595 e1d581604960ac6ff4164b917fb9dbb6 129 Gene3D G3DSA:3.90.1100.10 27 129 9.5E-47 T 22-04-2016 VCLMA_RS14595 e1d581604960ac6ff4164b917fb9dbb6 129 Pfam PF04565 RNA polymerase Rpb2, domain 3 97 129 1.4E-6 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14595 e1d581604960ac6ff4164b917fb9dbb6 129 PANTHER PTHR20856 8 129 1.8E-74 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14595 e1d581604960ac6ff4164b917fb9dbb6 129 SUPERFAMILY SSF64484 5 129 3.36E-40 T 22-04-2016 VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 SUPERFAMILY SSF52402 4 159 1.26E-24 T 22-04-2016 VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 PANTHER PTHR31964 245 315 2.2E-69 T 22-04-2016 VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 PANTHER PTHR31964 1 90 2.2E-69 T 22-04-2016 VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 Gene3D G3DSA:3.40.50.620 142 300 1.5E-25 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 SUPERFAMILY SSF52402 173 309 3.85E-24 T 22-04-2016 VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 Pfam PF00582 Universal stress protein family 176 301 1.1E-15 T 22-04-2016 IPR006016 UspA GO:0006950 VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 Pfam PF00582 Universal stress protein family 4 148 7.7E-13 T 22-04-2016 IPR006016 UspA GO:0006950 VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 Gene3D G3DSA:3.40.50.620 4 141 8.4E-19 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 PANTHER PTHR31964:SF41 245 315 2.2E-69 T 22-04-2016 VCLMA_RS06750 9b77d57d201307db15e067227d32adee 315 PANTHER PTHR31964:SF41 1 90 2.2E-69 T 22-04-2016 VCLMA_RS07410 9224a414f8bf1608bf57be027e835cfc 253 PANTHER PTHR35936:SF3 6 253 1.1E-101 T 22-04-2016 VCLMA_RS07410 9224a414f8bf1608bf57be027e835cfc 253 PANTHER PTHR35936 6 253 1.1E-101 T 22-04-2016 VCLMA_RS07410 9224a414f8bf1608bf57be027e835cfc 253 Gene3D G3DSA:3.40.190.10 43 149 1.3E-7 T 22-04-2016 VCLMA_RS07410 9224a414f8bf1608bf57be027e835cfc 253 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 230 7.2E-13 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS07410 9224a414f8bf1608bf57be027e835cfc 253 SUPERFAMILY SSF53850 38 248 1.19E-29 T 22-04-2016 VCLMA_RS02235 3a45de85d4991a3e029bf073ac2ddcee 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 2.8E-128 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VCLMA_RS02235 3a45de85d4991a3e029bf073ac2ddcee 330 PANTHER PTHR30004:SF5 1 330 7.3E-221 T 22-04-2016 VCLMA_RS02235 3a45de85d4991a3e029bf073ac2ddcee 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 321 1.5E-106 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VCLMA_RS02235 3a45de85d4991a3e029bf073ac2ddcee 330 SUPERFAMILY SSF53659 3 326 4.32E-111 T 22-04-2016 VCLMA_RS02235 3a45de85d4991a3e029bf073ac2ddcee 330 Gene3D G3DSA:3.40.718.10 2 328 8.5E-134 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VCLMA_RS02235 3a45de85d4991a3e029bf073ac2ddcee 330 PANTHER PTHR30004 1 330 7.3E-221 T 22-04-2016 VCLMA_RS02235 3a45de85d4991a3e029bf073ac2ddcee 330 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 325 35.724 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 VCLMA_RS09765 a2fd347006d2cc6f0d5b67bd0914eba8 192 SUPERFAMILY SSF160443 105 179 1.12E-11 T 22-04-2016 IPR002625 Smr domain VCLMA_RS09765 a2fd347006d2cc6f0d5b67bd0914eba8 192 SMART SM00463 104 182 1.5E-14 T 22-04-2016 IPR002625 Smr domain VCLMA_RS09765 a2fd347006d2cc6f0d5b67bd0914eba8 192 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 183 37.515 T 22-04-2016 IPR022990 Uncharacterised protein family UPF0115 VCLMA_RS09765 a2fd347006d2cc6f0d5b67bd0914eba8 192 Pfam PF01713 Smr domain 107 179 4.7E-18 T 22-04-2016 IPR002625 Smr domain VCLMA_RS09765 a2fd347006d2cc6f0d5b67bd0914eba8 192 PANTHER PTHR35562 6 179 6.0E-113 T 22-04-2016 VCLMA_RS09765 a2fd347006d2cc6f0d5b67bd0914eba8 192 PANTHER PTHR35562:SF1 6 179 6.0E-113 T 22-04-2016 VCLMA_RS02065 8f6010e9c127b7fcb377209a067d0454 175 Gene3D G3DSA:3.30.700.10 7 32 3.2E-5 T 22-04-2016 VCLMA_RS02065 8f6010e9c127b7fcb377209a067d0454 175 SUPERFAMILY SSF54523 7 85 3.3E-13 T 22-04-2016 VCLMA_RS02065 8f6010e9c127b7fcb377209a067d0454 175 PANTHER PTHR30093:SF7 1 57 2.7E-25 T 22-04-2016 VCLMA_RS02065 8f6010e9c127b7fcb377209a067d0454 175 Pfam PF13633 Prokaryotic N-terminal methylation site 4 28 1.0E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02065 8f6010e9c127b7fcb377209a067d0454 175 PANTHER PTHR30093 1 57 2.7E-25 T 22-04-2016 VCLMA_RS02065 8f6010e9c127b7fcb377209a067d0454 175 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 8.7E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02065 8f6010e9c127b7fcb377209a067d0454 175 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS00770 80796fa43f8042e9969735dc2e5f78af 265 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS00770 80796fa43f8042e9969735dc2e5f78af 265 SUPERFAMILY SSF53681 112 258 1.64E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS00770 80796fa43f8042e9969735dc2e5f78af 265 Pfam PF01177 Asp/Glu/Hydantoin racemase 11 215 5.6E-27 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS00770 80796fa43f8042e9969735dc2e5f78af 265 Hamap MF_00258 Glutamate racemase [murI]. 7 254 33.951 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS00770 80796fa43f8042e9969735dc2e5f78af 265 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 230 8.4E-71 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS00770 80796fa43f8042e9969735dc2e5f78af 265 SUPERFAMILY SSF53681 8 108 3.73E-30 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS00770 80796fa43f8042e9969735dc2e5f78af 265 Gene3D G3DSA:3.40.50.1860 8 175 5.0E-47 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS00770 80796fa43f8042e9969735dc2e5f78af 265 PANTHER PTHR21198:SF2 1 264 1.1E-107 T 22-04-2016 VCLMA_RS00770 80796fa43f8042e9969735dc2e5f78af 265 PANTHER PTHR21198 1 264 1.1E-107 T 22-04-2016 VCLMA_RS09265 7d0e4cc472e5ee35d46aca0a42d0e797 324 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 211 317 4.6E-22 T 22-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS09265 7d0e4cc472e5ee35d46aca0a42d0e797 324 PANTHER PTHR11669 14 182 5.8E-60 T 22-04-2016 VCLMA_RS09265 7d0e4cc472e5ee35d46aca0a42d0e797 324 SUPERFAMILY SSF48019 210 322 1.11E-26 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 VCLMA_RS09265 7d0e4cc472e5ee35d46aca0a42d0e797 324 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 15 199 2.5E-62 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS09265 7d0e4cc472e5ee35d46aca0a42d0e797 324 PANTHER PTHR11669:SF8 14 182 5.8E-60 T 22-04-2016 VCLMA_RS09265 7d0e4cc472e5ee35d46aca0a42d0e797 324 SUPERFAMILY SSF52540 8 194 1.06E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09265 7d0e4cc472e5ee35d46aca0a42d0e797 324 Pfam PF13177 DNA polymerase III, delta subunit 18 168 1.5E-44 T 22-04-2016 VCLMA_RS09265 7d0e4cc472e5ee35d46aca0a42d0e797 324 Gene3D G3DSA:1.20.272.10 210 320 1.4E-30 T 22-04-2016 VCLMA_RS09265 7d0e4cc472e5ee35d46aca0a42d0e797 324 Gene3D G3DSA:3.40.50.300 13 168 5.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS10790 1ed60ae353fa609a2714a47cf9648f83 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 4.6E-13 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS10790 1ed60ae353fa609a2714a47cf9648f83 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 1.3E-16 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VCLMA_RS10790 1ed60ae353fa609a2714a47cf9648f83 343 Gene3D G3DSA:2.160.10.10 173 340 2.3E-34 T 22-04-2016 VCLMA_RS10790 1ed60ae353fa609a2714a47cf9648f83 343 Gene3D G3DSA:3.30.60.70 131 171 3.4E-22 T 22-04-2016 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VCLMA_RS10790 1ed60ae353fa609a2714a47cf9648f83 343 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 76 129 8.0E-6 T 22-04-2016 VCLMA_RS10790 1ed60ae353fa609a2714a47cf9648f83 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 343 4.5E-178 T 22-04-2016 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VCLMA_RS10790 1ed60ae353fa609a2714a47cf9648f83 343 SUPERFAMILY SSF51161 90 323 1.66E-36 T 22-04-2016 IPR011004 Trimeric LpxA-like VCLMA_RS10790 1ed60ae353fa609a2714a47cf9648f83 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 47.018 T 22-04-2016 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 VCLMA_RS00510 db5bb4cdde056186410037205e761a85 277 SUPERFAMILY SSF144091 97 273 1.44E-41 T 22-04-2016 VCLMA_RS00510 db5bb4cdde056186410037205e761a85 277 Pfam PF01694 Rhomboid family 134 273 1.2E-33 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VCLMA_RS00510 db5bb4cdde056186410037205e761a85 277 PANTHER PTHR22936:SF30 11 276 4.4E-114 T 22-04-2016 VCLMA_RS00510 db5bb4cdde056186410037205e761a85 277 Gene3D G3DSA:1.20.1540.10 98 269 1.8E-34 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VCLMA_RS00510 db5bb4cdde056186410037205e761a85 277 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 86 4.2E-31 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VCLMA_RS00510 db5bb4cdde056186410037205e761a85 277 PANTHER PTHR22936 11 276 4.4E-114 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 VCLMA_RS00510 db5bb4cdde056186410037205e761a85 277 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 272 3.2E-113 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 SMART SM00448 5 117 1.8E-16 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 PANTHER PTHR33121:SF16 285 530 3.8E-43 T 22-04-2016 VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 Gene3D G3DSA:3.20.20.450 288 532 5.2E-64 T 22-04-2016 IPR001633 EAL domain VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 SMART SM00052 272 525 3.2E-48 T 22-04-2016 IPR001633 EAL domain VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 SUPERFAMILY SSF141868 287 532 1.57E-61 T 22-04-2016 IPR001633 EAL domain VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 Pfam PF00072 Response regulator receiver domain 7 117 5.9E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 Gene3D G3DSA:3.40.50.2300 6 129 4.0E-30 T 22-04-2016 VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 Pfam PF00563 EAL domain 287 519 1.8E-60 T 22-04-2016 IPR001633 EAL domain VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 PANTHER PTHR33121 285 530 3.8E-43 T 22-04-2016 VCLMA_RS05105 f273608b030838e2ac612951ae23abc0 536 SUPERFAMILY SSF52172 4 136 7.26E-29 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS02400 7652797d4067dcf500edfd552e2db1e6 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 5.1E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS02400 7652797d4067dcf500edfd552e2db1e6 298 Gene3D G3DSA:1.10.10.10 3 88 6.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02400 7652797d4067dcf500edfd552e2db1e6 298 SUPERFAMILY SSF53850 89 295 1.81E-26 T 22-04-2016 VCLMA_RS02400 7652797d4067dcf500edfd552e2db1e6 298 Gene3D G3DSA:3.40.190.10 175 244 7.2E-10 T 22-04-2016 VCLMA_RS02400 7652797d4067dcf500edfd552e2db1e6 298 PANTHER PTHR30537:SF19 1 293 4.4E-195 T 22-04-2016 VCLMA_RS02400 7652797d4067dcf500edfd552e2db1e6 298 Pfam PF03466 LysR substrate binding domain 88 292 1.7E-24 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS02400 7652797d4067dcf500edfd552e2db1e6 298 SUPERFAMILY SSF46785 3 88 1.13E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02400 7652797d4067dcf500edfd552e2db1e6 298 Gene3D G3DSA:3.40.190.10 92 174 5.2E-13 T 22-04-2016 VCLMA_RS02400 7652797d4067dcf500edfd552e2db1e6 298 PANTHER PTHR30537 1 293 4.4E-195 T 22-04-2016 VCLMA_RS06505 f2d7d35907e8d7e66e6aa29a18be0bbc 176 PANTHER PTHR23044 1 176 1.1E-64 T 22-04-2016 VCLMA_RS06505 f2d7d35907e8d7e66e6aa29a18be0bbc 176 SUPERFAMILY SSF53098 3 175 1.18E-28 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS06505 f2d7d35907e8d7e66e6aa29a18be0bbc 176 Gene3D G3DSA:3.30.420.10 2 176 2.6E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS06505 f2d7d35907e8d7e66e6aa29a18be0bbc 176 SMART SM00479 5 176 4.9E-4 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS06505 f2d7d35907e8d7e66e6aa29a18be0bbc 176 Pfam PF00929 Exonuclease 7 171 1.1E-11 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS06505 f2d7d35907e8d7e66e6aa29a18be0bbc 176 PANTHER PTHR23044:SF5 1 176 1.1E-64 T 22-04-2016 VCLMA_RS06410 d541d459798e29a7d471e2496d6acd91 223 PANTHER PTHR23291 1 223 7.5E-121 T 22-04-2016 IPR006214 Bax inhibitor 1-related VCLMA_RS06410 d541d459798e29a7d471e2496d6acd91 223 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 216 1.3E-44 T 22-04-2016 VCLMA_RS06410 d541d459798e29a7d471e2496d6acd91 223 PANTHER PTHR23291:SF37 1 223 7.5E-121 T 22-04-2016 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 PANTHER PTHR30081:SF1 1 162 2.2E-228 T 22-04-2016 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 PANTHER PTHR30081:SF1 304 604 2.2E-228 T 22-04-2016 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 PANTHER PTHR30081:SF1 215 273 2.2E-228 T 22-04-2016 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 Pfam PF07549 SecD/SecF GG Motif 104 130 2.8E-7 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 336 585 1.1E-82 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 SUPERFAMILY SSF82866 401 597 1.07E-44 T 22-04-2016 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 Pfam PF13721 SecD export protein N-terminal TM region 1 92 2.6E-28 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 605 47.369 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 592 4.3E-150 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 Pfam PF02355 Protein export membrane protein 424 585 3.4E-19 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 PRINTS PR00702 Acriflavin resistance protein family signature 494 518 3.6E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 3.6E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 PRINTS PR00702 Acriflavin resistance protein family signature 569 592 3.6E-5 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 PANTHER PTHR30081 1 162 2.2E-228 T 22-04-2016 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 PANTHER PTHR30081 304 604 2.2E-228 T 22-04-2016 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 PANTHER PTHR30081 215 273 2.2E-228 T 22-04-2016 VCLMA_RS03605 bc08a89ddb28cb948349d7532c385c87 606 Gene3D G3DSA:1.20.1640.10 425 598 3.5E-25 T 22-04-2016 VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 Pfam PF16582 Middle domain of thiamine pyrophosphate 188 402 1.5E-46 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 SUPERFAMILY SSF52518 381 568 1.96E-25 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 PANTHER PTHR18968:SF114 4 567 8.5E-206 T 22-04-2016 VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 443 2.9E-139 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 SUPERFAMILY SSF52518 9 191 7.5E-29 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 PIRSF PIRSF004983 3 570 3.2E-196 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 6 567 33.301 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 Gene3D G3DSA:3.40.50.970 402 561 1.7E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 12 141 2.9E-27 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 PANTHER PTHR18968 4 567 8.5E-206 T 22-04-2016 VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 Gene3D G3DSA:3.40.50.970 10 184 3.4E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS09070 873c13541cc1c7cf17ce2ca2c085c8dc 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 548 7.0E-6 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VCLMA_RS07220 d9d4773bf66a9ab3295ae5f31958172b 120 SUPERFAMILY SSF55298 1 116 1.07E-26 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VCLMA_RS07220 d9d4773bf66a9ab3295ae5f31958172b 120 Pfam PF01042 Endoribonuclease L-PSP 33 114 1.3E-17 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VCLMA_RS07220 d9d4773bf66a9ab3295ae5f31958172b 120 PANTHER PTHR11803:SF11 1 120 1.8E-29 T 22-04-2016 VCLMA_RS07220 d9d4773bf66a9ab3295ae5f31958172b 120 PANTHER PTHR11803 1 120 1.8E-29 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family VCLMA_RS07220 d9d4773bf66a9ab3295ae5f31958172b 120 Gene3D G3DSA:3.30.1330.40 5 116 9.0E-20 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VCLMA_RS05235 4f91087340972c771cdc17899d26e073 267 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 267 32.89 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VCLMA_RS05235 4f91087340972c771cdc17899d26e073 267 PANTHER PTHR10108 20 249 2.2E-58 T 22-04-2016 VCLMA_RS05235 4f91087340972c771cdc17899d26e073 267 Pfam PF08241 Methyltransferase domain 57 149 1.6E-27 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VCLMA_RS05235 4f91087340972c771cdc17899d26e073 267 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 21 266 6.8E-65 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 VCLMA_RS05235 4f91087340972c771cdc17899d26e073 267 Gene3D G3DSA:3.40.50.150 19 248 1.6E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05235 4f91087340972c771cdc17899d26e073 267 PANTHER PTHR10108:SF855 20 249 2.2E-58 T 22-04-2016 VCLMA_RS05235 4f91087340972c771cdc17899d26e073 267 SUPERFAMILY SSF53335 19 247 7.3E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 PANTHER PTHR11019 7 138 5.9E-68 T 22-04-2016 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 PANTHER PTHR11019 162 279 5.9E-68 T 22-04-2016 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 SUPERFAMILY SSF46689 229 278 1.03E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 SUPERFAMILY SSF46689 180 226 2.96E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 PANTHER PTHR11019:SF11 7 138 5.9E-68 T 22-04-2016 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 PANTHER PTHR11019:SF11 162 279 5.9E-68 T 22-04-2016 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 SMART SM00342 193 276 7.3E-32 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 Pfam PF12833 Helix-turn-helix domain 199 277 1.4E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 Gene3D G3DSA:1.10.10.60 171 229 1.7E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 Gene3D G3DSA:1.10.10.60 230 278 3.4E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 1.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VCLMA_RS08370 4208fde138f07b76fde90d081c5b0538 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 1.4E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.4E-38 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.4E-38 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.4E-38 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.4E-38 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.4E-38 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 SUPERFAMILY SSF160544 250 355 2.88E-38 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 Gene3D G3DSA:3.40.1690.10 218 357 7.7E-61 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 PANTHER PTHR30531:SF4 1 361 1.6E-260 T 22-04-2016 VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 5.6E-137 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 PANTHER PTHR30531 1 361 1.6E-260 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VCLMA_RS09770 48cfdd76883ef3d2c22ea23ee48f14ba 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 4.5E-118 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VCLMA_RS03595 08188fc19015e59859f795999944aa30 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 361 58.546 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS03595 08188fc19015e59859f795999944aa30 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 1.9E-178 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS03595 08188fc19015e59859f795999944aa30 379 SUPERFAMILY SSF51713 3 366 8.89E-165 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS03595 08188fc19015e59859f795999944aa30 379 PANTHER PTHR21148 1 370 2.4E-189 T 22-04-2016 VCLMA_RS03595 08188fc19015e59859f795999944aa30 379 PANTHER PTHR21148:SF26 1 370 2.4E-189 T 22-04-2016 VCLMA_RS03595 08188fc19015e59859f795999944aa30 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 1.3E-96 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS03595 08188fc19015e59859f795999944aa30 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 1.4E-187 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS03595 08188fc19015e59859f795999944aa30 379 Gene3D G3DSA:3.20.20.105 2 369 1.9E-172 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS04670 1d0f9646cb9a33fc6d6c631f57798c16 221 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 175 217 4.2E-17 T 22-04-2016 IPR020011 Motility protein FimV, C-terminal VCLMA_RS08975 d33fb668285b6727e4ade57b200b875e 315 Gene3D G3DSA:3.40.190.10 91 175 9.4E-10 T 22-04-2016 VCLMA_RS08975 d33fb668285b6727e4ade57b200b875e 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.1E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS08975 d33fb668285b6727e4ade57b200b875e 315 Gene3D G3DSA:1.10.10.10 7 88 4.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08975 d33fb668285b6727e4ade57b200b875e 315 Pfam PF03466 LysR substrate binding domain 90 296 4.9E-46 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS08975 d33fb668285b6727e4ade57b200b875e 315 PANTHER PTHR30537:SF14 1 313 3.7E-232 T 22-04-2016 VCLMA_RS08975 d33fb668285b6727e4ade57b200b875e 315 PANTHER PTHR30537 1 313 3.7E-232 T 22-04-2016 VCLMA_RS08975 d33fb668285b6727e4ade57b200b875e 315 Gene3D G3DSA:3.40.190.10 176 263 5.6E-23 T 22-04-2016 VCLMA_RS08975 d33fb668285b6727e4ade57b200b875e 315 SUPERFAMILY SSF53850 90 299 5.97E-47 T 22-04-2016 VCLMA_RS08975 d33fb668285b6727e4ade57b200b875e 315 SUPERFAMILY SSF46785 7 114 7.02E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12315 85914a4ef2f80524d020a0450129ced5 262 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.6E-63 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12315 85914a4ef2f80524d020a0450129ced5 262 Gene3D G3DSA:3.40.1160.10 9 260 6.2E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS12315 85914a4ef2f80524d020a0450129ced5 262 PANTHER PTHR23342 3 262 6.3E-88 T 22-04-2016 VCLMA_RS12315 85914a4ef2f80524d020a0450129ced5 262 PIRSF PIRSF000728 1 261 9.8E-70 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12315 85914a4ef2f80524d020a0450129ced5 262 SUPERFAMILY SSF53633 9 262 4.81E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS12315 85914a4ef2f80524d020a0450129ced5 262 Hamap MF_00082_B Acetylglutamate kinase [argB]. 5 262 26.374 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12315 85914a4ef2f80524d020a0450129ced5 262 Pfam PF00696 Amino acid kinase family 9 238 2.4E-34 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 SUPERFAMILY SSF50249 71 154 1.44E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 2.1E-273 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 60.252 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 Pfam PF08206 Ribonuclease B OB domain 91 151 8.0E-21 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 SMART SM00316 650 733 9.9E-15 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 SUPERFAMILY SSF50249 651 739 5.97E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 SMART SM00357 90 152 1.3E-12 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 2.7E-255 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 Pfam PF08461 Ribonuclease R winged-helix domain 26 88 2.2E-12 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 PANTHER PTHR23355:SF9 8 816 0.0 T 22-04-2016 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 Gene3D G3DSA:2.40.50.140 652 736 1.7E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 SUPERFAMILY SSF50249 145 244 3.3E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 Pfam PF00773 RNB domain 267 594 9.1E-107 T 22-04-2016 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 SUPERFAMILY SSF50249 227 650 7.42E-144 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 PANTHER PTHR23355 8 816 0.0 T 22-04-2016 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 Pfam PF00575 S1 RNA binding domain 650 731 5.2E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS12105 9b9d8480c78ee3d3c0d5e593a89086d3 821 SMART SM00955 267 595 2.4E-186 T 22-04-2016 VCLMA_RS05205 83ef0b86cf4abc3eec8debe19fb61bae 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 30.783 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VCLMA_RS05205 83ef0b86cf4abc3eec8debe19fb61bae 198 PANTHER PTHR35869 1 198 8.8E-59 T 22-04-2016 VCLMA_RS05205 83ef0b86cf4abc3eec8debe19fb61bae 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 197 8.7E-58 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VCLMA_RS05205 83ef0b86cf4abc3eec8debe19fb61bae 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 28 185 6.7E-55 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VCLMA_RS05205 83ef0b86cf4abc3eec8debe19fb61bae 198 Gene3D G3DSA:2.50.20.10 20 197 8.7E-52 T 22-04-2016 VCLMA_RS05205 83ef0b86cf4abc3eec8debe19fb61bae 198 SUPERFAMILY SSF89392 20 197 2.04E-52 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PANTHER PTHR11670 1 309 2.7E-266 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PANTHER PTHR11670 329 467 2.7E-266 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 Gene3D G3DSA:3.30.499.10 337 467 7.9E-62 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 467 9.8E-267 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 ProSitePatterns PS00450 Aconitase family signature 1. 341 357 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 467 60.376 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 SUPERFAMILY SSF53732 5 466 7.85E-166 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 ProSitePatterns PS01244 Aconitase family signature 2. 401 414 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 Gene3D G3DSA:3.40.1060.10 168 282 4.7E-40 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PANTHER PTHR11670:SF38 1 309 2.7E-266 T 22-04-2016 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PANTHER PTHR11670:SF38 329 467 2.7E-266 T 22-04-2016 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 Gene3D G3DSA:3.30.499.10 3 160 1.1E-23 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PRINTS PR00415 Aconitase family signature 288 302 6.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PRINTS PR00415 Aconitase family signature 211 224 6.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PRINTS PR00415 Aconitase family signature 401 414 6.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PRINTS PR00415 Aconitase family signature 121 134 6.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PRINTS PR00415 Aconitase family signature 345 356 6.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PRINTS PR00415 Aconitase family signature 110 118 6.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PRINTS PR00415 Aconitase family signature 135 150 6.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PRINTS PR00415 Aconitase family signature 84 97 6.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 PRINTS PR00415 Aconitase family signature 197 210 6.2E-51 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS11545 036fd54a10b84c0c475ba06ab37ccfc0 467 Pfam PF00330 Aconitase family (aconitate hydratase) 9 459 3.8E-156 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 PANTHER PTHR30244 3 379 1.4E-163 T 22-04-2016 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 PRINTS PR00207 Flagellin signature 111 134 1.1E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 PRINTS PR00207 Flagellin signature 76 95 1.1E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 PRINTS PR00207 Flagellin signature 37 54 1.1E-24 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.0E-42 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 SUPERFAMILY SSF64518 1 379 1.31E-98 T 22-04-2016 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 2.4E-26 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 Gene3D G3DSA:1.20.1330.10 54 171 1.9E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 Gene3D G3DSA:1.20.1330.10 281 334 1.9E-60 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 PANTHER PTHR30244:SF1 3 379 1.4E-163 T 22-04-2016 VCLMA_RS10150 a709721b48aa6441bfc2fbc5002b1517 379 Pfam PF07196 Flagellin hook IN motif 197 246 1.6E-7 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VCLMA_RS13990 d5367dea3b532ba0b6cc311e1579c6e8 52 Gene3D G3DSA:3.40.50.2000 2 51 9.7E-17 T 22-04-2016 VCLMA_RS13990 d5367dea3b532ba0b6cc311e1579c6e8 52 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 2 48 2.7E-11 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 VCLMA_RS13990 d5367dea3b532ba0b6cc311e1579c6e8 52 SUPERFAMILY SSF53756 2 49 4.39E-9 T 22-04-2016 VCLMA_RS08705 6f22b3478dfaebef41a2e86f9e4af019 472 Gene3D G3DSA:1.25.40.10 217 266 4.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS08705 6f22b3478dfaebef41a2e86f9e4af019 472 Gene3D G3DSA:1.25.40.10 129 181 4.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS08705 6f22b3478dfaebef41a2e86f9e4af019 472 Gene3D G3DSA:1.25.40.10 53 68 4.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS08705 6f22b3478dfaebef41a2e86f9e4af019 472 SUPERFAMILY SSF48452 213 266 2.49E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS08705 6f22b3478dfaebef41a2e86f9e4af019 472 SUPERFAMILY SSF48452 129 169 2.49E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS08705 6f22b3478dfaebef41a2e86f9e4af019 472 SUPERFAMILY SSF48452 57 71 2.49E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 PANTHER PTHR23293:SF6 245 302 2.0E-96 T 22-04-2016 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 PANTHER PTHR23293:SF6 178 211 2.0E-96 T 22-04-2016 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 PANTHER PTHR23293:SF6 1 158 2.0E-96 T 22-04-2016 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 SUPERFAMILY SSF52402 6 209 1.75E-73 T 22-04-2016 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.485 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 2.5E-64 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 4.9E-162 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 PIRSF PIRSF002936 1 302 2.7E-156 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 PANTHER PTHR23293 245 302 2.0E-96 T 22-04-2016 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 PANTHER PTHR23293 178 211 2.0E-96 T 22-04-2016 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 PANTHER PTHR23293 1 158 2.0E-96 T 22-04-2016 VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 Gene3D G3DSA:3.40.50.620 244 253 6.5E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS11910 3e37d13ac8145d54048c57a88c0a6665 302 Gene3D G3DSA:3.40.50.620 3 210 6.5E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS11530 28c17275872a4a6c1adf794011187f00 191 Gene3D G3DSA:1.10.357.10 3 185 4.9E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS11530 28c17275872a4a6c1adf794011187f00 191 Pfam PF14514 Transcriptional regulator, TetR, C-terminal 69 188 1.4E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VCLMA_RS11530 28c17275872a4a6c1adf794011187f00 191 SUPERFAMILY SSF48498 67 186 2.61E-7 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VCLMA_RS11530 28c17275872a4a6c1adf794011187f00 191 SUPERFAMILY SSF46689 3 62 9.23E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS11530 28c17275872a4a6c1adf794011187f00 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 3 43 1.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS11530 28c17275872a4a6c1adf794011187f00 191 PANTHER PTHR30055 1 153 1.3E-70 T 22-04-2016 VCLMA_RS11530 28c17275872a4a6c1adf794011187f00 191 PANTHER PTHR30055:SF42 1 153 1.3E-70 T 22-04-2016 VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 PANTHER PTHR12526 351 465 1.4E-112 T 22-04-2016 VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 PANTHER PTHR12526 153 288 1.4E-112 T 22-04-2016 VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 Gene3D G3DSA:2.60.120.10 357 464 6.2E-42 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 Pfam PF00483 Nucleotidyl transferase 4 286 5.1E-72 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 465 1.1E-223 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 SUPERFAMILY SSF53448 2 280 2.62E-75 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 Pfam PF01050 Mannose-6-phosphate isomerase 314 464 1.6E-68 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 PANTHER PTHR12526:SF387 351 465 1.4E-112 T 22-04-2016 VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 PANTHER PTHR12526:SF387 153 288 1.4E-112 T 22-04-2016 VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 Gene3D G3DSA:3.90.550.10 2 270 7.4E-99 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS01160 2a8455039556ef815d817dca42930dc5 465 SUPERFAMILY SSF51182 184 464 8.9E-85 T 22-04-2016 IPR011051 RmlC-like cupin domain VCLMA_RS01055 b48a836b153c9fa459139f17c082f638 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 2.5E-25 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01055 b48a836b153c9fa459139f17c082f638 55 Pfam PF00471 Ribosomal protein L33 7 53 5.6E-17 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01055 b48a836b153c9fa459139f17c082f638 55 PANTHER PTHR15238 1 55 8.3E-25 T 22-04-2016 VCLMA_RS01055 b48a836b153c9fa459139f17c082f638 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01055 b48a836b153c9fa459139f17c082f638 55 SUPERFAMILY SSF57829 1 53 2.69E-19 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 VCLMA_RS01055 b48a836b153c9fa459139f17c082f638 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 14.747 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 PANTHER PTHR32089 193 578 1.3E-186 T 22-04-2016 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 329 358 1.6E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 1.6E-5 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 PANTHER PTHR32089:SF55 193 578 1.3E-186 T 22-04-2016 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 SMART SM00304 246 300 8.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 SMART SM00283 315 576 4.6E-54 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 SUPERFAMILY SSF58104 268 577 5.1E-73 T 22-04-2016 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 Pfam PF00672 HAMP domain 228 297 3.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 575 1.3E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06660 ee98e750cdc78fe38f17f6b9ad43a8a4 578 Gene3D G3DSA:1.10.287.950 331 546 4.2E-54 T 22-04-2016 VCLMA_RS10870 dab08d554ad5793bdeb2409360d1e313 207 Pfam PF10144 Bacterial virulence factor haemolysin 6 152 1.0E-43 T 22-04-2016 IPR019305 Uncharacterised protein family Smp VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 SUPERFAMILY SSF50249 3 123 1.03E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 PANTHER PTHR11652 1 116 5.2E-76 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 2.5E-70 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.557 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 Gene3D G3DSA:2.40.50.140 1 123 3.4E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.1E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 6.4E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01800 e7c5a46bfe4c3264e7058a488094437b 124 PIRSF PIRSF002133 1 124 7.7E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 100 1.0E-17 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 Gene3D G3DSA:1.10.443.10 123 298 2.5E-52 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 PANTHER PTHR30349:SF17 10 311 8.3E-165 T 22-04-2016 VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 PANTHER PTHR30349 10 311 8.3E-165 T 22-04-2016 VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 Pfam PF00589 Phage integrase family 122 290 1.1E-48 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 SUPERFAMILY SSF56349 117 302 1.59E-52 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 Gene3D G3DSA:1.10.150.130 15 110 7.2E-21 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 SUPERFAMILY SSF47823 16 107 9.42E-11 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 13 304 35.755 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD VCLMA_RS00635 66d2bcbb2263a047a70094f3d655070c 311 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 306 7.9E-108 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 VCLMA_RS09490 963fd4f4906b6e2654e4adaa82215daf 164 Gene3D G3DSA:2.40.50.180 59 94 4.9E-9 T 22-04-2016 VCLMA_RS09490 963fd4f4906b6e2654e4adaa82215daf 164 SUPERFAMILY SSF50341 14 158 2.35E-41 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09490 963fd4f4906b6e2654e4adaa82215daf 164 PANTHER PTHR22617 14 164 1.9E-113 T 22-04-2016 VCLMA_RS09490 963fd4f4906b6e2654e4adaa82215daf 164 PANTHER PTHR22617:SF26 14 164 1.9E-113 T 22-04-2016 VCLMA_RS09490 963fd4f4906b6e2654e4adaa82215daf 164 Gene3D G3DSA:2.30.30.40 95 146 6.0E-9 T 22-04-2016 VCLMA_RS09490 963fd4f4906b6e2654e4adaa82215daf 164 SMART SM00260 16 153 2.2E-49 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09490 963fd4f4906b6e2654e4adaa82215daf 164 Pfam PF01584 CheW-like domain 20 156 1.2E-39 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09690 78025e0c2ed3ae19261dad3610c6ba29 146 Pfam PF03788 LrgA family 27 120 1.0E-28 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 VCLMA_RS09690 78025e0c2ed3ae19261dad3610c6ba29 146 PANTHER PTHR33931:SF3 5 146 3.2E-84 T 22-04-2016 VCLMA_RS09690 78025e0c2ed3ae19261dad3610c6ba29 146 PANTHER PTHR33931 5 146 3.2E-84 T 22-04-2016 VCLMA_RS16995 b2a827e94ae90483855159e3b58b947d 83 PANTHER PTHR11451 1 74 1.5E-16 T 22-04-2016 VCLMA_RS16995 b2a827e94ae90483855159e3b58b947d 83 Gene3D G3DSA:3.30.930.10 5 80 1.0E-14 T 22-04-2016 VCLMA_RS16995 b2a827e94ae90483855159e3b58b947d 83 PANTHER PTHR11451:SF3 1 74 1.5E-16 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VCLMA_RS16995 b2a827e94ae90483855159e3b58b947d 83 SUPERFAMILY SSF55681 5 77 3.52E-13 T 22-04-2016 VCLMA_RS11815 940dd7d9cc60aac027507ee82bbc33a6 330 PANTHER PTHR30006:SF3 13 330 3.5E-136 T 22-04-2016 VCLMA_RS11815 940dd7d9cc60aac027507ee82bbc33a6 330 Gene3D G3DSA:3.40.190.10 23 131 1.3E-35 T 22-04-2016 VCLMA_RS11815 940dd7d9cc60aac027507ee82bbc33a6 330 Gene3D G3DSA:3.40.190.10 244 288 1.3E-35 T 22-04-2016 VCLMA_RS11815 940dd7d9cc60aac027507ee82bbc33a6 330 PANTHER PTHR30006 13 330 3.5E-136 T 22-04-2016 VCLMA_RS11815 940dd7d9cc60aac027507ee82bbc33a6 330 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 21 324 8.1E-155 T 22-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 VCLMA_RS11815 940dd7d9cc60aac027507ee82bbc33a6 330 Pfam PF13343 Bacterial extracellular solute-binding protein 76 294 6.2E-21 T 22-04-2016 VCLMA_RS11815 940dd7d9cc60aac027507ee82bbc33a6 330 SUPERFAMILY SSF53850 24 326 2.88E-66 T 22-04-2016 VCLMA_RS11815 940dd7d9cc60aac027507ee82bbc33a6 330 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 9 329 6.5E-148 T 22-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 PANTHER PTHR30053 1 188 6.6E-89 T 22-04-2016 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 SUPERFAMILY SSF50249 130 187 3.6E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 61 5.9E-25 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.037 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 Gene3D G3DSA:2.40.50.140 130 187 5.2E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.7E-21 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 SUPERFAMILY SSF50104 2 64 2.31E-20 T 22-04-2016 IPR008991 Translation protein SH3-like domain VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 SUPERFAMILY SSF50249 70 128 1.8E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 PIRSF PIRSF005901 2 188 1.7E-63 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 Gene3D G3DSA:2.30.30.30 1 65 1.9E-28 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 SMART SM00841 131 186 9.2E-31 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 SMART SM01185 69 123 2.6E-24 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 Gene3D G3DSA:2.40.50.140 66 129 2.0E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 2.0E-76 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 VCLMA_RS12385 d113ca8133d983778801baea670bbed6 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 9.1E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 VCLMA_RS08775 0c44be8d3189a4a17f6b6b0a44d31820 231 PANTHER PTHR32119 1 230 4.4E-123 T 22-04-2016 VCLMA_RS08775 0c44be8d3189a4a17f6b6b0a44d31820 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 7.9E-58 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS08775 0c44be8d3189a4a17f6b6b0a44d31820 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 226 2.6E-56 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS08775 0c44be8d3189a4a17f6b6b0a44d31820 231 PANTHER PTHR32119:SF2 1 230 4.4E-123 T 22-04-2016 VCLMA_RS08775 0c44be8d3189a4a17f6b6b0a44d31820 231 Gene3D G3DSA:3.20.20.70 3 229 2.4E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS08775 0c44be8d3189a4a17f6b6b0a44d31820 231 SUPERFAMILY SSF51366 2 228 1.16E-76 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VCLMA_RS08775 0c44be8d3189a4a17f6b6b0a44d31820 231 SMART SM00934 5 226 1.1E-102 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS08775 0c44be8d3189a4a17f6b6b0a44d31820 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS08775 0c44be8d3189a4a17f6b6b0a44d31820 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.153 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 PANTHER PTHR20854:SF5 1 273 1.8E-97 T 22-04-2016 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 2.1E-5 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 2.1E-5 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 2.1E-5 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 Pfam PF00459 Inositol monophosphatase family 14 253 2.3E-51 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 SUPERFAMILY SSF56655 6 273 1.57E-78 T 22-04-2016 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 Gene3D G3DSA:3.40.190.80 164 262 1.7E-35 T 22-04-2016 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 Gene3D G3DSA:3.30.540.10 6 163 7.7E-46 T 22-04-2016 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 260 1.0E-112 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 VCLMA_RS12680 0815de20e1e83254431c251eaeecad87 275 PANTHER PTHR20854 1 273 1.8E-97 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 SUPERFAMILY SSF52151 190 305 1.41E-81 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 SUPERFAMILY SSF52151 4 122 1.41E-81 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 1.3E-43 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 PIRSF PIRSF000446 1 307 2.0E-134 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 SUPERFAMILY SSF55048 128 197 2.09E-17 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 PANTHER PTHR10982 1 306 1.7E-162 T 22-04-2016 VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 2.8E-126 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 Gene3D G3DSA:3.30.70.250 125 196 2.0E-31 T 22-04-2016 VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 Pfam PF00698 Acyl transferase domain 7 300 3.2E-36 T 22-04-2016 IPR014043 Acyl transferase VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 Gene3D G3DSA:3.40.366.10 2 122 8.5E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VCLMA_RS09300 1084e4e226dec39b24b8b2f9507ee0e0 307 Gene3D G3DSA:3.40.366.10 197 300 8.5E-73 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 VCLMA_RS10780 1f5c5fd070d173a32981279227a4fca8 304 SUPERFAMILY SSF53850 92 297 1.41E-41 T 22-04-2016 VCLMA_RS10780 1f5c5fd070d173a32981279227a4fca8 304 Gene3D G3DSA:1.10.10.10 3 82 5.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS10780 1f5c5fd070d173a32981279227a4fca8 304 PANTHER PTHR30126 5 299 4.1E-101 T 22-04-2016 VCLMA_RS10780 1f5c5fd070d173a32981279227a4fca8 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 5.2E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS10780 1f5c5fd070d173a32981279227a4fca8 304 SUPERFAMILY SSF46785 3 82 4.15E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS10780 1f5c5fd070d173a32981279227a4fca8 304 Gene3D G3DSA:3.40.190.10 93 178 9.9E-17 T 22-04-2016 VCLMA_RS10780 1f5c5fd070d173a32981279227a4fca8 304 Gene3D G3DSA:3.40.190.10 179 262 6.6E-18 T 22-04-2016 VCLMA_RS10780 1f5c5fd070d173a32981279227a4fca8 304 Pfam PF03466 LysR substrate binding domain 90 294 2.2E-48 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS10780 1f5c5fd070d173a32981279227a4fca8 304 PANTHER PTHR30126:SF11 5 299 4.1E-101 T 22-04-2016 VCLMA_RS10485 2c66459a0516f5fd43ce840cebcc3015 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.284 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VCLMA_RS10485 2c66459a0516f5fd43ce840cebcc3015 243 PANTHER PTHR21499 4 241 2.7E-113 T 22-04-2016 VCLMA_RS10485 2c66459a0516f5fd43ce840cebcc3015 243 PANTHER PTHR21499:SF23 4 241 2.7E-113 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VCLMA_RS10485 2c66459a0516f5fd43ce840cebcc3015 243 SUPERFAMILY SSF53633 7 240 5.37E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10485 2c66459a0516f5fd43ce840cebcc3015 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.4E-102 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VCLMA_RS10485 2c66459a0516f5fd43ce840cebcc3015 243 Pfam PF00696 Amino acid kinase family 11 219 1.1E-26 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS10485 2c66459a0516f5fd43ce840cebcc3015 243 PIRSF PIRSF005650 4 243 4.7E-89 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 VCLMA_RS10485 2c66459a0516f5fd43ce840cebcc3015 243 Gene3D G3DSA:3.40.1160.10 2 240 3.7E-87 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 Pfam PF02541 Ppx/GppA phosphatase family 24 306 1.0E-86 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 SUPERFAMILY SSF109604 311 499 2.76E-48 T 22-04-2016 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 PIRSF PIRSF001267 1 500 1.0E-204 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 PANTHER PTHR30005:SF4 1 500 1.8E-239 T 22-04-2016 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 SUPERFAMILY SSF53067 135 307 9.72E-48 T 22-04-2016 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 PANTHER PTHR30005 1 500 1.8E-239 T 22-04-2016 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 Gene3D G3DSA:3.30.420.150 130 307 4.4E-56 T 22-04-2016 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 Gene3D G3DSA:3.30.420.40 4 129 5.7E-44 T 22-04-2016 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 10 304 2.8E-105 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VCLMA_RS03520 dd98fee10fbf96191a3e3b163f62ef99 500 SUPERFAMILY SSF53067 11 131 1.41E-36 T 22-04-2016 VCLMA_RS07005 40ee6aacfe88ef0a7dd748ddc4802a89 355 SUPERFAMILY SSF81342 120 334 4.55E-46 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VCLMA_RS07005 40ee6aacfe88ef0a7dd748ddc4802a89 355 PANTHER PTHR30074 33 345 1.2E-182 T 22-04-2016 VCLMA_RS07005 40ee6aacfe88ef0a7dd748ddc4802a89 355 Gene3D G3DSA:1.20.950.20 120 335 4.7E-64 T 22-04-2016 VCLMA_RS07005 40ee6aacfe88ef0a7dd748ddc4802a89 355 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 123 328 2.7E-89 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VCLMA_RS07005 40ee6aacfe88ef0a7dd748ddc4802a89 355 PANTHER PTHR30074:SF2 33 345 1.2E-182 T 22-04-2016 VCLMA_RS07005 40ee6aacfe88ef0a7dd748ddc4802a89 355 Pfam PF01292 Prokaryotic cytochrome b561 126 307 1.1E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VCLMA_RS03980 9e107b1f76e3650d4b3af42ca9a5c41a 101 PANTHER PTHR37483 3 99 1.6E-42 T 22-04-2016 VCLMA_RS03980 9e107b1f76e3650d4b3af42ca9a5c41a 101 PANTHER PTHR37483:SF1 3 99 1.6E-42 T 22-04-2016 VCLMA_RS03980 9e107b1f76e3650d4b3af42ca9a5c41a 101 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 25.351 T 22-04-2016 IPR005346 RnfH protein VCLMA_RS03980 9e107b1f76e3650d4b3af42ca9a5c41a 101 SUPERFAMILY SSF54285 4 80 6.67E-26 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VCLMA_RS03980 9e107b1f76e3650d4b3af42ca9a5c41a 101 Pfam PF03658 RnfH family Ubiquitin 6 88 2.5E-34 T 22-04-2016 IPR005346 RnfH protein VCLMA_RS03980 9e107b1f76e3650d4b3af42ca9a5c41a 101 Gene3D G3DSA:3.10.20.280 2 90 1.4E-37 T 22-04-2016 IPR005346 RnfH protein VCLMA_RS04415 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 25.9 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 VCLMA_RS04415 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 SUPERFAMILY SSF117991 7 92 1.7E-30 T 22-04-2016 IPR027471 YbeD-like domain VCLMA_RS04415 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 PANTHER PTHR38036:SF1 4 92 2.0E-42 T 22-04-2016 VCLMA_RS04415 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.1E-29 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 VCLMA_RS04415 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 Gene3D G3DSA:3.30.70.1460 8 92 1.2E-35 T 22-04-2016 IPR027471 YbeD-like domain VCLMA_RS04415 3bfa48a7b14bf46d9cfa5a8bf593f16e 92 PANTHER PTHR38036 4 92 2.0E-42 T 22-04-2016 VCLMA_RS05335 cfd9c9e7346153c34f09c73c9525bd52 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 7.3E-122 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VCLMA_RS05335 cfd9c9e7346153c34f09c73c9525bd52 346 Gene3D G3DSA:3.40.640.10 40 249 1.2E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS05335 cfd9c9e7346153c34f09c73c9525bd52 346 Pfam PF00155 Aminotransferase class I and II 42 339 2.4E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VCLMA_RS05335 cfd9c9e7346153c34f09c73c9525bd52 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 VCLMA_RS05335 cfd9c9e7346153c34f09c73c9525bd52 346 PANTHER PTHR11751:SF398 3 338 4.4E-98 T 22-04-2016 VCLMA_RS05335 cfd9c9e7346153c34f09c73c9525bd52 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 53.405 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 VCLMA_RS05335 cfd9c9e7346153c34f09c73c9525bd52 346 Gene3D G3DSA:3.90.1150.10 250 344 1.3E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS05335 cfd9c9e7346153c34f09c73c9525bd52 346 PANTHER PTHR11751 3 338 4.4E-98 T 22-04-2016 VCLMA_RS05335 cfd9c9e7346153c34f09c73c9525bd52 346 SUPERFAMILY SSF53383 11 344 3.71E-75 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS08250 355d3a19650719da3ab43cbba1ffb81e 169 PANTHER PTHR35011 1 150 1.0E-44 T 22-04-2016 VCLMA_RS08250 355d3a19650719da3ab43cbba1ffb81e 169 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 150 1.5E-26 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VCLMA_RS08250 355d3a19650719da3ab43cbba1ffb81e 169 PANTHER PTHR35011:SF2 1 150 1.0E-44 T 22-04-2016 VCLMA_RS08190 355d3a19650719da3ab43cbba1ffb81e 169 PANTHER PTHR35011 1 150 1.0E-44 T 22-04-2016 VCLMA_RS08190 355d3a19650719da3ab43cbba1ffb81e 169 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 150 1.5E-26 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VCLMA_RS08190 355d3a19650719da3ab43cbba1ffb81e 169 PANTHER PTHR35011:SF2 1 150 1.0E-44 T 22-04-2016 VCLMA_RS02280 a3795d687267e4e464a1ae01baac56ac 90 Gene3D G3DSA:1.10.3880.10 1 89 4.9E-45 T 22-04-2016 VCLMA_RS02280 a3795d687267e4e464a1ae01baac56ac 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.7E-42 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VCLMA_RS02280 a3795d687267e4e464a1ae01baac56ac 90 PIRSF PIRSF029827 1 90 1.4E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VCLMA_RS02280 a3795d687267e4e464a1ae01baac56ac 90 SUPERFAMILY SSF111148 1 89 1.83E-41 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VCLMA_RS02280 a3795d687267e4e464a1ae01baac56ac 90 PANTHER PTHR36965 2 88 2.8E-55 T 22-04-2016 VCLMA_RS02280 a3795d687267e4e464a1ae01baac56ac 90 PANTHER PTHR36965:SF1 2 88 2.8E-55 T 22-04-2016 VCLMA_RS02280 a3795d687267e4e464a1ae01baac56ac 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.388 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VCLMA_RS02280 a3795d687267e4e464a1ae01baac56ac 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 1.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 Pfam PF03471 Transporter associated domain 344 419 8.6E-17 T 22-04-2016 IPR005170 Transporter-associated domain VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 SUPERFAMILY SSF54631 192 329 1.06E-23 T 22-04-2016 VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 Pfam PF00571 CBS domain 278 326 6.0E-4 T 22-04-2016 IPR000644 CBS domain VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 Gene3D G3DSA:3.10.580.10 192 330 1.8E-12 T 22-04-2016 VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 Gene3D G3DSA:3.30.465.10 340 418 2.1E-22 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 PANTHER PTHR22777:SF3 2 418 1.5E-155 T 22-04-2016 VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 SMART SM01091 342 420 7.3E-23 T 22-04-2016 IPR005170 Transporter-associated domain VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 PANTHER PTHR22777 2 418 1.5E-155 T 22-04-2016 VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 Pfam PF01595 Domain of unknown function DUF21 13 181 1.3E-49 T 22-04-2016 IPR002550 Domain of unknown function DUF21 VCLMA_RS02730 13f6939378b0a8ec1b5de8f90b198181 426 SUPERFAMILY SSF56176 340 421 4.36E-20 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 VCLMA_RS02075 8d59db77a37e47105d7fce6fc1b129fc 189 Pfam PF13633 Prokaryotic N-terminal methylation site 9 32 1.2E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02075 8d59db77a37e47105d7fce6fc1b129fc 189 SUPERFAMILY SSF54523 12 95 6.28E-5 T 22-04-2016 VCLMA_RS02075 8d59db77a37e47105d7fce6fc1b129fc 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 8.4E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02075 8d59db77a37e47105d7fce6fc1b129fc 189 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS10650 06d4fe804c124940ca277c83714d4c85 257 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 250 5.1E-96 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VCLMA_RS10650 06d4fe804c124940ca277c83714d4c85 257 PANTHER PTHR37838 1 257 5.0E-110 T 22-04-2016 VCLMA_RS10650 06d4fe804c124940ca277c83714d4c85 257 Pfam PF04205 FMN-binding domain 144 239 1.8E-15 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VCLMA_RS10650 06d4fe804c124940ca277c83714d4c85 257 PIRSF PIRSF009437 1 257 9.5E-110 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VCLMA_RS10650 06d4fe804c124940ca277c83714d4c85 257 SMART SM00900 144 242 2.4E-33 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 VCLMA_RS10650 06d4fe804c124940ca277c83714d4c85 257 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 254 36.596 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 VCLMA_RS10650 06d4fe804c124940ca277c83714d4c85 257 PANTHER PTHR37838:SF1 1 257 5.0E-110 T 22-04-2016 VCLMA_RS09705 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 SUPERFAMILY SSF46785 5 134 1.43E-43 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09705 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 Pfam PF01475 Ferric uptake regulator family 11 130 7.5E-47 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VCLMA_RS09705 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 PANTHER PTHR33202 1 133 2.1E-45 T 22-04-2016 VCLMA_RS09705 c00b3eaca7fc9e22b4c19d3dbe4a0f14 150 Gene3D G3DSA:1.10.10.10 2 82 1.0E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09840 f4f6c2687c5024c757fb72a8f708d157 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 102 6.1E-20 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VCLMA_RS09840 f4f6c2687c5024c757fb72a8f708d157 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 2.2E-12 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VCLMA_RS09840 f4f6c2687c5024c757fb72a8f708d157 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 2.2E-12 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VCLMA_RS09840 f4f6c2687c5024c757fb72a8f708d157 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 2.2E-12 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VCLMA_RS09840 f4f6c2687c5024c757fb72a8f708d157 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.35 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VCLMA_RS09840 f4f6c2687c5024c757fb72a8f708d157 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 6.3E-30 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VCLMA_RS09840 f4f6c2687c5024c757fb72a8f708d157 103 PANTHER PTHR34653 5 103 2.6E-27 T 22-04-2016 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 158 2.2E-72 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 51.523 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 SUPERFAMILY SSF46557 3 78 4.58E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 Gene3D G3DSA:3.10.50.30 76 156 9.1E-26 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 PANTHER PTHR30437:SF6 2 164 5.5E-92 T 22-04-2016 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.1E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 PANTHER PTHR30437 2 164 5.5E-92 T 22-04-2016 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 Gene3D G3DSA:1.10.287.180 3 75 9.5E-24 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 27.049 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 PIRSF PIRSF006092 1 158 4.3E-44 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 SUPERFAMILY SSF54534 80 156 6.8E-19 T 22-04-2016 VCLMA_RS12645 806ed40c34f7ba22a6db4decd44e0e6d 169 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 3.4E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 Gene3D G3DSA:3.40.50.980 9 165 5.7E-25 T 22-04-2016 VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 22-04-2016 IPR020845 AMP-binding, conserved site VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 32 462 5.8E-164 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 PANTHER PTHR24096:SF109 10 463 2.2E-199 T 22-04-2016 VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 Gene3D G3DSA:2.30.38.10 318 368 5.7E-5 T 22-04-2016 VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 PANTHER PTHR24096 10 463 2.2E-199 T 22-04-2016 VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 Gene3D G3DSA:3.40.50.980 166 302 2.9E-26 T 22-04-2016 VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 Gene3D G3DSA:3.30.300.30 369 465 6.2E-17 T 22-04-2016 VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 SUPERFAMILY SSF56801 8 468 1.06E-85 T 22-04-2016 VCLMA_RS09050 9915c49103df7cf6da743766690b3519 476 Pfam PF00501 AMP-binding enzyme 15 374 4.8E-51 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS01630 a3ba360a280a6dc56071446a9401023a 346 PANTHER PTHR21091:SF2 7 342 6.2E-160 T 22-04-2016 VCLMA_RS01630 a3ba360a280a6dc56071446a9401023a 346 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 133 149 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS01630 a3ba360a280a6dc56071446a9401023a 346 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 1 339 3.9E-142 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS01630 a3ba360a280a6dc56071446a9401023a 346 PANTHER PTHR21091 7 342 6.2E-160 T 22-04-2016 VCLMA_RS01630 a3ba360a280a6dc56071446a9401023a 346 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 1 341 50.249 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS01630 a3ba360a280a6dc56071446a9401023a 346 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 13 22 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS01630 a3ba360a280a6dc56071446a9401023a 346 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 1 339 5.9E-140 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 VCLMA_RS01630 a3ba360a280a6dc56071446a9401023a 346 Gene3D G3DSA:3.20.20.210 1 343 2.2E-151 T 22-04-2016 VCLMA_RS01630 a3ba360a280a6dc56071446a9401023a 346 SUPERFAMILY SSF51726 1 344 1.74E-119 T 22-04-2016 VCLMA_RS11810 d5299ac5414ecbd9183172d4229398cc 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 64 259 5.5E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS11810 d5299ac5414ecbd9183172d4229398cc 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 362 516 1.3E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS11810 d5299ac5414ecbd9183172d4229398cc 530 PANTHER PTHR30183 2 528 3.5E-277 T 22-04-2016 VCLMA_RS11810 d5299ac5414ecbd9183172d4229398cc 530 SUPERFAMILY SSF161098 277 522 2.07E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS11810 d5299ac5414ecbd9183172d4229398cc 530 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 11 517 4.1E-165 T 22-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VCLMA_RS11810 d5299ac5414ecbd9183172d4229398cc 530 SUPERFAMILY SSF161098 11 256 2.71E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS11810 d5299ac5414ecbd9183172d4229398cc 530 Gene3D G3DSA:1.10.3720.10 283 523 1.0E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS11810 d5299ac5414ecbd9183172d4229398cc 530 Gene3D G3DSA:1.10.3720.10 12 258 3.5E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS11810 d5299ac5414ecbd9183172d4229398cc 530 PANTHER PTHR30183:SF8 2 528 3.5E-277 T 22-04-2016 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 3.8E-61 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 SUPERFAMILY SSF53098 3 156 2.17E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 48.104 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 2.8E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.8E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 2.8E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.8E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.8E-42 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 8.6E-74 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 PANTHER PTHR30194 1 169 6.4E-73 T 22-04-2016 VCLMA_RS08470 300e47d6e5fb2eae1cfc88fd9cde3d5e 173 Gene3D G3DSA:3.30.420.10 3 156 3.5E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS09290 c5409457fcbe82eac8fe31a9aac1b431 78 Gene3D G3DSA:1.10.1200.10 3 76 1.9E-35 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS09290 c5409457fcbe82eac8fe31a9aac1b431 78 SUPERFAMILY SSF47336 2 76 7.07E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS09290 c5409457fcbe82eac8fe31a9aac1b431 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.4E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS09290 c5409457fcbe82eac8fe31a9aac1b431 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.8E-37 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VCLMA_RS09290 c5409457fcbe82eac8fe31a9aac1b431 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.852 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 VCLMA_RS09290 c5409457fcbe82eac8fe31a9aac1b431 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site VCLMA_RS09290 c5409457fcbe82eac8fe31a9aac1b431 78 PANTHER PTHR20863 4 78 9.6E-32 T 22-04-2016 VCLMA_RS06895 e290809b4089e5b93d3186610934a619 80 PANTHER PTHR34386:SF2 1 78 8.0E-40 T 22-04-2016 VCLMA_RS06895 e290809b4089e5b93d3186610934a619 80 SUPERFAMILY SSF52833 2 74 2.19E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS06895 e290809b4089e5b93d3186610934a619 80 Gene3D G3DSA:3.40.30.10 2 78 1.6E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS06895 e290809b4089e5b93d3186610934a619 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 72 4.1E-20 T 22-04-2016 IPR008554 Glutaredoxin-like VCLMA_RS06895 e290809b4089e5b93d3186610934a619 80 PANTHER PTHR34386 1 78 8.0E-40 T 22-04-2016 VCLMA_RS01365 6273b6ba19c014e729c924181943abcb 680 PANTHER PTHR32552:SF10 17 680 4.4E-126 T 22-04-2016 VCLMA_RS01365 6273b6ba19c014e729c924181943abcb 680 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 680 4.6E-108 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 VCLMA_RS01365 6273b6ba19c014e729c924181943abcb 680 Gene3D G3DSA:2.170.130.10 39 152 7.7E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VCLMA_RS01365 6273b6ba19c014e729c924181943abcb 680 Pfam PF00593 TonB dependent receptor 444 679 2.2E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VCLMA_RS01365 6273b6ba19c014e729c924181943abcb 680 SUPERFAMILY SSF56935 18 680 3.41E-125 T 22-04-2016 VCLMA_RS01365 6273b6ba19c014e729c924181943abcb 680 PANTHER PTHR32552 17 680 4.4E-126 T 22-04-2016 VCLMA_RS01365 6273b6ba19c014e729c924181943abcb 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 146 5.5E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 VCLMA_RS01365 6273b6ba19c014e729c924181943abcb 680 Gene3D G3DSA:2.40.170.20 161 680 2.6E-135 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 VCLMA_RS01365 6273b6ba19c014e729c924181943abcb 680 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 663 680 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site VCLMA_RS07510 8f2a4a2efe2b5430b64d4bec0dff2363 168 PANTHER PTHR30399 1 163 1.7E-103 T 22-04-2016 VCLMA_RS07510 8f2a4a2efe2b5430b64d4bec0dff2363 168 PANTHER PTHR30399:SF4 1 163 1.7E-103 T 22-04-2016 VCLMA_RS07510 8f2a4a2efe2b5430b64d4bec0dff2363 168 Pfam PF01863 Protein of unknown function DUF45 97 150 1.8E-10 T 22-04-2016 IPR002725 Protein of unknown function DUF45 VCLMA_RS12420 ca7dc3f90c5bc3f84e446e7fda8a8d21 146 Pfam PF05656 Protein of unknown function (DUF805) 8 140 2.8E-22 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 VCLMA_RS12420 ca7dc3f90c5bc3f84e446e7fda8a8d21 146 PANTHER PTHR34980 1 144 7.7E-40 T 22-04-2016 VCLMA_RS12420 ca7dc3f90c5bc3f84e446e7fda8a8d21 146 PANTHER PTHR34980:SF1 1 144 7.7E-40 T 22-04-2016 VCLMA_RS02620 bcc298307adc6c01d5a4d95f7cf25d13 152 Gene3D G3DSA:1.10.10.10 100 148 1.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02620 bcc298307adc6c01d5a4d95f7cf25d13 152 Pfam PF02631 RecX family 30 147 2.5E-32 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VCLMA_RS02620 bcc298307adc6c01d5a4d95f7cf25d13 152 PANTHER PTHR33602:SF1 9 152 7.4E-46 T 22-04-2016 VCLMA_RS02620 bcc298307adc6c01d5a4d95f7cf25d13 152 Gene3D G3DSA:1.10.10.10 7 53 6.2E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02620 bcc298307adc6c01d5a4d95f7cf25d13 152 PANTHER PTHR33602 9 152 7.4E-46 T 22-04-2016 VCLMA_RS02620 bcc298307adc6c01d5a4d95f7cf25d13 152 Gene3D G3DSA:1.10.10.10 54 98 2.3E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02620 bcc298307adc6c01d5a4d95f7cf25d13 152 Hamap MF_01114 Regulatory protein RecX [recX]. 2 152 14.393 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 Gene3D G3DSA:3.40.50.1270 175 371 2.3E-80 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PANTHER PTHR11406 1 387 2.8E-195 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 Pfam PF00162 Phosphoglycerate kinase 8 373 7.2E-137 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 Gene3D G3DSA:3.40.50.1260 5 174 2.0E-63 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 383 38.528 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PIRSF PIRSF000724 1 387 7.2E-135 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 3.8E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 3.8E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 3.8E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 3.8E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 3.8E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 3.8E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 3.8E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 3.8E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 3.8E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS02415 040ab3d034b5b057e306fb2ab3ac9820 387 SUPERFAMILY SSF53748 4 382 3.18E-143 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 VCLMA_RS09815 dbfee1fee3be970baf9873c99c83f20e 147 Pfam PF02050 Flagellar FliJ protein 17 140 2.2E-30 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VCLMA_RS09815 dbfee1fee3be970baf9873c99c83f20e 147 PANTHER PTHR38786 1 147 1.7E-49 T 22-04-2016 VCLMA_RS09815 dbfee1fee3be970baf9873c99c83f20e 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 1.4E-33 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VCLMA_RS08400 d5af9501e07ebbbfc823516547e7209d 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 66.877 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VCLMA_RS08400 d5af9501e07ebbbfc823516547e7209d 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 29 341 7.5E-114 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VCLMA_RS08400 d5af9501e07ebbbfc823516547e7209d 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 3.0E-101 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 VCLMA_RS08400 d5af9501e07ebbbfc823516547e7209d 353 SUPERFAMILY SSF142754 29 341 2.09E-106 T 22-04-2016 VCLMA_RS08400 d5af9501e07ebbbfc823516547e7209d 353 PANTHER PTHR30573 1 352 1.0E-167 T 22-04-2016 VCLMA_RS12555 6c47a70897d4d86f65dfebff1d1c82e3 312 SUPERFAMILY SSF55073 160 309 3.69E-39 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS12555 6c47a70897d4d86f65dfebff1d1c82e3 312 PANTHER PTHR10799:SF750 59 309 1.8E-25 T 22-04-2016 VCLMA_RS12555 6c47a70897d4d86f65dfebff1d1c82e3 312 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 152 310 6.1E-34 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS12555 6c47a70897d4d86f65dfebff1d1c82e3 312 Gene3D G3DSA:3.30.450.20 24 126 3.4E-6 T 22-04-2016 VCLMA_RS12555 6c47a70897d4d86f65dfebff1d1c82e3 312 SMART SM00267 144 311 3.3E-36 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS12555 6c47a70897d4d86f65dfebff1d1c82e3 312 SUPERFAMILY SSF55785 22 125 9.71E-6 T 22-04-2016 IPR000014 PAS domain VCLMA_RS12555 6c47a70897d4d86f65dfebff1d1c82e3 312 PANTHER PTHR10799 59 309 1.8E-25 T 22-04-2016 VCLMA_RS12555 6c47a70897d4d86f65dfebff1d1c82e3 312 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 307 7.7E-32 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS12555 6c47a70897d4d86f65dfebff1d1c82e3 312 Gene3D G3DSA:3.30.70.270 157 309 2.0E-40 T 22-04-2016 VCLMA_RS01625 476438529df8f325a4f6dd744a8220a2 269 Pfam PF00293 NUDIX domain 144 245 1.7E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 VCLMA_RS01625 476438529df8f325a4f6dd744a8220a2 269 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 108 136 2.4E-9 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VCLMA_RS01625 476438529df8f325a4f6dd744a8220a2 269 PANTHER PTHR22769:SF7 97 268 7.2E-58 T 22-04-2016 VCLMA_RS01625 476438529df8f325a4f6dd744a8220a2 269 ProSitePatterns PS00893 Nudix box signature. 171 192 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VCLMA_RS01625 476438529df8f325a4f6dd744a8220a2 269 SUPERFAMILY SSF55811 70 255 5.77E-43 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS01625 476438529df8f325a4f6dd744a8220a2 269 Hamap MF_00297 NADH pyrophosphatase [nudC]. 10 269 45.403 T 22-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 VCLMA_RS01625 476438529df8f325a4f6dd744a8220a2 269 Gene3D G3DSA:3.90.79.10 105 260 4.1E-42 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 VCLMA_RS01625 476438529df8f325a4f6dd744a8220a2 269 PANTHER PTHR22769 97 268 7.2E-58 T 22-04-2016 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 PANTHER PTHR21000:SF11 406 613 0.0 T 22-04-2016 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 SUPERFAMILY SSF52016 421 608 6.43E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 Pfam PF00920 Dehydratase family 34 604 2.5E-218 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 SUPERFAMILY SSF143975 3 420 7.06E-135 T 22-04-2016 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 8.1E-264 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 PANTHER PTHR21000 406 613 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS00135 10b96479c7343f55fb0f58673f6f16a8 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 44.986 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS09450 476eb1a7db2ac3c2528c6b3ad55911a8 184 PANTHER PTHR10681 2 178 2.5E-75 T 22-04-2016 VCLMA_RS09450 476eb1a7db2ac3c2528c6b3ad55911a8 184 Pfam PF08534 Redoxin 41 163 2.0E-27 T 22-04-2016 IPR013740 Redoxin GO:0016491 VCLMA_RS09450 476eb1a7db2ac3c2528c6b3ad55911a8 184 Gene3D G3DSA:3.40.30.10 10 177 2.3E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS09450 476eb1a7db2ac3c2528c6b3ad55911a8 184 SUPERFAMILY SSF52833 46 177 4.11E-39 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS09450 476eb1a7db2ac3c2528c6b3ad55911a8 184 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VCLMA_RS09450 476eb1a7db2ac3c2528c6b3ad55911a8 184 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 177 3.1E-73 T 22-04-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VCLMA_RS09450 476eb1a7db2ac3c2528c6b3ad55911a8 184 PANTHER PTHR10681:SF107 2 178 2.5E-75 T 22-04-2016 VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SUPERFAMILY SSF51206 23 162 1.22E-31 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 PANTHER PTHR24567:SF28 1 248 4.8E-133 T 22-04-2016 VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Gene3D G3DSA:2.60.120.10 18 169 1.0E-41 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SMART SM00419 187 235 1.1E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 241 1.2E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 1.4E-15 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SUPERFAMILY SSF46785 165 244 4.09E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 SMART SM00100 30 151 1.4E-20 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.56E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.56E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 Gene3D G3DSA:1.10.10.10 170 235 6.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS06755 0339fcb360eaa3e1ee4eb2a3ab9b9286 250 PANTHER PTHR24567 1 248 4.8E-133 T 22-04-2016 VCLMA_RS04625 c0456f668a01979f7010c0569bc1cbc9 165 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 163 2.3E-74 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VCLMA_RS04625 c0456f668a01979f7010c0569bc1cbc9 165 SMART SM00738 1 101 2.5E-29 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VCLMA_RS04625 c0456f668a01979f7010c0569bc1cbc9 165 SUPERFAMILY SSF82679 1 100 5.49E-28 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VCLMA_RS04625 c0456f668a01979f7010c0569bc1cbc9 165 Pfam PF02357 Transcription termination factor nusG 2 91 3.4E-18 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VCLMA_RS04625 c0456f668a01979f7010c0569bc1cbc9 165 PANTHER PTHR30265 1 163 5.5E-58 T 22-04-2016 VCLMA_RS04625 c0456f668a01979f7010c0569bc1cbc9 165 PANTHER PTHR30265:SF3 1 163 5.5E-58 T 22-04-2016 VCLMA_RS04625 c0456f668a01979f7010c0569bc1cbc9 165 Gene3D G3DSA:3.30.70.940 1 99 1.9E-19 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VCLMA_RS04625 c0456f668a01979f7010c0569bc1cbc9 165 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 165 48.268 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 VCLMA_RS04625 c0456f668a01979f7010c0569bc1cbc9 165 SMART SM00739 112 139 0.0065 T 22-04-2016 IPR005824 KOW VCLMA_RS06985 aa51730404bc34de1b5422e3ac58c2a0 353 PANTHER PTHR21225 1 353 3.5E-277 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS06985 aa51730404bc34de1b5422e3ac58c2a0 353 PIRSF PIRSF001361 1 353 1.2E-156 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS06985 aa51730404bc34de1b5422e3ac58c2a0 353 PANTHER PTHR21225:SF6 1 353 3.5E-277 T 22-04-2016 VCLMA_RS06985 aa51730404bc34de1b5422e3ac58c2a0 353 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 350 3.3E-159 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS06985 aa51730404bc34de1b5422e3ac58c2a0 353 Pfam PF00793 DAHP synthetase I family 44 338 1.4E-98 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VCLMA_RS06985 aa51730404bc34de1b5422e3ac58c2a0 353 SUPERFAMILY SSF51569 8 349 2.4E-130 T 22-04-2016 VCLMA_RS06985 aa51730404bc34de1b5422e3ac58c2a0 353 Gene3D G3DSA:3.20.20.70 10 351 5.1E-147 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 SMART SM00525 186 206 1.8E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 Gene3D G3DSA:1.10.340.30 23 122 5.8E-34 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 Gene3D G3DSA:1.10.1670.10 123 208 8.5E-35 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 TIGRFAM TIGR01083 nth: endonuclease III 5 194 1.4E-89 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 6.8E-19 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.675 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 PIRSF PIRSF001435 1 210 6.3E-50 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 Pfam PF00633 Helix-hairpin-helix motif 99 127 2.7E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 SMART SM00478 38 185 1.3E-53 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 SUPERFAMILY SSF48150 4 207 1.38E-71 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.7E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 PANTHER PTHR10359:SF18 1 212 5.4E-92 T 22-04-2016 VCLMA_RS04735 946fceb9ae1cebae3c7680848f7521f4 213 PANTHER PTHR10359 1 212 5.4E-92 T 22-04-2016 VCLMA_RS06250 a29fb2efa11ad570ea58b49e56c04536 160 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 14 87 4.7E-9 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VCLMA_RS06250 a29fb2efa11ad570ea58b49e56c04536 160 Gene3D G3DSA:3.30.420.130 1 90 3.3E-16 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VCLMA_RS06250 a29fb2efa11ad570ea58b49e56c04536 160 SUPERFAMILY SSF53146 1 97 2.88E-18 T 22-04-2016 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VCLMA_RS06990 18739b42cb21cb0d19d7de832d9fa03d 160 SUPERFAMILY SSF89963 88 159 1.36E-28 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VCLMA_RS06990 18739b42cb21cb0d19d7de832d9fa03d 160 SUPERFAMILY SSF89963 2 86 1.05E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VCLMA_RS06990 18739b42cb21cb0d19d7de832d9fa03d 160 Gene3D G3DSA:3.30.70.860 95 159 2.5E-34 T 22-04-2016 VCLMA_RS06990 18739b42cb21cb0d19d7de832d9fa03d 160 Pfam PF04461 Protein of unknown function (DUF520) 2 159 4.5E-63 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VCLMA_RS06990 18739b42cb21cb0d19d7de832d9fa03d 160 PANTHER PTHR30476:SF0 1 160 3.0E-93 T 22-04-2016 VCLMA_RS06990 18739b42cb21cb0d19d7de832d9fa03d 160 Gene3D G3DSA:3.30.70.990 9 94 3.1E-29 T 22-04-2016 VCLMA_RS06990 18739b42cb21cb0d19d7de832d9fa03d 160 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 160 28.689 T 22-04-2016 IPR007551 Protein of unknown function DUF520 VCLMA_RS06990 18739b42cb21cb0d19d7de832d9fa03d 160 PANTHER PTHR30476 1 160 3.0E-93 T 22-04-2016 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 Pfam PF13377 Periplasmic binding protein-like domain 168 302 6.6E-19 T 22-04-2016 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 SUPERFAMILY SSF53822 63 305 2.75E-59 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 Gene3D G3DSA:3.40.50.2300 57 174 5.0E-25 T 22-04-2016 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 SUPERFAMILY SSF47413 3 60 2.87E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 Gene3D G3DSA:1.10.260.40 6 56 5.2E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 303 6.2E-136 T 22-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 SMART SM00354 4 74 6.8E-29 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.4E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 PANTHER PTHR30146:SF42 3 313 2.3E-206 T 22-04-2016 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 PANTHER PTHR30146 3 313 2.3E-206 T 22-04-2016 VCLMA_RS04260 8ec4d522872007ccbcd73f1e5f0b0870 316 Gene3D G3DSA:3.40.50.2300 175 278 2.7E-38 T 22-04-2016 VCLMA_RS02190 e3aad298f1f3d8c38241881c09c62f66 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02190 e3aad298f1f3d8c38241881c09c62f66 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-44 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02190 e3aad298f1f3d8c38241881c09c62f66 103 SUPERFAMILY SSF141091 1 102 9.94E-39 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VCLMA_RS02190 e3aad298f1f3d8c38241881c09c62f66 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.6E-40 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 VCLMA_RS02190 e3aad298f1f3d8c38241881c09c62f66 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.497 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02190 e3aad298f1f3d8c38241881c09c62f66 103 PANTHER PTHR21349 1 101 2.1E-48 T 22-04-2016 VCLMA_RS08215 0ae56fd6addb0a7fecf67e6fc96ac08c 378 PIRSF PIRSF038994 4 378 7.5E-95 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VCLMA_RS08215 0ae56fd6addb0a7fecf67e6fc96ac08c 378 PANTHER PTHR11113 3 374 9.2E-143 T 22-04-2016 VCLMA_RS08215 0ae56fd6addb0a7fecf67e6fc96ac08c 378 Gene3D G3DSA:3.20.20.140 56 347 4.3E-86 T 22-04-2016 VCLMA_RS08215 0ae56fd6addb0a7fecf67e6fc96ac08c 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 5 370 2.0E-85 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VCLMA_RS08215 0ae56fd6addb0a7fecf67e6fc96ac08c 378 SUPERFAMILY SSF51338 4 55 3.93E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 VCLMA_RS08215 0ae56fd6addb0a7fecf67e6fc96ac08c 378 PANTHER PTHR11113:SF7 3 374 9.2E-143 T 22-04-2016 VCLMA_RS08215 0ae56fd6addb0a7fecf67e6fc96ac08c 378 Pfam PF01979 Amidohydrolase family 53 368 2.2E-12 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 VCLMA_RS08215 0ae56fd6addb0a7fecf67e6fc96ac08c 378 SUPERFAMILY SSF51556 56 346 2.92E-84 T 22-04-2016 IPR032466 Metal-dependent hydrolase VCLMA_RS03145 e830100a7e033beca3e41167194477d4 132 Gene3D G3DSA:3.30.300.20 4 119 2.5E-36 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VCLMA_RS03145 e830100a7e033beca3e41167194477d4 132 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VCLMA_RS03145 e830100a7e033beca3e41167194477d4 132 PANTHER PTHR33515 1 131 2.3E-48 T 22-04-2016 VCLMA_RS03145 e830100a7e033beca3e41167194477d4 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 115 2.7E-34 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VCLMA_RS03145 e830100a7e033beca3e41167194477d4 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 8.0E-47 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VCLMA_RS03145 e830100a7e033beca3e41167194477d4 132 Pfam PF02033 Ribosome-binding factor A 7 110 5.4E-30 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VCLMA_RS03145 e830100a7e033beca3e41167194477d4 132 SUPERFAMILY SSF89919 2 105 1.57E-31 T 22-04-2016 IPR023799 Ribosome-binding factor A domain VCLMA_RS03145 e830100a7e033beca3e41167194477d4 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 118 21.06 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 VCLMA_RS06420 73009f8751047fb7d55f9165165a057d 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 8.1E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 VCLMA_RS06420 73009f8751047fb7d55f9165165a057d 365 PANTHER PTHR30085:SF3 63 365 5.1E-188 T 22-04-2016 VCLMA_RS06420 73009f8751047fb7d55f9165165a057d 365 PANTHER PTHR30085 63 365 5.1E-188 T 22-04-2016 VCLMA_RS06420 73009f8751047fb7d55f9165165a057d 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 349 1.4E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06420 73009f8751047fb7d55f9165165a057d 365 SUPERFAMILY SSF161098 155 346 7.59E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06420 73009f8751047fb7d55f9165165a057d 365 Gene3D G3DSA:1.10.3720.10 155 359 6.2E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 Gene3D G3DSA:3.40.1770.10 362 557 8.0E-165 T 22-04-2016 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 Gene3D G3DSA:3.40.1770.10 14 146 8.0E-165 T 22-04-2016 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 Hamap MF_00577 Urocanate hydratase [hutU]. 2 558 49.771 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 Pfam PF01175 Urocanase 17 549 4.9E-261 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 SUPERFAMILY SSF111326 11 557 4.45E-261 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 PANTHER PTHR12216 10 561 0.0 T 22-04-2016 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 PIRSF PIRSF001423 1 563 5.3E-296 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 TIGRFAM TIGR01228 hutU: urocanate hydratase 15 556 1.3E-293 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 PANTHER PTHR12216:SF3 10 561 0.0 T 22-04-2016 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 ProSitePatterns PS01233 Urocanase signature. 444 459 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 VCLMA_RS05665 9b3c0566cda636113cd7afe4cc236542 565 Gene3D G3DSA:3.40.50.10730 147 351 1.2E-90 T 22-04-2016 VCLMA_RS03555 2129b8e0af9cd5021e60b9593def2e01 254 PANTHER PTHR12598 3 253 1.5E-100 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VCLMA_RS03555 2129b8e0af9cd5021e60b9593def2e01 254 Pfam PF03932 CutC family 4 205 8.2E-92 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VCLMA_RS03555 2129b8e0af9cd5021e60b9593def2e01 254 Gene3D G3DSA:3.20.20.380 3 247 5.5E-90 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VCLMA_RS03555 2129b8e0af9cd5021e60b9593def2e01 254 PANTHER PTHR12598:SF0 3 253 1.5E-100 T 22-04-2016 VCLMA_RS03555 2129b8e0af9cd5021e60b9593def2e01 254 SUPERFAMILY SSF110395 4 247 1.44E-70 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 VCLMA_RS03555 2129b8e0af9cd5021e60b9593def2e01 254 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 247 40.389 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 Pfam PF13416 Bacterial extracellular solute-binding protein 36 294 3.4E-22 T 22-04-2016 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 Gene3D G3DSA:3.40.190.10 134 290 4.0E-26 T 22-04-2016 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 111 127 1.5E-15 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 175 1.5E-15 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 241 260 1.5E-15 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 286 312 1.5E-15 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 42 63 1.5E-15 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 26 42 1.5E-15 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 PANTHER PTHR30222:SF10 1 341 1.6E-148 T 22-04-2016 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 SUPERFAMILY SSF53850 22 336 3.05E-56 T 22-04-2016 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 Gene3D G3DSA:3.40.190.10 22 133 7.4E-18 T 22-04-2016 VCLMA_RS03420 6a454f163c88bddb2c079dc25028bfeb 346 PANTHER PTHR30222 1 341 1.6E-148 T 22-04-2016 VCLMA_RS08800 1b7f222c3b1d15872acf903dc22c9738 225 PANTHER PTHR21299 6 225 1.2E-79 T 22-04-2016 VCLMA_RS08800 1b7f222c3b1d15872acf903dc22c9738 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.2E-86 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VCLMA_RS08800 1b7f222c3b1d15872acf903dc22c9738 225 Pfam PF02224 Cytidylate kinase 8 221 1.8E-79 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VCLMA_RS08800 1b7f222c3b1d15872acf903dc22c9738 225 Gene3D G3DSA:3.40.50.300 6 221 4.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08800 1b7f222c3b1d15872acf903dc22c9738 225 SUPERFAMILY SSF52540 6 223 3.07E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08800 1b7f222c3b1d15872acf903dc22c9738 225 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.793 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 PANTHER PTHR21110:SF0 2 406 1.7E-160 T 22-04-2016 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 Gene3D G3DSA:3.30.70.1250 115 234 1.0E-49 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 SUPERFAMILY SSF143856 118 234 2.09E-47 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 1.6E-177 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 SUPERFAMILY SSF53649 1 115 1.31E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 SUPERFAMILY SSF53649 236 406 1.31E-68 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 54.078 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 PIRSF PIRSF001491 1 406 5.2E-160 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 Pfam PF01676 Metalloenzyme superfamily 2 397 5.2E-43 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 PANTHER PTHR21110 2 406 1.7E-160 T 22-04-2016 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 Gene3D G3DSA:3.40.720.10 239 406 1.4E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VCLMA_RS10880 0de93f1f29e90042eccc7ef48ae3f6a7 406 Gene3D G3DSA:3.40.720.10 1 114 1.4E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 VCLMA_RS11960 ce33e3797318e45280fde094b380d2c4 128 SUPERFAMILY SSF64263 1 119 3.4E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11960 ce33e3797318e45280fde094b380d2c4 128 PANTHER PTHR14413 1 119 6.6E-67 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11960 ce33e3797318e45280fde094b380d2c4 128 Gene3D G3DSA:3.90.1030.10 1 117 1.4E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11960 ce33e3797318e45280fde094b380d2c4 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11960 ce33e3797318e45280fde094b380d2c4 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.4E-49 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11960 ce33e3797318e45280fde094b380d2c4 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.737 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11960 ce33e3797318e45280fde094b380d2c4 128 Pfam PF01196 Ribosomal protein L17 20 116 6.8E-35 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357 350 371 5.0E-148 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357 172 331 5.0E-148 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 Gene3D G3DSA:3.20.20.80 38 115 2.6E-83 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 Gene3D G3DSA:3.20.20.80 174 367 2.6E-83 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 Gene3D G3DSA:3.20.20.80 566 593 2.6E-83 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 Gene3D G3DSA:3.20.20.80 412 529 2.6E-83 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 SUPERFAMILY SSF51445 18 593 1.58E-139 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 SUPERFAMILY SSF51011 595 701 3.88E-26 T 22-04-2016 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357:SF99 172 331 5.0E-148 T 22-04-2016 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357:SF99 1 111 5.0E-148 T 22-04-2016 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357:SF99 569 700 5.0E-148 T 22-04-2016 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357:SF99 350 371 5.0E-148 T 22-04-2016 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 TIGRFAM TIGR02103 pullul_strch: alpha-1,6-glucosidases, pullulanase-type 1 700 0.0 T 22-04-2016 IPR011839 Alpha-1,6-glucosidases, pullulanase-type GO:0005975|GO:0051060 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357:SF99 387 543 5.0E-148 T 22-04-2016 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 Pfam PF11852 Domain of unknown function (DUF3372) 531 700 3.0E-48 T 22-04-2016 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357 1 111 5.0E-148 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357 569 700 5.0E-148 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VCLMA_RS12575 8c4d2bb19330c76dd928d6a9c6cf7350 703 PANTHER PTHR10357 387 543 5.0E-148 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 PANTHER PTHR32108:SF0 1 330 3.5E-155 T 22-04-2016 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 SMART SM00662 23 235 4.9E-104 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 2.4E-23 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 4.0E-112 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 Gene3D G3DSA:1.10.150.20 245 329 7.2E-38 T 22-04-2016 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF56553 53 179 5.06E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 22-04-2016 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 PANTHER PTHR32108 1 330 3.5E-155 T 22-04-2016 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 Gene3D G3DSA:3.30.1360.10 9 57 3.0E-10 T 22-04-2016 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 2.6E-24 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF55257 7 53 3.93E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 SUPERFAMILY SSF55257 180 234 3.93E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 5.6E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 Gene3D G3DSA:2.170.120.12 58 178 3.2E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS11965 696bbb50d9c3c3026d08c51e542486e0 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.977 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VCLMA_RS02720 f15bd186c0f3df075311d6bdcb9da1b7 524 SUPERFAMILY SSF55931 8 513 2.35E-202 T 22-04-2016 VCLMA_RS02720 f15bd186c0f3df075311d6bdcb9da1b7 524 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 7 515 6.0E-217 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VCLMA_RS02720 f15bd186c0f3df075311d6bdcb9da1b7 524 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 524 225.217 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VCLMA_RS02720 f15bd186c0f3df075311d6bdcb9da1b7 524 Pfam PF04262 Glutamate-cysteine ligase 13 378 9.1E-168 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 VCLMA_RS02720 f15bd186c0f3df075311d6bdcb9da1b7 524 PANTHER PTHR38761 1 524 0.0 T 22-04-2016 VCLMA_RS16140 d28fec449666d723cf6bb1ca3b08554d 264 Gene3D G3DSA:3.30.70.270 228 263 1.9E-4 T 22-04-2016 VCLMA_RS16140 d28fec449666d723cf6bb1ca3b08554d 264 Pfam PF00990 Diguanylate cyclase, GGDEF domain 227 262 2.9E-5 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS07790 18cf98accd45bc8287906a6b0e9f19d3 193 Pfam PF03352 Methyladenine glycosylase 11 186 5.7E-74 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VCLMA_RS07790 18cf98accd45bc8287906a6b0e9f19d3 193 PANTHER PTHR30037 1 193 5.6E-106 T 22-04-2016 VCLMA_RS07790 18cf98accd45bc8287906a6b0e9f19d3 193 PANTHER PTHR30037:SF4 1 193 5.6E-106 T 22-04-2016 VCLMA_RS07790 18cf98accd45bc8287906a6b0e9f19d3 193 SUPERFAMILY SSF48150 9 189 7.22E-75 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VCLMA_RS07790 18cf98accd45bc8287906a6b0e9f19d3 193 Gene3D G3DSA:1.10.340.30 9 186 1.9E-78 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:1.10.1160.10 263 338 2.5E-39 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 1.4E-294 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:2.40.240.10 462 548 4.2E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 SUPERFAMILY SSF52374 11 337 2.41E-105 T 22-04-2016 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 2.2E-61 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 PANTHER PTHR11451:SF29 7 247 1.1E-240 T 22-04-2016 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 PANTHER PTHR11451:SF29 267 552 1.1E-240 T 22-04-2016 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 7.7E-127 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 SUPERFAMILY SSF50715 340 549 1.83E-78 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.512 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:2.40.240.10 348 461 1.4E-49 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:3.90.800.10 101 209 7.4E-49 T 22-04-2016 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 PANTHER PTHR11451 7 247 1.1E-240 T 22-04-2016 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 PANTHER PTHR11451 267 552 1.1E-240 T 22-04-2016 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:3.40.50.620 212 262 3.9E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS04655 9d85bd5026e85c574ac3696d40ef25ec 556 Gene3D G3DSA:3.40.50.620 27 96 3.9E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS03925 5d38e4e08307d38491f07d8029c2b67e 295 Pfam PF13091 PLD-like domain 170 279 2.0E-11 T 22-04-2016 IPR025202 Phospholipase D-like domain VCLMA_RS03925 5d38e4e08307d38491f07d8029c2b67e 295 Gene3D G3DSA:3.30.870.10 140 281 7.2E-8 T 22-04-2016 VCLMA_RS03925 5d38e4e08307d38491f07d8029c2b67e 295 SUPERFAMILY SSF56024 138 281 6.67E-9 T 22-04-2016 VCLMA_RS10350 6704b9421b96308dbf75dc9bbbb25e30 191 PANTHER PTHR30390 2 190 1.0E-94 T 22-04-2016 VCLMA_RS10350 6704b9421b96308dbf75dc9bbbb25e30 191 Gene3D G3DSA:3.40.50.10490 1 190 9.2E-65 T 22-04-2016 VCLMA_RS10350 6704b9421b96308dbf75dc9bbbb25e30 191 Pfam PF13580 SIS domain 14 146 3.7E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS10350 6704b9421b96308dbf75dc9bbbb25e30 191 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 1.9E-83 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VCLMA_RS10350 6704b9421b96308dbf75dc9bbbb25e30 191 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.311 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 VCLMA_RS10350 6704b9421b96308dbf75dc9bbbb25e30 191 SUPERFAMILY SSF53697 1 188 4.04E-53 T 22-04-2016 VCLMA_RS10350 6704b9421b96308dbf75dc9bbbb25e30 191 PANTHER PTHR30390:SF6 2 190 1.0E-94 T 22-04-2016 VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 Gene3D G3DSA:3.40.192.10 3 110 1.9E-37 T 22-04-2016 VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 PANTHER PTHR21089:SF2 1 275 5.2E-160 T 22-04-2016 VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 115 195 9.0E-14 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 Gene3D G3DSA:3.40.50.720 111 248 4.1E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 SUPERFAMILY SSF53223 6 105 1.38E-32 T 22-04-2016 VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 7 274 8.9E-89 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 PANTHER PTHR21089 1 275 5.2E-160 T 22-04-2016 VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.101 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 SUPERFAMILY SSF51735 106 273 1.16E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00270 b741108d5bc62caa5fc3937e4a86eb6f 278 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 7.8E-24 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 PANTHER PTHR30111 1 287 3.3E-82 T 22-04-2016 VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 SUPERFAMILY SSF64397 3 231 4.97E-76 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 283 33.311 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 PIRSF PIRSF005261 1 282 4.2E-70 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 Gene3D G3DSA:3.55.30.10 2 175 4.0E-65 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 Gene3D G3DSA:1.10.287.480 176 224 3.7E-25 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 PANTHER PTHR30111:SF1 1 287 3.3E-82 T 22-04-2016 VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 Gene3D G3DSA:3.90.1280.10 225 281 8.9E-22 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 SUPERFAMILY SSF118352 224 281 1.24E-17 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VCLMA_RS12750 67f0521da0d4233a9fcbafb186732f0f 291 Pfam PF01430 Hsp33 protein 6 272 2.6E-81 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VCLMA_RS01385 7b7d59080929905aed656df37f07dc75 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 1.6E-247 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 VCLMA_RS01385 7b7d59080929905aed656df37f07dc75 598 SUPERFAMILY SSF52016 418 596 1.33E-52 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VCLMA_RS01385 7b7d59080929905aed656df37f07dc75 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS01385 7b7d59080929905aed656df37f07dc75 598 SUPERFAMILY SSF143975 2 417 1.27E-130 T 22-04-2016 VCLMA_RS01385 7b7d59080929905aed656df37f07dc75 598 PANTHER PTHR21000:SF9 2 597 0.0 T 22-04-2016 VCLMA_RS01385 7b7d59080929905aed656df37f07dc75 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS01385 7b7d59080929905aed656df37f07dc75 598 Pfam PF00920 Dehydratase family 67 594 5.2E-148 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS01385 7b7d59080929905aed656df37f07dc75 598 PANTHER PTHR21000 2 597 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS08945 b814c555e9aab4e280404ad577ed928d 296 PANTHER PTHR30537:SF5 1 291 5.6E-120 T 22-04-2016 VCLMA_RS08945 b814c555e9aab4e280404ad577ed928d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.2E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS08945 b814c555e9aab4e280404ad577ed928d 296 Gene3D G3DSA:1.10.10.10 4 81 2.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08945 b814c555e9aab4e280404ad577ed928d 296 PANTHER PTHR30537 1 291 5.6E-120 T 22-04-2016 VCLMA_RS08945 b814c555e9aab4e280404ad577ed928d 296 Gene3D G3DSA:3.40.190.10 178 261 2.7E-8 T 22-04-2016 VCLMA_RS08945 b814c555e9aab4e280404ad577ed928d 296 SUPERFAMILY SSF53850 90 294 1.21E-40 T 22-04-2016 VCLMA_RS08945 b814c555e9aab4e280404ad577ed928d 296 Pfam PF03466 LysR substrate binding domain 89 291 2.1E-36 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS08945 b814c555e9aab4e280404ad577ed928d 296 SUPERFAMILY SSF46785 3 113 1.82E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS08945 b814c555e9aab4e280404ad577ed928d 296 Gene3D G3DSA:3.40.190.10 93 177 2.1E-18 T 22-04-2016 VCLMA_RS11260 9c480df61dbb0f5cc0c0baebc3617da9 195 SUPERFAMILY SSF53474 6 193 3.67E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS11260 9c480df61dbb0f5cc0c0baebc3617da9 195 Pfam PF05728 Uncharacterised protein family (UPF0227) 8 193 2.7E-77 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VCLMA_RS11260 9c480df61dbb0f5cc0c0baebc3617da9 195 Gene3D G3DSA:3.40.50.1820 134 185 4.9E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS11260 9c480df61dbb0f5cc0c0baebc3617da9 195 Gene3D G3DSA:3.40.50.1820 5 102 4.9E-20 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS11260 9c480df61dbb0f5cc0c0baebc3617da9 195 PANTHER PTHR35602:SF3 2 195 5.1E-124 T 22-04-2016 VCLMA_RS11260 9c480df61dbb0f5cc0c0baebc3617da9 195 PANTHER PTHR35602 2 195 5.1E-124 T 22-04-2016 VCLMA_RS10550 7966a78e252e15dbffa09e5288256e3c 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.6E-72 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VCLMA_RS10550 7966a78e252e15dbffa09e5288256e3c 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 90.301 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VCLMA_RS10550 7966a78e252e15dbffa09e5288256e3c 149 PANTHER PTHR30455:SF2 2 149 2.7E-75 T 22-04-2016 VCLMA_RS10550 7966a78e252e15dbffa09e5288256e3c 149 PANTHER PTHR30455 2 149 2.7E-75 T 22-04-2016 VCLMA_RS10550 7966a78e252e15dbffa09e5288256e3c 149 Pfam PF03477 ATP cone domain 50 136 2.2E-16 T 22-04-2016 IPR005144 ATP-cone domain VCLMA_RS03065 935b13428e1f30e91da46782d81d0885 433 Gene3D G3DSA:2.70.70.10 253 394 3.7E-44 T 22-04-2016 VCLMA_RS03065 935b13428e1f30e91da46782d81d0885 433 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 31 1.1E-7 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal VCLMA_RS03065 935b13428e1f30e91da46782d81d0885 433 PANTHER PTHR21666 1 420 6.9E-145 T 22-04-2016 VCLMA_RS03065 935b13428e1f30e91da46782d81d0885 433 SUPERFAMILY SSF51261 147 393 4.66E-70 T 22-04-2016 IPR011055 Duplicated hybrid motif VCLMA_RS03065 935b13428e1f30e91da46782d81d0885 433 Pfam PF01551 Peptidase family M23 298 392 4.6E-30 T 22-04-2016 IPR016047 Peptidase M23 VCLMA_RS03065 935b13428e1f30e91da46782d81d0885 433 PANTHER PTHR21666:SF221 1 420 6.9E-145 T 22-04-2016 VCLMA_RS06720 a5f4022a1268f723479d54681e0984c5 286 PANTHER PTHR30193 2 286 1.9E-130 T 22-04-2016 VCLMA_RS06720 a5f4022a1268f723479d54681e0984c5 286 PANTHER PTHR30193:SF10 2 286 1.9E-130 T 22-04-2016 VCLMA_RS06720 a5f4022a1268f723479d54681e0984c5 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 1.6E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06720 a5f4022a1268f723479d54681e0984c5 286 SUPERFAMILY SSF161098 10 275 1.44E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06720 a5f4022a1268f723479d54681e0984c5 286 Gene3D G3DSA:1.10.3720.10 5 272 7.1E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02070 fd4ea9f7f8538e71bad5dd508f196659 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 7.1E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02070 fd4ea9f7f8538e71bad5dd508f196659 162 SUPERFAMILY SSF54523 8 101 1.49E-12 T 22-04-2016 VCLMA_RS02070 fd4ea9f7f8538e71bad5dd508f196659 162 Gene3D G3DSA:3.30.700.10 8 84 2.7E-5 T 22-04-2016 VCLMA_RS02070 fd4ea9f7f8538e71bad5dd508f196659 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 24 1.5E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS11895 05899206e2b45705f05b08736c5a5755 299 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 1.3E-85 T 22-04-2016 IPR021254 Protein of unknown function DUF2806 VCLMA_RS11895 05899206e2b45705f05b08736c5a5755 299 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 286 7.7E-110 T 22-04-2016 IPR021254 Protein of unknown function DUF2806 VCLMA_RS01280 c807be809bec479197c97c3eb103d7b1 190 PANTHER PTHR42160:SF1 1 190 3.0E-98 T 22-04-2016 VCLMA_RS01280 c807be809bec479197c97c3eb103d7b1 190 Pfam PF03167 Uracil DNA glycosylase superfamily 31 178 7.6E-24 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VCLMA_RS01280 c807be809bec479197c97c3eb103d7b1 190 PANTHER PTHR42160 1 190 3.0E-98 T 22-04-2016 VCLMA_RS01280 c807be809bec479197c97c3eb103d7b1 190 SMART SM00986 26 182 3.3E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VCLMA_RS01280 c807be809bec479197c97c3eb103d7b1 190 SUPERFAMILY SSF52141 2 189 2.03E-55 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VCLMA_RS01280 c807be809bec479197c97c3eb103d7b1 190 Gene3D G3DSA:3.40.470.10 2 189 1.9E-43 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like VCLMA_RS01280 c807be809bec479197c97c3eb103d7b1 190 SMART SM00987 26 182 3.3E-26 T 22-04-2016 VCLMA_RS08980 4b85e049a5ce7f1649f0aa3cddebeb06 323 Pfam PF13406 Transglycosylase SLT domain 23 319 3.6E-110 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 VCLMA_RS08980 4b85e049a5ce7f1649f0aa3cddebeb06 323 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 322 4.5E-112 T 22-04-2016 IPR011970 Lytic murein transglycosylase VCLMA_RS08980 4b85e049a5ce7f1649f0aa3cddebeb06 323 Gene3D G3DSA:1.10.530.10 205 322 1.3E-60 T 22-04-2016 VCLMA_RS08980 4b85e049a5ce7f1649f0aa3cddebeb06 323 Gene3D G3DSA:1.10.530.10 68 124 1.3E-60 T 22-04-2016 VCLMA_RS08980 4b85e049a5ce7f1649f0aa3cddebeb06 323 SUPERFAMILY SSF53955 8 322 4.22E-102 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS08980 4b85e049a5ce7f1649f0aa3cddebeb06 323 PANTHER PTHR30163 4 322 3.5E-144 T 22-04-2016 IPR011757 Lytic transglycosylase MltB VCLMA_RS08980 4b85e049a5ce7f1649f0aa3cddebeb06 323 PANTHER PTHR30163:SF2 4 322 3.5E-144 T 22-04-2016 VCLMA_RS01420 b5d38bead82d7e8e5ae94df98cf9d817 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 75.257 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VCLMA_RS01420 b5d38bead82d7e8e5ae94df98cf9d817 150 Pfam PF01220 Dehydroquinase class II 6 142 9.3E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VCLMA_RS01420 b5d38bead82d7e8e5ae94df98cf9d817 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VCLMA_RS01420 b5d38bead82d7e8e5ae94df98cf9d817 150 SUPERFAMILY SSF52304 6 147 1.24E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VCLMA_RS01420 b5d38bead82d7e8e5ae94df98cf9d817 150 PIRSF PIRSF001399 3 149 9.5E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VCLMA_RS01420 b5d38bead82d7e8e5ae94df98cf9d817 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 143 8.0E-67 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VCLMA_RS01420 b5d38bead82d7e8e5ae94df98cf9d817 150 PANTHER PTHR21272 2 149 2.3E-92 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VCLMA_RS01420 b5d38bead82d7e8e5ae94df98cf9d817 150 Gene3D G3DSA:3.40.50.9100 4 147 2.6E-69 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VCLMA_RS01420 b5d38bead82d7e8e5ae94df98cf9d817 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 2.3E-67 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 VCLMA_RS08610 02783cae6a82fe084e1e3b7933c6f2c0 252 Pfam PF02348 Cytidylyltransferase 5 221 7.0E-66 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VCLMA_RS08610 02783cae6a82fe084e1e3b7933c6f2c0 252 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.977 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VCLMA_RS08610 02783cae6a82fe084e1e3b7933c6f2c0 252 SUPERFAMILY SSF53448 3 246 2.7E-66 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS08610 02783cae6a82fe084e1e3b7933c6f2c0 252 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.8E-116 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VCLMA_RS08610 02783cae6a82fe084e1e3b7933c6f2c0 252 PANTHER PTHR21485 1 250 2.4E-129 T 22-04-2016 VCLMA_RS08610 02783cae6a82fe084e1e3b7933c6f2c0 252 PANTHER PTHR21485:SF4 1 250 2.4E-129 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 VCLMA_RS08610 02783cae6a82fe084e1e3b7933c6f2c0 252 Gene3D G3DSA:3.90.550.10 1 249 5.6E-89 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 Pfam PF01964 Radical SAM ThiC family 144 593 5.9E-200 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 Pfam PF13667 ThiC-associated domain 22 103 1.4E-32 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 PANTHER PTHR30557 3 102 0.0 T 22-04-2016 VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 PANTHER PTHR30557 136 166 0.0 T 22-04-2016 VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 PANTHER PTHR30557 194 646 0.0 T 22-04-2016 VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 PANTHER PTHR30557:SF1 3 102 0.0 T 22-04-2016 VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 PANTHER PTHR30557:SF1 136 166 0.0 T 22-04-2016 VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 PANTHER PTHR30557:SF1 194 646 0.0 T 22-04-2016 VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 596 1.0E-218 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VCLMA_RS00320 c790ccbc289850751b3a40621e6d0163 646 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 598 55.973 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 VCLMA_RS03685 b01103f0bafefe7d10c4464210550b8f 374 Gene3D G3DSA:3.20.20.70 30 132 4.5E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS03685 b01103f0bafefe7d10c4464210550b8f 374 SUPERFAMILY SSF56014 265 354 2.62E-11 T 22-04-2016 VCLMA_RS03685 b01103f0bafefe7d10c4464210550b8f 374 PANTHER PTHR30454 1 368 2.8E-224 T 22-04-2016 VCLMA_RS03685 b01103f0bafefe7d10c4464210550b8f 374 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.814 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VCLMA_RS03685 b01103f0bafefe7d10c4464210550b8f 374 SUPERFAMILY SSF51717 15 208 3.53E-10 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VCLMA_RS03685 b01103f0bafefe7d10c4464210550b8f 374 Pfam PF04551 GcpE protein 14 354 2.7E-131 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VCLMA_RS03685 b01103f0bafefe7d10c4464210550b8f 374 PIRSF PIRSF004640 1 364 5.1E-146 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VCLMA_RS03685 b01103f0bafefe7d10c4464210550b8f 374 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 8.9E-125 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 VCLMA_RS10940 3b8510fb3067bbe1d2b75a59f03b8bc6 125 PIRSF PIRSF000378 2 125 1.1E-53 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VCLMA_RS10940 3b8510fb3067bbe1d2b75a59f03b8bc6 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VCLMA_RS10940 3b8510fb3067bbe1d2b75a59f03b8bc6 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 6.4E-68 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VCLMA_RS10940 3b8510fb3067bbe1d2b75a59f03b8bc6 125 Gene3D G3DSA:3.20.70.20 60 124 3.7E-33 T 22-04-2016 VCLMA_RS10940 3b8510fb3067bbe1d2b75a59f03b8bc6 125 PANTHER PTHR30191:SF5 1 125 9.4E-96 T 22-04-2016 VCLMA_RS10940 3b8510fb3067bbe1d2b75a59f03b8bc6 125 SUPERFAMILY SSF51998 64 124 2.43E-23 T 22-04-2016 VCLMA_RS10940 3b8510fb3067bbe1d2b75a59f03b8bc6 125 Pfam PF01228 Glycine radical 15 106 1.5E-23 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 VCLMA_RS10940 3b8510fb3067bbe1d2b75a59f03b8bc6 125 PANTHER PTHR30191 1 125 9.4E-96 T 22-04-2016 VCLMA_RS10940 3b8510fb3067bbe1d2b75a59f03b8bc6 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 40.679 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 PANTHER PTHR10285:SF7 269 307 3.3E-162 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 PANTHER PTHR10285:SF7 1 253 3.3E-162 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 Gene3D G3DSA:3.40.50.300 2 307 7.0E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 239 1.1E-13 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 PIRSF PIRSF000545 1 307 1.0E-145 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 SUPERFAMILY SSF52540 2 307 1.23E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 181.579 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 PANTHER PTHR10285 269 307 3.3E-162 T 22-04-2016 VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 PANTHER PTHR10285 1 253 3.3E-162 T 22-04-2016 VCLMA_RS01550 a87c99a01388662d9f027caec3a209f1 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 307 1.2E-145 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 VCLMA_RS11015 7790305f31b88a8b3f6213b51f261e28 121 Pfam PF07386 Protein of unknown function (DUF1499) 7 112 4.6E-23 T 22-04-2016 IPR010865 Protein of unknown function DUF1499 VCLMA_RS11015 7790305f31b88a8b3f6213b51f261e28 121 PIRSF PIRSF026426 1 119 5.3E-44 T 22-04-2016 IPR010865 Protein of unknown function DUF1499 VCLMA_RS11015 7790305f31b88a8b3f6213b51f261e28 121 PANTHER PTHR34801 1 121 7.6E-43 T 22-04-2016 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 Gene3D G3DSA:3.30.460.10 178 324 1.3E-45 T 22-04-2016 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 Gene3D G3DSA:3.10.20.30 388 448 8.1E-20 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 Pfam PF02824 TGS domain 389 447 1.7E-19 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 Pfam PF13291 ACT domain 626 702 4.2E-16 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 SMART SM00954 235 345 6.9E-57 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 Pfam PF13328 HD domain 28 175 4.1E-53 T 22-04-2016 IPR003607 HD/PDEase domain VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 PANTHER PTHR21262:SF0 3 705 0.0 T 22-04-2016 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 Gene3D G3DSA:3.30.70.260 630 695 5.5E-10 T 22-04-2016 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 SUPERFAMILY SSF109604 3 190 1.82E-74 T 22-04-2016 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.1E-34 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 SUPERFAMILY SSF81271 376 448 1.05E-20 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 3.4E-271 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 SMART SM00471 41 153 3.7E-11 T 22-04-2016 IPR003607 HD/PDEase domain VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 SUPERFAMILY SSF55021 630 702 1.83E-8 T 22-04-2016 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 SUPERFAMILY SSF81301 180 393 4.58E-59 T 22-04-2016 VCLMA_RS12620 145528de7c62dbf47f0a4009deffc2a6 705 PANTHER PTHR21262 3 705 0.0 T 22-04-2016 VCLMA_RS00525 af247808e234b3cc98fdc45ccae6ffd3 255 Gene3D G3DSA:3.20.20.140 1 254 5.4E-79 T 22-04-2016 VCLMA_RS00525 af247808e234b3cc98fdc45ccae6ffd3 255 Pfam PF01026 TatD related DNase 2 251 2.3E-65 T 22-04-2016 IPR001130 TatD family GO:0016788 VCLMA_RS00525 af247808e234b3cc98fdc45ccae6ffd3 255 SUPERFAMILY SSF51556 1 254 7.21E-80 T 22-04-2016 IPR032466 Metal-dependent hydrolase VCLMA_RS00525 af247808e234b3cc98fdc45ccae6ffd3 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 4.1E-69 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 VCLMA_RS00525 af247808e234b3cc98fdc45ccae6ffd3 255 PIRSF PIRSF005902 1 255 1.1E-70 T 22-04-2016 IPR001130 TatD family GO:0016788 VCLMA_RS00525 af247808e234b3cc98fdc45ccae6ffd3 255 PANTHER PTHR10060 1 255 1.0E-190 T 22-04-2016 IPR001130 TatD family GO:0016788 VCLMA_RS00525 af247808e234b3cc98fdc45ccae6ffd3 255 PANTHER PTHR10060:SF21 1 255 1.0E-190 T 22-04-2016 VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 PANTHER PTHR30371 5 250 7.2E-112 T 22-04-2016 VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 241 18.256 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 1.7E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 1.7E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 1.7E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 1.7E-51 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 4.5E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 PANTHER PTHR30371:SF0 5 250 7.2E-112 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VCLMA_RS00455 91c35441dce8db9d18cc868b231f902d 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 2.4E-75 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VCLMA_RS04740 eccf0f907a9abfbe70b7d84c557c7041 230 Pfam PF02508 Rnf-Nqr subunit, membrane protein 7 200 5.5E-65 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VCLMA_RS04740 eccf0f907a9abfbe70b7d84c557c7041 230 PANTHER PTHR30586 1 220 2.4E-144 T 22-04-2016 VCLMA_RS04740 eccf0f907a9abfbe70b7d84c557c7041 230 PIRSF PIRSF006102 1 220 2.5E-77 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 VCLMA_RS04740 eccf0f907a9abfbe70b7d84c557c7041 230 PANTHER PTHR30586:SF0 1 220 2.4E-144 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VCLMA_RS04740 eccf0f907a9abfbe70b7d84c557c7041 230 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 28.15 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VCLMA_RS04740 eccf0f907a9abfbe70b7d84c557c7041 230 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 3.7E-90 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 VCLMA_RS02445 c3442e8b9bbae3d3e40737d52ce9fbe5 231 Pfam PF04402 Protein of unknown function (DUF541) 28 227 7.0E-39 T 22-04-2016 IPR007497 Protein of unknown function DUF541 VCLMA_RS02445 c3442e8b9bbae3d3e40737d52ce9fbe5 231 PANTHER PTHR34387:SF1 1 231 2.8E-63 T 22-04-2016 VCLMA_RS02445 c3442e8b9bbae3d3e40737d52ce9fbe5 231 PANTHER PTHR34387 1 231 2.8E-63 T 22-04-2016 VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 Pfam PF00270 DEAD/DEAH box helicase 27 195 1.1E-45 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 Gene3D G3DSA:3.40.50.300 214 371 4.8E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 PANTHER PTHR24031 2 419 1.7E-211 T 22-04-2016 VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 SMART SM00490 260 341 2.8E-32 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 Gene3D G3DSA:3.40.50.300 2 213 1.3E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 PANTHER PTHR24031:SF334 2 419 1.7E-211 T 22-04-2016 VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 Pfam PF00271 Helicase conserved C-terminal domain 234 341 3.5E-31 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 SUPERFAMILY SSF52540 34 352 2.84E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 420 51.411 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VCLMA_RS03225 c306c0db74f3c03d73eb9c05489ecedf 423 SMART SM00487 22 222 4.4E-56 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS08435 434f11558ff88a4552bbf88245717805 135 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 123 4.4E-39 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VCLMA_RS08435 434f11558ff88a4552bbf88245717805 135 Gene3D G3DSA:3.10.129.10 2 125 1.2E-51 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS08435 434f11558ff88a4552bbf88245717805 135 PANTHER PTHR31793:SF9 2 130 1.8E-54 T 22-04-2016 VCLMA_RS08435 434f11558ff88a4552bbf88245717805 135 PANTHER PTHR31793 2 130 1.8E-54 T 22-04-2016 VCLMA_RS08435 434f11558ff88a4552bbf88245717805 135 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 4 126 5.6E-53 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- VCLMA_RS08435 434f11558ff88a4552bbf88245717805 135 SUPERFAMILY SSF54637 3 126 1.03E-41 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS08435 434f11558ff88a4552bbf88245717805 135 Pfam PF03061 Thioesterase superfamily 18 101 1.5E-20 T 22-04-2016 IPR006683 Thioesterase domain VCLMA_RS08435 434f11558ff88a4552bbf88245717805 135 PIRSF PIRSF003230 1 133 6.6E-48 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VCLMA_RS11280 1774d611a23c13c655c774b99d3abfbf 438 Pfam PF02321 Outer membrane efflux protein 231 419 3.0E-33 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VCLMA_RS11280 1774d611a23c13c655c774b99d3abfbf 438 Pfam PF02321 Outer membrane efflux protein 25 207 3.2E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VCLMA_RS11280 1774d611a23c13c655c774b99d3abfbf 438 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 433 1.0E-108 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VCLMA_RS11280 1774d611a23c13c655c774b99d3abfbf 438 PANTHER PTHR30026:SF3 1 436 4.9E-149 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 VCLMA_RS11280 1774d611a23c13c655c774b99d3abfbf 438 Gene3D G3DSA:1.20.1600.10 22 426 3.4E-81 T 22-04-2016 VCLMA_RS11280 1774d611a23c13c655c774b99d3abfbf 438 PANTHER PTHR30026 1 436 4.9E-149 T 22-04-2016 VCLMA_RS11280 1774d611a23c13c655c774b99d3abfbf 438 SUPERFAMILY SSF56954 1 425 7.72E-91 T 22-04-2016 VCLMA_RS12165 df9112bf46581bcbc2d26ba5d9fd6709 69 PIRSF PIRSF006169 1 68 3.6E-35 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VCLMA_RS12165 df9112bf46581bcbc2d26ba5d9fd6709 69 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 55 2.0E-24 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VCLMA_RS12165 df9112bf46581bcbc2d26ba5d9fd6709 69 Gene3D G3DSA:1.10.10.610 1 65 9.6E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VCLMA_RS12165 df9112bf46581bcbc2d26ba5d9fd6709 69 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 65 2.1E-34 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VCLMA_RS12165 df9112bf46581bcbc2d26ba5d9fd6709 69 SUPERFAMILY SSF118001 1 65 2.09E-28 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 VCLMA_RS09360 34910325f7fa64db50d6955074b7a168 212 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 204 2.3E-67 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VCLMA_RS09360 34910325f7fa64db50d6955074b7a168 212 Pfam PF01914 MarC family integral membrane protein 8 208 1.1E-65 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VCLMA_RS09360 34910325f7fa64db50d6955074b7a168 212 PANTHER PTHR33508 2 211 7.4E-94 T 22-04-2016 VCLMA_RS09360 34910325f7fa64db50d6955074b7a168 212 PANTHER PTHR33508:SF1 2 211 7.4E-94 T 22-04-2016 VCLMA_RS10365 50928c322e2d6b954ffefae3857533d2 247 SUPERFAMILY SSF53098 10 190 1.8E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS10365 50928c322e2d6b954ffefae3857533d2 247 PANTHER PTHR30231 11 246 2.7E-126 T 22-04-2016 VCLMA_RS10365 50928c322e2d6b954ffefae3857533d2 247 Pfam PF00929 Exonuclease 13 180 4.6E-40 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS10365 50928c322e2d6b954ffefae3857533d2 247 SMART SM00479 11 189 4.3E-52 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS10365 50928c322e2d6b954ffefae3857533d2 247 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 6.0E-107 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS10365 50928c322e2d6b954ffefae3857533d2 247 Gene3D G3DSA:3.30.420.10 6 191 5.4E-66 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS10365 50928c322e2d6b954ffefae3857533d2 247 PANTHER PTHR30231:SF0 11 246 2.7E-126 T 22-04-2016 VCLMA_RS10365 50928c322e2d6b954ffefae3857533d2 247 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 230 1.5E-82 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PANTHER PTHR24567:SF27 1 207 3.9E-154 T 22-04-2016 VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Gene3D G3DSA:1.10.10.10 144 207 1.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SMART SM00100 2 122 1.5E-26 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 2.7E-23 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SUPERFAMILY SSF51206 8 137 6.42E-35 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PANTHER PTHR24567 1 207 3.9E-154 T 22-04-2016 VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SMART SM00419 160 208 4.2E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.68E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.68E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.6E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 Gene3D G3DSA:2.60.120.10 6 143 6.0E-44 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS12175 0b7d81fec9fe22fd9ccc9352d89bc4f8 210 SUPERFAMILY SSF46785 139 207 2.69E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.398 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 8.1E-31 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PANTHER PTHR10772 1 96 2.3E-41 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 Gene3D G3DSA:2.30.33.40 1 96 1.7E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 SUPERFAMILY SSF50129 1 96 2.24E-31 T 22-04-2016 IPR011032 GroES-like VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 3 18 3.0E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 25 46 3.0E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 60 72 3.0E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 PRINTS PR00297 10kDa chaperonin signature 82 95 3.0E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VCLMA_RS12405 b97c6e7abfdbf5cdcbe73ad6abecee77 96 SMART SM00883 2 95 2.9E-49 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VCLMA_RS06285 beabe49bc1fcb6d0b3077c87f1c32dd1 265 Gene3D G3DSA:1.10.3670.10 28 139 1.2E-38 T 22-04-2016 VCLMA_RS06285 beabe49bc1fcb6d0b3077c87f1c32dd1 265 Gene3D G3DSA:2.30.260.10 140 264 2.0E-36 T 22-04-2016 IPR023360 Putative xylanase-like C-terminal VCLMA_RS06285 beabe49bc1fcb6d0b3077c87f1c32dd1 265 Pfam PF07313 Protein of unknown function (DUF1460) 60 257 5.3E-75 T 22-04-2016 IPR010846 Protein of unknown function DUF1460 VCLMA_RS06285 beabe49bc1fcb6d0b3077c87f1c32dd1 265 SUPERFAMILY SSF54001 38 264 2.75E-73 T 22-04-2016 VCLMA_RS04135 a1b8cf656df97fd90d51e4d5204d9efc 179 Pfam PF13302 Acetyltransferase (GNAT) domain 9 141 6.2E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS04135 a1b8cf656df97fd90d51e4d5204d9efc 179 SUPERFAMILY SSF55729 2 143 1.29E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS04135 a1b8cf656df97fd90d51e4d5204d9efc 179 PANTHER PTHR13256:SF10 1 143 4.7E-36 T 22-04-2016 VCLMA_RS04135 a1b8cf656df97fd90d51e4d5204d9efc 179 PANTHER PTHR13256 1 143 4.7E-36 T 22-04-2016 VCLMA_RS04135 a1b8cf656df97fd90d51e4d5204d9efc 179 Gene3D G3DSA:3.40.630.30 2 151 5.3E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS04370 3b75f4d39ec017974c71788c8858ed15 174 Gene3D G3DSA:3.30.1950.10 29 95 4.8E-21 T 22-04-2016 VCLMA_RS04370 3b75f4d39ec017974c71788c8858ed15 174 PANTHER PTHR33619 1 166 7.8E-58 T 22-04-2016 VCLMA_RS04370 3b75f4d39ec017974c71788c8858ed15 174 Pfam PF02563 Polysaccharide biosynthesis/export protein 21 95 3.1E-21 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VCLMA_RS04370 3b75f4d39ec017974c71788c8858ed15 174 PANTHER PTHR33619:SF2 1 166 7.8E-58 T 22-04-2016 VCLMA_RS04370 3b75f4d39ec017974c71788c8858ed15 174 Pfam PF10531 SLBB domain 101 142 1.1E-9 T 22-04-2016 IPR019554 Soluble ligand binding domain VCLMA_RS04370 3b75f4d39ec017974c71788c8858ed15 174 Gene3D G3DSA:3.10.560.10 96 169 1.5E-10 T 22-04-2016 VCLMA_RS03585 8085acf7ba7657a3f3c08bc462245192 351 Pfam PF02547 Queuosine biosynthesis protein 3 344 8.7E-133 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS03585 8085acf7ba7657a3f3c08bc462245192 351 Gene3D G3DSA:2.40.10.240 64 142 1.7E-17 T 22-04-2016 VCLMA_RS03585 8085acf7ba7657a3f3c08bc462245192 351 PANTHER PTHR30307:SF0 2 351 3.7E-183 T 22-04-2016 VCLMA_RS03585 8085acf7ba7657a3f3c08bc462245192 351 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 345 47.383 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS03585 8085acf7ba7657a3f3c08bc462245192 351 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 2.1E-158 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS03585 8085acf7ba7657a3f3c08bc462245192 351 PANTHER PTHR30307 2 351 3.7E-183 T 22-04-2016 VCLMA_RS03585 8085acf7ba7657a3f3c08bc462245192 351 SUPERFAMILY SSF111337 1 344 3.53E-138 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 VCLMA_RS03585 8085acf7ba7657a3f3c08bc462245192 351 Gene3D G3DSA:3.40.1780.10 179 344 2.6E-100 T 22-04-2016 VCLMA_RS03585 8085acf7ba7657a3f3c08bc462245192 351 Gene3D G3DSA:3.40.1780.10 1 62 2.6E-100 T 22-04-2016 VCLMA_RS10230 66cb26ffc3e3426f23a54c68e10db96c 107 Pfam PF04316 Anti-sigma-28 factor, FlgM 45 98 1.5E-17 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VCLMA_RS10230 66cb26ffc3e3426f23a54c68e10db96c 107 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 102 2.3E-24 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VCLMA_RS10230 66cb26ffc3e3426f23a54c68e10db96c 107 SUPERFAMILY SSF101498 3 101 2.62E-20 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VCLMA_RS05230 96c23eecdfe09eb141bbde5ec95e08fb 384 Pfam PF00155 Aminotransferase class I and II 43 375 2.0E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VCLMA_RS05230 96c23eecdfe09eb141bbde5ec95e08fb 384 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 377 6.4E-145 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VCLMA_RS05230 96c23eecdfe09eb141bbde5ec95e08fb 384 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 232 241 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 VCLMA_RS05230 96c23eecdfe09eb141bbde5ec95e08fb 384 Gene3D G3DSA:3.90.1150.10 269 383 1.0E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS05230 96c23eecdfe09eb141bbde5ec95e08fb 384 PANTHER PTHR13693:SF53 1 382 9.3E-179 T 22-04-2016 VCLMA_RS05230 96c23eecdfe09eb141bbde5ec95e08fb 384 Gene3D G3DSA:3.40.640.10 60 268 2.3E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS05230 96c23eecdfe09eb141bbde5ec95e08fb 384 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 380 47.55 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 VCLMA_RS05230 96c23eecdfe09eb141bbde5ec95e08fb 384 PANTHER PTHR13693 1 382 9.3E-179 T 22-04-2016 VCLMA_RS05230 96c23eecdfe09eb141bbde5ec95e08fb 384 SUPERFAMILY SSF53383 5 378 3.99E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PRINTS PR00985 Leucyl-tRNA synthetase signature 338 356 5.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PRINTS PR00985 Leucyl-tRNA synthetase signature 409 419 5.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PRINTS PR00985 Leucyl-tRNA synthetase signature 38 51 5.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PRINTS PR00985 Leucyl-tRNA synthetase signature 6 22 5.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PRINTS PR00985 Leucyl-tRNA synthetase signature 68 87 5.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PRINTS PR00985 Leucyl-tRNA synthetase signature 376 398 5.2E-45 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 74 257 8.5E-80 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PANTHER PTHR11946 1 59 3.2E-269 T 22-04-2016 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PANTHER PTHR11946 93 423 3.2E-269 T 22-04-2016 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PANTHER PTHR11946 466 678 3.2E-269 T 22-04-2016 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 SUPERFAMILY SSF52374 269 520 3.49E-86 T 22-04-2016 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 SUPERFAMILY SSF52374 1 79 3.49E-86 T 22-04-2016 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 Pfam PF08264 Anticodon-binding domain of tRNA 553 672 1.8E-15 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 Gene3D G3DSA:3.90.740.10 76 277 1.1E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 Gene3D G3DSA:3.40.50.620 278 425 7.8E-92 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 Gene3D G3DSA:3.40.50.620 470 499 7.8E-92 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 Gene3D G3DSA:3.40.50.620 1 75 7.8E-92 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 Gene3D G3DSA:1.10.730.10 500 646 1.7E-46 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PANTHER PTHR11946:SF7 1 59 3.2E-269 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PANTHER PTHR11946:SF7 93 423 3.2E-269 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 PANTHER PTHR11946:SF7 466 678 3.2E-269 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 471 503 1.1E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 271 424 5.4E-9 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 1 677 7.5E-282 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 SUPERFAMILY SSF47323 521 648 8.41E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 VCLMA_RS17290 250f3d90dc6699978b2893d2da3b1311 678 SUPERFAMILY SSF50677 79 268 9.31E-60 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 VCLMA_RS04410 1066bcb907a36a76e3b2d2c01e3b2a32 216 Hamap MF_00013 Octanoyltransferase [lipB]. 4 204 37.933 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VCLMA_RS04410 1066bcb907a36a76e3b2d2c01e3b2a32 216 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 201 6.9E-71 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VCLMA_RS04410 1066bcb907a36a76e3b2d2c01e3b2a32 216 SUPERFAMILY SSF55681 3 203 4.72E-70 T 22-04-2016 VCLMA_RS04410 1066bcb907a36a76e3b2d2c01e3b2a32 216 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 9.4E-9 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 VCLMA_RS04410 1066bcb907a36a76e3b2d2c01e3b2a32 216 PIRSF PIRSF016262 1 215 2.6E-62 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VCLMA_RS04410 1066bcb907a36a76e3b2d2c01e3b2a32 216 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 VCLMA_RS04410 1066bcb907a36a76e3b2d2c01e3b2a32 216 Gene3D G3DSA:3.90.1550.10 2 200 1.7E-72 T 22-04-2016 VCLMA_RS04410 1066bcb907a36a76e3b2d2c01e3b2a32 216 PANTHER PTHR10993 1 208 7.2E-77 T 22-04-2016 VCLMA_RS04410 1066bcb907a36a76e3b2d2c01e3b2a32 216 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 2.0E-24 T 22-04-2016 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 PANTHER PTHR11136:SF0 8 421 2.0E-129 T 22-04-2016 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 PIRSF PIRSF001563 7 420 8.5E-107 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 SUPERFAMILY SSF53623 15 286 1.44E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 Gene3D G3DSA:3.90.190.20 289 418 7.9E-45 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 SUPERFAMILY SSF53244 288 417 2.9E-32 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 Gene3D G3DSA:3.40.1190.10 13 287 5.3E-88 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 PANTHER PTHR11136 8 421 2.0E-129 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 339 3.1E-8 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 Pfam PF08245 Mur ligase middle domain 54 196 6.3E-8 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS04685 a9fda0ab60b752fff6146a83e91b064d 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 415 1.1E-107 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 VCLMA_RS12500 8dda4ca0fcdd7590b80673761211c313 295 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 24 289 2.7E-103 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VCLMA_RS12500 8dda4ca0fcdd7590b80673761211c313 295 Gene3D G3DSA:3.20.20.220 10 293 1.7E-105 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like VCLMA_RS12500 8dda4ca0fcdd7590b80673761211c313 295 Pfam PF02219 Methylenetetrahydrofolate reductase 16 290 1.8E-100 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 VCLMA_RS12500 8dda4ca0fcdd7590b80673761211c313 295 SUPERFAMILY SSF51730 21 293 4.32E-95 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like VCLMA_RS12500 8dda4ca0fcdd7590b80673761211c313 295 PANTHER PTHR21091 148 279 4.6E-42 T 22-04-2016 VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 Gene3D G3DSA:3.40.30.10 486 597 5.3E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 ProSitePatterns PS00194 Thioredoxin family active site. 507 525 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 207 407 8.6E-17 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 Gene3D G3DSA:2.60.40.1250 35 153 3.7E-42 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 Pfam PF11412 Disulphide bond corrector protein DsbC 40 152 3.0E-30 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 599 39.716 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 SUPERFAMILY SSF52833 485 596 3.34E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 SUPERFAMILY SSF74863 39 152 2.62E-40 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 Pfam PF13899 Thioredoxin-like 488 552 5.7E-14 T 22-04-2016 VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 PANTHER PTHR32234 197 598 1.2E-246 T 22-04-2016 VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 PANTHER PTHR32234 5 181 1.2E-246 T 22-04-2016 VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 PANTHER PTHR32234:SF0 197 598 1.2E-246 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VCLMA_RS12580 7eece44361eff8269d5d0294e9f2052c 600 PANTHER PTHR32234:SF0 5 181 1.2E-246 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VCLMA_RS12770 937a740892a0e84b488225c466203028 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.25 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VCLMA_RS12770 937a740892a0e84b488225c466203028 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 6.2E-50 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VCLMA_RS12770 937a740892a0e84b488225c466203028 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 143 4.7E-62 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VCLMA_RS12770 937a740892a0e84b488225c466203028 144 PANTHER PTHR10472 2 143 7.0E-68 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 VCLMA_RS12770 937a740892a0e84b488225c466203028 144 SUPERFAMILY SSF69500 2 143 6.8E-53 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VCLMA_RS12770 937a740892a0e84b488225c466203028 144 Gene3D G3DSA:3.50.80.10 3 143 1.1E-52 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain VCLMA_RS09565 9ea66863ccde580807291d86290ec01d 142 PIRSF PIRSF000714 3 140 1.6E-51 T 22-04-2016 IPR026026 Histidine triad hydrolase, Hint-type VCLMA_RS09565 9ea66863ccde580807291d86290ec01d 142 SUPERFAMILY SSF54197 3 136 6.8E-34 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VCLMA_RS09565 9ea66863ccde580807291d86290ec01d 142 PANTHER PTHR23089 37 131 2.7E-18 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VCLMA_RS09565 9ea66863ccde580807291d86290ec01d 142 Pfam PF01230 HIT domain 11 101 2.6E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein VCLMA_RS09565 9ea66863ccde580807291d86290ec01d 142 Gene3D G3DSA:3.30.428.10 2 137 9.6E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 VCLMA_RS09565 9ea66863ccde580807291d86290ec01d 142 PANTHER PTHR23089:SF13 37 131 2.7E-18 T 22-04-2016 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 Gene3D G3DSA:3.40.120.10 311 445 4.3E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 SUPERFAMILY SSF53738 27 235 9.18E-54 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 SUPERFAMILY SSF55957 432 544 1.44E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 SUPERFAMILY SSF53738 305 447 1.24E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 535 2.7E-6 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 Gene3D G3DSA:3.40.120.10 31 225 2.1E-59 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 PANTHER PTHR22573:SF52 19 548 1.6E-285 T 22-04-2016 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 Gene3D G3DSA:3.40.120.10 226 310 1.3E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 SUPERFAMILY SSF53738 209 317 2.12E-7 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 3.5E-17 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 181 2.8E-40 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 PANTHER PTHR22573 19 548 1.6E-285 T 22-04-2016 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 Gene3D G3DSA:3.30.310.50 466 544 5.8E-30 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS09660 3c47f9288ce9b5137106c9ed3739cb3e 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 4.3E-28 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.6E-120 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 Gene3D G3DSA:2.160.10.10 209 346 5.4E-25 T 22-04-2016 VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.545 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.055 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 SUPERFAMILY SSF51161 32 316 5.41E-86 T 22-04-2016 IPR011004 Trimeric LpxA-like VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.4E-9 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 147 179 1.2E-8 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 257 5.0E-5 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 PANTHER PTHR22572 100 295 6.7E-58 T 22-04-2016 VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 2.0E-20 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 VCLMA_RS10445 bb9367a1f02af7b338a78af8877f258a 351 Gene3D G3DSA:2.160.10.10 107 208 1.1E-28 T 22-04-2016 VCLMA_RS00980 0ed6e417a880b34395b5f1f4508f9224 282 Gene3D G3DSA:1.10.10.10 1 78 3.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS00980 0ed6e417a880b34395b5f1f4508f9224 282 PANTHER PTHR30514 1 282 6.9E-134 T 22-04-2016 VCLMA_RS00980 0ed6e417a880b34395b5f1f4508f9224 282 Gene3D G3DSA:3.40.50.10490 109 271 6.7E-38 T 22-04-2016 VCLMA_RS00980 0ed6e417a880b34395b5f1f4508f9224 282 PANTHER PTHR30514:SF4 1 282 6.9E-134 T 22-04-2016 VCLMA_RS00980 0ed6e417a880b34395b5f1f4508f9224 282 Pfam PF01380 SIS domain 130 256 6.3E-19 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS00980 0ed6e417a880b34395b5f1f4508f9224 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 2.2E-21 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VCLMA_RS00980 0ed6e417a880b34395b5f1f4508f9224 282 SUPERFAMILY SSF53697 99 279 2.09E-37 T 22-04-2016 VCLMA_RS00980 0ed6e417a880b34395b5f1f4508f9224 282 SUPERFAMILY SSF46689 1 78 3.4E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 227 295 4.3E-20 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 Gene3D G3DSA:3.30.160.40 221 305 1.6E-27 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 PANTHER PTHR11557 6 307 7.8E-167 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 SUPERFAMILY SSF54782 220 309 2.35E-28 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 4.6E-114 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 Gene3D G3DSA:3.40.190.10 3 110 1.0E-48 T 22-04-2016 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 2.5E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 2.5E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 2.5E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 2.5E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 2.5E-47 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 8.0E-80 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 PIRSF PIRSF001438 1 310 2.4E-121 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 Gene3D G3DSA:3.40.190.10 111 199 2.0E-40 T 22-04-2016 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 SUPERFAMILY SSF53850 4 219 3.83E-86 T 22-04-2016 VCLMA_RS00595 2cddf41fbf4e42bd3690560af30b9777 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.718 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS11325 ba9aec2fa47d1b3bf4965e5d3b504289 529 SUPERFAMILY SSF52540 5 261 2.84E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11325 ba9aec2fa47d1b3bf4965e5d3b504289 529 Pfam PF13401 AAA domain 42 171 3.2E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS11325 ba9aec2fa47d1b3bf4965e5d3b504289 529 SUPERFAMILY SSF47090 447 521 3.66E-12 T 22-04-2016 IPR002477 Peptidoglycan binding-like VCLMA_RS11325 ba9aec2fa47d1b3bf4965e5d3b504289 529 Pfam PF01471 Putative peptidoglycan binding domain 458 514 1.4E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like VCLMA_RS11325 ba9aec2fa47d1b3bf4965e5d3b504289 529 Gene3D G3DSA:1.10.101.10 450 521 5.8E-15 T 22-04-2016 IPR002477 Peptidoglycan binding-like VCLMA_RS11325 ba9aec2fa47d1b3bf4965e5d3b504289 529 PANTHER PTHR35894:SF2 2 529 0.0 T 22-04-2016 VCLMA_RS11325 ba9aec2fa47d1b3bf4965e5d3b504289 529 PANTHER PTHR35894 2 529 0.0 T 22-04-2016 VCLMA_RS11325 ba9aec2fa47d1b3bf4965e5d3b504289 529 SMART SM00382 42 195 4.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS11325 ba9aec2fa47d1b3bf4965e5d3b504289 529 Gene3D G3DSA:3.40.50.300 27 177 2.0E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.0E-31 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 92 30.277 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.4E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.4E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.4E-18 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 2.0E-48 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PANTHER PTHR33175:SF5 1 91 9.1E-50 T 22-04-2016 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 Gene3D G3DSA:4.10.520.10 1 91 1.1E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 SUPERFAMILY SSF47729 1 91 3.68E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 PANTHER PTHR33175 1 91 9.1E-50 T 22-04-2016 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VCLMA_RS08790 7d7f2ca34a76cafdc9a001967b3b0b2e 92 SMART SM00411 1 91 9.0E-44 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS00180 10ef8d77d2386fd85ed5b4d0d864a338 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 2.2E-45 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 VCLMA_RS00180 10ef8d77d2386fd85ed5b4d0d864a338 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 2.0E-44 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 VCLMA_RS10575 ee9a5413689872a531e22f4b14002cb2 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 40.038 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 VCLMA_RS10575 ee9a5413689872a531e22f4b14002cb2 154 Pfam PF00156 Phosphoribosyl transferase domain 27 142 1.1E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VCLMA_RS10575 ee9a5413689872a531e22f4b14002cb2 154 PANTHER PTHR39563 2 152 6.9E-117 T 22-04-2016 VCLMA_RS10575 ee9a5413689872a531e22f4b14002cb2 154 SUPERFAMILY SSF53271 5 147 4.26E-30 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS10575 ee9a5413689872a531e22f4b14002cb2 154 Gene3D G3DSA:3.40.50.2020 1 147 1.6E-42 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS10020 1c874b0312a3a75fd640efd01b11067a 127 PIRSF PIRSF005610 1 121 1.1E-18 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VCLMA_RS10020 1c874b0312a3a75fd640efd01b11067a 127 PANTHER PTHR39594 1 127 1.7E-49 T 22-04-2016 VCLMA_RS10020 1c874b0312a3a75fd640efd01b11067a 127 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 123 3.5E-38 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 Gene3D G3DSA:1.10.10.10 5 51 3.4E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 PANTHER PTHR30363:SF15 3 255 4.4E-152 T 22-04-2016 VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 SUPERFAMILY SSF46785 9 66 1.09E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 Gene3D G3DSA:3.40.50.1360 79 217 1.4E-15 T 22-04-2016 VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 PANTHER PTHR30363 3 255 4.4E-152 T 22-04-2016 VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 SMART SM00420 9 61 2.1E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 SMART SM01134 73 234 1.5E-58 T 22-04-2016 VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 Pfam PF00455 DeoR C terminal sensor domain 78 233 4.7E-45 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 Pfam PF08220 DeoR-like helix-turn-helix domain 9 61 1.0E-15 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 SUPERFAMILY SSF100950 79 234 2.34E-31 T 22-04-2016 VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 8.6E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VCLMA_RS02460 f61bd788265f843a6a649e8d99a3e0c8 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 8.6E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 SUPERFAMILY SSF56042 826 1035 2.54E-56 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 SUPERFAMILY SSF109736 155 220 3.4E-21 T 22-04-2016 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 SUPERFAMILY SSF52317 1037 1296 6.98E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 836 966 6.3E-16 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 589 5.4E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 PANTHER PTHR10099:SF5 1 1297 0.0 T 22-04-2016 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 PANTHER PTHR10099 1 1297 0.0 T 22-04-2016 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 SUPERFAMILY SSF55326 619 816 8.63E-69 T 22-04-2016 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 Gene3D G3DSA:3.40.50.880 1043 1265 1.4E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1041 1296 2.3E-108 T 22-04-2016 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1297 21.391 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 SUPERFAMILY SSF56042 432 615 5.08E-53 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 SMART SM01211 1041 1296 6.1E-159 T 22-04-2016 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 SUPERFAMILY SSF55326 221 428 6.28E-65 T 22-04-2016 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 SUPERFAMILY SSF82697 1 151 2.88E-52 T 22-04-2016 VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 Gene3D G3DSA:3.30.1330.10 211 421 3.1E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 Gene3D G3DSA:3.30.1330.10 646 810 3.8E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VCLMA_RS04070 5856e4437790d7a43a7856fe7b7b3058 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1295 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 VCLMA_RS12760 21c537c71f83cca729705a11503591cd 628 Pfam PF05170 AsmA family 1 569 1.0E-177 T 22-04-2016 IPR007844 AsmA VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 300 3.3E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.2E-124 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 4.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 4.9E-76 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PANTHER PTHR22912 1 316 4.4E-170 T 22-04-2016 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 Gene3D G3DSA:3.50.50.60 120 236 2.4E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 SUPERFAMILY SSF51905 2 313 2.04E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 Gene3D G3DSA:3.50.50.60 5 119 1.4E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.4E-38 T 22-04-2016 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.4E-38 T 22-04-2016 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.4E-38 T 22-04-2016 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.4E-38 T 22-04-2016 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.4E-38 T 22-04-2016 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 PANTHER PTHR22912:SF48 1 316 4.4E-170 T 22-04-2016 VCLMA_RS05565 3eae478b2d7f2e1c74eb1049c40c7d76 318 Gene3D G3DSA:3.50.50.60 237 314 1.3E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS04265 57e438cf0d7fed9eaa8addc91a497b0b 474 Pfam PF02378 Phosphotransferase system, EIIC 112 404 1.3E-34 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VCLMA_RS04265 57e438cf0d7fed9eaa8addc91a497b0b 474 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VCLMA_RS04265 57e438cf0d7fed9eaa8addc91a497b0b 474 Pfam PF00367 phosphotransferase system, EIIB 11 43 7.4E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VCLMA_RS04265 57e438cf0d7fed9eaa8addc91a497b0b 474 SUPERFAMILY SSF55604 10 82 5.62E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS04265 57e438cf0d7fed9eaa8addc91a497b0b 474 PANTHER PTHR30175 1 462 3.5E-259 T 22-04-2016 VCLMA_RS04265 57e438cf0d7fed9eaa8addc91a497b0b 474 Gene3D G3DSA:3.30.1360.60 6 83 3.7E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS04265 57e438cf0d7fed9eaa8addc91a497b0b 474 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 461 5.9E-205 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 VCLMA_RS04265 57e438cf0d7fed9eaa8addc91a497b0b 474 PANTHER PTHR30175:SF4 1 462 3.5E-259 T 22-04-2016 VCLMA_RS04265 57e438cf0d7fed9eaa8addc91a497b0b 474 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 1.2E-14 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 Gene3D G3DSA:1.20.1560.10 2 275 2.5E-65 T 22-04-2016 VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 Pfam PF00005 ABC transporter 309 457 4.8E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 SMART SM00382 317 503 1.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 Gene3D G3DSA:3.40.50.300 290 522 3.4E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 Pfam PF00664 ABC transporter transmembrane region 2 247 9.4E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 PANTHER PTHR24221 1 536 1.1E-195 T 22-04-2016 VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 SUPERFAMILY SSF90123 2 277 8.37E-55 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 PANTHER PTHR24221:SF246 1 536 1.1E-195 T 22-04-2016 VCLMA_RS06825 01f044575c919a7ca535a98e186fc9e4 537 SUPERFAMILY SSF52540 285 527 1.54E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09340 a58eefebdd0bf286ff6e06d236e4545c 1052 SUPERFAMILY SSF50249 37 121 9.65E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS09340 a58eefebdd0bf286ff6e06d236e4545c 1052 Hamap MF_00970 Ribonuclease E [rne]. 1 1039 35.634 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VCLMA_RS09340 a58eefebdd0bf286ff6e06d236e4545c 1052 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 421 4.0E-171 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VCLMA_RS09340 a58eefebdd0bf286ff6e06d236e4545c 1052 PANTHER PTHR30001 1 836 0.0 T 22-04-2016 VCLMA_RS09340 a58eefebdd0bf286ff6e06d236e4545c 1052 Pfam PF00575 S1 RNA binding domain 34 115 4.6E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 VCLMA_RS09340 a58eefebdd0bf286ff6e06d236e4545c 1052 SMART SM00316 34 116 3.9E-11 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS09340 a58eefebdd0bf286ff6e06d236e4545c 1052 PANTHER PTHR30001:SF1 1 836 0.0 T 22-04-2016 VCLMA_RS09340 a58eefebdd0bf286ff6e06d236e4545c 1052 Gene3D G3DSA:2.40.50.140 28 121 5.3E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS09340 a58eefebdd0bf286ff6e06d236e4545c 1052 Pfam PF10150 Ribonuclease E/G family 118 387 1.3E-94 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VCLMA_RS06595 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 SMART SM00448 2 115 1.5E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06595 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 Gene3D G3DSA:3.40.50.2300 1 119 3.0E-37 T 22-04-2016 VCLMA_RS06595 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06595 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 SUPERFAMILY SSF52172 1 120 2.13E-35 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS06595 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 PANTHER PTHR26402 2 119 2.5E-38 T 22-04-2016 VCLMA_RS06595 9f92abb4dd93bc2b4fbc7e8b62c2ead0 123 PANTHER PTHR26402:SF527 2 119 2.5E-38 T 22-04-2016 VCLMA_RS07525 1e1067d5ac6fb6266d14ead61745cfbc 405 Pfam PF07690 Major Facilitator Superfamily 16 352 2.4E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS07525 1e1067d5ac6fb6266d14ead61745cfbc 405 SUPERFAMILY SSF103473 6 393 4.05E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS07525 1e1067d5ac6fb6266d14ead61745cfbc 405 Gene3D G3DSA:1.20.1250.20 212 393 7.0E-11 T 22-04-2016 VCLMA_RS07525 1e1067d5ac6fb6266d14ead61745cfbc 405 Gene3D G3DSA:1.20.1250.20 13 192 6.9E-27 T 22-04-2016 VCLMA_RS07525 1e1067d5ac6fb6266d14ead61745cfbc 405 PANTHER PTHR23501:SF11 1 399 4.1E-186 T 22-04-2016 VCLMA_RS07525 1e1067d5ac6fb6266d14ead61745cfbc 405 PANTHER PTHR23501 1 399 4.1E-186 T 22-04-2016 VCLMA_RS09895 4996943435d18aaf8a8fd39a595e9b1d 302 Pfam PF04261 Dyp-type peroxidase family 5 293 1.9E-95 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VCLMA_RS09895 4996943435d18aaf8a8fd39a595e9b1d 302 SUPERFAMILY SSF54909 2 297 1.75E-97 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VCLMA_RS09895 4996943435d18aaf8a8fd39a595e9b1d 302 PANTHER PTHR30521 17 297 2.1E-125 T 22-04-2016 VCLMA_RS09895 4996943435d18aaf8a8fd39a595e9b1d 302 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 1.0E-89 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- VCLMA_RS09895 4996943435d18aaf8a8fd39a595e9b1d 302 PANTHER PTHR30521:SF0 17 297 2.1E-125 T 22-04-2016 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 PANTHER PTHR10174 200 367 2.2E-157 T 22-04-2016 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 PANTHER PTHR10174 102 178 2.2E-157 T 22-04-2016 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 353 1.2E-57 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 Gene3D G3DSA:3.30.360.10 142 350 1.4E-76 T 22-04-2016 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 PIRSF PIRSF000148 1 370 1.0E-65 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 SUPERFAMILY SSF55347 133 354 9.17E-79 T 22-04-2016 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 SMART SM00859 2 121 2.8E-20 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 118 3.4E-22 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 31.892 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 SUPERFAMILY SSF51735 1 146 1.36E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 PANTHER PTHR10174:SF116 200 367 2.2E-157 T 22-04-2016 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 PANTHER PTHR10174:SF116 102 178 2.2E-157 T 22-04-2016 VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 Gene3D G3DSA:3.40.50.720 1 141 2.5E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09365 0ce812190368186aa3b6658b6f82a863 370 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 1 366 3.3E-189 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 VCLMA_RS10260 409c70e88609e5beb6d657ce28a26c3c 271 SUPERFAMILY SSF63380 10 128 3.97E-8 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VCLMA_RS10260 409c70e88609e5beb6d657ce28a26c3c 271 Gene3D G3DSA:3.40.50.80 132 269 6.4E-42 T 22-04-2016 VCLMA_RS10260 409c70e88609e5beb6d657ce28a26c3c 271 PANTHER PTHR30157:SF1 6 263 2.0E-123 T 22-04-2016 VCLMA_RS10260 409c70e88609e5beb6d657ce28a26c3c 271 PANTHER PTHR30157 6 263 2.0E-123 T 22-04-2016 VCLMA_RS10260 409c70e88609e5beb6d657ce28a26c3c 271 Pfam PF04954 Siderophore-interacting protein 134 253 1.6E-34 T 22-04-2016 IPR007037 Siderophore-interacting protein VCLMA_RS10260 409c70e88609e5beb6d657ce28a26c3c 271 Pfam PF08021 Siderophore-interacting FAD-binding domain 16 127 1.4E-33 T 22-04-2016 IPR013113 FAD-binding 9, siderophore-interacting VCLMA_RS10260 409c70e88609e5beb6d657ce28a26c3c 271 Gene3D G3DSA:2.40.30.10 8 126 2.1E-29 T 22-04-2016 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 PANTHER PTHR10169 1 526 0.0 T 22-04-2016 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 22-04-2016 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 2.9E-136 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 SMART SM00434 13 463 4.8E-235 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 SUPERFAMILY SSF56719 33 485 9.68E-156 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 Gene3D G3DSA:3.30.1360.40 240 333 6.0E-25 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 691 1.1E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 640 8.4E-4 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 Gene3D G3DSA:3.90.199.10 32 239 1.1E-106 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 Gene3D G3DSA:3.90.199.10 335 400 1.1E-106 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 PANTHER PTHR10169:SF30 1 526 0.0 T 22-04-2016 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 Gene3D G3DSA:2.120.10.90 498 738 2.3E-29 T 22-04-2016 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.896 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VCLMA_RS11250 c2a2ef29e15c99a05d8f3a1760585929 761 SUPERFAMILY SSF101904 499 743 8.76E-53 T 22-04-2016 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 SUPERFAMILY SSF55816 366 542 3.4E-52 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 Gene3D G3DSA:3.90.780.10 367 541 1.4E-52 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 SUPERFAMILY SSF56300 31 363 5.58E-101 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 511 1.3E-33 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 PANTHER PTHR11575 1 552 2.8E-259 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 1.4E-21 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 242 265 2.2E-54 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 487 506 2.2E-54 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 287 307 2.2E-54 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 420 443 2.2E-54 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 211 228 2.2E-54 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 PRINTS PR01607 Apyrase family signature 36 54 2.2E-54 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 Gene3D G3DSA:3.60.21.10 32 363 5.6E-103 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS10005 b6fd63c827979ddb9695df8932d33c37 553 PANTHER PTHR11575:SF27 1 552 2.8E-259 T 22-04-2016 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 SUPERFAMILY SSF51395 2 361 7.33E-110 T 22-04-2016 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 Gene3D G3DSA:3.50.50.60 475 619 2.1E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 Gene3D G3DSA:3.50.50.60 359 461 4.6E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 SUPERFAMILY SSF51905 371 600 1.42E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 Gene3D G3DSA:3.20.20.70 1 358 1.1E-121 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 PANTHER PTHR22893 2 415 2.3E-249 T 22-04-2016 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 PANTHER PTHR22893:SF25 2 415 2.3E-249 T 22-04-2016 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 375 394 4.9E-9 T 22-04-2016 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 496 514 4.9E-9 T 22-04-2016 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 373 627 9.1E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS09160 50e33ad5952a78f9e25c2f7c53262f3c 666 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 327 1.3E-86 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VCLMA_RS06775 54383d33fddb936c190d99de7497de8d 158 Pfam PF05751 FixH 7 147 5.4E-43 T 22-04-2016 IPR008620 Nitrogen fixation protein FixH VCLMA_RS03410 6fbcec7ee4518759648d516df6d99704 161 Gene3D G3DSA:3.90.950.10 1 158 3.6E-59 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VCLMA_RS03410 6fbcec7ee4518759648d516df6d99704 161 Pfam PF01931 Protein of unknown function DUF84 1 153 1.6E-54 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VCLMA_RS03410 6fbcec7ee4518759648d516df6d99704 161 PANTHER PTHR34699 1 161 2.1E-104 T 22-04-2016 VCLMA_RS03410 6fbcec7ee4518759648d516df6d99704 161 PANTHER PTHR34699:SF3 1 161 2.1E-104 T 22-04-2016 VCLMA_RS03410 6fbcec7ee4518759648d516df6d99704 161 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 1 158 1.5E-43 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase VCLMA_RS03410 6fbcec7ee4518759648d516df6d99704 161 SUPERFAMILY SSF52972 1 158 1.0E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VCLMA_RS03775 f95c45fe5cabce8af5fafa5f7dbb3a15 350 Gene3D G3DSA:1.10.3470.10 22 346 2.8E-91 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS03775 f95c45fe5cabce8af5fafa5f7dbb3a15 350 PANTHER PTHR30472:SF31 11 350 1.3E-186 T 22-04-2016 VCLMA_RS03775 f95c45fe5cabce8af5fafa5f7dbb3a15 350 SUPERFAMILY SSF81345 22 344 2.35E-73 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS03775 f95c45fe5cabce8af5fafa5f7dbb3a15 350 Pfam PF01032 FecCD transport family 34 344 7.8E-87 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS03775 f95c45fe5cabce8af5fafa5f7dbb3a15 350 PANTHER PTHR30472 11 350 1.3E-186 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS02000 09f3c744723396849ea50bb51be271e6 214 SUPERFAMILY SSF46894 140 211 7.82E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS02000 09f3c744723396849ea50bb51be271e6 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 208 1.9E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS02000 09f3c744723396849ea50bb51be271e6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 5.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS02000 09f3c744723396849ea50bb51be271e6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 5.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS02000 09f3c744723396849ea50bb51be271e6 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 5.4E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS02000 09f3c744723396849ea50bb51be271e6 214 SMART SM00421 152 209 7.8E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS02000 09f3c744723396849ea50bb51be271e6 214 PANTHER PTHR26402 114 208 1.0E-16 T 22-04-2016 VCLMA_RS02000 09f3c744723396849ea50bb51be271e6 214 Gene3D G3DSA:1.10.10.10 149 212 5.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02000 09f3c744723396849ea50bb51be271e6 214 PANTHER PTHR26402:SF151 114 208 1.0E-16 T 22-04-2016 VCLMA_RS01180 2e464cedfa6388ea2ebef916b6f0dead 460 Pfam PF00534 Glycosyl transferases group 1 278 431 2.2E-6 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VCLMA_RS01180 2e464cedfa6388ea2ebef916b6f0dead 460 SUPERFAMILY SSF53756 268 454 5.83E-21 T 22-04-2016 VCLMA_RS01180 2e464cedfa6388ea2ebef916b6f0dead 460 SUPERFAMILY SSF53756 100 239 5.83E-21 T 22-04-2016 VCLMA_RS04920 0c59874182bb8688a3ef5fd2eb3a1826 182 PANTHER PTHR23026:SF107 1 175 1.6E-92 T 22-04-2016 VCLMA_RS04920 0c59874182bb8688a3ef5fd2eb3a1826 182 PANTHER PTHR23026 1 175 1.6E-92 T 22-04-2016 VCLMA_RS04920 0c59874182bb8688a3ef5fd2eb3a1826 182 SUPERFAMILY SSF55469 1 181 1.01E-41 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 VCLMA_RS04920 0c59874182bb8688a3ef5fd2eb3a1826 182 Gene3D G3DSA:3.40.109.10 1 181 8.0E-42 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 VCLMA_RS04920 0c59874182bb8688a3ef5fd2eb3a1826 182 Pfam PF00881 Nitroreductase family 8 161 1.0E-25 T 22-04-2016 IPR029479 Nitroreductase VCLMA_RS04920 0c59874182bb8688a3ef5fd2eb3a1826 182 PIRSF PIRSF000232 1 182 6.0E-62 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- VCLMA_RS01930 9289bca4af1cdd30acf1dc0c40bebb1c 253 PANTHER PTHR23293:SF5 15 249 8.9E-98 T 22-04-2016 VCLMA_RS01930 9289bca4af1cdd30acf1dc0c40bebb1c 253 Gene3D G3DSA:3.40.50.620 14 219 9.9E-62 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS01930 9289bca4af1cdd30acf1dc0c40bebb1c 253 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 36 246 8.4E-86 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VCLMA_RS01930 9289bca4af1cdd30acf1dc0c40bebb1c 253 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 51 222 7.7E-51 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 VCLMA_RS01930 9289bca4af1cdd30acf1dc0c40bebb1c 253 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 24 245 1.8E-91 T 22-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VCLMA_RS01930 9289bca4af1cdd30acf1dc0c40bebb1c 253 PANTHER PTHR23293 15 249 8.9E-98 T 22-04-2016 VCLMA_RS01930 9289bca4af1cdd30acf1dc0c40bebb1c 253 SUPERFAMILY SSF52402 24 211 7.23E-56 T 22-04-2016 VCLMA_RS01930 9289bca4af1cdd30acf1dc0c40bebb1c 253 PIRSF PIRSF000857 5 251 1.6E-56 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VCLMA_RS01930 9289bca4af1cdd30acf1dc0c40bebb1c 253 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 12 246 39.912 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 VCLMA_RS07155 e9d93ac8d7e1fbb036252e049986cfc7 392 Gene3D G3DSA:1.25.40.10 118 230 2.0E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS07155 e9d93ac8d7e1fbb036252e049986cfc7 392 Gene3D G3DSA:1.25.40.10 33 117 2.2E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS07155 e9d93ac8d7e1fbb036252e049986cfc7 392 SUPERFAMILY SSF48452 263 389 6.25E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS07155 e9d93ac8d7e1fbb036252e049986cfc7 392 SUPERFAMILY SSF48452 32 232 1.71E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS07155 e9d93ac8d7e1fbb036252e049986cfc7 392 Gene3D G3DSA:1.25.40.10 276 368 1.3E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS01820 b3166fb672cc9508d564a687bdb94902 62 PANTHER PTHR37424 2 61 2.1E-20 T 22-04-2016 VCLMA_RS01820 b3166fb672cc9508d564a687bdb94902 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 3.3E-14 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain VCLMA_RS01820 b3166fb672cc9508d564a687bdb94902 62 PANTHER PTHR37424:SF1 2 61 2.1E-20 T 22-04-2016 VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 Gene3D G3DSA:1.10.1740.10 23 116 1.8E-21 T 22-04-2016 VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 8.5E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 Pfam PF08281 Sigma-70, region 4 119 171 4.3E-11 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 SUPERFAMILY SSF88946 23 108 6.28E-20 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 Gene3D G3DSA:1.10.10.10 117 176 4.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 SUPERFAMILY SSF88659 116 176 1.57E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 Pfam PF04542 Sigma-70 region 2 29 95 1.8E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 PANTHER PTHR30173:SF6 23 183 2.9E-59 T 22-04-2016 VCLMA_RS04905 f3caeb09cb4eda99d75c64b9376e1b11 187 PANTHER PTHR30173 23 183 2.9E-59 T 22-04-2016 VCLMA_RS02540 1762fd02666a474349f857f1e4eb3d22 94 PANTHER PTHR37485 2 94 1.0E-46 T 22-04-2016 VCLMA_RS02540 1762fd02666a474349f857f1e4eb3d22 94 Pfam PF04977 Septum formation initiator 11 89 1.8E-27 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 VCLMA_RS02540 1762fd02666a474349f857f1e4eb3d22 94 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.636 T 22-04-2016 IPR023081 Cell division protein FtsB VCLMA_RS02540 1762fd02666a474349f857f1e4eb3d22 94 PANTHER PTHR37485:SF1 2 94 1.0E-46 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 PANTHER PTHR38831 1 336 8.9E-91 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 PANTHER PTHR38831:SF1 1 336 8.9E-91 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 Pfam PF03934 Type II secretion system (T2SS), protein K 30 317 2.0E-89 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 Gene3D G3DSA:3.30.1300.30 26 103 1.3E-31 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 SUPERFAMILY SSF54523 36 100 9.73E-38 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 SUPERFAMILY SSF54523 285 325 9.73E-38 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 SUPERFAMILY SSF158544 101 213 1.54E-28 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 Gene3D G3DSA:1.10.40.60 216 285 4.0E-28 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 Gene3D G3DSA:1.10.40.60 104 214 8.7E-35 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 SUPERFAMILY SSF158544 215 284 1.02E-19 T 22-04-2016 VCLMA_RS12700 605b8a5e3f7efb5d0b470e9580d7968c 336 PIRSF PIRSF002786 1 328 6.6E-64 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 Gene3D G3DSA:3.40.120.10 2 179 5.2E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 135 3.7E-39 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 SUPERFAMILY SSF53738 2 187 3.92E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 419 465 1.7E-9 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 SUPERFAMILY SSF55957 374 466 2.22E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 PANTHER PTHR22573 1 468 2.0E-136 T 22-04-2016 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 Gene3D G3DSA:3.40.120.10 256 382 3.6E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 1.4E-24 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 PANTHER PTHR22573:SF2 1 468 2.0E-136 T 22-04-2016 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 Gene3D G3DSA:3.30.310.50 395 468 8.2E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 SUPERFAMILY SSF53738 250 379 4.71E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 6.5E-26 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS02970 7c786db339a1a26a29d6d750bfd94125 470 Gene3D G3DSA:3.40.120.10 181 255 6.9E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 Gene3D G3DSA:1.20.1250.20 13 197 5.3E-19 T 22-04-2016 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 Gene3D G3DSA:1.20.1250.20 270 473 1.2E-7 T 22-04-2016 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 PANTHER PTHR11654:SF99 5 213 3.5E-238 T 22-04-2016 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 PANTHER PTHR11654:SF99 254 491 3.5E-238 T 22-04-2016 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 PANTHER PTHR11654 5 213 3.5E-238 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 PANTHER PTHR11654 254 491 3.5E-238 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 147 159 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 67 91 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 480 5.5E-128 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 Pfam PF00854 POT family 79 442 3.1E-80 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 SUPERFAMILY SSF103473 214 480 3.92E-9 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS04620 bc734d90bce60a10802a077e9c0de451 493 SUPERFAMILY SSF103473 4 201 2.75E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS02700 ccff4d35f9efefa14d5f911e6b7c7d88 376 PIRSF PIRSF015658 1 376 5.2E-179 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS02700 ccff4d35f9efefa14d5f911e6b7c7d88 376 PANTHER PTHR35806 1 376 2.0E-198 T 22-04-2016 VCLMA_RS02700 ccff4d35f9efefa14d5f911e6b7c7d88 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 7.5E-171 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS02700 ccff4d35f9efefa14d5f911e6b7c7d88 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 5.5E-159 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 Gene3D G3DSA:3.30.70.20 65 120 1.9E-21 T 22-04-2016 VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 SUPERFAMILY SSF54862 1 183 1.78E-47 T 22-04-2016 VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 Gene3D G3DSA:3.30.70.20 121 181 7.3E-21 T 22-04-2016 VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 Gene3D G3DSA:3.30.70.20 3 64 7.3E-21 T 22-04-2016 VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 PANTHER PTHR11938:SF96 144 182 4.7E-105 T 22-04-2016 VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 PANTHER PTHR11938:SF96 1 125 4.7E-105 T 22-04-2016 VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 PANTHER PTHR11938 144 182 4.7E-105 T 22-04-2016 VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 PANTHER PTHR11938 1 125 4.7E-105 T 22-04-2016 VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS07010 95a2d4ade08767a20ac39f862538d3c5 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 3.2E-10 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 38.257 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 Gene3D G3DSA:3.60.150.10 9 352 7.3E-164 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 PIRSF PIRSF001456 3 360 3.1E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 SUPERFAMILY SSF103263 4 352 5.49E-151 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 Pfam PF01264 Chorismate synthase 10 345 1.9E-145 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 PANTHER PTHR21085 2 351 8.8E-225 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS09750 0b1cd7c47eab2d922252d49bd13cc582 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 2.1E-145 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 VCLMA_RS11490 c542c0ecfd307d89c93920fcfb1a17fa 218 SUPERFAMILY SSF75445 127 198 1.31E-23 T 22-04-2016 VCLMA_RS11490 c542c0ecfd307d89c93920fcfb1a17fa 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 5.7E-68 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VCLMA_RS11490 c542c0ecfd307d89c93920fcfb1a17fa 218 Gene3D G3DSA:3.30.70.260 137 196 4.8E-29 T 22-04-2016 VCLMA_RS11490 c542c0ecfd307d89c93920fcfb1a17fa 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 7.0E-58 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VCLMA_RS11490 c542c0ecfd307d89c93920fcfb1a17fa 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.615 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VCLMA_RS11490 c542c0ecfd307d89c93920fcfb1a17fa 218 PANTHER PTHR11934 1 218 8.7E-147 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 VCLMA_RS11490 c542c0ecfd307d89c93920fcfb1a17fa 218 SUPERFAMILY SSF100950 1 146 1.58E-47 T 22-04-2016 VCLMA_RS11490 c542c0ecfd307d89c93920fcfb1a17fa 218 Gene3D G3DSA:3.40.50.1360 1 136 4.1E-58 T 22-04-2016 VCLMA_RS11490 c542c0ecfd307d89c93920fcfb1a17fa 218 PANTHER PTHR11934:SF11 1 218 8.7E-147 T 22-04-2016 VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 SUPERFAMILY SSF53335 78 393 1.09E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 Gene3D G3DSA:3.30.750.80 72 179 5.1E-36 T 22-04-2016 VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 111 376 2.0E-29 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 Gene3D G3DSA:2.30.130.10 3 71 8.9E-27 T 22-04-2016 IPR015947 PUA-like domain VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 PANTHER PTHR11061:SF12 7 397 9.8E-120 T 22-04-2016 VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.566 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 SMART SM00359 3 87 8.1E-8 T 22-04-2016 IPR002478 PUA domain GO:0003723 VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 Gene3D G3DSA:3.40.50.150 182 396 5.6E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 SUPERFAMILY SSF88697 3 72 4.72E-17 T 22-04-2016 IPR015947 PUA-like domain VCLMA_RS06395 0863884cb63b8f4ceb0a1a0226a0da4a 397 PANTHER PTHR11061 7 397 9.8E-120 T 22-04-2016 VCLMA_RS10200 6678886a32383247175faf974f673ad7 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 85 2.2E-21 T 22-04-2016 IPR005648 Flagellar hook capping protein VCLMA_RS10200 6678886a32383247175faf974f673ad7 235 PANTHER PTHR30435:SF15 15 224 1.7E-60 T 22-04-2016 VCLMA_RS10200 6678886a32383247175faf974f673ad7 235 PANTHER PTHR30435 15 224 1.7E-60 T 22-04-2016 VCLMA_RS10200 6678886a32383247175faf974f673ad7 235 Pfam PF13861 FlgD Tudor-like domain 93 229 1.2E-14 T 22-04-2016 IPR025963 FlgD Tudor-like domain VCLMA_RS10200 6678886a32383247175faf974f673ad7 235 Pfam PF13860 FlgD Ig-like domain 118 184 3.1E-20 T 22-04-2016 IPR025965 FlgD Ig-like domain VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 SUPERFAMILY SSF52172 2 109 1.18E-26 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 Pfam PF01339 CheB methylesterase 192 369 1.2E-58 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 SUPERFAMILY SSF52738 186 371 1.44E-63 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 PANTHER PTHR24421:SF16 1 374 3.9E-186 T 22-04-2016 VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 Gene3D G3DSA:3.40.50.180 184 371 7.6E-73 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 PIRSF PIRSF000876 1 375 1.2E-127 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 Pfam PF00072 Response regulator receiver domain 5 109 3.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 Gene3D G3DSA:3.40.50.2300 2 109 2.4E-30 T 22-04-2016 VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 375 38.991 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 SMART SM00448 3 126 2.9E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS09505 94a8b60f917b350d5bb286917a7daf6c 377 PANTHER PTHR24421 1 374 3.9E-186 T 22-04-2016 VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 PANTHER PTHR10799 1 48 5.7E-19 T 22-04-2016 VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 PANTHER PTHR10799 277 403 5.7E-19 T 22-04-2016 VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 SMART SM00267 230 409 5.9E-36 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 PANTHER PTHR10799:SF774 1 48 5.7E-19 T 22-04-2016 VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 PANTHER PTHR10799:SF774 277 403 5.7E-19 T 22-04-2016 VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 Pfam PF00672 HAMP domain 155 222 2.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 403 7.0E-34 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 Gene3D G3DSA:3.30.70.270 250 410 3.3E-40 T 22-04-2016 VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 SUPERFAMILY SSF55073 253 409 3.53E-35 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS11365 864badae4b356c361e86f0fa186d1b10 430 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 247 407 3.0E-30 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.461 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 SMART SM00846 2 159 4.6E-70 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 PANTHER PTHR10836:SF47 1 337 3.8E-240 T 22-04-2016 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 1.8E-56 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 SUPERFAMILY SSF55347 159 321 9.23E-59 T 22-04-2016 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 5.0E-198 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 5.0E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 5.0E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 5.0E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 5.0E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 5.0E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 SUPERFAMILY SSF51735 2 185 6.61E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 Gene3D G3DSA:3.40.50.720 1 167 5.0E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 Gene3D G3DSA:3.30.360.10 168 322 4.4E-62 T 22-04-2016 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 PANTHER PTHR10836 1 337 3.8E-240 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 PIRSF PIRSF000149 1 341 2.1E-125 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS02410 50c359cebe891f129fd118400d8e3a1d 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 159 1.3E-47 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05455 73a4634ebebabe271c179d4b489e26bb 342 PANTHER PTHR21152 14 340 3.9E-177 T 22-04-2016 VCLMA_RS05455 73a4634ebebabe271c179d4b489e26bb 342 Gene3D G3DSA:3.90.1150.10 240 340 3.1E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS05455 73a4634ebebabe271c179d4b489e26bb 342 SUPERFAMILY SSF53383 2 339 2.47E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS05455 73a4634ebebabe271c179d4b489e26bb 342 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 341 46.266 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VCLMA_RS05455 73a4634ebebabe271c179d4b489e26bb 342 PIRSF PIRSF000525 1 342 3.0E-144 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VCLMA_RS05455 73a4634ebebabe271c179d4b489e26bb 342 Gene3D G3DSA:3.40.640.10 2 239 1.4E-99 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS05455 73a4634ebebabe271c179d4b489e26bb 342 PANTHER PTHR21152:SF1 14 340 3.9E-177 T 22-04-2016 VCLMA_RS05455 73a4634ebebabe271c179d4b489e26bb 342 Pfam PF00266 Aminotransferase class-V 3 330 6.9E-56 T 22-04-2016 IPR000192 Aminotransferase class V domain VCLMA_RS05455 73a4634ebebabe271c179d4b489e26bb 342 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 2 341 8.0E-152 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 VCLMA_RS04050 435f631953ab5ee471a1b305899ad4d4 175 Gene3D G3DSA:3.40.140.10 7 153 5.3E-60 T 22-04-2016 VCLMA_RS04050 435f631953ab5ee471a1b305899ad4d4 175 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 14 155 44.951 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VCLMA_RS04050 435f631953ab5ee471a1b305899ad4d4 175 PANTHER PTHR11079:SF72 10 157 2.6E-49 T 22-04-2016 VCLMA_RS04050 435f631953ab5ee471a1b305899ad4d4 175 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 96 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VCLMA_RS04050 435f631953ab5ee471a1b305899ad4d4 175 SUPERFAMILY SSF53927 6 159 6.19E-57 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 VCLMA_RS04050 435f631953ab5ee471a1b305899ad4d4 175 Pfam PF14437 MafB19-like deaminase 9 155 1.5E-32 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 VCLMA_RS04050 435f631953ab5ee471a1b305899ad4d4 175 PANTHER PTHR11079 10 157 2.6E-49 T 22-04-2016 VCLMA_RS04810 57cddbe9e5a4223d0ec4d4722dad8a94 159 SUPERFAMILY SSF55040 11 155 7.32E-62 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VCLMA_RS04810 57cddbe9e5a4223d0ec4d4722dad8a94 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.202 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 VCLMA_RS04810 57cddbe9e5a4223d0ec4d4722dad8a94 159 Pfam PF01967 MoaC family 15 150 2.8E-56 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VCLMA_RS04810 57cddbe9e5a4223d0ec4d4722dad8a94 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.7E-71 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 VCLMA_RS04810 57cddbe9e5a4223d0ec4d4722dad8a94 159 PANTHER PTHR22960 1 158 2.0E-115 T 22-04-2016 VCLMA_RS04810 57cddbe9e5a4223d0ec4d4722dad8a94 159 Gene3D G3DSA:3.30.70.640 3 157 2.6E-70 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 VCLMA_RS01245 f67eaf32a8e7e1a712c918234ab4f1e7 223 PIRSF PIRSF018432 1 223 1.2E-158 T 22-04-2016 IPR016725 Ogawa serotype, WbeT VCLMA_RS01245 f67eaf32a8e7e1a712c918234ab4f1e7 223 Gene3D G3DSA:3.40.50.150 8 187 1.7E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS01245 f67eaf32a8e7e1a712c918234ab4f1e7 223 SUPERFAMILY SSF53335 9 197 3.23E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS01245 f67eaf32a8e7e1a712c918234ab4f1e7 223 Pfam PF05575 Vibrio cholerae RfbT protein 1 223 2.2E-159 T 22-04-2016 IPR008890 Vibrio cholerae RfbT VCLMA_RS01245 f67eaf32a8e7e1a712c918234ab4f1e7 223 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 19 159 2.4E-30 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 Gene3D G3DSA:3.10.50.40 259 382 5.1E-41 T 22-04-2016 VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 Pfam PF13624 SurA N-terminal domain 1 163 7.6E-45 T 22-04-2016 VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 PANTHER PTHR10657 200 526 3.8E-212 T 22-04-2016 VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 PANTHER PTHR10657 1 172 3.8E-212 T 22-04-2016 VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 SUPERFAMILY SSF54534 221 358 3.4E-30 T 22-04-2016 VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 Pfam PF13616 PPIC-type PPIASE domain 259 359 3.0E-25 T 22-04-2016 VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 PANTHER PTHR10657:SF13 200 526 3.8E-212 T 22-04-2016 VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 PANTHER PTHR10657:SF13 1 172 3.8E-212 T 22-04-2016 VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 SUPERFAMILY SSF109998 200 238 3.27E-33 T 22-04-2016 IPR027304 Trigger factor/SurA domain VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 SUPERFAMILY SSF109998 44 166 3.27E-33 T 22-04-2016 IPR027304 Trigger factor/SurA domain VCLMA_RS08810 45eee84dc839e5f6c60a2bdd0a4b3118 616 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 296 317 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 Gene3D G3DSA:3.40.50.450 123 450 1.3E-125 T 22-04-2016 VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 SUPERFAMILY SSF102405 119 326 1.53E-41 T 22-04-2016 VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 4.0E-51 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 PANTHER PTHR31223 83 339 1.1E-185 T 22-04-2016 VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 PANTHER PTHR31223 356 381 1.1E-185 T 22-04-2016 VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 Gene3D G3DSA:3.30.1850.10 1 113 4.5E-57 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 Pfam PF03641 Possible lysine decarboxylase 187 326 1.6E-37 T 22-04-2016 IPR031100 LOG family VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 PANTHER PTHR31223:SF12 83 339 1.1E-185 T 22-04-2016 VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 PANTHER PTHR31223:SF12 356 381 1.1E-185 T 22-04-2016 VCLMA_RS04210 6af2c488615d0eac7ac97f9535eb8291 452 Pfam PF11892 Domain of unknown function (DUF3412) 330 451 1.5E-57 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 VCLMA_RS10180 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PANTHER PTHR34933:SF2 1 255 3.1E-158 T 22-04-2016 VCLMA_RS10180 1cb3c27b7aac7a30fb4e10b605e34f0b 258 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 258 28.311 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VCLMA_RS10180 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PANTHER PTHR34933 1 255 3.1E-158 T 22-04-2016 VCLMA_RS10180 1cb3c27b7aac7a30fb4e10b605e34f0b 258 Pfam PF02107 Flagellar L-ring protein 80 255 6.6E-58 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VCLMA_RS10180 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 237 251 1.8E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VCLMA_RS10180 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 221 235 1.8E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VCLMA_RS10180 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 200 216 1.8E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VCLMA_RS10180 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 174 189 1.8E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VCLMA_RS10180 1cb3c27b7aac7a30fb4e10b605e34f0b 258 PRINTS PR01008 Flagellar L-ring protein signature 102 114 1.8E-21 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.6E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PANTHER PTHR33705 1 84 6.5E-37 T 22-04-2016 VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 SUPERFAMILY SSF55594 1 82 3.01E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 6.5E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 6.5E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 6.5E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 Gene3D G3DSA:3.30.1340.10 1 83 1.0E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 PANTHER PTHR33705:SF1 1 84 6.5E-37 T 22-04-2016 VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VCLMA_RS04515 cceb840ef05a8b4ddaea4cc3d6c6e170 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.0E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 Pfam PF01134 Glucose inhibited division protein A 8 399 3.6E-170 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 SMART SM01228 546 617 5.8E-42 T 22-04-2016 VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 Pfam PF13932 GidA associated domain 403 616 1.8E-70 T 22-04-2016 IPR026904 GidA associated domain 3 VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 4.3E-292 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.43 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 Gene3D G3DSA:3.50.50.60 7 234 1.5E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 SUPERFAMILY SSF51905 6 66 2.09E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 SUPERFAMILY SSF51905 97 261 2.09E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 PANTHER PTHR11806:SF0 1 627 0.0 T 22-04-2016 VCLMA_RS13000 0b73fb4f47928a7f52cb1776f85e9a89 631 PANTHER PTHR11806 1 627 0.0 T 22-04-2016 VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 Gene3D G3DSA:3.90.180.10 14 139 1.2E-8 T 22-04-2016 IPR011032 GroES-like VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 SMART SM00829 8 324 3.9E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 Gene3D G3DSA:3.40.50.720 140 292 3.3E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 4 326 3.6E-138 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 PANTHER PTHR11695 16 326 2.7E-169 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 SUPERFAMILY SSF50129 2 145 2.67E-44 T 22-04-2016 IPR011032 GroES-like VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 SUPERFAMILY SSF51735 116 289 1.13E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 PANTHER PTHR11695:SF13 16 326 2.7E-169 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 1.9E-4 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VCLMA_RS00125 cbaa7a9f5756d7eef8ad7d741906606f 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 5.4E-14 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VCLMA_RS02610 47aa573b53c9b7acde4fb9f6b257a394 168 Gene3D G3DSA:3.90.950.20 3 160 6.0E-55 T 22-04-2016 IPR008136 CinA, C-terminal VCLMA_RS02610 47aa573b53c9b7acde4fb9f6b257a394 168 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 157 5.9E-48 T 22-04-2016 IPR008136 CinA, C-terminal VCLMA_RS02610 47aa573b53c9b7acde4fb9f6b257a394 168 Pfam PF02464 Competence-damaged protein 5 158 5.5E-55 T 22-04-2016 IPR008136 CinA, C-terminal VCLMA_RS02610 47aa573b53c9b7acde4fb9f6b257a394 168 SUPERFAMILY SSF142433 3 159 1.12E-53 T 22-04-2016 IPR008136 CinA, C-terminal VCLMA_RS02610 47aa573b53c9b7acde4fb9f6b257a394 168 PANTHER PTHR13939 4 167 1.8E-76 T 22-04-2016 VCLMA_RS02855 1d832f8e576a1a4436238dd4980fc340 177 Pfam PF00156 Phosphoribosyl transferase domain 12 159 3.9E-28 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 VCLMA_RS02855 1d832f8e576a1a4436238dd4980fc340 177 PANTHER PTHR22573 1 170 3.1E-79 T 22-04-2016 VCLMA_RS02855 1d832f8e576a1a4436238dd4980fc340 177 Gene3D G3DSA:3.40.50.2020 2 173 7.1E-79 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS02855 1d832f8e576a1a4436238dd4980fc340 177 SUPERFAMILY SSF53271 3 174 1.84E-55 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS02855 1d832f8e576a1a4436238dd4980fc340 177 PANTHER PTHR22573:SF56 1 170 3.1E-79 T 22-04-2016 VCLMA_RS02855 1d832f8e576a1a4436238dd4980fc340 177 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 2.0E-75 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 Gene3D G3DSA:1.10.287.950 314 528 2.0E-49 T 22-04-2016 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 Pfam PF00672 HAMP domain 214 282 2.4E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 PANTHER PTHR32089 207 563 1.1E-129 T 22-04-2016 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 PANTHER PTHR32089 1 187 1.1E-129 T 22-04-2016 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 425 2.6E-27 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 427 456 2.6E-27 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 321 350 2.6E-27 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 PANTHER PTHR32089:SF1 207 563 1.1E-129 T 22-04-2016 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 PANTHER PTHR32089:SF1 1 187 1.1E-129 T 22-04-2016 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 SUPERFAMILY SSF58104 253 560 7.19E-67 T 22-04-2016 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 373 560 8.4E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 SMART SM00304 233 285 2.5E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS06625 ff558c777d9b6d386e0566d898ebf556 563 SMART SM00283 300 561 1.1E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS11750 3863118388a7cd99cf10fe08237c6f8c 187 PANTHER PTHR37481 1 187 1.6E-70 T 22-04-2016 VCLMA_RS11750 3863118388a7cd99cf10fe08237c6f8c 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 25.4 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VCLMA_RS11750 3863118388a7cd99cf10fe08237c6f8c 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 5 182 4.1E-50 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VCLMA_RS11750 3863118388a7cd99cf10fe08237c6f8c 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 7.6E-51 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related VCLMA_RS11750 3863118388a7cd99cf10fe08237c6f8c 187 PANTHER PTHR37481:SF1 1 187 1.6E-70 T 22-04-2016 VCLMA_RS11750 3863118388a7cd99cf10fe08237c6f8c 187 PIRSF PIRSF028513 3 185 2.6E-29 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 Gene3D G3DSA:1.20.1250.20 263 460 2.0E-15 T 22-04-2016 VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 Gene3D G3DSA:1.20.1250.20 20 197 1.7E-27 T 22-04-2016 VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 Pfam PF07690 Major Facilitator Superfamily 22 401 2.1E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 PANTHER PTHR23501:SF73 3 458 3.8E-143 T 22-04-2016 VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 4.5E-6 T 22-04-2016 VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 392 411 4.5E-6 T 22-04-2016 VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 4.5E-6 T 22-04-2016 VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 SUPERFAMILY SSF103473 13 203 1.44E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 SUPERFAMILY SSF103473 246 462 1.44E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS06560 58dd803785906390ca3a4122d63117e5 468 PANTHER PTHR23501 3 458 3.8E-143 T 22-04-2016 VCLMA_RS04585 54fb05cb1485608fa5f4115e93e3873a 182 SUPERFAMILY SSF56300 1 164 3.38E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS04585 54fb05cb1485608fa5f4115e93e3873a 182 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 169 1.6E-33 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VCLMA_RS04585 54fb05cb1485608fa5f4115e93e3873a 182 Gene3D G3DSA:3.60.21.10 1 168 8.4E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS04585 54fb05cb1485608fa5f4115e93e3873a 182 PANTHER PTHR11124:SF14 1 168 5.1E-67 T 22-04-2016 VCLMA_RS04585 54fb05cb1485608fa5f4115e93e3873a 182 PANTHER PTHR11124 1 168 5.1E-67 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 VCLMA_RS04585 54fb05cb1485608fa5f4115e93e3873a 182 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 160 1.9E-25 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type VCLMA_RS04585 54fb05cb1485608fa5f4115e93e3873a 182 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 22-04-2016 IPR020935 Phosphodiesterase YfcE, conserved site KEGG: 00564+3.1.4.-|KEGG: 00565+3.1.4.- VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 SMART SM00421 198 255 1.9E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 PANTHER PTHR26402 200 259 9.4E-14 T 22-04-2016 VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 PANTHER PTHR26402 171 184 9.4E-14 T 22-04-2016 VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 Gene3D G3DSA:1.10.10.10 199 258 3.6E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 PANTHER PTHR26402:SF572 200 259 9.4E-14 T 22-04-2016 VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 PANTHER PTHR26402:SF572 171 184 9.4E-14 T 22-04-2016 VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 SUPERFAMILY SSF46894 186 258 4.08E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 215 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 215 231 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 231 243 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS02345 88fe45f4095df4c48918304758fefb61 265 Pfam PF00196 Bacterial regulatory proteins, luxR family 200 254 2.3E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VCLMA_RS08140 b29135d1ed090cd99ebed2e6c5377027 191 Gene3D G3DSA:3.40.50.10610 17 186 7.4E-27 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component VCLMA_RS08140 b29135d1ed090cd99ebed2e6c5377027 191 SUPERFAMILY SSF159594 24 189 1.88E-34 T 22-04-2016 VCLMA_RS08140 b29135d1ed090cd99ebed2e6c5377027 191 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 184 2.0E-41 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 SUPERFAMILY SSF52440 1 88 1.44E-16 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 Gene3D G3DSA:3.30.1490.20 107 165 4.7E-22 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 SUPERFAMILY SSF56059 92 295 4.42E-55 T 22-04-2016 VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 SUPERFAMILY SSF51246 299 373 5.73E-19 T 22-04-2016 IPR011054 Rudiment single hybrid motif VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 Gene3D G3DSA:3.30.470.20 177 359 6.9E-61 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 350 3.3E-105 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 Gene3D G3DSA:3.40.50.20 1 82 1.6E-22 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 PANTHER PTHR11609:SF5 1 353 2.8E-115 T 22-04-2016 VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 346 36.832 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 Pfam PF02222 ATP-grasp domain 101 274 2.6E-50 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VCLMA_RS00250 65615377c692fe6824de7adc999c900c 377 PANTHER PTHR11609 1 353 2.8E-115 T 22-04-2016 VCLMA_RS11480 079a6ce82e23d808168b97682d9881d5 102 PANTHER PTHR34981:SF1 2 102 9.4E-28 T 22-04-2016 VCLMA_RS11480 079a6ce82e23d808168b97682d9881d5 102 PANTHER PTHR34981 2 102 9.4E-28 T 22-04-2016 VCLMA_RS11480 079a6ce82e23d808168b97682d9881d5 102 SUPERFAMILY SSF102829 6 95 1.96E-24 T 22-04-2016 IPR007838 Cell division protein ZapA-like VCLMA_RS11480 079a6ce82e23d808168b97682d9881d5 102 Pfam PF05164 Cell division protein ZapA 6 89 3.2E-20 T 22-04-2016 IPR007838 Cell division protein ZapA-like VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 PANTHER PTHR10617:SF52 470 532 3.7E-181 T 22-04-2016 VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 PANTHER PTHR10617:SF52 75 390 3.7E-181 T 22-04-2016 VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 PANTHER PTHR10617 470 532 3.7E-181 T 22-04-2016 VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 PANTHER PTHR10617 75 390 3.7E-181 T 22-04-2016 VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 SUPERFAMILY SSF51905 100 286 4.06E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 SUPERFAMILY SSF51905 479 529 4.06E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 PIRSF PIRSF038984 1 534 5.5E-240 T 22-04-2016 IPR028348 FAD dependent protein VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 Gene3D G3DSA:3.50.50.60 100 288 5.3E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 Gene3D G3DSA:3.50.50.60 473 530 5.3E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS03910 2e8ce253b1b966115c7bd065cd1a0dd7 537 Pfam PF01593 Flavin containing amine oxidoreductase 214 268 2.3E-4 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 VCLMA_RS04675 0f4b02f4b65f42dc3a7f3fd96ce4ee5f 264 PANTHER PTHR11142 1 259 1.9E-103 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04675 0f4b02f4b65f42dc3a7f3fd96ce4ee5f 264 Gene3D G3DSA:3.30.70.580 1 104 1.1E-39 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04675 0f4b02f4b65f42dc3a7f3fd96ce4ee5f 264 PIRSF PIRSF001430 1 253 4.3E-78 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04675 0f4b02f4b65f42dc3a7f3fd96ce4ee5f 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 3.8E-77 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04675 0f4b02f4b65f42dc3a7f3fd96ce4ee5f 264 Pfam PF01416 tRNA pseudouridine synthase 8 103 8.8E-13 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04675 0f4b02f4b65f42dc3a7f3fd96ce4ee5f 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 8.4E-29 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04675 0f4b02f4b65f42dc3a7f3fd96ce4ee5f 264 Gene3D G3DSA:3.30.70.660 106 241 1.1E-46 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04675 0f4b02f4b65f42dc3a7f3fd96ce4ee5f 264 SUPERFAMILY SSF55120 1 256 4.03E-94 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS04675 0f4b02f4b65f42dc3a7f3fd96ce4ee5f 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 35.536 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03965 a7064a92a2142a78f93738698fff7053 403 PANTHER PTHR30629 2 403 7.7E-188 T 22-04-2016 VCLMA_RS03965 a7064a92a2142a78f93738698fff7053 403 SUPERFAMILY SSF56349 106 386 1.03E-61 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VCLMA_RS03965 a7064a92a2142a78f93738698fff7053 403 Gene3D G3DSA:1.10.443.10 213 383 1.3E-25 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VCLMA_RS03965 a7064a92a2142a78f93738698fff7053 403 Gene3D G3DSA:1.10.150.130 106 206 1.7E-17 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VCLMA_RS03965 a7064a92a2142a78f93738698fff7053 403 Pfam PF00589 Phage integrase family 214 376 2.4E-27 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VCLMA_RS03965 a7064a92a2142a78f93738698fff7053 403 Pfam PF13356 Domain of unknown function (DUF4102) 8 95 5.6E-18 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 VCLMA_RS03965 a7064a92a2142a78f93738698fff7053 403 PANTHER PTHR30629:SF2 2 403 7.7E-188 T 22-04-2016 VCLMA_RS04395 40f4e2fafc4f3e212ac4da56c47dd166 416 Gene3D G3DSA:3.90.1150.10 284 415 4.3E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS04395 40f4e2fafc4f3e212ac4da56c47dd166 416 Gene3D G3DSA:3.40.640.10 37 283 4.8E-110 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS04395 40f4e2fafc4f3e212ac4da56c47dd166 416 PANTHER PTHR11680 1 415 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VCLMA_RS04395 40f4e2fafc4f3e212ac4da56c47dd166 416 SUPERFAMILY SSF53383 6 415 3.67E-185 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS04395 40f4e2fafc4f3e212ac4da56c47dd166 416 Pfam PF00464 Serine hydroxymethyltransferase 8 385 3.8E-184 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VCLMA_RS04395 40f4e2fafc4f3e212ac4da56c47dd166 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VCLMA_RS04395 40f4e2fafc4f3e212ac4da56c47dd166 416 PIRSF PIRSF000412 1 415 4.5E-170 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VCLMA_RS04395 40f4e2fafc4f3e212ac4da56c47dd166 416 PANTHER PTHR11680:SF9 1 415 0.0 T 22-04-2016 VCLMA_RS04395 40f4e2fafc4f3e212ac4da56c47dd166 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 52.642 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 VCLMA_RS11235 8c1c302d3e127065599e6438474587dc 202 SUPERFAMILY SSF52540 1 192 4.0E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11235 8c1c302d3e127065599e6438474587dc 202 PANTHER PTHR10695 1 195 5.5E-74 T 22-04-2016 VCLMA_RS11235 8c1c302d3e127065599e6438474587dc 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 27.002 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VCLMA_RS11235 8c1c302d3e127065599e6438474587dc 202 Pfam PF01121 Dephospho-CoA kinase 4 180 2.9E-70 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VCLMA_RS11235 8c1c302d3e127065599e6438474587dc 202 Gene3D G3DSA:3.40.50.300 2 197 3.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11235 8c1c302d3e127065599e6438474587dc 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 3.7E-65 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 VCLMA_RS02005 d039e5f1dbc2de3c196dc9023be7a4bb 177 PANTHER PTHR10302:SF0 1 177 1.5E-57 T 22-04-2016 VCLMA_RS02005 d039e5f1dbc2de3c196dc9023be7a4bb 177 PANTHER PTHR10302 1 177 1.5E-57 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VCLMA_RS02005 d039e5f1dbc2de3c196dc9023be7a4bb 177 Pfam PF00436 Single-strand binding protein family 6 105 3.4E-43 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VCLMA_RS02005 d039e5f1dbc2de3c196dc9023be7a4bb 177 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 39.537 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VCLMA_RS02005 d039e5f1dbc2de3c196dc9023be7a4bb 177 PIRSF PIRSF002070 2 174 3.5E-38 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VCLMA_RS02005 d039e5f1dbc2de3c196dc9023be7a4bb 177 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 177 1.0E-61 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 VCLMA_RS02005 d039e5f1dbc2de3c196dc9023be7a4bb 177 Gene3D G3DSA:2.40.50.140 4 177 1.2E-56 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS02005 d039e5f1dbc2de3c196dc9023be7a4bb 177 SUPERFAMILY SSF50249 4 177 1.58E-60 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS05030 a8a013a59ad971f7da7949fd0d168baa 165 PANTHER PTHR23339:SF64 23 161 2.3E-29 T 22-04-2016 VCLMA_RS05030 a8a013a59ad971f7da7949fd0d168baa 165 Gene3D G3DSA:3.90.190.10 15 163 2.3E-39 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VCLMA_RS05030 a8a013a59ad971f7da7949fd0d168baa 165 PANTHER PTHR23339 23 161 2.3E-29 T 22-04-2016 VCLMA_RS05030 a8a013a59ad971f7da7949fd0d168baa 165 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 111 121 - T 22-04-2016 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311|GO:0016791 VCLMA_RS05030 a8a013a59ad971f7da7949fd0d168baa 165 SUPERFAMILY SSF52799 15 163 3.67E-35 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like VCLMA_RS05030 a8a013a59ad971f7da7949fd0d168baa 165 Pfam PF00782 Dual specificity phosphatase, catalytic domain 34 149 3.3E-9 T 22-04-2016 IPR000340 Dual specificity phosphatase, catalytic domain GO:0006470|GO:0008138 VCLMA_RS07265 2b2c8ee342a99914f588f76756f5937f 425 Pfam PF12704 MacB-like periplasmic core domain 20 253 5.5E-22 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VCLMA_RS07265 2b2c8ee342a99914f588f76756f5937f 425 Pfam PF02687 FtsX-like permease family 294 418 5.7E-16 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VCLMA_RS07265 2b2c8ee342a99914f588f76756f5937f 425 PANTHER PTHR30572 4 425 2.0E-68 T 22-04-2016 VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 Gene3D G3DSA:2.40.100.10 2 162 1.4E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 PIRSF PIRSF001467 1 163 6.2E-28 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 4.8E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 4.8E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 4.8E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 SUPERFAMILY SSF50891 1 162 6.57E-58 T 22-04-2016 IPR029000 Cyclophilin-like domain VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 PANTHER PTHR11071:SF192 1 162 6.9E-79 T 22-04-2016 VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 PANTHER PTHR11071 1 162 6.9E-79 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VCLMA_RS08480 dd72a0416b5d16039da6fabd3dc86717 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 7.7E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VCLMA_RS05835 5acedc6a4fb9463f1220b0c662f922bc 148 SUPERFAMILY SSF51316 23 144 5.23E-52 T 22-04-2016 IPR011057 Mss4-like VCLMA_RS05835 5acedc6a4fb9463f1220b0c662f922bc 148 Gene3D G3DSA:2.170.150.20 20 144 9.7E-54 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VCLMA_RS05835 5acedc6a4fb9463f1220b0c662f922bc 148 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 144 6.3E-51 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VCLMA_RS05835 5acedc6a4fb9463f1220b0c662f922bc 148 Pfam PF01641 SelR domain 28 144 3.7E-47 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 VCLMA_RS05835 5acedc6a4fb9463f1220b0c662f922bc 148 PANTHER PTHR10173 17 142 3.3E-49 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 VCLMA_RS05835 5acedc6a4fb9463f1220b0c662f922bc 148 PANTHER PTHR10173:SF18 17 142 3.3E-49 T 22-04-2016 VCLMA_RS06605 79217a1f0a2dda2b95bb0c9e6427ed3e 218 Gene3D G3DSA:1.25.10.10 60 187 1.1E-12 T 22-04-2016 IPR011989 Armadillo-like helical VCLMA_RS06605 79217a1f0a2dda2b95bb0c9e6427ed3e 218 SUPERFAMILY SSF48371 23 189 7.4E-13 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 VCLMA_RS02040 4e2f057407dc2bf3f5a5e2d4ec12c5d7 383 SMART SM00028 192 225 26.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS02040 4e2f057407dc2bf3f5a5e2d4ec12c5d7 383 SMART SM00028 292 325 10.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS02040 4e2f057407dc2bf3f5a5e2d4ec12c5d7 383 SMART SM00028 226 259 170.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS02040 4e2f057407dc2bf3f5a5e2d4ec12c5d7 383 SUPERFAMILY SSF48452 192 354 1.71E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS02040 4e2f057407dc2bf3f5a5e2d4ec12c5d7 383 Gene3D G3DSA:1.25.40.10 291 354 1.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS02040 4e2f057407dc2bf3f5a5e2d4ec12c5d7 383 Gene3D G3DSA:1.25.40.10 183 280 6.3E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS02040 4e2f057407dc2bf3f5a5e2d4ec12c5d7 383 Pfam PF14559 Tetratricopeptide repeat 202 269 1.3E-5 T 22-04-2016 VCLMA_RS07390 73a51cef01a0369d50d7f6e1d3c4a3dc 350 PANTHER PTHR10091:SF0 1 350 2.0E-141 T 22-04-2016 VCLMA_RS07390 73a51cef01a0369d50d7f6e1d3c4a3dc 350 SUPERFAMILY SSF74650 5 348 4.96E-110 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VCLMA_RS07390 73a51cef01a0369d50d7f6e1d3c4a3dc 350 PANTHER PTHR10091 1 350 2.0E-141 T 22-04-2016 VCLMA_RS07390 73a51cef01a0369d50d7f6e1d3c4a3dc 350 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 174 183 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VCLMA_RS07390 73a51cef01a0369d50d7f6e1d3c4a3dc 350 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 16 348 1.7E-142 T 22-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VCLMA_RS07390 73a51cef01a0369d50d7f6e1d3c4a3dc 350 Pfam PF01263 Aldose 1-epimerase 21 347 7.1E-94 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VCLMA_RS07390 73a51cef01a0369d50d7f6e1d3c4a3dc 350 Gene3D G3DSA:2.70.98.10 13 348 3.2E-118 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VCLMA_RS07390 73a51cef01a0369d50d7f6e1d3c4a3dc 350 PIRSF PIRSF005096 2 350 6.0E-119 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 VCLMA_RS03895 fe49a1711e6681b07a44c5d75bd5ec06 132 SUPERFAMILY SSF55021 2 65 1.37E-18 T 22-04-2016 VCLMA_RS03895 fe49a1711e6681b07a44c5d75bd5ec06 132 SUPERFAMILY SSF55021 70 128 4.87E-20 T 22-04-2016 VCLMA_RS03895 fe49a1711e6681b07a44c5d75bd5ec06 132 Gene3D G3DSA:3.30.2130.10 1 131 9.9E-56 T 22-04-2016 VCLMA_RS03895 fe49a1711e6681b07a44c5d75bd5ec06 132 PANTHER PTHR39199 1 132 2.3E-64 T 22-04-2016 VCLMA_RS03895 fe49a1711e6681b07a44c5d75bd5ec06 132 PANTHER PTHR39199:SF1 1 132 2.3E-64 T 22-04-2016 VCLMA_RS03895 fe49a1711e6681b07a44c5d75bd5ec06 132 Pfam PF13840 ACT domain 72 126 2.4E-13 T 22-04-2016 IPR027795 GATS-like ACT domain VCLMA_RS03895 fe49a1711e6681b07a44c5d75bd5ec06 132 Pfam PF10000 ACT domain 2 68 1.8E-25 T 22-04-2016 IPR018717 Domain of unknown function DUF2241 VCLMA_RS09140 83f70cc80d24f7cc969daa9643ae2203 237 Pfam PF00814 Glycoprotease family 30 163 6.9E-32 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 VCLMA_RS09140 83f70cc80d24f7cc969daa9643ae2203 237 Gene3D G3DSA:3.30.420.40 4 131 2.5E-45 T 22-04-2016 VCLMA_RS09140 83f70cc80d24f7cc969daa9643ae2203 237 PANTHER PTHR11735:SF11 1 137 2.3E-59 T 22-04-2016 VCLMA_RS09140 83f70cc80d24f7cc969daa9643ae2203 237 PANTHER PTHR11735 1 137 2.3E-59 T 22-04-2016 VCLMA_RS09140 83f70cc80d24f7cc969daa9643ae2203 237 SUPERFAMILY SSF53067 111 223 1.09E-22 T 22-04-2016 VCLMA_RS09140 83f70cc80d24f7cc969daa9643ae2203 237 SUPERFAMILY SSF53067 4 107 1.81E-31 T 22-04-2016 VCLMA_RS09140 83f70cc80d24f7cc969daa9643ae2203 237 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 225 6.5E-68 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 7.5E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 Gene3D G3DSA:3.10.430.100 61 149 3.7E-28 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 Gene3D G3DSA:3.40.5.10 1 52 3.0E-25 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.8E-55 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 6.2E-25 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.285 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 SUPERFAMILY SSF55658 1 57 3.84E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 SUPERFAMILY SSF55653 60 149 6.93E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal VCLMA_RS01845 7eb32ac95c1bc7fa4ad01d787464972b 149 PANTHER PTHR21368 1 149 2.4E-51 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS03680 7afb7502d8fc02e032a1ce7ecbd34218 360 PANTHER PTHR34475 14 360 6.4E-56 T 22-04-2016 VCLMA_RS03680 7afb7502d8fc02e032a1ce7ecbd34218 360 Pfam PF13464 Domain of unknown function (DUF4115) 286 359 7.0E-25 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 VCLMA_RS03680 7afb7502d8fc02e032a1ce7ecbd34218 360 Gene3D G3DSA:1.10.260.40 24 96 2.3E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS03680 7afb7502d8fc02e032a1ce7ecbd34218 360 SMART SM00530 30 91 0.0031 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VCLMA_RS03680 7afb7502d8fc02e032a1ce7ecbd34218 360 SUPERFAMILY SSF47413 26 96 1.13E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS03680 7afb7502d8fc02e032a1ce7ecbd34218 360 PANTHER PTHR34475:SF1 14 360 6.4E-56 T 22-04-2016 VCLMA_RS03680 7afb7502d8fc02e032a1ce7ecbd34218 360 Pfam PF13413 Helix-turn-helix domain 31 90 7.0E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS11985 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11985 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11985 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 8.8E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11985 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11985 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11985 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 22-04-2016 VCLMA_RS11985 756d9a7dbdd6c76983597e7873ac5986 37 PANTHER PTHR18804 1 37 3.4E-18 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS09305 e0bf40d09078a9348cd0881f27e3150c 316 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 316 7.3E-145 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VCLMA_RS09305 e0bf40d09078a9348cd0881f27e3150c 316 Gene3D G3DSA:3.40.47.10 1 160 6.7E-67 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09305 e0bf40d09078a9348cd0881f27e3150c 316 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.4E-31 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VCLMA_RS09305 e0bf40d09078a9348cd0881f27e3150c 316 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 316 71.995 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VCLMA_RS09305 e0bf40d09078a9348cd0881f27e3150c 316 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 227 315 5.5E-34 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 VCLMA_RS09305 e0bf40d09078a9348cd0881f27e3150c 316 SUPERFAMILY SSF53901 3 315 2.03E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09305 e0bf40d09078a9348cd0881f27e3150c 316 Gene3D G3DSA:3.40.47.10 161 315 4.9E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 VCLMA_RS09305 e0bf40d09078a9348cd0881f27e3150c 316 PANTHER PTHR18919:SF109 26 316 4.2E-130 T 22-04-2016 VCLMA_RS09305 e0bf40d09078a9348cd0881f27e3150c 316 PANTHER PTHR18919 26 316 4.2E-130 T 22-04-2016 VCLMA_RS00730 1d108e46cb2382293727ec4648742fee 224 Pfam PF00005 ABC transporter 18 165 6.5E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS00730 1d108e46cb2382293727ec4648742fee 224 SUPERFAMILY SSF52540 1 220 4.26E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00730 1d108e46cb2382293727ec4648742fee 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 1.1E-90 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VCLMA_RS00730 1d108e46cb2382293727ec4648742fee 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS00730 1d108e46cb2382293727ec4648742fee 224 SMART SM00382 27 215 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS00730 1d108e46cb2382293727ec4648742fee 224 PANTHER PTHR24220:SF470 3 218 9.2E-119 T 22-04-2016 VCLMA_RS00730 1d108e46cb2382293727ec4648742fee 224 Gene3D G3DSA:3.40.50.300 1 201 7.6E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00730 1d108e46cb2382293727ec4648742fee 224 PANTHER PTHR24220 3 218 9.2E-119 T 22-04-2016 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PANTHER PTHR11444 3 456 3.7E-238 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.188 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 Pfam PF00206 Lyase 6 301 2.0E-91 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 3.9E-202 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 Gene3D G3DSA:1.10.275.10 1 107 4.5E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 Gene3D G3DSA:1.10.40.30 375 432 3.9E-30 T 22-04-2016 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 Gene3D G3DSA:1.20.200.10 108 374 1.6E-101 T 22-04-2016 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 3.6E-28 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 3.6E-28 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 3.6E-28 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 3.6E-28 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 SUPERFAMILY SSF48557 3 455 1.88E-141 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PANTHER PTHR11444:SF3 3 456 3.7E-238 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 3.8E-24 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 9.2E-68 T 22-04-2016 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 9.2E-68 T 22-04-2016 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 9.2E-68 T 22-04-2016 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 9.2E-68 T 22-04-2016 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 9.2E-68 T 22-04-2016 VCLMA_RS12305 278e080f2e12ad8dc0dcdb166d432414 458 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 9.2E-68 T 22-04-2016 VCLMA_RS01375 f3ac1fc4549fda7334e7cd0e990bd83b 458 Pfam PF02447 GntP family permease 13 456 1.5E-117 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VCLMA_RS01375 f3ac1fc4549fda7334e7cd0e990bd83b 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 13 457 2.4E-105 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VCLMA_RS01375 f3ac1fc4549fda7334e7cd0e990bd83b 458 PIRSF PIRSF002746 8 458 2.9E-144 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VCLMA_RS01375 f3ac1fc4549fda7334e7cd0e990bd83b 458 PANTHER PTHR30354 8 458 9.0E-275 T 22-04-2016 VCLMA_RS01375 f3ac1fc4549fda7334e7cd0e990bd83b 458 PANTHER PTHR30354:SF2 8 458 9.0E-275 T 22-04-2016 VCLMA_RS07385 16d37bdebaf0b242f4f1dc6f51a8bcf0 406 Pfam PF00990 Diguanylate cyclase, GGDEF domain 244 387 1.5E-35 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS07385 16d37bdebaf0b242f4f1dc6f51a8bcf0 406 PANTHER PTHR10799:SF706 150 389 6.9E-21 T 22-04-2016 VCLMA_RS07385 16d37bdebaf0b242f4f1dc6f51a8bcf0 406 Gene3D G3DSA:3.30.70.270 245 393 4.3E-42 T 22-04-2016 VCLMA_RS07385 16d37bdebaf0b242f4f1dc6f51a8bcf0 406 SUPERFAMILY SSF55073 248 390 9.42E-38 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS07385 16d37bdebaf0b242f4f1dc6f51a8bcf0 406 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 241 389 1.0E-36 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS07385 16d37bdebaf0b242f4f1dc6f51a8bcf0 406 PANTHER PTHR10799 150 389 6.9E-21 T 22-04-2016 VCLMA_RS07385 16d37bdebaf0b242f4f1dc6f51a8bcf0 406 SMART SM00267 234 391 1.4E-38 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS08720 79a587c6982f7e0201aa5b10a305b02c 383 Gene3D G3DSA:3.40.50.10770 1 140 3.7E-63 T 22-04-2016 VCLMA_RS08720 79a587c6982f7e0201aa5b10a305b02c 383 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 1.8E-164 T 22-04-2016 IPR015093 Protein of unknown function DUF1887 VCLMA_RS08720 79a587c6982f7e0201aa5b10a305b02c 383 Gene3D G3DSA:1.10.10.680 162 240 3.1E-52 T 22-04-2016 VCLMA_RS08720 79a587c6982f7e0201aa5b10a305b02c 383 SUPERFAMILY SSF52980 1 382 2.32E-121 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VCLMA_RS08720 79a587c6982f7e0201aa5b10a305b02c 383 Gene3D G3DSA:3.40.1350.10 241 382 1.4E-59 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VCLMA_RS09960 95950b6d27b2e5664120299558c41624 354 PANTHER PTHR21716 7 351 5.5E-156 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VCLMA_RS09960 95950b6d27b2e5664120299558c41624 354 PANTHER PTHR21716:SF19 7 351 5.5E-156 T 22-04-2016 VCLMA_RS09960 95950b6d27b2e5664120299558c41624 354 Pfam PF01594 Domain of unknown function DUF20 20 345 1.9E-79 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VCLMA_RS03430 a70916e3f52be44f9a40c292ee331f9c 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 2.5E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VCLMA_RS03430 a70916e3f52be44f9a40c292ee331f9c 108 SUPERFAMILY SSF69754 1 104 8.63E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VCLMA_RS03430 a70916e3f52be44f9a40c292ee331f9c 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 5.2E-22 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VCLMA_RS03430 a70916e3f52be44f9a40c292ee331f9c 108 PANTHER PTHR33231 1 108 1.7E-54 T 22-04-2016 VCLMA_RS03430 a70916e3f52be44f9a40c292ee331f9c 108 Gene3D G3DSA:3.30.160.100 2 92 1.0E-29 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 VCLMA_RS03430 a70916e3f52be44f9a40c292ee331f9c 108 PANTHER PTHR33231:SF3 1 108 1.7E-54 T 22-04-2016 VCLMA_RS05355 3e8507a2776ae4050da9cb15e196d9f2 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.537 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VCLMA_RS05355 3e8507a2776ae4050da9cb15e196d9f2 257 Pfam PF00977 Histidine biosynthesis protein 5 239 1.0E-77 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VCLMA_RS05355 3e8507a2776ae4050da9cb15e196d9f2 257 SUPERFAMILY SSF51366 1 256 9.42E-74 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VCLMA_RS05355 3e8507a2776ae4050da9cb15e196d9f2 257 PANTHER PTHR21235 1 257 1.8E-118 T 22-04-2016 VCLMA_RS05355 3e8507a2776ae4050da9cb15e196d9f2 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 9.7E-115 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 VCLMA_RS05355 3e8507a2776ae4050da9cb15e196d9f2 257 PANTHER PTHR21235:SF2 1 257 1.8E-118 T 22-04-2016 VCLMA_RS05355 3e8507a2776ae4050da9cb15e196d9f2 257 Gene3D G3DSA:3.20.20.70 4 256 1.3E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS07190 a730928b658d80b0759f7f2b33de624d 293 Gene3D G3DSA:1.10.3720.10 61 290 7.8E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07190 a730928b658d80b0759f7f2b33de624d 293 PANTHER PTHR32243:SF13 4 292 1.3E-106 T 22-04-2016 VCLMA_RS07190 a730928b658d80b0759f7f2b33de624d 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 129 288 3.5E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS07190 a730928b658d80b0759f7f2b33de624d 293 PANTHER PTHR32243 4 292 1.3E-106 T 22-04-2016 VCLMA_RS07190 a730928b658d80b0759f7f2b33de624d 293 SUPERFAMILY SSF161098 55 282 2.49E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 136 151 2.2E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 36 51 2.2E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 62 74 2.2E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 Gene3D G3DSA:2.40.100.10 21 181 3.6E-49 T 22-04-2016 IPR029000 Cyclophilin-like domain VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 57 74 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 SUPERFAMILY SSF50891 19 180 6.28E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 PANTHER PTHR11071:SF265 24 175 1.5E-55 T 22-04-2016 VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 PANTHER PTHR11071 24 175 1.5E-55 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 23 179 3.5E-42 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 VCLMA_RS10680 c380823eb905722fdca5fc10199c0323 182 PIRSF PIRSF001467 7 180 1.5E-22 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 SUPERFAMILY SSF90123 7 322 1.03E-36 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 SUPERFAMILY SSF52540 333 571 2.21E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 Gene3D G3DSA:3.40.50.300 339 567 2.4E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 PANTHER PTHR24222:SF30 1 573 4.9E-256 T 22-04-2016 VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 Gene3D G3DSA:1.20.1560.10 8 322 7.3E-28 T 22-04-2016 VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 2.4E-138 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 Pfam PF00664 ABC transporter transmembrane region 26 287 3.3E-6 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 SMART SM00382 365 555 3.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 Pfam PF00005 ABC transporter 357 502 1.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS05555 ea5992fea8039ed95cd4d0aa8628e8b3 573 PANTHER PTHR24222 1 573 4.9E-256 T 22-04-2016 VCLMA_RS05545 5d97200789050063746d3c17eea29f92 206 Pfam PF01300 Telomere recombination 23 198 4.5E-45 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VCLMA_RS05545 5d97200789050063746d3c17eea29f92 206 PANTHER PTHR17490:SF7 1 205 4.3E-98 T 22-04-2016 VCLMA_RS05545 5d97200789050063746d3c17eea29f92 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.4E-71 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 VCLMA_RS05545 5d97200789050063746d3c17eea29f92 206 PANTHER PTHR17490 1 205 4.3E-98 T 22-04-2016 VCLMA_RS05545 5d97200789050063746d3c17eea29f92 206 Gene3D G3DSA:3.90.870.10 2 202 8.8E-64 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VCLMA_RS05545 5d97200789050063746d3c17eea29f92 206 SUPERFAMILY SSF55821 1 203 1.13E-64 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain VCLMA_RS05860 6674e957c23cd776571241b085ba52b7 342 SUPERFAMILY SSF53187 9 329 2.91E-79 T 22-04-2016 VCLMA_RS05860 6674e957c23cd776571241b085ba52b7 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 134.154 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VCLMA_RS05860 6674e957c23cd776571241b085ba52b7 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 53 330 1.1E-75 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 VCLMA_RS05860 6674e957c23cd776571241b085ba52b7 342 PIRSF PIRSF017020 4 336 6.5E-120 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 VCLMA_RS05860 6674e957c23cd776571241b085ba52b7 342 Gene3D G3DSA:3.40.630.10 27 233 5.2E-11 T 22-04-2016 VCLMA_RS05860 6674e957c23cd776571241b085ba52b7 342 PANTHER PTHR15162 1 334 2.4E-91 T 22-04-2016 VCLMA_RS06805 26e98f62c14911427f46818094640fb4 328 SMART SM01204 160 308 1.9E-30 T 22-04-2016 IPR019494 FIST, C-domain VCLMA_RS06805 26e98f62c14911427f46818094640fb4 328 Pfam PF08495 FIST N domain 7 158 2.7E-17 T 22-04-2016 IPR013702 FIST domain, N-terminal VCLMA_RS06805 26e98f62c14911427f46818094640fb4 328 PANTHER PTHR40252:SF2 1 327 4.8E-180 T 22-04-2016 VCLMA_RS06805 26e98f62c14911427f46818094640fb4 328 SMART SM00897 2 159 1.2E-17 T 22-04-2016 IPR013702 FIST domain, N-terminal VCLMA_RS06805 26e98f62c14911427f46818094640fb4 328 PANTHER PTHR40252 1 327 4.8E-180 T 22-04-2016 VCLMA_RS06805 26e98f62c14911427f46818094640fb4 328 Pfam PF10442 FIST C domain 163 307 9.0E-17 T 22-04-2016 IPR019494 FIST, C-domain VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 SUPERFAMILY SSF51905 3 103 5.11E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 SUPERFAMILY SSF51905 220 347 5.11E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 1.8E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 Gene3D G3DSA:3.50.50.60 3 179 3.5E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 Gene3D G3DSA:3.50.50.60 180 342 2.2E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.0E-6 T 22-04-2016 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.0E-6 T 22-04-2016 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.0E-6 T 22-04-2016 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 PANTHER PTHR22912 2 187 3.0E-24 T 22-04-2016 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 PANTHER PTHR22912 203 343 3.0E-24 T 22-04-2016 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 4.6E-12 T 22-04-2016 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 4.6E-12 T 22-04-2016 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 4.6E-12 T 22-04-2016 VCLMA_RS08680 3c8efbea0a1f401f25106ee1ed56df7d 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.6E-12 T 22-04-2016 VCLMA_RS06670 e10e66b3354999b886cb36771bdcb66e 172 PANTHER PTHR34319 1 172 1.0E-78 T 22-04-2016 VCLMA_RS06670 e10e66b3354999b886cb36771bdcb66e 172 SUPERFAMILY SSF141452 3 168 2.35E-40 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp VCLMA_RS06670 e10e66b3354999b886cb36771bdcb66e 172 Gene3D G3DSA:2.30.110.20 1 166 6.4E-35 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp VCLMA_RS06670 e10e66b3354999b886cb36771bdcb66e 172 Pfam PF05638 Type VI secretion system effector, Hcp 6 155 4.7E-34 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp VCLMA_RS06670 e10e66b3354999b886cb36771bdcb66e 172 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 168 4.9E-65 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp VCLMA_RS09310 fc2eee6ec15d10d584ce480027c565b5 341 PANTHER PTHR30100:SF1 2 341 2.9E-133 T 22-04-2016 VCLMA_RS09310 fc2eee6ec15d10d584ce480027c565b5 341 PIRSF PIRSF002465 2 339 7.4E-126 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VCLMA_RS09310 fc2eee6ec15d10d584ce480027c565b5 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 3.4E-106 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VCLMA_RS09310 fc2eee6ec15d10d584ce480027c565b5 341 Pfam PF02504 Fatty acid synthesis protein 5 327 8.4E-102 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 VCLMA_RS09310 fc2eee6ec15d10d584ce480027c565b5 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 135.847 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 VCLMA_RS09310 fc2eee6ec15d10d584ce480027c565b5 341 PANTHER PTHR30100 2 341 2.9E-133 T 22-04-2016 VCLMA_RS09310 fc2eee6ec15d10d584ce480027c565b5 341 SUPERFAMILY SSF53659 4 336 1.32E-101 T 22-04-2016 VCLMA_RS09310 fc2eee6ec15d10d584ce480027c565b5 341 Gene3D G3DSA:3.40.718.10 3 335 1.2E-125 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VCLMA_RS06350 7097e50f4c6da9886a7cb6ecaa870017 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 275 3.3E-14 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VCLMA_RS06350 7097e50f4c6da9886a7cb6ecaa870017 357 SUPERFAMILY SSF54593 5 341 3.33E-77 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCLMA_RS06350 7097e50f4c6da9886a7cb6ecaa870017 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 1.5E-134 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VCLMA_RS06350 7097e50f4c6da9886a7cb6ecaa870017 357 PANTHER PTHR11959:SF1 1 355 1.2E-148 T 22-04-2016 VCLMA_RS06350 7097e50f4c6da9886a7cb6ecaa870017 357 Gene3D G3DSA:3.10.180.10 5 146 1.6E-44 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCLMA_RS06350 7097e50f4c6da9886a7cb6ecaa870017 357 Gene3D G3DSA:3.10.180.10 159 354 4.3E-72 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VCLMA_RS06350 7097e50f4c6da9886a7cb6ecaa870017 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 2.0E-56 T 22-04-2016 VCLMA_RS06350 7097e50f4c6da9886a7cb6ecaa870017 357 PIRSF PIRSF009283 1 355 4.7E-125 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VCLMA_RS06350 7097e50f4c6da9886a7cb6ecaa870017 357 PANTHER PTHR11959 1 355 1.2E-148 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 PANTHER PTHR30126 3 290 5.0E-206 T 22-04-2016 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 Gene3D G3DSA:1.10.10.10 2 81 1.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 Gene3D G3DSA:3.40.190.10 198 257 1.3E-6 T 22-04-2016 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 Gene3D G3DSA:3.40.190.10 94 197 3.3E-8 T 22-04-2016 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 PANTHER PTHR30126:SF23 3 290 5.0E-206 T 22-04-2016 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.3E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 SUPERFAMILY SSF46785 1 85 8.62E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 SUPERFAMILY SSF53850 94 289 4.71E-22 T 22-04-2016 VCLMA_RS07325 82408f127865666e93f6a2a6b883ab45 290 Pfam PF03466 LysR substrate binding domain 95 287 1.6E-18 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS03345 b463173fbe2b33346d334b1762fc0679 494 Pfam PF02554 Carbon starvation protein CstA 5 144 6.0E-33 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VCLMA_RS03345 b463173fbe2b33346d334b1762fc0679 494 Pfam PF02554 Carbon starvation protein CstA 146 294 5.9E-20 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VCLMA_RS03345 b463173fbe2b33346d334b1762fc0679 494 PANTHER PTHR30252:SF0 1 492 1.5E-182 T 22-04-2016 VCLMA_RS03345 b463173fbe2b33346d334b1762fc0679 494 PANTHER PTHR30252 1 492 1.5E-182 T 22-04-2016 VCLMA_RS03345 b463173fbe2b33346d334b1762fc0679 494 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 327 436 1.8E-21 T 22-04-2016 IPR025299 CstA, C-terminal domain VCLMA_RS07175 16b0135ff9f722e7824133d1972be41d 457 PANTHER PTHR30625:SF0 15 444 1.0E-224 T 22-04-2016 VCLMA_RS07175 16b0135ff9f722e7824133d1972be41d 457 PANTHER PTHR30625 15 444 1.0E-224 T 22-04-2016 VCLMA_RS07175 16b0135ff9f722e7824133d1972be41d 457 Pfam PF01618 MotA/TolQ/ExbB proton channel family 310 429 4.2E-30 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VCLMA_RS07175 16b0135ff9f722e7824133d1972be41d 457 PIRSF PIRSF037714 1 455 9.3E-165 T 22-04-2016 IPR017270 Putative MotA/TolQ/ExbB family protein VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 SUPERFAMILY SSF52540 115 381 1.28E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799:SF610 405 698 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799:SF610 896 972 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799:SF610 150 357 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799:SF610 803 844 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799:SF610 1 9 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 970 71.263 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 SUPERFAMILY SSF52540 273 340 1.52E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 SMART SM00490 522 606 1.7E-17 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799 405 698 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799 896 972 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799 150 357 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799 803 844 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 PANTHER PTHR10799 1 9 3.7E-258 T 22-04-2016 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 Pfam PF00271 Helicase conserved C-terminal domain 497 606 2.0E-15 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 Gene3D G3DSA:3.40.50.300 489 618 9.6E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 Pfam PF12137 RNA polymerase recycling family C-terminal 610 969 2.7E-145 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 Pfam PF00176 SNF2 family N-terminal domain 174 347 2.4E-14 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 SUPERFAMILY SSF52540 485 650 1.52E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 Gene3D G3DSA:3.40.50.300 164 321 3.9E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11655 b57e619bfe6e4ee6b25f8925bc78f715 972 SMART SM00487 150 345 1.5E-13 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS11940 2427d7a2a2fb3ecf1b645af3a5b8ed57 297 PANTHER PTHR22911 1 297 2.9E-127 T 22-04-2016 VCLMA_RS11940 2427d7a2a2fb3ecf1b645af3a5b8ed57 297 SUPERFAMILY SSF103481 178 269 9.81E-11 T 22-04-2016 VCLMA_RS11940 2427d7a2a2fb3ecf1b645af3a5b8ed57 297 SUPERFAMILY SSF103481 42 141 3.92E-14 T 22-04-2016 VCLMA_RS11940 2427d7a2a2fb3ecf1b645af3a5b8ed57 297 PANTHER PTHR22911:SF70 1 297 2.9E-127 T 22-04-2016 VCLMA_RS11940 2427d7a2a2fb3ecf1b645af3a5b8ed57 297 Pfam PF00892 EamA-like transporter family 7 137 1.1E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS11940 2427d7a2a2fb3ecf1b645af3a5b8ed57 297 Pfam PF00892 EamA-like transporter family 143 268 7.0E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 76 3.5E-30 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 76 14.039 T 22-04-2016 VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 PANTHER PTHR10031 8 77 1.5E-18 T 22-04-2016 VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.8E-6 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.8E-6 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.8E-6 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 Gene3D G3DSA:1.20.20.10 2 78 2.5E-32 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 SUPERFAMILY SSF81333 3 78 3.4E-19 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VCLMA_RS12970 7b6f2e465d7808c2a771ecd3991fb9b4 85 Pfam PF00137 ATP synthase subunit C 10 72 2.5E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VCLMA_RS04035 a93331128fc1c01be9ed21cf09085639 137 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 8.3E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS04035 a93331128fc1c01be9ed21cf09085639 137 Pfam PF13633 Prokaryotic N-terminal methylation site 5 31 3.1E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS03165 24ab53eef124e4be58b87076e2fc84c6 303 PIRSF PIRSF004654 1 294 9.8E-90 T 22-04-2016 IPR023605 Lipoprotein NlpI VCLMA_RS03165 24ab53eef124e4be58b87076e2fc84c6 303 SUPERFAMILY SSF48452 34 286 3.35E-67 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS03165 24ab53eef124e4be58b87076e2fc84c6 303 SMART SM00028 134 167 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS03165 24ab53eef124e4be58b87076e2fc84c6 303 SMART SM00028 237 270 38.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS03165 24ab53eef124e4be58b87076e2fc84c6 303 SMART SM00028 100 133 5.2E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS03165 24ab53eef124e4be58b87076e2fc84c6 303 SMART SM00028 66 99 0.78 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS03165 24ab53eef124e4be58b87076e2fc84c6 303 PANTHER PTHR23083 237 303 1.2E-21 T 22-04-2016 VCLMA_RS03165 24ab53eef124e4be58b87076e2fc84c6 303 PANTHER PTHR23083 63 167 1.2E-21 T 22-04-2016 VCLMA_RS03165 24ab53eef124e4be58b87076e2fc84c6 303 Gene3D G3DSA:1.25.40.10 51 296 4.3E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS07920 590c891e25366a1b201d1665ff02e743 181 Pfam PF04279 Intracellular septation protein A 1 174 1.9E-68 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VCLMA_RS07920 590c891e25366a1b201d1665ff02e743 181 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.484 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VCLMA_RS07920 590c891e25366a1b201d1665ff02e743 181 PANTHER PTHR36917:SF1 1 181 1.3E-75 T 22-04-2016 VCLMA_RS07920 590c891e25366a1b201d1665ff02e743 181 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 175 1.1E-63 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 VCLMA_RS07920 590c891e25366a1b201d1665ff02e743 181 PANTHER PTHR36917 1 181 1.3E-75 T 22-04-2016 VCLMA_RS03355 6494e2cd9641afc94b959c4455e33435 307 Gene3D G3DSA:3.40.50.10490 11 256 6.5E-91 T 22-04-2016 VCLMA_RS03355 6494e2cd9641afc94b959c4455e33435 307 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 9 302 43.986 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VCLMA_RS03355 6494e2cd9641afc94b959c4455e33435 307 PANTHER PTHR10088 1 307 7.5E-217 T 22-04-2016 VCLMA_RS03355 6494e2cd9641afc94b959c4455e33435 307 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 13 303 1.8E-131 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VCLMA_RS03355 6494e2cd9641afc94b959c4455e33435 307 SUPERFAMILY SSF53697 12 255 3.11E-74 T 22-04-2016 VCLMA_RS03355 6494e2cd9641afc94b959c4455e33435 307 PANTHER PTHR10088:SF5 1 307 7.5E-217 T 22-04-2016 VCLMA_RS03355 6494e2cd9641afc94b959c4455e33435 307 Pfam PF13580 SIS domain 50 172 2.0E-12 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 VCLMA_RS03355 6494e2cd9641afc94b959c4455e33435 307 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 192 209 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 VCLMA_RS10390 ea54871d02a8f5763f48bbb329afac18 281 SUPERFAMILY SSF56219 59 275 1.57E-26 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS10390 ea54871d02a8f5763f48bbb329afac18 281 Gene3D G3DSA:3.60.10.10 60 238 7.8E-8 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS10390 ea54871d02a8f5763f48bbb329afac18 281 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 270 2.7E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase VCLMA_RS10390 ea54871d02a8f5763f48bbb329afac18 281 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 278 58.774 T 22-04-2016 IPR022958 Uncharacterised protein family UPF0294 VCLMA_RS08570 82880b5ea44e82ef53314c09d1b0108a 328 Gene3D G3DSA:2.40.128.140 9 324 6.3E-103 T 22-04-2016 VCLMA_RS08570 82880b5ea44e82ef53314c09d1b0108a 328 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 28 325 2.6E-85 T 22-04-2016 IPR018707 Protein of unknown function DUF2219 VCLMA_RS08555 e5a84fe32d0d600c8e1fc18961012841 256 PANTHER PTHR24220 8 255 3.1E-170 T 22-04-2016 VCLMA_RS08555 e5a84fe32d0d600c8e1fc18961012841 256 SMART SM00382 31 229 2.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS08555 e5a84fe32d0d600c8e1fc18961012841 256 Gene3D G3DSA:3.40.50.300 6 253 2.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08555 e5a84fe32d0d600c8e1fc18961012841 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS08555 e5a84fe32d0d600c8e1fc18961012841 256 PIRSF PIRSF039085 3 256 1.1E-120 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VCLMA_RS08555 e5a84fe32d0d600c8e1fc18961012841 256 SUPERFAMILY SSF52540 7 251 5.83E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08555 e5a84fe32d0d600c8e1fc18961012841 256 Pfam PF00005 ABC transporter 22 181 4.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS08555 e5a84fe32d0d600c8e1fc18961012841 256 PANTHER PTHR24220:SF472 8 255 3.1E-170 T 22-04-2016 VCLMA_RS01120 5085dd10c0056b81968712b2bc902a7e 426 SUPERFAMILY SSF53756 53 405 2.72E-12 T 22-04-2016 VCLMA_RS01120 5085dd10c0056b81968712b2bc902a7e 426 PANTHER PTHR23417:SF2 1 112 8.3E-129 T 22-04-2016 VCLMA_RS01120 5085dd10c0056b81968712b2bc902a7e 426 PANTHER PTHR23417:SF2 191 418 8.3E-129 T 22-04-2016 VCLMA_RS01120 5085dd10c0056b81968712b2bc902a7e 426 PANTHER PTHR23417:SF2 131 141 8.3E-129 T 22-04-2016 VCLMA_RS01120 5085dd10c0056b81968712b2bc902a7e 426 Pfam PF00534 Glycosyl transferases group 1 236 400 5.7E-7 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VCLMA_RS01120 5085dd10c0056b81968712b2bc902a7e 426 PANTHER PTHR23417 1 112 8.3E-129 T 22-04-2016 VCLMA_RS01120 5085dd10c0056b81968712b2bc902a7e 426 PANTHER PTHR23417 191 418 8.3E-129 T 22-04-2016 VCLMA_RS01120 5085dd10c0056b81968712b2bc902a7e 426 PANTHER PTHR23417 131 141 8.3E-129 T 22-04-2016 VCLMA_RS01120 5085dd10c0056b81968712b2bc902a7e 426 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 212 3.2E-63 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 VCLMA_RS11135 a3f7854b2ea3cce41608e90691b5b1c2 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11135 a3f7854b2ea3cce41608e90691b5b1c2 360 PANTHER PTHR22926 2 360 1.1E-191 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11135 a3f7854b2ea3cce41608e90691b5b1c2 360 PANTHER PTHR22926:SF5 2 360 1.1E-191 T 22-04-2016 VCLMA_RS11135 a3f7854b2ea3cce41608e90691b5b1c2 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 6.7E-156 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11135 a3f7854b2ea3cce41608e90691b5b1c2 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 6.3E-6 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11135 a3f7854b2ea3cce41608e90691b5b1c2 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.293 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11135 a3f7854b2ea3cce41608e90691b5b1c2 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS11135 a3f7854b2ea3cce41608e90691b5b1c2 360 Pfam PF00953 Glycosyl transferase family 4 99 283 6.5E-37 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 SUPERFAMILY SSF51366 272 467 2.51E-54 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 PANTHER PTHR22854 2 297 1.8E-144 T 22-04-2016 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 273 465 1.1E-53 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 Gene3D G3DSA:3.20.20.70 17 274 1.4E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 PANTHER PTHR22854:SF2 2 297 1.8E-144 T 22-04-2016 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 Gene3D G3DSA:3.20.20.70 275 463 1.2E-60 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 65 83 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 273 469 29.871 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 18 269 35.503 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 SUPERFAMILY SSF51366 26 269 5.3E-82 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VCLMA_RS05515 98fab921a4872259dfb70d4a87fd5503 469 Pfam PF00218 Indole-3-glycerol phosphate synthase 21 266 9.7E-97 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 VCLMA_RS02330 073858c4b84b395df958979995379931 236 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 2.9E-34 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 VCLMA_RS02330 073858c4b84b395df958979995379931 236 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VCLMA_RS02330 073858c4b84b395df958979995379931 236 Gene3D G3DSA:3.20.20.10 2 234 6.6E-93 T 22-04-2016 IPR029066 PLP-binding barrel VCLMA_RS02330 073858c4b84b395df958979995379931 236 SUPERFAMILY SSF51419 1 228 8.51E-82 T 22-04-2016 IPR029066 PLP-binding barrel VCLMA_RS02330 073858c4b84b395df958979995379931 236 PANTHER PTHR10146 1 234 1.4E-107 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VCLMA_RS02330 073858c4b84b395df958979995379931 236 PIRSF PIRSF004848 1 236 1.6E-77 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VCLMA_RS02330 073858c4b84b395df958979995379931 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 230 4.8E-86 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 VCLMA_RS11155 f8b6a87fc61165d5579bf12d0f9d89eb 106 PANTHER PTHR37479:SF1 1 106 3.6E-41 T 22-04-2016 VCLMA_RS11155 f8b6a87fc61165d5579bf12d0f9d89eb 106 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 21 104 6.8E-30 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VCLMA_RS11155 f8b6a87fc61165d5579bf12d0f9d89eb 106 PANTHER PTHR37479 1 106 3.6E-41 T 22-04-2016 VCLMA_RS11155 f8b6a87fc61165d5579bf12d0f9d89eb 106 Pfam PF04999 Cell division protein FtsL 9 104 1.8E-35 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VCLMA_RS11155 f8b6a87fc61165d5579bf12d0f9d89eb 106 Hamap MF_00910 Cell division protein FtsL [ftsL]. 20 103 16.01 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 VCLMA_RS11475 b00642f554466bf5e6965f9e3cb57a77 191 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 189 35.606 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VCLMA_RS11475 b00642f554466bf5e6965f9e3cb57a77 191 PANTHER PTHR37528 1 191 1.7E-51 T 22-04-2016 VCLMA_RS11475 b00642f554466bf5e6965f9e3cb57a77 191 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 21 176 2.9E-11 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VCLMA_RS11475 b00642f554466bf5e6965f9e3cb57a77 191 SUPERFAMILY SSF101327 7 178 7.19E-42 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VCLMA_RS11475 b00642f554466bf5e6965f9e3cb57a77 191 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 179 7.2E-35 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VCLMA_RS11720 0e9eaaaae1f70bbf4d87e3817e5ee59f 263 PANTHER PTHR30188 1 263 1.0E-125 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VCLMA_RS11720 0e9eaaaae1f70bbf4d87e3817e5ee59f 263 PANTHER PTHR30188:SF4 1 263 1.0E-125 T 22-04-2016 VCLMA_RS11720 0e9eaaaae1f70bbf4d87e3817e5ee59f 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 10 261 7.3E-99 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VCLMA_RS11720 0e9eaaaae1f70bbf4d87e3817e5ee59f 263 Pfam PF02405 Permease MlaE 47 259 2.0E-75 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 SUPERFAMILY SSF55486 1 493 4.76E-121 T 22-04-2016 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PANTHER PTHR34217:SF1 1 494 2.6E-262 T 22-04-2016 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 10 492 3.2E-93 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 6.0E-47 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 6.0E-47 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 6.0E-47 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 6.0E-47 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 6.0E-47 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 6.0E-47 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 6.0E-47 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PIRSF PIRSF006615 1 494 5.3E-198 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 VCLMA_RS06665 5037eb2187e7467f7f0c8967962d57b1 494 PANTHER PTHR34217 1 494 2.6E-262 T 22-04-2016 VCLMA_RS02275 388a10e496a968f635562a8ed77fde6e 375 PANTHER PTHR21666 190 374 5.5E-51 T 22-04-2016 VCLMA_RS02275 388a10e496a968f635562a8ed77fde6e 375 Pfam PF11873 Domain of unknown function (DUF3393) 4 206 8.9E-76 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal VCLMA_RS02275 388a10e496a968f635562a8ed77fde6e 375 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VCLMA_RS02275 388a10e496a968f635562a8ed77fde6e 375 PANTHER PTHR21666:SF224 190 374 5.5E-51 T 22-04-2016 VCLMA_RS02275 388a10e496a968f635562a8ed77fde6e 375 Pfam PF01464 Transglycosylase SLT domain 211 334 1.4E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VCLMA_RS02275 388a10e496a968f635562a8ed77fde6e 375 SUPERFAMILY SSF53955 206 370 1.78E-35 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS02275 388a10e496a968f635562a8ed77fde6e 375 Gene3D G3DSA:1.10.530.10 181 373 4.1E-42 T 22-04-2016 VCLMA_RS11945 686d12f5fb7551324540d57b2ba3bb5c 188 Gene3D G3DSA:3.10.350.10 106 152 0.001 T 22-04-2016 IPR018392 LysM domain VCLMA_RS11945 686d12f5fb7551324540d57b2ba3bb5c 188 Pfam PF08525 Opacity-associated protein A N-terminal motif 36 62 8.5E-8 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal VCLMA_RS11945 686d12f5fb7551324540d57b2ba3bb5c 188 Pfam PF04225 Opacity-associated protein A LysM-like domain 104 188 8.8E-39 T 22-04-2016 IPR007340 Opacity-associated protein A VCLMA_RS00750 bda9be44feb0f89031294fa4f6216283 213 SUPERFAMILY SSF46689 7 80 3.83E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS00750 bda9be44feb0f89031294fa4f6216283 213 PANTHER PTHR30055 1 206 1.6E-106 T 22-04-2016 VCLMA_RS00750 bda9be44feb0f89031294fa4f6216283 213 Gene3D G3DSA:1.10.357.10 7 195 1.9E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS00750 bda9be44feb0f89031294fa4f6216283 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 61 1.4E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS00750 bda9be44feb0f89031294fa4f6216283 213 PANTHER PTHR30055:SF39 1 206 1.6E-106 T 22-04-2016 VCLMA_RS00750 bda9be44feb0f89031294fa4f6216283 213 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VCLMA_RS03940 cdc50d3e964731ab0ea51ed2866edb88 155 Pfam PF01381 Helix-turn-helix 83 129 3.0E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VCLMA_RS03940 cdc50d3e964731ab0ea51ed2866edb88 155 SMART SM00530 82 138 0.0028 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VCLMA_RS03940 cdc50d3e964731ab0ea51ed2866edb88 155 SUPERFAMILY SSF47413 79 139 5.18E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS03940 cdc50d3e964731ab0ea51ed2866edb88 155 Gene3D G3DSA:1.10.260.40 80 142 4.2E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 PIRSF PIRSF000456 4 262 3.8E-108 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 PANTHER PTHR23416 1 254 3.4E-142 T 22-04-2016 VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 PANTHER PTHR23416:SF8 1 254 3.4E-142 T 22-04-2016 VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 SUPERFAMILY SSF51161 1 262 3.49E-82 T 22-04-2016 IPR011004 Trimeric LpxA-like VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 Gene3D G3DSA:2.160.10.10 3 194 3.5E-49 T 22-04-2016 VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.29 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.0E-31 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 Gene3D G3DSA:1.20.1180.10 197 262 4.0E-28 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 32 1.3E-6 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 1.6E-8 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS10435 122be3e870d4c527d83702e86de16307 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 7.5E-110 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 VCLMA_RS09975 83a8211ef49fdbdbadc4f2f7c97af1a2 116 SUPERFAMILY SSF52833 2 116 8.68E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS09975 83a8211ef49fdbdbadc4f2f7c97af1a2 116 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 116 3.3E-45 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VCLMA_RS09975 83a8211ef49fdbdbadc4f2f7c97af1a2 116 PANTHER PTHR30041:SF4 1 116 7.5E-70 T 22-04-2016 VCLMA_RS09975 83a8211ef49fdbdbadc4f2f7c97af1a2 116 Gene3D G3DSA:3.40.30.10 1 116 1.6E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS09975 83a8211ef49fdbdbadc4f2f7c97af1a2 116 Pfam PF03960 ArsC family 6 115 1.6E-21 T 22-04-2016 IPR006660 Arsenate reductase-like VCLMA_RS09975 83a8211ef49fdbdbadc4f2f7c97af1a2 116 PANTHER PTHR30041 1 116 7.5E-70 T 22-04-2016 VCLMA_RS04305 ab9dc3e0bc567574e5b5dbcb8c420ef7 356 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 354 6.4E-151 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 VCLMA_RS04305 ab9dc3e0bc567574e5b5dbcb8c420ef7 356 Gene3D G3DSA:3.40.50.2000 1 195 1.7E-76 T 22-04-2016 VCLMA_RS04305 ab9dc3e0bc567574e5b5dbcb8c420ef7 356 Gene3D G3DSA:3.40.50.2000 196 355 4.4E-65 T 22-04-2016 VCLMA_RS04305 ab9dc3e0bc567574e5b5dbcb8c420ef7 356 PANTHER PTHR18964 1 356 5.8E-190 T 22-04-2016 VCLMA_RS04305 ab9dc3e0bc567574e5b5dbcb8c420ef7 356 PANTHER PTHR18964:SF2 1 356 5.8E-190 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 VCLMA_RS04305 ab9dc3e0bc567574e5b5dbcb8c420ef7 356 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 7 354 4.0E-123 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain VCLMA_RS04305 ab9dc3e0bc567574e5b5dbcb8c420ef7 356 SUPERFAMILY SSF53756 1 355 1.37E-128 T 22-04-2016 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 SUPERFAMILY SSF103190 48 187 1.02E-29 T 22-04-2016 IPR029151 Periplasmic sensor domain-like VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 SUPERFAMILY SSF47384 358 439 3.73E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 Gene3D G3DSA:3.30.565.10 427 590 3.0E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 SMART SM00388 373 441 2.1E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 SUPERFAMILY SSF55874 437 590 1.02E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 PANTHER PTHR24423:SF451 81 179 1.8E-198 T 22-04-2016 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 PANTHER PTHR24423:SF451 350 593 1.8E-198 T 22-04-2016 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 PANTHER PTHR24423 81 179 1.8E-198 T 22-04-2016 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 PANTHER PTHR24423 350 593 1.8E-198 T 22-04-2016 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 590 8.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 Gene3D G3DSA:3.30.450.20 113 140 4.3E-5 T 22-04-2016 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 Gene3D G3DSA:1.10.287.130 373 426 3.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 SMART SM00387 484 592 1.6E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 374 438 6.2E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 PIRSF PIRSF036431 1 595 1.8E-187 T 22-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 537 6.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 6.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 551 6.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS08845 eccf645312ab0151d0f5711e906303f7 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 6.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 VCLMA_RS01140 6fbd320fb044623f03e222421c0d33de 399 PANTHER PTHR37422 1 399 3.5E-155 T 22-04-2016 VCLMA_RS01140 6fbd320fb044623f03e222421c0d33de 399 PANTHER PTHR37422:SF2 1 399 3.5E-155 T 22-04-2016 VCLMA_RS01140 6fbd320fb044623f03e222421c0d33de 399 Pfam PF04932 O-Antigen ligase 173 329 2.9E-17 T 22-04-2016 IPR007016 O-antigen ligase-related VCLMA_RS03715 17f7fd5be0776ab3f9814bdea5953516 77 SUPERFAMILY SSF161187 1 69 1.09E-26 T 22-04-2016 IPR029037 YfgJ-like VCLMA_RS03715 17f7fd5be0776ab3f9814bdea5953516 77 Gene3D G3DSA:2.10.290.10 1 70 4.5E-29 T 22-04-2016 IPR029037 YfgJ-like VCLMA_RS03715 17f7fd5be0776ab3f9814bdea5953516 77 Pfam PF07191 zinc-ribbons 4 67 7.0E-27 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 VCLMA_RS03715 17f7fd5be0776ab3f9814bdea5953516 77 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 5 68 1.0E-30 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 VCLMA_RS12485 0004434239f7bfb3ba0c30e9365687ba 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 4.6E-59 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VCLMA_RS12485 0004434239f7bfb3ba0c30e9365687ba 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 8.0E-49 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VCLMA_RS12485 0004434239f7bfb3ba0c30e9365687ba 105 Hamap MF_00744 Met repressor [metJ]. 1 105 35.123 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VCLMA_RS12485 0004434239f7bfb3ba0c30e9365687ba 105 SUPERFAMILY SSF47598 3 104 2.89E-56 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VCLMA_RS12485 0004434239f7bfb3ba0c30e9365687ba 105 Gene3D G3DSA:1.10.140.10 2 104 2.0E-62 T 22-04-2016 IPR023453 Methionine repressor MetJ domain VCLMA_RS02105 819d442beeed14dfdc94d4aa9a0b716e 162 Pfam PF04093 rod shape-determining protein MreD 7 154 5.4E-45 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VCLMA_RS02105 819d442beeed14dfdc94d4aa9a0b716e 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 2.4E-36 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VCLMA_RS02105 819d442beeed14dfdc94d4aa9a0b716e 162 PANTHER PTHR37484 1 162 2.4E-72 T 22-04-2016 VCLMA_RS02105 819d442beeed14dfdc94d4aa9a0b716e 162 PIRSF PIRSF018472 1 162 9.1E-43 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 Gene3D G3DSA:3.30.70.260 796 855 1.0E-7 T 22-04-2016 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 SMART SM00471 447 594 1.3E-10 T 22-04-2016 IPR003607 HD/PDEase domain VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 SUPERFAMILY SSF55021 796 854 1.03E-7 T 22-04-2016 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 SUPERFAMILY SSF55021 689 762 3.02E-7 T 22-04-2016 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 SUPERFAMILY SSF81301 35 172 8.63E-19 T 22-04-2016 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 SUPERFAMILY SSF81593 182 310 1.02E-9 T 22-04-2016 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 SUPERFAMILY SSF109604 418 553 1.1E-14 T 22-04-2016 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 PIRSF PIRSF006288 6 875 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 Gene3D G3DSA:3.30.460.10 71 161 1.4E-8 T 22-04-2016 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 Gene3D G3DSA:1.10.3210.10 421 610 5.0E-27 T 22-04-2016 IPR006674 HD domain VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 PANTHER PTHR13734 95 688 5.2E-153 T 22-04-2016 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 28 869 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 Pfam PF01966 HD domain 451 584 4.4E-14 T 22-04-2016 IPR006674 HD domain VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 Pfam PF01909 Nucleotidyltransferase domain 57 109 1.1E-7 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 876 335.702 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 1.3E-34 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VCLMA_RS10505 d56be25ae61fbca56985b70c125aa63c 876 PANTHER PTHR13734:SF45 95 688 5.2E-153 T 22-04-2016 VCLMA_RS12390 00cc3cc84dc9bb5c4343a26e86896345 340 Pfam PF13353 4Fe-4S single cluster domain 110 183 3.8E-7 T 22-04-2016 VCLMA_RS12390 00cc3cc84dc9bb5c4343a26e86896345 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 1.6E-156 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like VCLMA_RS12390 00cc3cc84dc9bb5c4343a26e86896345 340 Pfam PF04055 Radical SAM superfamily 118 280 3.1E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS12390 00cc3cc84dc9bb5c4343a26e86896345 340 Gene3D G3DSA:3.20.20.70 105 313 1.5E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS12390 00cc3cc84dc9bb5c4343a26e86896345 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 5 328 2.2E-128 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VCLMA_RS12390 00cc3cc84dc9bb5c4343a26e86896345 340 PANTHER PTHR30538 13 337 8.5E-135 T 22-04-2016 VCLMA_RS12390 00cc3cc84dc9bb5c4343a26e86896345 340 PIRSF PIRSF004911 5 340 7.1E-114 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VCLMA_RS12390 00cc3cc84dc9bb5c4343a26e86896345 340 SUPERFAMILY SSF102114 102 324 2.49E-25 T 22-04-2016 VCLMA_RS12390 00cc3cc84dc9bb5c4343a26e86896345 340 PANTHER PTHR30538:SF1 13 337 8.5E-135 T 22-04-2016 VCLMA_RS01100 cbbb98e09283c7d71b39abdba7cfeba6 309 Pfam PF07507 WavE lipopolysaccharide synthesis 9 306 7.7E-116 T 22-04-2016 IPR011122 WavE lipopolysaccharide synthesis VCLMA_RS03795 88d45b832403bb39a08c6df04cd5a200 177 Pfam PF01032 FecCD transport family 1 172 6.8E-35 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS03795 88d45b832403bb39a08c6df04cd5a200 177 Gene3D G3DSA:1.10.3470.10 1 175 1.9E-39 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS03795 88d45b832403bb39a08c6df04cd5a200 177 PANTHER PTHR30472:SF24 1 177 2.8E-88 T 22-04-2016 VCLMA_RS03795 88d45b832403bb39a08c6df04cd5a200 177 SUPERFAMILY SSF81345 2 172 4.97E-32 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS03795 88d45b832403bb39a08c6df04cd5a200 177 PANTHER PTHR30472 1 177 2.8E-88 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS13015 a17b4ee0767af2059069821825752c3a 153 Pfam PF14849 YidC periplasmic domain 31 153 3.3E-32 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VCLMA_RS13015 a17b4ee0767af2059069821825752c3a 153 PRINTS PR00701 60kDa inner membrane protein signature 37 58 2.0E-15 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS13015 a17b4ee0767af2059069821825752c3a 153 PRINTS PR00701 60kDa inner membrane protein signature 127 147 2.0E-15 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 VCLMA_RS13015 a17b4ee0767af2059069821825752c3a 153 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 153 1.1E-38 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal VCLMA_RS03885 ea80b7cd10355ef37181c4927ffc6b73 178 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 9 174 1.2E-63 T 22-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VCLMA_RS03885 ea80b7cd10355ef37181c4927ffc6b73 178 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 9 173 5.9E-56 T 22-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VCLMA_RS03885 ea80b7cd10355ef37181c4927ffc6b73 178 Hamap MF_00398 Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferase [citX]. 4 178 36.027 T 22-04-2016 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 VCLMA_RS03030 6032086bc054d4350607a292159e954d 340 PANTHER PTHR18895 78 336 6.2E-129 T 22-04-2016 VCLMA_RS03030 6032086bc054d4350607a292159e954d 340 Gene3D G3DSA:3.40.50.150 168 337 1.6E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS03030 6032086bc054d4350607a292159e954d 340 Pfam PF05175 Methyltransferase small domain 171 336 3.0E-59 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VCLMA_RS03030 6032086bc054d4350607a292159e954d 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.575 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS03030 6032086bc054d4350607a292159e954d 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 2.1E-55 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS03030 6032086bc054d4350607a292159e954d 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VCLMA_RS03030 6032086bc054d4350607a292159e954d 340 PANTHER PTHR18895:SF70 78 336 6.2E-129 T 22-04-2016 VCLMA_RS03030 6032086bc054d4350607a292159e954d 340 SUPERFAMILY SSF53335 156 336 9.62E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS04105 625a38df16d13a5eb3d8474c0b315dca 231 Gene3D G3DSA:2.40.30.70 3 157 5.7E-50 T 22-04-2016 IPR023370 TsaA-like domain VCLMA_RS04105 625a38df16d13a5eb3d8474c0b315dca 231 PANTHER PTHR12818 1 230 7.2E-132 T 22-04-2016 VCLMA_RS04105 625a38df16d13a5eb3d8474c0b315dca 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 147 2.0E-47 T 22-04-2016 IPR023370 TsaA-like domain VCLMA_RS04105 625a38df16d13a5eb3d8474c0b315dca 231 ProSitePatterns PS01318 TsaA-like domain signature. 85 96 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site VCLMA_RS04105 625a38df16d13a5eb3d8474c0b315dca 231 SUPERFAMILY SSF118196 1 225 3.27E-77 T 22-04-2016 IPR023370 TsaA-like domain VCLMA_RS04105 625a38df16d13a5eb3d8474c0b315dca 231 PANTHER PTHR12818:SF6 1 230 7.2E-132 T 22-04-2016 VCLMA_RS04105 625a38df16d13a5eb3d8474c0b315dca 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.4E-39 T 22-04-2016 IPR023370 TsaA-like domain VCLMA_RS07630 4cbd51a5fa0e98c000662946e9e54511 257 PANTHER PTHR33121:SF15 25 251 4.9E-118 T 22-04-2016 VCLMA_RS07630 4cbd51a5fa0e98c000662946e9e54511 257 Pfam PF00563 EAL domain 25 242 2.9E-46 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07630 4cbd51a5fa0e98c000662946e9e54511 257 Gene3D G3DSA:3.20.20.450 25 242 7.6E-50 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07630 4cbd51a5fa0e98c000662946e9e54511 257 PANTHER PTHR33121 25 251 4.9E-118 T 22-04-2016 VCLMA_RS07630 4cbd51a5fa0e98c000662946e9e54511 257 SUPERFAMILY SSF141868 25 242 8.5E-59 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07630 4cbd51a5fa0e98c000662946e9e54511 257 SMART SM00052 10 247 3.3E-22 T 22-04-2016 IPR001633 EAL domain VCLMA_RS04590 dcb8da4ed21074d23c679bf0e95bd7cd 97 PANTHER PTHR36417:SF1 1 95 8.8E-68 T 22-04-2016 VCLMA_RS04590 dcb8da4ed21074d23c679bf0e95bd7cd 97 PANTHER PTHR36417 1 95 8.8E-68 T 22-04-2016 VCLMA_RS04590 dcb8da4ed21074d23c679bf0e95bd7cd 97 Pfam PF10262 Rdx family 6 78 1.5E-31 T 22-04-2016 IPR011893 Selenoprotein, Rdx type VCLMA_RS04590 dcb8da4ed21074d23c679bf0e95bd7cd 97 SUPERFAMILY SSF52833 4 87 5.37E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS04590 dcb8da4ed21074d23c679bf0e95bd7cd 97 Gene3D G3DSA:3.40.30.10 2 96 2.3E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS04590 dcb8da4ed21074d23c679bf0e95bd7cd 97 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 2.4E-26 T 22-04-2016 IPR011893 Selenoprotein, Rdx type VCLMA_RS01445 f04d42ab64cbfa7ee015a60c6864d22e 396 Gene3D G3DSA:1.20.1250.20 197 380 3.0E-19 T 22-04-2016 VCLMA_RS01445 f04d42ab64cbfa7ee015a60c6864d22e 396 Gene3D G3DSA:1.20.1250.20 14 182 8.6E-15 T 22-04-2016 VCLMA_RS01445 f04d42ab64cbfa7ee015a60c6864d22e 396 PIRSF PIRSF004925 3 389 1.3E-102 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter VCLMA_RS01445 f04d42ab64cbfa7ee015a60c6864d22e 396 PANTHER PTHR23522:SF3 1 396 1.3E-159 T 22-04-2016 VCLMA_RS01445 f04d42ab64cbfa7ee015a60c6864d22e 396 SUPERFAMILY SSF103473 9 373 1.7E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS01445 f04d42ab64cbfa7ee015a60c6864d22e 396 PANTHER PTHR23522 1 396 1.3E-159 T 22-04-2016 VCLMA_RS01445 f04d42ab64cbfa7ee015a60c6864d22e 396 Pfam PF12832 MFS_1 like family 13 361 8.6E-43 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain VCLMA_RS10480 09c8838ce1c53e243b9ae92fd11515e5 185 Pfam PF01765 Ribosome recycling factor 20 183 3.3E-63 T 22-04-2016 IPR023584 Ribosome recycling factor domain VCLMA_RS10480 09c8838ce1c53e243b9ae92fd11515e5 185 SUPERFAMILY SSF55194 2 184 2.22E-72 T 22-04-2016 IPR023584 Ribosome recycling factor domain VCLMA_RS10480 09c8838ce1c53e243b9ae92fd11515e5 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.755 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VCLMA_RS10480 09c8838ce1c53e243b9ae92fd11515e5 185 PANTHER PTHR20982 1 185 1.7E-83 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VCLMA_RS10480 09c8838ce1c53e243b9ae92fd11515e5 185 Gene3D G3DSA:1.10.132.20 67 185 1.8E-45 T 22-04-2016 IPR023584 Ribosome recycling factor domain VCLMA_RS10480 09c8838ce1c53e243b9ae92fd11515e5 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.9E-76 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PANTHER PTHR11958:SF54 1 414 0.0 T 22-04-2016 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 Gene3D G3DSA:1.10.3860.10 11 408 5.3E-111 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PANTHER PTHR11958 1 414 0.0 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 1.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 1.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 1.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 1.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.2E-44 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 Pfam PF00375 Sodium:dicarboxylate symporter family 15 403 1.2E-117 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05500 7862d4e4aa9a52e339b3e9f78f8f25a7 418 SUPERFAMILY SSF118215 15 403 5.36E-109 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS00340 4e0e1949502989ad8554bf2f1e51cf70 256 SUPERFAMILY SSF110399 1 235 7.06E-85 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VCLMA_RS00340 4e0e1949502989ad8554bf2f1e51cf70 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 4.0E-111 T 22-04-2016 VCLMA_RS00340 4e0e1949502989ad8554bf2f1e51cf70 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 43.108 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 VCLMA_RS00340 4e0e1949502989ad8554bf2f1e51cf70 256 PANTHER PTHR34266:SF2 1 256 1.1E-159 T 22-04-2016 VCLMA_RS00340 4e0e1949502989ad8554bf2f1e51cf70 256 Gene3D G3DSA:3.20.20.70 1 252 1.6E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS00340 4e0e1949502989ad8554bf2f1e51cf70 256 PANTHER PTHR34266 1 256 1.1E-159 T 22-04-2016 VCLMA_RS03535 c2bb103e76728a9f1b6a31fdcc99e2cd 548 SUPERFAMILY SSF161098 260 529 1.57E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03535 c2bb103e76728a9f1b6a31fdcc99e2cd 548 Gene3D G3DSA:1.10.3720.10 23 43 6.8E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03535 c2bb103e76728a9f1b6a31fdcc99e2cd 548 Gene3D G3DSA:1.10.3720.10 274 543 6.8E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03535 c2bb103e76728a9f1b6a31fdcc99e2cd 548 PANTHER PTHR30425 187 545 6.0E-270 T 22-04-2016 VCLMA_RS03535 c2bb103e76728a9f1b6a31fdcc99e2cd 548 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 315 535 2.0E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03535 c2bb103e76728a9f1b6a31fdcc99e2cd 548 PANTHER PTHR30425:SF7 187 545 6.0E-270 T 22-04-2016 VCLMA_RS03535 c2bb103e76728a9f1b6a31fdcc99e2cd 548 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 279 539 1.3E-75 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 Pfam PF01145 SPFH domain / Band 7 family 22 233 4.0E-29 T 22-04-2016 IPR001107 Band 7 domain VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 SMART SM00244 18 218 3.8E-47 T 22-04-2016 IPR001107 Band 7 domain VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 PANTHER PTHR10264:SF80 1 144 5.5E-106 T 22-04-2016 VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 PANTHER PTHR10264:SF80 174 322 5.5E-106 T 22-04-2016 VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 PIRSF PIRSF005651 1 326 1.5E-93 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 TIGRFAM TIGR01932 hflC: HflC protein 1 318 2.1E-142 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 SUPERFAMILY SSF117892 56 142 3.53E-22 T 22-04-2016 IPR001107 Band 7 domain VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 SUPERFAMILY SSF117892 173 223 3.53E-22 T 22-04-2016 IPR001107 Band 7 domain VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 PANTHER PTHR10264 1 144 5.5E-106 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VCLMA_RS01755 f259d0d9c7f4debe36f449a2905fa908 326 PANTHER PTHR10264 174 322 5.5E-106 T 22-04-2016 IPR001972 Stomatin family GO:0016020 VCLMA_RS08640 73018ad435e06d5ae947bf0061a78534 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 2.3E-209 T 22-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 VCLMA_RS08640 73018ad435e06d5ae947bf0061a78534 414 Pfam PF02687 FtsX-like permease family 274 407 3.3E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VCLMA_RS08640 73018ad435e06d5ae947bf0061a78534 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 7.4E-158 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VCLMA_RS08640 73018ad435e06d5ae947bf0061a78534 414 Pfam PF12704 MacB-like periplasmic core domain 30 241 8.7E-15 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VCLMA_RS08640 73018ad435e06d5ae947bf0061a78534 414 PANTHER PTHR30489 5 414 4.7E-82 T 22-04-2016 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 1.4E-228 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 SUPERFAMILY SSF54292 38 125 6.56E-21 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 SUPERFAMILY SSF52343 259 403 6.55E-36 T 22-04-2016 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 Pfam PF00970 Oxidoreductase FAD-binding domain 205 267 9.3E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 Gene3D G3DSA:2.40.30.10 125 265 7.7E-61 T 22-04-2016 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 PANTHER PTHR19370 63 177 3.7E-145 T 22-04-2016 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 PANTHER PTHR19370 206 408 3.7E-145 T 22-04-2016 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 PANTHER PTHR19370:SF32 63 177 3.7E-145 T 22-04-2016 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 PANTHER PTHR19370:SF32 206 408 3.7E-145 T 22-04-2016 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 116 1.7E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 62.443 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 SUPERFAMILY SSF63380 106 273 8.42E-35 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 Gene3D G3DSA:3.10.20.30 35 124 2.4E-20 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 386 2.3E-17 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 Gene3D G3DSA:3.40.50.80 270 407 1.9E-40 T 22-04-2016 VCLMA_RS10635 9146d59c49d45d0130d31d44114ed675 408 PIRSF PIRSF000044 1 408 9.9E-220 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VCLMA_RS02835 587860898ce1e7494dae621a2c2ddf60 122 PANTHER PTHR34039 2 122 9.5E-41 T 22-04-2016 VCLMA_RS02835 587860898ce1e7494dae621a2c2ddf60 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 6 120 1.9E-33 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 VCLMA_RS02835 587860898ce1e7494dae621a2c2ddf60 122 PANTHER PTHR34039:SF1 2 122 9.5E-41 T 22-04-2016 VCLMA_RS02835 587860898ce1e7494dae621a2c2ddf60 122 SUPERFAMILY SSF52980 7 110 1.07E-19 T 22-04-2016 IPR011335 Restriction endonuclease type II-like VCLMA_RS02835 587860898ce1e7494dae621a2c2ddf60 122 Gene3D G3DSA:3.40.1350.10 13 119 5.1E-36 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 VCLMA_RS02835 587860898ce1e7494dae621a2c2ddf60 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 118 23.456 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 VCLMA_RS02835 587860898ce1e7494dae621a2c2ddf60 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 105 1.2E-28 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 VCLMA_RS06080 5396708a474ba6461795a58c7041aae0 545 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 72 543 1.7E-192 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 VCLMA_RS06080 5396708a474ba6461795a58c7041aae0 545 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 22 545 55.844 T 22-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 VCLMA_RS06080 5396708a474ba6461795a58c7041aae0 545 Gene3D G3DSA:2.70.98.10 72 444 4.1E-168 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VCLMA_RS06080 5396708a474ba6461795a58c7041aae0 545 PIRSF PIRSF006281 26 545 2.0E-210 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 VCLMA_RS06080 5396708a474ba6461795a58c7041aae0 545 Gene3D G3DSA:2.60.40.10 449 544 5.5E-19 T 22-04-2016 IPR013783 Immunoglobulin-like fold VCLMA_RS06080 5396708a474ba6461795a58c7041aae0 545 SUPERFAMILY SSF81296 448 544 1.04E-16 T 22-04-2016 IPR014756 Immunoglobulin E-set VCLMA_RS06080 5396708a474ba6461795a58c7041aae0 545 PANTHER PTHR30504 51 544 0.0 T 22-04-2016 VCLMA_RS06080 5396708a474ba6461795a58c7041aae0 545 PANTHER PTHR30504:SF2 51 544 0.0 T 22-04-2016 VCLMA_RS06080 5396708a474ba6461795a58c7041aae0 545 SUPERFAMILY SSF74650 72 442 1.16E-162 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VCLMA_RS14250 fac13da7525c743c3be134e73e6c3dfd 126 SMART SM00354 1 52 2.8E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 VCLMA_RS14250 fac13da7525c743c3be134e73e6c3dfd 126 Gene3D G3DSA:3.40.50.2300 40 125 4.2E-28 T 22-04-2016 VCLMA_RS14250 fac13da7525c743c3be134e73e6c3dfd 126 PANTHER PTHR30146:SF2 1 126 6.6E-63 T 22-04-2016 VCLMA_RS14250 fac13da7525c743c3be134e73e6c3dfd 126 PANTHER PTHR30146 1 126 6.6E-63 T 22-04-2016 VCLMA_RS14250 fac13da7525c743c3be134e73e6c3dfd 126 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 41 124 4.7E-9 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain VCLMA_RS14250 fac13da7525c743c3be134e73e6c3dfd 126 SUPERFAMILY SSF53822 40 124 1.76E-16 T 22-04-2016 IPR028082 Periplasmic binding protein-like I VCLMA_RS14250 fac13da7525c743c3be134e73e6c3dfd 126 Gene3D G3DSA:1.10.260.40 1 39 1.4E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 SUPERFAMILY SSF52467 6 234 6.54E-72 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 PANTHER PTHR11085:SF17 6 234 2.2E-79 T 22-04-2016 VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 PANTHER PTHR11085 6 234 2.2E-79 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 Gene3D G3DSA:3.40.50.1220 6 21 4.7E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 Gene3D G3DSA:3.40.50.1220 71 113 4.7E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 Gene3D G3DSA:3.40.50.1220 165 231 4.7E-40 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 Pfam PF02146 Sir2 family 13 186 8.4E-50 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 56.387 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 Gene3D G3DSA:3.30.1600.10 22 61 4.5E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain VCLMA_RS06995 4a193ef604dd816b451fe6ddb5c53c97 246 Gene3D G3DSA:3.30.1600.10 114 158 4.5E-28 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain VCLMA_RS10735 f3d1bad431984d341ea240fb47da319a 368 Pfam PF03562 MltA specific insert domain 98 253 1.5E-36 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VCLMA_RS10735 f3d1bad431984d341ea240fb47da319a 368 SMART SM00925 120 253 6.8E-68 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 VCLMA_RS10735 f3d1bad431984d341ea240fb47da319a 368 Pfam PF06725 3D domain 273 349 3.4E-20 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VCLMA_RS10735 f3d1bad431984d341ea240fb47da319a 368 PANTHER PTHR30124:SF0 1 367 2.4E-137 T 22-04-2016 VCLMA_RS10735 f3d1bad431984d341ea240fb47da319a 368 SUPERFAMILY SSF50685 25 351 1.53E-102 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VCLMA_RS10735 f3d1bad431984d341ea240fb47da319a 368 Gene3D G3DSA:2.40.40.10 162 352 2.2E-41 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VCLMA_RS10735 f3d1bad431984d341ea240fb47da319a 368 Gene3D G3DSA:2.40.40.10 74 160 7.2E-10 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain VCLMA_RS10735 f3d1bad431984d341ea240fb47da319a 368 PANTHER PTHR30124 1 367 2.4E-137 T 22-04-2016 VCLMA_RS06335 3ff29fa7bb4ddfcd8d2422571b921502 158 PANTHER PTHR23091 1 148 2.0E-27 T 22-04-2016 VCLMA_RS06335 3ff29fa7bb4ddfcd8d2422571b921502 158 Gene3D G3DSA:3.40.630.30 11 147 1.6E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS06335 3ff29fa7bb4ddfcd8d2422571b921502 158 PANTHER PTHR23091:SF122 1 148 2.0E-27 T 22-04-2016 VCLMA_RS06335 3ff29fa7bb4ddfcd8d2422571b921502 158 SUPERFAMILY SSF55729 4 148 6.93E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS06335 3ff29fa7bb4ddfcd8d2422571b921502 158 Pfam PF00583 Acetyltransferase (GNAT) family 63 146 2.7E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS08770 f48fd80c2d51f3ab7fb8ecea261c657a 256 Gene3D G3DSA:1.20.1260.10 109 255 9.8E-89 T 22-04-2016 IPR012347 Ferritin-related VCLMA_RS08770 f48fd80c2d51f3ab7fb8ecea261c657a 256 Gene3D G3DSA:1.20.1260.10 8 61 9.8E-89 T 22-04-2016 IPR012347 Ferritin-related VCLMA_RS08770 f48fd80c2d51f3ab7fb8ecea261c657a 256 PANTHER PTHR42637:SF1 1 255 2.6E-114 T 22-04-2016 VCLMA_RS08770 f48fd80c2d51f3ab7fb8ecea261c657a 256 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 9 252 9.5E-127 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VCLMA_RS08770 f48fd80c2d51f3ab7fb8ecea261c657a 256 PANTHER PTHR42637 1 255 2.6E-114 T 22-04-2016 VCLMA_RS08770 f48fd80c2d51f3ab7fb8ecea261c657a 256 SUPERFAMILY SSF47240 11 61 1.08E-74 T 22-04-2016 IPR009078 Ferritin-like superfamily VCLMA_RS08770 f48fd80c2d51f3ab7fb8ecea261c657a 256 SUPERFAMILY SSF47240 109 255 1.08E-74 T 22-04-2016 IPR009078 Ferritin-like superfamily VCLMA_RS08770 f48fd80c2d51f3ab7fb8ecea261c657a 256 PIRSF PIRSF020736 2 256 4.0E-94 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 VCLMA_RS00335 1a5fdcffc924fdb65abcec6149d88a2e 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 68 3.4E-16 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis VCLMA_RS00335 1a5fdcffc924fdb65abcec6149d88a2e 68 SUPERFAMILY SSF54285 3 68 3.05E-15 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VCLMA_RS00335 1a5fdcffc924fdb65abcec6149d88a2e 68 Pfam PF02597 ThiS family 17 68 4.0E-12 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VCLMA_RS00335 1a5fdcffc924fdb65abcec6149d88a2e 68 PANTHER PTHR34472:SF1 1 68 1.8E-22 T 22-04-2016 VCLMA_RS00335 1a5fdcffc924fdb65abcec6149d88a2e 68 Gene3D G3DSA:3.10.20.30 3 68 5.1E-20 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS00335 1a5fdcffc924fdb65abcec6149d88a2e 68 PANTHER PTHR34472 1 68 1.8E-22 T 22-04-2016 VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 SMART SM00490 29 130 7.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 SMART SM00847 189 279 6.7E-10 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 Pfam PF04408 Helicase associated domain (HA2) 190 249 4.2E-10 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 SUPERFAMILY SSF52540 5 242 2.97E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 2 436 6.4E-180 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 Pfam PF00271 Helicase conserved C-terminal domain 8 129 1.1E-12 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 PANTHER PTHR18934 295 310 9.3E-65 T 22-04-2016 VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 PANTHER PTHR18934 9 233 9.3E-65 T 22-04-2016 VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 PANTHER PTHR18934 413 419 9.3E-65 T 22-04-2016 VCLMA_RS15790 742bfdd7c2830bc54568f773c5abc922 436 Gene3D G3DSA:3.40.50.300 7 142 3.1E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00140 5500aa59c9da57370ffcfacc48c8b4e7 312 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 VCLMA_RS00140 5500aa59c9da57370ffcfacc48c8b4e7 312 SUPERFAMILY SSF56752 7 307 1.16E-103 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VCLMA_RS00140 5500aa59c9da57370ffcfacc48c8b4e7 312 Pfam PF01063 Amino-transferase class IV 36 268 6.8E-47 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VCLMA_RS00140 5500aa59c9da57370ffcfacc48c8b4e7 312 PANTHER PTHR11825 1 306 1.3E-129 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 VCLMA_RS00140 5500aa59c9da57370ffcfacc48c8b4e7 312 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 4.2E-145 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 VCLMA_RS00140 5500aa59c9da57370ffcfacc48c8b4e7 312 Gene3D G3DSA:3.30.470.10 7 130 2.8E-42 T 22-04-2016 VCLMA_RS00140 5500aa59c9da57370ffcfacc48c8b4e7 312 Gene3D G3DSA:3.20.10.10 134 295 4.8E-59 T 22-04-2016 VCLMA_RS00140 5500aa59c9da57370ffcfacc48c8b4e7 312 PANTHER PTHR11825:SF7 1 306 1.3E-129 T 22-04-2016 VCLMA_RS03500 ac93a2f929d4c934a1d9bfa514c2eb89 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 9.5E-123 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VCLMA_RS03500 ac93a2f929d4c934a1d9bfa514c2eb89 304 PANTHER PTHR38103 2 304 1.0E-160 T 22-04-2016 VCLMA_RS03500 ac93a2f929d4c934a1d9bfa514c2eb89 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 37.947 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 VCLMA_RS03500 ac93a2f929d4c934a1d9bfa514c2eb89 304 PANTHER PTHR38103:SF1 2 304 1.0E-160 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.2E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.50.50.60 272 336 2.6E-66 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.50.50.60 7 149 2.6E-66 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.50.50.60 152 271 1.5E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PIRSF PIRSF000350 1 469 5.5E-83 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.6E-41 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 2.6E-41 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 2.6E-41 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 2.6E-41 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 2.6E-41 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 6.9E-66 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 Gene3D G3DSA:3.30.390.30 337 462 2.8E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 8.5E-151 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 SUPERFAMILY SSF51905 1 322 3.89E-59 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 SUPERFAMILY SSF55424 343 466 6.36E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 3.2E-68 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 3.2E-68 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 3.2E-68 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 3.2E-68 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.2E-68 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.2E-68 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 3.2E-68 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.2E-68 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.2E-68 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PANTHER PTHR22912:SF160 1 459 2.9E-271 T 22-04-2016 VCLMA_RS11165 7b47a9c75e9481af3b101d71c84ffe29 475 PANTHER PTHR22912 1 459 2.9E-271 T 22-04-2016 VCLMA_RS04970 ed426c7b9e3ef4355bba8928799961c1 145 PANTHER PTHR37421 1 145 2.6E-74 T 22-04-2016 VCLMA_RS04970 ed426c7b9e3ef4355bba8928799961c1 145 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 42.266 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VCLMA_RS04970 ed426c7b9e3ef4355bba8928799961c1 145 PANTHER PTHR37421:SF1 1 145 2.6E-74 T 22-04-2016 VCLMA_RS04970 ed426c7b9e3ef4355bba8928799961c1 145 PIRSF PIRSF006173 1 144 4.5E-65 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 VCLMA_RS04970 ed426c7b9e3ef4355bba8928799961c1 145 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 4.3E-9 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 PANTHER PTHR22726 4 349 1.9E-137 T 22-04-2016 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 PANTHER PTHR22726:SF10 4 349 1.9E-137 T 22-04-2016 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 Gene3D G3DSA:3.30.2010.10 64 147 1.1E-18 T 22-04-2016 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 Pfam PF01435 Peptidase family M48 70 255 2.9E-28 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 SMART SM00028 307 340 0.14 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 SMART SM00028 426 459 71.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 SMART SM00028 341 374 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 481 31.969 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 SUPERFAMILY SSF48452 310 455 1.52E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 Pfam PF14559 Tetratricopeptide repeat 352 415 2.0E-11 T 22-04-2016 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 Pfam PF13181 Tetratricopeptide repeat 309 340 0.068 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS09970 1bc447998ede02b9ce7601aa89d3511b 484 Gene3D G3DSA:1.25.40.10 310 455 1.7E-22 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 SUPERFAMILY SSF57716 108 146 4.42E-10 T 22-04-2016 VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 SUPERFAMILY SSF109635 7 106 5.1E-36 T 22-04-2016 VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 PANTHER PTHR33823 5 146 2.3E-68 T 22-04-2016 VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 9.7E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 9.7E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 107 140 2.9E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.808 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 PANTHER PTHR33823:SF2 5 146 2.3E-68 T 22-04-2016 VCLMA_RS02905 d6038e852347d4934fccd25ae3755b57 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 1.1E-50 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VCLMA_RS06400 57212aa81fbc742369cf3ad6ea6e8ce3 91 SUPERFAMILY SSF54975 3 90 1.85E-26 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VCLMA_RS06400 57212aa81fbc742369cf3ad6ea6e8ce3 91 Gene3D G3DSA:3.30.70.100 5 90 6.2E-28 T 22-04-2016 VCLMA_RS06400 57212aa81fbc742369cf3ad6ea6e8ce3 91 PANTHER PTHR10029 8 91 2.5E-26 T 22-04-2016 VCLMA_RS06400 57212aa81fbc742369cf3ad6ea6e8ce3 91 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VCLMA_RS06400 57212aa81fbc742369cf3ad6ea6e8ce3 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VCLMA_RS06400 57212aa81fbc742369cf3ad6ea6e8ce3 91 Pfam PF00708 Acylphosphatase 4 90 3.7E-24 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VCLMA_RS01895 35fb2eca95afbcf46aa3a195eb637221 316 Pfam PF01207 Dihydrouridine synthase (Dus) 1 305 6.4E-92 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS01895 35fb2eca95afbcf46aa3a195eb637221 316 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 311 50.161 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VCLMA_RS01895 35fb2eca95afbcf46aa3a195eb637221 316 Gene3D G3DSA:3.20.20.70 1 237 2.5E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS01895 35fb2eca95afbcf46aa3a195eb637221 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 76 94 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS01895 35fb2eca95afbcf46aa3a195eb637221 316 SUPERFAMILY SSF51395 1 308 1.3E-74 T 22-04-2016 VCLMA_RS01895 35fb2eca95afbcf46aa3a195eb637221 316 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 1 308 3.8E-156 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VCLMA_RS01895 35fb2eca95afbcf46aa3a195eb637221 316 PIRSF PIRSF006621 1 314 3.8E-71 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS01895 35fb2eca95afbcf46aa3a195eb637221 316 PANTHER PTHR11082 1 310 1.0E-159 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VCLMA_RS01895 35fb2eca95afbcf46aa3a195eb637221 316 PANTHER PTHR11082:SF29 1 310 1.0E-159 T 22-04-2016 VCLMA_RS11500 bf3b1f1436a6ca9e15a412b23efe64b3 164 Gene3D G3DSA:3.30.70.1150 83 162 1.5E-28 T 22-04-2016 VCLMA_RS11500 bf3b1f1436a6ca9e15a412b23efe64b3 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 5.0E-62 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS11500 bf3b1f1436a6ca9e15a412b23efe64b3 164 SUPERFAMILY SSF55021 1 75 3.31E-22 T 22-04-2016 VCLMA_RS11500 bf3b1f1436a6ca9e15a412b23efe64b3 164 PANTHER PTHR30239 1 164 5.0E-91 T 22-04-2016 VCLMA_RS11500 bf3b1f1436a6ca9e15a412b23efe64b3 164 Gene3D G3DSA:3.30.70.260 1 78 1.1E-34 T 22-04-2016 VCLMA_RS11500 bf3b1f1436a6ca9e15a412b23efe64b3 164 Pfam PF13710 ACT domain 11 73 2.8E-17 T 22-04-2016 VCLMA_RS11500 bf3b1f1436a6ca9e15a412b23efe64b3 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 1.3E-25 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 VCLMA_RS11500 bf3b1f1436a6ca9e15a412b23efe64b3 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 2.0E-37 T 22-04-2016 VCLMA_RS11500 bf3b1f1436a6ca9e15a412b23efe64b3 164 SUPERFAMILY SSF55021 79 162 5.15E-27 T 22-04-2016 VCLMA_RS07165 a1890a8551129761f477204413977297 134 PANTHER PTHR30558 1 134 3.2E-35 T 22-04-2016 VCLMA_RS07165 a1890a8551129761f477204413977297 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 132 5.9E-29 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VCLMA_RS07165 a1890a8551129761f477204413977297 134 PANTHER PTHR30558:SF3 1 134 3.2E-35 T 22-04-2016 VCLMA_RS02230 85be7aba581218e67532f22a42dcc824 271 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 2.3E-86 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VCLMA_RS02230 85be7aba581218e67532f22a42dcc824 271 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 263 3.2E-76 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VCLMA_RS02230 85be7aba581218e67532f22a42dcc824 271 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VCLMA_RS02230 85be7aba581218e67532f22a42dcc824 271 Gene3D G3DSA:1.10.8.100 200 263 1.0E-23 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like VCLMA_RS02230 85be7aba581218e67532f22a42dcc824 271 SUPERFAMILY SSF53335 8 264 2.57E-80 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS02230 85be7aba581218e67532f22a42dcc824 271 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 55.374 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VCLMA_RS02230 85be7aba581218e67532f22a42dcc824 271 PANTHER PTHR11727 8 265 3.0E-101 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VCLMA_RS02230 85be7aba581218e67532f22a42dcc824 271 SMART SM00650 25 197 1.7E-89 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VCLMA_RS02230 85be7aba581218e67532f22a42dcc824 271 Gene3D G3DSA:3.40.50.150 8 197 2.1E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 Pfam PF01433 Peptidase family M1 42 383 3.6E-67 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 PANTHER PTHR11533:SF152 10 584 0.0 T 22-04-2016 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 PANTHER PTHR11533:SF152 608 866 0.0 T 22-04-2016 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 Pfam PF11940 Domain of unknown function (DUF3458) 458 823 1.6E-133 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 Gene3D G3DSA:1.25.50.10 545 866 3.4E-118 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 PANTHER PTHR11533 10 584 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 PANTHER PTHR11533 608 866 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 Gene3D G3DSA:1.10.390.10 307 450 4.3E-33 T 22-04-2016 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 865 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 SUPERFAMILY SSF63737 3 192 7.59E-46 T 22-04-2016 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 4.5E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 4.5E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 4.5E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 4.5E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 4.5E-9 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VCLMA_RS06925 27a775f2cf4b5c5c066ffc8802807578 867 SUPERFAMILY SSF55486 203 449 1.23E-74 T 22-04-2016 VCLMA_RS16395 8c1f73cb84ee0999db1eb056e9fc7194 115 PANTHER PTHR30217:SF6 1 115 2.2E-47 T 22-04-2016 VCLMA_RS16395 8c1f73cb84ee0999db1eb056e9fc7194 115 PANTHER PTHR30217 1 115 2.2E-47 T 22-04-2016 VCLMA_RS16395 8c1f73cb84ee0999db1eb056e9fc7194 115 Pfam PF16325 Peptidase family U32 C-terminal domain 73 114 4.5E-11 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS16395 8c1f73cb84ee0999db1eb056e9fc7194 115 Pfam PF01136 Peptidase family U32 1 57 1.0E-15 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS03845 3341f32cb6e87ea1c0137b3e9e87c8a5 433 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 426 2.7E-178 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS03845 3341f32cb6e87ea1c0137b3e9e87c8a5 433 PANTHER PTHR35806 1 65 3.1E-202 T 22-04-2016 VCLMA_RS03845 3341f32cb6e87ea1c0137b3e9e87c8a5 433 PANTHER PTHR35806 91 433 3.1E-202 T 22-04-2016 VCLMA_RS03845 3341f32cb6e87ea1c0137b3e9e87c8a5 433 PIRSF PIRSF015658 1 432 6.5E-173 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS03845 3341f32cb6e87ea1c0137b3e9e87c8a5 433 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 430 1.9E-157 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS05125 2b2026b7e92bc4a73b930c834e619298 543 PIRSF PIRSF002741 1 543 2.1E-123 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VCLMA_RS05125 2b2026b7e92bc4a73b930c834e619298 543 Gene3D G3DSA:3.10.105.10 311 511 9.9E-71 T 22-04-2016 VCLMA_RS05125 2b2026b7e92bc4a73b930c834e619298 543 PANTHER PTHR30290 1 541 2.2E-202 T 22-04-2016 VCLMA_RS05125 2b2026b7e92bc4a73b930c834e619298 543 SUPERFAMILY SSF53850 40 529 2.17E-154 T 22-04-2016 VCLMA_RS05125 2b2026b7e92bc4a73b930c834e619298 543 Gene3D G3DSA:3.40.190.10 158 310 2.2E-55 T 22-04-2016 VCLMA_RS05125 2b2026b7e92bc4a73b930c834e619298 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site VCLMA_RS05125 2b2026b7e92bc4a73b930c834e619298 543 PANTHER PTHR30290:SF10 1 541 2.2E-202 T 22-04-2016 VCLMA_RS05125 2b2026b7e92bc4a73b930c834e619298 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 463 5.2E-100 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VCLMA_RS07925 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 PANTHER PTHR11049:SF5 1 138 1.4E-73 T 22-04-2016 VCLMA_RS07925 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 Gene3D G3DSA:3.10.129.10 4 129 2.7E-42 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS07925 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 SUPERFAMILY SSF54637 9 129 2.96E-38 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS07925 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 PANTHER PTHR11049 1 138 1.4E-73 T 22-04-2016 VCLMA_RS07925 7fb9ee320fccaaeba0c0b91cf97ffa5e 139 Pfam PF03061 Thioesterase superfamily 26 98 5.4E-20 T 22-04-2016 IPR006683 Thioesterase domain VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 Gene3D G3DSA:3.30.830.10 363 473 2.0E-11 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 Gene3D G3DSA:3.30.830.10 4 76 6.6E-7 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 PANTHER PTHR11851 1 473 4.3E-162 T 22-04-2016 VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 Pfam PF00675 Insulinase (Peptidase family M16) 155 270 1.2E-10 T 22-04-2016 IPR011765 Peptidase M16, N-terminal VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 SUPERFAMILY SSF63411 136 337 7.83E-43 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 PANTHER PTHR11851:SF136 1 473 4.3E-162 T 22-04-2016 VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 Gene3D G3DSA:3.30.830.10 137 349 9.0E-45 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 SUPERFAMILY SSF63411 2 86 2.27E-12 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 SUPERFAMILY SSF63411 353 478 1.52E-22 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS15595 d3ba549ee9cf6e57f22186ecbe6d66e9 486 Pfam PF05193 Peptidase M16 inactive domain 302 473 4.2E-26 T 22-04-2016 IPR007863 Peptidase M16, C-terminal VCLMA_RS07595 3ca1136ab971038c62f0db849345d001 401 Pfam PF07690 Major Facilitator Superfamily 25 365 1.9E-49 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS07595 3ca1136ab971038c62f0db849345d001 401 PANTHER PTHR23502 17 389 1.9E-191 T 22-04-2016 VCLMA_RS07595 3ca1136ab971038c62f0db849345d001 401 Gene3D G3DSA:1.20.1250.20 21 201 1.7E-30 T 22-04-2016 VCLMA_RS07595 3ca1136ab971038c62f0db849345d001 401 Gene3D G3DSA:1.20.1250.20 218 397 1.5E-7 T 22-04-2016 VCLMA_RS07595 3ca1136ab971038c62f0db849345d001 401 PANTHER PTHR23502:SF39 17 389 1.9E-191 T 22-04-2016 VCLMA_RS07595 3ca1136ab971038c62f0db849345d001 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 17 395 1.4E-118 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 VCLMA_RS07595 3ca1136ab971038c62f0db849345d001 401 SUPERFAMILY SSF103473 9 399 1.7E-65 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS08695 a96dedeb490f567a5f1b077e09d7e978 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 1.6E-75 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB VCLMA_RS08695 a96dedeb490f567a5f1b077e09d7e978 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 9 185 6.7E-66 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB VCLMA_RS08695 a96dedeb490f567a5f1b077e09d7e978 196 PANTHER PTHR40593 1 196 7.3E-103 T 22-04-2016 VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 PANTHER PTHR24096:SF193 8 600 1.1E-238 T 22-04-2016 VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 Gene3D G3DSA:2.30.38.10 401 460 7.7E-19 T 22-04-2016 VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 Gene3D G3DSA:3.40.50.980 8 189 9.0E-33 T 22-04-2016 VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 SUPERFAMILY SSF56801 7 285 2.88E-115 T 22-04-2016 VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 SUPERFAMILY SSF56801 336 596 2.88E-115 T 22-04-2016 VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 Gene3D G3DSA:3.40.50.980 190 280 3.0E-31 T 22-04-2016 VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 Gene3D G3DSA:3.40.50.980 333 387 3.0E-31 T 22-04-2016 VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 22-04-2016 IPR020845 AMP-binding, conserved site VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 Pfam PF00501 AMP-binding enzyme 14 466 2.4E-99 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS11510 fa55a5b89fa77d30e3efca58d6e0e848 601 PANTHER PTHR24096 8 600 1.1E-238 T 22-04-2016 VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 Gene3D G3DSA:3.40.50.2300 3 132 2.5E-40 T 22-04-2016 VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 Gene3D G3DSA:1.10.3210.10 170 354 2.1E-16 T 22-04-2016 IPR006674 HD domain VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 SMART SM00448 9 121 3.4E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 Pfam PF13487 HD domain 233 303 1.2E-17 T 22-04-2016 VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 SUPERFAMILY SSF52172 8 153 1.04E-37 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 SMART SM00471 170 321 1.4E-8 T 22-04-2016 IPR003607 HD/PDEase domain VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 PANTHER PTHR26402 277 373 3.5E-79 T 22-04-2016 VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 PANTHER PTHR26402 9 142 3.5E-79 T 22-04-2016 VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 PANTHER PTHR26402:SF495 277 373 3.5E-79 T 22-04-2016 VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 PANTHER PTHR26402:SF495 9 142 3.5E-79 T 22-04-2016 VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 Pfam PF00072 Response regulator receiver domain 11 121 1.3E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06370 c5c0a83b0467f876c6f6ace51ade519d 374 SUPERFAMILY SSF109604 151 348 1.07E-31 T 22-04-2016 VCLMA_RS08895 7864d4c4f7625aac7eef01ab8d323ffa 310 PANTHER PTHR13773:SF11 28 307 5.2E-145 T 22-04-2016 VCLMA_RS08895 7864d4c4f7625aac7eef01ab8d323ffa 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 VCLMA_RS08895 7864d4c4f7625aac7eef01ab8d323ffa 310 Pfam PF01148 Cytidylyltransferase family 42 307 1.1E-68 T 22-04-2016 VCLMA_RS08895 7864d4c4f7625aac7eef01ab8d323ffa 310 PANTHER PTHR13773 28 307 5.2E-145 T 22-04-2016 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 PANTHER PTHR33910:SF1 2 126 1.1E-29 T 22-04-2016 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 5.8E-20 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 122 6.8E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.357 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.3E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.3E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.3E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.3E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 Gene3D G3DSA:1.20.5.1030 65 122 1.0E-23 T 22-04-2016 VCLMA_RS01580 997466a7aeda660ab4d5fdb4574c7fa5 126 PANTHER PTHR33910 2 126 1.1E-29 T 22-04-2016 VCLMA_RS06360 5d3c3d289813734b3b932af9ca038898 339 SUPERFAMILY SSF56529 76 334 9.94E-56 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VCLMA_RS06360 5d3c3d289813734b3b932af9ca038898 339 Gene3D G3DSA:3.90.850.10 305 316 1.9E-41 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VCLMA_RS06360 5d3c3d289813734b3b932af9ca038898 339 Gene3D G3DSA:3.90.850.10 67 269 1.9E-41 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VCLMA_RS06360 5d3c3d289813734b3b932af9ca038898 339 PANTHER PTHR11820:SF85 7 267 2.7E-161 T 22-04-2016 VCLMA_RS06360 5d3c3d289813734b3b932af9ca038898 339 PANTHER PTHR11820:SF85 283 338 2.7E-161 T 22-04-2016 VCLMA_RS06360 5d3c3d289813734b3b932af9ca038898 339 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 80 332 6.7E-44 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 VCLMA_RS06360 5d3c3d289813734b3b932af9ca038898 339 PANTHER PTHR11820 7 267 2.7E-161 T 22-04-2016 VCLMA_RS06360 5d3c3d289813734b3b932af9ca038898 339 PANTHER PTHR11820 283 338 2.7E-161 T 22-04-2016 VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 733 24.924 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 SMART SM00490 493 590 4.1E-11 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 Gene3D G3DSA:3.40.50.300 458 633 4.5E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 Gene3D G3DSA:3.40.50.300 198 383 1.0E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 SUPERFAMILY SSF52540 461 634 2.23E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 PANTHER PTHR30580 1 734 9.6E-286 T 22-04-2016 VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 TIGRFAM TIGR00595 priA: primosomal protein N' 222 730 2.6E-192 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 SMART SM00487 195 396 1.5E-18 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 Pfam PF00271 Helicase conserved C-terminal domain 515 589 1.7E-7 T 22-04-2016 IPR001650 Helicase, C-terminal VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 SUPERFAMILY SSF52540 183 380 8.5E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12470 d08386be75c763bfbb0399665dab9a78 734 Pfam PF00270 DEAD/DEAH box helicase 205 364 3.6E-14 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VCLMA_RS03550 84c05692aaeea1bdb6baf3c52814dc1a 258 PANTHER PTHR34383 2 258 9.7E-189 T 22-04-2016 VCLMA_RS03550 84c05692aaeea1bdb6baf3c52814dc1a 258 PANTHER PTHR34383:SF1 2 258 9.7E-189 T 22-04-2016 VCLMA_RS03550 84c05692aaeea1bdb6baf3c52814dc1a 258 SUPERFAMILY SSF52540 35 223 2.13E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03550 84c05692aaeea1bdb6baf3c52814dc1a 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 230 3.3E-116 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related VCLMA_RS03550 84c05692aaeea1bdb6baf3c52814dc1a 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 3 230 3.5E-116 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 VCLMA_RS03550 84c05692aaeea1bdb6baf3c52814dc1a 258 PIRSF PIRSF028756 1 258 8.8E-135 T 22-04-2016 IPR016898 Polyphosphate kinase 2 VCLMA_RS03550 84c05692aaeea1bdb6baf3c52814dc1a 258 Gene3D G3DSA:3.40.50.300 3 240 9.0E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02375 d67672a6ea487cf63d107caf1513bde5 231 PANTHER PTHR33607 3 225 1.1E-59 T 22-04-2016 VCLMA_RS02375 d67672a6ea487cf63d107caf1513bde5 231 SUPERFAMILY SSF54060 21 229 2.35E-91 T 22-04-2016 VCLMA_RS02375 d67672a6ea487cf63d107caf1513bde5 231 Pfam PF04231 Endonuclease I 34 227 6.5E-42 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 VCLMA_RS07330 814e5899b624e910bfcbeba529fadf36 516 PANTHER PTHR22773:SF67 48 335 1.3E-128 T 22-04-2016 VCLMA_RS07330 814e5899b624e910bfcbeba529fadf36 516 Pfam PF00361 Proton-conducting membrane transporter 113 333 2.1E-42 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 VCLMA_RS07330 814e5899b624e910bfcbeba529fadf36 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 226 252 1.3E-20 T 22-04-2016 VCLMA_RS07330 814e5899b624e910bfcbeba529fadf36 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 62 87 1.3E-20 T 22-04-2016 VCLMA_RS07330 814e5899b624e910bfcbeba529fadf36 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 204 225 1.3E-20 T 22-04-2016 VCLMA_RS07330 814e5899b624e910bfcbeba529fadf36 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 293 305 1.3E-20 T 22-04-2016 VCLMA_RS07330 814e5899b624e910bfcbeba529fadf36 516 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 137 158 1.3E-20 T 22-04-2016 VCLMA_RS07330 814e5899b624e910bfcbeba529fadf36 516 PANTHER PTHR22773 48 335 1.3E-128 T 22-04-2016 VCLMA_RS07295 3f42db55b1ccf2ce7b872cfc3552b871 116 PANTHER PTHR38482 1 116 7.5E-62 T 22-04-2016 VCLMA_RS07295 3f42db55b1ccf2ce7b872cfc3552b871 116 PIRSF PIRSF021239 1 114 1.5E-57 T 22-04-2016 IPR007437 Putative member of DMT superfamily VCLMA_RS07295 3f42db55b1ccf2ce7b872cfc3552b871 116 Pfam PF04342 Putative member of DMT superfamily (DUF486) 8 111 4.8E-47 T 22-04-2016 IPR007437 Putative member of DMT superfamily VCLMA_RS02535 76b24aed74b954b6ba3185525167e6e6 267 PANTHER PTHR30622 1 267 2.0E-134 T 22-04-2016 VCLMA_RS02535 76b24aed74b954b6ba3185525167e6e6 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.493 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VCLMA_RS02535 76b24aed74b954b6ba3185525167e6e6 267 PANTHER PTHR30622:SF4 1 267 2.0E-134 T 22-04-2016 VCLMA_RS02535 76b24aed74b954b6ba3185525167e6e6 267 Pfam PF02673 Bacitracin resistance protein BacA 7 258 4.6E-74 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VCLMA_RS02535 76b24aed74b954b6ba3185525167e6e6 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 257 3.1E-73 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 Pfam PF01734 Patatin-like phospholipase 36 227 5.2E-30 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 Gene3D G3DSA:3.40.1090.10 28 220 6.3E-15 T 22-04-2016 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 PANTHER PTHR14226 138 459 1.2E-106 T 22-04-2016 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 PANTHER PTHR14226 10 122 1.2E-106 T 22-04-2016 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 SUPERFAMILY SSF52151 133 321 7.32E-58 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 SUPERFAMILY SSF52151 30 103 7.32E-58 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 Pfam PF07244 Surface antigen variable number repeat 347 417 4.8E-6 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 Gene3D G3DSA:3.40.1090.10 221 258 8.6E-4 T 22-04-2016 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 PANTHER PTHR14226:SF37 138 459 1.2E-106 T 22-04-2016 VCLMA_RS02930 7976a9b91dab16cbad86af65a245186b 763 PANTHER PTHR14226:SF37 10 122 1.2E-106 T 22-04-2016 VCLMA_RS05395 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 66 79 2.6E-11 T 22-04-2016 IPR014025 Glutaredoxin subgroup VCLMA_RS05395 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 3 21 2.6E-11 T 22-04-2016 IPR014025 Glutaredoxin subgroup VCLMA_RS05395 19945741b7ab4947aad25a1852c7a832 87 PRINTS PR00160 Glutaredoxin signature 52 65 2.6E-11 T 22-04-2016 IPR014025 Glutaredoxin subgroup VCLMA_RS05395 19945741b7ab4947aad25a1852c7a832 87 PANTHER PTHR10168:SF85 1 82 2.8E-46 T 22-04-2016 VCLMA_RS05395 19945741b7ab4947aad25a1852c7a832 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 2.7E-49 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VCLMA_RS05395 19945741b7ab4947aad25a1852c7a832 87 Pfam PF00462 Glutaredoxin 3 69 1.6E-16 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VCLMA_RS05395 19945741b7ab4947aad25a1852c7a832 87 SUPERFAMILY SSF52833 3 82 1.54E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS05395 19945741b7ab4947aad25a1852c7a832 87 Gene3D G3DSA:3.40.30.10 2 82 5.2E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS05395 19945741b7ab4947aad25a1852c7a832 87 PANTHER PTHR10168 1 82 2.8E-46 T 22-04-2016 VCLMA_RS08590 a615b22eb34bde86c74f4642a97fe560 166 Gene3D G3DSA:1.10.287.680 1 52 9.3E-30 T 22-04-2016 IPR023145 YfbU, helix-hairpin domain VCLMA_RS08590 a615b22eb34bde86c74f4642a97fe560 166 SUPERFAMILY SSF116960 1 166 1.31E-63 T 22-04-2016 VCLMA_RS08590 a615b22eb34bde86c74f4642a97fe560 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.662 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VCLMA_RS08590 a615b22eb34bde86c74f4642a97fe560 166 PIRSF PIRSF006272 1 166 1.4E-82 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VCLMA_RS08590 a615b22eb34bde86c74f4642a97fe560 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 3.0E-96 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VCLMA_RS08590 a615b22eb34bde86c74f4642a97fe560 166 Gene3D G3DSA:1.10.3190.10 53 166 4.3E-47 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain VCLMA_RS08590 a615b22eb34bde86c74f4642a97fe560 166 Pfam PF03887 YfbU domain 1 166 2.1E-70 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU VCLMA_RS11845 a2f3db0355b915158daa4a649ef30199 115 PANTHER PTHR12510 1 114 8.6E-69 T 22-04-2016 VCLMA_RS11845 a2f3db0355b915158daa4a649ef30199 115 SUPERFAMILY SSF110857 3 114 4.58E-33 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VCLMA_RS11845 a2f3db0355b915158daa4a649ef30199 115 PANTHER PTHR12510:SF6 1 114 8.6E-69 T 22-04-2016 VCLMA_RS11845 a2f3db0355b915158daa4a649ef30199 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 2.7E-27 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VCLMA_RS11845 a2f3db0355b915158daa4a649ef30199 115 Gene3D G3DSA:3.10.490.10 2 114 2.7E-40 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VCLMA_RS02795 de8d52f4b6d11b1db6381760fadb44c8 130 SUPERFAMILY SSF54211 5 130 2.31E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS02795 de8d52f4b6d11b1db6381760fadb44c8 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 5.6E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02795 de8d52f4b6d11b1db6381760fadb44c8 130 Gene3D G3DSA:3.30.230.10 4 130 2.0E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS02795 de8d52f4b6d11b1db6381760fadb44c8 130 PANTHER PTHR21569 1 130 8.5E-73 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02795 de8d52f4b6d11b1db6381760fadb44c8 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.585 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid VCLMA_RS02795 de8d52f4b6d11b1db6381760fadb44c8 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VCLMA_RS10815 f07ee52b4abbb550d51389dfa3ad5cce 183 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 108 1.4E-7 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VCLMA_RS10815 f07ee52b4abbb550d51389dfa3ad5cce 183 SUPERFAMILY SSF110857 1 123 1.28E-18 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VCLMA_RS10815 f07ee52b4abbb550d51389dfa3ad5cce 183 Gene3D G3DSA:3.10.490.10 1 140 1.9E-8 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 5.8E-99 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 Gene3D G3DSA:3.30.300.20 18 107 1.8E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 SMART SM00322 60 125 1.8E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 PANTHER PTHR11760:SF19 2 232 6.8E-150 T 22-04-2016 VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 Pfam PF07650 KH domain 38 111 1.2E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 SUPERFAMILY SSF54814 2 106 1.15E-36 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.3E-42 T 22-04-2016 VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.055 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 PANTHER PTHR11760 2 232 6.8E-150 T 22-04-2016 VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 SUPERFAMILY SSF54821 108 206 8.76E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12060 b39826a12b2d2d5e099b65d09d7233e6 233 Gene3D G3DSA:3.30.1140.32 108 207 1.9E-47 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 SUPERFAMILY SSF47240 2 155 1.33E-43 T 22-04-2016 IPR009078 Ferritin-like superfamily VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PANTHER PTHR30295 1 156 2.1E-66 T 22-04-2016 VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PANTHER PTHR30295:SF6 1 156 2.1E-66 T 22-04-2016 VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 Pfam PF00210 Ferritin-like domain 18 155 6.5E-24 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 7.8E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 7.8E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 7.8E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 Gene3D G3DSA:1.20.1260.10 2 156 1.8E-56 T 22-04-2016 IPR012347 Ferritin-related VCLMA_RS00685 9c5a451fb7f54e52ca7f2c49ef67ef91 156 PIRSF PIRSF005900 1 156 1.5E-43 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 VCLMA_RS07485 c031d6da74a77e4bb103da6e52ad20b4 124 SUPERFAMILY SSF52540 2 122 6.22E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07485 c031d6da74a77e4bb103da6e52ad20b4 124 PANTHER PTHR13308 5 122 2.2E-18 T 22-04-2016 VCLMA_RS07485 c031d6da74a77e4bb103da6e52ad20b4 124 Gene3D G3DSA:3.40.50.300 3 123 3.7E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07485 c031d6da74a77e4bb103da6e52ad20b4 124 PANTHER PTHR13308:SF11 5 122 2.2E-18 T 22-04-2016 VCLMA_RS07485 c031d6da74a77e4bb103da6e52ad20b4 124 Pfam PF13671 AAA domain 5 101 1.8E-14 T 22-04-2016 VCLMA_RS04150 475ead442f2029aefc26524f5bcc74e1 103 SUPERFAMILY SSF158452 2 102 2.88E-32 T 22-04-2016 IPR023376 YqcC-like domain VCLMA_RS04150 475ead442f2029aefc26524f5bcc74e1 103 Gene3D G3DSA:1.20.1440.40 3 102 2.2E-34 T 22-04-2016 IPR023376 YqcC-like domain VCLMA_RS04150 475ead442f2029aefc26524f5bcc74e1 103 Pfam PF04287 tRNA pseudouridine synthase C 8 100 1.3E-31 T 22-04-2016 IPR023376 YqcC-like domain VCLMA_RS04150 475ead442f2029aefc26524f5bcc74e1 103 PIRSF PIRSF006257 1 103 1.5E-39 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 VCLMA_RS04150 475ead442f2029aefc26524f5bcc74e1 103 PANTHER PTHR39586 2 103 9.8E-42 T 22-04-2016 VCLMA_RS09905 097411fe95f98940fa8054fcb0a1c8a1 118 Pfam PF11169 Protein of unknown function (DUF2956) 9 113 5.1E-40 T 22-04-2016 IPR021339 Protein of unknown function DUF2956 VCLMA_RS09655 5e66f87ad5e0f52180cccf52a17d6175 257 Pfam PF08907 Domain of unknown function (DUF1853) 44 229 3.3E-36 T 22-04-2016 IPR015003 Protein of unknown function DUF1853 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 SUPERFAMILY SSF55060 206 382 1.6E-51 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 Pfam PF08544 GHMP kinases C terminal 280 362 4.3E-13 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PRINTS PR00959 Mevalonate kinase family signature 120 142 7.9E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PRINTS PR00959 Mevalonate kinase family signature 163 182 7.9E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PRINTS PR00959 Mevalonate kinase family signature 329 346 7.9E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PRINTS PR00959 Mevalonate kinase family signature 26 50 7.9E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PANTHER PTHR10457 3 386 2.9E-152 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 Pfam PF10509 Galactokinase galactose-binding signature 11 59 4.6E-23 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 TIGRFAM TIGR00131 gal_kin: galactokinase 6 381 1.9E-146 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 Gene3D G3DSA:3.30.230.10 4 208 2.3E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 122 133 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PRINTS PR00473 Galactokinase signature 264 278 3.8E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PRINTS PR00473 Galactokinase signature 93 104 3.8E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PRINTS PR00473 Galactokinase signature 28 46 3.8E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PRINTS PR00473 Galactokinase signature 113 131 3.8E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PANTHER PTHR10457:SF6 3 386 2.9E-152 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 SUPERFAMILY SSF54211 2 203 1.37E-65 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 Hamap MF_00246 Galactokinase [galK]. 26 382 44.016 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 Gene3D G3DSA:3.30.70.890 209 381 5.4E-60 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 PIRSF PIRSF000530 1 385 1.5E-125 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 VCLMA_RS07395 342bdacfe2c1006ee8506fdc28cd6ff2 386 Pfam PF00288 GHMP kinases N terminal domain 115 182 5.0E-12 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 Hamap MF_00367 GTPase Era [era]. 29 321 35.579 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 PANTHER PTHR11649 17 324 1.7E-123 T 22-04-2016 VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 31 191 2.7E-37 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 Gene3D G3DSA:3.30.300.20 217 318 1.3E-38 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 SUPERFAMILY SSF54814 205 321 1.5E-40 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 PANTHER PTHR11649:SF3 17 324 1.7E-123 T 22-04-2016 VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 TIGRFAM TIGR00436 era: GTP-binding protein Era 32 304 2.2E-110 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 Pfam PF01926 50S ribosome-binding GTPase 34 148 2.0E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 Pfam PF07650 KH domain 232 309 9.0E-20 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 SUPERFAMILY SSF52540 34 229 5.95E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS11395 890ce02639d71fd77aa18e69ede1b9db 325 Gene3D G3DSA:3.40.50.300 28 216 1.3E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03105 6004c21261b9fb733a05d5e3425cd929 278 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 18 33 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VCLMA_RS03105 6004c21261b9fb733a05d5e3425cd929 278 Gene3D G3DSA:3.20.20.20 13 276 1.7E-112 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VCLMA_RS03105 6004c21261b9fb733a05d5e3425cd929 278 PANTHER PTHR20941 16 278 5.0E-128 T 22-04-2016 VCLMA_RS03105 6004c21261b9fb733a05d5e3425cd929 278 SUPERFAMILY SSF51717 10 276 1.13E-106 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 VCLMA_RS03105 6004c21261b9fb733a05d5e3425cd929 278 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 273 1.5E-106 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 VCLMA_RS03105 6004c21261b9fb733a05d5e3425cd929 278 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VCLMA_RS03105 6004c21261b9fb733a05d5e3425cd929 278 PANTHER PTHR20941:SF1 16 278 5.0E-128 T 22-04-2016 VCLMA_RS03105 6004c21261b9fb733a05d5e3425cd929 278 Pfam PF00809 Pterin binding enzyme 19 259 7.1E-91 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 VCLMA_RS04560 5ec05459eb0c188644f10d226d6fe076 149 SUPERFAMILY SSF141322 97 148 7.19E-7 T 22-04-2016 VCLMA_RS04560 5ec05459eb0c188644f10d226d6fe076 149 Gene3D G3DSA:2.40.50.140 93 148 4.3E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS04560 5ec05459eb0c188644f10d226d6fe076 149 PANTHER PTHR33507 2 149 3.6E-50 T 22-04-2016 VCLMA_RS04560 5ec05459eb0c188644f10d226d6fe076 149 PANTHER PTHR33507:SF3 2 149 3.6E-50 T 22-04-2016 VCLMA_RS04560 5ec05459eb0c188644f10d226d6fe076 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 148 5.9E-24 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 SMART SM00636 368 815 1.8E-117 T 22-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 Pfam PF14600 Cellulose-binding domain 1029 1068 3.9E-8 T 22-04-2016 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 SUPERFAMILY SSF54556 761 785 6.59E-10 T 22-04-2016 IPR029070 Chitinase insertion domain VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 SUPERFAMILY SSF54556 662 733 6.59E-10 T 22-04-2016 IPR029070 Chitinase insertion domain VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 ProSitePatterns PS01095 Chitinases family 18 active site. 504 512 - T 22-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 Gene3D G3DSA:2.60.40.1560 283 348 8.0E-5 T 22-04-2016 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 SUPERFAMILY SSF51055 1016 1070 8.63E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 SUPERFAMILY SSF51445 361 662 5.48E-77 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 SUPERFAMILY SSF51445 787 818 5.48E-77 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 PANTHER PTHR11177:SF215 441 618 1.5E-210 T 22-04-2016 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 PANTHER PTHR11177:SF215 286 422 1.5E-210 T 22-04-2016 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 PANTHER PTHR11177:SF215 635 717 1.5E-210 T 22-04-2016 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 PANTHER PTHR11177:SF215 764 922 1.5E-210 T 22-04-2016 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 Pfam PF06483 Chitinase C 824 991 3.7E-61 T 22-04-2016 IPR009470 Chitinase, C-terminal KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902|UniPathway: UPA00349 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 SMART SM00495 1026 1068 2.4E-5 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 Gene3D G3DSA:3.20.20.80 364 663 7.4E-92 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 Gene3D G3DSA:3.20.20.80 792 819 7.4E-92 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 Gene3D G3DSA:3.10.50.10 664 713 7.4E-15 T 22-04-2016 IPR029070 Chitinase insertion domain VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 Gene3D G3DSA:3.10.50.10 762 785 7.4E-15 T 22-04-2016 IPR029070 Chitinase insertion domain VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 Gene3D G3DSA:2.10.10.20 1018 1070 1.0E-16 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 Pfam PF00704 Glycosyl hydrolases family 18 369 815 1.5E-76 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 PANTHER PTHR11177 441 618 1.5E-210 T 22-04-2016 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 PANTHER PTHR11177 286 422 1.5E-210 T 22-04-2016 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 PANTHER PTHR11177 635 717 1.5E-210 T 22-04-2016 VCLMA_RS05040 dd206d27b8eac91e04e89a07dd28065d 1071 PANTHER PTHR11177 764 922 1.5E-210 T 22-04-2016 VCLMA_RS01405 56063943f4224e2c0deb9e346e50fa1c 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 6.1E-110 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VCLMA_RS01405 56063943f4224e2c0deb9e346e50fa1c 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 1.8E-104 T 22-04-2016 VCLMA_RS01405 56063943f4224e2c0deb9e346e50fa1c 295 PIRSF PIRSF000401 1 295 8.2E-103 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VCLMA_RS01405 56063943f4224e2c0deb9e346e50fa1c 295 PANTHER PTHR18895 12 291 8.4E-166 T 22-04-2016 VCLMA_RS01405 56063943f4224e2c0deb9e346e50fa1c 295 Gene3D G3DSA:3.40.50.150 99 287 3.4E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS01405 56063943f4224e2c0deb9e346e50fa1c 295 SUPERFAMILY SSF53335 43 273 8.51E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS01405 56063943f4224e2c0deb9e346e50fa1c 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.919 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VCLMA_RS01405 56063943f4224e2c0deb9e346e50fa1c 295 PANTHER PTHR18895:SF69 12 291 8.4E-166 T 22-04-2016 VCLMA_RS00485 5201e325fe7ff337083eb6f932396137 284 Pfam PF01040 UbiA prenyltransferase family 24 266 7.2E-68 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VCLMA_RS00485 5201e325fe7ff337083eb6f932396137 284 PANTHER PTHR11048 5 284 7.6E-92 T 22-04-2016 VCLMA_RS00485 5201e325fe7ff337083eb6f932396137 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 8 283 4.0E-106 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 VCLMA_RS00485 5201e325fe7ff337083eb6f932396137 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.694 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 PANTHER PTHR30023:SF0 1 470 5.3E-112 T 22-04-2016 VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 Gene3D G3DSA:3.40.710.10 222 449 9.5E-58 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 PANTHER PTHR30023 1 470 5.3E-112 T 22-04-2016 VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 29 442 1.8E-97 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 SUPERFAMILY SSF56601 29 444 6.19E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 340 354 5.59E-27 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 281 303 5.59E-27 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 63 82 5.59E-27 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 355 369 5.59E-27 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 419 432 5.59E-27 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VCLMA_RS03075 0127839649b490e3a8a9206edbf0c16f 481 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 61 441 2.0E-97 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VCLMA_RS12335 7e41f4cd463ae39bee423fd5aa1cbeb8 179 SUPERFAMILY SSF46785 3 178 2.08E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12335 7e41f4cd463ae39bee423fd5aa1cbeb8 179 Pfam PF10400 Virulence activator alpha C-term 92 175 4.9E-14 T 22-04-2016 IPR018309 Transcription regulator PadR, C-terminal VCLMA_RS12335 7e41f4cd463ae39bee423fd5aa1cbeb8 179 PANTHER PTHR33169:SF4 1 178 7.8E-73 T 22-04-2016 VCLMA_RS12335 7e41f4cd463ae39bee423fd5aa1cbeb8 179 PANTHER PTHR33169 1 178 7.8E-73 T 22-04-2016 VCLMA_RS12335 7e41f4cd463ae39bee423fd5aa1cbeb8 179 Gene3D G3DSA:1.10.10.10 1 87 8.6E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12335 7e41f4cd463ae39bee423fd5aa1cbeb8 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 5.7E-16 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal VCLMA_RS06760 b642db729ca73a21ff412951ed5552a9 224 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 8 210 2.5E-56 T 22-04-2016 VCLMA_RS06760 b642db729ca73a21ff412951ed5552a9 224 PANTHER PTHR42208 1 223 7.1E-77 T 22-04-2016 VCLMA_RS06760 b642db729ca73a21ff412951ed5552a9 224 PANTHER PTHR42208:SF1 1 223 7.1E-77 T 22-04-2016 VCLMA_RS08505 e3035a8e40dbdab371ca0f2990633619 344 Pfam PF13609 Gram-negative porin 7 311 3.0E-23 T 22-04-2016 VCLMA_RS08505 e3035a8e40dbdab371ca0f2990633619 344 Gene3D G3DSA:2.40.160.10 29 342 1.4E-33 T 22-04-2016 IPR023614 Porin domain VCLMA_RS08505 e3035a8e40dbdab371ca0f2990633619 344 SUPERFAMILY SSF56935 20 344 7.99E-41 T 22-04-2016 VCLMA_RS06165 00aa757c8cca67c9506304933b4ad76f 457 PANTHER PTHR38605:SF1 1 457 2.0E-257 T 22-04-2016 VCLMA_RS06165 00aa757c8cca67c9506304933b4ad76f 457 PANTHER PTHR38605 1 457 2.0E-257 T 22-04-2016 VCLMA_RS06165 00aa757c8cca67c9506304933b4ad76f 457 PIRSF PIRSF019381 1 457 2.9E-196 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VCLMA_RS06165 00aa757c8cca67c9506304933b4ad76f 457 Pfam PF04317 YcjX-like family, DUF463 20 456 7.6E-185 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein VCLMA_RS10450 7d7da9c8c82940220f2715be149c74c3 169 SUPERFAMILY SSF111384 26 168 1.31E-31 T 22-04-2016 IPR024930 Skp domain VCLMA_RS10450 7d7da9c8c82940220f2715be149c74c3 169 PANTHER PTHR35089:SF1 2 168 6.6E-54 T 22-04-2016 VCLMA_RS10450 7d7da9c8c82940220f2715be149c74c3 169 Pfam PF03938 Outer membrane protein (OmpH-like) 13 167 1.3E-25 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VCLMA_RS10450 7d7da9c8c82940220f2715be149c74c3 169 PIRSF PIRSF002094 1 169 5.1E-40 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VCLMA_RS10450 7d7da9c8c82940220f2715be149c74c3 169 Gene3D G3DSA:3.30.910.20 17 68 1.9E-32 T 22-04-2016 VCLMA_RS10450 7d7da9c8c82940220f2715be149c74c3 169 Gene3D G3DSA:3.30.910.20 106 169 1.9E-32 T 22-04-2016 VCLMA_RS10450 7d7da9c8c82940220f2715be149c74c3 169 PANTHER PTHR35089 2 168 6.6E-54 T 22-04-2016 VCLMA_RS10450 7d7da9c8c82940220f2715be149c74c3 169 SMART SM00935 15 169 5.1E-43 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 Pfam PF00691 OmpA family 118 212 1.1E-20 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 Gene3D G3DSA:3.30.1330.60 106 220 2.7E-36 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 Pfam PF13488 Glycine zipper 38 86 2.3E-12 T 22-04-2016 VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 2.7E-5 T 22-04-2016 VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 2.7E-5 T 22-04-2016 VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 2.7E-5 T 22-04-2016 VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 PANTHER PTHR30128 24 222 3.5E-59 T 22-04-2016 VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 SUPERFAMILY SSF103088 106 221 1.83E-36 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01021 OMPA domain signature 148 163 3.1E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS05625 c525834c63242e05d292d9c21fa55cd6 222 PRINTS PR01021 OMPA domain signature 163 179 3.1E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS02295 13936eb7ebd423f4a4cdf5bbed30ec71 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 46.925 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VCLMA_RS02295 13936eb7ebd423f4a4cdf5bbed30ec71 306 Gene3D G3DSA:3.40.710.10 2 306 1.4E-124 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS02295 13936eb7ebd423f4a4cdf5bbed30ec71 306 Pfam PF04960 Glutaminase 22 306 2.7E-112 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VCLMA_RS02295 13936eb7ebd423f4a4cdf5bbed30ec71 306 SUPERFAMILY SSF56601 4 306 2.47E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like VCLMA_RS02295 13936eb7ebd423f4a4cdf5bbed30ec71 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 3.8E-130 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VCLMA_RS02295 13936eb7ebd423f4a4cdf5bbed30ec71 306 PANTHER PTHR12544 6 306 8.0E-160 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 VCLMA_RS01250 10943324363b810adfbfdab5166559ee 370 Gene3D G3DSA:3.40.50.2000 193 344 5.0E-18 T 22-04-2016 VCLMA_RS01250 10943324363b810adfbfdab5166559ee 370 Pfam PF13439 Glycosyltransferase Family 4 16 171 2.3E-15 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VCLMA_RS01250 10943324363b810adfbfdab5166559ee 370 Pfam PF00534 Glycosyl transferases group 1 180 344 3.1E-35 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 VCLMA_RS01250 10943324363b810adfbfdab5166559ee 370 PANTHER PTHR12526:SF301 1 366 2.1E-103 T 22-04-2016 VCLMA_RS01250 10943324363b810adfbfdab5166559ee 370 PANTHER PTHR12526 1 366 2.1E-103 T 22-04-2016 VCLMA_RS01250 10943324363b810adfbfdab5166559ee 370 SUPERFAMILY SSF53756 1 365 2.2E-69 T 22-04-2016 VCLMA_RS03390 ba4ab61a071c484ce1c8f6a926af0c42 123 SUPERFAMILY SSF141371 1 118 3.14E-33 T 22-04-2016 VCLMA_RS03390 ba4ab61a071c484ce1c8f6a926af0c42 123 Pfam PF07238 PilZ domain 3 100 5.3E-14 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VCLMA_RS03390 ba4ab61a071c484ce1c8f6a926af0c42 123 PIRSF PIRSF028141 1 120 1.8E-38 T 22-04-2016 IPR027021 Cyclic di-GMP binding protein, PA4608 type VCLMA_RS03390 ba4ab61a071c484ce1c8f6a926af0c42 123 Gene3D G3DSA:2.40.10.220 1 119 1.2E-45 T 22-04-2016 VCLMA_RS06795 5253eb03912af06ee907a3413bfc0855 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 9 466 2.7E-229 T 22-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VCLMA_RS06795 5253eb03912af06ee907a3413bfc0855 475 PANTHER PTHR10422 3 466 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VCLMA_RS06795 5253eb03912af06ee907a3413bfc0855 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VCLMA_RS06795 5253eb03912af06ee907a3413bfc0855 475 Gene3D G3DSA:1.20.210.10 9 466 5.6E-72 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VCLMA_RS06795 5253eb03912af06ee907a3413bfc0855 475 SUPERFAMILY SSF81442 11 465 8.63E-123 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VCLMA_RS06795 5253eb03912af06ee907a3413bfc0855 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 6.1E-115 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 VCLMA_RS06795 5253eb03912af06ee907a3413bfc0855 475 PANTHER PTHR10422:SF21 3 466 0.0 T 22-04-2016 VCLMA_RS05200 a3f4cf82768e298279745161b7811cac 206 PANTHER PTHR33747 9 206 2.8E-38 T 22-04-2016 VCLMA_RS05200 a3f4cf82768e298279745161b7811cac 206 Pfam PF02810 SEC-C motif 188 206 2.0E-9 T 22-04-2016 IPR004027 SEC-C motif VCLMA_RS05200 a3f4cf82768e298279745161b7811cac 206 Gene3D G3DSA:3.10.450.50 155 206 1.0E-11 T 22-04-2016 IPR032710 NTF2-like domain VCLMA_RS05200 a3f4cf82768e298279745161b7811cac 206 SUPERFAMILY SSF103642 186 205 6.87E-7 T 22-04-2016 VCLMA_RS05200 a3f4cf82768e298279745161b7811cac 206 PANTHER PTHR33747:SF1 9 206 2.8E-38 T 22-04-2016 VCLMA_RS05200 a3f4cf82768e298279745161b7811cac 206 Pfam PF03695 Uncharacterised protein family (UPF0149) 10 153 5.4E-8 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VCLMA_RS09675 885c794724e5258048d82609b11317eb 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 3.8E-19 T 22-04-2016 IPR021249 Protein of unknown function DUF2788 VCLMA_RS11865 2a3844b5399edd54b01e1b5ce515a365 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 6.0E-100 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VCLMA_RS11865 2a3844b5399edd54b01e1b5ce515a365 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 1.5E-76 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VCLMA_RS11865 2a3844b5399edd54b01e1b5ce515a365 183 Gene3D G3DSA:3.40.30.10 10 176 3.1E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS06580 ecabdd5956120912ad23b113ca89d6f7 126 SMART SM00448 3 117 2.9E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06580 ecabdd5956120912ad23b113ca89d6f7 126 PANTHER PTHR26402 3 121 1.5E-37 T 22-04-2016 VCLMA_RS06580 ecabdd5956120912ad23b113ca89d6f7 126 Gene3D G3DSA:3.40.50.2300 3 122 7.8E-36 T 22-04-2016 VCLMA_RS06580 ecabdd5956120912ad23b113ca89d6f7 126 Pfam PF00072 Response regulator receiver domain 5 117 3.4E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS06580 ecabdd5956120912ad23b113ca89d6f7 126 SUPERFAMILY SSF52172 3 122 3.98E-34 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS08340 0dff8610314388567c742491f9800578 506 Gene3D G3DSA:3.40.309.10 271 469 2.2E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 VCLMA_RS08340 0dff8610314388567c742491f9800578 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 VCLMA_RS08340 0dff8610314388567c742491f9800578 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 VCLMA_RS08340 0dff8610314388567c742491f9800578 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 VCLMA_RS08340 0dff8610314388567c742491f9800578 506 SUPERFAMILY SSF53720 12 497 4.84E-163 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 VCLMA_RS08340 0dff8610314388567c742491f9800578 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 VCLMA_RS08340 0dff8610314388567c742491f9800578 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 7.1E-166 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS08340 0dff8610314388567c742491f9800578 506 Gene3D G3DSA:3.40.605.10 18 270 4.6E-92 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 VCLMA_RS12925 80f6b8727687cfd35ab4d7ed393fc873 301 PANTHER PTHR30126 1 299 2.3E-169 T 22-04-2016 VCLMA_RS12925 80f6b8727687cfd35ab4d7ed393fc873 301 Gene3D G3DSA:3.40.190.10 206 255 2.1E-8 T 22-04-2016 VCLMA_RS12925 80f6b8727687cfd35ab4d7ed393fc873 301 Gene3D G3DSA:1.10.10.10 6 86 4.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12925 80f6b8727687cfd35ab4d7ed393fc873 301 PANTHER PTHR30126:SF18 1 299 2.3E-169 T 22-04-2016 VCLMA_RS12925 80f6b8727687cfd35ab4d7ed393fc873 301 Pfam PF03466 LysR substrate binding domain 89 288 4.0E-20 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS12925 80f6b8727687cfd35ab4d7ed393fc873 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 1.6E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS12925 80f6b8727687cfd35ab4d7ed393fc873 301 Gene3D G3DSA:3.40.190.10 102 200 5.7E-7 T 22-04-2016 VCLMA_RS12925 80f6b8727687cfd35ab4d7ed393fc873 301 SUPERFAMILY SSF46785 5 86 1.09E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12925 80f6b8727687cfd35ab4d7ed393fc873 301 SUPERFAMILY SSF53850 89 288 1.32E-22 T 22-04-2016 VCLMA_RS15265 a10a52243bda5e0dfaf47ab3ea4c56e5 217 Pfam PF11873 Domain of unknown function (DUF3393) 1 86 4.8E-35 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal VCLMA_RS15265 a10a52243bda5e0dfaf47ab3ea4c56e5 217 PANTHER PTHR21666 70 216 8.2E-43 T 22-04-2016 VCLMA_RS15265 a10a52243bda5e0dfaf47ab3ea4c56e5 217 Gene3D G3DSA:1.10.530.10 61 211 2.5E-38 T 22-04-2016 VCLMA_RS15265 a10a52243bda5e0dfaf47ab3ea4c56e5 217 Pfam PF01464 Transglycosylase SLT domain 91 213 4.8E-29 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 VCLMA_RS15265 a10a52243bda5e0dfaf47ab3ea4c56e5 217 SUPERFAMILY SSF53955 55 209 9.78E-34 T 22-04-2016 IPR023346 Lysozyme-like domain VCLMA_RS15265 a10a52243bda5e0dfaf47ab3ea4c56e5 217 PANTHER PTHR21666:SF224 70 216 8.2E-43 T 22-04-2016 VCLMA_RS15265 a10a52243bda5e0dfaf47ab3ea4c56e5 217 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 108 136 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VCLMA_RS11820 820e8cdfdf1c9d014012d0f79498fb06 209 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 5 202 35.269 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VCLMA_RS11820 820e8cdfdf1c9d014012d0f79498fb06 209 PANTHER PTHR30108:SF2 77 206 1.3E-84 T 22-04-2016 VCLMA_RS11820 820e8cdfdf1c9d014012d0f79498fb06 209 PANTHER PTHR30108:SF2 1 60 1.3E-84 T 22-04-2016 VCLMA_RS11820 820e8cdfdf1c9d014012d0f79498fb06 209 SUPERFAMILY SSF52507 5 201 1.83E-57 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VCLMA_RS11820 820e8cdfdf1c9d014012d0f79498fb06 209 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 7 200 1.9E-57 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 VCLMA_RS11820 820e8cdfdf1c9d014012d0f79498fb06 209 Gene3D G3DSA:3.40.50.1950 6 204 1.0E-75 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VCLMA_RS11820 820e8cdfdf1c9d014012d0f79498fb06 209 PANTHER PTHR30108 77 206 1.3E-84 T 22-04-2016 VCLMA_RS11820 820e8cdfdf1c9d014012d0f79498fb06 209 PANTHER PTHR30108 1 60 1.3E-84 T 22-04-2016 VCLMA_RS11820 820e8cdfdf1c9d014012d0f79498fb06 209 Pfam PF02441 Flavoprotein 6 143 5.2E-23 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VCLMA_RS11305 3142941e9694b39afcc711116847519f 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 3.4E-68 T 22-04-2016 IPR002727 Protein of unknown function DUF47 VCLMA_RS11305 3142941e9694b39afcc711116847519f 226 PANTHER PTHR36536 1 226 1.2E-141 T 22-04-2016 VCLMA_RS11305 3142941e9694b39afcc711116847519f 226 PANTHER PTHR36536:SF3 1 226 1.2E-141 T 22-04-2016 VCLMA_RS11305 3142941e9694b39afcc711116847519f 226 SUPERFAMILY SSF109755 31 216 2.09E-15 T 22-04-2016 VCLMA_RS11305 3142941e9694b39afcc711116847519f 226 Pfam PF01865 Protein of unknown function DUF47 7 223 1.7E-65 T 22-04-2016 IPR018445 Putative phosphate transport regulator VCLMA_RS07580 0484fa5d1d45885f0683d7f0c62454fc 458 PANTHER PTHR11206 12 458 2.7E-285 T 22-04-2016 VCLMA_RS07580 0484fa5d1d45885f0683d7f0c62454fc 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 422 7.2E-63 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS07580 0484fa5d1d45885f0683d7f0c62454fc 458 PANTHER PTHR11206:SF146 12 458 2.7E-285 T 22-04-2016 VCLMA_RS07580 0484fa5d1d45885f0683d7f0c62454fc 458 Pfam PF01554 MatE 25 185 1.2E-28 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS07580 0484fa5d1d45885f0683d7f0c62454fc 458 Pfam PF01554 MatE 252 413 9.1E-17 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS07580 0484fa5d1d45885f0683d7f0c62454fc 458 PIRSF PIRSF006603 8 458 2.8E-67 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS10905 b944a3f7da02c90b8c91e985b8837d2c 274 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 13 21 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VCLMA_RS10905 b944a3f7da02c90b8c91e985b8837d2c 274 PIRSF PIRSF005902 7 269 5.6E-67 T 22-04-2016 IPR001130 TatD family GO:0016788 VCLMA_RS10905 b944a3f7da02c90b8c91e985b8837d2c 274 PANTHER PTHR10060 1 268 2.7E-90 T 22-04-2016 IPR001130 TatD family GO:0016788 VCLMA_RS10905 b944a3f7da02c90b8c91e985b8837d2c 274 SUPERFAMILY SSF51556 13 266 3.74E-74 T 22-04-2016 IPR032466 Metal-dependent hydrolase VCLMA_RS10905 b944a3f7da02c90b8c91e985b8837d2c 274 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 201 217 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VCLMA_RS10905 b944a3f7da02c90b8c91e985b8837d2c 274 Pfam PF01026 TatD related DNase 14 264 1.0E-68 T 22-04-2016 IPR001130 TatD family GO:0016788 VCLMA_RS10905 b944a3f7da02c90b8c91e985b8837d2c 274 Gene3D G3DSA:3.20.20.140 6 266 4.8E-77 T 22-04-2016 VCLMA_RS01150 d86276bfc4a937edbaeb0ac5388dddcc 590 Gene3D G3DSA:3.20.20.370 396 543 1.7E-32 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VCLMA_RS01150 d86276bfc4a937edbaeb0ac5388dddcc 590 SUPERFAMILY SSF53756 10 336 9.42E-35 T 22-04-2016 VCLMA_RS01150 d86276bfc4a937edbaeb0ac5388dddcc 590 PANTHER PTHR34216 291 588 2.1E-59 T 22-04-2016 VCLMA_RS01150 d86276bfc4a937edbaeb0ac5388dddcc 590 SUPERFAMILY SSF88713 366 563 2.0E-40 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VCLMA_RS01150 d86276bfc4a937edbaeb0ac5388dddcc 590 Pfam PF01522 Polysaccharide deacetylase 405 541 1.3E-33 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 VCLMA_RS01150 d86276bfc4a937edbaeb0ac5388dddcc 590 Pfam PF13439 Glycosyltransferase Family 4 13 158 4.1E-23 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain VCLMA_RS06550 7668cf7bee1e23b731150f3f6f85ec17 59 PANTHER PTHR37463:SF1 1 59 3.8E-29 T 22-04-2016 VCLMA_RS06550 7668cf7bee1e23b731150f3f6f85ec17 59 PANTHER PTHR37463 1 59 3.8E-29 T 22-04-2016 VCLMA_RS06550 7668cf7bee1e23b731150f3f6f85ec17 59 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 5 44 1.2E-21 T 22-04-2016 IPR017136 Uncharacterised conserved protein UCP037205 VCLMA_RS05925 fb99c86f2896c4b8a5d43557863e4c29 235 Gene3D G3DSA:3.40.50.150 23 220 1.3E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05925 fb99c86f2896c4b8a5d43557863e4c29 235 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 9 235 38.37 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VCLMA_RS05925 fb99c86f2896c4b8a5d43557863e4c29 235 PANTHER PTHR10108:SF910 5 233 4.9E-160 T 22-04-2016 VCLMA_RS05925 fb99c86f2896c4b8a5d43557863e4c29 235 SUPERFAMILY SSF53335 15 231 4.66E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05925 fb99c86f2896c4b8a5d43557863e4c29 235 Pfam PF13489 Methyltransferase domain 52 196 4.8E-26 T 22-04-2016 VCLMA_RS05925 fb99c86f2896c4b8a5d43557863e4c29 235 PANTHER PTHR10108 5 233 4.9E-160 T 22-04-2016 VCLMA_RS05925 fb99c86f2896c4b8a5d43557863e4c29 235 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 229 8.4E-88 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 VCLMA_RS03640 63637309e2c84f2ad4ec526a85ebff1b 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 2.3E-37 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 VCLMA_RS03640 63637309e2c84f2ad4ec526a85ebff1b 107 PANTHER PTHR10072:SF48 1 107 1.5E-51 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 VCLMA_RS03640 63637309e2c84f2ad4ec526a85ebff1b 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site VCLMA_RS03640 63637309e2c84f2ad4ec526a85ebff1b 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 8.1E-25 T 22-04-2016 IPR000361 FeS cluster biogenesis VCLMA_RS03640 63637309e2c84f2ad4ec526a85ebff1b 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 4.2E-57 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 VCLMA_RS03640 63637309e2c84f2ad4ec526a85ebff1b 107 PANTHER PTHR10072 1 107 1.5E-51 T 22-04-2016 VCLMA_RS03640 63637309e2c84f2ad4ec526a85ebff1b 107 SUPERFAMILY SSF89360 1 96 6.67E-33 T 22-04-2016 IPR000361 FeS cluster biogenesis VCLMA_RS03640 63637309e2c84f2ad4ec526a85ebff1b 107 Gene3D G3DSA:2.60.300.12 2 97 5.9E-35 T 22-04-2016 IPR000361 FeS cluster biogenesis VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 Gene3D G3DSA:3.30.300.30 434 534 3.0E-30 T 22-04-2016 VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 191 202 - T 22-04-2016 IPR020845 AMP-binding, conserved site VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 Gene3D G3DSA:3.40.50.980 195 355 1.7E-38 T 22-04-2016 VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 PANTHER PTHR24095:SF123 1 534 8.0E-278 T 22-04-2016 VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 Gene3D G3DSA:2.30.38.10 358 433 1.1E-16 T 22-04-2016 VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 PANTHER PTHR24095 1 534 8.0E-278 T 22-04-2016 VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 531 8.6E-283 T 22-04-2016 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 SUPERFAMILY SSF56801 6 534 1.44E-133 T 22-04-2016 VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 Gene3D G3DSA:3.40.50.980 25 194 2.0E-29 T 22-04-2016 VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 Pfam PF00501 AMP-binding enzyme 31 439 8.1E-77 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS03750 396d02fc320708d6676f080f8ea578c3 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 524 2.8E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain VCLMA_RS08985 46abc562effdec0b815841594711fe16 91 PANTHER PTHR38109 2 66 1.2E-24 T 22-04-2016 VCLMA_RS08985 46abc562effdec0b815841594711fe16 91 Hamap MF_01866 Protein YcgL [ycgL]. 1 90 19.827 T 22-04-2016 IPR027354 YcgL domain VCLMA_RS08985 46abc562effdec0b815841594711fe16 91 SUPERFAMILY SSF160191 1 66 2.35E-25 T 22-04-2016 VCLMA_RS08985 46abc562effdec0b815841594711fe16 91 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 69 3.0E-30 T 22-04-2016 IPR027354 YcgL domain VCLMA_RS08985 46abc562effdec0b815841594711fe16 91 Pfam PF05166 YcgL domain 3 66 2.7E-25 T 22-04-2016 IPR027354 YcgL domain VCLMA_RS04790 04abb1452f3a97f5716acf814601df71 113 Pfam PF01627 Hpt domain 25 103 1.8E-8 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS04790 04abb1452f3a97f5716acf814601df71 113 Gene3D G3DSA:1.20.120.160 3 112 2.1E-25 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS04790 04abb1452f3a97f5716acf814601df71 113 SUPERFAMILY SSF47226 3 111 8.24E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS01850 4cacad188da0fd27d1a7f4f806f27bf7 254 Pfam PF04338 Protein of unknown function, DUF481 39 254 2.1E-51 T 22-04-2016 IPR007433 Protein of unknown function DUF481 VCLMA_RS01850 4cacad188da0fd27d1a7f4f806f27bf7 254 SUPERFAMILY SSF56935 16 194 2.65E-5 T 22-04-2016 VCLMA_RS01850 4cacad188da0fd27d1a7f4f806f27bf7 254 Gene3D G3DSA:2.40.160.10 39 134 1.8E-4 T 22-04-2016 IPR023614 Porin domain VCLMA_RS04390 72dce45429fbf301c5c42fb18b3ee735 198 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 3.5E-33 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT VCLMA_RS04390 72dce45429fbf301c5c42fb18b3ee735 198 PANTHER PTHR33545 1 198 2.2E-68 T 22-04-2016 VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.9E-38 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 Gene3D G3DSA:3.40.50.20 1 129 4.1E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 443 1.9E-243 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.3E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.7E-86 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 Gene3D G3DSA:3.30.470.20 204 442 6.6E-101 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 SUPERFAMILY SSF52440 1 113 3.81E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 SUPERFAMILY SSF51246 331 443 1.05E-42 T 22-04-2016 IPR011054 Rudiment single hybrid motif VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 Gene3D G3DSA:3.30.1490.20 130 203 2.0E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 SUPERFAMILY SSF56059 83 346 8.25E-70 T 22-04-2016 VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 PANTHER PTHR18866 1 441 0.0 T 22-04-2016 VCLMA_RS01410 d4c87ab1f2981e0821135de9758512c8 447 SMART SM00878 336 441 6.8E-66 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal VCLMA_RS08960 12fcfd3124f4bb545e97e6394cc009a7 364 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 4 174 2.4E-65 T 22-04-2016 IPR005126 NapC/NirT cytochrome c, N-terminal VCLMA_RS08960 12fcfd3124f4bb545e97e6394cc009a7 364 Gene3D G3DSA:1.10.3820.10 311 317 7.9E-27 T 22-04-2016 VCLMA_RS08960 12fcfd3124f4bb545e97e6394cc009a7 364 Gene3D G3DSA:1.10.3820.10 4 176 7.9E-27 T 22-04-2016 VCLMA_RS08960 12fcfd3124f4bb545e97e6394cc009a7 364 PANTHER PTHR30333:SF3 1 363 4.4E-243 T 22-04-2016 VCLMA_RS08960 12fcfd3124f4bb545e97e6394cc009a7 364 SUPERFAMILY SSF48695 11 176 4.0E-47 T 22-04-2016 IPR011031 Multihaem cytochrome VCLMA_RS08960 12fcfd3124f4bb545e97e6394cc009a7 364 PANTHER PTHR30333 1 363 4.4E-243 T 22-04-2016 VCLMA_RS08960 12fcfd3124f4bb545e97e6394cc009a7 364 PIRSF PIRSF000014 1 364 9.1E-161 T 22-04-2016 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VCLMA_RS00395 10adeacc845785fd85c188e2fd6b0c92 141 Pfam PF00582 Universal stress protein family 3 138 6.6E-21 T 22-04-2016 IPR006016 UspA GO:0006950 VCLMA_RS00395 10adeacc845785fd85c188e2fd6b0c92 141 SUPERFAMILY SSF52402 3 139 6.2E-32 T 22-04-2016 VCLMA_RS00395 10adeacc845785fd85c188e2fd6b0c92 141 PIRSF PIRSF006276 1 141 5.8E-52 T 22-04-2016 IPR006015 Universal stress protein A VCLMA_RS00395 10adeacc845785fd85c188e2fd6b0c92 141 Gene3D G3DSA:3.40.50.620 3 139 3.1E-29 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS03905 72f77673704fee2297de4ec5d4dee487 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.5E-12 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 VCLMA_RS03905 72f77673704fee2297de4ec5d4dee487 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.5E-12 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 VCLMA_RS03905 72f77673704fee2297de4ec5d4dee487 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.5E-12 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 VCLMA_RS03905 72f77673704fee2297de4ec5d4dee487 107 SUPERFAMILY SSF54862 3 100 4.61E-23 T 22-04-2016 VCLMA_RS03905 72f77673704fee2297de4ec5d4dee487 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 9.5E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCLMA_RS03905 72f77673704fee2297de4ec5d4dee487 107 Gene3D G3DSA:3.30.70.20 3 103 8.0E-22 T 22-04-2016 VCLMA_RS03905 72f77673704fee2297de4ec5d4dee487 107 Pfam PF11953 Domain of unknown function (DUF3470) 68 107 4.0E-19 T 22-04-2016 IPR022569 Ferredoxin, C-terminal VCLMA_RS03905 72f77673704fee2297de4ec5d4dee487 107 PANTHER PTHR11938 1 91 5.2E-54 T 22-04-2016 VCLMA_RS03905 72f77673704fee2297de4ec5d4dee487 107 PANTHER PTHR11938:SF101 1 91 5.2E-54 T 22-04-2016 VCLMA_RS09570 2cdceb87b8b4e5097ef65f9928d7e0bb 76 SUPERFAMILY SSF46785 2 50 4.49E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09570 2cdceb87b8b4e5097ef65f9928d7e0bb 76 Pfam PF09012 FeoC like transcriptional regulator 2 49 2.9E-11 T 22-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC VCLMA_RS11125 0957940ef2bf817cec3efea6d5c5827f 398 Pfam PF01098 Cell cycle protein 26 381 3.7E-115 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VCLMA_RS11125 0957940ef2bf817cec3efea6d5c5827f 398 PANTHER PTHR30474:SF2 3 398 1.4E-185 T 22-04-2016 VCLMA_RS11125 0957940ef2bf817cec3efea6d5c5827f 398 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 VCLMA_RS11125 0957940ef2bf817cec3efea6d5c5827f 398 PANTHER PTHR30474 3 398 1.4E-185 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 VCLMA_RS11125 0957940ef2bf817cec3efea6d5c5827f 398 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 22 389 41.381 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VCLMA_RS11125 0957940ef2bf817cec3efea6d5c5827f 398 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.9E-130 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 VCLMA_RS07570 45ae4cd02faafcc8613284e75c799c2a 817 PANTHER PTHR30489 215 816 0.0 T 22-04-2016 VCLMA_RS07570 45ae4cd02faafcc8613284e75c799c2a 817 PANTHER PTHR30489 1 186 0.0 T 22-04-2016 VCLMA_RS07570 45ae4cd02faafcc8613284e75c799c2a 817 Pfam PF02687 FtsX-like permease family 693 809 3.8E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VCLMA_RS07570 45ae4cd02faafcc8613284e75c799c2a 817 Pfam PF02687 FtsX-like permease family 244 368 2.7E-13 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VCLMA_RS07570 45ae4cd02faafcc8613284e75c799c2a 817 PANTHER PTHR30489:SF6 215 816 0.0 T 22-04-2016 VCLMA_RS07570 45ae4cd02faafcc8613284e75c799c2a 817 PANTHER PTHR30489:SF6 1 186 0.0 T 22-04-2016 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 SUPERFAMILY SSF54713 55 137 4.14E-19 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 Hamap MF_00050 Elongation factor Ts [tsf]. 1 279 75.483 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 279 6.0E-103 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 Pfam PF00889 Elongation factor TS 70 260 2.3E-60 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 SUPERFAMILY SSF46934 3 53 1.53E-18 T 22-04-2016 IPR009060 UBA-like GO:0005515 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:1.10.8.10 1 54 1.0E-27 T 22-04-2016 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:3.30.479.20 225 263 3.2E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:3.30.479.20 56 92 3.2E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:3.30.479.20 164 179 3.2E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 PANTHER PTHR11741 1 280 3.3E-125 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 Gene3D G3DSA:1.10.286.20 180 224 1.2E-19 T 22-04-2016 VCLMA_RS10490 0a8ddd0c44f1df7f094e5627cc078ef4 280 SUPERFAMILY SSF54713 141 277 8.24E-44 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 VCLMA_RS13845 3e9f7d78c2093cb7317d138012e15e58 402 Gene3D G3DSA:1.10.3470.10 6 195 1.4E-38 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS13845 3e9f7d78c2093cb7317d138012e15e58 402 Gene3D G3DSA:1.10.3470.10 207 399 3.1E-37 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS13845 3e9f7d78c2093cb7317d138012e15e58 402 SUPERFAMILY SSF81345 5 192 1.24E-34 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS13845 3e9f7d78c2093cb7317d138012e15e58 402 PANTHER PTHR30472 111 402 3.6E-111 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS13845 3e9f7d78c2093cb7317d138012e15e58 402 PANTHER PTHR30472:SF16 111 402 3.6E-111 T 22-04-2016 VCLMA_RS13845 3e9f7d78c2093cb7317d138012e15e58 402 SUPERFAMILY SSF81345 205 399 3.4E-32 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS13845 3e9f7d78c2093cb7317d138012e15e58 402 Pfam PF01032 FecCD transport family 5 192 9.1E-36 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS13845 3e9f7d78c2093cb7317d138012e15e58 402 Pfam PF01032 FecCD transport family 240 400 9.6E-34 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS10835 c8465baeb4c154f60b17bf3b598e30c8 380 PIRSF PIRSF004810 1 380 2.6E-112 T 22-04-2016 IPR014047 Chromate transporter, long chain VCLMA_RS10835 c8465baeb4c154f60b17bf3b598e30c8 380 PANTHER PTHR33567 1 380 1.1E-135 T 22-04-2016 VCLMA_RS10835 c8465baeb4c154f60b17bf3b598e30c8 380 PANTHER PTHR33567:SF3 1 380 1.1E-135 T 22-04-2016 VCLMA_RS10835 c8465baeb4c154f60b17bf3b598e30c8 380 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 374 5.6E-88 T 22-04-2016 IPR014047 Chromate transporter, long chain VCLMA_RS10835 c8465baeb4c154f60b17bf3b598e30c8 380 Pfam PF02417 Chromate transporter 211 371 8.7E-34 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VCLMA_RS10835 c8465baeb4c154f60b17bf3b598e30c8 380 Pfam PF02417 Chromate transporter 3 168 6.5E-33 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 VCLMA_RS03695 853be68df7609baf1f55a637a56dd9da 204 SUPERFAMILY SSF48452 90 188 1.22E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS03695 853be68df7609baf1f55a637a56dd9da 204 PANTHER PTHR38035 2 204 2.2E-91 T 22-04-2016 VCLMA_RS03695 853be68df7609baf1f55a637a56dd9da 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.2E-56 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain VCLMA_RS03695 853be68df7609baf1f55a637a56dd9da 204 Gene3D G3DSA:1.25.40.10 83 188 5.0E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS03695 853be68df7609baf1f55a637a56dd9da 204 PIRSF PIRSF006170 1 204 1.1E-52 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 VCLMA_RS06940 b7f9199070ec3f68c80372cfbd06e1fa 208 PANTHER PTHR38106:SF1 1 208 1.1E-85 T 22-04-2016 VCLMA_RS06940 b7f9199070ec3f68c80372cfbd06e1fa 208 SMART SM00945 5 119 3.4E-60 T 22-04-2016 IPR016103 ProQ/FinO domain VCLMA_RS06940 b7f9199070ec3f68c80372cfbd06e1fa 208 Gene3D G3DSA:1.10.1710.10 3 117 9.4E-37 T 22-04-2016 IPR016103 ProQ/FinO domain VCLMA_RS06940 b7f9199070ec3f68c80372cfbd06e1fa 208 SUPERFAMILY SSF48657 5 118 4.45E-39 T 22-04-2016 IPR016103 ProQ/FinO domain VCLMA_RS06940 b7f9199070ec3f68c80372cfbd06e1fa 208 Pfam PF04352 ProQ/FINO family 8 115 2.0E-42 T 22-04-2016 IPR016103 ProQ/FinO domain VCLMA_RS06940 b7f9199070ec3f68c80372cfbd06e1fa 208 PANTHER PTHR38106 1 208 1.1E-85 T 22-04-2016 VCLMA_RS06940 b7f9199070ec3f68c80372cfbd06e1fa 208 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 208 30.062 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VCLMA_RS12085 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 1.3E-65 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12085 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 5.0E-76 T 22-04-2016 IPR013005 50S ribosomal protein uL4 VCLMA_RS12085 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 PANTHER PTHR10746 10 199 1.7E-93 T 22-04-2016 IPR013005 50S ribosomal protein uL4 VCLMA_RS12085 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Gene3D G3DSA:3.40.1370.10 52 200 1.3E-59 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12085 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 SUPERFAMILY SSF52166 8 199 7.46E-74 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12085 e3ba5fe6e6dd088bb25a5aa5e7de3ce3 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 3 200 33.953 T 22-04-2016 IPR013005 50S ribosomal protein uL4 VCLMA_RS03620 aa1ff9063d94f6abba939e1ed1b10f13 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 239 8.4E-83 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VCLMA_RS03620 aa1ff9063d94f6abba939e1ed1b10f13 243 PIRSF PIRSF004808 1 243 8.5E-73 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 VCLMA_RS03620 aa1ff9063d94f6abba939e1ed1b10f13 243 PANTHER PTHR12029 7 180 2.8E-43 T 22-04-2016 VCLMA_RS03620 aa1ff9063d94f6abba939e1ed1b10f13 243 Pfam PF00588 SpoU rRNA Methylase family 5 154 6.3E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VCLMA_RS03620 aa1ff9063d94f6abba939e1ed1b10f13 243 SUPERFAMILY SSF75217 5 168 1.37E-36 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases VCLMA_RS03620 aa1ff9063d94f6abba939e1ed1b10f13 243 Gene3D G3DSA:3.40.1280.10 3 158 7.7E-32 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VCLMA_RS06905 b8869366cd3a561282800fc5061b912b 180 PIRSF PIRSF010252 1 178 1.8E-67 T 22-04-2016 IPR009809 Cell division protein ZapC VCLMA_RS06905 b8869366cd3a561282800fc5061b912b 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 177 37.667 T 22-04-2016 IPR009809 Cell division protein ZapC VCLMA_RS06905 b8869366cd3a561282800fc5061b912b 180 Pfam PF07126 Cell-division protein ZapC 1 168 2.4E-61 T 22-04-2016 IPR009809 Cell division protein ZapC VCLMA_RS00445 7441804f7c346f028a2ebc27ffae4fee 82 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.9E-22 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VCLMA_RS00445 7441804f7c346f028a2ebc27ffae4fee 82 PANTHER PTHR33162 1 68 1.6E-23 T 22-04-2016 VCLMA_RS00445 7441804f7c346f028a2ebc27ffae4fee 82 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 24.502 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VCLMA_RS00445 7441804f7c346f028a2ebc27ffae4fee 82 Pfam PF02416 mttA/Hcf106 family 4 54 6.2E-15 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VCLMA_RS05045 98febc9233aeab6947e19ef5c37d7a3c 276 Pfam PF02517 CAAX protease self-immunity 174 263 3.8E-11 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 VCLMA_RS05045 98febc9233aeab6947e19ef5c37d7a3c 276 PANTHER PTHR40041:SF2 1 276 7.4E-168 T 22-04-2016 VCLMA_RS05045 98febc9233aeab6947e19ef5c37d7a3c 276 PANTHER PTHR40041 1 276 7.4E-168 T 22-04-2016 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 Gene3D G3DSA:3.20.20.10 37 268 6.4E-81 T 22-04-2016 IPR029066 PLP-binding barrel VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PANTHER PTHR11482:SF5 3 416 5.6E-182 T 22-04-2016 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 283 1.1E-71 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 41.164 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 Gene3D G3DSA:2.40.37.10 269 414 1.1E-48 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PANTHER PTHR11482 3 416 5.6E-182 T 22-04-2016 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 1.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 1.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 1.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 1.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 1.3E-26 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 SUPERFAMILY SSF51419 27 284 2.33E-81 T 22-04-2016 IPR029066 PLP-binding barrel VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 SUPERFAMILY SSF50621 259 414 7.33E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 9.1E-170 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 227 242 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 287 390 4.8E-17 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.8E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.8E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 1.8E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS00620 14bbcd2882adceaa0d2342f32a879e11 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 1.8E-30 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 VCLMA_RS06030 5998f29a10fe15791ea5f19752751881 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 3.3E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS06030 5998f29a10fe15791ea5f19752751881 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 3.3E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS06030 5998f29a10fe15791ea5f19752751881 159 SMART SM00347 24 125 8.0E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS06030 5998f29a10fe15791ea5f19752751881 159 SUPERFAMILY SSF46785 5 142 1.6E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS06030 5998f29a10fe15791ea5f19752751881 159 Pfam PF01047 MarR family 31 90 1.5E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS06030 5998f29a10fe15791ea5f19752751881 159 PANTHER PTHR33164 4 149 1.5E-23 T 22-04-2016 VCLMA_RS06030 5998f29a10fe15791ea5f19752751881 159 Gene3D G3DSA:1.10.10.10 2 140 1.6E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS05140 daa363aab607aaf226ccd9f0ebede8f2 323 Gene3D G3DSA:3.40.50.300 2 254 3.2E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05140 daa363aab607aaf226ccd9f0ebede8f2 323 SMART SM00382 32 238 5.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS05140 daa363aab607aaf226ccd9f0ebede8f2 323 SUPERFAMILY SSF52540 31 301 6.66E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05140 daa363aab607aaf226ccd9f0ebede8f2 323 PANTHER PTHR24220 5 315 4.2E-160 T 22-04-2016 VCLMA_RS05140 daa363aab607aaf226ccd9f0ebede8f2 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS05140 daa363aab607aaf226ccd9f0ebede8f2 323 PANTHER PTHR24220:SF535 5 315 4.2E-160 T 22-04-2016 VCLMA_RS05140 daa363aab607aaf226ccd9f0ebede8f2 323 Pfam PF00005 ABC transporter 24 180 1.8E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS05140 daa363aab607aaf226ccd9f0ebede8f2 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 2.6E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS05140 daa363aab607aaf226ccd9f0ebede8f2 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 3.0E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS04450 5256217e745d05e30dd1a0ae31739b2a 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.2E-36 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VCLMA_RS04450 5256217e745d05e30dd1a0ae31739b2a 105 Pfam PF02410 Ribosomal silencing factor during starvation 14 104 1.4E-26 T 22-04-2016 VCLMA_RS04450 5256217e745d05e30dd1a0ae31739b2a 105 Gene3D G3DSA:3.30.460.10 6 105 1.9E-35 T 22-04-2016 VCLMA_RS04450 5256217e745d05e30dd1a0ae31739b2a 105 SUPERFAMILY SSF81301 5 105 1.28E-34 T 22-04-2016 VCLMA_RS04450 5256217e745d05e30dd1a0ae31739b2a 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 23.415 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VCLMA_RS04450 5256217e745d05e30dd1a0ae31739b2a 105 PANTHER PTHR21043 1 105 8.6E-40 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 SUPERFAMILY SSF50341 11 154 1.96E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 SUPERFAMILY SSF50341 364 509 8.24E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 Pfam PF01584 CheW-like domain 192 335 4.6E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 Pfam PF01584 CheW-like domain 370 505 2.3E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 Pfam PF01584 CheW-like domain 19 153 2.1E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 SUPERFAMILY SSF50341 187 336 1.96E-28 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 SMART SM00260 188 334 4.4E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 SMART SM00260 366 503 6.6E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 SMART SM00260 15 152 2.1E-17 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 PANTHER PTHR22617 338 519 9.4E-44 T 22-04-2016 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 Gene3D G3DSA:2.30.30.40 363 407 4.1E-4 T 22-04-2016 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 Gene3D G3DSA:2.40.50.180 410 455 1.5E-11 T 22-04-2016 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 Gene3D G3DSA:2.40.50.180 61 103 1.6E-8 T 22-04-2016 VCLMA_RS06615 dc6c973278f694e9c9390269cd5a9e83 520 Gene3D G3DSA:2.40.50.180 232 268 1.7E-9 T 22-04-2016 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 SMART SM00486 153 558 5.1E-64 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 Gene3D G3DSA:3.90.1600.10 401 431 1.4E-10 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 Gene3D G3DSA:3.90.1600.10 515 628 1.4E-10 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 Gene3D G3DSA:1.10.287.690 468 507 5.9E-4 T 22-04-2016 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 SUPERFAMILY SSF56672 385 780 6.12E-116 T 22-04-2016 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 SUPERFAMILY SSF53098 4 389 1.46E-82 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 PANTHER PTHR10322 105 787 3.3E-188 T 22-04-2016 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 153 296 5.6E-14 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 Gene3D G3DSA:3.30.420.10 153 365 1.8E-37 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS05710 dc0976c0c9ff1764c4a34877cd2b6fd0 787 Pfam PF00136 DNA polymerase family B 377 744 3.9E-43 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS10330 7c1ddcad993f10eaf7c65e3db5b4c63f 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 4.9E-92 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VCLMA_RS10330 7c1ddcad993f10eaf7c65e3db5b4c63f 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.598 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 VCLMA_RS10330 7c1ddcad993f10eaf7c65e3db5b4c63f 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 2.1E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS10330 7c1ddcad993f10eaf7c65e3db5b4c63f 208 PANTHER PTHR10285 1 197 6.6E-103 T 22-04-2016 VCLMA_RS10330 7c1ddcad993f10eaf7c65e3db5b4c63f 208 SUPERFAMILY SSF53271 4 206 3.15E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS10330 7c1ddcad993f10eaf7c65e3db5b4c63f 208 Gene3D G3DSA:3.40.50.2020 2 208 8.8E-76 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like VCLMA_RS06170 f08bcbef07b8786f577d64f569948768 339 Pfam PF05128 Domain of unknown function (DUF697) 175 333 3.4E-49 T 22-04-2016 IPR021147 Protein of unknown function DUF697 VCLMA_RS06170 f08bcbef07b8786f577d64f569948768 339 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 63 333 4.9E-71 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 VCLMA_RS06170 f08bcbef07b8786f577d64f569948768 339 PANTHER PTHR39342:SF1 1 333 1.6E-72 T 22-04-2016 VCLMA_RS06170 f08bcbef07b8786f577d64f569948768 339 PANTHER PTHR39342 1 333 1.6E-72 T 22-04-2016 VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 178.31 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 4.9E-140 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 SUPERFAMILY SSF56059 123 313 1.08E-59 T 22-04-2016 VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 Gene3D G3DSA:3.40.50.20 2 129 7.0E-57 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 Gene3D G3DSA:3.30.470.20 192 299 4.6E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 PANTHER PTHR21621:SF4 1 314 7.3E-167 T 22-04-2016 VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.0E-48 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 3.4E-79 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 PANTHER PTHR21621 1 314 7.3E-167 T 22-04-2016 VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 SUPERFAMILY SSF52440 2 122 6.91E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS02365 8dad823bd27931e60e08caa9062ef8ff 318 Gene3D G3DSA:3.30.1490.20 138 191 2.8E-31 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS05130 d1211664767e482de71b78b2cec5e428 266 SUPERFAMILY SSF161098 48 251 1.64E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS05130 d1211664767e482de71b78b2cec5e428 266 PANTHER PTHR30465:SF74 1 266 1.1E-137 T 22-04-2016 VCLMA_RS05130 d1211664767e482de71b78b2cec5e428 266 Gene3D G3DSA:1.10.3720.10 47 262 4.7E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS05130 d1211664767e482de71b78b2cec5e428 266 PANTHER PTHR30465 1 266 1.1E-137 T 22-04-2016 VCLMA_RS05130 d1211664767e482de71b78b2cec5e428 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 266 7.3E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 523 537 1.3E-17 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 355 379 1.3E-17 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 277 287 1.3E-17 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 PRINTS PR00811 Bacterial general secretion pathway protein D signature 500 518 1.3E-17 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 Pfam PF07655 Secretin N-terminal domain 145 248 3.0E-24 T 22-04-2016 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 PANTHER PTHR30332:SF8 206 557 3.1E-97 T 22-04-2016 VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 PANTHER PTHR30332 206 557 3.1E-97 T 22-04-2016 VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 Pfam PF00263 Bacterial type II and III secretion system protein 360 535 5.9E-41 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 242 535 2.6E-109 T 22-04-2016 IPR013358 Pilus biogenesis, MshL VCLMA_RS02030 0e79322b760c4c4b022bf6872c7608d3 559 SMART SM00965 93 141 1.3E-5 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VCLMA_RS02210 f6b37ce4b27dc72f26027cc9b76f074e 157 PANTHER PTHR34390 1 157 4.8E-49 T 22-04-2016 VCLMA_RS02210 f6b37ce4b27dc72f26027cc9b76f074e 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 2.9E-36 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE VCLMA_RS10965 b221c63a341e74cf3db3510ed4834686 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 7.8E-42 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VCLMA_RS10965 b221c63a341e74cf3db3510ed4834686 161 SUPERFAMILY SSF89562 1 158 1.7E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VCLMA_RS10965 b221c63a341e74cf3db3510ed4834686 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.6E-68 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VCLMA_RS10965 b221c63a341e74cf3db3510ed4834686 161 Gene3D G3DSA:3.50.30.40 5 157 2.1E-48 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VCLMA_RS10965 b221c63a341e74cf3db3510ed4834686 161 PANTHER PTHR33254:SF1 5 161 4.3E-95 T 22-04-2016 VCLMA_RS10965 b221c63a341e74cf3db3510ed4834686 161 PANTHER PTHR33254 5 161 4.3E-95 T 22-04-2016 VCLMA_RS10510 88d5cc31aa58ae2780ff9a658c6135ba 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 30.616 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 VCLMA_RS10510 88d5cc31aa58ae2780ff9a658c6135ba 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 9.0E-68 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 VCLMA_RS10510 88d5cc31aa58ae2780ff9a658c6135ba 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 4.2E-55 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 VCLMA_RS05635 2bf11e3c77273ba79a1996b5d6d06585 227 Pfam PF11813 Protein of unknown function (DUF3334) 3 227 4.1E-115 T 22-04-2016 IPR024513 Protein of unknown function DUF3334 VCLMA_RS05635 2bf11e3c77273ba79a1996b5d6d06585 227 SUPERFAMILY SSF103039 10 173 2.88E-24 T 22-04-2016 IPR028976 CheC-like domain VCLMA_RS05635 2bf11e3c77273ba79a1996b5d6d06585 227 Gene3D G3DSA:3.40.1550.10 15 173 8.1E-14 T 22-04-2016 IPR028976 CheC-like domain VCLMA_RS08025 7f81e96960d617149348fedbb6b7298c 195 Gene3D G3DSA:3.30.1460.30 3 104 4.2E-36 T 22-04-2016 IPR007076 TfoX, N-terminal VCLMA_RS08025 7f81e96960d617149348fedbb6b7298c 195 Pfam PF04993 TfoX N-terminal domain 12 103 3.6E-30 T 22-04-2016 IPR007076 TfoX, N-terminal VCLMA_RS08025 7f81e96960d617149348fedbb6b7298c 195 PIRSF PIRSF028788 1 195 2.4E-48 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type VCLMA_RS08025 7f81e96960d617149348fedbb6b7298c 195 Gene3D G3DSA:1.10.150.20 114 193 1.6E-30 T 22-04-2016 VCLMA_RS08025 7f81e96960d617149348fedbb6b7298c 195 PANTHER PTHR36121:SF1 1 195 5.5E-56 T 22-04-2016 VCLMA_RS08025 7f81e96960d617149348fedbb6b7298c 195 PANTHER PTHR36121 1 195 5.5E-56 T 22-04-2016 VCLMA_RS08025 7f81e96960d617149348fedbb6b7298c 195 Pfam PF04994 TfoX C-terminal domain 115 194 1.6E-32 T 22-04-2016 IPR007077 TfoX, C-terminal VCLMA_RS08025 7f81e96960d617149348fedbb6b7298c 195 SUPERFAMILY SSF159894 6 103 3.92E-31 T 22-04-2016 VCLMA_RS05670 2de0e26bad43371adea154e5b7680af5 336 Hamap MF_00737 Formimidoylglutamase [hutG]. 6 324 41.754 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VCLMA_RS05670 2de0e26bad43371adea154e5b7680af5 336 TIGRFAM TIGR01227 hutG: formimidoylglutamase 11 324 5.2E-126 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 VCLMA_RS05670 2de0e26bad43371adea154e5b7680af5 336 Gene3D G3DSA:3.40.800.10 4 332 2.9E-109 T 22-04-2016 IPR023696 Ureohydrolase domain VCLMA_RS05670 2de0e26bad43371adea154e5b7680af5 336 PANTHER PTHR11358 5 334 5.3E-150 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VCLMA_RS05670 2de0e26bad43371adea154e5b7680af5 336 SUPERFAMILY SSF52768 10 330 1.42E-80 T 22-04-2016 VCLMA_RS05670 2de0e26bad43371adea154e5b7680af5 336 PIRSF PIRSF036979 26 330 1.4E-21 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VCLMA_RS05670 2de0e26bad43371adea154e5b7680af5 336 Pfam PF00491 Arginase family 45 322 2.6E-57 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 VCLMA_RS05670 2de0e26bad43371adea154e5b7680af5 336 PANTHER PTHR11358:SF35 5 334 5.3E-150 T 22-04-2016 VCLMA_RS01000 294164c483e0504f311a1eeed0c04aec 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 2.2E-34 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 VCLMA_RS01000 294164c483e0504f311a1eeed0c04aec 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 86.311 T 22-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 VCLMA_RS01000 294164c483e0504f311a1eeed0c04aec 162 PANTHER PTHR38596:SF1 1 162 3.3E-98 T 22-04-2016 VCLMA_RS01000 294164c483e0504f311a1eeed0c04aec 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 3.5E-68 T 22-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria VCLMA_RS01000 294164c483e0504f311a1eeed0c04aec 162 PANTHER PTHR38596 1 162 3.3E-98 T 22-04-2016 VCLMA_RS04830 2cb9f31e5b0e3663baeb383b26d57016 138 Pfam PF00571 CBS domain 73 127 1.0E-12 T 22-04-2016 IPR000644 CBS domain VCLMA_RS04830 2cb9f31e5b0e3663baeb383b26d57016 138 Pfam PF00571 CBS domain 6 61 7.2E-7 T 22-04-2016 IPR000644 CBS domain VCLMA_RS04830 2cb9f31e5b0e3663baeb383b26d57016 138 Gene3D G3DSA:3.10.580.10 1 132 3.0E-29 T 22-04-2016 VCLMA_RS04830 2cb9f31e5b0e3663baeb383b26d57016 138 PANTHER PTHR11911 1 135 1.3E-25 T 22-04-2016 VCLMA_RS04830 2cb9f31e5b0e3663baeb383b26d57016 138 SUPERFAMILY SSF54631 1 126 2.27E-31 T 22-04-2016 VCLMA_RS04830 2cb9f31e5b0e3663baeb383b26d57016 138 SMART SM00116 80 127 1.6E-7 T 22-04-2016 IPR000644 CBS domain VCLMA_RS04830 2cb9f31e5b0e3663baeb383b26d57016 138 SMART SM00116 13 61 0.0083 T 22-04-2016 IPR000644 CBS domain VCLMA_RS00590 738fdb2cca9ec91cc5b242689efb9bce 255 SUPERFAMILY SSF69618 1 241 3.53E-49 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00590 738fdb2cca9ec91cc5b242689efb9bce 255 Gene3D G3DSA:3.40.50.10090 2 112 6.3E-10 T 22-04-2016 VCLMA_RS00590 738fdb2cca9ec91cc5b242689efb9bce 255 Gene3D G3DSA:3.40.50.10090 119 241 4.6E-8 T 22-04-2016 VCLMA_RS00590 738fdb2cca9ec91cc5b242689efb9bce 255 PANTHER PTHR38042:SF1 1 250 1.0E-88 T 22-04-2016 VCLMA_RS00590 738fdb2cca9ec91cc5b242689efb9bce 255 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 237 2.4E-32 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 VCLMA_RS00590 738fdb2cca9ec91cc5b242689efb9bce 255 PANTHER PTHR38042 1 250 1.0E-88 T 22-04-2016 VCLMA_RS09255 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 PANTHER PTHR30009:SF2 6 475 2.7E-249 T 22-04-2016 VCLMA_RS09255 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 Gene3D G3DSA:3.30.1360.60 397 472 5.4E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS09255 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 SUPERFAMILY SSF55604 399 472 9.15E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS09255 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 Pfam PF02378 Phosphotransferase system, EIIC 13 318 2.7E-75 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VCLMA_RS09255 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 1.3E-198 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS09255 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VCLMA_RS09255 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 Pfam PF00367 phosphotransferase system, EIIB 403 434 2.1E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VCLMA_RS09255 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 458 8.4E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS09255 f5329e3b09f93a4fd4b0d7da7a4fa7db 476 PANTHER PTHR30009 6 475 2.7E-249 T 22-04-2016 VCLMA_RS07020 4ae0970e0642411bf31245b53cb49fcb 65 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 10 28 3.4E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VCLMA_RS07020 4ae0970e0642411bf31245b53cb49fcb 65 PIRSF PIRSF036704 1 65 4.3E-33 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VCLMA_RS07020 4ae0970e0642411bf31245b53cb49fcb 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 2.6E-24 T 22-04-2016 IPR014177 Putative formate dehydrogenase, TAT signal-containing VCLMA_RS07020 4ae0970e0642411bf31245b53cb49fcb 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 29 1.0E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VCLMA_RS02565 f35282693cfbb515be9f0ad90133d68a 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 5 206 4.1E-80 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VCLMA_RS02565 f35282693cfbb515be9f0ad90133d68a 208 SUPERFAMILY SSF53335 14 204 1.67E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS02565 f35282693cfbb515be9f0ad90133d68a 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.365 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VCLMA_RS02565 f35282693cfbb515be9f0ad90133d68a 208 Gene3D G3DSA:3.40.50.150 13 204 1.0E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS02565 f35282693cfbb515be9f0ad90133d68a 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VCLMA_RS02565 f35282693cfbb515be9f0ad90133d68a 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 1.2E-70 T 22-04-2016 VCLMA_RS02565 f35282693cfbb515be9f0ad90133d68a 208 PANTHER PTHR11579 1 203 2.4E-91 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 PANTHER PTHR41533 1 535 6.1E-175 T 22-04-2016 VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 SUPERFAMILY SSF141523 289 344 4.45E-19 T 22-04-2016 VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 SUPERFAMILY SSF141523 400 450 4.45E-19 T 22-04-2016 VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 Pfam PF01471 Putative peptidoglycan binding domain 225 264 3.8E-8 T 22-04-2016 IPR002477 Peptidoglycan binding-like VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 PANTHER PTHR41533:SF1 1 535 6.1E-175 T 22-04-2016 VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 Pfam PF03734 L,D-transpeptidase catalytic domain 292 460 6.0E-30 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 Gene3D G3DSA:2.40.440.10 285 335 4.3E-12 T 22-04-2016 VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 Gene3D G3DSA:2.40.440.10 402 451 4.3E-12 T 22-04-2016 VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 Gene3D G3DSA:1.10.101.10 201 272 2.7E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like VCLMA_RS05980 1fd737bb353912cbcef877a8ec05e3c0 536 SUPERFAMILY SSF47090 198 272 1.18E-11 T 22-04-2016 IPR002477 Peptidoglycan binding-like VCLMA_RS06045 87915a0cd8705166a669f252f7702b6f 101 SUPERFAMILY SSF52794 1 101 2.2E-36 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS06045 87915a0cd8705166a669f252f7702b6f 101 PANTHER PTHR34581:SF2 2 101 6.1E-51 T 22-04-2016 VCLMA_RS06045 87915a0cd8705166a669f252f7702b6f 101 PANTHER PTHR34581 2 101 6.1E-51 T 22-04-2016 VCLMA_RS06045 87915a0cd8705166a669f252f7702b6f 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 1.4E-24 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS06045 87915a0cd8705166a669f252f7702b6f 101 Gene3D G3DSA:3.40.50.270 1 101 7.1E-39 T 22-04-2016 VCLMA_RS11375 f086bfb57d167f5ab5c0282931c5072e 427 SUPERFAMILY SSF56935 269 339 2.56E-22 T 22-04-2016 VCLMA_RS11375 f086bfb57d167f5ab5c0282931c5072e 427 SUPERFAMILY SSF56935 28 239 2.56E-22 T 22-04-2016 VCLMA_RS11375 f086bfb57d167f5ab5c0282931c5072e 427 SUPERFAMILY SSF56935 367 427 2.56E-22 T 22-04-2016 VCLMA_RS11375 f086bfb57d167f5ab5c0282931c5072e 427 Gene3D G3DSA:2.40.160.10 166 331 1.1E-7 T 22-04-2016 IPR023614 Porin domain VCLMA_RS11375 f086bfb57d167f5ab5c0282931c5072e 427 Gene3D G3DSA:2.40.160.10 367 401 1.1E-7 T 22-04-2016 IPR023614 Porin domain VCLMA_RS11375 f086bfb57d167f5ab5c0282931c5072e 427 Gene3D G3DSA:2.40.160.10 32 130 1.1E-7 T 22-04-2016 IPR023614 Porin domain VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 361 6.3E-11 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 Gene3D G3DSA:3.90.190.20 313 449 6.2E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 Pfam PF01225 Mur ligase family, catalytic domain 2 101 1.8E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.169 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 PANTHER PTHR23135:SF17 1 439 9.0E-305 T 22-04-2016 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 SUPERFAMILY SSF53244 311 448 8.5E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 SUPERFAMILY SSF51984 1 89 5.89E-24 T 22-04-2016 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 PANTHER PTHR23135 1 439 9.0E-305 T 22-04-2016 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 Pfam PF08245 Mur ligase middle domain 108 291 1.3E-23 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 Gene3D G3DSA:3.40.1190.10 92 312 6.5E-88 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 SUPERFAMILY SSF53623 96 306 6.15E-53 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 4.6E-275 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 VCLMA_RS11825 e31b5a9605ba2971119ae5a17288520c 451 Gene3D G3DSA:3.40.50.720 1 90 2.7E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS08880 875d3419dae5a13348d4d4d4ce8ad9f9 153 SUPERFAMILY SSF56524 32 151 1.44E-9 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 VCLMA_RS04965 f13a22313bc8063ea6dc3d47e278a4d5 82 PANTHER PTHR36931 1 82 1.7E-39 T 22-04-2016 VCLMA_RS04965 f13a22313bc8063ea6dc3d47e278a4d5 82 Pfam PF03692 Putative zinc- or iron-chelating domain 3 65 7.4E-7 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein VCLMA_RS01635 ea250c15ab4517d2d3a2848a0c831932 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 8.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS01635 ea250c15ab4517d2d3a2848a0c831932 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 8.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS01635 ea250c15ab4517d2d3a2848a0c831932 211 Gene3D G3DSA:1.10.357.10 2 161 3.8E-27 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS01635 ea250c15ab4517d2d3a2848a0c831932 211 PANTHER PTHR30055:SF30 1 189 4.4E-68 T 22-04-2016 VCLMA_RS01635 ea250c15ab4517d2d3a2848a0c831932 211 SUPERFAMILY SSF46689 3 72 3.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS01635 ea250c15ab4517d2d3a2848a0c831932 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 4.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS01635 ea250c15ab4517d2d3a2848a0c831932 211 PANTHER PTHR30055 1 189 4.4E-68 T 22-04-2016 VCLMA_RS01635 ea250c15ab4517d2d3a2848a0c831932 211 Pfam PF13972 Bacterial transcriptional repressor 57 199 1.7E-41 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR VCLMA_RS07365 19a0013e741fad0b33df4b6c8a66d954 261 PANTHER PTHR35524 4 261 4.6E-94 T 22-04-2016 VCLMA_RS07365 19a0013e741fad0b33df4b6c8a66d954 261 Gene3D G3DSA:3.30.1330.80 111 227 1.4E-47 T 22-04-2016 VCLMA_RS07365 19a0013e741fad0b33df4b6c8a66d954 261 PIRSF PIRSF001332 13 261 1.8E-97 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 VCLMA_RS07365 19a0013e741fad0b33df4b6c8a66d954 261 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 30 260 4.8E-106 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 VCLMA_RS07365 19a0013e741fad0b33df4b6c8a66d954 261 Pfam PF03306 Alpha-acetolactate decarboxylase 31 248 3.5E-83 T 22-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 VCLMA_RS07365 19a0013e741fad0b33df4b6c8a66d954 261 SUPERFAMILY SSF117856 30 260 7.32E-84 T 22-04-2016 VCLMA_RS04045 7b6e5b3f3e225d5fbd27b6b15855e3e2 519 PANTHER PTHR30282:SF1 5 519 0.0 T 22-04-2016 VCLMA_RS04045 7b6e5b3f3e225d5fbd27b6b15855e3e2 519 Pfam PF03806 AbgT putative transporter family 19 517 6.2E-220 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VCLMA_RS04045 7b6e5b3f3e225d5fbd27b6b15855e3e2 519 PANTHER PTHR30282 5 519 0.0 T 22-04-2016 VCLMA_RS05805 930848718fc8476e59b12403aa1d39c6 291 PANTHER PTHR36838:SF2 1 291 2.8E-154 T 22-04-2016 VCLMA_RS05805 930848718fc8476e59b12403aa1d39c6 291 Pfam PF03547 Membrane transport protein 141 284 1.5E-10 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 VCLMA_RS05805 930848718fc8476e59b12403aa1d39c6 291 PANTHER PTHR36838 1 291 2.8E-154 T 22-04-2016 VCLMA_RS04795 ee5333ec71e30a96ea3d7d6f6db056db 296 Hamap MF_00973 Gluconeogenesis factor. 5 296 31.176 T 22-04-2016 IPR010119 Gluconeogenesis factor VCLMA_RS04795 ee5333ec71e30a96ea3d7d6f6db056db 296 Gene3D G3DSA:3.40.50.10680 79 294 3.6E-55 T 22-04-2016 VCLMA_RS04795 ee5333ec71e30a96ea3d7d6f6db056db 296 Pfam PF01933 Uncharacterised protein family UPF0052 9 287 1.6E-75 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VCLMA_RS04795 ee5333ec71e30a96ea3d7d6f6db056db 296 PANTHER PTHR30135 1 296 6.8E-115 T 22-04-2016 VCLMA_RS04795 ee5333ec71e30a96ea3d7d6f6db056db 296 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 292 2.5E-107 T 22-04-2016 IPR010119 Gluconeogenesis factor VCLMA_RS04795 ee5333ec71e30a96ea3d7d6f6db056db 296 PANTHER PTHR30135:SF3 1 296 6.8E-115 T 22-04-2016 VCLMA_RS04795 ee5333ec71e30a96ea3d7d6f6db056db 296 SUPERFAMILY SSF142338 6 291 1.96E-85 T 22-04-2016 VCLMA_RS12180 9415ed9b6884530d9e04f0fceccd2b1c 263 Pfam PF07063 Domain of unknown function (DUF1338) 136 261 1.4E-28 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 VCLMA_RS12180 9415ed9b6884530d9e04f0fceccd2b1c 263 Pfam PF07063 Domain of unknown function (DUF1338) 32 118 9.9E-20 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 VCLMA_RS12180 9415ed9b6884530d9e04f0fceccd2b1c 263 SMART SM01150 3 262 8.0E-117 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 VCLMA_RS12180 9415ed9b6884530d9e04f0fceccd2b1c 263 PANTHER PTHR31136:SF2 4 263 6.7E-144 T 22-04-2016 VCLMA_RS12180 9415ed9b6884530d9e04f0fceccd2b1c 263 PANTHER PTHR31136 4 263 6.7E-144 T 22-04-2016 VCLMA_RS07435 741fedb198b8ceac42c477e57ef3002d 267 Gene3D G3DSA:3.40.190.10 54 101 4.2E-5 T 22-04-2016 VCLMA_RS07435 741fedb198b8ceac42c477e57ef3002d 267 Gene3D G3DSA:3.40.190.10 205 246 4.2E-5 T 22-04-2016 VCLMA_RS07435 741fedb198b8ceac42c477e57ef3002d 267 SUPERFAMILY SSF53850 36 246 2.53E-9 T 22-04-2016 VCLMA_RS03000 e7441acd99bad2dbb48e0c43a249bb15 327 PANTHER PTHR24220 7 324 2.5E-139 T 22-04-2016 VCLMA_RS03000 e7441acd99bad2dbb48e0c43a249bb15 327 PANTHER PTHR24220:SF535 7 324 2.5E-139 T 22-04-2016 VCLMA_RS03000 e7441acd99bad2dbb48e0c43a249bb15 327 SMART SM00382 34 231 1.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03000 e7441acd99bad2dbb48e0c43a249bb15 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 1.4E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS03000 e7441acd99bad2dbb48e0c43a249bb15 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS03000 e7441acd99bad2dbb48e0c43a249bb15 327 Gene3D G3DSA:3.40.50.300 4 253 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03000 e7441acd99bad2dbb48e0c43a249bb15 327 Pfam PF00005 ABC transporter 26 181 2.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS03000 e7441acd99bad2dbb48e0c43a249bb15 327 SUPERFAMILY SSF52540 5 252 2.08E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03000 e7441acd99bad2dbb48e0c43a249bb15 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 2.8E-22 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VCLMA_RS05465 973738fad7ab0b8829e89a2944963f0c 502 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 25 183 1.6E-54 T 22-04-2016 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VCLMA_RS05465 973738fad7ab0b8829e89a2944963f0c 502 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 190 498 7.6E-134 T 22-04-2016 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VCLMA_RS05150 e8698f2f57ed0b268ced961c202d109e 315 SUPERFAMILY SSF47616 164 313 4.04E-40 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VCLMA_RS05150 e8698f2f57ed0b268ced961c202d109e 315 PANTHER PTHR32419:SF6 1 315 2.0E-179 T 22-04-2016 VCLMA_RS05150 e8698f2f57ed0b268ced961c202d109e 315 SUPERFAMILY SSF52833 31 150 1.31E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS05150 e8698f2f57ed0b268ced961c202d109e 315 Gene3D G3DSA:1.20.1050.10 168 276 5.7E-29 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like VCLMA_RS05150 e8698f2f57ed0b268ced961c202d109e 315 Pfam PF13410 Glutathione S-transferase, C-terminal domain 192 263 1.7E-13 T 22-04-2016 VCLMA_RS05150 e8698f2f57ed0b268ced961c202d109e 315 Gene3D G3DSA:3.40.30.10 30 167 5.5E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS05150 e8698f2f57ed0b268ced961c202d109e 315 PANTHER PTHR32419 1 315 2.0E-179 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VCLMA_RS05150 e8698f2f57ed0b268ced961c202d109e 315 PIRSF PIRSF015753 4 312 3.7E-137 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 VCLMA_RS05150 e8698f2f57ed0b268ced961c202d109e 315 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 4.4E-21 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 Pfam PF00285 Citrate synthase, C-terminal domain 11 358 9.5E-115 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 Gene3D G3DSA:1.10.580.10 17 238 1.2E-74 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 Gene3D G3DSA:1.10.230.10 239 323 9.0E-30 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 PIRSF PIRSF001369 4 377 4.6E-115 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 11 376 7.1E-166 T 22-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 PANTHER PTHR11739:SF4 11 376 8.6E-153 T 22-04-2016 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 ProSitePatterns PS00480 Citrate synthase signature. 259 271 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 SUPERFAMILY SSF48256 10 376 1.23E-123 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 PANTHER PTHR11739 11 376 8.6E-153 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 PRINTS PR00143 Citrate synthase signature 177 192 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 PRINTS PR00143 Citrate synthase signature 126 139 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 PRINTS PR00143 Citrate synthase signature 329 343 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 PRINTS PR00143 Citrate synthase signature 199 227 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 PRINTS PR00143 Citrate synthase signature 252 272 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS06315 150ce799414c8b05c490899e80e6efb5 377 PRINTS PR00143 Citrate synthase signature 309 325 1.3E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 VCLMA_RS00825 d433cce966a49576acf0b05468627a8b 368 PANTHER PTHR30469:SF11 1 364 1.0E-153 T 22-04-2016 VCLMA_RS00825 d433cce966a49576acf0b05468627a8b 368 PANTHER PTHR30469 1 364 1.0E-153 T 22-04-2016 VCLMA_RS00825 d433cce966a49576acf0b05468627a8b 368 SUPERFAMILY SSF111369 58 273 1.19E-38 T 22-04-2016 VCLMA_RS00825 d433cce966a49576acf0b05468627a8b 368 Gene3D G3DSA:2.40.50.100 163 194 4.1E-12 T 22-04-2016 VCLMA_RS00825 d433cce966a49576acf0b05468627a8b 368 Gene3D G3DSA:2.40.50.100 70 102 4.1E-12 T 22-04-2016 VCLMA_RS00825 d433cce966a49576acf0b05468627a8b 368 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 353 1.8E-74 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VCLMA_RS00825 d433cce966a49576acf0b05468627a8b 368 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 269 8.5E-27 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VCLMA_RS05460 c0dbfbd36c1368a5417ff88a3f323d2e 329 Gene3D G3DSA:3.30.470.20 167 209 3.4E-4 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS05460 c0dbfbd36c1368a5417ff88a3f323d2e 329 SUPERFAMILY SSF56059 51 205 3.05E-20 T 22-04-2016 VCLMA_RS05460 c0dbfbd36c1368a5417ff88a3f323d2e 329 SUPERFAMILY SSF56059 237 285 3.05E-20 T 22-04-2016 VCLMA_RS05460 c0dbfbd36c1368a5417ff88a3f323d2e 329 Pfam PF14397 Sugar-transfer associated ATP-grasp 26 299 3.4E-115 T 22-04-2016 VCLMA_RS05460 c0dbfbd36c1368a5417ff88a3f323d2e 329 Gene3D G3DSA:3.30.470.20 236 290 3.6E-5 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS05460 c0dbfbd36c1368a5417ff88a3f323d2e 329 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 10 323 2.3E-167 T 22-04-2016 IPR011758 Alpha-L-glutamate ligase-related protein VCLMA_RS05460 c0dbfbd36c1368a5417ff88a3f323d2e 329 Gene3D G3DSA:3.30.470.20 45 106 5.8E-5 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 SUPERFAMILY SSF58104 246 539 2.75E-66 T 22-04-2016 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 PANTHER PTHR32089 8 541 1.7E-283 T 22-04-2016 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 SMART SM00283 277 538 2.1E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 184 204 1.0E-27 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 1.0E-27 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 1.0E-27 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 1.0E-27 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 341 537 2.5E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 SMART SM01049 30 124 3.1E-19 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 Pfam PF17200 Single Cache domain 2 36 185 9.5E-35 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 Gene3D G3DSA:1.10.287.950 292 505 3.3E-55 T 22-04-2016 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 PANTHER PTHR32089:SF31 8 541 1.7E-283 T 22-04-2016 VCLMA_RS02255 4f9aef8e284b1a81d385e58e1a1a2fe1 541 Gene3D G3DSA:3.30.450.20 18 178 5.2E-32 T 22-04-2016 VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 PANTHER PTHR24322 10 185 2.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 Gene3D G3DSA:3.40.50.720 2 187 4.1E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 Pfam PF00106 short chain dehydrogenase 7 186 4.5E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 SUPERFAMILY SSF51735 1 186 1.1E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 PANTHER PTHR24322:SF57 10 185 2.2E-15 T 22-04-2016 VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.5E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.5E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.5E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.5E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS09430 5431d5cec60d0ab6a63c4d06cc2656fc 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.5E-6 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 Gene3D G3DSA:3.90.780.10 340 549 1.1E-22 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 PANTHER PTHR11575:SF27 440 593 2.3E-199 T 22-04-2016 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 PANTHER PTHR11575:SF27 1 424 2.3E-199 T 22-04-2016 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 PRINTS PR01607 Apyrase family signature 26 44 1.4E-13 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 PRINTS PR01607 Apyrase family signature 230 253 1.4E-13 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 PRINTS PR01607 Apyrase family signature 203 220 1.4E-13 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 PRINTS PR01607 Apyrase family signature 257 277 1.4E-13 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 SUPERFAMILY SSF55816 338 548 2.35E-25 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 ProSitePatterns PS00786 5'-nucleotidase signature 2. 107 118 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 SUPERFAMILY SSF56300 19 327 9.5E-77 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 PANTHER PTHR11575 440 593 2.3E-199 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 PANTHER PTHR11575 1 424 2.3E-199 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 Pfam PF00149 Calcineurin-like phosphoesterase 29 247 1.6E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 Gene3D G3DSA:3.60.21.10 17 326 1.0E-82 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS11185 224c9a23772a44313513f65ba62eab69 634 Pfam PF02872 5'-nucleotidase, C-terminal domain 342 492 1.7E-22 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 VCLMA_RS04995 102ddd53f02d512633ce9a84672c9b32 286 PANTHER PTHR11066:SF34 5 284 3.3E-117 T 22-04-2016 VCLMA_RS04995 102ddd53f02d512633ce9a84672c9b32 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 3.1E-94 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VCLMA_RS04995 102ddd53f02d512633ce9a84672c9b32 286 Gene3D G3DSA:3.10.129.10 124 284 2.2E-57 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS04995 102ddd53f02d512633ce9a84672c9b32 286 Gene3D G3DSA:3.10.129.10 4 116 2.6E-46 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS04995 102ddd53f02d512633ce9a84672c9b32 286 SUPERFAMILY SSF54637 116 283 1.81E-58 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS04995 102ddd53f02d512633ce9a84672c9b32 286 PANTHER PTHR11066 5 284 3.3E-117 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 VCLMA_RS04995 102ddd53f02d512633ce9a84672c9b32 286 Pfam PF13622 Thioesterase-like superfamily 33 282 1.7E-60 T 22-04-2016 VCLMA_RS04995 102ddd53f02d512633ce9a84672c9b32 286 SUPERFAMILY SSF54637 5 114 9.33E-40 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS01080 feb8f005abda5da6834bb3091e40de8a 259 PANTHER PTHR10859 2 135 1.4E-27 T 22-04-2016 VCLMA_RS01080 feb8f005abda5da6834bb3091e40de8a 259 SUPERFAMILY SSF53448 3 146 4.97E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS01080 feb8f005abda5da6834bb3091e40de8a 259 Pfam PF00535 Glycosyl transferase family 2 8 128 1.0E-14 T 22-04-2016 IPR001173 Glycosyltransferase 2-like VCLMA_RS01080 feb8f005abda5da6834bb3091e40de8a 259 Gene3D G3DSA:3.90.550.10 3 123 8.7E-13 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS04175 895ab9dedd0deb5a06e046605d7c4727 254 PANTHER PTHR30433:SF2 2 254 2.9E-131 T 22-04-2016 IPR022522 Flagellar motor stator, MotA VCLMA_RS04175 895ab9dedd0deb5a06e046605d7c4727 254 PANTHER PTHR30433 2 254 2.9E-131 T 22-04-2016 VCLMA_RS04175 895ab9dedd0deb5a06e046605d7c4727 254 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site VCLMA_RS04175 895ab9dedd0deb5a06e046605d7c4727 254 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 6.7E-21 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 SUPERFAMILY SSF55174 19 71 6.18E-9 T 22-04-2016 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 Pfam PF01479 S4 domain 20 66 9.3E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 SMART SM00363 20 80 3.6E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 Gene3D G3DSA:3.10.290.10 20 68 3.5E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 PANTHER PTHR11079 1 79 1.8E-135 T 22-04-2016 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 PANTHER PTHR11079 96 259 1.8E-135 T 22-04-2016 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 PANTHER PTHR11079:SF84 1 79 1.8E-135 T 22-04-2016 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 PANTHER PTHR11079:SF84 96 259 1.8E-135 T 22-04-2016 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 Pfam PF00849 RNA pseudouridylate synthase 103 248 1.1E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 258 1.2E-76 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 142 156 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS09330 eedcc71aef672cd777abc5659d6730cc 314 SUPERFAMILY SSF55120 97 272 1.17E-54 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS08860 f4b393cad82ee09f9b1ef3815eaa03ed 220 PANTHER PTHR35011:SF1 1 129 3.8E-92 T 22-04-2016 VCLMA_RS08860 f4b393cad82ee09f9b1ef3815eaa03ed 220 PANTHER PTHR35011:SF1 152 202 3.8E-92 T 22-04-2016 VCLMA_RS08860 f4b393cad82ee09f9b1ef3815eaa03ed 220 PANTHER PTHR35011 1 129 3.8E-92 T 22-04-2016 VCLMA_RS08860 f4b393cad82ee09f9b1ef3815eaa03ed 220 PANTHER PTHR35011 152 202 3.8E-92 T 22-04-2016 VCLMA_RS08860 f4b393cad82ee09f9b1ef3815eaa03ed 220 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 8.1E-26 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 319 1.3E-120 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 113 132 1.3E-18 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 1.3E-18 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 88 104 1.3E-18 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.3E-18 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 PANTHER PTHR30034:SF0 2 349 1.6E-150 T 22-04-2016 VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 Pfam PF02154 Flagellar motor switch protein FliM 37 229 9.2E-82 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 Gene3D G3DSA:3.40.1550.10 61 230 9.7E-7 T 22-04-2016 IPR028976 CheC-like domain VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 SUPERFAMILY SSF103039 54 230 5.06E-22 T 22-04-2016 IPR028976 CheC-like domain VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 SUPERFAMILY SSF103039 4 13 5.06E-22 T 22-04-2016 IPR028976 CheC-like domain VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 SUPERFAMILY SSF101801 248 323 1.96E-13 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 250 319 1.1E-16 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 PIRSF PIRSF002888 1 328 6.5E-92 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 Gene3D G3DSA:2.30.330.10 243 323 6.9E-9 T 22-04-2016 VCLMA_RS09800 942293afdb6c941507d2967aaf04d58b 349 PANTHER PTHR30034 2 349 1.6E-150 T 22-04-2016 VCLMA_RS08500 a4a9f371579d1c315457319cf9d816b9 224 PANTHER PTHR38108:SF1 1 224 1.6E-77 T 22-04-2016 VCLMA_RS08500 a4a9f371579d1c315457319cf9d816b9 224 PANTHER PTHR38108 1 224 1.6E-77 T 22-04-2016 VCLMA_RS08500 a4a9f371579d1c315457319cf9d816b9 224 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 25 219 1.4E-47 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VCLMA_RS08500 a4a9f371579d1c315457319cf9d816b9 224 Hamap MF_00789 UPF0319 protein YccT [yccT]. 5 222 27.331 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 PANTHER PTHR30033:SF1 1 624 4.4E-125 T 22-04-2016 VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 578 622 5.1E-9 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 8.5E-9 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 8.5E-9 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 8.5E-9 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 8.5E-9 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 PANTHER PTHR30033 1 624 4.4E-125 T 22-04-2016 VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 SUPERFAMILY SSF64518 455 622 3.01E-26 T 22-04-2016 VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 SUPERFAMILY SSF64518 167 359 3.01E-26 T 22-04-2016 VCLMA_RS10165 af5dc1cc4901d8427d01660756a716ad 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 348 2.9E-59 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VCLMA_RS08075 c568d43428d57eacee666071a103b6c7 243 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 37 205 1.3E-66 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VCLMA_RS08075 c568d43428d57eacee666071a103b6c7 243 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 214 1.2E-86 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VCLMA_RS08075 c568d43428d57eacee666071a103b6c7 243 SUPERFAMILY SSF55729 4 232 3.07E-85 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS08075 c568d43428d57eacee666071a103b6c7 243 PANTHER PTHR30098 1 243 5.4E-93 T 22-04-2016 VCLMA_RS08075 c568d43428d57eacee666071a103b6c7 243 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 243 87.221 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 VCLMA_RS08075 c568d43428d57eacee666071a103b6c7 243 PANTHER PTHR30098:SF2 1 243 5.4E-93 T 22-04-2016 VCLMA_RS11755 8704dc0c22806312bcf86852d1baf70c 164 Pfam PF03968 OstA-like protein 30 141 1.4E-28 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal VCLMA_RS11755 8704dc0c22806312bcf86852d1baf70c 164 Gene3D G3DSA:2.60.450.10 21 156 4.4E-37 T 22-04-2016 VCLMA_RS11755 8704dc0c22806312bcf86852d1baf70c 164 PANTHER PTHR36504 6 164 4.0E-53 T 22-04-2016 VCLMA_RS11755 8704dc0c22806312bcf86852d1baf70c 164 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 160 24.07 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VCLMA_RS11755 8704dc0c22806312bcf86852d1baf70c 164 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 160 2.1E-46 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VCLMA_RS11795 20e6a3796702d4ad5c05cb34beba15eb 447 PANTHER PTHR30624:SF1 2 447 2.9E-188 T 22-04-2016 VCLMA_RS11795 20e6a3796702d4ad5c05cb34beba15eb 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 8.9E-51 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- VCLMA_RS11795 20e6a3796702d4ad5c05cb34beba15eb 447 SUPERFAMILY SSF111283 12 447 5.1E-125 T 22-04-2016 VCLMA_RS11795 20e6a3796702d4ad5c05cb34beba15eb 447 PANTHER PTHR30624 2 447 2.9E-188 T 22-04-2016 VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 136 3.4E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 SUPERFAMILY SSF55326 3 137 4.45E-33 T 22-04-2016 VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 PIRSF PIRSF005303 1 320 7.8E-85 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 299 2.3E-10 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 Gene3D G3DSA:3.30.1330.10 3 140 1.6E-43 T 22-04-2016 IPR016188 PurM-like, N-terminal domain VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 317 29.634 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 Gene3D G3DSA:3.90.650.10 144 320 7.3E-46 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 SUPERFAMILY SSF56042 142 300 2.69E-34 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 2.6E-104 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 PANTHER PTHR30270:SF0 1 321 2.9E-139 T 22-04-2016 VCLMA_RS10520 f687d0716887a9347827952d56753f14 324 PANTHER PTHR30270 1 321 2.9E-139 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 VCLMA_RS01670 41afdd9f31805acadd6507d9e91b0d0c 353 PANTHER PTHR32120 4 352 1.2E-158 T 22-04-2016 VCLMA_RS01670 41afdd9f31805acadd6507d9e91b0d0c 353 PANTHER PTHR32120:SF2 4 352 1.2E-158 T 22-04-2016 VCLMA_RS01670 41afdd9f31805acadd6507d9e91b0d0c 353 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 334 1.4E-85 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VCLMA_RS01670 41afdd9f31805acadd6507d9e91b0d0c 353 Pfam PF03193 Protein of unknown function, DUF258 99 276 2.5E-56 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 VCLMA_RS01670 41afdd9f31805acadd6507d9e91b0d0c 353 Gene3D G3DSA:1.10.40.50 276 344 3.1E-22 T 22-04-2016 VCLMA_RS01670 41afdd9f31805acadd6507d9e91b0d0c 353 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 40 340 36.207 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 VCLMA_RS01670 41afdd9f31805acadd6507d9e91b0d0c 353 SUPERFAMILY SSF52540 113 338 1.67E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01670 41afdd9f31805acadd6507d9e91b0d0c 353 Gene3D G3DSA:3.40.50.300 114 275 1.9E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 Gene3D G3DSA:3.40.50.300 8 279 1.0E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 Gene3D G3DSA:3.40.50.300 322 535 2.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 SMART SM00382 31 236 2.3E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 SMART SM00382 348 522 4.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 SUPERFAMILY SSF52540 9 243 1.65E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 Pfam PF12848 ABC transporter 230 306 3.5E-13 T 22-04-2016 IPR032781 ABC-transporter extension domain VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 2.5E-293 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 Pfam PF00005 ABC transporter 340 473 1.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 Pfam PF00005 ABC transporter 22 191 6.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 SUPERFAMILY SSF52540 302 526 1.12E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS03395 b3b7d82aa8ae5cbac61f4780d8530f96 555 PANTHER PTHR19211:SF7 1 555 0.0 T 22-04-2016 VCLMA_RS02060 b3457f31fc643887204689ff0b82a7a4 184 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02060 b3457f31fc643887204689ff0b82a7a4 184 SUPERFAMILY SSF54523 8 94 7.77E-13 T 22-04-2016 VCLMA_RS02060 b3457f31fc643887204689ff0b82a7a4 184 Pfam PF13633 Prokaryotic N-terminal methylation site 5 29 6.4E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02060 b3457f31fc643887204689ff0b82a7a4 184 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 5.3E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS02060 b3457f31fc643887204689ff0b82a7a4 184 PANTHER PTHR30093 1 79 2.8E-14 T 22-04-2016 VCLMA_RS02060 b3457f31fc643887204689ff0b82a7a4 184 Gene3D G3DSA:3.30.700.10 8 57 2.4E-6 T 22-04-2016 VCLMA_RS03740 1fc5ae7bac4be854325c4b747366a1eb 197 PANTHER PTHR30178 1 195 1.8E-140 T 22-04-2016 VCLMA_RS03740 1fc5ae7bac4be854325c4b747366a1eb 197 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VCLMA_RS03740 1fc5ae7bac4be854325c4b747366a1eb 197 Pfam PF01184 GPR1/FUN34/yaaH family 3 181 1.1E-35 T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VCLMA_RS03740 1fc5ae7bac4be854325c4b747366a1eb 197 PANTHER PTHR30178:SF6 1 195 1.8E-140 T 22-04-2016 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 PANTHER PTHR23135 1 440 3.6E-159 T 22-04-2016 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 Gene3D G3DSA:3.40.50.720 8 96 3.4E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 PANTHER PTHR23135:SF2 1 440 3.6E-159 T 22-04-2016 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 Gene3D G3DSA:3.90.190.20 304 435 5.7E-40 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 SUPERFAMILY SSF53623 98 300 5.76E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 SUPERFAMILY SSF51984 8 97 6.28E-18 T 22-04-2016 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 439 33.614 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 9 437 1.0E-147 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 Pfam PF08245 Mur ligase middle domain 113 282 6.0E-32 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 SUPERFAMILY SSF53244 302 439 2.79E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 Gene3D G3DSA:3.40.1190.10 97 302 3.8E-62 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 VCLMA_RS11130 d73798fbc0d9f21bcd5d893fc5569fc9 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 374 1.6E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 Pfam PF13426 PAS domain 137 235 1.8E-8 T 22-04-2016 IPR000014 PAS domain VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 PANTHER PTHR33121:SF10 179 695 4.8E-226 T 22-04-2016 VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 SMART SM00091 126 192 2.1E-4 T 22-04-2016 IPR000014 PAS domain VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 SUPERFAMILY SSF55785 136 235 1.4E-17 T 22-04-2016 IPR000014 PAS domain VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 SUPERFAMILY SSF141868 420 664 6.8E-70 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 Gene3D G3DSA:3.30.450.20 127 230 2.6E-14 T 22-04-2016 VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 PANTHER PTHR33121 179 695 4.8E-226 T 22-04-2016 VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 Pfam PF00563 EAL domain 422 656 1.1E-62 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 SMART SM00052 414 661 3.4E-67 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 Gene3D G3DSA:3.10.580.10 700 817 8.5E-10 T 22-04-2016 VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 Gene3D G3DSA:3.20.20.450 418 663 1.9E-73 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 SUPERFAMILY SSF54631 699 817 1.77E-9 T 22-04-2016 VCLMA_RS07965 f9bc1c781c2f138b97e99e8e8f7cbeee 818 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 236 1.2E-12 T 22-04-2016 IPR000014 PAS domain VCLMA_RS04255 3eab78e3f44c8f18a80bea895aba2cfd 186 PANTHER PTHR23133 1 183 1.9E-71 T 22-04-2016 VCLMA_RS04255 3eab78e3f44c8f18a80bea895aba2cfd 186 PANTHER PTHR23133:SF3 1 183 1.9E-71 T 22-04-2016 VCLMA_RS04255 3eab78e3f44c8f18a80bea895aba2cfd 186 Gene3D G3DSA:3.40.50.1000 3 181 2.2E-61 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS04255 3eab78e3f44c8f18a80bea895aba2cfd 186 PIRSF PIRSF004682 1 185 5.1E-64 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VCLMA_RS04255 3eab78e3f44c8f18a80bea895aba2cfd 186 Pfam PF13242 HAD-hyrolase-like 107 176 1.5E-12 T 22-04-2016 VCLMA_RS04255 3eab78e3f44c8f18a80bea895aba2cfd 186 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.8E-79 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VCLMA_RS04255 3eab78e3f44c8f18a80bea895aba2cfd 186 SUPERFAMILY SSF56784 4 182 1.49E-50 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS04255 3eab78e3f44c8f18a80bea895aba2cfd 186 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 5.6E-37 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VCLMA_RS04255 3eab78e3f44c8f18a80bea895aba2cfd 186 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 152 1.2E-39 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VCLMA_RS09325 916ddbfe5ab0d1239f50a7ec1f7557bc 193 PANTHER PTHR11746:SF102 119 193 1.4E-34 T 22-04-2016 VCLMA_RS09325 916ddbfe5ab0d1239f50a7ec1f7557bc 193 SUPERFAMILY SSF52972 1 186 1.37E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VCLMA_RS09325 916ddbfe5ab0d1239f50a7ec1f7557bc 193 Hamap MF_00528 Septum formation protein Maf [maf]. 5 192 30.236 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VCLMA_RS09325 916ddbfe5ab0d1239f50a7ec1f7557bc 193 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 185 1.2E-51 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VCLMA_RS09325 916ddbfe5ab0d1239f50a7ec1f7557bc 193 Pfam PF02545 Maf-like protein 5 187 3.7E-45 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VCLMA_RS09325 916ddbfe5ab0d1239f50a7ec1f7557bc 193 PANTHER PTHR11746 119 193 1.4E-34 T 22-04-2016 VCLMA_RS09325 916ddbfe5ab0d1239f50a7ec1f7557bc 193 Gene3D G3DSA:3.90.950.10 3 190 3.0E-54 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like VCLMA_RS09325 916ddbfe5ab0d1239f50a7ec1f7557bc 193 PIRSF PIRSF006305 1 193 1.0E-43 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 VCLMA_RS03435 504d75020b507ebfe1f20218d7b98783 241 PANTHER PTHR37423 1 240 3.8E-116 T 22-04-2016 VCLMA_RS03435 504d75020b507ebfe1f20218d7b98783 241 SUPERFAMILY SSF48452 24 119 4.14E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS03435 504d75020b507ebfe1f20218d7b98783 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 241 47.901 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD VCLMA_RS03435 504d75020b507ebfe1f20218d7b98783 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 9 239 1.2E-79 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD VCLMA_RS03435 504d75020b507ebfe1f20218d7b98783 241 Pfam PF13525 Outer membrane lipoprotein 26 235 9.5E-81 T 22-04-2016 VCLMA_RS03435 504d75020b507ebfe1f20218d7b98783 241 Gene3D G3DSA:1.25.40.10 31 182 9.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS00230 38674c09345d1b85dbcca3eab6489507 375 PANTHER PTHR34700:SF2 1 351 4.1E-134 T 22-04-2016 VCLMA_RS00230 38674c09345d1b85dbcca3eab6489507 375 Pfam PF01476 LysM domain 40 85 1.7E-12 T 22-04-2016 IPR018392 LysM domain VCLMA_RS00230 38674c09345d1b85dbcca3eab6489507 375 PANTHER PTHR34700 1 351 4.1E-134 T 22-04-2016 VCLMA_RS00230 38674c09345d1b85dbcca3eab6489507 375 SUPERFAMILY SSF54106 38 86 3.4E-7 T 22-04-2016 IPR018392 LysM domain VCLMA_RS00230 38674c09345d1b85dbcca3eab6489507 375 SMART SM00257 39 87 3.9E-7 T 22-04-2016 IPR018392 LysM domain VCLMA_RS00230 38674c09345d1b85dbcca3eab6489507 375 Gene3D G3DSA:3.10.350.10 37 86 6.7E-8 T 22-04-2016 IPR018392 LysM domain VCLMA_RS12260 c412734933f021fa602557e1c64cf360 172 PIRSF PIRSF016481 1 172 1.1E-73 T 22-04-2016 IPR007446 Pilus assembly protein PilP VCLMA_RS12260 c412734933f021fa602557e1c64cf360 172 Pfam PF04351 Pilus assembly protein, PilP 25 171 1.3E-43 T 22-04-2016 IPR007446 Pilus assembly protein PilP VCLMA_RS11555 3295469d48d0c820c2b7318f904a03db 263 PANTHER PTHR23054:SF21 74 240 2.9E-40 T 22-04-2016 VCLMA_RS11555 3295469d48d0c820c2b7318f904a03db 263 Pfam PF04784 Protein of unknown function, DUF547 87 198 6.8E-27 T 22-04-2016 IPR006869 Domain of unknown function DUF547 VCLMA_RS11555 3295469d48d0c820c2b7318f904a03db 263 PANTHER PTHR23054 74 240 2.9E-40 T 22-04-2016 VCLMA_RS07700 90cda5fbc7a123d71b2aa9c4ae5c75af 287 PANTHER PTHR12715 1 278 1.1E-31 T 22-04-2016 VCLMA_RS07700 90cda5fbc7a123d71b2aa9c4ae5c75af 287 SUPERFAMILY SSF103481 40 141 1.07E-10 T 22-04-2016 VCLMA_RS07700 90cda5fbc7a123d71b2aa9c4ae5c75af 287 SUPERFAMILY SSF103481 181 279 1.96E-11 T 22-04-2016 VCLMA_RS07700 90cda5fbc7a123d71b2aa9c4ae5c75af 287 Pfam PF00892 EamA-like transporter family 149 278 2.9E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS07700 90cda5fbc7a123d71b2aa9c4ae5c75af 287 Pfam PF00892 EamA-like transporter family 7 137 7.5E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS09470 fb23c895f855609a266465d4ebb6726d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 6.6E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09470 fb23c895f855609a266465d4ebb6726d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 6.6E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09470 fb23c895f855609a266465d4ebb6726d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 6.6E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09470 fb23c895f855609a266465d4ebb6726d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 6.6E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09470 fb23c895f855609a266465d4ebb6726d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 6.6E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09470 fb23c895f855609a266465d4ebb6726d 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 6.6E-65 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS09470 fb23c895f855609a266465d4ebb6726d 250 Pfam PF01578 Cytochrome C assembly protein 30 184 9.2E-30 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VCLMA_RS09470 fb23c895f855609a266465d4ebb6726d 250 PANTHER PTHR30071 1 224 2.7E-87 T 22-04-2016 VCLMA_RS09470 fb23c895f855609a266465d4ebb6726d 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 6.3E-85 T 22-04-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VCLMA_RS11650 33b1150d8deb5a513b9910c78702dcb1 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS11650 33b1150d8deb5a513b9910c78702dcb1 245 PANTHER PTHR11079:SF86 3 237 2.4E-79 T 22-04-2016 VCLMA_RS11650 33b1150d8deb5a513b9910c78702dcb1 245 Pfam PF00849 RNA pseudouridylate synthase 22 168 8.2E-28 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS11650 33b1150d8deb5a513b9910c78702dcb1 245 SUPERFAMILY SSF55120 14 220 2.08E-63 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS11650 33b1150d8deb5a513b9910c78702dcb1 245 PANTHER PTHR11079 3 237 2.4E-79 T 22-04-2016 VCLMA_RS09650 232398cca56889f8edd3e2ebdfa16d7e 252 PANTHER PTHR13799 1 248 1.7E-83 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VCLMA_RS09650 232398cca56889f8edd3e2ebdfa16d7e 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 4.6E-65 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VCLMA_RS09650 232398cca56889f8edd3e2ebdfa16d7e 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 238 1.4E-58 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VCLMA_RS09650 232398cca56889f8edd3e2ebdfa16d7e 252 Gene3D G3DSA:3.40.1390.30 108 219 6.8E-27 T 22-04-2016 VCLMA_RS09650 232398cca56889f8edd3e2ebdfa16d7e 252 SUPERFAMILY SSF102705 1 251 1.16E-82 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VCLMA_RS09650 232398cca56889f8edd3e2ebdfa16d7e 252 Gene3D G3DSA:3.40.1390.30 1 107 3.1E-39 T 22-04-2016 VCLMA_RS12685 df00367ad03d1ba80b5bf3aac397a5e8 252 Pfam PF01203 Type II secretion system (T2SS), protein N 37 247 1.3E-60 T 22-04-2016 IPR022792 Type II secretion system, protein N VCLMA_RS12685 df00367ad03d1ba80b5bf3aac397a5e8 252 ProSitePatterns PS01142 Bacterial type II secretion system protein N signature. 45 67 - T 22-04-2016 IPR000645 Type II secretion system protein N, conserved site GO:0008565|GO:0015627|GO:0015628 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PANTHER PTHR30222:SF10 1 338 3.5E-163 T 22-04-2016 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 91 104 1.222933E-70 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 148 162 1.222933E-70 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 203 222 1.222933E-70 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 1.222933E-70 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 75 89 1.222933E-70 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 247 266 1.222933E-70 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 1.222933E-70 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 1.222933E-70 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 166 185 1.222933E-70 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PIRSF PIRSF019574 1 343 1.5E-109 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 Pfam PF13416 Bacterial extracellular solute-binding protein 42 301 4.8E-38 T 22-04-2016 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 Gene3D G3DSA:3.40.190.10 27 143 1.3E-23 T 22-04-2016 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 SUPERFAMILY SSF53850 26 330 7.39E-87 T 22-04-2016 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 PANTHER PTHR30222 1 338 3.5E-163 T 22-04-2016 VCLMA_RS06710 e21e29f2dada3bbbe28040a00c070c16 343 Gene3D G3DSA:3.40.190.10 144 287 1.2E-56 T 22-04-2016 VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 PANTHER PTHR12586:SF3 8 445 3.6E-264 T 22-04-2016 VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 SUPERFAMILY SSF56024 7 184 1.55E-25 T 22-04-2016 VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 Pfam PF13091 PLD-like domain 251 402 6.5E-27 T 22-04-2016 IPR025202 Phospholipase D-like domain VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 PIRSF PIRSF000850 1 446 1.5E-240 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 PANTHER PTHR12586 8 445 3.6E-264 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 SUPERFAMILY SSF56024 245 408 4.19E-27 T 22-04-2016 VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 SMART SM00155 347 374 0.011 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 SMART SM00155 126 152 0.0015 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 Gene3D G3DSA:3.30.870.10 21 182 8.9E-16 T 22-04-2016 VCLMA_RS01525 823b78d2f66d09c1c72f4257c21c4de6 446 Gene3D G3DSA:3.30.870.10 244 408 4.0E-21 T 22-04-2016 VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 ProSitePatterns PS00618 RecF protein signature 2. 303 321 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 Gene3D G3DSA:3.40.50.300 235 343 6.3E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 Gene3D G3DSA:3.40.50.300 1 176 6.3E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 1.2E-115 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 359 1.0E-33 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 PANTHER PTHR32182:SF0 1 362 3.6E-76 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 363 95.482 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 ProSitePatterns PS00617 RecF protein signature 1. 122 142 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 PANTHER PTHR32182 1 362 3.6E-76 T 22-04-2016 VCLMA_RS00065 d607e36a00e476d0ebc0c0305b906a2d 363 SUPERFAMILY SSF52540 1 343 2.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS14630 5baa3d7845ed57a9f79a018651087ae4 173 SUPERFAMILY SSF64484 3 173 8.7E-95 T 22-04-2016 VCLMA_RS14630 5baa3d7845ed57a9f79a018651087ae4 173 Pfam PF04997 RNA polymerase Rpb1, domain 1 3 30 5.4E-8 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14630 5baa3d7845ed57a9f79a018651087ae4 173 SMART SM00663 1 173 6.6E-67 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14630 5baa3d7845ed57a9f79a018651087ae4 173 PANTHER PTHR19376:SF32 4 173 3.8E-118 T 22-04-2016 VCLMA_RS14630 5baa3d7845ed57a9f79a018651087ae4 173 PANTHER PTHR19376 4 173 3.8E-118 T 22-04-2016 VCLMA_RS14630 5baa3d7845ed57a9f79a018651087ae4 173 Gene3D G3DSA:2.40.40.20 105 173 4.4E-38 T 22-04-2016 VCLMA_RS14630 5baa3d7845ed57a9f79a018651087ae4 173 Gene3D G3DSA:2.40.40.20 37 64 4.4E-38 T 22-04-2016 VCLMA_RS14630 5baa3d7845ed57a9f79a018651087ae4 173 Pfam PF00623 RNA polymerase Rpb1, domain 2 32 85 1.9E-9 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS14630 5baa3d7845ed57a9f79a018651087ae4 173 Pfam PF00623 RNA polymerase Rpb1, domain 2 77 173 6.3E-29 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 VCLMA_RS06290 1923fc1511cfe04034c313788ceb01cc 507 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 4.0E-140 T 22-04-2016 IPR002823 Protein of unknown function DUF112, transmembrane VCLMA_RS06290 1923fc1511cfe04034c313788ceb01cc 507 PANTHER PTHR35342 1 507 0.0 T 22-04-2016 VCLMA_RS06290 1923fc1511cfe04034c313788ceb01cc 507 PANTHER PTHR35342:SF2 1 507 0.0 T 22-04-2016 VCLMA_RS11620 ba9519958b2af0a0b8629c80564b71ce 356 PANTHER PTHR33529:SF1 1 355 2.6E-156 T 22-04-2016 VCLMA_RS11620 ba9519958b2af0a0b8629c80564b71ce 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 352 2.6E-66 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 VCLMA_RS11620 ba9519958b2af0a0b8629c80564b71ce 356 PANTHER PTHR33529 1 355 2.6E-156 T 22-04-2016 VCLMA_RS11620 ba9519958b2af0a0b8629c80564b71ce 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 1.9E-131 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 Pfam PF00672 HAMP domain 196 266 2.5E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 PANTHER PTHR32089:SF34 83 546 2.1E-159 T 22-04-2016 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 Gene3D G3DSA:1.10.287.950 299 515 5.1E-54 T 22-04-2016 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 PANTHER PTHR32089 83 546 2.1E-159 T 22-04-2016 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 SMART SM01049 38 132 1.8E-42 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 SUPERFAMILY SSF58104 237 546 8.63E-72 T 22-04-2016 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 544 5.5E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 SMART SM00304 215 269 1.4E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 SMART SM00283 284 545 6.3E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 Pfam PF17200 Single Cache domain 2 42 188 1.7E-49 T 22-04-2016 IPR033480 Single Cache domain 2 VCLMA_RS01355 4a603f7bf52087a106923ecc594c0517 546 Gene3D G3DSA:3.30.450.20 30 185 5.4E-59 T 22-04-2016 VCLMA_RS12430 a62196109cc4743d1290e8e142408c84 257 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 251 39.586 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VCLMA_RS12430 a62196109cc4743d1290e8e142408c84 257 SUPERFAMILY SSF51351 2 251 1.96E-89 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VCLMA_RS12430 a62196109cc4743d1290e8e142408c84 257 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 3.2E-79 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VCLMA_RS12430 a62196109cc4743d1290e8e142408c84 257 Gene3D G3DSA:3.20.20.70 1 253 1.3E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS12430 a62196109cc4743d1290e8e142408c84 257 Pfam PF00121 Triosephosphate isomerase 5 247 1.6E-87 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VCLMA_RS12430 a62196109cc4743d1290e8e142408c84 257 PANTHER PTHR21139 1 257 8.7E-124 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VCLMA_RS12430 a62196109cc4743d1290e8e142408c84 257 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 VCLMA_RS00995 e7c61a895ef782559e0b2f25b70a528b 481 PANTHER PTHR30175:SF3 1 481 2.1E-231 T 22-04-2016 VCLMA_RS00995 e7c61a895ef782559e0b2f25b70a528b 481 SUPERFAMILY SSF55604 9 80 1.12E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS00995 e7c61a895ef782559e0b2f25b70a528b 481 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VCLMA_RS00995 e7c61a895ef782559e0b2f25b70a528b 481 Pfam PF00367 phosphotransferase system, EIIB 11 43 2.2E-10 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VCLMA_RS00995 e7c61a895ef782559e0b2f25b70a528b 481 Gene3D G3DSA:3.30.1360.60 6 83 1.9E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VCLMA_RS00995 e7c61a895ef782559e0b2f25b70a528b 481 PANTHER PTHR30175 1 481 2.1E-231 T 22-04-2016 VCLMA_RS00995 e7c61a895ef782559e0b2f25b70a528b 481 Pfam PF02378 Phosphotransferase system, EIIC 127 408 1.3E-30 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VCLMA_RS00425 7d153d7263733e51d33ae02113ca24eb 510 PANTHER PTHR30563 2 510 1.3E-140 T 22-04-2016 VCLMA_RS00425 7d153d7263733e51d33ae02113ca24eb 510 Pfam PF02646 RmuC family 181 477 2.3E-105 T 22-04-2016 IPR003798 DNA recombination RmuC VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.895 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 SUPERFAMILY SSF53383 5 390 2.15E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 Gene3D G3DSA:3.40.640.10 17 254 3.3E-98 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 Pfam PF00266 Aminotransferase class-V 5 368 1.7E-87 T 22-04-2016 IPR000192 Aminotransferase class V domain VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 PANTHER PTHR11601:SF45 4 404 6.8E-239 T 22-04-2016 VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 6.8E-231 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 Gene3D G3DSA:3.90.1150.10 255 374 8.6E-52 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 PIRSF PIRSF005572 2 384 2.5E-137 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VCLMA_RS03630 14990e558330af725a942c3869c915cb 404 PANTHER PTHR11601 4 404 6.8E-239 T 22-04-2016 VCLMA_RS10530 33e0c440224c2913b8d2ec68861a26fb 156 Gene3D G3DSA:3.40.50.960 3 154 6.3E-65 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10530 33e0c440224c2913b8d2ec68861a26fb 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.34 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10530 33e0c440224c2913b8d2ec68861a26fb 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 6.5E-55 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10530 33e0c440224c2913b8d2ec68861a26fb 156 PANTHER PTHR21058 1 155 3.3E-78 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10530 33e0c440224c2913b8d2ec68861a26fb 156 SUPERFAMILY SSF52121 4 154 1.27E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS10530 33e0c440224c2913b8d2ec68861a26fb 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 3.8E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 VCLMA_RS08755 6d53c189b26c4313718646b3891b714a 398 SUPERFAMILY SSF53335 120 207 5.49E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS08755 6d53c189b26c4313718646b3891b714a 398 Gene3D G3DSA:3.40.50.150 119 193 2.3E-4 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS08755 6d53c189b26c4313718646b3891b714a 398 PANTHER PTHR13369 32 250 1.4E-162 T 22-04-2016 VCLMA_RS08755 6d53c189b26c4313718646b3891b714a 398 PANTHER PTHR13369 323 398 1.4E-162 T 22-04-2016 VCLMA_RS08755 6d53c189b26c4313718646b3891b714a 398 PANTHER PTHR13369:SF1 32 250 1.4E-162 T 22-04-2016 VCLMA_RS08755 6d53c189b26c4313718646b3891b714a 398 PANTHER PTHR13369:SF1 323 398 1.4E-162 T 22-04-2016 VCLMA_RS08755 6d53c189b26c4313718646b3891b714a 398 Pfam PF13679 Methyltransferase domain 106 230 4.1E-18 T 22-04-2016 IPR025714 Methyltransferase domain VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 Gene3D G3DSA:3.40.190.10 152 312 1.7E-12 T 22-04-2016 VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 PANTHER PTHR30006:SF12 4 205 4.2E-185 T 22-04-2016 VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 PANTHER PTHR30006:SF12 223 379 4.2E-185 T 22-04-2016 VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 Gene3D G3DSA:3.40.190.10 313 343 1.2E-19 T 22-04-2016 VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 Gene3D G3DSA:3.40.190.10 30 150 1.2E-19 T 22-04-2016 VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 Pfam PF13416 Bacterial extracellular solute-binding protein 57 326 5.1E-25 T 22-04-2016 VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 SUPERFAMILY SSF53850 31 377 6.85E-41 T 22-04-2016 VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 PIRSF PIRSF029172 1 380 5.4E-181 T 22-04-2016 IPR027020 Protein ynjB VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 PANTHER PTHR30006 4 205 4.2E-185 T 22-04-2016 VCLMA_RS07740 6555813aafe4464fd8b56aed000ebda1 382 PANTHER PTHR30006 223 379 4.2E-185 T 22-04-2016 VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 Gene3D G3DSA:2.40.50.140 405 467 8.4E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 PANTHER PTHR11918:SF57 10 468 8.2E-246 T 22-04-2016 VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 Gene3D G3DSA:3.80.30.20 163 402 1.8E-73 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 34 463 2.0E-110 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 SUPERFAMILY SSF102114 131 395 6.54E-53 T 22-04-2016 VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 PANTHER PTHR11918 10 468 8.2E-246 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 Pfam PF04055 Radical SAM superfamily 171 348 6.0E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 34 463 3.6E-188 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 SMART SM00729 165 390 4.0E-57 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 169 189 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 33 465 63.193 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 VCLMA_RS12205 425f8a3889adfee3e8ec9b3a85bd3510 470 Pfam PF00919 Uncharacterized protein family UPF0004 34 122 4.8E-22 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 VCLMA_RS11485 a3636c1b7c1a50bf04c2f8eed2965b6d 194 PANTHER PTHR23407 1 194 1.7E-66 T 22-04-2016 VCLMA_RS11485 a3636c1b7c1a50bf04c2f8eed2965b6d 194 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 188 7.8E-45 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VCLMA_RS11485 a3636c1b7c1a50bf04c2f8eed2965b6d 194 Gene3D G3DSA:3.40.50.10420 5 193 3.9E-57 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain VCLMA_RS11485 a3636c1b7c1a50bf04c2f8eed2965b6d 194 SUPERFAMILY SSF100950 4 194 3.91E-57 T 22-04-2016 VCLMA_RS11485 a3636c1b7c1a50bf04c2f8eed2965b6d 194 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 188 3.8E-54 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VCLMA_RS11485 a3636c1b7c1a50bf04c2f8eed2965b6d 194 PANTHER PTHR23407:SF1 1 194 1.7E-66 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VCLMA_RS11485 a3636c1b7c1a50bf04c2f8eed2965b6d 194 PIRSF PIRSF006806 1 191 2.8E-38 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase VCLMA_RS01215 bdbd9a3b5e3474011d35da8aff401910 188 PANTHER PTHR23416 10 84 4.1E-14 T 22-04-2016 VCLMA_RS01215 bdbd9a3b5e3474011d35da8aff401910 188 PANTHER PTHR23416 113 170 4.1E-14 T 22-04-2016 VCLMA_RS01215 bdbd9a3b5e3474011d35da8aff401910 188 Gene3D G3DSA:2.160.10.10 18 176 1.9E-28 T 22-04-2016 VCLMA_RS01215 bdbd9a3b5e3474011d35da8aff401910 188 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 155 6.6E-5 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS01215 bdbd9a3b5e3474011d35da8aff401910 188 SUPERFAMILY SSF51161 20 171 2.04E-25 T 22-04-2016 IPR011004 Trimeric LpxA-like VCLMA_RS08995 78b5d2b7b4350023a56d6190fa4c59bb 270 Gene3D G3DSA:3.40.50.300 1 248 9.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08995 78b5d2b7b4350023a56d6190fa4c59bb 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 1.6E-26 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VCLMA_RS08995 78b5d2b7b4350023a56d6190fa4c59bb 270 PIRSF PIRSF003092 1 270 3.6E-95 T 22-04-2016 IPR025501 ATP binding protein MinD VCLMA_RS08995 78b5d2b7b4350023a56d6190fa4c59bb 270 PANTHER PTHR13696 1 258 2.7E-94 T 22-04-2016 VCLMA_RS08995 78b5d2b7b4350023a56d6190fa4c59bb 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 268 3.3E-111 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 VCLMA_RS08995 78b5d2b7b4350023a56d6190fa4c59bb 270 SUPERFAMILY SSF52540 1 268 1.22E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS08995 78b5d2b7b4350023a56d6190fa4c59bb 270 PANTHER PTHR13696:SF1 1 258 2.7E-94 T 22-04-2016 VCLMA_RS07080 b5cc281a9d648bdf633321848029a0ad 203 Pfam PF12804 MobA-like NTP transferase domain 18 166 4.8E-36 T 22-04-2016 IPR025877 MobA-like NTP transferase VCLMA_RS07080 b5cc281a9d648bdf633321848029a0ad 203 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 16 196 1.6E-71 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VCLMA_RS07080 b5cc281a9d648bdf633321848029a0ad 203 PANTHER PTHR19136 7 202 2.7E-55 T 22-04-2016 VCLMA_RS07080 b5cc281a9d648bdf633321848029a0ad 203 SUPERFAMILY SSF53448 18 195 4.51E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS07080 b5cc281a9d648bdf633321848029a0ad 203 PANTHER PTHR19136:SF81 7 202 2.7E-55 T 22-04-2016 VCLMA_RS07080 b5cc281a9d648bdf633321848029a0ad 203 Gene3D G3DSA:3.90.550.10 13 200 8.6E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS07080 b5cc281a9d648bdf633321848029a0ad 203 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 13 198 30.225 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 VCLMA_RS06785 51b1957681c042f3a5ca90e4cf021736 54 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 8.2E-15 T 22-04-2016 IPR008621 Cbb3-type cytochrome oxidase component VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 SUPERFAMILY SSF54211 1 181 1.47E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 Gene3D G3DSA:3.30.230.70 5 234 1.3E-35 T 22-04-2016 IPR027408 PNPase/RNase PH domain VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 2.7E-11 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 PANTHER PTHR11953:SF0 1 238 8.9E-90 T 22-04-2016 VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 SUPERFAMILY SSF55666 153 234 1.44E-25 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 48.629 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 4.0E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 8.0E-113 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 VCLMA_RS01010 c7bdca2cfb00744c322e3c7bb59ab44b 238 PANTHER PTHR11953 1 238 8.9E-90 T 22-04-2016 VCLMA_RS11520 c303dfc4a4514069b5c81810f7cd5393 362 Pfam PF13528 Glycosyl transferase family 1 2 299 2.1E-37 T 22-04-2016 VCLMA_RS11520 c303dfc4a4514069b5c81810f7cd5393 362 SUPERFAMILY SSF53756 11 300 2.51E-13 T 22-04-2016 VCLMA_RS11520 c303dfc4a4514069b5c81810f7cd5393 362 TIGRFAM TIGR00661 MJ1255: conserved hypothetical protein 2 311 1.2E-147 T 22-04-2016 IPR005262 Conserved hypothetical protein CHP00661 KEGG: 00540+2.4.-.- VCLMA_RS11520 c303dfc4a4514069b5c81810f7cd5393 362 Gene3D G3DSA:3.40.50.2000 218 301 7.0E-6 T 22-04-2016 VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.0E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 3 102 2.7E-43 T 22-04-2016 IPR027486 Ribosomal protein S10 domain VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12095 987e2811ffae0c9aeeddf6e4e23fbe37 103 PANTHER PTHR11700 1 102 1.5E-54 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 6.4E-71 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 SUPERFAMILY SSF82679 6 116 4.58E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 Pfam PF00467 KOW motif 131 162 2.2E-7 T 22-04-2016 IPR005824 KOW VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 Pfam PF02357 Transcription termination factor nusG 7 112 8.3E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 PANTHER PTHR30265 3 182 5.7E-86 T 22-04-2016 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 SMART SM00738 6 115 1.0E-50 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 Gene3D G3DSA:2.30.30.30 120 181 6.6E-32 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 SMART SM00739 127 154 3.2E-5 T 22-04-2016 IPR005824 KOW VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 6.8E-22 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 6.8E-22 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 6.8E-22 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 26.173 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 Gene3D G3DSA:3.30.70.940 6 117 5.5E-44 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 VCLMA_RS01585 f077bb7903556d73621a22a9f7d3134b 182 SUPERFAMILY SSF50104 125 181 7.07E-20 T 22-04-2016 IPR008991 Translation protein SH3-like domain VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 Pfam PF13609 Gram-negative porin 12 308 5.2E-31 T 22-04-2016 VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 PRINTS PR00184 Neisseria sp. porin signature 60 85 7.5E-11 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 PRINTS PR00184 Neisseria sp. porin signature 97 116 7.5E-11 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 PRINTS PR00184 Neisseria sp. porin signature 338 349 7.5E-11 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 PRINTS PR00184 Neisseria sp. porin signature 155 172 7.5E-11 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 Gene3D G3DSA:2.40.160.10 37 349 1.6E-36 T 22-04-2016 IPR023614 Porin domain VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 SUPERFAMILY SSF56935 36 349 2.47E-38 T 22-04-2016 VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 156 167 3.3E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 58 69 3.3E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 99 109 3.3E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VCLMA_RS04545 ac8aa8d9d58d488f0a348ecfac34d53d 349 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 341 349 3.3E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 VCLMA_RS08160 269097aba10d3b5af902e8d54a143143 400 PANTHER PTHR30629:SF2 1 392 1.9E-162 T 22-04-2016 VCLMA_RS08160 269097aba10d3b5af902e8d54a143143 400 Gene3D G3DSA:1.10.443.10 209 380 7.0E-25 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 VCLMA_RS08160 269097aba10d3b5af902e8d54a143143 400 Gene3D G3DSA:1.10.150.130 103 202 3.8E-15 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal VCLMA_RS08160 269097aba10d3b5af902e8d54a143143 400 PANTHER PTHR30629 1 392 1.9E-162 T 22-04-2016 VCLMA_RS08160 269097aba10d3b5af902e8d54a143143 400 Pfam PF13356 Domain of unknown function (DUF4102) 5 91 9.0E-21 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 VCLMA_RS08160 269097aba10d3b5af902e8d54a143143 400 SUPERFAMILY SSF56349 103 383 1.15E-57 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VCLMA_RS08160 269097aba10d3b5af902e8d54a143143 400 Pfam PF00589 Phage integrase family 210 373 8.9E-25 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VCLMA_RS12910 4af940b7cf5044b210d2f456b1b2f7fd 210 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VCLMA_RS12910 4af940b7cf5044b210d2f456b1b2f7fd 210 SUPERFAMILY SSF54211 4 134 2.77E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS12910 4af940b7cf5044b210d2f456b1b2f7fd 210 PANTHER PTHR16301 1 203 1.7E-62 T 22-04-2016 IPR023582 Impact family VCLMA_RS12910 4af940b7cf5044b210d2f456b1b2f7fd 210 Gene3D G3DSA:3.30.70.240 139 203 2.9E-12 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain VCLMA_RS12910 4af940b7cf5044b210d2f456b1b2f7fd 210 Gene3D G3DSA:3.30.230.30 7 135 2.9E-42 T 22-04-2016 IPR001498 Impact, N-terminal VCLMA_RS12910 4af940b7cf5044b210d2f456b1b2f7fd 210 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 9.0E-25 T 22-04-2016 IPR001498 Impact, N-terminal VCLMA_RS12910 4af940b7cf5044b210d2f456b1b2f7fd 210 SUPERFAMILY SSF54980 138 201 3.38E-9 T 22-04-2016 IPR009022 Elongation factor G, III-V domain VCLMA_RS12910 4af940b7cf5044b210d2f456b1b2f7fd 210 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 7.5E-12 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VCLMA_RS12910 4af940b7cf5044b210d2f456b1b2f7fd 210 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 4 201 1.7E-66 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal VCLMA_RS09860 dbc0144b07f2162af3f6f4460837a7fb 136 PANTHER PTHR34773 1 133 1.6E-46 T 22-04-2016 VCLMA_RS09860 dbc0144b07f2162af3f6f4460837a7fb 136 PIRSF PIRSF039090 1 133 4.5E-45 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VCLMA_RS09860 dbc0144b07f2162af3f6f4460837a7fb 136 Pfam PF02561 Flagellar protein FliS 6 122 5.6E-39 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VCLMA_RS09860 dbc0144b07f2162af3f6f4460837a7fb 136 SUPERFAMILY SSF101116 6 127 3.27E-40 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VCLMA_RS09860 dbc0144b07f2162af3f6f4460837a7fb 136 Gene3D G3DSA:1.20.120.340 6 127 9.7E-44 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VCLMA_RS09860 dbc0144b07f2162af3f6f4460837a7fb 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 4.5E-27 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 VCLMA_RS12145 7d56b58b502529afed8c1756b24fe4b9 196 Gene3D G3DSA:3.40.50.360 13 188 2.7E-51 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS12145 7d56b58b502529afed8c1756b24fe4b9 196 PANTHER PTHR10204:SF42 12 187 2.7E-80 T 22-04-2016 VCLMA_RS12145 7d56b58b502529afed8c1756b24fe4b9 196 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 8 190 48.417 T 22-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VCLMA_RS12145 7d56b58b502529afed8c1756b24fe4b9 196 Pfam PF02525 Flavodoxin-like fold 13 180 5.4E-45 T 22-04-2016 IPR003680 Flavodoxin-like fold VCLMA_RS12145 7d56b58b502529afed8c1756b24fe4b9 196 SUPERFAMILY SSF52218 13 186 2.02E-50 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS12145 7d56b58b502529afed8c1756b24fe4b9 196 PANTHER PTHR10204 12 187 2.7E-80 T 22-04-2016 VCLMA_RS12445 8e53ae99ad0524cfd427cc25e5ca93ab 305 PANTHER PTHR13929:SF0 2 301 3.2E-88 T 22-04-2016 VCLMA_RS12445 8e53ae99ad0524cfd427cc25e5ca93ab 305 PANTHER PTHR13929 2 301 3.2E-88 T 22-04-2016 VCLMA_RS12445 8e53ae99ad0524cfd427cc25e5ca93ab 305 Pfam PF01040 UbiA prenyltransferase family 20 270 2.3E-36 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 VCLMA_RS12445 8e53ae99ad0524cfd427cc25e5ca93ab 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.588 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 VCLMA_RS12445 8e53ae99ad0524cfd427cc25e5ca93ab 305 PIRSF PIRSF005355 1 303 5.1E-83 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 VCLMA_RS12445 8e53ae99ad0524cfd427cc25e5ca93ab 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 3.8E-98 T 22-04-2016 VCLMA_RS10430 933200b601128b4d5b689fb022020244 379 Gene3D G3DSA:3.40.50.2000 161 289 1.3E-4 T 22-04-2016 VCLMA_RS10430 933200b601128b4d5b689fb022020244 379 SUPERFAMILY SSF53756 6 378 1.44E-30 T 22-04-2016 VCLMA_RS10430 933200b601128b4d5b689fb022020244 379 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 43.337 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VCLMA_RS10430 933200b601128b4d5b689fb022020244 379 PANTHER PTHR30372 2 378 7.6E-136 T 22-04-2016 VCLMA_RS10430 933200b601128b4d5b689fb022020244 379 PANTHER PTHR30372:SF0 2 378 7.6E-136 T 22-04-2016 VCLMA_RS10430 933200b601128b4d5b689fb022020244 379 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 4.1E-143 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VCLMA_RS10430 933200b601128b4d5b689fb022020244 379 Pfam PF02684 Lipid-A-disaccharide synthetase 7 373 1.1E-131 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 VCLMA_RS07100 b937277e660e9fdb29a8dea64d1a1b6a 302 PANTHER PTHR18964:SF134 1 301 1.8E-161 T 22-04-2016 VCLMA_RS07100 b937277e660e9fdb29a8dea64d1a1b6a 302 Gene3D G3DSA:3.30.420.40 133 280 2.0E-44 T 22-04-2016 VCLMA_RS07100 b937277e660e9fdb29a8dea64d1a1b6a 302 Gene3D G3DSA:3.30.420.40 1 132 1.5E-37 T 22-04-2016 VCLMA_RS07100 b937277e660e9fdb29a8dea64d1a1b6a 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 63.143 T 22-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 VCLMA_RS07100 b937277e660e9fdb29a8dea64d1a1b6a 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family VCLMA_RS07100 b937277e660e9fdb29a8dea64d1a1b6a 302 SUPERFAMILY SSF53067 1 299 1.56E-56 T 22-04-2016 VCLMA_RS07100 b937277e660e9fdb29a8dea64d1a1b6a 302 Pfam PF00480 ROK family 2 300 6.0E-73 T 22-04-2016 IPR000600 ROK family VCLMA_RS07100 b937277e660e9fdb29a8dea64d1a1b6a 302 PANTHER PTHR18964 1 301 1.8E-161 T 22-04-2016 VCLMA_RS07380 96cea139d337e16be658053fb6a0d8cb 284 Pfam PF00563 EAL domain 9 240 6.8E-56 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07380 96cea139d337e16be658053fb6a0d8cb 284 SUPERFAMILY SSF141868 9 247 7.72E-63 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07380 96cea139d337e16be658053fb6a0d8cb 284 SMART SM00052 3 245 8.3E-28 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07380 96cea139d337e16be658053fb6a0d8cb 284 PANTHER PTHR33121:SF10 8 284 5.8E-74 T 22-04-2016 VCLMA_RS07380 96cea139d337e16be658053fb6a0d8cb 284 Gene3D G3DSA:3.20.20.450 8 241 6.5E-60 T 22-04-2016 IPR001633 EAL domain VCLMA_RS07380 96cea139d337e16be658053fb6a0d8cb 284 PANTHER PTHR33121 8 284 5.8E-74 T 22-04-2016 VCLMA_RS09205 141d81cf09d854432a9fd2c49eb17f5b 272 PIRSF PIRSF018249 1 272 4.1E-84 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VCLMA_RS09205 141d81cf09d854432a9fd2c49eb17f5b 272 Pfam PF13649 Methyltransferase domain 90 161 1.4E-11 T 22-04-2016 VCLMA_RS09205 141d81cf09d854432a9fd2c49eb17f5b 272 SUPERFAMILY SSF53335 5 254 4.0E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS09205 141d81cf09d854432a9fd2c49eb17f5b 272 PANTHER PTHR10108 15 204 6.6E-43 T 22-04-2016 VCLMA_RS09205 141d81cf09d854432a9fd2c49eb17f5b 272 PANTHER PTHR10108:SF886 15 204 6.6E-43 T 22-04-2016 VCLMA_RS09205 141d81cf09d854432a9fd2c49eb17f5b 272 Gene3D G3DSA:3.40.50.150 65 208 6.3E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS01195 64f1675c8d8e973045a9216715d200ad 77 Pfam PF00550 Phosphopantetheine attachment site 8 73 3.1E-4 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS01195 64f1675c8d8e973045a9216715d200ad 77 SUPERFAMILY SSF47336 4 75 1.1E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS01195 64f1675c8d8e973045a9216715d200ad 77 Gene3D G3DSA:1.10.1200.10 5 74 9.6E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 Pfam PF01047 MarR family 30 87 5.1E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 PANTHER PTHR33164 7 132 1.4E-28 T 22-04-2016 VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 PANTHER PTHR33164:SF16 7 132 1.4E-28 T 22-04-2016 VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 2.17E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.17E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 2.17E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.17E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 SMART SM00347 22 123 1.2E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 Gene3D G3DSA:1.10.10.10 8 134 9.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS03170 bce63f335d98b30c9dc574217d27c238 135 SUPERFAMILY SSF46785 11 133 3.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS09870 6cbc2da3bc3b80f3344d8646fbb2667c 666 PANTHER PTHR30288 423 666 5.0E-112 T 22-04-2016 VCLMA_RS09870 6cbc2da3bc3b80f3344d8646fbb2667c 666 PANTHER PTHR30288 1 388 5.0E-112 T 22-04-2016 VCLMA_RS09870 6cbc2da3bc3b80f3344d8646fbb2667c 666 PANTHER PTHR30288:SF0 423 666 5.0E-112 T 22-04-2016 VCLMA_RS09870 6cbc2da3bc3b80f3344d8646fbb2667c 666 PANTHER PTHR30288:SF0 1 388 5.0E-112 T 22-04-2016 VCLMA_RS09870 6cbc2da3bc3b80f3344d8646fbb2667c 666 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 430 655 1.9E-55 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 VCLMA_RS09870 6cbc2da3bc3b80f3344d8646fbb2667c 666 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 7.2E-21 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VCLMA_RS09870 6cbc2da3bc3b80f3344d8646fbb2667c 666 Pfam PF07196 Flagellin hook IN motif 125 178 1.3E-7 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VCLMA_RS07765 4fe56ab0fece72890ba8f969ddb823aa 428 SUPERFAMILY SSF161070 1 427 3.27E-109 T 22-04-2016 VCLMA_RS07765 4fe56ab0fece72890ba8f969ddb823aa 428 PANTHER PTHR11616:SF167 1 426 4.7E-159 T 22-04-2016 VCLMA_RS07765 4fe56ab0fece72890ba8f969ddb823aa 428 Pfam PF00209 Sodium:neurotransmitter symporter family 1 105 5.9E-15 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS07765 4fe56ab0fece72890ba8f969ddb823aa 428 Pfam PF00209 Sodium:neurotransmitter symporter family 128 427 2.7E-26 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS07765 4fe56ab0fece72890ba8f969ddb823aa 428 PANTHER PTHR11616 1 426 4.7E-159 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS00280 503cf147efd410ee495a650d438d83a5 183 Gene3D G3DSA:2.160.10.10 4 175 1.7E-43 T 22-04-2016 VCLMA_RS00280 503cf147efd410ee495a650d438d83a5 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 6.2E-7 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS00280 503cf147efd410ee495a650d438d83a5 183 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 40 9.8E-5 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS00280 503cf147efd410ee495a650d438d83a5 183 SUPERFAMILY SSF51161 4 175 8.04E-44 T 22-04-2016 IPR011004 Trimeric LpxA-like VCLMA_RS00280 503cf147efd410ee495a650d438d83a5 183 PANTHER PTHR13061 1 177 9.4E-72 T 22-04-2016 VCLMA_RS06515 fd79061e80867bf5186d922990e96dad 152 SUPERFAMILY SSF158682 1 147 4.32E-27 T 22-04-2016 IPR029024 TerB-like VCLMA_RS06515 fd79061e80867bf5186d922990e96dad 152 Gene3D G3DSA:1.10.3680.10 1 146 1.6E-24 T 22-04-2016 IPR029024 TerB-like VCLMA_RS06515 fd79061e80867bf5186d922990e96dad 152 Pfam PF05099 Tellurite resistance protein TerB 5 142 6.0E-38 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal VCLMA_RS00890 d39e870cc6b52aac8c2fe2c3d4aea7fb 312 SUPERFAMILY SSF161098 93 295 6.28E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS00890 d39e870cc6b52aac8c2fe2c3d4aea7fb 312 Gene3D G3DSA:1.10.3720.10 90 307 9.3E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS00890 d39e870cc6b52aac8c2fe2c3d4aea7fb 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 309 7.5E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS00890 d39e870cc6b52aac8c2fe2c3d4aea7fb 312 PANTHER PTHR30465:SF67 7 311 4.6E-224 T 22-04-2016 VCLMA_RS00890 d39e870cc6b52aac8c2fe2c3d4aea7fb 312 PANTHER PTHR30465 7 311 4.6E-224 T 22-04-2016 VCLMA_RS00890 d39e870cc6b52aac8c2fe2c3d4aea7fb 312 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 5.3E-10 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCLMA_RS10470 747927490c730701cc174f2f4c0b4bdc 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 VCLMA_RS10470 747927490c730701cc174f2f4c0b4bdc 280 PANTHER PTHR13773 1 280 1.6E-83 T 22-04-2016 VCLMA_RS10470 747927490c730701cc174f2f4c0b4bdc 280 PANTHER PTHR13773:SF0 1 280 1.6E-83 T 22-04-2016 VCLMA_RS10470 747927490c730701cc174f2f4c0b4bdc 280 Pfam PF01148 Cytidylyltransferase family 2 280 2.0E-73 T 22-04-2016 VCLMA_RS05610 3341d4cf14150a59b2a3b5e27864fc7c 132 SUPERFAMILY SSF52540 29 125 4.09E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05610 3341d4cf14150a59b2a3b5e27864fc7c 132 Gene3D G3DSA:3.40.50.300 27 125 5.1E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05480 3938d22f1aa9b31864ca4b9155f142c5 242 Gene3D G3DSA:3.40.50.150 19 241 2.7E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS05480 3938d22f1aa9b31864ca4b9155f142c5 242 PIRSF PIRSF006325 1 242 3.0E-128 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VCLMA_RS05480 3938d22f1aa9b31864ca4b9155f142c5 242 Pfam PF13649 Methyltransferase domain 60 158 5.9E-13 T 22-04-2016 VCLMA_RS05480 3938d22f1aa9b31864ca4b9155f142c5 242 PANTHER PTHR10108:SF809 1 241 1.3E-123 T 22-04-2016 VCLMA_RS05480 3938d22f1aa9b31864ca4b9155f142c5 242 PANTHER PTHR10108 1 241 1.3E-123 T 22-04-2016 VCLMA_RS05480 3938d22f1aa9b31864ca4b9155f142c5 242 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 3 242 42.95 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VCLMA_RS05480 3938d22f1aa9b31864ca4b9155f142c5 242 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.1E-118 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 VCLMA_RS05480 3938d22f1aa9b31864ca4b9155f142c5 242 SUPERFAMILY SSF53335 20 242 1.39E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 SUPERFAMILY SSF46785 1 85 1.21E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 SUPERFAMILY SSF53850 93 289 8.69E-26 T 22-04-2016 VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 Gene3D G3DSA:1.10.10.10 1 84 4.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.3E-24 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 Pfam PF03466 LysR substrate binding domain 88 287 5.8E-32 T 22-04-2016 IPR005119 LysR, substrate-binding VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 PANTHER PTHR30346 1 292 8.7E-118 T 22-04-2016 VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 Gene3D G3DSA:3.40.190.10 177 268 2.7E-21 T 22-04-2016 VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 Gene3D G3DSA:3.40.190.10 92 176 8.6E-14 T 22-04-2016 VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.1E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.1E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.1E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VCLMA_RS07360 2f7808785f1de79f27ff6be6b3923c90 292 PANTHER PTHR30346:SF6 1 292 8.7E-118 T 22-04-2016 VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 PANTHER PTHR30204:SF16 1 135 3.7E-76 T 22-04-2016 VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 Gene3D G3DSA:1.10.1660.10 1 55 4.2E-23 T 22-04-2016 VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 Gene3D G3DSA:1.10.1660.10 56 132 7.4E-26 T 22-04-2016 VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 Pfam PF00376 MerR family regulatory protein 2 39 4.2E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 1.2E-63 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 Pfam PF09278 MerR, DNA binding 45 107 7.3E-17 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 SMART SM00422 1 70 2.6E-26 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 PANTHER PTHR30204 1 135 3.7E-76 T 22-04-2016 VCLMA_RS04555 5a5fb008f406042545b3aeab09ff848c 139 SUPERFAMILY SSF46955 1 126 8.79E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain VCLMA_RS02880 7a1a840195c380971ed3af5647222989 293 Gene3D G3DSA:3.40.50.620 1 175 8.5E-80 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS02880 7a1a840195c380971ed3af5647222989 293 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 23 68 4.2E-10 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VCLMA_RS02880 7a1a840195c380971ed3af5647222989 293 Pfam PF02569 Pantoate-beta-alanine ligase 2 278 1.4E-100 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VCLMA_RS02880 7a1a840195c380971ed3af5647222989 293 PANTHER PTHR21299:SF1 1 293 5.9E-138 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VCLMA_RS02880 7a1a840195c380971ed3af5647222989 293 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.919 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VCLMA_RS02880 7a1a840195c380971ed3af5647222989 293 SUPERFAMILY SSF52374 1 281 9.38E-108 T 22-04-2016 VCLMA_RS02880 7a1a840195c380971ed3af5647222989 293 Gene3D G3DSA:3.30.1300.10 177 290 4.1E-27 T 22-04-2016 VCLMA_RS02880 7a1a840195c380971ed3af5647222989 293 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 281 6.2E-107 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 VCLMA_RS02880 7a1a840195c380971ed3af5647222989 293 PANTHER PTHR21299 1 293 5.9E-138 T 22-04-2016 VCLMA_RS08805 9b89d2c7c123ebd3a72f6f7cda037962 103 SMART SM00278 51 70 13.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS08805 9b89d2c7c123ebd3a72f6f7cda037962 103 SMART SM00278 81 100 4.6 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VCLMA_RS08805 9b89d2c7c123ebd3a72f6f7cda037962 103 Pfam PF12836 Helix-hairpin-helix motif 41 101 1.8E-22 T 22-04-2016 VCLMA_RS08805 9b89d2c7c123ebd3a72f6f7cda037962 103 PANTHER PTHR21180 20 101 2.2E-24 T 22-04-2016 VCLMA_RS08805 9b89d2c7c123ebd3a72f6f7cda037962 103 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 103 3.2E-26 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VCLMA_RS08805 9b89d2c7c123ebd3a72f6f7cda037962 103 SUPERFAMILY SSF47781 28 102 4.45E-28 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VCLMA_RS08805 9b89d2c7c123ebd3a72f6f7cda037962 103 Gene3D G3DSA:1.10.150.280 33 103 5.3E-20 T 22-04-2016 VCLMA_RS09685 10994fd17a146499e275ba1303bb5128 229 PANTHER PTHR30249:SF4 1 229 1.5E-140 T 22-04-2016 VCLMA_RS09685 10994fd17a146499e275ba1303bb5128 229 Pfam PF04172 LrgB-like family 14 224 2.7E-71 T 22-04-2016 IPR007300 CidB/LrgB family VCLMA_RS09685 10994fd17a146499e275ba1303bb5128 229 PANTHER PTHR30249 1 229 1.5E-140 T 22-04-2016 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 PANTHER PTHR21109 1 71 1.3E-26 T 22-04-2016 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS02505 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 3.6E-23 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS07930 93a8599b9901c19d9de98b1c0020898f 98 SUPERFAMILY SSF54909 1 98 4.56E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel VCLMA_RS07930 93a8599b9901c19d9de98b1c0020898f 98 Gene3D G3DSA:3.30.70.1060 1 98 2.9E-38 T 22-04-2016 VCLMA_RS07930 93a8599b9901c19d9de98b1c0020898f 98 Pfam PF03795 YCII-related domain 1 95 4.5E-31 T 22-04-2016 IPR005545 YCII-related VCLMA_RS07930 93a8599b9901c19d9de98b1c0020898f 98 PANTHER PTHR33606 1 98 5.0E-34 T 22-04-2016 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 PANTHER PTHR11117 1 287 1.8E-198 T 22-04-2016 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 SMART SM00881 4 100 3.0E-36 T 22-04-2016 IPR003781 CoA-binding GO:0048037 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 Pfam PF00549 CoA-ligase 151 270 2.8E-21 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 Gene3D G3DSA:3.40.50.261 119 287 2.5E-78 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.4E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.4E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.4E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.4E-40 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 287 1.8E-145 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 SUPERFAMILY SSF52210 123 286 1.14E-56 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 Pfam PF02629 CoA binding domain 6 99 2.3E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 PIRSF PIRSF001553 1 289 3.1E-134 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 Gene3D G3DSA:3.40.50.720 2 118 2.3E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 VCLMA_RS09605 34aa025251a1814f6e3bdb72e7354ea6 290 SUPERFAMILY SSF51735 1 122 2.89E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS07810 ae1a55c284ff3c9359fc9f362b1b5744 129 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 129 3.2E-49 T 22-04-2016 IPR014320 Phage shock protein, PspC VCLMA_RS07810 ae1a55c284ff3c9359fc9f362b1b5744 129 Pfam PF04024 PspC domain 4 61 3.0E-16 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal VCLMA_RS07810 ae1a55c284ff3c9359fc9f362b1b5744 129 PANTHER PTHR33885 1 127 7.3E-32 T 22-04-2016 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.5E-71 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Gene3D G3DSA:3.30.360.10 159 314 3.8E-87 T 22-04-2016 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.3E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.3E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.3E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.3E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 2.3E-46 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 SUPERFAMILY SSF51735 3 166 5.46E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PANTHER PTHR10836 1 331 1.8E-247 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 SMART SM00846 3 150 1.3E-97 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Gene3D G3DSA:3.40.50.720 1 158 3.3E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 PIRSF PIRSF000149 1 331 5.5E-137 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 SUPERFAMILY SSF55347 149 312 9.67E-81 T 22-04-2016 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 7.2E-138 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 9.9E-62 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS09190 d89f4d9c79ee3b2ec8995edea6c7fcdd 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 VCLMA_RS05055 fd90f45055e2d40a329e07e03da4237f 262 SMART SM00342 172 253 4.4E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS05055 fd90f45055e2d40a329e07e03da4237f 262 SUPERFAMILY SSF46689 207 255 9.41E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS05055 fd90f45055e2d40a329e07e03da4237f 262 PANTHER PTHR11019:SF46 100 261 2.4E-21 T 22-04-2016 VCLMA_RS05055 fd90f45055e2d40a329e07e03da4237f 262 Pfam PF12833 Helix-turn-helix domain 179 254 6.4E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VCLMA_RS05055 fd90f45055e2d40a329e07e03da4237f 262 PANTHER PTHR11019 100 261 2.4E-21 T 22-04-2016 VCLMA_RS05055 fd90f45055e2d40a329e07e03da4237f 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VCLMA_RS05055 fd90f45055e2d40a329e07e03da4237f 262 Gene3D G3DSA:1.10.10.60 207 252 7.0E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS07105 301a8c5718ef9121dc9da02a723fe9a6 245 PANTHER PTHR21392 1 233 1.1E-121 T 22-04-2016 VCLMA_RS07105 301a8c5718ef9121dc9da02a723fe9a6 245 SMART SM01144 27 221 5.2E-61 T 22-04-2016 IPR005636 DTW VCLMA_RS07105 301a8c5718ef9121dc9da02a723fe9a6 245 PANTHER PTHR21392:SF1 1 233 1.1E-121 T 22-04-2016 VCLMA_RS07105 301a8c5718ef9121dc9da02a723fe9a6 245 Pfam PF03942 DTW domain 29 215 7.6E-40 T 22-04-2016 IPR005636 DTW VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 Gene3D G3DSA:3.40.50.720 182 356 6.4E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 PIRSF PIRSF000445 1 419 6.5E-158 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 PANTHER PTHR21089:SF3 270 357 1.2E-149 T 22-04-2016 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 PANTHER PTHR21089:SF3 45 254 1.2E-149 T 22-04-2016 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 4.7E-50 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.819 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 SUPERFAMILY SSF51735 161 313 2.89E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 SUPERFAMILY SSF69075 315 416 3.53E-27 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 PANTHER PTHR21089 270 357 1.2E-149 T 22-04-2016 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 PANTHER PTHR21089 45 254 1.2E-149 T 22-04-2016 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 SUPERFAMILY SSF69742 1 156 5.89E-49 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 413 2.1E-22 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 2.0E-52 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS10035 e39f684d665e0f4cbd8b159ca32a85db 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 5.1E-146 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 VCLMA_RS07310 21a8999ad764485bb8afe8649ed776ad 273 PANTHER PTHR30606:SF2 1 273 2.4E-78 T 22-04-2016 VCLMA_RS07310 21a8999ad764485bb8afe8649ed776ad 273 PANTHER PTHR30606 1 273 2.4E-78 T 22-04-2016 VCLMA_RS07310 21a8999ad764485bb8afe8649ed776ad 273 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 273 1.4E-21 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VCLMA_RS07305 da4bc682e1013b5cade1183a9d2073f3 105 Pfam PF04266 ASCH domain 8 93 5.1E-14 T 22-04-2016 IPR007374 ASCH domain VCLMA_RS07305 da4bc682e1013b5cade1183a9d2073f3 105 PIRSF PIRSF029143 2 105 2.6E-43 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 VCLMA_RS07305 da4bc682e1013b5cade1183a9d2073f3 105 PANTHER PTHR38088 3 105 1.9E-88 T 22-04-2016 VCLMA_RS07305 da4bc682e1013b5cade1183a9d2073f3 105 SUPERFAMILY SSF88697 4 103 8.45E-32 T 22-04-2016 IPR015947 PUA-like domain VCLMA_RS07305 da4bc682e1013b5cade1183a9d2073f3 105 Gene3D G3DSA:2.30.130.30 4 103 8.4E-42 T 22-04-2016 VCLMA_RS07305 da4bc682e1013b5cade1183a9d2073f3 105 PANTHER PTHR38088:SF1 3 105 1.9E-88 T 22-04-2016 VCLMA_RS07305 da4bc682e1013b5cade1183a9d2073f3 105 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 3 104 30.342 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 VCLMA_RS07305 da4bc682e1013b5cade1183a9d2073f3 105 SMART SM01022 7 105 2.2E-24 T 22-04-2016 IPR007374 ASCH domain VCLMA_RS04015 c249f65948e84ec6bb8fe65dce57d10d 149 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 15 38 8.9E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS04015 c249f65948e84ec6bb8fe65dce57d10d 149 SUPERFAMILY SSF54523 19 132 7.85E-19 T 22-04-2016 VCLMA_RS04015 c249f65948e84ec6bb8fe65dce57d10d 149 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 40 127 4.7E-14 T 22-04-2016 IPR031982 Type IV minor pilin ComP VCLMA_RS04015 c249f65948e84ec6bb8fe65dce57d10d 149 Gene3D G3DSA:3.30.700.10 20 123 2.4E-16 T 22-04-2016 VCLMA_RS04015 c249f65948e84ec6bb8fe65dce57d10d 149 PANTHER PTHR30093 1 80 3.5E-19 T 22-04-2016 VCLMA_RS04015 c249f65948e84ec6bb8fe65dce57d10d 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 39 4.7E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS04015 c249f65948e84ec6bb8fe65dce57d10d 149 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 17 37 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 PANTHER PTHR33280 1 66 2.3E-35 T 22-04-2016 VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 5.8E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 5.8E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.8E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 Pfam PF01197 Ribosomal protein L31 1 66 8.9E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 PANTHER PTHR33280:SF2 1 66 2.3E-35 T 22-04-2016 VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 SUPERFAMILY SSF143800 1 68 6.67E-27 T 22-04-2016 VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 32.084 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 1.0E-34 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12475 23dde0826d529b23639792bf2ebd68bb 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 73.813 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 SUPERFAMILY SSF48557 5 455 2.36E-137 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 Gene3D G3DSA:1.10.40.30 414 460 5.4E-20 T 22-04-2016 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 PANTHER PTHR11444:SF22 1 454 0.0 T 22-04-2016 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.3E-6 T 22-04-2016 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.3E-6 T 22-04-2016 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.3E-6 T 22-04-2016 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 PANTHER PTHR11444 1 454 0.0 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 Gene3D G3DSA:1.10.275.10 4 133 2.7E-52 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 Pfam PF00206 Lyase 13 337 1.2E-95 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 Pfam PF10415 Fumarase C C-terminus 403 455 3.2E-18 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 Gene3D G3DSA:1.20.200.10 134 413 3.2E-87 T 22-04-2016 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.4E-31 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.4E-31 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.4E-31 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS07290 54c0c03d4004501daed3c6ce45c0b3ae 461 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.4E-31 T 22-04-2016 IPR000362 Fumarate lyase family VCLMA_RS07800 393d45980e92d15929a46192d039703e 359 Pfam PF13533 Biotin-lipoyl like 61 103 4.4E-12 T 22-04-2016 VCLMA_RS07800 393d45980e92d15929a46192d039703e 359 PANTHER PTHR30469 1 359 1.5E-154 T 22-04-2016 VCLMA_RS07800 393d45980e92d15929a46192d039703e 359 Pfam PF13437 HlyD family secretion protein 154 251 1.6E-9 T 22-04-2016 VCLMA_RS07800 393d45980e92d15929a46192d039703e 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 352 9.4E-70 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 VCLMA_RS07800 393d45980e92d15929a46192d039703e 359 PANTHER PTHR30469:SF10 1 359 1.5E-154 T 22-04-2016 VCLMA_RS07800 393d45980e92d15929a46192d039703e 359 SUPERFAMILY SSF111369 49 262 2.88E-30 T 22-04-2016 VCLMA_RS07800 393d45980e92d15929a46192d039703e 359 Gene3D G3DSA:2.40.50.100 151 182 6.8E-18 T 22-04-2016 VCLMA_RS07800 393d45980e92d15929a46192d039703e 359 Gene3D G3DSA:2.40.50.100 60 90 6.8E-18 T 22-04-2016 VCLMA_RS06245 7048e64a0a66ba805a6edb2489b491c0 65 PANTHER PTHR40691 1 65 1.1E-29 T 22-04-2016 VCLMA_RS06245 7048e64a0a66ba805a6edb2489b491c0 65 Pfam PF04400 Protein of unknown function (DUF539) 21 62 2.9E-22 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM VCLMA_RS08485 0a8f4a0b45e83bd173159177650d635a 246 PANTHER PTHR34990 1 230 3.5E-122 T 22-04-2016 VCLMA_RS08485 0a8f4a0b45e83bd173159177650d635a 246 PANTHER PTHR34990:SF1 1 230 3.5E-122 T 22-04-2016 VCLMA_RS08485 0a8f4a0b45e83bd173159177650d635a 246 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 230 1.1E-116 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VCLMA_RS08485 0a8f4a0b45e83bd173159177650d635a 246 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 1.4E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 VCLMA_RS08485 0a8f4a0b45e83bd173159177650d635a 246 SUPERFAMILY SSF56300 151 221 4.43E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS08485 0a8f4a0b45e83bd173159177650d635a 246 SUPERFAMILY SSF56300 1 123 4.43E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS08485 0a8f4a0b45e83bd173159177650d635a 246 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 117.784 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 VCLMA_RS08485 0a8f4a0b45e83bd173159177650d635a 246 Gene3D G3DSA:3.60.21.10 173 204 3.3E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS08485 0a8f4a0b45e83bd173159177650d635a 246 Gene3D G3DSA:3.60.21.10 1 125 3.3E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like VCLMA_RS09040 90ec205b9b3bdff7e5fd91184e7b20b3 181 PANTHER PTHR10245:SF9 1 181 2.6E-63 T 22-04-2016 VCLMA_RS09040 90ec205b9b3bdff7e5fd91184e7b20b3 181 Gene3D G3DSA:2.60.120.10 87 179 1.6E-32 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS09040 90ec205b9b3bdff7e5fd91184e7b20b3 181 SMART SM00530 13 68 2.8E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VCLMA_RS09040 90ec205b9b3bdff7e5fd91184e7b20b3 181 Pfam PF01381 Helix-turn-helix 14 64 1.0E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VCLMA_RS09040 90ec205b9b3bdff7e5fd91184e7b20b3 181 Gene3D G3DSA:1.10.260.40 5 75 6.1E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS09040 90ec205b9b3bdff7e5fd91184e7b20b3 181 SUPERFAMILY SSF47413 5 72 1.02E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 VCLMA_RS09040 90ec205b9b3bdff7e5fd91184e7b20b3 181 Pfam PF07883 Cupin domain 125 170 6.1E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel VCLMA_RS09040 90ec205b9b3bdff7e5fd91184e7b20b3 181 PANTHER PTHR10245 1 181 2.6E-63 T 22-04-2016 VCLMA_RS09040 90ec205b9b3bdff7e5fd91184e7b20b3 181 SUPERFAMILY SSF51182 53 178 9.26E-19 T 22-04-2016 IPR011051 RmlC-like cupin domain VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 Gene3D G3DSA:2.160.10.10 322 451 1.6E-34 T 22-04-2016 VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 Gene3D G3DSA:3.90.550.10 1 242 3.1E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 PANTHER PTHR22572:SF115 4 446 1.2E-229 T 22-04-2016 VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 2.9E-209 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 PANTHER PTHR22572 4 446 1.2E-229 T 22-04-2016 VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 SUPERFAMILY SSF53448 1 249 3.96E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.8 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 Gene3D G3DSA:2.160.10.10 243 321 3.1E-20 T 22-04-2016 VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 SUPERFAMILY SSF51161 252 434 2.02E-52 T 22-04-2016 IPR011004 Trimeric LpxA-like VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 347 4.9E-5 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 295 4.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 2.7E-9 T 22-04-2016 IPR001451 Hexapeptide repeat VCLMA_RS12935 f60455b419111d5e4a8e0c01bfbb483b 453 Pfam PF12804 MobA-like NTP transferase domain 6 126 7.6E-22 T 22-04-2016 IPR025877 MobA-like NTP transferase VCLMA_RS00885 0a1d351308d19ab3706395e3438b29b6 325 Gene3D G3DSA:1.10.3720.10 88 312 1.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS00885 0a1d351308d19ab3706395e3438b29b6 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 6.9E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS00885 0a1d351308d19ab3706395e3438b29b6 325 PANTHER PTHR30465 1 320 1.8E-220 T 22-04-2016 VCLMA_RS00885 0a1d351308d19ab3706395e3438b29b6 325 PANTHER PTHR30465:SF47 1 320 1.8E-220 T 22-04-2016 VCLMA_RS00885 0a1d351308d19ab3706395e3438b29b6 325 SUPERFAMILY SSF161098 90 302 1.05E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 707 31.45 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 PANTHER PTHR18895:SF62 406 683 5.1E-129 T 22-04-2016 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 435 663 2.3E-26 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 PIRSF PIRSF037618 1 708 2.1E-297 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 Gene3D G3DSA:3.40.50.150 255 334 7.9E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 Gene3D G3DSA:3.40.50.150 148 214 7.9E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 SMART SM00981 56 154 7.6E-14 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 2.0E-60 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 SUPERFAMILY SSF53335 258 371 2.05E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 SUPERFAMILY SSF53335 139 217 2.05E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 PANTHER PTHR18895 406 683 5.1E-129 T 22-04-2016 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 Pfam PF02926 THUMP domain 31 153 1.6E-7 T 22-04-2016 IPR004114 THUMP domain GO:0003723 VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 SUPERFAMILY SSF53335 400 706 1.36E-69 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS06900 f57fcdbcac836342049d34d8a01b34e8 708 Gene3D G3DSA:3.40.50.150 437 706 9.7E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS10235 64a3027904c288d609c4242c13d28fa9 141 Gene3D G3DSA:1.20.58.300 1 113 2.6E-24 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VCLMA_RS10235 64a3027904c288d609c4242c13d28fa9 141 SUPERFAMILY SSF140566 1 113 3.66E-22 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VCLMA_RS10235 64a3027904c288d609c4242c13d28fa9 141 Pfam PF05130 FlgN protein 2 131 1.4E-26 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VCLMA_RS10185 b52daad429c6428bf861308eec9400b0 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 8.4E-24 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCLMA_RS10185 b52daad429c6428bf861308eec9400b0 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 6.8E-40 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VCLMA_RS10185 b52daad429c6428bf861308eec9400b0 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 3.0E-30 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VCLMA_RS10185 b52daad429c6428bf861308eec9400b0 262 PANTHER PTHR30435:SF19 1 262 1.3E-138 T 22-04-2016 VCLMA_RS10185 b52daad429c6428bf861308eec9400b0 262 PANTHER PTHR30435 1 262 1.3E-138 T 22-04-2016 VCLMA_RS10185 b52daad429c6428bf861308eec9400b0 262 Pfam PF00460 Flagella basal body rod protein 5 35 6.8E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VCLMA_RS10185 b52daad429c6428bf861308eec9400b0 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site VCLMA_RS10185 b52daad429c6428bf861308eec9400b0 262 SUPERFAMILY SSF117143 92 223 3.53E-36 T 22-04-2016 VCLMA_RS10185 b52daad429c6428bf861308eec9400b0 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 1.2E-116 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VCLMA_RS01660 358e7ee4651b4aedfce36230aae92104 471 PANTHER PTHR10283:SF92 1 471 9.5E-145 T 22-04-2016 VCLMA_RS01660 358e7ee4651b4aedfce36230aae92104 471 PANTHER PTHR10283 1 471 9.5E-145 T 22-04-2016 VCLMA_RS01660 358e7ee4651b4aedfce36230aae92104 471 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 468 6.8E-81 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS01660 358e7ee4651b4aedfce36230aae92104 471 Pfam PF00939 Sodium:sulfate symporter transmembrane region 10 467 1.7E-48 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS10250 1a3b20c43b0b9c5c52b950932d44f5fc 377 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 2.1E-24 T 22-04-2016 IPR032370 Flagellar assembly protein T, N-terminal VCLMA_RS10250 1a3b20c43b0b9c5c52b950932d44f5fc 377 Pfam PF16539 Flagellar assembly protein T, middle domain 114 256 2.3E-42 T 22-04-2016 IPR032386 Flagellar assembly protein T, middle domain VCLMA_RS10250 1a3b20c43b0b9c5c52b950932d44f5fc 377 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 300 375 1.4E-26 T 22-04-2016 IPR032388 Flagellar assembly protein T, C-terminal VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 6.5E-42 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 6.5E-42 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 6.5E-42 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.25 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 PIRSF PIRSF002191 1 117 6.6E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.2E-52 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 PANTHER PTHR15680 1 117 4.9E-60 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 Pfam PF01245 Ribosomal protein L19 3 113 1.7E-51 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 SUPERFAMILY SSF50104 2 115 1.0E-48 T 22-04-2016 IPR008991 Translation protein SH3-like domain VCLMA_RS02760 b4d742ab9f943c6484c38abbdf0f05f1 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS10785 9bceccaf1387549ffdb69dd297aef268 102 Gene3D G3DSA:1.10.10.710 20 87 1.8E-24 T 22-04-2016 IPR009813 Uncharacterised protein family YebG VCLMA_RS10785 9bceccaf1387549ffdb69dd297aef268 102 Pfam PF07130 YebG protein 1 72 2.0E-31 T 22-04-2016 IPR009813 Uncharacterised protein family YebG VCLMA_RS07075 0b6b531a747e1a8d599d47d46451facc 240 PANTHER PTHR24220:SF542 6 228 3.6E-155 T 22-04-2016 VCLMA_RS07075 0b6b531a747e1a8d599d47d46451facc 240 Gene3D G3DSA:3.40.50.300 3 226 8.2E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS07075 0b6b531a747e1a8d599d47d46451facc 240 Pfam PF00005 ABC transporter 27 164 4.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS07075 0b6b531a747e1a8d599d47d46451facc 240 SMART SM00382 29 201 3.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS07075 0b6b531a747e1a8d599d47d46451facc 240 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS07075 0b6b531a747e1a8d599d47d46451facc 240 PANTHER PTHR24220 6 228 3.6E-155 T 22-04-2016 VCLMA_RS07075 0b6b531a747e1a8d599d47d46451facc 240 SUPERFAMILY SSF52540 5 216 3.15E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 PANTHER PTHR30012:SF6 2 405 3.2E-278 T 22-04-2016 VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 PANTHER PTHR30012 2 405 3.2E-278 T 22-04-2016 VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 1.9E-34 T 22-04-2016 IPR018076 Type II secretion system F domain VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 4.5E-25 T 22-04-2016 IPR018076 Type II secretion system F domain VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 403 6.7E-160 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.16E-38 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.16E-38 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.16E-38 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS12725 92c3b04b5aed5e463dd732c1eed092d1 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.16E-38 T 22-04-2016 IPR003004 GspF/PilC family VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 PANTHER PTHR11958:SF5 22 456 1.1E-251 T 22-04-2016 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.9E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.9E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.9E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 PRINTS PR00173 Glutamate-aspartate symporter signature 181 203 1.9E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 PRINTS PR00173 Glutamate-aspartate symporter signature 259 278 1.9E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.9E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.9E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 Pfam PF00375 Sodium:dicarboxylate symporter family 30 441 1.6E-99 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 PANTHER PTHR11958 22 456 1.1E-251 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 Gene3D G3DSA:1.10.3860.10 24 448 3.5E-95 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS05830 ed5e2d55e7969e9dd714c22244c6592f 457 SUPERFAMILY SSF118215 29 441 4.71E-92 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS00035 3b0eb75b7a492dd002f8063a89b91aed 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 44 8.1E-26 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS00035 3b0eb75b7a492dd002f8063a89b91aed 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 43 2.0E-15 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS00035 3b0eb75b7a492dd002f8063a89b91aed 45 Pfam PF00468 Ribosomal protein L34 3 44 2.4E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS00035 3b0eb75b7a492dd002f8063a89b91aed 45 PANTHER PTHR14503 1 44 5.3E-22 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS00035 3b0eb75b7a492dd002f8063a89b91aed 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.462 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS00035 3b0eb75b7a492dd002f8063a89b91aed 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS07245 3c5471545023723901932a0c813da5b4 374 PANTHER PTHR11935 31 65 4.5E-21 T 22-04-2016 VCLMA_RS07245 3c5471545023723901932a0c813da5b4 374 PANTHER PTHR11935 85 317 4.5E-21 T 22-04-2016 VCLMA_RS07245 3c5471545023723901932a0c813da5b4 374 SUPERFAMILY SSF56281 72 310 1.49E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS07245 3c5471545023723901932a0c813da5b4 374 Pfam PF00753 Metallo-beta-lactamase superfamily 92 271 1.2E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS07245 3c5471545023723901932a0c813da5b4 374 Gene3D G3DSA:3.60.15.10 76 310 3.3E-40 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS07245 3c5471545023723901932a0c813da5b4 374 SMART SM00849 91 285 6.9E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS07320 cf8db5dac8d66b1fe38ff6aa508746e4 556 Gene3D G3DSA:2.30.38.10 366 436 4.9E-14 T 22-04-2016 VCLMA_RS07320 cf8db5dac8d66b1fe38ff6aa508746e4 556 SUPERFAMILY SSF56801 16 550 2.22E-103 T 22-04-2016 VCLMA_RS07320 cf8db5dac8d66b1fe38ff6aa508746e4 556 Pfam PF00501 AMP-binding enzyme 41 453 5.4E-65 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS07320 cf8db5dac8d66b1fe38ff6aa508746e4 556 Gene3D G3DSA:3.40.50.980 205 365 1.4E-36 T 22-04-2016 VCLMA_RS07320 cf8db5dac8d66b1fe38ff6aa508746e4 556 ProSitePatterns PS00455 Putative AMP-binding domain signature. 199 210 - T 22-04-2016 IPR020845 AMP-binding, conserved site VCLMA_RS07320 cf8db5dac8d66b1fe38ff6aa508746e4 556 Gene3D G3DSA:3.40.50.980 39 204 1.3E-18 T 22-04-2016 VCLMA_RS07320 cf8db5dac8d66b1fe38ff6aa508746e4 556 Gene3D G3DSA:3.30.300.30 448 551 3.0E-19 T 22-04-2016 VCLMA_RS07320 cf8db5dac8d66b1fe38ff6aa508746e4 556 PANTHER PTHR24095 192 537 7.1E-138 T 22-04-2016 VCLMA_RS07320 cf8db5dac8d66b1fe38ff6aa508746e4 556 PANTHER PTHR24095 3 171 7.1E-138 T 22-04-2016 VCLMA_RS02965 c206fea378e75ff752b77106310d93cf 343 PANTHER PTHR24220 6 289 1.2E-131 T 22-04-2016 VCLMA_RS02965 c206fea378e75ff752b77106310d93cf 343 Pfam PF00005 ABC transporter 20 164 9.6E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS02965 c206fea378e75ff752b77106310d93cf 343 Pfam PF08402 TOBE domain 276 342 8.9E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 VCLMA_RS02965 c206fea378e75ff752b77106310d93cf 343 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VCLMA_RS02965 c206fea378e75ff752b77106310d93cf 343 PANTHER PTHR24220:SF282 6 289 1.2E-131 T 22-04-2016 VCLMA_RS02965 c206fea378e75ff752b77106310d93cf 343 SMART SM00382 29 214 3.9E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS02965 c206fea378e75ff752b77106310d93cf 343 SUPERFAMILY SSF52540 5 242 1.25E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02965 c206fea378e75ff752b77106310d93cf 343 SUPERFAMILY SSF50331 264 342 5.95E-8 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal VCLMA_RS02965 c206fea378e75ff752b77106310d93cf 343 Gene3D G3DSA:3.40.50.300 4 235 9.4E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02475 97b42af6e34606f076882a1cdcadb06a 586 PANTHER PTHR37323:SF1 1 586 1.6E-144 T 22-04-2016 VCLMA_RS02475 97b42af6e34606f076882a1cdcadb06a 586 SUPERFAMILY SSF69593 61 249 3.53E-6 T 22-04-2016 VCLMA_RS02475 97b42af6e34606f076882a1cdcadb06a 586 SUPERFAMILY SSF55729 312 452 2.12E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS02475 97b42af6e34606f076882a1cdcadb06a 586 PANTHER PTHR37323 1 586 1.6E-144 T 22-04-2016 VCLMA_RS02475 97b42af6e34606f076882a1cdcadb06a 586 SMART SM00563 75 199 5.8E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 VCLMA_RS02475 97b42af6e34606f076882a1cdcadb06a 586 Pfam PF13444 Acetyltransferase (GNAT) domain 329 430 5.5E-22 T 22-04-2016 VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 SUPERFAMILY SSF51246 317 389 1.88E-18 T 22-04-2016 IPR011054 Rudiment single hybrid motif VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 Gene3D G3DSA:3.40.50.20 3 118 9.3E-40 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 SUPERFAMILY SSF52440 2 110 1.31E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 Gene3D G3DSA:3.30.1490.20 121 196 5.3E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 PANTHER PTHR11609 1 381 1.6E-227 T 22-04-2016 VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 390 2.9E-198 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 Pfam PF02222 ATP-grasp domain 121 293 9.9E-58 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 PANTHER PTHR11609:SF7 1 381 1.6E-227 T 22-04-2016 VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 6 390 52.135 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 Gene3D G3DSA:3.30.470.20 197 387 8.5E-71 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 VCLMA_RS05800 27310b1116ef65d521bf35884ddbfeee 391 SUPERFAMILY SSF56059 111 313 1.4E-58 T 22-04-2016 VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 PANTHER PTHR30487 1 35 2.1E-118 T 22-04-2016 VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 PANTHER PTHR30487 57 283 2.1E-118 T 22-04-2016 VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 17 124 1.9E-33 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 2.6E-29 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 2.6E-29 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 143 160 2.6E-29 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 2.6E-29 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 PANTHER PTHR30487:SF0 1 35 2.1E-118 T 22-04-2016 VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 PANTHER PTHR30487:SF0 57 283 2.1E-118 T 22-04-2016 VCLMA_RS11230 8039c68ffa5b72b0c859de33f679a521 291 Pfam PF01478 Type IV leader peptidase family 135 244 2.2E-26 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VCLMA_RS01900 18fb81d4e5ed0875983ba5faadacfd79 70 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 2 64 1.2E-20 T 22-04-2016 IPR014318 Phage shock protein, PspG VCLMA_RS01900 18fb81d4e5ed0875983ba5faadacfd79 70 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 4 64 1.4E-19 T 22-04-2016 IPR014318 Phage shock protein, PspG VCLMA_RS04895 50f6bd6061a9b2eb876d44ef1c2ef3d6 132 Gene3D G3DSA:2.40.160.60 25 132 1.1E-31 T 22-04-2016 VCLMA_RS04895 50f6bd6061a9b2eb876d44ef1c2ef3d6 132 PANTHER PTHR35093 3 132 5.4E-80 T 22-04-2016 VCLMA_RS04895 50f6bd6061a9b2eb876d44ef1c2ef3d6 132 PANTHER PTHR35093:SF1 3 132 5.4E-80 T 22-04-2016 VCLMA_RS04895 50f6bd6061a9b2eb876d44ef1c2ef3d6 132 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 132 1.8E-36 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VCLMA_RS04895 50f6bd6061a9b2eb876d44ef1c2ef3d6 132 SUPERFAMILY SSF56935 26 132 8.79E-27 T 22-04-2016 VCLMA_RS12510 bf2ca35d0ff88bd0bd2c9ad4334aec3e 335 SUPERFAMILY SSF56655 1 324 1.1E-107 T 22-04-2016 VCLMA_RS12510 bf2ca35d0ff88bd0bd2c9ad4334aec3e 335 PANTHER PTHR30447 1 335 8.5E-183 T 22-04-2016 VCLMA_RS12510 bf2ca35d0ff88bd0bd2c9ad4334aec3e 335 PANTHER PTHR30447:SF0 1 335 8.5E-183 T 22-04-2016 VCLMA_RS12510 bf2ca35d0ff88bd0bd2c9ad4334aec3e 335 PIRSF PIRSF004532 1 331 1.4E-135 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VCLMA_RS12510 bf2ca35d0ff88bd0bd2c9ad4334aec3e 335 Gene3D G3DSA:3.30.540.10 1 170 3.5E-65 T 22-04-2016 VCLMA_RS12510 bf2ca35d0ff88bd0bd2c9ad4334aec3e 335 Gene3D G3DSA:3.30.540.10 171 329 1.5E-47 T 22-04-2016 VCLMA_RS12510 bf2ca35d0ff88bd0bd2c9ad4334aec3e 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 5.1E-130 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VCLMA_RS12510 bf2ca35d0ff88bd0bd2c9ad4334aec3e 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 6.3E-170 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VCLMA_RS01045 4830c6270538cec1a64898cc8c0a045c 224 PANTHER PTHR30471:SF5 1 224 4.1E-149 T 22-04-2016 VCLMA_RS01045 4830c6270538cec1a64898cc8c0a045c 224 Gene3D G3DSA:1.10.150.20 47 78 9.3E-4 T 22-04-2016 VCLMA_RS01045 4830c6270538cec1a64898cc8c0a045c 224 SUPERFAMILY SSF47781 17 91 3.16E-11 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 VCLMA_RS01045 4830c6270538cec1a64898cc8c0a045c 224 Pfam PF04002 RadC-like JAB domain 104 222 3.0E-45 T 22-04-2016 IPR025657 RadC-like JAB domain VCLMA_RS01045 4830c6270538cec1a64898cc8c0a045c 224 Gene3D G3DSA:3.40.140.10 101 224 3.0E-51 T 22-04-2016 VCLMA_RS01045 4830c6270538cec1a64898cc8c0a045c 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 4.4E-77 T 22-04-2016 IPR001405 RadC protein VCLMA_RS01045 4830c6270538cec1a64898cc8c0a045c 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site VCLMA_RS01045 4830c6270538cec1a64898cc8c0a045c 224 PANTHER PTHR30471 1 224 4.1E-149 T 22-04-2016 VCLMA_RS01045 4830c6270538cec1a64898cc8c0a045c 224 SUPERFAMILY SSF102712 133 190 4.05E-5 T 22-04-2016 VCLMA_RS02225 971900c3da0f42c65c7655d06038eabc 126 PANTHER PTHR14289 6 122 6.0E-54 T 22-04-2016 VCLMA_RS02225 971900c3da0f42c65c7655d06038eabc 126 Gene3D G3DSA:2.60.40.1470 7 125 5.5E-46 T 22-04-2016 IPR007474 ApaG domain VCLMA_RS02225 971900c3da0f42c65c7655d06038eabc 126 Pfam PF04379 Protein of unknown function (DUF525) 18 103 6.4E-33 T 22-04-2016 IPR007474 ApaG domain VCLMA_RS02225 971900c3da0f42c65c7655d06038eabc 126 SUPERFAMILY SSF110069 7 126 1.26E-47 T 22-04-2016 IPR007474 ApaG domain VCLMA_RS02225 971900c3da0f42c65c7655d06038eabc 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 32.674 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG VCLMA_RS09015 5ae4a4959e01b9c8d01d4c7070c709ec 291 PANTHER PTHR41542 1 291 2.1E-102 T 22-04-2016 VCLMA_RS09015 5ae4a4959e01b9c8d01d4c7070c709ec 291 SUPERFAMILY SSF54427 170 290 2.89E-16 T 22-04-2016 IPR032710 NTF2-like domain VCLMA_RS09015 5ae4a4959e01b9c8d01d4c7070c709ec 291 PANTHER PTHR41542:SF1 1 291 2.1E-102 T 22-04-2016 VCLMA_RS09015 5ae4a4959e01b9c8d01d4c7070c709ec 291 Pfam PF07466 Protein of unknown function (DUF1517) 28 128 1.4E-5 T 22-04-2016 IPR010903 Protein of unknown function DUF1517 VCLMA_RS09015 5ae4a4959e01b9c8d01d4c7070c709ec 291 Pfam PF04280 Tim44-like domain 169 290 2.6E-14 T 22-04-2016 IPR007379 Tim44-like domain VCLMA_RS09015 5ae4a4959e01b9c8d01d4c7070c709ec 291 SMART SM00978 160 291 6.0E-34 T 22-04-2016 IPR007379 Tim44-like domain VCLMA_RS08520 ada1ae72fd3d8f64b4bb4830453c0870 182 Pfam PF07445 Primosomal replication protein priC 6 179 1.3E-50 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC VCLMA_RS11935 6d770dcf332b5fd6c2d076247135fae2 149 Pfam PF13673 Acetyltransferase (GNAT) domain 45 148 2.5E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS11935 6d770dcf332b5fd6c2d076247135fae2 149 PANTHER PTHR23091 9 148 2.1E-52 T 22-04-2016 VCLMA_RS11935 6d770dcf332b5fd6c2d076247135fae2 149 PANTHER PTHR23091:SF275 9 148 2.1E-52 T 22-04-2016 VCLMA_RS11935 6d770dcf332b5fd6c2d076247135fae2 149 SUPERFAMILY SSF55729 1 148 7.32E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS11935 6d770dcf332b5fd6c2d076247135fae2 149 Gene3D G3DSA:3.40.630.30 2 148 9.6E-52 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS10300 bf07f75c3a6bba6109c24b593625db08 288 PANTHER PTHR40590 1 287 1.8E-118 T 22-04-2016 VCLMA_RS10300 bf07f75c3a6bba6109c24b593625db08 288 Pfam PF01963 TraB family 23 276 3.2E-53 T 22-04-2016 IPR002816 Pheromone shutdown, TraB VCLMA_RS10055 dca53cd2289939e02937410b6a91e1a2 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VCLMA_RS10055 dca53cd2289939e02937410b6a91e1a2 196 Gene3D G3DSA:3.40.50.1470 3 193 1.1E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VCLMA_RS10055 dca53cd2289939e02937410b6a91e1a2 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VCLMA_RS10055 dca53cd2289939e02937410b6a91e1a2 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 3.3E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VCLMA_RS10055 dca53cd2289939e02937410b6a91e1a2 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.756 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VCLMA_RS10055 dca53cd2289939e02937410b6a91e1a2 196 SUPERFAMILY SSF53178 5 194 1.11E-68 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VCLMA_RS10055 dca53cd2289939e02937410b6a91e1a2 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 189 8.2E-53 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VCLMA_RS10055 dca53cd2289939e02937410b6a91e1a2 196 PANTHER PTHR17224 5 195 6.1E-82 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 Pfam PF05175 Methyltransferase small domain 45 137 7.7E-18 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 PANTHER PTHR18895 32 229 1.6E-85 T 22-04-2016 VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 SUPERFAMILY SSF53335 10 185 3.88E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 53.187 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 Gene3D G3DSA:3.40.50.150 30 230 5.5E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 PANTHER PTHR18895:SF73 32 229 1.6E-85 T 22-04-2016 VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 141 165 4.2E-6 T 22-04-2016 VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 111 123 4.2E-6 T 22-04-2016 VCLMA_RS03230 a8d9293dc421fb43657c0ba897290331 240 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 46 60 4.2E-6 T 22-04-2016 VCLMA_RS07405 aa2bb66ef4c43ed75bd9770d2553deaa 477 Gene3D G3DSA:1.20.1250.20 14 187 4.9E-32 T 22-04-2016 VCLMA_RS07405 aa2bb66ef4c43ed75bd9770d2553deaa 477 PANTHER PTHR23501 1 471 2.1E-140 T 22-04-2016 VCLMA_RS07405 aa2bb66ef4c43ed75bd9770d2553deaa 477 Gene3D G3DSA:1.20.1250.20 272 463 5.7E-16 T 22-04-2016 VCLMA_RS07405 aa2bb66ef4c43ed75bd9770d2553deaa 477 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VCLMA_RS07405 aa2bb66ef4c43ed75bd9770d2553deaa 477 PANTHER PTHR23501:SF73 1 471 2.1E-140 T 22-04-2016 VCLMA_RS07405 aa2bb66ef4c43ed75bd9770d2553deaa 477 SUPERFAMILY SSF103473 248 466 1.11E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS07405 aa2bb66ef4c43ed75bd9770d2553deaa 477 SUPERFAMILY SSF103473 4 191 1.11E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS07405 aa2bb66ef4c43ed75bd9770d2553deaa 477 Pfam PF07690 Major Facilitator Superfamily 18 408 2.4E-51 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS06185 7ec8e5b1eea213414cde40397d0c53cc 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 1.6E-70 T 22-04-2016 IPR021334 Protein of unknown function DUF2947 VCLMA_RS01340 c443ccd93e516366f083a1f0a0858f21 519 PANTHER PTHR26402 7 115 9.8E-20 T 22-04-2016 VCLMA_RS01340 c443ccd93e516366f083a1f0a0858f21 519 PANTHER PTHR26402:SF557 7 115 9.8E-20 T 22-04-2016 VCLMA_RS01340 c443ccd93e516366f083a1f0a0858f21 519 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 4.0E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS01340 c443ccd93e516366f083a1f0a0858f21 519 Gene3D G3DSA:1.25.40.10 421 483 1.5E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS01340 c443ccd93e516366f083a1f0a0858f21 519 Gene3D G3DSA:1.25.40.10 316 388 1.5E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS01340 c443ccd93e516366f083a1f0a0858f21 519 SUPERFAMILY SSF46894 6 103 3.68E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VCLMA_RS01340 c443ccd93e516366f083a1f0a0858f21 519 SMART SM00862 24 100 1.2E-13 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VCLMA_RS01340 c443ccd93e516366f083a1f0a0858f21 519 Gene3D G3DSA:1.10.10.10 7 103 2.7E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS16890 3f807346c1adee40bb9e3a25b8f74f70 191 Gene3D G3DSA:3.30.420.40 34 114 1.1E-42 T 22-04-2016 VCLMA_RS16890 3f807346c1adee40bb9e3a25b8f74f70 191 PANTHER PTHR19375:SF173 1 191 1.6E-120 T 22-04-2016 VCLMA_RS16890 3f807346c1adee40bb9e3a25b8f74f70 191 PANTHER PTHR19375 1 191 1.6E-120 T 22-04-2016 VCLMA_RS16890 3f807346c1adee40bb9e3a25b8f74f70 191 Gene3D G3DSA:3.30.420.40 115 190 9.5E-24 T 22-04-2016 VCLMA_RS16890 3f807346c1adee40bb9e3a25b8f74f70 191 SUPERFAMILY SSF53067 2 102 1.81E-32 T 22-04-2016 VCLMA_RS16890 3f807346c1adee40bb9e3a25b8f74f70 191 Pfam PF00012 Hsp70 protein 1 191 3.6E-91 T 22-04-2016 IPR013126 Heat shock protein 70 family VCLMA_RS16890 3f807346c1adee40bb9e3a25b8f74f70 191 SUPERFAMILY SSF53067 105 191 8.39E-29 T 22-04-2016 VCLMA_RS16890 3f807346c1adee40bb9e3a25b8f74f70 191 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 110 123 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site VCLMA_RS16890 3f807346c1adee40bb9e3a25b8f74f70 191 Gene3D G3DSA:3.30.30.30 1 33 7.5E-11 T 22-04-2016 VCLMA_RS08395 722a21f0bd52c42374acbb95d0ffb0e3 190 Pfam PF03695 Uncharacterised protein family (UPF0149) 3 179 1.7E-41 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VCLMA_RS08395 722a21f0bd52c42374acbb95d0ffb0e3 190 SUPERFAMILY SSF101327 2 177 2.22E-34 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VCLMA_RS08395 722a21f0bd52c42374acbb95d0ffb0e3 190 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 2 175 2.3E-41 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 SMART SM00382 315 436 0.0014 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 PANTHER PTHR30258 1 572 0.0 T 22-04-2016 VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 382 396 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 Gene3D G3DSA:3.40.50.300 292 560 1.7E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 Gene3D G3DSA:3.30.450.90 159 287 4.1E-47 T 22-04-2016 VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 PANTHER PTHR30258:SF11 1 572 0.0 T 22-04-2016 VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 SUPERFAMILY SSF52540 175 559 2.01E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 Pfam PF00437 Type II/IV secretion system protein 192 454 7.4E-75 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 SUPERFAMILY SSF160246 5 146 1.2E-38 T 22-04-2016 VCLMA_RS02045 c39d7e363ae996c6dc5b7a58004ba747 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 43 149 1.4E-22 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 VCLMA_RS00735 c32dbb7bc1fed287ba0e0a9d8a5a3d44 330 Pfam PF02687 FtsX-like permease family 208 325 8.3E-11 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VCLMA_RS00735 c32dbb7bc1fed287ba0e0a9d8a5a3d44 330 PIRSF PIRSF003097 31 326 2.0E-63 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 VCLMA_RS04380 b874f9cde6aadcf560e00042eff4d2ef 235 Gene3D G3DSA:1.25.40.10 55 132 5.2E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PANTHER PTHR30332:SF3 17 638 0.0 T 22-04-2016 VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 Pfam PF00263 Bacterial type II and III secretion system protein 449 611 1.6E-50 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 556 589 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PRINTS PR01032 Gene IV protein signature 538 566 1.2E-12 T 22-04-2016 VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PRINTS PR01032 Gene IV protein signature 591 613 1.2E-12 T 22-04-2016 VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PRINTS PR01032 Gene IV protein signature 470 493 1.2E-12 T 22-04-2016 VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 620 7.6E-158 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 Pfam PF03958 Bacterial type II/III secretion system short domain 267 343 6.1E-16 T 22-04-2016 IPR005644 NolW-like VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 Pfam PF03958 Bacterial type II/III secretion system short domain 192 259 7.4E-16 T 22-04-2016 IPR005644 NolW-like VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 Pfam PF03958 Bacterial type II/III secretion system short domain 126 187 2.3E-8 T 22-04-2016 IPR005644 NolW-like VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 445 469 1.7E-37 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 480 490 1.7E-37 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 575 593 1.7E-37 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 598 612 1.7E-37 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 1.7E-37 T 22-04-2016 IPR001775 GspD/PilQ family VCLMA_RS12735 b98bdd1615cdef6fc08bd543fc71d460 674 PANTHER PTHR30332 17 638 0.0 T 22-04-2016 VCLMA_RS11270 42db0f0c8bceea6eb7ef8cfd934b9077 148 PANTHER PTHR38774 2 148 5.9E-60 T 22-04-2016 VCLMA_RS11270 42db0f0c8bceea6eb7ef8cfd934b9077 148 Pfam PF06853 Protein of unknown function (DUF1249) 27 139 2.6E-41 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 VCLMA_RS11270 42db0f0c8bceea6eb7ef8cfd934b9077 148 PANTHER PTHR38774:SF1 2 148 5.9E-60 T 22-04-2016 VCLMA_RS04345 795c61b58731a741b7a7a82b3d194065 957 SUPERFAMILY SSF69318 572 794 3.79E-10 T 22-04-2016 VCLMA_RS04345 795c61b58731a741b7a7a82b3d194065 957 SUPERFAMILY SSF69318 397 491 3.79E-10 T 22-04-2016 VCLMA_RS04345 795c61b58731a741b7a7a82b3d194065 957 ProSitePatterns PS00018 EF-hand calcium-binding domain. 255 267 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site VCLMA_RS04345 795c61b58731a741b7a7a82b3d194065 957 SUPERFAMILY SSF69318 252 487 4.84E-16 T 22-04-2016 VCLMA_RS04345 795c61b58731a741b7a7a82b3d194065 957 Pfam PF16458 Beta-prism lectin 822 955 3.9E-54 T 22-04-2016 IPR032496 Hemolysin, beta-prism lectin VCLMA_RS04345 795c61b58731a741b7a7a82b3d194065 957 Pfam PF16458 Beta-prism lectin 508 637 8.4E-56 T 22-04-2016 IPR032496 Hemolysin, beta-prism lectin VCLMA_RS00840 c8bc14ffaee44db76bda4d3919e44c54 135 SUPERFAMILY SSF46626 58 131 6.03E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00840 c8bc14ffaee44db76bda4d3919e44c54 135 Gene3D G3DSA:1.10.760.10 56 132 1.3E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00840 c8bc14ffaee44db76bda4d3919e44c54 135 PRINTS PR00607 Class IE cytochrome C signature 121 132 3.34E-16 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VCLMA_RS00840 c8bc14ffaee44db76bda4d3919e44c54 135 PRINTS PR00607 Class IE cytochrome C signature 106 118 3.34E-16 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VCLMA_RS00840 c8bc14ffaee44db76bda4d3919e44c54 135 PRINTS PR00607 Class IE cytochrome C signature 78 88 3.34E-16 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VCLMA_RS00840 c8bc14ffaee44db76bda4d3919e44c54 135 PRINTS PR00607 Class IE cytochrome C signature 67 78 3.34E-16 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VCLMA_RS00840 c8bc14ffaee44db76bda4d3919e44c54 135 PANTHER PTHR40942 1 135 1.3E-76 T 22-04-2016 VCLMA_RS00840 c8bc14ffaee44db76bda4d3919e44c54 135 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 57 131 9.6E-15 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS00840 c8bc14ffaee44db76bda4d3919e44c54 135 PANTHER PTHR40942:SF1 1 135 1.3E-76 T 22-04-2016 VCLMA_RS06140 6618ba4c4ec1852cb408cfb9cf3197cc 417 PANTHER PTHR32195:SF19 1 417 2.2E-201 T 22-04-2016 VCLMA_RS06140 6618ba4c4ec1852cb408cfb9cf3197cc 417 PANTHER PTHR32195 1 417 2.2E-201 T 22-04-2016 VCLMA_RS06140 6618ba4c4ec1852cb408cfb9cf3197cc 417 Pfam PF01490 Transmembrane amino acid transporter protein 25 415 1.3E-7 T 22-04-2016 IPR013057 Amino acid transporter, transmembrane domain VCLMA_RS06680 6d78a432e19ccd8e59d2fd60bf972c54 231 Pfam PF11153 Protein of unknown function (DUF2931) 19 215 2.9E-38 T 22-04-2016 IPR021326 Protein of unknown function DUF2931 VCLMA_RS03115 7eeb6222c34580d3a93ddb4c5f8f3416 111 PANTHER PTHR34182 2 111 3.0E-34 T 22-04-2016 VCLMA_RS03115 7eeb6222c34580d3a93ddb4c5f8f3416 111 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.6E-46 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VCLMA_RS03115 7eeb6222c34580d3a93ddb4c5f8f3416 111 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.6E-46 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VCLMA_RS03115 7eeb6222c34580d3a93ddb4c5f8f3416 111 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.6E-46 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VCLMA_RS03115 7eeb6222c34580d3a93ddb4c5f8f3416 111 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.6E-46 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VCLMA_RS03115 7eeb6222c34580d3a93ddb4c5f8f3416 111 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.3E-26 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VCLMA_RS03115 7eeb6222c34580d3a93ddb4c5f8f3416 111 Pfam PF03840 Preprotein translocase SecG subunit 4 72 6.4E-23 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VCLMA_RS12050 b5c9a463e207be38c908743088107eba 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12050 b5c9a463e207be38c908743088107eba 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.4E-25 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12050 b5c9a463e207be38c908743088107eba 63 PANTHER PTHR10916 1 63 1.7E-31 T 22-04-2016 VCLMA_RS12050 b5c9a463e207be38c908743088107eba 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.159 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12050 b5c9a463e207be38c908743088107eba 63 Gene3D G3DSA:1.10.287.310 1 60 4.0E-30 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12050 b5c9a463e207be38c908743088107eba 63 SUPERFAMILY SSF46561 1 61 1.7E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12050 b5c9a463e207be38c908743088107eba 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.7E-24 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS05590 d84ff37e5877e222a9d3835168514e16 109 Pfam PF11872 Protein of unknown function (DUF3392) 3 106 9.9E-40 T 22-04-2016 IPR021813 Protein of unknown function DUF3392 VCLMA_RS10290 cf2f23ea2352c44d08c9bbc6ecaf3de3 146 Pfam PF04214 Protein of unknown function, DUF 48 117 1.2E-32 T 22-04-2016 IPR007332 Protein of unknown function DUF411 VCLMA_RS02035 8175d5ca5fba10776960d3a442f5081f 281 PANTHER PTHR35894:SF1 2 281 7.2E-106 T 22-04-2016 VCLMA_RS02035 8175d5ca5fba10776960d3a442f5081f 281 PANTHER PTHR35894 2 281 7.2E-106 T 22-04-2016 VCLMA_RS02035 8175d5ca5fba10776960d3a442f5081f 281 SUPERFAMILY SSF52540 6 260 1.29E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS02035 8175d5ca5fba10776960d3a442f5081f 281 Pfam PF13401 AAA domain 42 167 2.7E-23 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS02035 8175d5ca5fba10776960d3a442f5081f 281 Gene3D G3DSA:3.40.50.300 30 180 1.5E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS05005 715972071ec6516a5936b96f539374de 100 PANTHER PTHR10815 1 100 2.9E-44 T 22-04-2016 VCLMA_RS05005 715972071ec6516a5936b96f539374de 100 PANTHER PTHR10815:SF2 1 100 2.9E-44 T 22-04-2016 VCLMA_RS05005 715972071ec6516a5936b96f539374de 100 SUPERFAMILY SSF46767 2 84 4.32E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VCLMA_RS05005 715972071ec6516a5936b96f539374de 100 Gene3D G3DSA:1.10.10.10 2 87 1.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS05005 715972071ec6516a5936b96f539374de 100 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 83 1.5E-23 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 VCLMA_RS10040 51734d674f20e1f53eb09b4c7d6afcf5 205 PANTHER PTHR30634:SF11 1 205 4.2E-51 T 22-04-2016 VCLMA_RS10040 51734d674f20e1f53eb09b4c7d6afcf5 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 7 202 6.3E-41 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VCLMA_RS10040 51734d674f20e1f53eb09b4c7d6afcf5 205 PANTHER PTHR30634 1 205 4.2E-51 T 22-04-2016 VCLMA_RS10040 51734d674f20e1f53eb09b4c7d6afcf5 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 203 28.161 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VCLMA_RS10040 51734d674f20e1f53eb09b4c7d6afcf5 205 Gene3D G3DSA:2.50.20.10 14 203 2.7E-62 T 22-04-2016 VCLMA_RS10040 51734d674f20e1f53eb09b4c7d6afcf5 205 Pfam PF03550 Outer membrane lipoprotein LolB 44 201 1.9E-46 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VCLMA_RS10040 51734d674f20e1f53eb09b4c7d6afcf5 205 SUPERFAMILY SSF89392 20 202 2.04E-51 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX VCLMA_RS06130 66c26bd6c5a6c2f81cd85f5b659dd216 120 PANTHER PTHR12589 1 120 3.7E-53 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VCLMA_RS06130 66c26bd6c5a6c2f81cd85f5b659dd216 120 PIRSF PIRSF006113 1 120 4.5E-53 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VCLMA_RS06130 66c26bd6c5a6c2f81cd85f5b659dd216 120 SUPERFAMILY SSF55620 1 119 1.0E-41 T 22-04-2016 VCLMA_RS06130 66c26bd6c5a6c2f81cd85f5b659dd216 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 3.9E-33 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VCLMA_RS06130 66c26bd6c5a6c2f81cd85f5b659dd216 120 Gene3D G3DSA:3.30.479.10 1 120 1.1E-41 T 22-04-2016 VCLMA_RS06130 66c26bd6c5a6c2f81cd85f5b659dd216 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 1.2E-35 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VCLMA_RS01485 6b27ce68f64bc7ace58e9ef5f41d5d13 89 Gene3D G3DSA:3.10.20.30 1 88 8.7E-25 T 22-04-2016 IPR012675 Beta-grasp domain VCLMA_RS01485 6b27ce68f64bc7ace58e9ef5f41d5d13 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VCLMA_RS01485 6b27ce68f64bc7ace58e9ef5f41d5d13 89 SUPERFAMILY SSF54292 1 87 4.98E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS01485 6b27ce68f64bc7ace58e9ef5f41d5d13 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 78 3.1E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VCLMA_RS08195 c99aaedf540f0bd4de098b915d6e9f1a 321 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 28 307 2.0E-96 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 VCLMA_RS08195 c99aaedf540f0bd4de098b915d6e9f1a 321 PIRSF PIRSF006470 1 321 6.6E-75 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VCLMA_RS08195 c99aaedf540f0bd4de098b915d6e9f1a 321 PANTHER PTHR33376 8 321 2.7E-142 T 22-04-2016 VCLMA_RS08195 c99aaedf540f0bd4de098b915d6e9f1a 321 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 29 283 2.9E-76 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 VCLMA_RS08195 c99aaedf540f0bd4de098b915d6e9f1a 321 PANTHER PTHR33376:SF4 8 321 2.7E-142 T 22-04-2016 VCLMA_RS09665 72977802afb491125ada3cac7fd47827 177 SUPERFAMILY SSF82808 63 176 9.68E-49 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VCLMA_RS09665 72977802afb491125ada3cac7fd47827 177 Pfam PF03925 SeqA protein C-terminal domain 68 175 1.4E-45 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VCLMA_RS09665 72977802afb491125ada3cac7fd47827 177 Gene3D G3DSA:1.20.1380.10 66 177 1.1E-50 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VCLMA_RS09665 72977802afb491125ada3cac7fd47827 177 SUPERFAMILY SSF47598 1 34 4.0E-13 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 VCLMA_RS09665 72977802afb491125ada3cac7fd47827 177 Gene3D G3DSA:1.10.1220.10 1 37 3.5E-25 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VCLMA_RS09665 72977802afb491125ada3cac7fd47827 177 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 177 40.866 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 VCLMA_RS14210 125d09d688151f070cfb3d7ee29b16bd 71 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 1 70 5.2E-16 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VCLMA_RS14210 125d09d688151f070cfb3d7ee29b16bd 71 SUPERFAMILY SSF55904 1 71 4.45E-13 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VCLMA_RS14210 125d09d688151f070cfb3d7ee29b16bd 71 Gene3D G3DSA:3.90.100.10 10 70 2.5E-7 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 PANTHER PTHR11935:SF7 1 252 1.2E-101 T 22-04-2016 VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 Pfam PF00753 Metallo-beta-lactamase superfamily 11 166 8.6E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 PANTHER PTHR11935 1 252 1.2E-101 T 22-04-2016 VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 4.6E-26 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 5.1E-104 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 SMART SM00849 12 166 2.1E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 PIRSF PIRSF005457 1 252 4.2E-96 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.104 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 Gene3D G3DSA:3.60.15.10 4 252 1.4E-87 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS10380 8be218349ea3f7318994ffca3fd9548a 252 SUPERFAMILY SSF56281 2 252 2.75E-71 T 22-04-2016 IPR001279 Metallo-beta-lactamase VCLMA_RS09595 de824f33756c8dcc4f22fc99a83ae5cb 262 SMART SM00382 29 198 7.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain VCLMA_RS09595 de824f33756c8dcc4f22fc99a83ae5cb 262 Pfam PF00005 ABC transporter 20 148 1.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS09595 de824f33756c8dcc4f22fc99a83ae5cb 262 SUPERFAMILY SSF52540 3 227 4.13E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09595 de824f33756c8dcc4f22fc99a83ae5cb 262 Gene3D G3DSA:3.40.50.300 3 221 3.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09595 de824f33756c8dcc4f22fc99a83ae5cb 262 PANTHER PTHR24220:SF466 6 241 3.0E-138 T 22-04-2016 VCLMA_RS09595 de824f33756c8dcc4f22fc99a83ae5cb 262 PANTHER PTHR24220 6 241 3.0E-138 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 PANTHER PTHR13789:SF87 6 338 3.5E-82 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 PANTHER PTHR13789 6 338 3.5E-82 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 SUPERFAMILY SSF51905 260 345 7.37E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 SUPERFAMILY SSF51905 6 174 7.37E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 Gene3D G3DSA:3.50.50.60 272 310 5.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 Gene3D G3DSA:3.50.50.60 3 164 5.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 SUPERFAMILY SSF54373 180 265 4.71E-23 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 4.8E-39 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 274 289 4.8E-39 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 307 325 4.8E-39 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 4.8E-39 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 4.8E-39 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 305 4.8E-39 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 Gene3D G3DSA:3.30.9.10 322 375 5.7E-44 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 Gene3D G3DSA:3.30.9.10 165 266 5.7E-44 T 22-04-2016 VCLMA_RS08940 370251ec25d8091bed19d05c80be39ce 487 Pfam PF01494 FAD binding domain 6 339 6.2E-69 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 VCLMA_RS04615 68847888e6c3001ebbd896a1b3471f6f 320 PANTHER PTHR11108 5 317 7.9E-135 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VCLMA_RS04615 68847888e6c3001ebbd896a1b3471f6f 320 SUPERFAMILY SSF53800 4 318 2.13E-102 T 22-04-2016 VCLMA_RS04615 68847888e6c3001ebbd896a1b3471f6f 320 Pfam PF00762 Ferrochelatase 7 319 8.1E-111 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VCLMA_RS04615 68847888e6c3001ebbd896a1b3471f6f 320 Gene3D G3DSA:3.40.50.1400 202 319 3.5E-32 T 22-04-2016 VCLMA_RS04615 68847888e6c3001ebbd896a1b3471f6f 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VCLMA_RS04615 68847888e6c3001ebbd896a1b3471f6f 320 Hamap MF_00323 Ferrochelatase [hemH]. 5 320 37.912 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VCLMA_RS04615 68847888e6c3001ebbd896a1b3471f6f 320 Gene3D G3DSA:3.40.50.1400 5 201 9.8E-69 T 22-04-2016 VCLMA_RS04615 68847888e6c3001ebbd896a1b3471f6f 320 TIGRFAM TIGR00109 hemH: ferrochelatase 4 318 3.2E-108 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 VCLMA_RS00405 bb4e880672c0cd532147e5f0170805e9 175 Gene3D G3DSA:1.20.1260.10 1 162 1.7E-62 T 22-04-2016 IPR012347 Ferritin-related VCLMA_RS00405 bb4e880672c0cd532147e5f0170805e9 175 SUPERFAMILY SSF47240 1 159 4.88E-59 T 22-04-2016 IPR009078 Ferritin-like superfamily VCLMA_RS00405 bb4e880672c0cd532147e5f0170805e9 175 PANTHER PTHR11431 3 166 1.1E-46 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 VCLMA_RS00405 bb4e880672c0cd532147e5f0170805e9 175 Pfam PF00210 Ferritin-like domain 8 143 1.5E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VCLMA_RS00405 bb4e880672c0cd532147e5f0170805e9 175 PANTHER PTHR11431:SF4 3 166 1.1E-46 T 22-04-2016 VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 250 307 2.5E-19 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 307 18.91 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 Gene3D G3DSA:2.30.130.10 249 309 1.7E-25 T 22-04-2016 IPR015947 PUA-like domain VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 SUPERFAMILY SSF55120 9 246 4.89E-81 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 178 4.5E-56 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 246 2.3E-24 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 SUPERFAMILY SSF88697 249 308 1.24E-14 T 22-04-2016 IPR015947 PUA-like domain VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 217 2.0E-84 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 PANTHER PTHR13767 1 307 5.8E-129 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VCLMA_RS03150 9bab95c42a101a7fae8cdd6e355e9d27 311 PANTHER PTHR13767:SF2 1 307 5.8E-129 T 22-04-2016 VCLMA_RS11415 108931ec04a9f2f8f35865976018fecf 156 PANTHER PTHR35867:SF1 6 156 1.1E-39 T 22-04-2016 VCLMA_RS11415 108931ec04a9f2f8f35865976018fecf 156 PANTHER PTHR35867 6 156 1.1E-39 T 22-04-2016 VCLMA_RS11415 108931ec04a9f2f8f35865976018fecf 156 PIRSF PIRSF004923 1 156 1.5E-39 T 22-04-2016 IPR026268 Protein RseC VCLMA_RS11415 108931ec04a9f2f8f35865976018fecf 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 14 149 2.9E-33 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 SMART SM01079 71 267 5.8E-35 T 22-04-2016 IPR006189 CHASE domain VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 351 502 1.8E-34 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 SUPERFAMILY SSF55073 355 505 2.98E-37 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 PANTHER PTHR10799:SF750 379 507 5.3E-20 T 22-04-2016 VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 PANTHER PTHR10799:SF750 145 284 5.3E-20 T 22-04-2016 VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 PANTHER PTHR10799 379 507 5.3E-20 T 22-04-2016 VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 PANTHER PTHR10799 145 284 5.3E-20 T 22-04-2016 VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 Pfam PF03924 CHASE domain 76 265 4.3E-26 T 22-04-2016 IPR006189 CHASE domain VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 SMART SM00267 339 506 2.1E-41 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 Gene3D G3DSA:3.30.70.270 351 508 1.1E-42 T 22-04-2016 VCLMA_RS06500 90b6c6a59d4129defa062fb5209743ae 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 351 506 5.6E-39 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 Pfam PF00366 Ribosomal protein S17 10 77 1.1E-34 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 2.7E-38 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 SUPERFAMILY SSF50249 6 83 2.66E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 4.0E-39 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.339 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 1.1E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 1.1E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 1.1E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 PANTHER PTHR10744 2 82 1.0E-43 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 Gene3D G3DSA:2.40.50.140 6 82 5.7E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS12045 3bfa8cb8c2974760d807f060a4011116 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS08905 eb07f90e4ee7d31bcc7e494210a073de 149 Pfam PF13279 Thioesterase-like superfamily 16 136 2.6E-21 T 22-04-2016 VCLMA_RS08905 eb07f90e4ee7d31bcc7e494210a073de 149 SUPERFAMILY SSF54637 7 136 1.47E-31 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS08905 eb07f90e4ee7d31bcc7e494210a073de 149 Gene3D G3DSA:3.10.129.10 5 142 1.4E-39 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS08905 eb07f90e4ee7d31bcc7e494210a073de 149 PANTHER PTHR31793 2 143 1.9E-44 T 22-04-2016 VCLMA_RS08905 eb07f90e4ee7d31bcc7e494210a073de 149 PANTHER PTHR31793:SF1 2 143 1.9E-44 T 22-04-2016 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.322 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 SUPERFAMILY SSF47729 3 95 2.36E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 5.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 5.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 5.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 PANTHER PTHR33175:SF2 2 93 2.2E-53 T 22-04-2016 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 PANTHER PTHR33175 2 93 2.2E-53 T 22-04-2016 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 SMART SM00411 3 92 3.1E-40 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 7.9E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 Gene3D G3DSA:4.10.520.10 2 93 2.8E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 VCLMA_RS05770 0e1bae147b65b697c0f78a27a9fb9e52 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 1.4E-50 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 VCLMA_RS02155 ff3d875ac2b5b3b112eda38c189ab3ca 145 Pfam PF00582 Universal stress protein family 1 142 7.9E-35 T 22-04-2016 IPR006016 UspA GO:0006950 VCLMA_RS02155 ff3d875ac2b5b3b112eda38c189ab3ca 145 PIRSF PIRSF006276 1 145 3.9E-20 T 22-04-2016 IPR006015 Universal stress protein A VCLMA_RS02155 ff3d875ac2b5b3b112eda38c189ab3ca 145 PANTHER PTHR31964 1 144 2.3E-32 T 22-04-2016 VCLMA_RS02155 ff3d875ac2b5b3b112eda38c189ab3ca 145 PANTHER PTHR31964:SF42 1 144 2.3E-32 T 22-04-2016 VCLMA_RS02155 ff3d875ac2b5b3b112eda38c189ab3ca 145 SUPERFAMILY SSF52402 2 143 4.74E-37 T 22-04-2016 VCLMA_RS02155 ff3d875ac2b5b3b112eda38c189ab3ca 145 PRINTS PR01438 Universal stress protein signature 102 114 1.4E-11 T 22-04-2016 IPR006015 Universal stress protein A VCLMA_RS02155 ff3d875ac2b5b3b112eda38c189ab3ca 145 PRINTS PR01438 Universal stress protein signature 120 142 1.4E-11 T 22-04-2016 IPR006015 Universal stress protein A VCLMA_RS02155 ff3d875ac2b5b3b112eda38c189ab3ca 145 PRINTS PR01438 Universal stress protein signature 2 20 1.4E-11 T 22-04-2016 IPR006015 Universal stress protein A VCLMA_RS02155 ff3d875ac2b5b3b112eda38c189ab3ca 145 Gene3D G3DSA:3.40.50.620 1 144 3.6E-39 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS04200 a7366ac8b3027e3f56b65c68b1dc9671 128 Pfam PF04241 Protein of unknown function (DUF423) 20 110 1.0E-30 T 22-04-2016 IPR006696 Protein of unknown function DUF423 VCLMA_RS04200 a7366ac8b3027e3f56b65c68b1dc9671 128 PANTHER PTHR10584 6 67 1.4E-17 T 22-04-2016 VCLMA_RS04200 a7366ac8b3027e3f56b65c68b1dc9671 128 PANTHER PTHR10584:SF191 6 67 1.4E-17 T 22-04-2016 VCLMA_RS09175 22cf2fc300c70cf73dfc6da15060de4d 95 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 2.9E-29 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 VCLMA_RS07255 bf48fc0863f0982c8d2f05bd4e5c69f5 419 Gene3D G3DSA:1.20.1600.10 22 409 4.4E-57 T 22-04-2016 VCLMA_RS07255 bf48fc0863f0982c8d2f05bd4e5c69f5 419 PANTHER PTHR30026 5 415 6.1E-89 T 22-04-2016 VCLMA_RS07255 bf48fc0863f0982c8d2f05bd4e5c69f5 419 PANTHER PTHR30026:SF7 5 415 6.1E-89 T 22-04-2016 VCLMA_RS07255 bf48fc0863f0982c8d2f05bd4e5c69f5 419 SUPERFAMILY SSF56954 4 408 9.55E-71 T 22-04-2016 VCLMA_RS07255 bf48fc0863f0982c8d2f05bd4e5c69f5 419 Pfam PF02321 Outer membrane efflux protein 226 404 2.4E-26 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VCLMA_RS07255 bf48fc0863f0982c8d2f05bd4e5c69f5 419 Pfam PF02321 Outer membrane efflux protein 26 202 6.7E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 VCLMA_RS01765 ef73c8dbecb0ce4395ceb67fda4f1a4c 75 PANTHER PTHR36508 4 75 3.7E-27 T 22-04-2016 VCLMA_RS01765 ef73c8dbecb0ce4395ceb67fda4f1a4c 75 Pfam PF04102 SlyX 9 75 1.8E-24 T 22-04-2016 IPR007236 SlyX VCLMA_RS01765 ef73c8dbecb0ce4395ceb67fda4f1a4c 75 Gene3D G3DSA:1.20.5.300 7 55 3.4E-22 T 22-04-2016 VCLMA_RS01765 ef73c8dbecb0ce4395ceb67fda4f1a4c 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.452 T 22-04-2016 IPR007236 SlyX VCLMA_RS05815 d082af15050b632cce896db240270307 233 PANTHER PTHR30249 1 228 1.2E-92 T 22-04-2016 VCLMA_RS05815 d082af15050b632cce896db240270307 233 PANTHER PTHR30249:SF5 1 228 1.2E-92 T 22-04-2016 VCLMA_RS05815 d082af15050b632cce896db240270307 233 Pfam PF04172 LrgB-like family 6 227 2.9E-68 T 22-04-2016 IPR007300 CidB/LrgB family VCLMA_RS10810 6a0fb99d149d860ebd503180a7170d99 304 PANTHER PTHR21535 33 302 2.3E-31 T 22-04-2016 VCLMA_RS10810 6a0fb99d149d860ebd503180a7170d99 304 Pfam PF01544 CorA-like Mg2+ transporter protein 20 296 1.4E-55 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VCLMA_RS10810 6a0fb99d149d860ebd503180a7170d99 304 Gene3D G3DSA:1.20.58.340 232 299 8.6E-17 T 22-04-2016 VCLMA_RS10810 6a0fb99d149d860ebd503180a7170d99 304 SUPERFAMILY SSF144083 235 297 2.48E-13 T 22-04-2016 VCLMA_RS10810 6a0fb99d149d860ebd503180a7170d99 304 Gene3D G3DSA:1.20.58.340 128 216 5.2E-5 T 22-04-2016 VCLMA_RS10810 6a0fb99d149d860ebd503180a7170d99 304 SUPERFAMILY SSF143865 17 221 5.75E-32 T 22-04-2016 VCLMA_RS03855 ae43ddb3d65b90cbbb489416dd1f6e18 124 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 39 122 6.5E-31 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS03855 ae43ddb3d65b90cbbb489416dd1f6e18 124 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 11 124 33.865 T 22-04-2016 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS03855 ae43ddb3d65b90cbbb489416dd1f6e18 124 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 43 117 4.1E-21 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 VCLMA_RS09245 05d4e9e2c70e233e773591aca1f3c8e9 196 Gene3D G3DSA:2.40.160.20 41 196 1.3E-18 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VCLMA_RS09245 05d4e9e2c70e233e773591aca1f3c8e9 196 SUPERFAMILY SSF56925 20 196 2.51E-18 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VCLMA_RS01885 ecea5e003ec96f6cc445baed09fd2d15 153 Gene3D G3DSA:3.40.1550.10 1 153 2.6E-43 T 22-04-2016 IPR028976 CheC-like domain VCLMA_RS01885 ecea5e003ec96f6cc445baed09fd2d15 153 PANTHER PTHR39452 1 153 1.1E-80 T 22-04-2016 VCLMA_RS01885 ecea5e003ec96f6cc445baed09fd2d15 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 139 6.8E-22 T 22-04-2016 IPR028051 Chemotaxis phosphatase CheX-like domain KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- VCLMA_RS01885 ecea5e003ec96f6cc445baed09fd2d15 153 PANTHER PTHR39452:SF1 1 153 1.1E-80 T 22-04-2016 VCLMA_RS01885 ecea5e003ec96f6cc445baed09fd2d15 153 SUPERFAMILY SSF103039 1 153 1.31E-37 T 22-04-2016 IPR028976 CheC-like domain VCLMA_RS17225 de9bbb65f4b380d8899c59fb4dd0e9f3 246 PANTHER PTHR32309 1 246 2.5E-68 T 22-04-2016 VCLMA_RS17225 de9bbb65f4b380d8899c59fb4dd0e9f3 246 Pfam PF13807 G-rich domain on putative tyrosine kinase 98 169 6.3E-11 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain VCLMA_RS17225 de9bbb65f4b380d8899c59fb4dd0e9f3 246 PANTHER PTHR32309:SF13 1 246 2.5E-68 T 22-04-2016 VCLMA_RS13125 2e66a261246d0717b6c656f5ca0440ac 84 PANTHER PTHR39573:SF1 1 84 6.8E-42 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 VCLMA_RS13125 2e66a261246d0717b6c656f5ca0440ac 84 Gene3D G3DSA:3.90.1200.10 15 83 7.6E-20 T 22-04-2016 VCLMA_RS13125 2e66a261246d0717b6c656f5ca0440ac 84 SUPERFAMILY SSF56112 3 83 1.44E-25 T 22-04-2016 IPR011009 Protein kinase-like domain VCLMA_RS13125 2e66a261246d0717b6c656f5ca0440ac 84 PANTHER PTHR39573 1 84 6.8E-42 T 22-04-2016 VCLMA_RS13125 2e66a261246d0717b6c656f5ca0440ac 84 Pfam PF01636 Phosphotransferase enzyme family 6 78 2.3E-17 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase VCLMA_RS03010 52a5fc47349d1806d6b1fd1dc8d4fda3 328 PANTHER PTHR30465:SF24 1 325 6.4E-117 T 22-04-2016 VCLMA_RS03010 52a5fc47349d1806d6b1fd1dc8d4fda3 328 PANTHER PTHR30465 1 325 6.4E-117 T 22-04-2016 VCLMA_RS03010 52a5fc47349d1806d6b1fd1dc8d4fda3 328 Gene3D G3DSA:1.10.3720.10 94 320 3.3E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03010 52a5fc47349d1806d6b1fd1dc8d4fda3 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 2.7E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS03010 52a5fc47349d1806d6b1fd1dc8d4fda3 328 SUPERFAMILY SSF161098 93 324 3.27E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS01995 605da67fdd05f4cf784da61a6b25bb8b 290 PANTHER PTHR22572:SF14 4 279 1.7E-103 T 22-04-2016 VCLMA_RS01995 605da67fdd05f4cf784da61a6b25bb8b 290 Pfam PF00483 Nucleotidyl transferase 9 266 2.3E-31 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 VCLMA_RS01995 605da67fdd05f4cf784da61a6b25bb8b 290 PANTHER PTHR22572 4 279 1.7E-103 T 22-04-2016 VCLMA_RS01995 605da67fdd05f4cf784da61a6b25bb8b 290 Gene3D G3DSA:3.90.550.10 3 272 3.9E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS01995 605da67fdd05f4cf784da61a6b25bb8b 290 SUPERFAMILY SSF53448 2 273 1.73E-64 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS01995 605da67fdd05f4cf784da61a6b25bb8b 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 6.1E-126 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 VCLMA_RS05370 44d53e32cc024afa4a1d1462f7a714f2 741 SUPERFAMILY SSF53659 5 740 0.0 T 22-04-2016 VCLMA_RS05370 44d53e32cc024afa4a1d1462f7a714f2 741 Gene3D G3DSA:3.40.718.10 540 646 9.9E-35 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VCLMA_RS05370 44d53e32cc024afa4a1d1462f7a714f2 741 Gene3D G3DSA:3.40.718.10 188 289 9.9E-35 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VCLMA_RS05370 44d53e32cc024afa4a1d1462f7a714f2 741 Gene3D G3DSA:3.40.718.10 341 364 9.9E-35 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 VCLMA_RS05370 44d53e32cc024afa4a1d1462f7a714f2 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VCLMA_RS05370 44d53e32cc024afa4a1d1462f7a714f2 741 PANTHER PTHR36999 2 741 0.0 T 22-04-2016 VCLMA_RS05370 44d53e32cc024afa4a1d1462f7a714f2 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VCLMA_RS05370 44d53e32cc024afa4a1d1462f7a714f2 741 PIRSF PIRSF009407 1 741 0.0 T 22-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.468 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 188 1.5E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 Pfam PF00183 Hsp90 protein 226 632 3.8E-129 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 SUPERFAMILY SSF110942 520 631 6.67E-33 T 22-04-2016 VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 Gene3D G3DSA:3.30.565.10 10 245 7.9E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PANTHER PTHR11528 2 631 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PRINTS PR00775 90kDa heat shock protein signature 177 194 6.2E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PRINTS PR00775 90kDa heat shock protein signature 31 53 6.2E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PRINTS PR00775 90kDa heat shock protein signature 125 147 6.2E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PRINTS PR00775 90kDa heat shock protein signature 195 213 6.2E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PRINTS PR00775 90kDa heat shock protein signature 10 30 6.2E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PRINTS PR00775 90kDa heat shock protein signature 80 97 6.2E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PRINTS PR00775 90kDa heat shock protein signature 98 115 6.2E-64 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PIRSF PIRSF002583 1 635 6.0E-218 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 SUPERFAMILY SSF55874 10 219 2.62E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 PANTHER PTHR11528:SF44 2 631 0.0 T 22-04-2016 VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 SMART SM00387 32 189 1.8E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain VCLMA_RS04605 d2e024a182eff89a05583a39d449891d 635 SUPERFAMILY SSF54211 238 493 2.88E-99 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold VCLMA_RS08085 dcb4525c3e58b45274dc0b85d99859d5 72 SMART SM00316 4 72 4.8E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 VCLMA_RS08085 dcb4525c3e58b45274dc0b85d99859d5 72 SUPERFAMILY SSF50249 1 70 9.43E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08085 dcb4525c3e58b45274dc0b85d99859d5 72 Gene3D G3DSA:2.40.50.140 1 71 3.9E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS08085 dcb4525c3e58b45274dc0b85d99859d5 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.5E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VCLMA_RS08085 dcb4525c3e58b45274dc0b85d99859d5 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.5E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VCLMA_RS08085 dcb4525c3e58b45274dc0b85d99859d5 72 PANTHER PTHR33370 1 72 2.5E-50 T 22-04-2016 VCLMA_RS08085 dcb4525c3e58b45274dc0b85d99859d5 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.238 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VCLMA_RS06910 ca5e0e71be73658bac12afb901ec779f 336 Gene3D G3DSA:3.20.20.70 1 336 2.4E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS06910 ca5e0e71be73658bac12afb901ec779f 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VCLMA_RS06910 ca5e0e71be73658bac12afb901ec779f 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 VCLMA_RS06910 ca5e0e71be73658bac12afb901ec779f 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.3E-89 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VCLMA_RS06910 ca5e0e71be73658bac12afb901ec779f 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.074 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS06910 ca5e0e71be73658bac12afb901ec779f 336 SUPERFAMILY SSF51395 1 336 2.13E-106 T 22-04-2016 VCLMA_RS06910 ca5e0e71be73658bac12afb901ec779f 336 PANTHER PTHR11938 5 335 4.2E-104 T 22-04-2016 VCLMA_RS06910 ca5e0e71be73658bac12afb901ec779f 336 PIRSF PIRSF000164 10 336 1.1E-102 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 VCLMA_RS06910 ca5e0e71be73658bac12afb901ec779f 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.9E-147 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 VCLMA_RS02940 65a53842d24c5a06cbe58712de7fe232 126 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 30.952 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VCLMA_RS02940 65a53842d24c5a06cbe58712de7fe232 126 PIRSF PIRSF006287 1 123 7.4E-49 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VCLMA_RS02940 65a53842d24c5a06cbe58712de7fe232 126 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 4.0E-61 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VCLMA_RS02940 65a53842d24c5a06cbe58712de7fe232 126 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 2.3E-41 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 PIRSF PIRSF036761 1 1610 0.0 T 22-04-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 Gene3D G3DSA:3.40.50.720 942 1053 5.5E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 Gene3D G3DSA:3.40.50.720 1108 1201 5.5E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 Gene3D G3DSA:3.40.192.10 800 913 6.8E-4 T 22-04-2016 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 PANTHER PTHR11606 49 150 0.0 T 22-04-2016 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 PANTHER PTHR11606 673 1097 0.0 T 22-04-2016 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 PANTHER PTHR11606 215 562 0.0 T 22-04-2016 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 PANTHER PTHR11606 1122 1367 0.0 T 22-04-2016 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 22-04-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 SUPERFAMILY SSF51735 1083 1282 1.51E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 SUPERFAMILY SSF51735 945 1047 1.51E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 SUPERFAMILY SSF53223 754 940 1.06E-25 T 22-04-2016 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 PANTHER PTHR11606:SF1 49 150 0.0 T 22-04-2016 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 PANTHER PTHR11606:SF1 673 1097 0.0 T 22-04-2016 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 PANTHER PTHR11606:SF1 215 562 0.0 T 22-04-2016 VCLMA_RS06915 35e59b80ed5490a2bd32ff509c626325 1613 PANTHER PTHR11606:SF1 1122 1367 0.0 T 22-04-2016 VCLMA_RS00240 1340dd297d31a62d5d5afbb2e8bf5a21 158 Pfam PF04361 Protein of unknown function (DUF494) 2 158 8.9E-60 T 22-04-2016 IPR007456 Smg VCLMA_RS00240 1340dd297d31a62d5d5afbb2e8bf5a21 158 PANTHER PTHR38692 1 158 5.8E-86 T 22-04-2016 VCLMA_RS00240 1340dd297d31a62d5d5afbb2e8bf5a21 158 PANTHER PTHR38692:SF1 1 158 5.8E-86 T 22-04-2016 VCLMA_RS00240 1340dd297d31a62d5d5afbb2e8bf5a21 158 Hamap MF_00598 Protein Smg [smg]. 2 158 32.843 T 22-04-2016 IPR007456 Smg VCLMA_RS07275 afa2c949fd7e58567e712eb58242ba0a 330 PANTHER PTHR30365 1 329 2.0E-164 T 22-04-2016 VCLMA_RS07275 afa2c949fd7e58567e712eb58242ba0a 330 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 320 1.7E-80 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VCLMA_RS07275 afa2c949fd7e58567e712eb58242ba0a 330 PANTHER PTHR30365:SF1 1 329 2.0E-164 T 22-04-2016 VCLMA_RS08000 257b13267fc85af07a56049b293ab9c5 260 Pfam PF08241 Methyltransferase domain 52 148 2.5E-13 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 VCLMA_RS08000 257b13267fc85af07a56049b293ab9c5 260 SUPERFAMILY SSF53335 5 259 3.25E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS08000 257b13267fc85af07a56049b293ab9c5 260 PANTHER PTHR10108:SF919 3 205 3.2E-29 T 22-04-2016 VCLMA_RS08000 257b13267fc85af07a56049b293ab9c5 260 PANTHER PTHR10108 3 205 3.2E-29 T 22-04-2016 VCLMA_RS08000 257b13267fc85af07a56049b293ab9c5 260 Gene3D G3DSA:3.40.50.150 33 259 4.8E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 Pfam PF00733 Asparagine synthase 367 511 8.4E-40 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 Pfam PF00733 Asparagine synthase 211 366 4.6E-55 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 372 3.6E-116 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 SUPERFAMILY SSF56235 1 196 3.77E-57 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 SUPERFAMILY SSF52402 210 479 5.03E-73 T 22-04-2016 VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 PANTHER PTHR11772:SF11 2 538 3.7E-301 T 22-04-2016 VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 PANTHER PTHR11772 2 538 3.7E-301 T 22-04-2016 VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 2.4E-40 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 Gene3D G3DSA:3.40.50.620 195 510 3.2E-114 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS04630 1b7cb3273a0bbab83b9d09f41ad08db8 554 Gene3D G3DSA:3.60.20.10 2 190 9.7E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.3E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.3E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.3E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.5E-43 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 Pfam PF01016 Ribosomal L27 protein 2 82 1.4E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 PANTHER PTHR15893 1 86 2.0E-53 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.389 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 Gene3D G3DSA:2.40.50.100 20 82 1.3E-32 T 22-04-2016 VCLMA_RS02195 b69a70c0fe18d07231884be99fa864bd 86 SUPERFAMILY SSF110324 2 80 8.72E-35 T 22-04-2016 VCLMA_RS04235 e007ce31aa478a58e4c4480541bcdfb2 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 1.7E-113 T 22-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VCLMA_RS04235 e007ce31aa478a58e4c4480541bcdfb2 258 PIRSF PIRSF029037 1 258 5.9E-115 T 22-04-2016 IPR016908 Uncharacterised conserved protein UCP029037 VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 PANTHER PTHR33209 1 616 3.9E-232 T 22-04-2016 VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 PANTHER PTHR33209:SF1 1 616 3.9E-232 T 22-04-2016 VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 Gene3D G3DSA:3.90.226.10 29 174 9.0E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 Gene3D G3DSA:3.90.226.10 323 431 2.5E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 Gene3D G3DSA:3.90.226.10 468 552 2.5E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 Gene3D G3DSA:3.90.226.10 217 312 9.0E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 SUPERFAMILY SSF52096 209 284 3.68E-27 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 SUPERFAMILY SSF52096 40 178 3.68E-27 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 Pfam PF01343 Peptidase family S49 391 541 1.6E-45 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 Pfam PF01343 Peptidase family S49 138 294 3.9E-31 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 1.7E-190 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 PIRSF PIRSF001217 8 616 1.1E-221 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 539 2.7E-53 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 SUPERFAMILY SSF52096 324 439 1.24E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS09165 8396382ea4bba42eda927efab60656af 616 SUPERFAMILY SSF52096 467 529 1.24E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain VCLMA_RS12425 895aebceabdc74ab48724ac083cefbb9 116 PANTHER PTHR37950 2 116 3.6E-44 T 22-04-2016 VCLMA_RS12425 895aebceabdc74ab48724ac083cefbb9 116 SUPERFAMILY SSF55331 2 115 1.83E-35 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily VCLMA_RS12425 895aebceabdc74ab48724ac083cefbb9 116 Gene3D G3DSA:3.30.429.10 1 115 8.5E-39 T 22-04-2016 VCLMA_RS12425 895aebceabdc74ab48724ac083cefbb9 116 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 90 5.0E-6 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 VCLMA_RS12425 895aebceabdc74ab48724ac083cefbb9 116 PANTHER PTHR37950:SF1 2 116 3.6E-44 T 22-04-2016 VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 SUPERFAMILY SSF103647 29 80 1.01E-9 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 PRINTS PR01021 OMPA domain signature 93 115 8.1E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 PRINTS PR01021 OMPA domain signature 138 154 8.1E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 PRINTS PR01021 OMPA domain signature 123 138 8.1E-9 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 Gene3D G3DSA:3.30.1330.60 90 195 4.7E-29 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 SUPERFAMILY SSF103088 63 192 3.92E-29 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 Gene3D G3DSA:4.10.1080.10 46 78 2.0E-5 T 22-04-2016 IPR028974 TSP type-3 repeat GO:0005509 VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 PANTHER PTHR30128 39 212 3.0E-87 T 22-04-2016 VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 PANTHER PTHR30128:SF15 39 212 3.0E-87 T 22-04-2016 VCLMA_RS07540 7992d755b6b56930f6c317eb7aa067d8 212 Pfam PF00691 OmpA family 92 187 3.3E-16 T 22-04-2016 IPR006665 OmpA-like domain VCLMA_RS00655 379ae1ba2039acda39b528cab086f2e6 514 PIRSF PIRSF028175 1 514 5.0E-303 T 22-04-2016 IPR014540 Uncharacterised conserved protein UCP028175 VCLMA_RS04245 fd20164ccb13a959945131791d1675cb 225 Gene3D G3DSA:1.10.3720.10 13 224 6.8E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS04245 fd20164ccb13a959945131791d1675cb 225 SUPERFAMILY SSF161098 15 210 2.62E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS04245 fd20164ccb13a959945131791d1675cb 225 PANTHER PTHR30450 1 225 4.5E-122 T 22-04-2016 VCLMA_RS04245 fd20164ccb13a959945131791d1675cb 225 PANTHER PTHR30450:SF1 1 225 4.5E-122 T 22-04-2016 VCLMA_RS04245 fd20164ccb13a959945131791d1675cb 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 1.9E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS00830 0f06cb4bd241d2aa8ed6d8a583d8fe2a 163 SUPERFAMILY SSF46689 1 54 2.98E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 VCLMA_RS00830 0f06cb4bd241d2aa8ed6d8a583d8fe2a 163 PANTHER PTHR30055 1 160 6.8E-65 T 22-04-2016 VCLMA_RS00830 0f06cb4bd241d2aa8ed6d8a583d8fe2a 163 PANTHER PTHR30055:SF82 1 160 6.8E-65 T 22-04-2016 VCLMA_RS00830 0f06cb4bd241d2aa8ed6d8a583d8fe2a 163 Gene3D G3DSA:1.10.357.10 1 160 1.4E-22 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 VCLMA_RS00830 0f06cb4bd241d2aa8ed6d8a583d8fe2a 163 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 29 8.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VCLMA_RS03635 bdc0803d80de41cd33254c1bfd1d638c 127 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 1.4E-69 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 VCLMA_RS03635 bdc0803d80de41cd33254c1bfd1d638c 127 Pfam PF01592 NifU-like N terminal domain 2 125 4.9E-57 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 VCLMA_RS03635 bdc0803d80de41cd33254c1bfd1d638c 127 PANTHER PTHR10093 1 126 5.3E-102 T 22-04-2016 VCLMA_RS03635 bdc0803d80de41cd33254c1bfd1d638c 127 Gene3D G3DSA:3.90.1010.10 2 126 1.4E-56 T 22-04-2016 VCLMA_RS03635 bdc0803d80de41cd33254c1bfd1d638c 127 PANTHER PTHR10093:SF3 1 126 5.3E-102 T 22-04-2016 VCLMA_RS03635 bdc0803d80de41cd33254c1bfd1d638c 127 SUPERFAMILY SSF82649 1 125 2.49E-48 T 22-04-2016 VCLMA_RS05645 fa848736ae01f167e62434710a6a020f 153 PANTHER PTHR12714 13 153 3.0E-29 T 22-04-2016 VCLMA_RS05645 fa848736ae01f167e62434710a6a020f 153 Pfam PF04191 Phospholipid methyltransferase 44 142 1.9E-10 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 VCLMA_RS05645 fa848736ae01f167e62434710a6a020f 153 PANTHER PTHR12714:SF7 13 153 3.0E-29 T 22-04-2016 VCLMA_RS05645 fa848736ae01f167e62434710a6a020f 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 108 153 2.0E-20 T 22-04-2016 VCLMA_RS08950 162b222c0f7366f4d05509cb136a8994 608 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 354 567 3.1E-8 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 VCLMA_RS08950 162b222c0f7366f4d05509cb136a8994 608 SUPERFAMILY SSF51197 352 567 1.1E-10 T 22-04-2016 VCLMA_RS08950 162b222c0f7366f4d05509cb136a8994 608 Pfam PF05141 Pyoverdine/dityrosine biosynthesis protein 39 291 2.3E-63 T 22-04-2016 IPR007817 Pyoverdine biosynthesis VCLMA_RS08950 162b222c0f7366f4d05509cb136a8994 608 PANTHER PTHR10696:SF26 426 567 3.8E-46 T 22-04-2016 VCLMA_RS08950 162b222c0f7366f4d05509cb136a8994 608 Gene3D G3DSA:3.60.130.10 349 567 6.7E-10 T 22-04-2016 VCLMA_RS08950 162b222c0f7366f4d05509cb136a8994 608 PANTHER PTHR10696 426 567 3.8E-46 T 22-04-2016 VCLMA_RS03335 aa69bbbfda5f4318ed354baf85bf8608 144 PANTHER PTHR10516 4 76 1.1E-15 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VCLMA_RS03335 aa69bbbfda5f4318ed354baf85bf8608 144 PANTHER PTHR10516:SF329 4 76 1.1E-15 T 22-04-2016 VCLMA_RS03335 aa69bbbfda5f4318ed354baf85bf8608 144 PANTHER PTHR10516:SF329 133 144 1.1E-15 T 22-04-2016 VCLMA_RS03335 aa69bbbfda5f4318ed354baf85bf8608 144 Gene3D G3DSA:3.10.50.40 130 144 3.3E-19 T 22-04-2016 VCLMA_RS03335 aa69bbbfda5f4318ed354baf85bf8608 144 Gene3D G3DSA:3.10.50.40 5 79 3.3E-19 T 22-04-2016 VCLMA_RS03335 aa69bbbfda5f4318ed354baf85bf8608 144 SUPERFAMILY SSF54534 4 143 5.5E-39 T 22-04-2016 VCLMA_RS03335 aa69bbbfda5f4318ed354baf85bf8608 144 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 6 140 5.4E-13 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 VCLMA_RS03335 aa69bbbfda5f4318ed354baf85bf8608 144 PANTHER PTHR10516 133 144 1.1E-15 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VCLMA_RS00895 cc50e206818ff15e198de3d52f73d42f 315 Pfam PF05036 Sporulation related domain 62 132 2.7E-4 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 SUPERFAMILY SSF52374 3 282 6.52E-85 T 22-04-2016 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 PANTHER PTHR11451 1 221 1.3E-119 T 22-04-2016 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 233 4.2E-42 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 269 5.5E-112 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 Gene3D G3DSA:3.40.50.620 3 68 1.7E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 Gene3D G3DSA:3.40.50.620 170 218 1.7E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 Gene3D G3DSA:3.90.800.10 69 168 1.1E-16 T 22-04-2016 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 39.402 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 PANTHER PTHR11451:SF35 1 221 1.3E-119 T 22-04-2016 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.4E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 1.4E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 1.4E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.4E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS02900 1d41be3909cf4aa75f1c48debdaeb40b 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.4E-13 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 VCLMA_RS06945 2235d275f58c278125640da9e40e33f5 157 Pfam PF13185 GAF domain 44 145 3.4E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 VCLMA_RS06945 2235d275f58c278125640da9e40e33f5 157 SUPERFAMILY SSF55781 4 145 2.45E-39 T 22-04-2016 IPR029016 GAF domain-like VCLMA_RS06945 2235d275f58c278125640da9e40e33f5 157 Gene3D G3DSA:3.30.450.40 4 150 7.6E-48 T 22-04-2016 IPR029016 GAF domain-like VCLMA_RS06945 2235d275f58c278125640da9e40e33f5 157 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 89 106 - T 22-04-2016 IPR000614 Free Met sulfoxide reductase conserved site VCLMA_RS06945 2235d275f58c278125640da9e40e33f5 157 PANTHER PTHR21021 3 142 2.1E-55 T 22-04-2016 VCLMA_RS01795 c13a43ebd0407d61c776fb24823ff1fe 91 SUPERFAMILY SSF75169 1 91 3.92E-21 T 22-04-2016 IPR027396 DsrEFH-like VCLMA_RS01795 c13a43ebd0407d61c776fb24823ff1fe 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 91 1.4E-23 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VCLMA_RS01795 c13a43ebd0407d61c776fb24823ff1fe 91 Gene3D G3DSA:3.40.1260.10 1 89 1.1E-21 T 22-04-2016 IPR027396 DsrEFH-like VCLMA_RS01795 c13a43ebd0407d61c776fb24823ff1fe 91 PANTHER PTHR37526 1 91 5.0E-35 T 22-04-2016 VCLMA_RS01795 c13a43ebd0407d61c776fb24823ff1fe 91 Pfam PF04077 DsrH like protein 10 87 2.2E-20 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VCLMA_RS00630 504909ce0fe11d45495fac95e456a56e 232 Gene3D G3DSA:3.30.450.40 53 215 0.001 T 22-04-2016 IPR029016 GAF domain-like VCLMA_RS00630 504909ce0fe11d45495fac95e456a56e 232 Pfam PF04340 Protein of unknown function, DUF484 5 221 3.8E-86 T 22-04-2016 IPR007435 Protein of unknown function DUF484 VCLMA_RS00630 504909ce0fe11d45495fac95e456a56e 232 PANTHER PTHR38765 1 225 8.8E-90 T 22-04-2016 VCLMA_RS01835 992ab39b5bc7a80e38a0b8582ea61702 100 Pfam PF00436 Single-strand binding protein family 3 88 2.0E-9 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 VCLMA_RS01835 992ab39b5bc7a80e38a0b8582ea61702 100 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 27.435 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VCLMA_RS01835 992ab39b5bc7a80e38a0b8582ea61702 100 SUPERFAMILY SSF50249 1 99 2.6E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS01835 992ab39b5bc7a80e38a0b8582ea61702 100 PIRSF PIRSF003135 1 100 2.8E-45 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VCLMA_RS01835 992ab39b5bc7a80e38a0b8582ea61702 100 Gene3D G3DSA:2.40.50.140 1 99 1.7E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS01835 992ab39b5bc7a80e38a0b8582ea61702 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 100 2.6E-32 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VCLMA_RS06740 2c9be60d3bad222ccb9e4de00aabdd2d 219 Pfam PF11205 Protein of unknown function (DUF2987) 22 165 4.7E-54 T 22-04-2016 IPR021370 Protein of unknown function DUF2987 VCLMA_RS11025 94a433844931023df33f7d1505eaa615 317 PANTHER PTHR34308:SF1 4 317 8.4E-95 T 22-04-2016 VCLMA_RS11025 94a433844931023df33f7d1505eaa615 317 Pfam PF03186 CobD/Cbib protein 19 289 1.4E-35 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 VCLMA_RS11025 94a433844931023df33f7d1505eaa615 317 PANTHER PTHR34308 4 317 8.4E-95 T 22-04-2016 VCLMA_RS10960 1a5a3930900f5dde5e86efb830e573bb 141 PIRSF PIRSF028680 1 141 3.4E-70 T 22-04-2016 IPR016895 Uncharacterised conserved protein UCP028680 VCLMA_RS10960 1a5a3930900f5dde5e86efb830e573bb 141 SUPERFAMILY SSF56935 29 134 7.51E-5 T 22-04-2016 VCLMA_RS07030 363489982252725146692198682d10e8 553 SUPERFAMILY SSF54862 143 238 4.57E-40 T 22-04-2016 VCLMA_RS07030 363489982252725146692198682d10e8 553 SUPERFAMILY SSF54862 415 514 4.57E-40 T 22-04-2016 VCLMA_RS07030 363489982252725146692198682d10e8 553 Gene3D G3DSA:3.30.70.20 172 247 2.3E-13 T 22-04-2016 VCLMA_RS07030 363489982252725146692198682d10e8 553 PANTHER PTHR24960 86 244 4.2E-110 T 22-04-2016 VCLMA_RS07030 363489982252725146692198682d10e8 553 PANTHER PTHR24960 412 545 4.2E-110 T 22-04-2016 VCLMA_RS07030 363489982252725146692198682d10e8 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS07030 363489982252725146692198682d10e8 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 420 431 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VCLMA_RS07030 363489982252725146692198682d10e8 553 PANTHER PTHR24960:SF43 86 244 4.2E-110 T 22-04-2016 VCLMA_RS07030 363489982252725146692198682d10e8 553 PANTHER PTHR24960:SF43 412 545 4.2E-110 T 22-04-2016 VCLMA_RS07030 363489982252725146692198682d10e8 553 Pfam PF13187 4Fe-4S dicluster domain 419 465 9.9E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCLMA_RS07030 363489982252725146692198682d10e8 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 1.8E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VCLMA_RS07030 363489982252725146692198682d10e8 553 Gene3D G3DSA:3.30.70.20 417 480 1.0E-19 T 22-04-2016 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.0E-49 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 SUPERFAMILY SSF47928 3 105 9.68E-26 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 17.928 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 4.6E-59 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 PANTHER PTHR11910 7 176 1.5E-51 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 VCLMA_RS12960 f04527291740ad8d431349e3056a3137 177 Gene3D G3DSA:1.10.520.20 3 105 1.0E-32 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VCLMA_RS09010 6b701c113e1fbb7e9a99d42e4e2c6366 107 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 1.5E-35 T 22-04-2016 IPR023163 SMc04008-like domain VCLMA_RS09010 6b701c113e1fbb7e9a99d42e4e2c6366 107 SUPERFAMILY SSF158757 8 85 2.62E-35 T 22-04-2016 IPR023163 SMc04008-like domain VCLMA_RS09010 6b701c113e1fbb7e9a99d42e4e2c6366 107 Gene3D G3DSA:1.10.3340.10 6 92 2.0E-43 T 22-04-2016 IPR023163 SMc04008-like domain VCLMA_RS11995 384ed68e128bfb03e0ab1ced085db526 144 SUPERFAMILY SSF52080 4 143 5.1E-46 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P VCLMA_RS11995 384ed68e128bfb03e0ab1ced085db526 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS11995 384ed68e128bfb03e0ab1ced085db526 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 2.7E-31 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P VCLMA_RS11995 384ed68e128bfb03e0ab1ced085db526 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 143 5.6E-49 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VCLMA_RS11995 384ed68e128bfb03e0ab1ced085db526 144 Gene3D G3DSA:3.100.10.10 32 143 1.1E-26 T 22-04-2016 VCLMA_RS11995 384ed68e128bfb03e0ab1ced085db526 144 PANTHER PTHR12934 1 144 2.5E-70 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 VCLMA_RS11995 384ed68e128bfb03e0ab1ced085db526 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.026 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 Gene3D G3DSA:1.20.1250.20 22 198 3.2E-30 T 22-04-2016 VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 SUPERFAMILY SSF103473 475 503 2.75E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 SUPERFAMILY SSF103473 8 207 2.75E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 SUPERFAMILY SSF103473 256 427 2.75E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 Gene3D G3DSA:1.20.1250.20 480 503 5.1E-16 T 22-04-2016 VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 Gene3D G3DSA:1.20.1250.20 271 431 5.1E-16 T 22-04-2016 VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 22 498 2.4E-130 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 PANTHER PTHR23501 3 503 9.7E-272 T 22-04-2016 VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 PANTHER PTHR23501:SF52 3 503 9.7E-272 T 22-04-2016 VCLMA_RS06655 823c7c97f390232fc71e70af65e94a38 511 Pfam PF07690 Major Facilitator Superfamily 24 417 1.3E-51 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS07280 0c9d5f67923bbf944a90bfd8885d88f6 445 PIRSF PIRSF006446 1 444 1.6E-170 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 VCLMA_RS07280 0c9d5f67923bbf944a90bfd8885d88f6 445 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 429 1.8E-155 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 VCLMA_RS07280 0c9d5f67923bbf944a90bfd8885d88f6 445 PANTHER PTHR30365 1 429 2.5E-260 T 22-04-2016 VCLMA_RS07280 0c9d5f67923bbf944a90bfd8885d88f6 445 PANTHER PTHR30365:SF8 1 429 2.5E-260 T 22-04-2016 VCLMA_RS09370 8694945992dbbf59f3d0b8ad8082adf2 481 PANTHER PTHR33451 5 478 0.0 T 22-04-2016 VCLMA_RS09370 8694945992dbbf59f3d0b8ad8082adf2 481 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 2.6E-163 T 22-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VCLMA_RS09370 8694945992dbbf59f3d0b8ad8082adf2 481 Pfam PF03553 Na+/H+ antiporter family 161 453 3.8E-67 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VCLMA_RS09370 8694945992dbbf59f3d0b8ad8082adf2 481 PANTHER PTHR33451:SF1 5 478 0.0 T 22-04-2016 VCLMA_RS09440 d273fa6c0b81818168ec17218d3dd018 404 Gene3D G3DSA:1.25.40.10 159 203 6.7E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS09440 d273fa6c0b81818168ec17218d3dd018 404 SUPERFAMILY SSF48452 161 265 1.03E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS09440 d273fa6c0b81818168ec17218d3dd018 404 Gene3D G3DSA:1.25.40.10 204 288 1.8E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS09440 d273fa6c0b81818168ec17218d3dd018 404 PANTHER PTHR30009:SF10 1 285 3.5E-20 T 22-04-2016 VCLMA_RS09440 d273fa6c0b81818168ec17218d3dd018 404 Pfam PF14559 Tetratricopeptide repeat 177 244 2.1E-7 T 22-04-2016 VCLMA_RS09440 d273fa6c0b81818168ec17218d3dd018 404 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 117 6.0E-31 T 22-04-2016 IPR017560 Cytochrome c-type biogenesis protein CcmI VCLMA_RS09440 d273fa6c0b81818168ec17218d3dd018 404 PANTHER PTHR30009 1 285 3.5E-20 T 22-04-2016 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 SUPERFAMILY SSF81648 297 411 1.0E-33 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 PANTHER PTHR19271 247 414 7.8E-271 T 22-04-2016 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 PANTHER PTHR19271 1 221 7.8E-271 T 22-04-2016 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 2.1E-65 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 SUPERFAMILY SSF81342 248 296 2.67E-92 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 SUPERFAMILY SSF81342 6 221 2.67E-92 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 PIRSF PIRSF038885 1 421 2.8E-153 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 Gene3D G3DSA:1.20.810.10 6 416 1.4E-157 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 PANTHER PTHR19271:SF9 247 414 7.8E-271 T 22-04-2016 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 PANTHER PTHR19271:SF9 1 221 7.8E-271 T 22-04-2016 VCLMA_RS02805 b86c01f2edcd9f1fbad013fe6f3a8d96 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 9.0E-42 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 Gene3D G3DSA:1.20.120.530 83 226 1.2E-32 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 SUPERFAMILY SSF48008 87 223 7.32E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 Pfam PF07729 FCD domain 90 216 1.5E-26 T 22-04-2016 IPR011711 GntR, C-terminal VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 PANTHER PTHR11751 15 106 5.4E-59 T 22-04-2016 VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 SMART SM00345 22 80 6.3E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 SUPERFAMILY SSF46785 15 107 2.17E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 SMART SM00895 90 217 2.7E-23 T 22-04-2016 IPR011711 GntR, C-terminal VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 PANTHER PTHR11751:SF426 15 106 5.4E-59 T 22-04-2016 VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 80 2.6E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VCLMA_RS06305 259f82fbef188bcef9f33128136b98a9 234 Gene3D G3DSA:1.10.10.10 7 81 2.7E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS05875 77d1a897c544a7acabf63a6d2daf4b45 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 5.8E-9 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 VCLMA_RS05875 77d1a897c544a7acabf63a6d2daf4b45 191 Gene3D G3DSA:1.10.3420.10 12 127 6.4E-18 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VCLMA_RS05875 77d1a897c544a7acabf63a6d2daf4b45 191 Gene3D G3DSA:1.10.3420.10 165 189 6.4E-18 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.326 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 154 7.0E-84 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 PIRSF PIRSF006160 1 162 2.9E-66 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 1.4E-61 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 1.17E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.17E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.17E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.17E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 1.17E-51 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 SUPERFAMILY SSF63411 4 162 1.47E-65 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 Gene3D G3DSA:3.30.1360.80 1 171 1.1E-75 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VCLMA_RS02725 8e7a5d270231c144832eea4aca1b0e85 172 PANTHER PTHR35799 2 169 3.2E-105 T 22-04-2016 VCLMA_RS04220 544cadc79820f4298f7ea5b0cf45fd08 753 Gene3D G3DSA:1.25.40.10 180 383 1.2E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS04220 544cadc79820f4298f7ea5b0cf45fd08 753 SMART SM00028 83 116 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS04220 544cadc79820f4298f7ea5b0cf45fd08 753 SMART SM00028 409 442 230.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS04220 544cadc79820f4298f7ea5b0cf45fd08 753 SMART SM00028 289 322 0.011 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS04220 544cadc79820f4298f7ea5b0cf45fd08 753 SMART SM00028 249 282 19.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 VCLMA_RS04220 544cadc79820f4298f7ea5b0cf45fd08 753 SUPERFAMILY SSF48452 171 358 2.89E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 VCLMA_RS04220 544cadc79820f4298f7ea5b0cf45fd08 753 Pfam PF13424 Tetratricopeptide repeat 249 312 2.4E-7 T 22-04-2016 VCLMA_RS10705 846867ab2a000fa203e5852480d63da9 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 52 76 1.2E-5 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 VCLMA_RS10705 846867ab2a000fa203e5852480d63da9 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 109 129 1.2E-5 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 VCLMA_RS10705 846867ab2a000fa203e5852480d63da9 266 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 172 195 1.2E-5 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 VCLMA_RS10705 846867ab2a000fa203e5852480d63da9 266 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 30 266 3.8E-97 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VCLMA_RS10705 846867ab2a000fa203e5852480d63da9 266 SUPERFAMILY SSF111364 30 266 1.09E-82 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VCLMA_RS10705 846867ab2a000fa203e5852480d63da9 266 Gene3D G3DSA:2.40.230.20 23 266 1.9E-98 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VCLMA_RS02015 11ff0318dad85264279b7c581d96d350 479 SUPERFAMILY SSF53067 40 154 2.59E-15 T 22-04-2016 VCLMA_RS02015 11ff0318dad85264279b7c581d96d350 479 PIRSF PIRSF028153 1 479 2.6E-230 T 22-04-2016 IPR016871 MSHA biogenesis protein, MshI VCLMA_RS12125 01265cc85ed380966ae022f48678874e 326 Pfam PF01112 Asparaginase 6 323 3.6E-110 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VCLMA_RS12125 01265cc85ed380966ae022f48678874e 326 PANTHER PTHR10188 5 326 4.4E-136 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VCLMA_RS12125 01265cc85ed380966ae022f48678874e 326 SUPERFAMILY SSF56235 5 156 3.2E-97 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS12125 01265cc85ed380966ae022f48678874e 326 SUPERFAMILY SSF56235 188 322 3.2E-97 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS12125 01265cc85ed380966ae022f48678874e 326 PANTHER PTHR10188:SF24 5 326 4.4E-136 T 22-04-2016 VCLMA_RS00715 658d39470bce3259b493572cee1031cf 88 PANTHER PTHR38775 2 88 6.5E-30 T 22-04-2016 VCLMA_RS00715 658d39470bce3259b493572cee1031cf 88 Pfam PF06611 Protein of unknown function (DUF1145) 4 59 1.3E-17 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 VCLMA_RS00715 658d39470bce3259b493572cee1031cf 88 PANTHER PTHR38775:SF1 2 88 6.5E-30 T 22-04-2016 VCLMA_RS10310 7578b1dada4d4c7fded382d4ad81aae9 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 1.9E-15 T 22-04-2016 IPR021494 Protein of unknown function DUF3149 VCLMA_RS08350 34455b176bc14c18da4ab2514dda9255 467 SUPERFAMILY SSF52794 373 466 1.66E-30 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS08350 34455b176bc14c18da4ab2514dda9255 467 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 13 342 1.5E-76 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VCLMA_RS08350 34455b176bc14c18da4ab2514dda9255 467 Gene3D G3DSA:3.40.50.2300 369 466 7.2E-38 T 22-04-2016 VCLMA_RS08350 34455b176bc14c18da4ab2514dda9255 467 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 375 459 2.7E-32 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 VCLMA_RS08350 34455b176bc14c18da4ab2514dda9255 467 PANTHER PTHR30505:SF1 5 366 2.4E-143 T 22-04-2016 VCLMA_RS08350 34455b176bc14c18da4ab2514dda9255 467 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 376 466 5.1E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VCLMA_RS08350 34455b176bc14c18da4ab2514dda9255 467 PANTHER PTHR30505 5 366 2.4E-143 T 22-04-2016 VCLMA_RS03340 d3685b4355dd3a32443c3e2609cb0853 320 PANTHER PTHR30426 5 316 3.4E-158 T 22-04-2016 VCLMA_RS03340 d3685b4355dd3a32443c3e2609cb0853 320 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 5 292 37.967 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VCLMA_RS03340 d3685b4355dd3a32443c3e2609cb0853 320 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 6 290 3.0E-97 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VCLMA_RS03340 d3685b4355dd3a32443c3e2609cb0853 320 Pfam PF02401 LytB protein 7 288 2.4E-92 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 VCLMA_RS08650 da3f754272bb1969fb3d3cbfae69a3af 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 402 8.0E-132 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VCLMA_RS08650 da3f754272bb1969fb3d3cbfae69a3af 402 PANTHER PTHR30489:SF8 1 402 4.2E-227 T 22-04-2016 VCLMA_RS08650 da3f754272bb1969fb3d3cbfae69a3af 402 Pfam PF12704 MacB-like periplasmic core domain 29 204 8.2E-12 T 22-04-2016 IPR025857 MacB-like periplasmic core domain VCLMA_RS08650 da3f754272bb1969fb3d3cbfae69a3af 402 PANTHER PTHR30489 1 402 4.2E-227 T 22-04-2016 VCLMA_RS08650 da3f754272bb1969fb3d3cbfae69a3af 402 Pfam PF02687 FtsX-like permease family 271 395 9.3E-18 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 VCLMA_RS01220 eae0964c1a20b743bc20a1a89c94c531 65 Pfam PF13808 DDE_Tnp_1-associated 9 63 2.9E-16 T 22-04-2016 IPR032806 H repeat-associated protein, N-terminal VCLMA_RS08305 f06d912c501144e2512a69a23da5d4b8 67 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 6.9E-23 T 22-04-2016 IPR021677 Protein of unknown function DUF2986 VCLMA_RS01360 9fab467e5a0ee500ee9f8bc59920e5f8 225 Pfam PF16357 Putative PepSY_TM-like 33 219 2.9E-13 T 22-04-2016 IPR032307 Putative PepSY TM-like protein VCLMA_RS01360 9fab467e5a0ee500ee9f8bc59920e5f8 225 PANTHER PTHR40115 12 225 1.4E-64 T 22-04-2016 VCLMA_RS00880 53e2dc7a317732adf1c1cc797d0c139a 518 SUPERFAMILY SSF53850 26 516 3.34E-126 T 22-04-2016 VCLMA_RS00880 53e2dc7a317732adf1c1cc797d0c139a 518 Gene3D G3DSA:3.40.190.10 124 284 2.7E-42 T 22-04-2016 VCLMA_RS00880 53e2dc7a317732adf1c1cc797d0c139a 518 PANTHER PTHR30290:SF24 26 514 1.2E-221 T 22-04-2016 VCLMA_RS00880 53e2dc7a317732adf1c1cc797d0c139a 518 PIRSF PIRSF002741 21 501 1.9E-95 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VCLMA_RS00880 53e2dc7a317732adf1c1cc797d0c139a 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site VCLMA_RS00880 53e2dc7a317732adf1c1cc797d0c139a 518 Gene3D G3DSA:3.10.105.10 285 486 2.9E-56 T 22-04-2016 VCLMA_RS00880 53e2dc7a317732adf1c1cc797d0c139a 518 PANTHER PTHR30290 26 514 1.2E-221 T 22-04-2016 VCLMA_RS00880 53e2dc7a317732adf1c1cc797d0c139a 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 66 426 3.6E-90 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain VCLMA_RS10565 6ead3e8ff0c5588df67c18a070aee812 129 Pfam PF07417 Transcriptional regulator Crl 6 122 8.3E-49 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VCLMA_RS10565 6ead3e8ff0c5588df67c18a070aee812 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 2 129 30.383 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 VCLMA_RS11615 913ba9680e2f4bda2d33cf08a0ae3a86 157 PANTHER PTHR36115 1 155 4.4E-79 T 22-04-2016 VCLMA_RS11615 913ba9680e2f4bda2d33cf08a0ae3a86 157 PANTHER PTHR36115:SF2 1 155 4.4E-79 T 22-04-2016 VCLMA_RS11615 913ba9680e2f4bda2d33cf08a0ae3a86 157 Pfam PF06271 RDD family 8 147 9.5E-24 T 22-04-2016 IPR010432 RDD VCLMA_RS06480 69adcbd53dfd975e0a0e060fb227afbf 358 Pfam PF00990 Diguanylate cyclase, GGDEF domain 198 349 1.2E-40 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06480 69adcbd53dfd975e0a0e060fb227afbf 358 PANTHER PTHR10799:SF710 227 356 2.1E-26 T 22-04-2016 VCLMA_RS06480 69adcbd53dfd975e0a0e060fb227afbf 358 PANTHER PTHR10799:SF710 57 195 2.1E-26 T 22-04-2016 VCLMA_RS06480 69adcbd53dfd975e0a0e060fb227afbf 358 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 196 353 2.6E-41 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS06480 69adcbd53dfd975e0a0e060fb227afbf 358 PANTHER PTHR10799 227 356 2.1E-26 T 22-04-2016 VCLMA_RS06480 69adcbd53dfd975e0a0e060fb227afbf 358 PANTHER PTHR10799 57 195 2.1E-26 T 22-04-2016 VCLMA_RS06480 69adcbd53dfd975e0a0e060fb227afbf 358 SUPERFAMILY SSF55073 202 352 5.49E-42 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS06480 69adcbd53dfd975e0a0e060fb227afbf 358 Gene3D G3DSA:3.30.70.270 200 354 5.3E-48 T 22-04-2016 VCLMA_RS06480 69adcbd53dfd975e0a0e060fb227afbf 358 SMART SM00267 183 353 1.6E-42 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS01535 54d92d86f1a9a5a5a1d376cfc85df1f9 140 Pfam PF13508 Acetyltransferase (GNAT) domain 31 106 3.2E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS01535 54d92d86f1a9a5a5a1d376cfc85df1f9 140 Gene3D G3DSA:3.40.630.30 30 117 2.3E-13 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS01535 54d92d86f1a9a5a5a1d376cfc85df1f9 140 SUPERFAMILY SSF55729 3 114 9.91E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PANTHER PTHR30381 1 361 6.6E-226 T 22-04-2016 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 Hamap MF_00416 Flagellar P-ring protein [flgI]. 3 361 40.166 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 35 50 4.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 184 202 4.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 78 97 4.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 248 260 4.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 117 135 4.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 52 67 4.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 158 176 4.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 100 117 4.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PRINTS PR01010 Flagellar P-ring protein signature 20 35 4.7E-86 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 Pfam PF02119 Flagellar P-ring protein 20 360 5.5E-137 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VCLMA_RS10175 80b2adb53e7de5c5e9d9dc0e2fc2dcf3 361 PANTHER PTHR30381:SF1 1 361 6.6E-226 T 22-04-2016 VCLMA_RS09935 a140b86e80809498943ae86a0a559861 339 PIRSF PIRSF026343 4 339 5.7E-152 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC VCLMA_RS09935 a140b86e80809498943ae86a0a559861 339 Pfam PF06804 NlpB/DapX lipoprotein 35 335 1.2E-101 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein VCLMA_RS09935 a140b86e80809498943ae86a0a559861 339 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 36.733 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC VCLMA_RS05470 5af5c7c36fd388dec6bb5df3884ca6d0 245 PANTHER PTHR38037 29 244 1.4E-71 T 22-04-2016 VCLMA_RS05470 5af5c7c36fd388dec6bb5df3884ca6d0 245 Gene3D G3DSA:2.40.70.10 106 235 7.7E-49 T 22-04-2016 IPR021109 Aspartic peptidase domain VCLMA_RS05470 5af5c7c36fd388dec6bb5df3884ca6d0 245 SUPERFAMILY SSF50630 107 241 1.84E-42 T 22-04-2016 IPR021109 Aspartic peptidase domain VCLMA_RS05470 5af5c7c36fd388dec6bb5df3884ca6d0 245 Pfam PF05618 Putative ATP-dependant zinc protease 107 243 2.2E-51 T 22-04-2016 VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 Gene3D G3DSA:3.40.50.970 9 177 4.0E-58 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 SUPERFAMILY SSF52518 367 556 4.37E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 175 6.4E-48 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 10 548 9.1E-279 T 22-04-2016 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00626 VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 SUPERFAMILY SSF52467 186 353 7.48E-34 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 535 3.9E-39 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 PANTHER PTHR18968 8 556 1.0E-294 T 22-04-2016 VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 328 2.5E-25 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 SUPERFAMILY SSF52518 8 178 4.63E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 PANTHER PTHR18968:SF129 8 556 1.0E-294 T 22-04-2016 VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 Gene3D G3DSA:3.40.50.970 366 556 1.1E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold VCLMA_RS07370 15dc7fe370e777ddbdc15f5569cad08a 567 Gene3D G3DSA:3.40.50.1220 188 340 1.3E-32 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain VCLMA_RS08670 51fb87ae097b46d4543391e10f1627e3 691 Pfam PF16458 Beta-prism lectin 317 450 9.0E-36 T 22-04-2016 IPR032496 Hemolysin, beta-prism lectin VCLMA_RS08670 51fb87ae097b46d4543391e10f1627e3 691 ProSitePatterns PS00018 EF-hand calcium-binding domain. 63 75 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site VCLMA_RS08670 51fb87ae097b46d4543391e10f1627e3 691 SUPERFAMILY SSF69318 58 295 5.23E-21 T 22-04-2016 VCLMA_RS08670 51fb87ae097b46d4543391e10f1627e3 691 SUPERFAMILY SSF69318 529 665 2.3E-5 T 22-04-2016 VCLMA_RS06135 85553c6bf1384be252b49e975ac6e06a 453 PANTHER PTHR30182 1 453 0.0 T 22-04-2016 VCLMA_RS06135 85553c6bf1384be252b49e975ac6e06a 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.0E-230 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VCLMA_RS06135 85553c6bf1384be252b49e975ac6e06a 453 PANTHER PTHR30182:SF5 1 453 0.0 T 22-04-2016 VCLMA_RS06135 85553c6bf1384be252b49e975ac6e06a 453 Pfam PF03313 Serine dehydratase alpha chain 184 448 9.3E-99 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit VCLMA_RS06135 85553c6bf1384be252b49e975ac6e06a 453 Gene3D G3DSA:3.30.1330.90 10 158 8.4E-54 T 22-04-2016 IPR029009 Allosteric substrate binding domain VCLMA_RS06135 85553c6bf1384be252b49e975ac6e06a 453 Pfam PF03315 Serine dehydratase beta chain 3 155 1.2E-55 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 VCLMA_RS06135 85553c6bf1384be252b49e975ac6e06a 453 SUPERFAMILY SSF143548 16 158 2.04E-45 T 22-04-2016 IPR029009 Allosteric substrate binding domain VCLMA_RS04705 afdaed9aa8e90fd2663a1eb61ae1bae6 441 Pfam PF03553 Na+/H+ antiporter family 150 391 1.8E-55 T 22-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VCLMA_RS04705 afdaed9aa8e90fd2663a1eb61ae1bae6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 9.2E-7 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS04705 afdaed9aa8e90fd2663a1eb61ae1bae6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 9.2E-7 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 VCLMA_RS04705 afdaed9aa8e90fd2663a1eb61ae1bae6 441 PANTHER PTHR37821 1 391 5.0E-160 T 22-04-2016 VCLMA_RS04705 afdaed9aa8e90fd2663a1eb61ae1bae6 441 Pfam PF13726 Na+-H+ antiporter family 2 88 1.0E-35 T 22-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal VCLMA_RS08030 78f2b95dfce313880ac8957140ef2fcb 229 PANTHER PTHR12677 1 225 4.2E-51 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 VCLMA_RS08030 78f2b95dfce313880ac8957140ef2fcb 229 Pfam PF09335 SNARE associated Golgi protein 65 181 5.5E-24 T 22-04-2016 IPR032816 SNARE associated Golgi protein VCLMA_RS05085 017e94737faefe9a1cd90857b655556b 121 SUPERFAMILY SSF52172 4 118 1.11E-26 T 22-04-2016 IPR011006 CheY-like superfamily VCLMA_RS05085 017e94737faefe9a1cd90857b655556b 121 Gene3D G3DSA:3.40.50.2300 2 118 3.5E-26 T 22-04-2016 VCLMA_RS05085 017e94737faefe9a1cd90857b655556b 121 PANTHER PTHR26402:SF547 3 118 1.2E-33 T 22-04-2016 VCLMA_RS05085 017e94737faefe9a1cd90857b655556b 121 Pfam PF00072 Response regulator receiver domain 7 115 6.4E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05085 017e94737faefe9a1cd90857b655556b 121 SMART SM00448 3 115 1.2E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 VCLMA_RS05085 017e94737faefe9a1cd90857b655556b 121 PANTHER PTHR26402 3 118 1.2E-33 T 22-04-2016 VCLMA_RS10345 359c31644368d1c46b9bc8654e942e51 281 Pfam PF13230 Glutamine amidotransferases class-II 1 255 4.9E-114 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 VCLMA_RS10345 359c31644368d1c46b9bc8654e942e51 281 SUPERFAMILY SSF56235 2 253 1.16E-50 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS10345 359c31644368d1c46b9bc8654e942e51 281 PANTHER PTHR11907 1 257 4.5E-133 T 22-04-2016 VCLMA_RS10345 359c31644368d1c46b9bc8654e942e51 281 PANTHER PTHR11907:SF10 1 257 4.5E-133 T 22-04-2016 VCLMA_RS10345 359c31644368d1c46b9bc8654e942e51 281 Gene3D G3DSA:3.60.20.10 1 251 5.1E-69 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal VCLMA_RS10630 1eac70163121730354199d36cb8f7edf 334 PIRSF PIRSF006268 1 333 1.1E-97 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VCLMA_RS10630 1eac70163121730354199d36cb8f7edf 334 SUPERFAMILY SSF143631 23 332 1.96E-105 T 22-04-2016 IPR003374 ApbE-like domain VCLMA_RS10630 1eac70163121730354199d36cb8f7edf 334 Pfam PF02424 ApbE family 31 309 1.1E-87 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 VCLMA_RS10630 1eac70163121730354199d36cb8f7edf 334 PANTHER PTHR30040 1 334 1.3E-191 T 22-04-2016 VCLMA_RS10630 1eac70163121730354199d36cb8f7edf 334 PANTHER PTHR30040:SF3 1 334 1.3E-191 T 22-04-2016 VCLMA_RS10590 c49c3f283b39fc15e3a98a0c50aeb490 147 PANTHER PTHR38037 1 147 1.7E-61 T 22-04-2016 VCLMA_RS10590 c49c3f283b39fc15e3a98a0c50aeb490 147 SUPERFAMILY SSF50630 6 140 5.16E-46 T 22-04-2016 IPR021109 Aspartic peptidase domain VCLMA_RS10590 c49c3f283b39fc15e3a98a0c50aeb490 147 Pfam PF05618 Putative ATP-dependant zinc protease 6 141 2.1E-51 T 22-04-2016 VCLMA_RS10590 c49c3f283b39fc15e3a98a0c50aeb490 147 Gene3D G3DSA:2.40.70.10 3 134 8.5E-46 T 22-04-2016 IPR021109 Aspartic peptidase domain VCLMA_RS10900 c71b0ff35eef7dd24a8a7b51956e5f06 418 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 415 3.2E-152 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS10900 c71b0ff35eef7dd24a8a7b51956e5f06 418 Pfam PF07670 Nucleoside recognition 99 195 1.0E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS10900 c71b0ff35eef7dd24a8a7b51956e5f06 418 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 415 7.2E-75 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS10900 c71b0ff35eef7dd24a8a7b51956e5f06 418 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.2E-26 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS10900 c71b0ff35eef7dd24a8a7b51956e5f06 418 PANTHER PTHR10590 4 415 2.1E-218 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 VCLMA_RS09435 f459147f722da817896a1583f686e457 207 PRINTS PR01805 VacJ lipoprotein signature 10 26 3.32E-22 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VCLMA_RS09435 f459147f722da817896a1583f686e457 207 PRINTS PR01805 VacJ lipoprotein signature 98 115 3.32E-22 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VCLMA_RS09435 f459147f722da817896a1583f686e457 207 PRINTS PR01805 VacJ lipoprotein signature 61 78 3.32E-22 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VCLMA_RS09435 f459147f722da817896a1583f686e457 207 PANTHER PTHR30035 1 206 2.5E-100 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VCLMA_RS09435 f459147f722da817896a1583f686e457 207 Pfam PF04333 MlaA lipoprotein 1 182 5.0E-57 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 VCLMA_RS09435 f459147f722da817896a1583f686e457 207 PANTHER PTHR30035:SF3 1 206 2.5E-100 T 22-04-2016 VCLMA_RS07430 b6d9b06dedb52eed2492fe56e399e119 229 PIRSF PIRSF028063 1 221 3.4E-142 T 22-04-2016 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VCLMA_RS07430 b6d9b06dedb52eed2492fe56e399e119 229 Gene3D G3DSA:3.30.65.10 174 212 8.6E-5 T 22-04-2016 VCLMA_RS07430 b6d9b06dedb52eed2492fe56e399e119 229 Pfam PF10881 Protein of unknown function (DUF2726) 38 160 5.7E-35 T 22-04-2016 IPR024402 Domain of unknown function DUF2726 VCLMA_RS07935 ad24c6832c8fd39a6219bacdde9e25e6 132 PIRSF PIRSF007010 1 132 2.2E-63 T 22-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VCLMA_RS07935 ad24c6832c8fd39a6219bacdde9e25e6 132 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 131 5.6E-48 T 22-04-2016 IPR016502 Type II secretion system (T2SS) pilotin, S protein VCLMA_RS13835 511f38fff6b6ac8c6280104b067ea226 66 PANTHER PTHR24220 1 66 2.4E-32 T 22-04-2016 VCLMA_RS13835 511f38fff6b6ac8c6280104b067ea226 66 Gene3D G3DSA:3.40.50.300 2 65 1.3E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS13835 511f38fff6b6ac8c6280104b067ea226 66 Pfam PF00005 ABC transporter 2 50 1.2E-9 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VCLMA_RS13835 511f38fff6b6ac8c6280104b067ea226 66 SUPERFAMILY SSF52540 2 65 7.45E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS13835 511f38fff6b6ac8c6280104b067ea226 66 PANTHER PTHR24220:SF266 1 66 2.4E-32 T 22-04-2016 VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 PANTHER PTHR32432:SF3 1 337 1.4E-83 T 22-04-2016 VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 Pfam PF11104 Type IV pilus assembly protein PilM; 239 328 1.4E-13 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 Pfam PF11104 Type IV pilus assembly protein PilM; 8 222 1.8E-35 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 SUPERFAMILY SSF53067 5 165 6.91E-7 T 22-04-2016 VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 3 329 1.2E-130 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 PIRSF PIRSF019169 1 330 8.3E-89 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 Gene3D G3DSA:3.30.420.40 3 96 3.2E-4 T 22-04-2016 VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 SUPERFAMILY SSF53067 185 326 4.54E-6 T 22-04-2016 VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 PANTHER PTHR32432 1 337 1.4E-83 T 22-04-2016 VCLMA_RS12275 050c19575f99e27ba051fe5828518b04 338 Gene3D G3DSA:3.30.420.40 186 297 2.3E-4 T 22-04-2016 VCLMA_RS08315 07d283bb7465a0fa0b59f8a518d8cd9b 131 PANTHER PTHR34290 1 131 7.3E-41 T 22-04-2016 VCLMA_RS08315 07d283bb7465a0fa0b59f8a518d8cd9b 131 Pfam PF04134 Protein of unknown function, DUF393 8 116 1.9E-23 T 22-04-2016 IPR007263 Protein of unknown function DUF393 VCLMA_RS08310 cc345afcbf920919d890c2fde0917d9f 157 PANTHER PTHR35458 1 156 3.3E-67 T 22-04-2016 VCLMA_RS08310 cc345afcbf920919d890c2fde0917d9f 157 Gene3D G3DSA:3.40.50.1010 1 152 2.3E-49 T 22-04-2016 IPR029060 PIN domain-like VCLMA_RS08310 cc345afcbf920919d890c2fde0917d9f 157 Pfam PF01936 NYN domain 3 151 1.9E-40 T 22-04-2016 IPR021139 NYN domain, limkain-b1-type VCLMA_RS08310 cc345afcbf920919d890c2fde0917d9f 157 PANTHER PTHR35458:SF2 1 156 3.3E-67 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 SUPERFAMILY SSF81653 199 295 3.27E-20 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 398 404 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 529 6.4E-27 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 626 6.4E-27 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 396 410 6.4E-27 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 550 6.4E-27 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 591 610 6.4E-27 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 245 259 6.4E-27 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 Gene3D G3DSA:3.40.1110.10 410 520 6.1E-21 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 Gene3D G3DSA:2.70.150.10 149 296 2.9E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 Pfam PF00702 haloacid dehalogenase-like hydrolase 392 604 3.0E-39 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 SUPERFAMILY SSF81665 296 390 3.79E-20 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 SUPERFAMILY SSF81665 640 673 3.79E-20 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 SUPERFAMILY SSF81665 149 200 3.79E-20 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 169 672 7.6E-77 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 146 693 4.9E-172 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 Pfam PF00122 E1-E2 ATPase 167 387 1.7E-59 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PANTHER PTHR24093:SF126 21 694 3.9E-218 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 Gene3D G3DSA:3.40.50.1000 369 409 2.2E-43 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 Gene3D G3DSA:3.40.50.1000 521 659 2.2E-43 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PANTHER PTHR24093 21 694 3.9E-218 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 SUPERFAMILY SSF56784 394 414 1.12E-48 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 SUPERFAMILY SSF56784 453 691 1.12E-48 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 Gene3D G3DSA:3.30.70.100 21 73 7.7E-10 T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 SUPERFAMILY SSF55008 20 72 7.98E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 ProSitePatterns PS01229 Hypothetical cof family signature 2. 591 613 - T 22-04-2016 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PRINTS PR00941 Cadmium-transporting ATPase signature 280 294 1.6E-5 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PRINTS PR00941 Cadmium-transporting ATPase signature 22 43 1.6E-5 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 PRINTS PR00941 Cadmium-transporting ATPase signature 181 201 1.6E-5 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 VCLMA_RS04840 24bb22eb4e564a5a5388f9fcc7f4dbdc 702 Pfam PF00403 Heavy-metal-associated domain 20 69 5.4E-5 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VCLMA_RS03380 f8acd2a64393619702b90f310dc7792a 357 Pfam PF00793 DAHP synthetase I family 41 340 7.0E-105 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 VCLMA_RS03380 f8acd2a64393619702b90f310dc7792a 357 SUPERFAMILY SSF51569 8 345 1.28E-137 T 22-04-2016 VCLMA_RS03380 f8acd2a64393619702b90f310dc7792a 357 Gene3D G3DSA:3.20.20.70 10 347 1.2E-153 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS03380 f8acd2a64393619702b90f310dc7792a 357 PIRSF PIRSF001361 1 353 2.1E-163 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS03380 f8acd2a64393619702b90f310dc7792a 357 PANTHER PTHR21225:SF0 1 348 1.1E-223 T 22-04-2016 VCLMA_RS03380 f8acd2a64393619702b90f310dc7792a 357 PANTHER PTHR21225 1 348 1.1E-223 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS03380 f8acd2a64393619702b90f310dc7792a 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 347 8.6E-162 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 VCLMA_RS08525 29b19a44ba1c8e1973c4819ee7eb620b 70 Pfam PF10689 Protein of unknown function (DUF2496) 7 49 2.9E-24 T 22-04-2016 IPR019630 Protein of unknown function DUF2496, YbaM-related VCLMA_RS07355 ab71257382d7253c6a2515f134bacec5 146 PANTHER PTHR40106:SF1 1 145 1.4E-52 T 22-04-2016 VCLMA_RS07355 ab71257382d7253c6a2515f134bacec5 146 Pfam PF04224 Protein of unknown function, DUF417 1 145 1.4E-49 T 22-04-2016 IPR007339 Protein of unknown function DUF417 VCLMA_RS07355 ab71257382d7253c6a2515f134bacec5 146 PANTHER PTHR40106 1 145 1.4E-52 T 22-04-2016 VCLMA_RS07355 ab71257382d7253c6a2515f134bacec5 146 PIRSF PIRSF028065 1 146 1.6E-78 T 22-04-2016 IPR016865 Uncharacterised conserved protein UCP028065, membrane VCLMA_RS12155 f2c982e2d30ab257f8f0457b50073590 161 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 6.2E-27 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VCLMA_RS12155 f2c982e2d30ab257f8f0457b50073590 161 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 118 5.6E-33 T 22-04-2016 IPR012659 Conserved hypothetical protein CHP02444 VCLMA_RS06205 46c76ac9835e6d80d48d186b0aa0e7ea 470 PIRSF PIRSF002457 1 470 1.4E-107 T 22-04-2016 IPR030676 Citrate carrier CitT-related VCLMA_RS06205 46c76ac9835e6d80d48d186b0aa0e7ea 470 Pfam PF00939 Sodium:sulfate symporter transmembrane region 5 462 6.5E-48 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS06205 46c76ac9835e6d80d48d186b0aa0e7ea 470 PANTHER PTHR10283:SF92 1 69 7.2E-147 T 22-04-2016 VCLMA_RS06205 46c76ac9835e6d80d48d186b0aa0e7ea 470 PANTHER PTHR10283:SF92 89 468 7.2E-147 T 22-04-2016 VCLMA_RS06205 46c76ac9835e6d80d48d186b0aa0e7ea 470 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 462 2.9E-76 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS06205 46c76ac9835e6d80d48d186b0aa0e7ea 470 PANTHER PTHR10283 1 69 7.2E-147 T 22-04-2016 VCLMA_RS06205 46c76ac9835e6d80d48d186b0aa0e7ea 470 PANTHER PTHR10283 89 468 7.2E-147 T 22-04-2016 VCLMA_RS09415 c0fd96101373153a6b0c56b916aab007 110 PIRSF PIRSF005894 1 107 1.3E-51 T 22-04-2016 IPR014434 Monothiol glutaredoxin VCLMA_RS09415 c0fd96101373153a6b0c56b916aab007 110 Pfam PF00462 Glutaredoxin 16 80 2.6E-16 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VCLMA_RS09415 c0fd96101373153a6b0c56b916aab007 110 SUPERFAMILY SSF52833 1 104 3.57E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS09415 c0fd96101373153a6b0c56b916aab007 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.1E-46 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related VCLMA_RS09415 c0fd96101373153a6b0c56b916aab007 110 PANTHER PTHR10293 1 110 2.6E-58 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related VCLMA_RS09415 c0fd96101373153a6b0c56b916aab007 110 Gene3D G3DSA:3.40.30.10 7 102 1.8E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS01720 158cf2a78fd1501efff94daf250bd279 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 1.0E-51 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VCLMA_RS01720 158cf2a78fd1501efff94daf250bd279 154 SUPERFAMILY SSF52540 27 134 6.23E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01720 158cf2a78fd1501efff94daf250bd279 154 PANTHER PTHR33540 1 152 2.7E-56 T 22-04-2016 VCLMA_RS01720 158cf2a78fd1501efff94daf250bd279 154 PANTHER PTHR33540:SF2 1 152 2.7E-56 T 22-04-2016 VCLMA_RS01720 158cf2a78fd1501efff94daf250bd279 154 Gene3D G3DSA:3.40.50.300 5 151 2.6E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS01720 158cf2a78fd1501efff94daf250bd279 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 1.3E-41 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VCLMA_RS15740 fe651b267ebb4d9bc86834bb88d7942a 105 SUPERFAMILY SSF51621 1 104 2.76E-39 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS15740 fe651b267ebb4d9bc86834bb88d7942a 105 PANTHER PTHR20881 1 105 2.0E-69 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS15740 fe651b267ebb4d9bc86834bb88d7942a 105 Pfam PF02548 Ketopantoate hydroxymethyltransferase 1 104 1.4E-40 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 VCLMA_RS15740 fe651b267ebb4d9bc86834bb88d7942a 105 PANTHER PTHR20881:SF3 1 105 2.0E-69 T 22-04-2016 VCLMA_RS15740 fe651b267ebb4d9bc86834bb88d7942a 105 Gene3D G3DSA:3.20.20.60 1 104 1.4E-40 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 VCLMA_RS08890 d799990def6024004b494083574aa09f 230 Pfam PF01066 CDP-alcohol phosphatidyltransferase 34 105 1.5E-8 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VCLMA_RS12410 08533a8f57f1067b8834a51228829014 205 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 46 2.8E-7 T 22-04-2016 VCLMA_RS12410 08533a8f57f1067b8834a51228829014 205 PANTHER PTHR30363 1 205 8.5E-121 T 22-04-2016 VCLMA_RS12410 08533a8f57f1067b8834a51228829014 205 PANTHER PTHR30363:SF9 1 205 8.5E-121 T 22-04-2016 VCLMA_RS12410 08533a8f57f1067b8834a51228829014 205 SUPERFAMILY SSF46785 4 183 2.41E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS12410 08533a8f57f1067b8834a51228829014 205 Gene3D G3DSA:1.10.10.10 6 98 2.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain VCLMA_RS05685 58841e433481c08fa24eb50cb6775dbf 315 SUPERFAMILY SSF56935 154 281 2.38E-5 T 22-04-2016 VCLMA_RS05685 58841e433481c08fa24eb50cb6775dbf 315 SUPERFAMILY SSF56935 26 117 2.38E-5 T 22-04-2016 VCLMA_RS05685 58841e433481c08fa24eb50cb6775dbf 315 Pfam PF11383 Protein of unknown function (DUF3187) 4 314 3.5E-126 T 22-04-2016 IPR021523 Protein of unknown function DUF3187 VCLMA_RS03035 75d5f6ebf758b27c9d4bdc4f7dd809bc 361 PANTHER PTHR21716 1 361 7.0E-115 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VCLMA_RS03035 75d5f6ebf758b27c9d4bdc4f7dd809bc 361 Pfam PF01594 Domain of unknown function DUF20 14 347 4.9E-56 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like VCLMA_RS03035 75d5f6ebf758b27c9d4bdc4f7dd809bc 361 PANTHER PTHR21716:SF13 1 361 7.0E-115 T 22-04-2016 VCLMA_RS10700 21ef275878d4915a8f1e6da876e52c39 194 SMART SM00464 3 190 0.0032 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VCLMA_RS10700 21ef275878d4915a8f1e6da876e52c39 194 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 115 4.6E-14 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 VCLMA_RS10700 21ef275878d4915a8f1e6da876e52c39 194 SUPERFAMILY SSF88697 3 189 7.46E-46 T 22-04-2016 IPR015947 PUA-like domain VCLMA_RS05180 f652dbfd30838f7f616fa6ca91937da8 314 PANTHER PTHR32196 1 305 4.0E-149 T 22-04-2016 VCLMA_RS05180 f652dbfd30838f7f616fa6ca91937da8 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 265 5.2E-27 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 VCLMA_RS05180 f652dbfd30838f7f616fa6ca91937da8 314 PANTHER PTHR32196:SF27 1 305 4.0E-149 T 22-04-2016 VCLMA_RS10740 c928cab5807f7ccd51181a142e55a2f0 134 Pfam PF11012 Protein of unknown function (DUF2850) 48 125 2.2E-29 T 22-04-2016 IPR021271 Protein of unknown function DUF2850 VCLMA_RS09350 135d1e94b17dc0ed9539e1a118ef5056 291 PANTHER PTHR22911:SF65 1 290 2.2E-141 T 22-04-2016 VCLMA_RS09350 135d1e94b17dc0ed9539e1a118ef5056 291 Pfam PF00892 EamA-like transporter family 2 139 2.5E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS09350 135d1e94b17dc0ed9539e1a118ef5056 291 SUPERFAMILY SSF103481 194 290 5.43E-9 T 22-04-2016 VCLMA_RS09350 135d1e94b17dc0ed9539e1a118ef5056 291 SUPERFAMILY SSF103481 41 143 3.27E-8 T 22-04-2016 VCLMA_RS09350 135d1e94b17dc0ed9539e1a118ef5056 291 PANTHER PTHR22911 1 290 2.2E-141 T 22-04-2016 VCLMA_RS10240 e15f36ee18d7103fba08614f608c9400 144 PIRSF PIRSF028687 1 144 6.3E-62 T 22-04-2016 IPR007293 Flagellar protein FlgP VCLMA_RS10240 e15f36ee18d7103fba08614f608c9400 144 Pfam PF02169 LPP20 lipoprotein 28 119 3.2E-9 T 22-04-2016 IPR024952 Lipoprotein LPP20-like VCLMA_RS01115 f062d327d378b0b79d5322d18feacc25 126 TIGRFAM TIGR01689 EcbF-BcbF: capsule biosynthesis phosphatase 1 126 3.6E-69 T 22-04-2016 IPR010039 Capsule biosynthesis phosphatase VCLMA_RS01115 f062d327d378b0b79d5322d18feacc25 126 SUPERFAMILY SSF56784 1 108 1.57E-26 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS01115 f062d327d378b0b79d5322d18feacc25 126 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 70 3.7E-6 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS01115 f062d327d378b0b79d5322d18feacc25 126 TIGRFAM TIGR01681 HAD-SF-IIIC: HAD phosphatase, family IIIC 4 108 1.9E-9 T 22-04-2016 IPR010033 HAD-superfamily phosphatase, subfamily IIIC VCLMA_RS01115 f062d327d378b0b79d5322d18feacc25 126 Gene3D G3DSA:3.40.50.1000 1 124 8.1E-45 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS01320 4ba181ba84a6614bab98e972d253edee 229 Pfam PF07356 Protein of unknown function (DUF1481) 33 226 6.8E-58 T 22-04-2016 IPR010858 Protein of unknown function DUF1481 VCLMA_RS01320 4ba181ba84a6614bab98e972d253edee 229 PIRSF PIRSF028160 1 229 2.8E-123 T 22-04-2016 IPR016872 Uncharacterised conserved protein UCP028160 VCLMA_RS02990 5eefd496502765bcf12b1c3fe451aa78 574 Pfam PF00759 Glycosyl hydrolase family 9 100 503 4.8E-22 T 22-04-2016 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VCLMA_RS02990 5eefd496502765bcf12b1c3fe451aa78 574 SUPERFAMILY SSF48208 78 564 2.87E-93 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 VCLMA_RS02990 5eefd496502765bcf12b1c3fe451aa78 574 Gene3D G3DSA:2.60.40.10 5 91 4.1E-20 T 22-04-2016 IPR013783 Immunoglobulin-like fold VCLMA_RS02990 5eefd496502765bcf12b1c3fe451aa78 574 SUPERFAMILY SSF81296 2 91 4.27E-17 T 22-04-2016 IPR014756 Immunoglobulin E-set VCLMA_RS02990 5eefd496502765bcf12b1c3fe451aa78 574 Gene3D G3DSA:1.50.10.10 109 560 5.5E-75 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 VCLMA_RS02990 5eefd496502765bcf12b1c3fe451aa78 574 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 1.2E-11 T 22-04-2016 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VCLMA_RS05135 8c0b124cac394be453be3f3badf68fb3 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 73 4.5E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VCLMA_RS05135 8c0b124cac394be453be3f3badf68fb3 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 298 1.9E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS05135 8c0b124cac394be453be3f3badf68fb3 300 Gene3D G3DSA:1.10.3720.10 96 297 2.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS05135 8c0b124cac394be453be3f3badf68fb3 300 PANTHER PTHR30465:SF9 17 300 6.8E-146 T 22-04-2016 VCLMA_RS05135 8c0b124cac394be453be3f3badf68fb3 300 SUPERFAMILY SSF161098 96 281 3.01E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 VCLMA_RS05135 8c0b124cac394be453be3f3badf68fb3 300 PANTHER PTHR30465 17 300 6.8E-146 T 22-04-2016 VCLMA_RS11850 a89ae265f621b8b36fd8a5700cd9b17e 1254 PANTHER PTHR36985 1 1254 0.0 T 22-04-2016 VCLMA_RS11850 a89ae265f621b8b36fd8a5700cd9b17e 1254 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 917 1253 4.0E-62 T 22-04-2016 IPR007452 Translocation and assembly module TamB VCLMA_RS03205 2e0d29be14a66d92b0b12554697f395c 135 PIRSF PIRSF029225 1 133 9.3E-46 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS03205 2e0d29be14a66d92b0b12554697f395c 135 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 127 4.0E-5 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS03205 2e0d29be14a66d92b0b12554697f395c 135 Gene3D G3DSA:3.40.50.10220 33 131 2.3E-35 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS03205 2e0d29be14a66d92b0b12554697f395c 135 SUPERFAMILY SSF102220 30 131 1.44E-29 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS03205 2e0d29be14a66d92b0b12554697f395c 135 Pfam PF03603 DNA polymerase III psi subunit 4 128 2.8E-33 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VCLMA_RS05700 327e4ccc947bbb172080e6e231343b78 255 SUPERFAMILY SSF81301 36 101 8.72E-8 T 22-04-2016 VCLMA_RS05700 327e4ccc947bbb172080e6e231343b78 255 Gene3D G3DSA:3.30.460.10 35 124 3.1E-11 T 22-04-2016 VCLMA_RS05700 327e4ccc947bbb172080e6e231343b78 255 Pfam PF01909 Nucleotidyltransferase domain 37 82 1.6E-5 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VCLMA_RS07110 404026ad4cfb65de3a173b48332d0a0c 263 PANTHER PTHR11863:SF2 67 263 8.9E-43 T 22-04-2016 VCLMA_RS07110 404026ad4cfb65de3a173b48332d0a0c 263 PANTHER PTHR11863:SF2 1 22 8.9E-43 T 22-04-2016 VCLMA_RS07110 404026ad4cfb65de3a173b48332d0a0c 263 PANTHER PTHR11863 67 263 8.9E-43 T 22-04-2016 VCLMA_RS07110 404026ad4cfb65de3a173b48332d0a0c 263 PANTHER PTHR11863 1 22 8.9E-43 T 22-04-2016 VCLMA_RS07110 404026ad4cfb65de3a173b48332d0a0c 263 Pfam PF04116 Fatty acid hydroxylase superfamily 89 225 1.4E-25 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 VCLMA_RS08515 89febaf78393a21977835306cd3e9e30 258 Pfam PF01925 Sulfite exporter TauE/SafE 12 249 1.3E-47 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VCLMA_RS08515 89febaf78393a21977835306cd3e9e30 258 PANTHER PTHR30269 4 258 1.5E-175 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 VCLMA_RS08515 89febaf78393a21977835306cd3e9e30 258 PANTHER PTHR30269:SF25 4 258 1.5E-175 T 22-04-2016 VCLMA_RS07635 90a8a1b597320a831b84c5d0d7926c03 133 Pfam PF12614 Ribosome recycling factor 6 130 8.7E-55 T 22-04-2016 IPR022253 Ribosome recycling factor. bacterial VCLMA_RS08300 706816c2b299d06ab2e9c36bb41b8a8d 66 PANTHER PTHR36154 1 66 1.2E-16 T 22-04-2016 VCLMA_RS08300 706816c2b299d06ab2e9c36bb41b8a8d 66 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 56 3.8E-22 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) VCLMA_RS08300 706816c2b299d06ab2e9c36bb41b8a8d 66 SUPERFAMILY SSF46955 7 59 3.66E-6 T 22-04-2016 IPR009061 Putative DNA-binding domain VCLMA_RS09790 fefa2a43bd503713fe2e373fa23e1cd9 129 PANTHER PTHR38766 1 129 8.2E-43 T 22-04-2016 VCLMA_RS09790 fefa2a43bd503713fe2e373fa23e1cd9 129 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 31 98 7.3E-23 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VCLMA_RS09790 fefa2a43bd503713fe2e373fa23e1cd9 129 PANTHER PTHR38766:SF1 1 129 8.2E-43 T 22-04-2016 VCLMA_RS09790 fefa2a43bd503713fe2e373fa23e1cd9 129 Pfam PF04347 Flagellar biosynthesis protein, FliO 43 121 4.3E-19 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VCLMA_RS04940 c4399bef67b2287f29130490c607d625 132 Pfam PF04304 Protein of unknown function (DUF454) 7 121 3.6E-38 T 22-04-2016 IPR007401 Protein of unknown function DUF454 VCLMA_RS04940 c4399bef67b2287f29130490c607d625 132 PANTHER PTHR35813:SF1 1 129 6.1E-50 T 22-04-2016 VCLMA_RS04940 c4399bef67b2287f29130490c607d625 132 PANTHER PTHR35813 1 129 6.1E-50 T 22-04-2016 VCLMA_RS04940 c4399bef67b2287f29130490c607d625 132 PIRSF PIRSF016789 6 127 2.6E-50 T 22-04-2016 IPR007401 Protein of unknown function DUF454 VCLMA_RS10820 19b3b6d491f0b366c06ab4a308f7401e 114 Pfam PF01588 Putative tRNA binding domain 18 110 4.6E-21 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 VCLMA_RS10820 19b3b6d491f0b366c06ab4a308f7401e 114 Gene3D G3DSA:2.40.50.140 8 113 1.1E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS10820 19b3b6d491f0b366c06ab4a308f7401e 114 SUPERFAMILY SSF50249 11 113 2.69E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold VCLMA_RS10820 19b3b6d491f0b366c06ab4a308f7401e 114 PANTHER PTHR11586 7 114 1.8E-74 T 22-04-2016 VCLMA_RS10820 19b3b6d491f0b366c06ab4a308f7401e 114 PANTHER PTHR11586:SF19 7 114 1.8E-74 T 22-04-2016 VCLMA_RS04320 877d9bc9bb76ed6c3a504e21b1dceba6 368 Pfam PF00501 AMP-binding enzyme 115 274 3.2E-5 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 VCLMA_RS04320 877d9bc9bb76ed6c3a504e21b1dceba6 368 PANTHER PTHR36932 12 368 4.7E-149 T 22-04-2016 VCLMA_RS04320 877d9bc9bb76ed6c3a504e21b1dceba6 368 PANTHER PTHR36932:SF2 12 368 4.7E-149 T 22-04-2016 VCLMA_RS04320 877d9bc9bb76ed6c3a504e21b1dceba6 368 Gene3D G3DSA:3.40.50.980 116 271 1.1E-7 T 22-04-2016 VCLMA_RS04320 877d9bc9bb76ed6c3a504e21b1dceba6 368 SUPERFAMILY SSF56801 97 360 1.31E-16 T 22-04-2016 VCLMA_RS07590 a02efd02d9077d8bdd29cf3f8ab80c47 219 Pfam PF11140 Protein of unknown function (DUF2913) 3 213 1.1E-87 T 22-04-2016 IPR021316 Protein of unknown function DUF2913 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 388 408 9.0E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 257 277 9.0E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 9.0E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 9.0E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 9.0E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 9.0E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 9.0E-36 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 PANTHER PTHR11616:SF11 1 473 4.3E-189 T 22-04-2016 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 SUPERFAMILY SSF161070 3 471 6.28E-150 T 22-04-2016 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 Pfam PF00209 Sodium:neurotransmitter symporter family 121 467 2.2E-79 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS09250 c83725ca71e485daa883dff5562dad49 486 PANTHER PTHR11616 1 473 4.3E-189 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS00640 8d80c3124617f998afdbfbd56d713e97 239 Gene3D G3DSA:3.40.50.1000 10 235 3.3E-31 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS00640 8d80c3124617f998afdbfbd56d713e97 239 PANTHER PTHR12725 1 239 3.2E-77 T 22-04-2016 VCLMA_RS00640 8d80c3124617f998afdbfbd56d713e97 239 PANTHER PTHR12725:SF65 1 239 3.2E-77 T 22-04-2016 VCLMA_RS00640 8d80c3124617f998afdbfbd56d713e97 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 196 209 2.0E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS00640 8d80c3124617f998afdbfbd56d713e97 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 166 2.0E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS00640 8d80c3124617f998afdbfbd56d713e97 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 2.0E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS00640 8d80c3124617f998afdbfbd56d713e97 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 97 199 5.9E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 VCLMA_RS00640 8d80c3124617f998afdbfbd56d713e97 239 SUPERFAMILY SSF56784 10 236 1.29E-39 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS00640 8d80c3124617f998afdbfbd56d713e97 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 1.6E-14 T 22-04-2016 IPR023214 HAD-like domain VCLMA_RS11840 a89a3cb4f2ce3f706c2b387c8fb81383 176 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.8E-51 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VCLMA_RS11840 a89a3cb4f2ce3f706c2b387c8fb81383 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VCLMA_RS11840 a89a3cb4f2ce3f706c2b387c8fb81383 176 Gene3D G3DSA:3.90.80.10 4 175 8.1E-59 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VCLMA_RS11840 a89a3cb4f2ce3f706c2b387c8fb81383 176 SUPERFAMILY SSF50324 3 174 1.96E-65 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VCLMA_RS11840 a89a3cb4f2ce3f706c2b387c8fb81383 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.05 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VCLMA_RS11840 a89a3cb4f2ce3f706c2b387c8fb81383 176 PANTHER PTHR10286 5 172 1.4E-76 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 VCLMA_RS11875 cedd70df0873cea691c3679763697936 242 Pfam PF10986 Protein of unknown function (DUF2796) 147 238 1.7E-19 T 22-04-2016 IPR021253 Protein of unknown function DUF2796 VCLMA_RS11875 cedd70df0873cea691c3679763697936 242 Pfam PF10986 Protein of unknown function (DUF2796) 33 149 2.0E-28 T 22-04-2016 IPR021253 Protein of unknown function DUF2796 VCLMA_RS06535 987e807306983d7daa363015a5352007 160 Gene3D G3DSA:2.40.160.20 6 159 9.2E-18 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VCLMA_RS06535 987e807306983d7daa363015a5352007 160 Pfam PF13505 Outer membrane protein beta-barrel domain 6 159 1.7E-14 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel VCLMA_RS06535 987e807306983d7daa363015a5352007 160 SUPERFAMILY SSF56925 17 159 2.15E-20 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 VCLMA_RS06430 368488b0f7b52fe84c5b6e5ae048a589 342 SMART SM00062 38 267 1.7E-54 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS06430 368488b0f7b52fe84c5b6e5ae048a589 342 Gene3D G3DSA:3.40.190.10 129 207 2.4E-13 T 22-04-2016 VCLMA_RS06430 368488b0f7b52fe84c5b6e5ae048a589 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 6.7E-30 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VCLMA_RS06430 368488b0f7b52fe84c5b6e5ae048a589 342 PANTHER PTHR30085:SF5 8 311 3.7E-196 T 22-04-2016 VCLMA_RS06430 368488b0f7b52fe84c5b6e5ae048a589 342 SUPERFAMILY SSF53850 29 261 2.94E-49 T 22-04-2016 VCLMA_RS06430 368488b0f7b52fe84c5b6e5ae048a589 342 Gene3D G3DSA:3.40.190.10 227 257 9.7E-17 T 22-04-2016 VCLMA_RS06430 368488b0f7b52fe84c5b6e5ae048a589 342 Gene3D G3DSA:3.40.190.10 37 128 9.7E-17 T 22-04-2016 VCLMA_RS06430 368488b0f7b52fe84c5b6e5ae048a589 342 PANTHER PTHR30085 8 311 3.7E-196 T 22-04-2016 VCLMA_RS00675 a3a1653f5370202f0a05c648bfc84829 205 Pfam PF01810 LysE type translocator 15 202 5.6E-34 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS00675 a3a1653f5370202f0a05c648bfc84829 205 PANTHER PTHR30086:SF14 1 205 1.7E-111 T 22-04-2016 VCLMA_RS00675 a3a1653f5370202f0a05c648bfc84829 205 PANTHER PTHR30086 1 205 1.7E-111 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS00675 a3a1653f5370202f0a05c648bfc84829 205 PIRSF PIRSF006324 1 205 1.0E-56 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS10605 f6c1da52d76f67984b0799b5ea57ef0a 451 PANTHER PTHR11616:SF167 3 450 2.1E-178 T 22-04-2016 VCLMA_RS10605 f6c1da52d76f67984b0799b5ea57ef0a 451 PANTHER PTHR11616 3 450 2.1E-178 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS10605 f6c1da52d76f67984b0799b5ea57ef0a 451 Pfam PF00209 Sodium:neurotransmitter symporter family 7 132 3.3E-22 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS10605 f6c1da52d76f67984b0799b5ea57ef0a 451 Pfam PF00209 Sodium:neurotransmitter symporter family 151 449 3.5E-26 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS10605 f6c1da52d76f67984b0799b5ea57ef0a 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 311 330 3.2E-10 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS10605 f6c1da52d76f67984b0799b5ea57ef0a 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 3.2E-10 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS10605 f6c1da52d76f67984b0799b5ea57ef0a 451 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 3.2E-10 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VCLMA_RS10605 f6c1da52d76f67984b0799b5ea57ef0a 451 SUPERFAMILY SSF161070 7 450 2.22E-118 T 22-04-2016 VCLMA_RS07180 9a8cc023729cf5d10250c9a23df42404 252 PIRSF PIRSF028069 1 252 2.8E-108 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VCLMA_RS07180 9a8cc023729cf5d10250c9a23df42404 252 Pfam PF11932 Protein of unknown function (DUF3450) 5 245 1.1E-87 T 22-04-2016 IPR016866 Uncharacterised conserved protein UCP028069 VCLMA_RS10685 03e1667821b3f3b84fa91bc55082a1f3 436 Gene3D G3DSA:1.20.1250.20 3 198 1.8E-14 T 22-04-2016 VCLMA_RS10685 03e1667821b3f3b84fa91bc55082a1f3 436 Gene3D G3DSA:1.20.1250.20 230 426 1.2E-17 T 22-04-2016 VCLMA_RS10685 03e1667821b3f3b84fa91bc55082a1f3 436 SUPERFAMILY SSF103473 3 427 5.62E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS10685 03e1667821b3f3b84fa91bc55082a1f3 436 Pfam PF07690 Major Facilitator Superfamily 2 263 1.0E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS10685 03e1667821b3f3b84fa91bc55082a1f3 436 PANTHER PTHR12778 1 411 1.4E-89 T 22-04-2016 VCLMA_RS01600 c71d8d323568f3585c8f87f14d127938 162 PANTHER PTHR11560 1 162 9.4E-55 T 22-04-2016 VCLMA_RS01600 c71d8d323568f3585c8f87f14d127938 162 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS01600 c71d8d323568f3585c8f87f14d127938 162 Pfam PF00466 Ribosomal protein L10 5 101 2.3E-26 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VCLMA_RS01600 c71d8d323568f3585c8f87f14d127938 162 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.936 T 22-04-2016 IPR022973 Ribosomal protein L10 VCLMA_RS01600 c71d8d323568f3585c8f87f14d127938 162 SUPERFAMILY SSF160369 4 158 4.71E-44 T 22-04-2016 VCLMA_RS11925 d5b13256847a55842c6d038541eb7d26 189 PANTHER PTHR24567:SF33 15 188 4.6E-16 T 22-04-2016 VCLMA_RS11925 d5b13256847a55842c6d038541eb7d26 189 SUPERFAMILY SSF51206 15 137 3.54E-15 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like VCLMA_RS11925 d5b13256847a55842c6d038541eb7d26 189 PANTHER PTHR24567 15 188 4.6E-16 T 22-04-2016 VCLMA_RS11925 d5b13256847a55842c6d038541eb7d26 189 Gene3D G3DSA:2.60.120.10 10 150 7.3E-23 T 22-04-2016 IPR014710 RmlC-like jelly roll fold VCLMA_RS08445 5e7dd670e82ead93f0c01a122c8ecdb5 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 22-04-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545|UniPathway: UPA00705 VCLMA_RS08445 5e7dd670e82ead93f0c01a122c8ecdb5 35 Pfam PF08173 Membrane bound YbgT-like protein 1 26 2.2E-17 T 22-04-2016 IPR012994 Membrane bound YbgT-like VCLMA_RS01780 f0faf4bd12a5a85c25e51641590ba907 240 Pfam PF13309 HTH domain 174 231 1.6E-17 T 22-04-2016 VCLMA_RS01780 f0faf4bd12a5a85c25e51641590ba907 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 8.0E-62 T 22-04-2016 IPR013559 YheO-like VCLMA_RS01780 f0faf4bd12a5a85c25e51641590ba907 240 PANTHER PTHR35568:SF3 14 240 1.8E-172 T 22-04-2016 VCLMA_RS01780 f0faf4bd12a5a85c25e51641590ba907 240 PANTHER PTHR35568 14 240 1.8E-172 T 22-04-2016 VCLMA_RS01780 f0faf4bd12a5a85c25e51641590ba907 240 Pfam PF08348 YheO-like PAS domain 31 139 8.7E-35 T 22-04-2016 IPR013559 YheO-like VCLMA_RS07730 bf2b6254c3c6461016d4de84096ad008 88 PANTHER PTHR35175:SF1 1 78 5.4E-47 T 22-04-2016 VCLMA_RS07730 bf2b6254c3c6461016d4de84096ad008 88 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 3.4E-19 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 VCLMA_RS07730 bf2b6254c3c6461016d4de84096ad008 88 PANTHER PTHR35175 1 78 5.4E-47 T 22-04-2016 VCLMA_RS10525 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 Gene3D G3DSA:1.10.940.10 6 154 1.1E-42 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VCLMA_RS10525 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 Pfam PF01029 NusB family 11 149 1.0E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VCLMA_RS10525 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 3.6E-42 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 VCLMA_RS10525 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 SUPERFAMILY SSF48013 7 153 8.37E-39 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VCLMA_RS10525 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 8 153 23.052 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 VCLMA_RS10525 0f7fc45c4e96b5396f8a4d56f6df1f3b 156 PANTHER PTHR11078 5 156 3.4E-47 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 VCLMA_RS07475 d186a7330b0b3c0fd36688debfae33c9 382 PANTHER PTHR30294:SF19 1 382 3.1E-198 T 22-04-2016 VCLMA_RS07475 d186a7330b0b3c0fd36688debfae33c9 382 Pfam PF12698 ABC-2 family transporter protein 16 353 1.1E-39 T 22-04-2016 VCLMA_RS07475 d186a7330b0b3c0fd36688debfae33c9 382 PANTHER PTHR30294 1 382 3.1E-198 T 22-04-2016 VCLMA_RS05825 4d31ad3950615090d522a12ee2c43683 474 Gene3D G3DSA:3.30.420.10 2 197 4.0E-83 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS05825 4d31ad3950615090d522a12ee2c43683 474 SUPERFAMILY SSF53098 7 472 9.66E-135 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS05825 4d31ad3950615090d522a12ee2c43683 474 PANTHER PTHR11046 1 473 2.9E-296 T 22-04-2016 VCLMA_RS05825 4d31ad3950615090d522a12ee2c43683 474 PIRSF PIRSF000977 1 474 1.2E-199 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VCLMA_RS05825 4d31ad3950615090d522a12ee2c43683 474 Pfam PF08411 Exonuclease C-terminal 210 470 1.2E-104 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 VCLMA_RS05825 4d31ad3950615090d522a12ee2c43683 474 PANTHER PTHR11046:SF2 1 473 2.9E-296 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 VCLMA_RS05825 4d31ad3950615090d522a12ee2c43683 474 Pfam PF00929 Exonuclease 11 191 1.3E-23 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III VCLMA_RS05380 fa8a9484cb4fb767db6e4013fc055489 106 PANTHER PTHR33473 1 106 1.3E-44 T 22-04-2016 VCLMA_RS05380 fa8a9484cb4fb767db6e4013fc055489 106 SUPERFAMILY SSF54736 22 105 4.29E-32 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VCLMA_RS05380 fa8a9484cb4fb767db6e4013fc055489 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 9 101 27.773 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VCLMA_RS05380 fa8a9484cb4fb767db6e4013fc055489 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 3.0E-33 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 VCLMA_RS05380 fa8a9484cb4fb767db6e4013fc055489 106 Gene3D G3DSA:3.30.1390.10 4 106 5.2E-44 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VCLMA_RS05820 923a95a878138b887948f4c8b1862f61 124 PANTHER PTHR33931 1 121 2.1E-40 T 22-04-2016 VCLMA_RS05820 923a95a878138b887948f4c8b1862f61 124 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 1 120 22.296 T 22-04-2016 IPR022957 Uncharacterised protein family UPF0299 VCLMA_RS05820 923a95a878138b887948f4c8b1862f61 124 PANTHER PTHR33931:SF2 1 121 2.1E-40 T 22-04-2016 VCLMA_RS05820 923a95a878138b887948f4c8b1862f61 124 Pfam PF03788 LrgA family 20 111 1.1E-23 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 VCLMA_RS00815 7c14b1369818e37106377357cd2d3db5 83 Pfam PF04380 Membrane fusogenic activity 1 78 3.5E-27 T 22-04-2016 IPR007475 Membrane fusogenic activity VCLMA_RS00815 7c14b1369818e37106377357cd2d3db5 83 PANTHER PTHR38040:SF1 2 82 1.4E-37 T 22-04-2016 VCLMA_RS00815 7c14b1369818e37106377357cd2d3db5 83 PANTHER PTHR38040 2 82 1.4E-37 T 22-04-2016 VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 PANTHER PTHR10799:SF728 307 431 6.5E-24 T 22-04-2016 VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 PANTHER PTHR10799:SF728 160 167 6.5E-24 T 22-04-2016 VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 SUPERFAMILY SSF49785 40 211 4.85E-10 T 22-04-2016 IPR008979 Galactose-binding domain-like VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 PANTHER PTHR10799 160 167 6.5E-24 T 22-04-2016 VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 PANTHER PTHR10799 307 431 6.5E-24 T 22-04-2016 VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 SMART SM00267 263 430 4.1E-50 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 Pfam PF00990 Diguanylate cyclase, GGDEF domain 274 426 1.9E-38 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 Gene3D G3DSA:3.30.70.270 276 430 6.6E-46 T 22-04-2016 VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 SUPERFAMILY SSF55073 279 429 2.35E-41 T 22-04-2016 IPR029787 Nucleotide cyclase VCLMA_RS05580 39c861e010e5e36a0a9cf1b45ac27433 443 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 272 429 1.3E-43 T 22-04-2016 IPR000160 GGDEF domain VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 PANTHER PTHR11236:SF22 13 515 6.8E-268 T 22-04-2016 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 Pfam PF00425 chorismate binding enzyme 247 507 6.5E-86 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 198 6.4E-16 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 PANTHER PTHR11236 13 515 6.8E-268 T 22-04-2016 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 PIRSF PIRSF001373 3 523 6.9E-257 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 PRINTS PR00095 Anthranilate synthase component I signature 369 382 2.5E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 PRINTS PR00095 Anthranilate synthase component I signature 464 478 2.5E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 PRINTS PR00095 Anthranilate synthase component I signature 449 463 2.5E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 PRINTS PR00095 Anthranilate synthase component I signature 355 368 2.5E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 Gene3D G3DSA:3.60.120.10 12 519 4.6E-164 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 SUPERFAMILY SSF56322 14 515 2.22E-164 T 22-04-2016 IPR005801 ADC synthase GO:0009058 VCLMA_RS05530 2d1d6e130996f32ee6cd01aef7e5a07b 523 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 519 2.4E-228 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 VCLMA_RS06765 94d7a9324ca3b03b0f674dcd0c5bbbab 54 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 2 48 7.0E-15 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VCLMA_RS06765 94d7a9324ca3b03b0f674dcd0c5bbbab 54 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 2.3E-21 T 22-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type VCLMA_RS06765 94d7a9324ca3b03b0f674dcd0c5bbbab 54 PANTHER PTHR41532 2 54 4.2E-22 T 22-04-2016 VCLMA_RS08330 b995f41253838462cffcf712d7e81319 71 Gene3D G3DSA:1.10.720.30 14 70 7.3E-34 T 22-04-2016 IPR003034 SAP domain VCLMA_RS08330 b995f41253838462cffcf712d7e81319 71 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 6 67 7.5E-36 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 VCLMA_RS00235 979bd3b0495f6330651716424c35bcfb 371 Pfam PF02481 DNA recombination-mediator protein A 77 278 4.4E-80 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VCLMA_RS00235 979bd3b0495f6330651716424c35bcfb 371 Gene3D G3DSA:3.40.50.450 113 275 7.8E-15 T 22-04-2016 VCLMA_RS00235 979bd3b0495f6330651716424c35bcfb 371 SUPERFAMILY SSF102405 81 288 7.59E-45 T 22-04-2016 VCLMA_RS00235 979bd3b0495f6330651716424c35bcfb 371 PANTHER PTHR32039 34 370 1.2E-122 T 22-04-2016 VCLMA_RS00235 979bd3b0495f6330651716424c35bcfb 371 PANTHER PTHR32039:SF8 34 370 1.2E-122 T 22-04-2016 VCLMA_RS00235 979bd3b0495f6330651716424c35bcfb 371 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 287 2.5E-77 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PANTHER PTHR30330:SF7 345 494 0.0 T 22-04-2016 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PANTHER PTHR30330:SF7 1 329 0.0 T 22-04-2016 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 5.3E-135 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PANTHER PTHR30330 345 494 0.0 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PANTHER PTHR30330 1 329 0.0 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 Pfam PF01235 Sodium:alanine symporter family 50 472 1.8E-148 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PRINTS PR00175 Sodium/alanine symporter signature 365 387 3.0E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PRINTS PR00175 Sodium/alanine symporter signature 189 207 3.0E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PRINTS PR00175 Sodium/alanine symporter signature 86 108 3.0E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PRINTS PR00175 Sodium/alanine symporter signature 217 236 3.0E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PRINTS PR00175 Sodium/alanine symporter signature 304 322 3.0E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS03810 b945c8e021a1c1a173810cb3d8b459dd 516 PRINTS PR00175 Sodium/alanine symporter signature 428 448 3.0E-57 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VCLMA_RS04470 8db70bddb5d901685dd2aa216ad8308a 154 Pfam PF07295 Zinc-ribbon containing domain 14 153 1.4E-49 T 22-04-2016 IPR009912 Zinc-ribbon containing domain VCLMA_RS06980 9c7902bc2aa864bffb07bf4799d17981 158 SUPERFAMILY SSF54637 12 151 4.11E-14 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS06980 9c7902bc2aa864bffb07bf4799d17981 158 Pfam PF14539 Domain of unknown function (DUF4442) 17 83 6.6E-8 T 22-04-2016 IPR027961 Protein of unknown function DUF4442 VCLMA_RS06980 9c7902bc2aa864bffb07bf4799d17981 158 Gene3D G3DSA:3.10.129.10 11 155 4.3E-25 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS10370 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 Hamap MF_00042 Ribonuclease H [rnhA]. 2 149 36.25 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 VCLMA_RS10370 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 Gene3D G3DSA:3.30.420.10 2 148 1.7E-60 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS10370 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 Pfam PF00075 RNase H 3 142 7.1E-54 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VCLMA_RS10370 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 SUPERFAMILY SSF53098 3 143 4.43E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 VCLMA_RS10370 7aa5f1f2a6dbe3971a7303b8ff07b21f 156 PANTHER PTHR10642 1 152 7.3E-63 T 22-04-2016 VCLMA_RS00605 250a6f89a5b42decbb377a69b3d04fb9 843 Pfam PF12633 Adenylate cyclase NT domain 5 198 7.9E-76 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VCLMA_RS00605 250a6f89a5b42decbb377a69b3d04fb9 843 Pfam PF01295 Adenylate cyclase, class-I 226 829 2.0E-254 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VCLMA_RS00605 250a6f89a5b42decbb377a69b3d04fb9 843 PANTHER PTHR38760 2 843 0.0 T 22-04-2016 VCLMA_RS00605 250a6f89a5b42decbb377a69b3d04fb9 843 PIRSF PIRSF001444 1 843 0.0 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VCLMA_RS03995 9e29c3c159774851d0b44c9eaac70a4b 294 Pfam PF01513 ATP-NAD kinase 8 273 1.0E-70 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VCLMA_RS03995 9e29c3c159774851d0b44c9eaac70a4b 294 PANTHER PTHR20275 2 290 1.0E-116 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VCLMA_RS03995 9e29c3c159774851d0b44c9eaac70a4b 294 SUPERFAMILY SSF111331 8 290 1.44E-91 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain VCLMA_RS03995 9e29c3c159774851d0b44c9eaac70a4b 294 Gene3D G3DSA:2.60.200.30 152 262 8.4E-42 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VCLMA_RS03995 9e29c3c159774851d0b44c9eaac70a4b 294 Gene3D G3DSA:3.40.50.10330 3 151 8.4E-39 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VCLMA_RS03995 9e29c3c159774851d0b44c9eaac70a4b 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.341 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 VCLMA_RS10405 ba2801053ed635309b4aaad87a750eae 107 SUPERFAMILY SSF46626 8 107 4.73E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS10405 ba2801053ed635309b4aaad87a750eae 107 Gene3D G3DSA:1.10.760.10 25 107 3.0E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS10405 ba2801053ed635309b4aaad87a750eae 107 PANTHER PTHR33751 5 107 1.7E-29 T 22-04-2016 VCLMA_RS10405 ba2801053ed635309b4aaad87a750eae 107 Pfam PF00034 Cytochrome c 33 107 3.1E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 VCLMA_RS10405 ba2801053ed635309b4aaad87a750eae 107 PANTHER PTHR33751:SF3 5 107 1.7E-29 T 22-04-2016 VCLMA_RS09530 2031584ad5383cb7f2bd7a7d2fa55baa 295 Gene3D G3DSA:3.40.50.300 21 261 1.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09530 2031584ad5383cb7f2bd7a7d2fa55baa 295 PANTHER PTHR13696:SF3 1 274 4.2E-138 T 22-04-2016 VCLMA_RS09530 2031584ad5383cb7f2bd7a7d2fa55baa 295 SUPERFAMILY SSF52540 22 282 1.17E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase VCLMA_RS09530 2031584ad5383cb7f2bd7a7d2fa55baa 295 PIRSF PIRSF003092 7 288 6.1E-86 T 22-04-2016 IPR025501 ATP binding protein MinD VCLMA_RS09530 2031584ad5383cb7f2bd7a7d2fa55baa 295 PANTHER PTHR13696 1 274 4.2E-138 T 22-04-2016 VCLMA_RS09530 2031584ad5383cb7f2bd7a7d2fa55baa 295 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 25 211 7.2E-25 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VCLMA_RS00755 590e40e249430512ed0b93643ed437bc 123 Pfam PF07226 Protein of unknown function (DUF1422) 9 119 7.2E-48 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 VCLMA_RS00755 590e40e249430512ed0b93643ed437bc 123 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 7 116 2.0E-57 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 VCLMA_RS07785 30e952b9c3b34e690a5735d9cd76d8ec 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 387 1.6E-115 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS07785 30e952b9c3b34e690a5735d9cd76d8ec 396 PIRSF PIRSF001434 1 391 7.0E-123 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS07785 30e952b9c3b34e690a5735d9cd76d8ec 396 Gene3D G3DSA:3.90.1150.10 256 389 4.3E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 VCLMA_RS07785 30e952b9c3b34e690a5735d9cd76d8ec 396 SUPERFAMILY SSF53383 21 388 3.5E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase VCLMA_RS07785 30e952b9c3b34e690a5735d9cd76d8ec 396 Gene3D G3DSA:3.40.640.10 6 255 3.7E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 VCLMA_RS07785 30e952b9c3b34e690a5735d9cd76d8ec 396 PANTHER PTHR11808:SF45 1 392 9.2E-280 T 22-04-2016 VCLMA_RS07785 30e952b9c3b34e690a5735d9cd76d8ec 396 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 389 8.5E-172 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 VCLMA_RS07785 30e952b9c3b34e690a5735d9cd76d8ec 396 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS07785 30e952b9c3b34e690a5735d9cd76d8ec 396 PANTHER PTHR11808 1 392 9.2E-280 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 VCLMA_RS07145 f9a20e0ac953ae6bedc62a03fd92d3cb 327 Pfam PF11279 Protein of unknown function (DUF3080) 26 323 4.0E-90 T 22-04-2016 IPR021431 Protein of unknown function DUF3080 VCLMA_RS02710 56a0a672688518351c6209309efc2701 153 Pfam PF09335 SNARE associated Golgi protein 43 148 4.8E-10 T 22-04-2016 IPR032816 SNARE associated Golgi protein VCLMA_RS02710 56a0a672688518351c6209309efc2701 153 PANTHER PTHR30353:SF12 21 152 1.4E-52 T 22-04-2016 VCLMA_RS02710 56a0a672688518351c6209309efc2701 153 PANTHER PTHR30353 21 152 1.4E-52 T 22-04-2016 IPR032818 DedA family VCLMA_RS10440 0611d86181f8284ecc7eea5087b8bbe9 152 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 10 148 1.2E-58 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VCLMA_RS10440 0611d86181f8284ecc7eea5087b8bbe9 152 Pfam PF07977 FabA-like domain 19 143 3.3E-41 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VCLMA_RS10440 0611d86181f8284ecc7eea5087b8bbe9 152 Gene3D G3DSA:3.10.129.10 4 149 1.5E-57 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS10440 0611d86181f8284ecc7eea5087b8bbe9 152 PANTHER PTHR30272 1 152 9.4E-83 T 22-04-2016 VCLMA_RS10440 0611d86181f8284ecc7eea5087b8bbe9 152 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 151 36.67 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VCLMA_RS10440 0611d86181f8284ecc7eea5087b8bbe9 152 SUPERFAMILY SSF54637 9 148 2.28E-49 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS03945 304a61c8c03d9a72992a2de700ca5fa2 453 Pfam PF07805 HipA-like N-terminal domain 166 261 1.3E-6 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 VCLMA_RS03945 304a61c8c03d9a72992a2de700ca5fa2 453 Pfam PF07804 HipA-like C-terminal domain 315 389 3.9E-12 T 22-04-2016 IPR012893 HipA-like, C-terminal VCLMA_RS03945 304a61c8c03d9a72992a2de700ca5fa2 453 PIRSF PIRSF028135 1 453 5.7E-241 T 22-04-2016 IPR016869 Uncharacterised conserved protein UCP028135, HipA-like VCLMA_RS08060 0214887cd0f6fdafde096c1c3d9be042 82 Pfam PF10692 Protein of unknown function (DUF2498) 4 80 1.3E-41 T 22-04-2016 IPR019633 Protein of unknown function DUF2498 VCLMA_RS16975 fd8b0f61ebcd3272eff1feb07d9be185 147 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 85 147 1.2E-24 T 22-04-2016 VCLMA_RS16975 fd8b0f61ebcd3272eff1feb07d9be185 147 PANTHER PTHR10099:SF5 1 147 2.8E-91 T 22-04-2016 VCLMA_RS16975 fd8b0f61ebcd3272eff1feb07d9be185 147 SMART SM01211 85 147 0.0085 T 22-04-2016 VCLMA_RS16975 fd8b0f61ebcd3272eff1feb07d9be185 147 PANTHER PTHR10099 1 147 2.8E-91 T 22-04-2016 VCLMA_RS16975 fd8b0f61ebcd3272eff1feb07d9be185 147 SUPERFAMILY SSF52317 81 147 2.84E-20 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like VCLMA_RS16975 fd8b0f61ebcd3272eff1feb07d9be185 147 SUPERFAMILY SSF56042 1 79 7.67E-13 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain VCLMA_RS01005 0067ae99a7750e3630dfc3e6aa36f11d 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 5.3E-35 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 VCLMA_RS01005 0067ae99a7750e3630dfc3e6aa36f11d 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 2.1E-42 T 22-04-2016 IPR013527 YicC-like, N-terminal VCLMA_RS01005 0067ae99a7750e3630dfc3e6aa36f11d 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.2E-117 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 VCLMA_RS01005 0067ae99a7750e3630dfc3e6aa36f11d 288 PANTHER PTHR30636 1 288 3.6E-113 T 22-04-2016 VCLMA_RS05630 851a9b40fd9a2c84a2ce1fb8ef171e6a 227 PIRSF PIRSF028111 1 227 6.1E-83 T 22-04-2016 IPR016868 Bacteriophage B3, Orf5 VCLMA_RS05630 851a9b40fd9a2c84a2ce1fb8ef171e6a 227 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.6E-11 T 22-04-2016 IPR024498 Domain of unknown function DUF2786 VCLMA_RS01125 4b3acf9100ecbbcef73e2e442add3d2b 260 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 71 154 5.1E-18 T 22-04-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif VCLMA_RS01125 4b3acf9100ecbbcef73e2e442add3d2b 260 PANTHER PTHR32385 7 260 6.8E-48 T 22-04-2016 VCLMA_RS01125 4b3acf9100ecbbcef73e2e442add3d2b 260 SUPERFAMILY SSF53448 14 258 1.05E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases VCLMA_RS01125 4b3acf9100ecbbcef73e2e442add3d2b 260 PANTHER PTHR32385:SF2 7 260 6.8E-48 T 22-04-2016 VCLMA_RS05880 987e8026578ec1fff1e672f4ce9141ec 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 2.0E-33 T 22-04-2016 IPR021284 Protein of unknown function DUF2750 VCLMA_RS08365 224d04a90fc48dfeefccf1a1c9ea63be 259 PANTHER PTHR30505:SF5 129 259 2.2E-25 T 22-04-2016 VCLMA_RS08365 224d04a90fc48dfeefccf1a1c9ea63be 259 PIRSF PIRSF029195 1 259 1.6E-176 T 22-04-2016 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 VCLMA_RS08365 224d04a90fc48dfeefccf1a1c9ea63be 259 SUPERFAMILY SSF55804 127 250 3.79E-18 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 VCLMA_RS08365 224d04a90fc48dfeefccf1a1c9ea63be 259 SUPERFAMILY SSF55594 9 88 1.83E-10 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS08365 224d04a90fc48dfeefccf1a1c9ea63be 259 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 129 252 4.9E-21 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS08365 224d04a90fc48dfeefccf1a1c9ea63be 259 Gene3D G3DSA:3.40.930.10 130 253 6.2E-20 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- VCLMA_RS08365 224d04a90fc48dfeefccf1a1c9ea63be 259 PANTHER PTHR30505 129 259 2.2E-25 T 22-04-2016 VCLMA_RS08365 224d04a90fc48dfeefccf1a1c9ea63be 259 Gene3D G3DSA:3.30.1340.10 18 87 2.7E-7 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like VCLMA_RS05350 5290b195a89e8302ca41d26ca1df8d86 245 Pfam PF00977 Histidine biosynthesis protein 1 234 4.5E-76 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 VCLMA_RS05350 5290b195a89e8302ca41d26ca1df8d86 245 PANTHER PTHR21235 1 244 3.8E-112 T 22-04-2016 VCLMA_RS05350 5290b195a89e8302ca41d26ca1df8d86 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 3.2E-77 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VCLMA_RS05350 5290b195a89e8302ca41d26ca1df8d86 245 Gene3D G3DSA:3.20.20.70 1 242 5.1E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS05350 5290b195a89e8302ca41d26ca1df8d86 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.595 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 VCLMA_RS05350 5290b195a89e8302ca41d26ca1df8d86 245 SUPERFAMILY SSF51366 1 242 5.65E-64 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 VCLMA_RS05350 5290b195a89e8302ca41d26ca1df8d86 245 PANTHER PTHR21235:SF15 1 244 3.8E-112 T 22-04-2016 VCLMA_RS00010 c21f18297efc90a82ad5219a181f1638 144 PANTHER PTHR19384 2 144 5.9E-28 T 22-04-2016 VCLMA_RS00010 c21f18297efc90a82ad5219a181f1638 144 SUPERFAMILY SSF52218 2 144 7.75E-40 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS00010 c21f18297efc90a82ad5219a181f1638 144 Pfam PF00258 Flavodoxin 4 136 2.0E-22 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VCLMA_RS00010 c21f18297efc90a82ad5219a181f1638 144 Gene3D G3DSA:3.40.50.360 2 143 1.5E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS00010 c21f18297efc90a82ad5219a181f1638 144 PANTHER PTHR19384:SF81 2 144 5.9E-28 T 22-04-2016 VCLMA_RS06180 21931ec1696643209c052d793ac4c8d8 191 PANTHER PTHR13256 17 191 1.2E-82 T 22-04-2016 VCLMA_RS06180 21931ec1696643209c052d793ac4c8d8 191 Gene3D G3DSA:3.40.630.30 15 186 1.6E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS06180 21931ec1696643209c052d793ac4c8d8 191 SUPERFAMILY SSF55729 13 185 1.25E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase VCLMA_RS06180 21931ec1696643209c052d793ac4c8d8 191 PANTHER PTHR13256:SF24 17 191 1.2E-82 T 22-04-2016 VCLMA_RS06180 21931ec1696643209c052d793ac4c8d8 191 Pfam PF13302 Acetyltransferase (GNAT) domain 18 160 9.5E-19 T 22-04-2016 IPR000182 GNAT domain GO:0008080 VCLMA_RS07990 b7f853dcf80eeda6c0ea05b93b9a97dc 240 Pfam PF04288 MukE-like family 10 234 2.1E-117 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VCLMA_RS07990 b7f853dcf80eeda6c0ea05b93b9a97dc 240 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 239 48.669 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VCLMA_RS08385 a92eef0c2b3bc41f6b11474675e13aaa 150 Pfam PF06610 L-alanine exporter 8 142 4.1E-68 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VCLMA_RS08385 a92eef0c2b3bc41f6b11474675e13aaa 150 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 32.067 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VCLMA_RS08385 a92eef0c2b3bc41f6b11474675e13aaa 150 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 5.0E-70 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VCLMA_RS09200 91e698ddf2ff95f277f610f4688fa1df 322 Pfam PF11059 Protein of unknown function (DUF2860) 32 322 9.8E-105 T 22-04-2016 IPR016896 Protein of unknown function DUF2860 VCLMA_RS09200 91e698ddf2ff95f277f610f4688fa1df 322 PIRSF PIRSF028696 1 322 1.6E-129 T 22-04-2016 IPR016896 Protein of unknown function DUF2860 VCLMA_RS10890 859876d805783df5180e1c757aa50285 259 PIRSF PIRSF001357 5 254 7.6E-77 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VCLMA_RS10890 859876d805783df5180e1c757aa50285 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 231 5.3E-81 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VCLMA_RS10890 859876d805783df5180e1c757aa50285 259 SUPERFAMILY SSF51569 6 246 6.8E-82 T 22-04-2016 VCLMA_RS10890 859876d805783df5180e1c757aa50285 259 Gene3D G3DSA:3.20.20.70 5 253 1.1E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 VCLMA_RS10890 859876d805783df5180e1c757aa50285 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 52.655 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VCLMA_RS10890 859876d805783df5180e1c757aa50285 259 Pfam PF01791 DeoC/LacD family aldolase 11 240 4.4E-48 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VCLMA_RS10890 859876d805783df5180e1c757aa50285 259 PANTHER PTHR10889 8 254 1.8E-118 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 VCLMA_RS10890 859876d805783df5180e1c757aa50285 259 SMART SM01133 10 245 2.7E-80 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 VCLMA_RS10890 859876d805783df5180e1c757aa50285 259 PANTHER PTHR10889:SF3 8 254 1.8E-118 T 22-04-2016 VCLMA_RS11870 63d186d84637bc849baa520f585b96ab 81 Pfam PF10795 Protein of unknown function (DUF2607) 1 79 3.3E-37 T 22-04-2016 IPR019731 Protein of unknown function DUF2607 VCLMA_RS07905 5cb052d4668ffb71e6da140b9c5c5b6c 276 Gene3D G3DSA:3.40.50.720 1 177 3.1E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS07905 5cb052d4668ffb71e6da140b9c5c5b6c 276 SUPERFAMILY SSF51735 2 264 1.26E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS07905 5cb052d4668ffb71e6da140b9c5c5b6c 276 PANTHER PTHR14194 2 167 8.7E-13 T 22-04-2016 VCLMA_RS07905 5cb052d4668ffb71e6da140b9c5c5b6c 276 Pfam PF13460 NAD(P)H-binding 9 177 1.6E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain VCLMA_RS08450 80bbcf533332a27625a99dc494b615c5 378 PIRSF PIRSF000267 2 377 1.1E-123 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VCLMA_RS08450 80bbcf533332a27625a99dc494b615c5 378 PANTHER PTHR30365:SF6 1 378 2.1E-195 T 22-04-2016 VCLMA_RS08450 80bbcf533332a27625a99dc494b615c5 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 6.0E-108 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VCLMA_RS08450 80bbcf533332a27625a99dc494b615c5 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 1.7E-172 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VCLMA_RS08450 80bbcf533332a27625a99dc494b615c5 378 PANTHER PTHR30365 1 378 2.1E-195 T 22-04-2016 VCLMA_RS09005 3ce6cce26e50644b33d223ec7f7b707e 162 Pfam PF04170 NlpE N-terminal domain 67 152 1.7E-30 T 22-04-2016 IPR007298 Copper resistance lipoprotein NlpE VCLMA_RS02435 0a30b5f90a261a84f8f5e33b199b9e54 211 PANTHER PTHR30086:SF0 1 209 1.7E-102 T 22-04-2016 VCLMA_RS02435 0a30b5f90a261a84f8f5e33b199b9e54 211 Pfam PF01810 LysE type translocator 15 200 3.1E-39 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS02435 0a30b5f90a261a84f8f5e33b199b9e54 211 PANTHER PTHR30086 1 209 1.7E-102 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 VCLMA_RS00500 06fc9a6b98880fd9df4797d2ad555617 136 PANTHER PTHR35091 14 136 1.4E-44 T 22-04-2016 VCLMA_RS00500 06fc9a6b98880fd9df4797d2ad555617 136 PANTHER PTHR35091:SF2 14 136 1.4E-44 T 22-04-2016 VCLMA_RS00500 06fc9a6b98880fd9df4797d2ad555617 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 2.7E-19 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 6.3E-57 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 3.7E-47 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 PANTHER PTHR12220 1 136 7.0E-73 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 SUPERFAMILY SSF54686 3 133 8.24E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 Gene3D G3DSA:3.90.1170.10 22 134 1.9E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 5.6E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 5.6E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 5.6E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 5.6E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.289 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 VCLMA_RS12055 261f20348a0cd4556c45cbbf13393d93 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VCLMA_RS07035 fa1adf253cd4c64b1f178886a23add8d 200 Pfam PF11748 Protein of unknown function (DUF3306) 7 115 2.9E-20 T 22-04-2016 IPR021735 Protein of unknown function DUF3306 VCLMA_RS04595 0e6cab0f8c21d965b4c42c90fd88c945 173 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 3 172 1.0E-81 T 22-04-2016 VCLMA_RS13045 54529664402c154c755900450a551fde 47 PANTHER PTHR30050 1 47 2.7E-18 T 22-04-2016 VCLMA_RS13045 54529664402c154c755900450a551fde 47 Pfam PF00308 Bacterial dnaA protein 2 40 5.6E-9 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA VCLMA_RS13045 54529664402c154c755900450a551fde 47 PANTHER PTHR30050:SF2 1 47 2.7E-18 T 22-04-2016 VCLMA_RS13045 54529664402c154c755900450a551fde 47 Gene3D G3DSA:1.10.8.60 1 47 2.3E-20 T 22-04-2016 VCLMA_RS11460 608aecf7a382752b00978547bd3d4ec9 68 Gene3D G3DSA:3.30.1910.10 1 65 7.3E-31 T 22-04-2016 VCLMA_RS11460 608aecf7a382752b00978547bd3d4ec9 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.1E-28 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VCLMA_RS11460 608aecf7a382752b00978547bd3d4ec9 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 6.0E-31 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 VCLMA_RS04875 7789397b075f3c9a0ae9d13580287316 703 PANTHER PTHR30441 1 703 3.9E-280 T 22-04-2016 VCLMA_RS04875 7789397b075f3c9a0ae9d13580287316 703 Pfam PF05170 AsmA family 1 595 5.7E-174 T 22-04-2016 IPR007844 AsmA VCLMA_RS04875 7789397b075f3c9a0ae9d13580287316 703 PANTHER PTHR30441:SF4 1 703 3.9E-280 T 22-04-2016 VCLMA_RS12565 a42c096bbc4c4f78ba6f809dd4a39aec 435 PANTHER PTHR36106:SF2 1 435 0.0 T 22-04-2016 VCLMA_RS12565 a42c096bbc4c4f78ba6f809dd4a39aec 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 434 8.2E-179 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VCLMA_RS12565 a42c096bbc4c4f78ba6f809dd4a39aec 435 PANTHER PTHR36106 1 435 0.0 T 22-04-2016 VCLMA_RS12565 a42c096bbc4c4f78ba6f809dd4a39aec 435 PIRSF PIRSF004539 1 435 9.8E-179 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VCLMA_RS12565 a42c096bbc4c4f78ba6f809dd4a39aec 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 2.7E-143 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VCLMA_RS01760 ec638b3ca6e21b97827b9127f85c7816 62 PANTHER PTHR38602:SF1 1 62 1.9E-21 T 22-04-2016 VCLMA_RS01760 ec638b3ca6e21b97827b9127f85c7816 62 PANTHER PTHR38602 1 62 1.9E-21 T 22-04-2016 VCLMA_RS01760 ec638b3ca6e21b97827b9127f85c7816 62 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 7.3E-23 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 VCLMA_RS09780 d728c15b625ed0280ddce8a398a54e33 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.5E-16 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VCLMA_RS09780 d728c15b625ed0280ddce8a398a54e33 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.5E-16 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VCLMA_RS09780 d728c15b625ed0280ddce8a398a54e33 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.5E-16 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VCLMA_RS09780 d728c15b625ed0280ddce8a398a54e33 89 PIRSF PIRSF004669 1 89 3.0E-29 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VCLMA_RS09780 d728c15b625ed0280ddce8a398a54e33 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.0E-27 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VCLMA_RS09780 d728c15b625ed0280ddce8a398a54e33 89 PANTHER PTHR34040 1 89 7.7E-39 T 22-04-2016 VCLMA_RS09780 d728c15b625ed0280ddce8a398a54e33 89 PANTHER PTHR34040:SF2 1 89 7.7E-39 T 22-04-2016 VCLMA_RS09780 d728c15b625ed0280ddce8a398a54e33 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.4E-34 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VCLMA_RS07125 01d5ff5d46527078be88cb0d41bf507d 113 Pfam PF12290 Protein of unknown function (DUF3802) 2 109 5.9E-42 T 22-04-2016 IPR020979 Uncharacterised protein family A0KLC6 VCLMA_RS02090 bec08e30b8cbb010f80fc9fd3e16b626 1252 SUPERFAMILY SSF49899 277 430 2.7E-22 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VCLMA_RS02090 bec08e30b8cbb010f80fc9fd3e16b626 1252 SUPERFAMILY SSF49899 461 538 2.7E-22 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VCLMA_RS02090 bec08e30b8cbb010f80fc9fd3e16b626 1252 Gene3D G3DSA:2.60.120.200 295 540 5.2E-17 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain VCLMA_RS08920 21ce6d2d77a36928d967a890e9b9b6b1 431 Pfam PF10129 OpgC protein 3 361 2.2E-87 T 22-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC VCLMA_RS08920 21ce6d2d77a36928d967a890e9b9b6b1 431 PIRSF PIRSF028704 1 384 3.5E-131 T 22-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC VCLMA_RS08920 21ce6d2d77a36928d967a890e9b9b6b1 431 PANTHER PTHR38592 1 430 2.6E-148 T 22-04-2016 VCLMA_RS01870 7b37f1168373ca440c61e12a9e0bd30f 54 Gene3D G3DSA:2.60.120.460 1 54 3.0E-17 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VCLMA_RS01870 7b37f1168373ca440c61e12a9e0bd30f 54 Pfam PF01894 Uncharacterised protein family UPF0047 19 54 1.2E-7 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VCLMA_RS01870 7b37f1168373ca440c61e12a9e0bd30f 54 PANTHER PTHR30615 1 54 4.1E-22 T 22-04-2016 VCLMA_RS01870 7b37f1168373ca440c61e12a9e0bd30f 54 SUPERFAMILY SSF111038 1 54 2.88E-14 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 VCLMA_RS05280 048793ef83534868b4fe901a8b367197 179 Pfam PF11086 Protein of unknown function (DUF2878) 4 150 1.0E-31 T 22-04-2016 IPR021306 Protein of unknown function DUF2878 VCLMA_RS06875 880e01ee488657028c670f7e41e897a8 172 Pfam PF07977 FabA-like domain 29 158 2.4E-54 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 VCLMA_RS06875 880e01ee488657028c670f7e41e897a8 172 SUPERFAMILY SSF54637 4 169 2.46E-56 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS06875 880e01ee488657028c670f7e41e897a8 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 1.0E-91 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VCLMA_RS06875 880e01ee488657028c670f7e41e897a8 172 Gene3D G3DSA:3.10.129.10 2 169 5.4E-59 T 22-04-2016 IPR029069 HotDog domain VCLMA_RS06875 880e01ee488657028c670f7e41e897a8 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.464 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 VCLMA_RS00690 abcf691df3a80088e8e8040db40f1b33 109 Pfam PF10694 Protein of unknown function (DUF2500) 4 105 5.1E-25 T 22-04-2016 IPR019635 Protein of unknown function DUF2500 VCLMA_RS10910 614f255d60d3fc3e1727f28d3ebf3edd 257 PANTHER PTHR30283 2 255 3.7E-124 T 22-04-2016 VCLMA_RS10910 614f255d60d3fc3e1727f28d3ebf3edd 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.219 T 22-04-2016 IPR005583 Peroxide stress protein YaaA VCLMA_RS10910 614f255d60d3fc3e1727f28d3ebf3edd 257 PANTHER PTHR30283:SF3 2 255 3.7E-124 T 22-04-2016 VCLMA_RS10910 614f255d60d3fc3e1727f28d3ebf3edd 257 Pfam PF03883 Protein of unknown function (DUF328) 1 242 1.3E-92 T 22-04-2016 IPR005583 Peroxide stress protein YaaA VCLMA_RS00410 f41811c854fd87bff7a0c17b79982caa 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 34.875 T 22-04-2016 IPR019598 Universal stress protein B VCLMA_RS00410 f41811c854fd87bff7a0c17b79982caa 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 4.5E-51 T 22-04-2016 IPR019598 Universal stress protein B VCLMA_RS09210 fab0fdb9288693ffa67f725d2248d61b 306 SUPERFAMILY SSF159501 23 274 6.28E-75 T 22-04-2016 VCLMA_RS09210 fab0fdb9288693ffa67f725d2248d61b 306 PIRSF PIRSF020419 1 290 1.9E-119 T 22-04-2016 IPR016773 Ferric uptake regulator, CjrA, predicted VCLMA_RS09210 fab0fdb9288693ffa67f725d2248d61b 306 PANTHER PTHR31620:SF8 26 262 3.8E-15 T 22-04-2016 VCLMA_RS09210 fab0fdb9288693ffa67f725d2248d61b 306 Pfam PF04187 Haem-binding uptake, Tiki superfamily, ChaN 46 246 2.8E-58 T 22-04-2016 IPR007314 Haem-binding uptake, Tiki superfamily, ChaN VCLMA_RS09210 fab0fdb9288693ffa67f725d2248d61b 306 PANTHER PTHR31620 26 262 3.8E-15 T 22-04-2016 VCLMA_RS08585 f798b5e775a14aef419c22d34ce66a60 220 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 204 2.8E-7 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 VCLMA_RS12505 4360b85734712fbfabb29b92472d2739 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.054 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VCLMA_RS12505 4360b85734712fbfabb29b92472d2739 80 Pfam PF06005 Protein of unknown function (DUF904) 1 77 1.0E-25 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 VCLMA_RS04080 4f7189b65e10e2319b782b1f63a0f654 63 Pfam PF14056 Domain of unknown function (DUF4250) 8 62 5.7E-21 T 22-04-2016 IPR025346 Protein of unknown function DUF4250 VCLMA_RS09485 5fb078af44d0cbba8a7088f245a0d0b6 159 Pfam PF10975 Protein of unknown function (DUF2802) 68 134 4.1E-23 T 22-04-2016 IPR021244 Protein of unknown function DUF2802 VCLMA_RS09495 1d26b9665374a653b1760649695f3ff3 338 SMART SM00260 190 324 0.0014 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09495 1d26b9665374a653b1760649695f3ff3 338 SUPERFAMILY SSF50341 192 326 1.7E-13 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS09495 1d26b9665374a653b1760649695f3ff3 338 PIRSF PIRSF020479 4 338 7.8E-146 T 22-04-2016 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VCLMA_RS09495 1d26b9665374a653b1760649695f3ff3 338 Pfam PF01584 CheW-like domain 194 326 3.1E-14 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 VCLMA_RS04900 0dc09db90f462d4eb4c77d8d727d7917 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 239 1.5E-84 T 22-04-2016 IPR021806 Protein of unknown function DUF3379 VCLMA_RS08110 6c38aea3d0d4890e8663e9e42be55de9 93 Pfam PF07383 Protein of unknown function (DUF1496) 34 78 9.1E-22 T 22-04-2016 IPR009971 Protein of unknown function DUF1496 VCLMA_RS06115 b17da4ef8918725f93c49c828734df45 282 SUPERFAMILY SSF53613 9 272 6.39E-82 T 22-04-2016 IPR029056 Ribokinase-like VCLMA_RS06115 b17da4ef8918725f93c49c828734df45 282 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 12 269 3.4E-99 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VCLMA_RS06115 b17da4ef8918725f93c49c828734df45 282 PANTHER PTHR20858:SF17 1 279 5.9E-126 T 22-04-2016 VCLMA_RS06115 b17da4ef8918725f93c49c828734df45 282 PANTHER PTHR20858 1 279 5.9E-126 T 22-04-2016 VCLMA_RS06115 b17da4ef8918725f93c49c828734df45 282 Gene3D G3DSA:3.40.1190.20 10 269 8.9E-102 T 22-04-2016 IPR029056 Ribokinase-like VCLMA_RS06115 b17da4ef8918725f93c49c828734df45 282 Pfam PF08543 Phosphomethylpyrimidine kinase 19 267 4.5E-95 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 VCLMA_RS00935 9d863441dbc31a741b220ed37660ae1d 300 Pfam PF00892 EamA-like transporter family 10 143 8.4E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 VCLMA_RS00935 9d863441dbc31a741b220ed37660ae1d 300 PANTHER PTHR22911 1 300 5.2E-155 T 22-04-2016 VCLMA_RS00935 9d863441dbc31a741b220ed37660ae1d 300 SUPERFAMILY SSF103481 44 144 1.44E-12 T 22-04-2016 VCLMA_RS00935 9d863441dbc31a741b220ed37660ae1d 300 SUPERFAMILY SSF103481 187 289 8.37E-9 T 22-04-2016 VCLMA_RS00935 9d863441dbc31a741b220ed37660ae1d 300 PANTHER PTHR22911:SF41 1 300 5.2E-155 T 22-04-2016 VCLMA_RS00935 9d863441dbc31a741b220ed37660ae1d 300 TIGRFAM TIGR00688 rarD: protein RarD 9 263 9.5E-84 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 VCLMA_RS04365 351b1bbc434d33912058930adc0f4aa0 398 Pfam PF10082 Putative beta-barrel porin 2 42 395 1.3E-29 T 22-04-2016 IPR018759 Putative beta-barrel porin 2 VCLMA_RS09740 4347212a485878370654243f82f5a3d3 176 Pfam PF04315 Elongation factor P hydroxylase 11 169 9.6E-75 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- VCLMA_RS01035 656335de521975ae5aec498469545ffb 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 3.9E-76 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VCLMA_RS01035 656335de521975ae5aec498469545ffb 399 Gene3D G3DSA:3.40.50.1950 2 186 1.4E-64 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VCLMA_RS01035 656335de521975ae5aec498469545ffb 399 Pfam PF02441 Flavoprotein 7 135 3.9E-32 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VCLMA_RS01035 656335de521975ae5aec498469545ffb 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 3.2E-152 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 VCLMA_RS01035 656335de521975ae5aec498469545ffb 399 PANTHER PTHR14359:SF20 2 399 7.3E-204 T 22-04-2016 VCLMA_RS01035 656335de521975ae5aec498469545ffb 399 PANTHER PTHR14359 2 399 7.3E-204 T 22-04-2016 VCLMA_RS01035 656335de521975ae5aec498469545ffb 399 SUPERFAMILY SSF52507 1 181 1.05E-60 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 VCLMA_RS01035 656335de521975ae5aec498469545ffb 399 Gene3D G3DSA:3.40.50.10300 187 398 1.8E-90 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VCLMA_RS01035 656335de521975ae5aec498469545ffb 399 SUPERFAMILY SSF102645 184 398 7.72E-82 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 VCLMA_RS04140 d81601e47fd1843ee57fbf510b76ab9d 100 Pfam PF11743 Protein of unknown function (DUF3301) 5 96 2.1E-30 T 22-04-2016 IPR021732 Protein of unknown function DUF3301 VCLMA_RS09375 9729e94dc2831b1e93657dfcd23a3f1f 401 Pfam PF01627 Hpt domain 301 376 6.2E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS09375 9729e94dc2831b1e93657dfcd23a3f1f 401 SMART SM00073 292 387 1.2E-4 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS09375 9729e94dc2831b1e93657dfcd23a3f1f 401 Gene3D G3DSA:1.20.120.160 283 383 4.9E-23 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS09375 9729e94dc2831b1e93657dfcd23a3f1f 401 SUPERFAMILY SSF47226 283 377 4.71E-17 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 VCLMA_RS09980 a014f155978cd73a8fb9f277909b005c 186 PANTHER PTHR30546 1 185 4.0E-72 T 22-04-2016 VCLMA_RS09980 a014f155978cd73a8fb9f277909b005c 186 SUPERFAMILY SSF52218 1 185 1.56E-57 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS09980 a014f155978cd73a8fb9f277909b005c 186 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VCLMA_RS09980 a014f155978cd73a8fb9f277909b005c 186 Gene3D G3DSA:3.40.50.360 1 186 1.6E-67 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS09980 a014f155978cd73a8fb9f277909b005c 186 Pfam PF03358 NADPH-dependent FMN reductase 11 131 4.5E-11 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VCLMA_RS05890 bfb2db1eee2d673f115b1590262274f7 170 Pfam PF13740 ACT domain 4 64 3.9E-10 T 22-04-2016 VCLMA_RS05890 bfb2db1eee2d673f115b1590262274f7 170 PANTHER PTHR34875 1 169 7.2E-37 T 22-04-2016 VCLMA_RS05890 bfb2db1eee2d673f115b1590262274f7 170 PIRSF PIRSF028103 1 170 9.2E-54 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VCLMA_RS05890 bfb2db1eee2d673f115b1590262274f7 170 Gene3D G3DSA:3.30.70.260 2 66 1.6E-5 T 22-04-2016 VCLMA_RS05890 bfb2db1eee2d673f115b1590262274f7 170 SUPERFAMILY SSF55021 88 166 5.0E-9 T 22-04-2016 VCLMA_RS05890 bfb2db1eee2d673f115b1590262274f7 170 Gene3D G3DSA:3.30.70.260 85 169 1.3E-14 T 22-04-2016 VCLMA_RS07890 654120001d8db4bc954070d940d43a3c 60 Pfam PF06796 Periplasmic nitrate reductase protein NapE 5 55 4.7E-26 T 22-04-2016 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VCLMA_RS07890 654120001d8db4bc954070d940d43a3c 60 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 8 57 1.0E-30 T 22-04-2016 IPR014316 Trimethylamine N-oxide reductase system, TorE VCLMA_RS06735 5782bb6d49629d8060c5ad4b7d100496 266 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 123 259 8.0E-18 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VCLMA_RS06735 5782bb6d49629d8060c5ad4b7d100496 266 PANTHER PTHR40572 1 266 7.6E-89 T 22-04-2016 VCLMA_RS02915 0dde229cfea6d7b771d4f8da9b92d99b 450 Pfam PF12697 Alpha/beta hydrolase family 78 303 9.5E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 VCLMA_RS02915 0dde229cfea6d7b771d4f8da9b92d99b 450 Gene3D G3DSA:3.40.50.1820 137 182 2.8E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS02915 0dde229cfea6d7b771d4f8da9b92d99b 450 Gene3D G3DSA:3.40.50.1820 70 102 2.8E-7 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS02915 0dde229cfea6d7b771d4f8da9b92d99b 450 Gene3D G3DSA:3.40.50.1820 283 368 5.7E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS02915 0dde229cfea6d7b771d4f8da9b92d99b 450 Gene3D G3DSA:3.40.50.1820 183 225 5.7E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS02915 0dde229cfea6d7b771d4f8da9b92d99b 450 SUPERFAMILY SSF53474 11 251 1.22E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold VCLMA_RS07140 95724cb87323f6fdda99734609e73986 457 PANTHER PTHR11206 2 454 6.4E-227 T 22-04-2016 VCLMA_RS07140 95724cb87323f6fdda99734609e73986 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 1.8E-120 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS07140 95724cb87323f6fdda99734609e73986 457 Pfam PF01554 MatE 243 404 2.0E-36 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS07140 95724cb87323f6fdda99734609e73986 457 Pfam PF01554 MatE 17 176 1.3E-38 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS07140 95724cb87323f6fdda99734609e73986 457 PIRSF PIRSF006603 5 452 7.6E-63 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 VCLMA_RS07140 95724cb87323f6fdda99734609e73986 457 PANTHER PTHR11206:SF153 2 454 6.4E-227 T 22-04-2016 VCLMA_RS01620 6719259dcdcc3fcf71e0ff97a89c8347 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 3 154 5.4E-56 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VCLMA_RS01620 6719259dcdcc3fcf71e0ff97a89c8347 164 PIRSF PIRSF016548 3 164 1.1E-73 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VCLMA_RS11605 c82319ad74dd99482503763e25a42f67 417 SUPERFAMILY SSF109604 163 329 2.09E-27 T 22-04-2016 VCLMA_RS11605 c82319ad74dd99482503763e25a42f67 417 SMART SM00471 164 300 1.9E-9 T 22-04-2016 IPR003607 HD/PDEase domain VCLMA_RS11605 c82319ad74dd99482503763e25a42f67 417 Pfam PF11871 Domain of unknown function (DUF3391) 4 135 1.2E-32 T 22-04-2016 IPR021812 Protein of unknown function DUF3391 VCLMA_RS11605 c82319ad74dd99482503763e25a42f67 417 TIGRFAM TIGR00277 HDIG: HDIG domain 166 259 2.6E-8 T 22-04-2016 IPR006675 HDIG domain VCLMA_RS11605 c82319ad74dd99482503763e25a42f67 417 Gene3D G3DSA:1.10.3210.10 166 310 8.3E-20 T 22-04-2016 IPR006674 HD domain VCLMA_RS11605 c82319ad74dd99482503763e25a42f67 417 Pfam PF01966 HD domain 170 290 1.7E-16 T 22-04-2016 IPR006674 HD domain VCLMA_RS00710 c78143656b6c6173b14a5580cdc42957 207 Pfam PF07947 YhhN-like protein 26 205 3.8E-33 T 22-04-2016 IPR012506 YhhN-like GO:0016021 VCLMA_RS08700 3f3c63c6631f3a36e464a31a738d4875 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 5.4E-32 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 VCLMA_RS10190 2a2ffc0952b428f84988c9de43399d55 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 9.2E-54 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 VCLMA_RS10190 2a2ffc0952b428f84988c9de43399d55 249 SUPERFAMILY SSF117143 77 207 2.75E-17 T 22-04-2016 VCLMA_RS10190 2a2ffc0952b428f84988c9de43399d55 249 PANTHER PTHR30435:SF18 1 249 5.3E-116 T 22-04-2016 VCLMA_RS10190 2a2ffc0952b428f84988c9de43399d55 249 Pfam PF00460 Flagella basal body rod protein 8 35 2.0E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VCLMA_RS10190 2a2ffc0952b428f84988c9de43399d55 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 4.7E-34 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VCLMA_RS10190 2a2ffc0952b428f84988c9de43399d55 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 1.0E-22 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VCLMA_RS10190 2a2ffc0952b428f84988c9de43399d55 249 PANTHER PTHR30435 1 249 5.3E-116 T 22-04-2016 VCLMA_RS08425 7e32598b38f75cbb883b50ce62377879 146 PANTHER PTHR30558:SF7 4 144 5.3E-59 T 22-04-2016 VCLMA_RS08425 7e32598b38f75cbb883b50ce62377879 146 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 145 8.3E-26 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 VCLMA_RS08425 7e32598b38f75cbb883b50ce62377879 146 PANTHER PTHR30558 4 144 5.3E-59 T 22-04-2016 VCLMA_RS05945 74430838dd1b3c9c2e898dd621ee4847 404 SUPERFAMILY SSF103473 5 389 1.07E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain VCLMA_RS05945 74430838dd1b3c9c2e898dd621ee4847 404 Pfam PF07690 Major Facilitator Superfamily 11 198 1.9E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS05945 74430838dd1b3c9c2e898dd621ee4847 404 Pfam PF07690 Major Facilitator Superfamily 217 384 4.1E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VCLMA_RS05945 74430838dd1b3c9c2e898dd621ee4847 404 PANTHER PTHR23535:SF2 1 396 5.5E-199 T 22-04-2016 VCLMA_RS05945 74430838dd1b3c9c2e898dd621ee4847 404 Gene3D G3DSA:1.20.1250.20 3 187 5.5E-19 T 22-04-2016 VCLMA_RS05945 74430838dd1b3c9c2e898dd621ee4847 404 Gene3D G3DSA:1.20.1250.20 211 390 1.8E-21 T 22-04-2016 VCLMA_RS05945 74430838dd1b3c9c2e898dd621ee4847 404 PANTHER PTHR23535 1 396 5.5E-199 T 22-04-2016 VCLMA_RS04695 397026c8b1c95a870adcc20b9cf6e664 163 PANTHER PTHR36926:SF1 1 163 1.1E-81 T 22-04-2016 VCLMA_RS04695 397026c8b1c95a870adcc20b9cf6e664 163 PANTHER PTHR36926 1 163 1.1E-81 T 22-04-2016 VCLMA_RS04695 397026c8b1c95a870adcc20b9cf6e664 163 Pfam PF02674 Colicin V production protein 4 142 5.8E-36 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VCLMA_RS01640 76d45ccaef4f6331820354922934a583 319 SUPERFAMILY SSF64182 5 318 5.23E-41 T 22-04-2016 VCLMA_RS04385 74dc2ac864e7c54b6a83c1d84ab6445f 144 Pfam PF04892 VanZ like family 62 128 1.1E-7 T 22-04-2016 IPR006976 VanZ-like VCLMA_RS05285 b3a37f80dbc3e7b98f3c923e97fbf05f 188 Pfam PF16036 Chalcone isomerase-like 45 184 1.2E-9 T 22-04-2016 IPR016087 Chalcone isomerase GO:0016872 VCLMA_RS09805 0f5b70c5cc736b893f92c79b8bd3df15 167 Pfam PF03748 Flagellar basal body-associated protein FliL 66 167 2.6E-20 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VCLMA_RS09805 0f5b70c5cc736b893f92c79b8bd3df15 167 PANTHER PTHR35091 1 167 2.5E-77 T 22-04-2016 VCLMA_RS09805 0f5b70c5cc736b893f92c79b8bd3df15 167 PANTHER PTHR35091:SF1 1 167 2.5E-77 T 22-04-2016 VCLMA_RS09425 0b1de55e8e808f08ac3bea6f7bdd8449 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 1 163 3.3E-61 T 22-04-2016 IPR021879 Ribosomal S4P (gammaproteobacterial) VCLMA_RS07755 ac1cbe410abc22ccbc416e72f8a3c2f4 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VCLMA_RS07755 ac1cbe410abc22ccbc416e72f8a3c2f4 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 89 1.6E-9 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VCLMA_RS05895 6a628ff54d343354c3bed16d675b224a 299 Pfam PF13084 Domain of unknown function (DUF3943) 136 245 1.3E-37 T 22-04-2016 IPR025079 Domain of unknown function DUF3943 VCLMA_RS04230 ac5acf80de4a3ad13f91b662d9ada248 182 Hamap MF_01104 Protein Syd [syd]. 3 181 38.163 T 22-04-2016 IPR009948 Syd GO:0009898 VCLMA_RS04230 ac5acf80de4a3ad13f91b662d9ada248 182 Pfam PF07348 Syd protein (SUKH-2) 7 179 2.5E-71 T 22-04-2016 IPR009948 Syd GO:0009898 VCLMA_RS12900 0fd62aed1e72387d29d8dbdb85ced661 174 SUPERFAMILY SSF52218 2 173 9.01E-32 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS12900 0fd62aed1e72387d29d8dbdb85ced661 174 Pfam PF12724 Flavodoxin domain 4 152 9.9E-50 T 22-04-2016 IPR026816 Flavodoxin domain VCLMA_RS12900 0fd62aed1e72387d29d8dbdb85ced661 174 PANTHER PTHR38030:SF2 1 174 6.3E-97 T 22-04-2016 VCLMA_RS12900 0fd62aed1e72387d29d8dbdb85ced661 174 PANTHER PTHR38030 1 174 6.3E-97 T 22-04-2016 VCLMA_RS12900 0fd62aed1e72387d29d8dbdb85ced661 174 Gene3D G3DSA:3.40.50.360 2 71 2.0E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS12900 0fd62aed1e72387d29d8dbdb85ced661 174 Gene3D G3DSA:3.40.50.360 105 171 2.0E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain VCLMA_RS06960 6761e035f7978ac9cfeb842a3ea84b5c 879 Pfam PF02470 MlaD protein 285 375 2.0E-8 T 22-04-2016 IPR003399 Mce/MlaD VCLMA_RS06960 6761e035f7978ac9cfeb842a3ea84b5c 879 Pfam PF02470 MlaD protein 47 137 9.9E-12 T 22-04-2016 IPR003399 Mce/MlaD VCLMA_RS06960 6761e035f7978ac9cfeb842a3ea84b5c 879 Pfam PF02470 MlaD protein 399 460 1.7E-9 T 22-04-2016 IPR003399 Mce/MlaD VCLMA_RS06960 6761e035f7978ac9cfeb842a3ea84b5c 879 Pfam PF02470 MlaD protein 748 817 2.0E-7 T 22-04-2016 IPR003399 Mce/MlaD VCLMA_RS06960 6761e035f7978ac9cfeb842a3ea84b5c 879 Pfam PF02470 MlaD protein 641 707 1.7E-6 T 22-04-2016 IPR003399 Mce/MlaD VCLMA_RS06960 6761e035f7978ac9cfeb842a3ea84b5c 879 Pfam PF02470 MlaD protein 164 224 3.9E-8 T 22-04-2016 IPR003399 Mce/MlaD VCLMA_RS06960 6761e035f7978ac9cfeb842a3ea84b5c 879 PANTHER PTHR30462:SF0 1 878 0.0 T 22-04-2016 VCLMA_RS06960 6761e035f7978ac9cfeb842a3ea84b5c 879 PANTHER PTHR30462 1 878 0.0 T 22-04-2016 VCLMA_RS09195 6e94cc9021c006ad299c2986f9ec8957 296 PANTHER PTHR11122 5 296 8.1E-111 T 22-04-2016 VCLMA_RS09195 6e94cc9021c006ad299c2986f9ec8957 296 Gene3D G3DSA:2.70.98.10 10 292 4.1E-92 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 VCLMA_RS09195 6e94cc9021c006ad299c2986f9ec8957 296 PANTHER PTHR11122:SF14 5 296 8.1E-111 T 22-04-2016 VCLMA_RS09195 6e94cc9021c006ad299c2986f9ec8957 296 PIRSF PIRSF016020 3 296 4.7E-65 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VCLMA_RS09195 6e94cc9021c006ad299c2986f9ec8957 296 SUPERFAMILY SSF74650 6 288 7.53E-77 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 VCLMA_RS09195 6e94cc9021c006ad299c2986f9ec8957 296 Pfam PF01263 Aldose 1-epimerase 27 292 5.0E-55 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VCLMA_RS07300 88545bc74113e914e7bc85da5f1f10e6 152 Pfam PF09900 Predicted membrane protein (DUF2127) 7 143 5.6E-43 T 22-04-2016 IPR021125 Protein of unknown function DUF2127 VCLMA_RS05865 d3dd80dfa673b1de39466e32192721ea 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 32.046 T 22-04-2016 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VCLMA_RS05865 d3dd80dfa673b1de39466e32192721ea 331 PANTHER PTHR30472 1 330 7.6E-206 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS05865 d3dd80dfa673b1de39466e32192721ea 331 Gene3D G3DSA:1.10.3470.10 9 327 1.6E-94 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS05865 d3dd80dfa673b1de39466e32192721ea 331 Pfam PF01032 FecCD transport family 25 326 2.5E-80 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 VCLMA_RS05865 d3dd80dfa673b1de39466e32192721ea 331 PANTHER PTHR30472:SF29 1 330 7.6E-206 T 22-04-2016 VCLMA_RS05865 d3dd80dfa673b1de39466e32192721ea 331 SUPERFAMILY SSF81345 7 327 5.89E-80 T 22-04-2016 IPR029022 ABC transporter, BtuC-like VCLMA_RS12980 2708430f1f6167c8dd63cd0ab31e0ecd 129 Pfam PF03899 ATP synthase I chain 15 111 4.0E-17 T 22-04-2016 IPR005598 ATP synthase protein I VCLMA_RS05960 21b8c20cbd953511ef0492c56ba7791b 420 Pfam PF09375 Imelysin 40 398 2.8E-96 T 22-04-2016 VCLMA_RS09745 d9992e2c47890a844ad51a7621ab7c01 207 PANTHER PTHR30506 1 207 9.3E-127 T 22-04-2016 VCLMA_RS09745 d9992e2c47890a844ad51a7621ab7c01 207 PANTHER PTHR30506:SF2 1 207 9.3E-127 T 22-04-2016 VCLMA_RS09745 d9992e2c47890a844ad51a7621ab7c01 207 Pfam PF03458 UPF0126 domain 92 163 2.2E-21 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VCLMA_RS09745 d9992e2c47890a844ad51a7621ab7c01 207 Pfam PF03458 UPF0126 domain 5 79 2.8E-20 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 VCLMA_RS00075 57d22009812f613d6db3fd2e101ef887 140 SUPERFAMILY SSF54534 50 122 1.57E-5 T 22-04-2016 VCLMA_RS00075 57d22009812f613d6db3fd2e101ef887 140 Gene3D G3DSA:3.10.50.30 49 123 1.1E-6 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VCLMA_RS08035 ceb60726dc271d9959badce344f1302a 103 Pfam PF09413 Putative prokaryotic signal transducing protein 2 68 1.0E-10 T 22-04-2016 IPR018551 Domain of unknown function DUF2007 VCLMA_RS11890 083f5138aa51a9f1d1aafdd096d846a0 173 Pfam PF11736 Protein of unknown function (DUF3299) 36 170 6.5E-45 T 22-04-2016 IPR021727 Protein of unknown function DUF3299 VCLMA_RS02020 60f1729e3889cb92a5fc8c3998175356 216 Gene3D G3DSA:3.30.70.60 112 180 1.8E-6 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VCLMA_RS02020 60f1729e3889cb92a5fc8c3998175356 216 Pfam PF04612 Type II secretion system (T2SS), protein M 7 98 2.7E-8 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 VCLMA_RS06835 39d2c181d1166d359fab2b51d9e00040 153 Pfam PF02794 RTX toxin acyltransferase family 18 150 2.0E-45 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- VCLMA_RS06835 39d2c181d1166d359fab2b51d9e00040 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 20 36 4.9E-6 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- VCLMA_RS06835 39d2c181d1166d359fab2b51d9e00040 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 85 107 4.9E-6 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- VCLMA_RS06835 39d2c181d1166d359fab2b51d9e00040 153 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 63 81 4.9E-6 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- VCLMA_RS16000 95e4f00bef2b171f46952b28edc5c782 73 PANTHER PTHR32063 1 71 8.1E-31 T 22-04-2016 VCLMA_RS16000 95e4f00bef2b171f46952b28edc5c782 73 PANTHER PTHR32063:SF31 1 71 8.1E-31 T 22-04-2016 VCLMA_RS05995 ad9844fb47d2c3329f70f3601d511a82 224 Pfam PF11201 Protein of unknown function (DUF2982) 67 216 2.1E-61 T 22-04-2016 IPR021367 Protein of unknown function DUF2982 VCLMA_RS12415 c7d0abc619a4939412373bdfd4e3d5a7 119 Pfam PF11333 Protein of unknown function (DUF3135) 14 93 7.2E-34 T 22-04-2016 IPR021482 Protein of unknown function DUF3135 VCLMA_RS11315 29a2b4c0c30f55be315a030acfc6ef43 202 PIRSF PIRSF006158 1 202 5.4E-66 T 22-04-2016 IPR016476 SH3 domain protein VCLMA_RS11315 29a2b4c0c30f55be315a030acfc6ef43 202 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 23 201 2.7E-50 T 22-04-2016 IPR016476 SH3 domain protein VCLMA_RS11315 29a2b4c0c30f55be315a030acfc6ef43 202 SMART SM00287 19 85 4.2E-9 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type VCLMA_RS11315 29a2b4c0c30f55be315a030acfc6ef43 202 Pfam PF08239 Bacterial SH3 domain 31 81 2.4E-9 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type VCLMA_RS09810 e71089c8d3caa0c80cd5ecacbbd1258e 669 PRINTS PR01007 Flagellar hook-length control protein signature 555 573 1.4E-9 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 VCLMA_RS09810 e71089c8d3caa0c80cd5ecacbbd1258e 669 PRINTS PR01007 Flagellar hook-length control protein signature 588 611 1.4E-9 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 VCLMA_RS09810 e71089c8d3caa0c80cd5ecacbbd1258e 669 PRINTS PR01007 Flagellar hook-length control protein signature 314 331 1.4E-9 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 VCLMA_RS09810 e71089c8d3caa0c80cd5ecacbbd1258e 669 Pfam PF02120 Flagellar hook-length control protein FliK 540 623 3.2E-27 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal VCLMA_RS09810 e71089c8d3caa0c80cd5ecacbbd1258e 669 PANTHER PTHR37533 141 669 1.9E-191 T 22-04-2016 VCLMA_RS09810 e71089c8d3caa0c80cd5ecacbbd1258e 669 PANTHER PTHR37533:SF2 141 669 1.9E-191 T 22-04-2016 VCLMA_RS04350 25f525c43dbe3dffbac40c2f4c6d26a0 438 Pfam PF04932 O-Antigen ligase 217 359 9.1E-20 T 22-04-2016 IPR007016 O-antigen ligase-related VCLMA_RS08635 baaf5548a69c4d48e29301a81018aaa4 176 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 22 164 3.5E-47 T 22-04-2016 IPR018639 Domain of unknown function DUF2062 VCLMA_RS08635 baaf5548a69c4d48e29301a81018aaa4 176 PANTHER PTHR40547 1 176 5.9E-57 T 22-04-2016 VCLMA_RS08635 baaf5548a69c4d48e29301a81018aaa4 176 PANTHER PTHR40547:SF1 1 176 5.9E-57 T 22-04-2016 VCLMA_RS09950 69383ad28576cc31e333b5e8a327472b 155 Gene3D G3DSA:3.40.30.10 2 152 2.1E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS09950 69383ad28576cc31e333b5e8a327472b 155 SUPERFAMILY SSF52833 1 152 2.19E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold VCLMA_RS09950 69383ad28576cc31e333b5e8a327472b 155 PANTHER PTHR10681 1 136 1.7E-47 T 22-04-2016 VCLMA_RS09950 69383ad28576cc31e333b5e8a327472b 155 Pfam PF00578 AhpC/TSA family 7 134 2.8E-34 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 VCLMA_RS05120 e83f9e956463cdd980f6a8834f5e2b86 270 Gene3D G3DSA:3.40.190.10 107 169 9.6E-9 T 22-04-2016 VCLMA_RS05120 e83f9e956463cdd980f6a8834f5e2b86 270 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 23 253 3.9E-57 T 22-04-2016 VCLMA_RS05120 e83f9e956463cdd980f6a8834f5e2b86 270 SUPERFAMILY SSF53850 3 267 5.3E-34 T 22-04-2016 VCLMA_RS02775 b9e2646889030bef26ce152b0a13abb4 164 Pfam PF06295 Protein of unknown function (DUF1043) 6 113 1.5E-37 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 VCLMA_RS02775 b9e2646889030bef26ce152b0a13abb4 164 PANTHER PTHR39579 1 113 9.1E-43 T 22-04-2016 VCLMA_RS07090 15c6a085e5f632c37b012ba49077f319 91 Pfam PF11173 Protein of unknown function (DUF2960) 1 75 3.4E-35 T 22-04-2016 IPR021343 Protein of unknown function DUF2960 VCLMA_RS03985 d7d8619e1a69d739dec9b8d1841572f1 119 PANTHER PTHR37482 1 119 1.0E-53 T 22-04-2016 VCLMA_RS03985 d7d8619e1a69d739dec9b8d1841572f1 119 PANTHER PTHR37482:SF1 1 119 1.0E-53 T 22-04-2016 VCLMA_RS03985 d7d8619e1a69d739dec9b8d1841572f1 119 Pfam PF04355 SmpA / OmlA family 35 104 1.1E-25 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VCLMA_RS03985 d7d8619e1a69d739dec9b8d1841572f1 119 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 7 112 34.307 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE VCLMA_RS07950 5e10d929a3f3f0dbcddd845774189e39 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 6.7E-20 T 22-04-2016 IPR025346 Protein of unknown function DUF4250 VCLMA_RS02310 2deaff4648be8b8e2b211eaacf765d26 143 Pfam PF14467 Domain of unknown function (DUF4426) 23 142 4.1E-47 T 22-04-2016 IPR025218 Domain of unknown function DUF4426 VCLMA_RS12135 8ed2dddd859ec8350baf897d691b5d7b 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 57 4.4E-20 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VCLMA_RS12135 8ed2dddd859ec8350baf897d691b5d7b 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 60 4.5E-33 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 VCLMA_RS07650 2f27f8110901235609d2c65ddd290101 396 Pfam PF11301 Protein of unknown function (DUF3103) 42 395 5.6E-183 T 22-04-2016 IPR021452 Protein of unknown function DUF3103 VCLMA_RS00945 5fb39bd5db4b33ede91bf69753552d7a 99 Pfam PF12305 Protein of unknown function (DUF3630) 5 97 2.8E-35 T 22-04-2016 IPR022080 Protein of unknown function DUF3630 VCLMA_RS09900 33767415e76d4daafa9912280ebe4f33 154 Pfam PF11143 Protein of unknown function (DUF2919) 3 147 4.4E-54 T 22-04-2016 IPR021318 Protein of unknown function DUF2919 VCLMA_RS10360 b4b7e34e7425576ecc9a7abfb142e4ee 419 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 24 401 2.2E-153 T 22-04-2016 IPR020010 Conserved hypothetical protein CHP03503 VCLMA_RS09320 9205d9ae7854a9c5eeb5345ba8fab6d8 174 Pfam PF02620 Uncharacterized ACR, COG1399 62 173 3.2E-17 T 22-04-2016 IPR003772 Protein of unknown function DUF177 VCLMA_RS09320 9205d9ae7854a9c5eeb5345ba8fab6d8 174 PANTHER PTHR38099 2 174 5.0E-79 T 22-04-2016 VCLMA_RS01230 a7be50f976c09dad87a695a228d7e58b 81 Pfam PF05575 Vibrio cholerae RfbT protein 15 81 2.8E-43 T 22-04-2016 IPR008890 Vibrio cholerae RfbT VCLMA_RS00650 744666020dd18f8ce0564c4f9b28d485 198 SMART SM01144 1 191 2.4E-53 T 22-04-2016 IPR005636 DTW VCLMA_RS00650 744666020dd18f8ce0564c4f9b28d485 198 PANTHER PTHR21392:SF1 5 189 5.2E-80 T 22-04-2016 VCLMA_RS00650 744666020dd18f8ce0564c4f9b28d485 198 PANTHER PTHR21392 5 189 5.2E-80 T 22-04-2016 VCLMA_RS00650 744666020dd18f8ce0564c4f9b28d485 198 Pfam PF03942 DTW domain 4 184 5.5E-45 T 22-04-2016 IPR005636 DTW VCLMA_RS12270 17c04a63a391d6692aee7315faf8e89f 194 PANTHER PTHR40278:SF1 1 194 1.3E-59 T 22-04-2016 VCLMA_RS12270 17c04a63a391d6692aee7315faf8e89f 194 Pfam PF05137 Fimbrial assembly protein (PilN) 102 178 1.3E-15 T 22-04-2016 IPR007813 Fimbrial assembly PilN VCLMA_RS12270 17c04a63a391d6692aee7315faf8e89f 194 PANTHER PTHR40278 1 194 1.3E-59 T 22-04-2016 VCLMA_RS10615 80182149e08331108b930a9d2c8068ac 256 Pfam PF11101 Protein of unknown function (DUF2884) 30 254 9.7E-69 T 22-04-2016 IPR021307 Protein of unknown function DUF2884 VCLMA_RS06295 72db2768da3b9d350d020b111e0e0e6c 165 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 21 156 3.1E-15 T 22-04-2016 IPR009936 Protein of unknown function DUF1468 VCLMA_RS00560 ddb4e7ef05871c70331363e31791a833 212 Gene3D G3DSA:3.40.50.150 72 203 1.8E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00560 ddb4e7ef05871c70331363e31791a833 212 SUPERFAMILY SSF53335 46 198 1.28E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VCLMA_RS00560 ddb4e7ef05871c70331363e31791a833 212 Pfam PF13489 Methyltransferase domain 61 197 5.7E-21 T 22-04-2016 VCLMA_RS10860 aa517b72a1a2969852ce34b4e96bccb7 779 Pfam PF07238 PilZ domain 144 228 2.7E-7 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VCLMA_RS10860 aa517b72a1a2969852ce34b4e96bccb7 779 Pfam PF07238 PilZ domain 469 553 1.9E-9 T 22-04-2016 IPR009875 PilZ domain GO:0035438 VCLMA_RS10860 aa517b72a1a2969852ce34b4e96bccb7 779 SUPERFAMILY SSF141371 465 552 2.16E-6 T 22-04-2016 VCLMA_RS15750 f5e482ba6ba6d880c4fef2b6b8f75a85 65 SUPERFAMILY SSF55083 1 64 7.06E-16 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS15750 f5e482ba6ba6d880c4fef2b6b8f75a85 65 PANTHER PTHR20941:SF10 1 65 9.0E-22 T 22-04-2016 VCLMA_RS15750 f5e482ba6ba6d880c4fef2b6b8f75a85 65 Gene3D G3DSA:3.30.70.560 1 65 2.2E-17 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS15750 f5e482ba6ba6d880c4fef2b6b8f75a85 65 PANTHER PTHR20941 1 65 9.0E-22 T 22-04-2016 VCLMA_RS15750 f5e482ba6ba6d880c4fef2b6b8f75a85 65 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 1 65 3.1E-11 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 VCLMA_RS03295 fe5e7ede353bacee739a1ceaeb51a036 382 PANTHER PTHR10010 19 381 1.9E-132 T 22-04-2016 VCLMA_RS03295 fe5e7ede353bacee739a1ceaeb51a036 382 PANTHER PTHR10010:SF8 19 381 1.9E-132 T 22-04-2016 IPR030147 Sodium-dependent phosphate transporter NptA-like GO:0015114|GO:0035435 VCLMA_RS03295 fe5e7ede353bacee739a1ceaeb51a036 382 Pfam PF02690 Na+/Pi-cotransporter 30 150 2.4E-23 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VCLMA_RS03295 fe5e7ede353bacee739a1ceaeb51a036 382 Pfam PF02690 Na+/Pi-cotransporter 218 324 3.3E-19 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 VCLMA_RS07815 f9004f6f1b049b6d629cf233495a3a5a 77 Pfam PF06667 Phage shock protein B 3 74 4.7E-33 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VCLMA_RS07815 f9004f6f1b049b6d629cf233495a3a5a 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 2.8E-37 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VCLMA_RS05970 1c4d95831dc8d989e840b099f4bf8607 335 Pfam PF09375 Imelysin 40 311 2.3E-36 T 22-04-2016 VCLMA_RS05290 4b91c33096bdd330ba73cc862b9df797 175 Pfam PF12915 Protein of unknown function (DUF3833) 13 173 3.6E-64 T 22-04-2016 IPR024409 Protein of unknown function DUF3833 VCLMA_RS03860 6d18a3d36e528bc2326a502738efe194 448 Pfam PF03390 2-hydroxycarboxylate transporter family 25 442 2.0E-148 T 22-04-2016 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 VCLMA_RS03860 6d18a3d36e528bc2326a502738efe194 448 PANTHER PTHR40033 1 448 1.1E-206 T 22-04-2016 VCLMA_RS03860 6d18a3d36e528bc2326a502738efe194 448 PIRSF PIRSF005348 1 448 2.1E-163 T 22-04-2016 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 VCLMA_RS07135 159dc3d2fa25970b8e9576a368f5a31e 67 PIRSF PIRSF037225 1 65 3.0E-26 T 22-04-2016 IPR017143 Uncharacterised conserved protein UCP037225 VCLMA_RS07135 159dc3d2fa25970b8e9576a368f5a31e 67 Pfam PF14255 Cysteine-rich CPXCG 9 60 1.4E-20 T 22-04-2016 IPR025990 Cysteine-rich CPXCG protein VCLMA_RS09180 d9dae512ed50605530e4da776cbc71ea 274 Pfam PF11207 Protein of unknown function (DUF2989) 16 218 3.3E-75 T 22-04-2016 IPR021372 Protein of unknown function DUF2989 VCLMA_RS04025 f029846b04e4b039369b5f22cb7eb406 196 PIRSF PIRSF004525 3 196 1.6E-14 T 22-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted VCLMA_RS08665 367b1b8d0079c10b09f8f38a0cbd1747 254 Pfam PF10972 Peptidoglycan-binding protein, CsiV 6 252 6.4E-63 T 22-04-2016 IPR021241 Peptidoglycan-binding protein, CsiV VCLMA_RS00565 3994f9074fbbf176b689f5905e495bee 182 Pfam PF04220 Der GTPase activator (YihI) 21 172 9.3E-45 T 22-04-2016 IPR007336 Der GTPase activator VCLMA_RS00565 3994f9074fbbf176b689f5905e495bee 182 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 175 16.797 T 22-04-2016 IPR007336 Der GTPase activator VCLMA_RS12550 c08a812e6defbac13365b0110f27cb4d 161 PANTHER PTHR35335 1 160 1.2E-43 T 22-04-2016 VCLMA_RS12550 c08a812e6defbac13365b0110f27cb4d 161 PANTHER PTHR35335:SF1 1 160 1.2E-43 T 22-04-2016 VCLMA_RS12550 c08a812e6defbac13365b0110f27cb4d 161 Pfam PF04186 FxsA cytoplasmic membrane protein 8 113 1.7E-35 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VCLMA_RS06225 c40842176afe1d40286e135edce23f36 257 Pfam PF06629 MltA-interacting protein MipA 50 257 5.5E-42 T 22-04-2016 IPR010583 MltA-interacting MipA VCLMA_RS06225 c40842176afe1d40286e135edce23f36 257 PANTHER PTHR38776 1 257 2.6E-94 T 22-04-2016 VCLMA_RS08785 1bbbbb892429b9096ada1c906e793258 93 Pfam PF06305 Protein of unknown function (DUF1049) 22 83 9.9E-15 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VCLMA_RS08785 1bbbbb892429b9096ada1c906e793258 93 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 93 18.839 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VCLMA_RS06860 6953532f9ac2589dcfb97538e3df0af0 83 Pfam PF12321 Protein of unknown function (DUF3634) 1 80 2.3E-31 T 22-04-2016 IPR022090 Protein of unknown function DUF3634 VCLMA_RS11955 a45aa7266c9ed5d2b9b48c844c09d724 158 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 10 153 5.9E-32 T 22-04-2016 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VCLMA_RS12800 9967abc1643989dd0b49203443965590 196 Pfam PF13511 Domain of unknown function (DUF4124) 13 61 6.7E-12 T 22-04-2016 IPR025392 Domain of unknown function DUF4124 VCLMA_RS00200 6678c468416f68060b5e430dc6394a1d 185 Pfam PF11355 Protein of unknown function (DUF3157) 3 184 6.8E-64 T 22-04-2016 IPR021501 Protein of unknown function DUF3157 VCLMA_RS09985 b49c3785f6f9883596e80364316c7cff 138 Pfam PF09842 Predicted membrane protein (DUF2069) 11 113 1.2E-33 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane VCLMA_RS00695 b5e66884eb353eb317a1bb3bad483af7 122 Pfam PF13643 Domain of unknown function (DUF4145) 12 76 8.0E-5 T 22-04-2016 IPR025285 Domain of unknown function DUF4145 VCLMA_RS01095 e785667e4a282bb6edf269b5d452660b 319 Pfam PF07507 WavE lipopolysaccharide synthesis 6 301 3.8E-112 T 22-04-2016 IPR011122 WavE lipopolysaccharide synthesis VCLMA_RS07315 01e1cf729802705a6cd13020cd26774a 78 Gene3D G3DSA:1.10.1200.10 2 75 7.7E-4 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS07315 01e1cf729802705a6cd13020cd26774a 78 SUPERFAMILY SSF47336 2 76 7.49E-6 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain VCLMA_RS07530 c1de16c63372fa802058eb6da036b01f 182 Pfam PF07209 Protein of unknown function (DUF1415) 6 173 2.4E-66 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 VCLMA_RS10625 b1cc3177487d44ef443f67d1a913e392 77 PANTHER PTHR40691 2 76 5.5E-30 T 22-04-2016 VCLMA_RS10625 b1cc3177487d44ef443f67d1a913e392 77 Pfam PF04400 Protein of unknown function (DUF539) 22 63 1.0E-21 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM VCLMA_RS12300 5eef3a128bfb8287989437c9859daaba 84 Pfam PF12292 Protein of unknown function (DUF3624) 1 79 1.0E-36 T 22-04-2016 IPR022072 Protein of unknown function DUF3624 VCLMA_RS06495 eebaf151ccc3a5bca207c104f9292a4f 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 9.4E-54 T 22-04-2016 IPR021212 Domain of unknown function DUF2760 VCLMA_RS00570 a54fbd7abbb3cc23be8a356168811175 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 2.2E-46 T 22-04-2016 IPR019617 Domain of unknown function DUF2489 VCLMA_RS09910 ff26d42355ff8baac27e2f17cb2fbb31 95 PIRSF PIRSF037266 1 94 5.8E-42 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VCLMA_RS09910 ff26d42355ff8baac27e2f17cb2fbb31 95 Pfam PF09904 Winged helix-turn helix 4 91 1.3E-38 T 22-04-2016 IPR017162 Uncharacterised conserved protein UCP037266 VCLMA_RS04145 8508943e792104681b6d580a2163678d 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 1.2E-130 T 22-04-2016 IPR021936 Protein of unknown function DUF3549 VCLMA_RS10675 96e6cf50d894289f9644f7e755dbe21f 191 Pfam PF03923 Uncharacterized lipoprotein 28 186 4.4E-52 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG