locus-tag class description NW313_RS00005 PF00308 Bacterial dnaA protein NW313_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix NW313_RS00005 PF11638 DnaA N-terminal domain NW313_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NW313_RS00010 PF02767 DNA polymerase III beta subunit, central domain NW313_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NW313_RS00015 PF02463 RecF/RecN/SMC N terminal domain NW313_RS00020 PF01751 Toprim domain NW313_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS00020 PF18053 DNA gyrase B subunit insert domain NW313_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus NW313_RS00020 PF00204 DNA gyrase B NW313_RS00030 PF00011 Hsp20/alpha crystallin family NW313_RS00035 PF00155 Aminotransferase class I and II NW313_RS00040 PF05746 DALR anticodon binding domain NW313_RS00040 PF02092 Glycyl-tRNA synthetase beta subunit NW313_RS00045 PF02091 Glycyl-tRNA synthetase alpha subunit NW313_RS00050 PF01169 Uncharacterized protein family UPF0016 NW313_RS00060 PF01206 Sulfurtransferase TusA NW313_RS00070 PF00107 Zinc-binding dehydrogenase NW313_RS00070 PF08240 Alcohol dehydrogenase GroES-like domain NW313_RS00075 PF00291 Pyridoxal-phosphate dependent enzyme NW313_RS00075 PF00585 C-terminal regulatory domain of Threonine dehydratase NW313_RS00080 PF00920 Dehydratase family NW313_RS00085 PF01063 Amino-transferase class IV NW313_RS00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW313_RS00095 PF00205 Thiamine pyrophosphate enzyme, central domain NW313_RS00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW313_RS00100 PF13335 Magnesium chelatase, subunit ChlI C-terminal NW313_RS00100 PF01078 Magnesium chelatase, subunit ChlI NW313_RS00105 PF01553 Acyltransferase NW313_RS00110 PF01323 DSBA-like thioredoxin domain NW313_RS00115 PF01636 Phosphotransferase enzyme family NW313_RS00120 PF13746 4Fe-4S dicluster domain NW313_RS00120 PF12801 4Fe-4S binding domain NW313_RS00120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase NW313_RS00125 PF06288 Protein of unknown function (DUF1040) NW313_RS00130 PF07070 SpoOM protein NW313_RS00135 PF03006 Haemolysin-III related NW313_RS00145 PF02386 Cation transport protein NW313_RS00150 PF02254 TrkA-N domain NW313_RS00150 PF02080 TrkA-C domain NW313_RS00155 PF01189 16S rRNA methyltransferase RsmB/F NW313_RS00155 PF01029 NusB family NW313_RS00160 PF02911 Formyl transferase, C-terminal domain NW313_RS00160 PF00551 Formyl transferase NW313_RS00165 PF01327 Polypeptide deformylase NW313_RS00170 PF01476 LysM domain NW313_RS00175 PF02481 DNA recombination-mediator protein A NW313_RS00175 PF17782 DprA winged helix domain NW313_RS00180 PF04361 Protein of unknown function (DUF494) NW313_RS00185 PF01396 Topoisomerase DNA binding C4 zinc finger NW313_RS00190 PF02222 ATP-grasp domain NW313_RS00190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NW313_RS00195 PF00731 AIR carboxylase NW313_RS00200 PF01300 Telomere recombination NW313_RS00205 PF01218 Coproporphyrinogen III oxidase NW313_RS00210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NW313_RS00210 PF01488 Shikimate / quinate 5-dehydrogenase NW313_RS00210 PF08501 Shikimate dehydrogenase substrate binding domain NW313_RS00220 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS00260 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NW313_RS00265 PF13667 ThiC-associated domain NW313_RS00265 PF01964 Radical SAM ThiC family NW313_RS00270 PF02581 Thiamine monophosphate synthase NW313_RS00275 PF00899 ThiF family NW313_RS00280 PF02597 ThiS family NW313_RS00285 PF05690 Thiazole biosynthesis protein ThiG NW313_RS00290 PF06968 Biotin and Thiamin Synthesis associated domain NW313_RS00290 PF04055 Radical SAM superfamily NW313_RS00295 PF00557 Metallopeptidase family M24 NW313_RS00295 PF01321 Creatinase/Prolidase N-terminal domain NW313_RS00295 PF00557 Metallopeptidase family M24 NW313_RS00295 PF01321 Creatinase/Prolidase N-terminal domain NW313_RS00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS00300 PF03466 LysR substrate binding domain NW313_RS00305 PF07690 Major Facilitator Superfamily NW313_RS00315 PF01037 Lrp/AsnC ligand binding domain NW313_RS00320 PF00563 EAL domain NW313_RS00320 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS00320 PF08448 PAS fold NW313_RS00325 PF04445 Putative SAM-dependent methyltransferase NW313_RS00335 PF00892 EamA-like transporter family NW313_RS00340 PF00582 Universal stress protein family NW313_RS00345 PF00210 Ferritin-like domain NW313_RS00350 PF10625 Universal stress protein B (UspB) NW313_RS00365 PF02646 RmuC family NW313_RS00370 PF01209 ubiE/COQ5 methyltransferase family NW313_RS00375 PF02036 SCP-2 sterol transfer family NW313_RS00380 PF03109 ABC1 family NW313_RS00385 PF02416 mttA/Hcf106 family NW313_RS00390 PF02416 mttA/Hcf106 family NW313_RS00395 PF00902 Sec-independent protein translocase protein (TatC) NW313_RS00400 PF03150 Di-haem cytochrome c peroxidase NW313_RS00400 PF00034 Cytochrome c NW313_RS00405 PF01554 MatE NW313_RS00415 PF01726 LexA DNA binding domain NW313_RS00415 PF00717 Peptidase S24-like NW313_RS00420 PF01553 Acyltransferase NW313_RS00425 PF01040 UbiA prenyltransferase family NW313_RS00430 PF04345 Chorismate lyase NW313_RS00435 PF03748 Flagellar basal body-associated protein FliL NW313_RS00440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS00440 PF00672 HAMP domain NW313_RS00440 PF02203 Tar ligand binding domain homologue NW313_RS00445 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NW313_RS00445 PF01694 Rhomboid family NW313_RS00450 PF00581 Rhodanese-like domain NW313_RS00455 PF01026 TatD related DNase NW313_RS00460 PF00490 Delta-aminolevulinic acid dehydratase NW313_RS00470 PF01367 5'-3' exonuclease, C-terminal SAM fold NW313_RS00470 PF00476 DNA polymerase family A NW313_RS00470 PF01612 3'-5' exonuclease NW313_RS00470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NW313_RS00475 PF01926 50S ribosome-binding GTPase NW313_RS00480 PF00034 Cytochrome c NW313_RS00490 PF04220 Der GTPase activator (YihI) NW313_RS00495 PF10675 Protein of unknown function (DUF2489) NW313_RS00500 PF04055 Radical SAM superfamily NW313_RS00500 PF06969 HemN C-terminal domain NW313_RS00505 PF07219 HemY protein N-terminus NW313_RS00510 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase NW313_RS00515 PF02602 Uroporphyrinogen-III synthase HemD NW313_RS00520 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NW313_RS00520 PF03900 Porphobilinogen deaminase, C-terminal domain NW313_RS00525 PF12633 Adenylate cyclase NT domain NW313_RS00525 PF01295 Adenylate cyclase, class-I NW313_RS00530 PF01491 Frataxin-like domain NW313_RS00540 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NW313_RS00540 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NW313_RS00545 PF01678 Diaminopimelate epimerase NW313_RS00550 PF04340 Protein of unknown function, DUF484 NW313_RS00555 PF00589 Phage integrase family NW313_RS00555 PF02899 Phage integrase, N-terminal SAM-like domain NW313_RS00560 PF13419 Haloacid dehalogenase-like hydrolase NW313_RS00565 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS00565 PF10442 FIST C domain NW313_RS00565 PF08495 FIST N domain NW313_RS00565 PF00563 EAL domain NW313_RS00585 PF12146 Serine aminopeptidase, S33 NW313_RS00590 PF01810 LysE type translocator NW313_RS00595 PF00563 EAL domain NW313_RS00595 PF08668 HDOD domain NW313_RS00600 PF00210 Ferritin-like domain NW313_RS00635 PF00448 SRP54-type protein, GTPase domain NW313_RS00635 PF02881 SRP54-type protein, helical bundle domain NW313_RS00640 PF00005 ABC transporter NW313_RS00645 PF18075 FtsX extracellular domain NW313_RS00650 PF04545 Sigma-70, region 4 NW313_RS00650 PF04542 Sigma-70 region 2 NW313_RS00650 PF00140 Sigma-70 factor, region 1.2 NW313_RS00655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NW313_RS00655 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS00660 PF00440 Bacterial regulatory proteins, tetR family NW313_RS00670 PF05958 tRNA (Uracil-5-)-methyltransferase NW313_RS00675 PF07715 TonB-dependent Receptor Plug Domain NW313_RS00675 PF00593 TonB dependent receptor NW313_RS00680 PF00082 Subtilase family NW313_RS00680 PF04151 Bacterial pre-peptidase C-terminal domain NW313_RS00680 PF05922 Peptidase inhibitor I9 NW313_RS00685 PF01177 Asp/Glu/Hydantoin racemase NW313_RS00720 PF00962 Adenosine/AMP deaminase NW313_RS00725 PF00563 EAL domain NW313_RS00725 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS00725 PF03707 Bacterial signalling protein N terminal repeat NW313_RS00725 PF13188 PAS domain NW313_RS00730 PF02954 Bacterial regulatory protein, Fis family NW313_RS00730 PF00072 Response regulator receiver domain NW313_RS00730 PF00158 Sigma-54 interaction domain NW313_RS00735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS00735 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS00735 PF00989 PAS fold NW313_RS00745 PF03951 Glutamine synthetase, beta-Grasp domain NW313_RS00745 PF00120 Glutamine synthetase, catalytic domain NW313_RS00755 PF00679 Elongation factor G C-terminus NW313_RS00755 PF00009 Elongation factor Tu GTP binding domain NW313_RS00755 PF03144 Elongation factor Tu domain 2 NW313_RS00765 PF03631 Virulence factor BrkB NW313_RS00770 PF02580 D-Tyr-tRNA(Tyr) deacylase NW313_RS00775 PF00583 Acetyltransferase (GNAT) family NW313_RS00775 PF09500 Putative thioesterase (yiiD_Cterm) NW313_RS00785 PF01293 Phosphoenolpyruvate carboxykinase NW313_RS00790 PF01430 Hsp33 protein NW313_RS00795 PF01479 S4 domain NW313_RS00800 PF11356 Type II secretion system protein C NW313_RS00805 PF03958 Bacterial type II/III secretion system short domain NW313_RS00805 PF00263 Bacterial type II and III secretion system protein NW313_RS00810 PF00437 Type II/IV secretion system protein NW313_RS00815 PF00482 Type II secretion system (T2SS), protein F NW313_RS00820 PF07963 Prokaryotic N-terminal methylation motif NW313_RS00820 PF08334 Type II secretion system (T2SS), protein G NW313_RS00825 PF12019 Type II transport protein GspH NW313_RS00830 PF07963 Prokaryotic N-terminal methylation motif NW313_RS00830 PF02501 Type II secretion system (T2SS), protein I NW313_RS00835 PF07963 Prokaryotic N-terminal methylation motif NW313_RS00835 PF11612 Type II secretion system (T2SS), protein J NW313_RS00840 PF03934 Type II secretion system (T2SS), protein K NW313_RS00845 PF12693 GspL periplasmic domain NW313_RS00845 PF05134 Type II secretion system (T2SS), protein L NW313_RS00850 PF04612 Type II secretion system (T2SS), protein M NW313_RS00855 PF01203 Type II secretion system (T2SS), protein N NW313_RS00860 PF00459 Inositol monophosphatase family NW313_RS00865 PF00293 NUDIX domain NW313_RS00870 PF01521 Iron-sulphur cluster biosynthesis NW313_RS00870 PF01106 NifU-like domain NW313_RS00875 PF00156 Phosphoribosyl transferase domain NW313_RS00885 PF00561 alpha/beta hydrolase fold NW313_RS00895 PF17674 HHH domain NW313_RS00895 PF00575 S1 RNA binding domain NW313_RS00895 PF09371 Tex-like protein N-terminal domain NW313_RS00895 PF16921 Tex protein YqgF-like domain NW313_RS00900 PF01272 Transcription elongation factor, GreA/GreB, C-term NW313_RS00900 PF03449 Transcription elongation factor, N-terminal NW313_RS00905 PF00072 Response regulator receiver domain NW313_RS00905 PF00486 Transcriptional regulatory protein, C terminal NW313_RS00910 PF00672 HAMP domain NW313_RS00910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS00910 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS00915 PF00860 Permease family NW313_RS00920 PF00270 DEAD/DEAH box helicase NW313_RS00920 PF00271 Helicase conserved C-terminal domain NW313_RS00920 PF17191 RecG wedge domain NW313_RS00925 PF13291 ACT domain NW313_RS00925 PF02824 TGS domain NW313_RS00925 PF04607 Region found in RelA / SpoT proteins NW313_RS00930 PF01192 RNA polymerase Rpb6 NW313_RS00935 PF00625 Guanylate kinase NW313_RS00940 PF02592 Putative vitamin uptake transporter NW313_RS00945 PF00474 Sodium:solute symporter family NW313_RS00955 PF03471 Transporter associated domain NW313_RS00955 PF00999 Sodium/hydrogen exchanger family NW313_RS00955 PF02080 TrkA-C domain NW313_RS00960 PF00196 Bacterial regulatory proteins, luxR family NW313_RS00960 PF00072 Response regulator receiver domain NW313_RS00965 PF11412 Disulphide bond corrector protein DsbC NW313_RS00965 PF02683 Cytochrome C biogenesis protein transmembrane region NW313_RS00975 PF03605 Anaerobic c4-dicarboxylate membrane transporter NW313_RS00980 PF00206 Lyase NW313_RS00980 PF10415 Fumarase C C-terminus NW313_RS00985 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS00985 PF17158 Membrane-associated sensor, integral membrane domain NW313_RS00990 PF04186 FxsA cytoplasmic membrane protein NW313_RS00995 PF00588 SpoU rRNA Methylase family NW313_RS01000 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NW313_RS01000 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NW313_RS01005 PF16527 Two-component sensor protein CpxA, periplasmic domain NW313_RS01005 PF00672 HAMP domain NW313_RS01005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS01005 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS01010 PF00072 Response regulator receiver domain NW313_RS01010 PF00486 Transcriptional regulatory protein, C terminal NW313_RS01020 PF01545 Cation efflux family NW313_RS01020 PF16916 Dimerisation domain of Zinc Transporter NW313_RS01025 PF00365 Phosphofructokinase NW313_RS01030 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded NW313_RS01035 PF06005 Cell division protein ZapB NW313_RS01040 PF02219 Methylenetetrahydrofolate reductase NW313_RS01045 PF03447 Homoserine dehydrogenase, NAD binding domain NW313_RS01045 PF00742 Homoserine dehydrogenase NW313_RS01045 PF00696 Amino acid kinase family NW313_RS01050 PF01053 Cys/Met metabolism PLP-dependent enzyme NW313_RS01055 PF01340 Met Apo-repressor, MetJ NW313_RS01060 PF03949 Malic enzyme, NAD binding domain NW313_RS01060 PF00390 Malic enzyme, N-terminal domain NW313_RS01065 PF01197 Ribosomal protein L31 NW313_RS01070 PF00271 Helicase conserved C-terminal domain NW313_RS01070 PF17764 3′ DNA-binding domain (3′BD) NW313_RS01070 PF18074 Primosomal protein N C-terminal domain NW313_RS01070 PF00270 DEAD/DEAH box helicase NW313_RS01070 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NW313_RS01075 PF00356 Bacterial regulatory proteins, lacI family NW313_RS01080 PF05036 Sporulation related domain NW313_RS01085 PF00227 Proteasome subunit NW313_RS01090 PF00004 ATPase family associated with various cellular activities (AAA) NW313_RS01090 PF07724 AAA domain (Cdc48 subfamily) NW313_RS01090 PF10431 C-terminal, D2-small domain, of ClpB protein NW313_RS01095 PF01040 UbiA prenyltransferase family NW313_RS01100 PF03737 Aldolase/RraA NW313_RS01105 PF01554 MatE NW313_RS01110 PF00121 Triosephosphate isomerase NW313_RS01130 PF00455 DeoR C terminal sensor domain NW313_RS01130 PF08220 DeoR-like helix-turn-helix domain NW313_RS01135 PF00166 Chaperonin 10 Kd subunit NW313_RS01140 PF00118 TCP-1/cpn60 chaperonin family NW313_RS01150 PF04055 Radical SAM superfamily NW313_RS01155 PF01132 Elongation factor P (EF-P) OB domain NW313_RS01155 PF08207 Elongation factor P (EF-P) KOW-like domain NW313_RS01155 PF09285 Elongation factor P, C-terminal NW313_RS01160 PF02313 Fumarate reductase subunit D NW313_RS01165 PF02300 Fumarate reductase subunit C NW313_RS01170 PF13183 4Fe-4S dicluster domain NW313_RS01170 PF13085 2Fe-2S iron-sulfur cluster binding domain NW313_RS01175 PF00890 FAD binding domain NW313_RS01175 PF02910 Fumarate reductase flavoprotein C-term NW313_RS01180 PF00152 tRNA synthetases class II (D, K and N) NW313_RS01185 PF00581 Rhodanese-like domain NW313_RS01190 PF02556 Preprotein translocase subunit SecB NW313_RS01195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NW313_RS01195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NW313_RS01200 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS01200 PF06426 Serine acetyltransferase, N-terminal NW313_RS01210 PF00311 Phosphoenolpyruvate carboxylase NW313_RS01215 PF07687 Peptidase dimerisation domain NW313_RS01215 PF01546 Peptidase family M20/M25/M40 NW313_RS01220 PF01118 Semialdehyde dehydrogenase, NAD binding domain NW313_RS01220 PF02774 Semialdehyde dehydrogenase, dimerisation domain NW313_RS01225 PF00696 Amino acid kinase family NW313_RS01230 PF00764 Arginosuccinate synthase NW313_RS01235 PF14698 Argininosuccinate lyase C-terminal NW313_RS01235 PF00206 Lyase NW313_RS01245 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NW313_RS01245 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS01250 PF08534 Redoxin NW313_RS01250 PF00462 Glutaredoxin NW313_RS01255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS01255 PF03466 LysR substrate binding domain NW313_RS01260 PF00905 Penicillin binding protein transpeptidase domain NW313_RS01260 PF17092 Penicillin-binding protein OB-like domain NW313_RS01260 PF00912 Transglycosylase NW313_RS01280 PF04351 Pilus assembly protein, PilP NW313_RS01285 PF11741 AMIN domain NW313_RS01285 PF00263 Bacterial type II and III secretion system protein NW313_RS01285 PF07660 Secretin and TonB N terminus short domain NW313_RS01285 PF03958 Bacterial type II/III secretion system short domain NW313_RS01290 PF01202 Shikimate kinase NW313_RS01295 PF01761 3-dehydroquinate synthase NW313_RS01305 PF02086 D12 class N6 adenine-specific DNA methyltransferase NW313_RS01310 PF00834 Ribulose-phosphate 3 epimerase family NW313_RS01315 PF13419 Haloacid dehalogenase-like hydrolase NW313_RS01320 PF00579 tRNA synthetases class I (W and Y) NW313_RS01335 PF04055 Radical SAM superfamily NW313_RS01335 PF18693 TRAM domain NW313_RS01335 PF00919 Uncharacterized protein family UPF0004 NW313_RS01340 PF00117 Glutamine amidotransferase class-I NW313_RS01345 PF00202 Aminotransferase class-III NW313_RS01350 PF04958 Arginine N-succinyltransferase beta subunit NW313_RS01355 PF00171 Aldehyde dehydrogenase family NW313_RS01365 PF00027 Cyclic nucleotide-binding domain NW313_RS01365 PF13545 Crp-like helix-turn-helix domain NW313_RS01370 PF00485 Phosphoribulokinase / Uridine kinase family NW313_RS01375 PF06794 Uncharacterised protein family (UPF0270) NW313_RS01380 PF00561 alpha/beta hydrolase fold NW313_RS01390 PF00005 ABC transporter NW313_RS01390 PF12848 ABC transporter NW313_RS01395 PF02525 Flavodoxin-like fold NW313_RS01400 PF02254 TrkA-N domain NW313_RS01400 PF00999 Sodium/hydrogen exchanger family NW313_RS01410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NW313_RS01415 PF01112 Asparaginase NW313_RS01420 PF00709 Adenylosuccinate synthetase NW313_RS01425 PF08238 Sel1 repeat NW313_RS01430 PF00884 Sulfatase NW313_RS01430 PF11893 Domain of unknown function (DUF3413) NW313_RS01435 PF00773 RNB domain NW313_RS01435 PF00575 S1 RNA binding domain NW313_RS01435 PF08206 Ribonuclease B OB domain NW313_RS01435 PF08461 Ribonuclease R winged-helix domain NW313_RS01435 PF17876 Cold shock domain NW313_RS01440 PF00588 SpoU rRNA Methylase family NW313_RS01440 PF08032 RNA 2'-O ribose methyltransferase substrate binding NW313_RS01445 PF00338 Ribosomal protein S10p/S20e NW313_RS01450 PF00297 Ribosomal protein L3 NW313_RS01455 PF00573 Ribosomal protein L4/L1 family NW313_RS01460 PF00276 Ribosomal protein L23 NW313_RS01465 PF00181 Ribosomal Proteins L2, RNA binding domain NW313_RS01465 PF03947 Ribosomal Proteins L2, C-terminal domain NW313_RS01470 PF00203 Ribosomal protein S19 NW313_RS01475 PF00237 Ribosomal protein L22p/L17e NW313_RS01480 PF00189 Ribosomal protein S3, C-terminal domain NW313_RS01480 PF07650 KH domain NW313_RS01485 PF00252 Ribosomal protein L16p/L10e NW313_RS01490 PF00831 Ribosomal L29 protein NW313_RS01495 PF00366 Ribosomal protein S17 NW313_RS01500 PF00238 Ribosomal protein L14p/L23e NW313_RS01505 PF00467 KOW motif NW313_RS01505 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NW313_RS01510 PF00673 ribosomal L5P family C-terminus NW313_RS01510 PF00281 Ribosomal protein L5 NW313_RS01515 PF00253 Ribosomal protein S14p/S29e NW313_RS01520 PF00410 Ribosomal protein S8 NW313_RS01525 PF00347 Ribosomal protein L6 NW313_RS01530 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NW313_RS01535 PF03719 Ribosomal protein S5, C-terminal domain NW313_RS01535 PF00333 Ribosomal protein S5, N-terminal domain NW313_RS01540 PF00327 Ribosomal protein L30p/L7e NW313_RS01545 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NW313_RS01550 PF00344 SecY translocase NW313_RS01555 PF00444 Ribosomal protein L36 NW313_RS01560 PF00416 Ribosomal protein S13/S18 NW313_RS01565 PF00411 Ribosomal protein S11 NW313_RS01570 PF01479 S4 domain NW313_RS01570 PF00163 Ribosomal protein S4/S9 N-terminal domain NW313_RS01575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NW313_RS01575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NW313_RS01575 PF01000 RNA polymerase Rpb3/RpoA insert domain NW313_RS01580 PF01196 Ribosomal protein L17 NW313_RS01590 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NW313_RS01590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NW313_RS01595 PF04225 Opacity-associated protein A LysM-like domain NW313_RS01595 PF08525 Opacity-associated protein A N-terminal motif NW313_RS01600 PF00892 EamA-like transporter family NW313_RS01605 PF13673 Acetyltransferase (GNAT) domain NW313_RS01610 PF03880 DbpA RNA binding domain NW313_RS01610 PF00270 DEAD/DEAH box helicase NW313_RS01610 PF00271 Helicase conserved C-terminal domain NW313_RS01620 PF02872 5'-nucleotidase, C-terminal domain NW313_RS01620 PF00149 Calcineurin-like phosphoesterase NW313_RS01625 PF10414 Sirohaem synthase dimerisation region NW313_RS01625 PF14824 Sirohaem biosynthesis protein central NW313_RS01625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW313_RS01630 PF01507 Phosphoadenosine phosphosulfate reductase family NW313_RS01635 PF00009 Elongation factor Tu GTP binding domain NW313_RS01660 PF00005 ABC transporter NW313_RS01670 PF10795 Protein of unknown function (DUF2607) NW313_RS01675 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) NW313_RS01680 PF01625 Peptide methionine sulfoxide reductase NW313_RS01685 PF01103 Surface antigen NW313_RS01685 PF17243 POTRA domain TamA domain 1 NW313_RS01685 PF07244 Surface antigen variable number repeat NW313_RS01690 PF04357 TamB, inner membrane protein subunit of TAM complex NW313_RS01695 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like NW313_RS01700 PF00719 Inorganic pyrophosphatase NW313_RS01705 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NW313_RS01710 PF02875 Mur ligase family, glutamate ligase domain NW313_RS01710 PF01225 Mur ligase family, catalytic domain NW313_RS01710 PF08245 Mur ligase middle domain NW313_RS01715 PF02441 Flavoprotein NW313_RS01725 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS01730 PF00005 ABC transporter NW313_RS01735 PF04751 Protein of unknown function (DUF615) NW313_RS01740 PF01523 Putative modulator of DNA gyrase NW313_RS01745 PF00571 CBS domain NW313_RS01745 PF01769 Divalent cation transporter NW313_RS01745 PF03448 MgtE intracellular N domain NW313_RS01750 PF00381 PTS HPr component phosphorylation site NW313_RS01755 PF03668 P-loop ATPase protein family NW313_RS01760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NW313_RS01765 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NW313_RS01770 PF04963 Sigma-54 factor, core binding domain NW313_RS01770 PF04552 Sigma-54, DNA binding domain NW313_RS01770 PF00309 Sigma-54 factor, Activator interacting domain (AID) NW313_RS01775 PF00005 ABC transporter NW313_RS01775 PF12399 Branched-chain amino acid ATP-binding cassette transporter NW313_RS01780 PF03968 OstA-like protein NW313_RS01795 PF00571 CBS domain NW313_RS01795 PF01380 SIS domain NW313_RS01800 PF01699 Sodium/calcium exchanger protein NW313_RS01805 PF00005 ABC transporter NW313_RS01810 PF02405 Permease MlaE NW313_RS01815 PF02470 MlaD protein NW313_RS01820 PF05494 MlaC protein NW313_RS01830 PF01722 BolA-like protein NW313_RS01835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NW313_RS01840 PF01553 Acyltransferase NW313_RS01845 PF01042 Endoribonuclease L-PSP NW313_RS01850 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain NW313_RS01850 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain NW313_RS01855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NW313_RS01855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NW313_RS01860 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NW313_RS01860 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NW313_RS01865 PF02562 PhoH-like protein NW313_RS01865 PF13638 PIN domain NW313_RS01870 PF18337 RapA N-terminal Tudor like domain NW313_RS01870 PF00176 SNF2 family N-terminal domain NW313_RS01870 PF18339 RapA N-terminal Tudor like domain 1 NW313_RS01870 PF00271 Helicase conserved C-terminal domain NW313_RS01870 PF12137 RNA polymerase recycling family C-terminal NW313_RS01875 PF00849 RNA pseudouridylate synthase NW313_RS01880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NW313_RS01880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW313_RS01885 PF08264 Anticodon-binding domain of tRNA NW313_RS01885 PF00133 tRNA synthetases class I (I, L, M and V) NW313_RS01885 PF10458 Valyl tRNA synthetase tRNA binding arm NW313_RS01890 PF04364 DNA polymerase III chi subunit, HolC NW313_RS01895 PF02789 Cytosol aminopeptidase family, N-terminal domain NW313_RS01895 PF00883 Cytosol aminopeptidase family, catalytic domain NW313_RS01900 PF03739 Lipopolysaccharide export system permease LptF/LptG NW313_RS01905 PF03739 Lipopolysaccharide export system permease LptF/LptG NW313_RS01920 PF00072 Response regulator receiver domain NW313_RS01965 PF00694 Aconitase C-terminal domain NW313_RS01970 PF00330 Aconitase family (aconitate hydratase) NW313_RS01975 PF00180 Isocitrate/isopropylmalate dehydrogenase NW313_RS01980 PF00682 HMGL-like NW313_RS01980 PF08502 LeuA allosteric (dimerisation) domain NW313_RS01990 PF01569 PAP2 superfamily NW313_RS02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS02000 PF03466 LysR substrate binding domain NW313_RS02005 PF00501 AMP-binding enzyme NW313_RS02010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW313_RS02010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW313_RS02010 PF00205 Thiamine pyrophosphate enzyme, central domain NW313_RS02015 PF10369 Small subunit of acetolactate synthase NW313_RS02020 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NW313_RS02020 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW313_RS02020 PF01842 ACT domain NW313_RS02025 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NW313_RS02030 PF01812 5-formyltetrahydrofolate cyclo-ligase family NW313_RS02040 PF05164 Cell division protein ZapA NW313_RS02045 PF03695 Uncharacterised protein family (UPF0149) NW313_RS02050 PF01494 FAD binding domain NW313_RS02055 PF01494 FAD binding domain NW313_RS02070 PF03937 Flavinator of succinate dehydrogenase NW313_RS02080 PF00890 FAD binding domain NW313_RS02080 PF02910 Fumarate reductase flavoprotein C-term NW313_RS02085 PF04542 Sigma-70 region 2 NW313_RS02085 PF08281 Sigma-70, region 4 NW313_RS02090 PF03873 Anti sigma-E protein RseA, C-terminal domain NW313_RS02090 PF03872 Anti sigma-E protein RseA, N-terminal domain NW313_RS02095 PF03888 MucB/RseB N-terminal domain NW313_RS02095 PF17188 MucB/RseB C-terminal domain NW313_RS02105 PF00679 Elongation factor G C-terminus NW313_RS02105 PF00009 Elongation factor Tu GTP binding domain NW313_RS02105 PF03144 Elongation factor Tu domain 2 NW313_RS02105 PF06421 GTP-binding protein LepA C-terminus NW313_RS02110 PF10502 Signal peptidase, peptidase S26 NW313_RS02115 PF14622 Ribonuclease-III-like NW313_RS02115 PF00035 Double-stranded RNA binding motif NW313_RS02120 PF07650 KH domain NW313_RS02120 PF01926 50S ribosome-binding GTPase NW313_RS02125 PF02565 Recombination protein O C terminal NW313_RS02125 PF11967 Recombination protein O N terminal NW313_RS02130 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NW313_RS02135 PF01648 4'-phosphopantetheinyl transferase superfamily NW313_RS02150 PF00563 EAL domain NW313_RS02150 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS02155 PF00072 Response regulator receiver domain NW313_RS02155 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NW313_RS02155 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS02155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS02155 PF00672 HAMP domain NW313_RS02155 PF01627 Hpt domain NW313_RS02160 PF01938 TRAM domain NW313_RS02160 PF05958 tRNA (Uracil-5-)-methyltransferase NW313_RS02165 PF13291 ACT domain NW313_RS02165 PF04607 Region found in RelA / SpoT proteins NW313_RS02165 PF02824 TGS domain NW313_RS02170 PF03819 MazG nucleotide pyrophosphohydrolase domain NW313_RS02175 PF06418 CTP synthase N-terminus NW313_RS02175 PF00117 Glutamine amidotransferase class-I NW313_RS02180 PF00113 Enolase, C-terminal TIM barrel domain NW313_RS02180 PF03952 Enolase, N-terminal domain NW313_RS02185 PF01743 Poly A polymerase head domain NW313_RS02185 PF12627 Probable RNA and SrmB- binding site of polymerase A NW313_RS02185 PF01966 HD domain NW313_RS02190 PF13401 AAA domain NW313_RS02190 PF01471 Putative peptidoglycan binding domain NW313_RS02200 PF08239 Bacterial SH3 domain NW313_RS02205 PF01384 Phosphate transporter family NW313_RS02210 PF01865 Protein of unknown function DUF47 NW313_RS02215 PF01928 CYTH domain NW313_RS02220 PF02743 Cache domain NW313_RS02220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS02220 PF00672 HAMP domain NW313_RS02225 PF08335 GlnD PII-uridylyltransferase NW313_RS02225 PF03710 Glutamate-ammonia ligase adenylyltransferase NW313_RS02230 PF01467 Cytidylyltransferase-like NW313_RS02230 PF00294 pfkB family carbohydrate kinase NW313_RS02235 PF02321 Outer membrane efflux protein NW313_RS02240 PF00293 NUDIX domain NW313_RS02245 PF06853 Protein of unknown function (DUF1249) NW313_RS02250 PF00149 Calcineurin-like phosphoesterase NW313_RS02255 PF05728 Uncharacterised protein family (UPF0227) NW313_RS02260 PF00204 DNA gyrase B NW313_RS02260 PF00986 DNA gyrase B subunit, carboxyl terminus NW313_RS02260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS02260 PF01751 Toprim domain NW313_RS02265 PF03989 DNA gyrase C-terminal domain, beta-propeller NW313_RS02265 PF00521 DNA gyrase/topoisomerase IV, subunit A NW313_RS02270 PF03884 DNA gyrase inhibitor YacG NW313_RS02275 PF07072 Cell division protein NW313_RS02280 PF01121 Dephospho-CoA kinase NW313_RS02285 PF06750 Bacterial Peptidase A24 N-terminal domain NW313_RS02285 PF01478 Type IV leader peptidase family NW313_RS02290 PF00482 Type II secretion system (T2SS), protein F NW313_RS02295 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NW313_RS02295 PF00437 Type II/IV secretion system protein NW313_RS02300 PF07963 Prokaryotic N-terminal methylation motif NW313_RS02300 PF00114 Pilin (bacterial filament) NW313_RS02305 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NW313_RS02305 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NW313_RS02310 PF01510 N-acetylmuramoyl-L-alanine amidase NW313_RS02315 PF00258 Flavodoxin NW313_RS02320 PF02899 Phage integrase, N-terminal SAM-like domain NW313_RS02320 PF00589 Phage integrase family NW313_RS02325 PF10411 Disulfide bond isomerase protein N-terminus NW313_RS02325 PF13098 Thioredoxin-like domain NW313_RS02330 PF01368 DHH family NW313_RS02330 PF02272 DHHA1 domain NW313_RS02330 PF17768 RecJ OB domain NW313_RS02335 PF00149 Calcineurin-like phosphoesterase NW313_RS02335 PF02872 5'-nucleotidase, C-terminal domain NW313_RS02340 PF07729 FCD domain NW313_RS02340 PF00392 Bacterial regulatory proteins, gntR family NW313_RS02345 PF17831 Pyruvate dehydrogenase E1 component middle domain NW313_RS02345 PF00456 Transketolase, thiamine diphosphate binding domain NW313_RS02350 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NW313_RS02350 PF00364 Biotin-requiring enzyme NW313_RS02350 PF02817 e3 binding domain NW313_RS02355 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS02355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NW313_RS02365 PF01795 MraW methylase family NW313_RS02370 PF04999 Cell division protein FtsL NW313_RS02375 PF03717 Penicillin-binding Protein dimerisation domain NW313_RS02375 PF00905 Penicillin binding protein transpeptidase domain NW313_RS02380 PF01225 Mur ligase family, catalytic domain NW313_RS02380 PF02875 Mur ligase family, glutamate ligase domain NW313_RS02380 PF08245 Mur ligase middle domain NW313_RS02385 PF01225 Mur ligase family, catalytic domain NW313_RS02385 PF02875 Mur ligase family, glutamate ligase domain NW313_RS02385 PF08245 Mur ligase middle domain NW313_RS02390 PF00953 Glycosyl transferase family 4 NW313_RS02390 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NW313_RS02395 PF02875 Mur ligase family, glutamate ligase domain NW313_RS02395 PF08245 Mur ligase middle domain NW313_RS02400 PF01098 Cell cycle protein NW313_RS02405 PF03033 Glycosyltransferase family 28 N-terminal domain NW313_RS02405 PF04101 Glycosyltransferase family 28 C-terminal domain NW313_RS02410 PF08245 Mur ligase middle domain NW313_RS02410 PF01225 Mur ligase family, catalytic domain NW313_RS02410 PF02875 Mur ligase family, glutamate ligase domain NW313_RS02415 PF08478 POTRA domain, FtsQ-type NW313_RS02415 PF03799 Cell division protein FtsQ NW313_RS02420 PF02491 SHS2 domain inserted in FTSA NW313_RS02425 PF12327 FtsZ family, C-terminal domain NW313_RS02425 PF00091 Tubulin/FtsZ family, GTPase domain NW313_RS02430 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NW313_RS02440 PF07517 SecA DEAD-like domain NW313_RS02440 PF02810 SEC-C motif NW313_RS02440 PF07516 SecA Wing and Scaffold domain NW313_RS02440 PF01043 SecA preprotein cross-linking domain NW313_RS02445 PF00293 NUDIX domain NW313_RS02450 PF01113 Dihydrodipicolinate reductase, N-terminus NW313_RS02450 PF05173 Dihydrodipicolinate reductase, C-terminus NW313_RS02460 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NW313_RS02460 PF00117 Glutamine amidotransferase class-I NW313_RS02465 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NW313_RS02465 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NW313_RS02465 PF02142 MGS-like domain NW313_RS02480 PF00005 ABC transporter NW313_RS02485 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) NW313_RS02490 PF01925 Sulfite exporter TauE/SafE NW313_RS02495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS02495 PF03466 LysR substrate binding domain NW313_RS02500 PF03458 UPF0126 domain NW313_RS02505 PF01497 Periplasmic binding protein NW313_RS02515 PF01048 Phosphorylase superfamily NW313_RS02525 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NW313_RS02525 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS02530 PF00310 Glutamine amidotransferases class-II NW313_RS02530 PF04898 Glutamate synthase central domain NW313_RS02530 PF01645 Conserved region in glutamate synthase NW313_RS02530 PF01493 GXGXG motif NW313_RS02535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NW313_RS02535 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS02540 PF04898 Glutamate synthase central domain NW313_RS02540 PF01493 GXGXG motif NW313_RS02540 PF01645 Conserved region in glutamate synthase NW313_RS02540 PF00310 Glutamine amidotransferases class-II NW313_RS02545 PF04055 Radical SAM superfamily NW313_RS02545 PF16199 Radical_SAM C-terminal domain NW313_RS02550 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS02550 PF00360 Phytochrome region NW313_RS02550 PF01590 GAF domain NW313_RS02550 PF00563 EAL domain NW313_RS02555 PF00989 PAS fold NW313_RS02555 PF00072 Response regulator receiver domain NW313_RS02555 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS02555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS02555 PF18415 Histidine kinase receptor ArcB trans-membrane domain NW313_RS02555 PF01627 Hpt domain NW313_RS02560 PF00072 Response regulator receiver domain NW313_RS02560 PF00486 Transcriptional regulatory protein, C terminal NW313_RS02570 PF03737 Aldolase/RraA NW313_RS02585 PF00696 Amino acid kinase family NW313_RS02585 PF01842 ACT domain NW313_RS02585 PF13840 ACT domain NW313_RS02585 PF00742 Homoserine dehydrogenase NW313_RS02585 PF03447 Homoserine dehydrogenase, NAD binding domain NW313_RS02590 PF00288 GHMP kinases N terminal domain NW313_RS02590 PF08544 GHMP kinases C terminal NW313_RS02595 PF00291 Pyridoxal-phosphate dependent enzyme NW313_RS02595 PF14821 Threonine synthase N terminus NW313_RS02600 PF01228 Glycine radical NW313_RS02605 PF01261 Xylose isomerase-like TIM barrel NW313_RS02615 PF03167 Uracil DNA glycosylase superfamily NW313_RS02630 PF01235 Sodium:alanine symporter family NW313_RS02635 PF03883 Peroxide stress protein YaaA NW313_RS02645 PF01026 TatD related DNase NW313_RS02650 PF01773 Na+ dependent nucleoside transporter N-terminus NW313_RS02650 PF07670 Nucleoside recognition NW313_RS02650 PF07662 Na+ dependent nucleoside transporter C-terminus NW313_RS02660 PF01791 DeoC/LacD family aldolase NW313_RS02665 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NW313_RS02665 PF00591 Glycosyl transferase family, a/b domain NW313_RS02665 PF02885 Glycosyl transferase family, helical bundle domain NW313_RS02670 PF01676 Metalloenzyme superfamily NW313_RS02675 PF01048 Phosphorylase superfamily NW313_RS02685 PF18429 Domain of unknown function (DUF5609) NW313_RS02695 PF18073 Rubredoxin metal binding domain NW313_RS02700 PF03764 Elongation factor G, domain IV NW313_RS02700 PF03144 Elongation factor Tu domain 2 NW313_RS02700 PF00009 Elongation factor Tu GTP binding domain NW313_RS02700 PF14492 Elongation Factor G, domain II NW313_RS02700 PF00679 Elongation factor G C-terminus NW313_RS02705 PF00501 AMP-binding enzyme NW313_RS02710 PF00072 Response regulator receiver domain NW313_RS02720 PF00703 Glycosyl hydrolases family 2 NW313_RS02720 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NW313_RS02720 PF02837 Glycosyl hydrolases family 2, sugar binding domain NW313_RS02720 PF02929 Beta galactosidase small chain NW313_RS02720 PF16353 Domain of unknown function(DUF4981) NW313_RS02725 PF00356 Bacterial regulatory proteins, lacI family NW313_RS02730 PF01588 Putative tRNA binding domain NW313_RS02740 PF01544 CorA-like Mg2+ transporter protein NW313_RS02745 PF02080 TrkA-C domain NW313_RS02745 PF08443 RimK-like ATP-grasp domain NW313_RS02745 PF18030 RimK PreATP-grasp domain NW313_RS02750 PF00583 Acetyltransferase (GNAT) family NW313_RS02760 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle NW313_RS02760 PF14602 Hexapeptide repeat of succinyl-transferase NW313_RS02765 PF07130 YebG protein NW313_RS02780 PF17946 RecC C-terminal domain NW313_RS02785 PF13361 UvrD-like helicase C-terminal domain NW313_RS02785 PF12705 PD-(D/E)XK nuclease superfamily NW313_RS02785 PF00580 UvrD/REP helicase N-terminal domain NW313_RS02790 PF13538 UvrD-like helicase C-terminal domain NW313_RS02800 PF00696 Amino acid kinase family NW313_RS02800 PF00583 Acetyltransferase (GNAT) family NW313_RS02810 PF03562 MltA specific insert domain NW313_RS02810 PF06725 3D domain NW313_RS02815 PF00899 ThiF family NW313_RS02820 PF02657 Fe-S metabolism associated domain NW313_RS02825 PF00266 Aminotransferase class-V NW313_RS02830 PF01965 DJ-1/PfpI family NW313_RS02835 PF02558 Ketopantoate reductase PanE/ApbA NW313_RS02835 PF08546 Ketopantoate reductase PanE/ApbA C terminal NW313_RS02840 PF03502 Nucleoside-specific channel-forming protein, Tsx NW313_RS02850 PF04542 Sigma-70 region 2 NW313_RS02850 PF04545 Sigma-70, region 4 NW313_RS02860 PF07690 Major Facilitator Superfamily NW313_RS02865 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NW313_RS02875 PF05175 Methyltransferase small domain NW313_RS02880 PF01722 BolA-like protein NW313_RS02885 PF11973 NQRA C-terminal domain NW313_RS02885 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) NW313_RS02890 PF03116 NQR2, RnfD, RnfE family NW313_RS02895 PF04205 FMN-binding domain NW313_RS02900 PF02508 Rnf-Nqr subunit, membrane protein NW313_RS02905 PF02508 Rnf-Nqr subunit, membrane protein NW313_RS02910 PF00175 Oxidoreductase NAD-binding domain NW313_RS02910 PF00111 2Fe-2S iron-sulfur cluster binding domain NW313_RS02910 PF00970 Oxidoreductase FAD-binding domain NW313_RS02915 PF02424 ApbE family NW313_RS02925 PF00817 impB/mucB/samB family NW313_RS02925 PF11798 IMS family HHH motif NW313_RS02945 PF00872 Transposase, Mutator family NW313_RS02950 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS02950 PF17158 Membrane-associated sensor, integral membrane domain NW313_RS02955 PF00209 Sodium:neurotransmitter symporter family NW313_RS02965 PF18030 RimK PreATP-grasp domain NW313_RS02965 PF08443 RimK-like ATP-grasp domain NW313_RS02970 PF18030 RimK PreATP-grasp domain NW313_RS02970 PF08443 RimK-like ATP-grasp domain NW313_RS02975 PF01546 Peptidase family M20/M25/M40 NW313_RS02975 PF07687 Peptidase dimerisation domain NW313_RS02980 PF00860 Permease family NW313_RS02985 PF00156 Phosphoribosyl transferase domain NW313_RS02990 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) NW313_RS02995 PF07417 Sigma factor-binding transcriptional regulator Crl NW313_RS03000 PF01472 PUA domain NW313_RS03000 PF00696 Amino acid kinase family NW313_RS03005 PF00171 Aldehyde dehydrogenase family NW313_RS03010 PF03477 ATP cone domain NW313_RS03015 PF01872 RibD C-terminal domain NW313_RS03015 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NW313_RS03020 PF00677 Lumazine binding domain NW313_RS03025 PF00925 GTP cyclohydrolase II NW313_RS03025 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NW313_RS03030 PF00885 6,7-dimethyl-8-ribityllumazine synthase NW313_RS03035 PF01029 NusB family NW313_RS03040 PF00586 AIR synthase related protein, N-terminal domain NW313_RS03040 PF02769 AIR synthase related protein, C-terminal domain NW313_RS03045 PF04608 Phosphatidylglycerophosphatase A NW313_RS03050 PF11944 Protein of unknown function (DUF3461) NW313_RS03055 PF08335 GlnD PII-uridylyltransferase NW313_RS03055 PF01966 HD domain NW313_RS03055 PF01909 Nucleotidyltransferase domain NW313_RS03060 PF00557 Metallopeptidase family M24 NW313_RS03065 PF00318 Ribosomal protein S2 NW313_RS03070 PF00889 Elongation factor TS NW313_RS03075 PF00696 Amino acid kinase family NW313_RS03080 PF01765 Ribosome recycling factor NW313_RS03085 PF01255 Putative undecaprenyl diphosphate synthase NW313_RS03095 PF13288 DXP reductoisomerase C-terminal domain NW313_RS03095 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NW313_RS03095 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NW313_RS03100 PF02163 Peptidase family M50 NW313_RS03100 PF17820 PDZ domain NW313_RS03105 PF01103 Surface antigen NW313_RS03105 PF07244 Surface antigen variable number repeat NW313_RS03110 PF03938 Outer membrane protein (OmpH-like) NW313_RS03115 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS03115 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NW313_RS03120 PF07977 FabA-like domain NW313_RS03125 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NW313_RS03125 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS03130 PF02684 Lipid-A-disaccharide synthetase NW313_RS03135 PF01351 Ribonuclease HII NW313_RS03140 PF14579 Helix-hairpin-helix motif NW313_RS03140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NW313_RS03140 PF07733 Bacterial DNA polymerase III alpha NTPase domain NW313_RS03140 PF02811 PHP domain NW313_RS03140 PF01336 OB-fold nucleic acid binding domain NW313_RS03145 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NW313_RS03150 PF11734 TilS substrate C-terminal domain NW313_RS03150 PF09179 TilS substrate binding domain NW313_RS03150 PF01171 PP-loop family NW313_RS03155 PF00034 Cytochrome c NW313_RS03160 PF05870 Phenolic acid decarboxylase (PAD) NW313_RS03165 PF00543 Nitrogen regulatory protein P-II NW313_RS03170 PF03372 Endonuclease/Exonuclease/phosphatase family NW313_RS03175 PF01464 Transglycosylase SLT domain NW313_RS03175 PF01476 LysM domain NW313_RS03180 PF16123 Hydroxyacylglutathione hydrolase C-terminus NW313_RS03180 PF00753 Metallo-beta-lactamase superfamily NW313_RS03185 PF08241 Methyltransferase domain NW313_RS03190 PF00075 RNase H NW313_RS03195 PF00929 Exonuclease NW313_RS03205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW313_RS03205 PF02770 Acyl-CoA dehydrogenase, middle domain NW313_RS03205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW313_RS03205 PF09317 Domain of unknown function (DUF1974) NW313_RS03210 PF13580 SIS domain NW313_RS03215 PF13230 Glutamine amidotransferases class-II NW313_RS03220 PF00551 Formyl transferase NW313_RS03225 PF00586 AIR synthase related protein, N-terminal domain NW313_RS03225 PF02769 AIR synthase related protein, C-terminal domain NW313_RS03235 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS03240 PF01479 S4 domain NW313_RS03240 PF00849 RNA pseudouridylate synthase NW313_RS03245 PF01713 Smr domain NW313_RS03260 PF01963 TraB family NW313_RS03265 PF02838 Glycosyl hydrolase family 20, domain 2 NW313_RS03265 PF00728 Glycosyl hydrolase family 20, catalytic domain NW313_RS03265 PF03173 Putative carbohydrate binding domain NW313_RS03265 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NW313_RS03275 PF00403 Heavy-metal-associated domain NW313_RS03280 PF00749 tRNA synthetases class I (E and Q), catalytic domain NW313_RS03285 PF01389 OmpA-like transmembrane domain NW313_RS03285 PF00691 OmpA family NW313_RS03300 PF07715 TonB-dependent Receptor Plug Domain NW313_RS03305 PF08021 Siderophore-interacting FAD-binding domain NW313_RS03305 PF04954 Siderophore-interacting protein NW313_RS03310 PF00501 AMP-binding enzyme NW313_RS03310 PF00668 Condensation domain NW313_RS03310 PF08242 Methyltransferase domain NW313_RS03310 PF00550 Phosphopantetheine attachment site NW313_RS03345 PF00072 Response regulator receiver domain NW313_RS03345 PF01584 CheW-like domain NW313_RS03350 PF01739 CheR methyltransferase, SAM binding domain NW313_RS03350 PF03705 CheR methyltransferase, all-alpha domain NW313_RS03355 PF00460 Flagella basal body rod protein NW313_RS03360 PF00460 Flagella basal body rod protein NW313_RS03360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW313_RS03365 PF13861 FlgD Tudor-like domain NW313_RS03365 PF13860 FlgD Ig-like domain NW313_RS03365 PF03963 Flagellar hook capping protein - N-terminal region NW313_RS03370 PF07559 Flagellar basal body protein FlaE NW313_RS03370 PF00460 Flagella basal body rod protein NW313_RS03370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW313_RS03375 PF00460 Flagella basal body rod protein NW313_RS03375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW313_RS03380 PF00460 Flagella basal body rod protein NW313_RS03380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW313_RS03385 PF02107 Flagellar L-ring protein NW313_RS03390 PF02119 Flagellar P-ring protein NW313_RS03395 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NW313_RS03395 PF10135 Rod binding protein NW313_RS03400 PF07196 Flagellin hook IN motif NW313_RS03400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW313_RS03410 PF00700 Bacterial flagellin C-terminal helical region NW313_RS03410 PF00669 Bacterial flagellin N-terminal helical region NW313_RS03410 PF07196 Flagellin hook IN motif NW313_RS03415 PF00700 Bacterial flagellin C-terminal helical region NW313_RS03415 PF07196 Flagellin hook IN motif NW313_RS03415 PF00669 Bacterial flagellin N-terminal helical region NW313_RS03500 PF06071 Protein of unknown function (DUF933) NW313_RS03500 PF01926 50S ribosome-binding GTPase NW313_RS03505 PF01195 Peptidyl-tRNA hydrolase NW313_RS03510 PF14572 Phosphoribosyl synthetase-associated domain NW313_RS03510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NW313_RS03515 PF08544 GHMP kinases C terminal NW313_RS03515 PF00288 GHMP kinases N terminal domain NW313_RS03520 PF03550 Outer membrane lipoprotein LolB NW313_RS03525 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NW313_RS03525 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NW313_RS03525 PF01488 Shikimate / quinate 5-dehydrogenase NW313_RS03530 PF03462 PCRF domain NW313_RS03530 PF00472 RF-1 domain NW313_RS03535 PF17827 PrmC N-terminal domain NW313_RS03535 PF13847 Methyltransferase domain NW313_RS03540 PF04247 Invasion gene expression up-regulator, SirB NW313_RS03545 PF13369 Transglutaminase-like superfamily NW313_RS03550 PF00793 DAHP synthetase I family NW313_RS03555 PF02872 5'-nucleotidase, C-terminal domain NW313_RS03555 PF00149 Calcineurin-like phosphoesterase NW313_RS03560 PF04073 Aminoacyl-tRNA editing domain NW313_RS03565 PF00860 Permease family NW313_RS03580 PF03358 NADPH-dependent FMN reductase NW313_RS03585 PF03960 ArsC family NW313_RS03590 PF01435 Peptidase family M48 NW313_RS03590 PF13181 Tetratricopeptide repeat NW313_RS03600 PF01594 AI-2E family transporter NW313_RS03605 PF02743 Cache domain NW313_RS03605 PF00672 HAMP domain NW313_RS03605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS03610 PF00578 AhpC/TSA family NW313_RS03620 PF00701 Dihydrodipicolinate synthetase family NW313_RS03625 PF06804 NlpB/DapX lipoprotein NW313_RS03635 PF02557 D-alanyl-D-alanine carboxypeptidase NW313_RS03640 PF07687 Peptidase dimerisation domain NW313_RS03640 PF01546 Peptidase family M20/M25/M40 NW313_RS03645 PF03960 ArsC family NW313_RS03660 PF11143 Protein of unknown function (DUF2919) NW313_RS03665 PF04261 Dyp-type peroxidase family NW313_RS03670 PF00700 Bacterial flagellin C-terminal helical region NW313_RS03670 PF07196 Flagellin hook IN motif NW313_RS03670 PF00669 Bacterial flagellin N-terminal helical region NW313_RS03675 PF00669 Bacterial flagellin N-terminal helical region NW313_RS03675 PF00700 Bacterial flagellin C-terminal helical region NW313_RS03675 PF07196 Flagellin hook IN motif NW313_RS03680 PF00700 Bacterial flagellin C-terminal helical region NW313_RS03680 PF07196 Flagellin hook IN motif NW313_RS03680 PF00669 Bacterial flagellin N-terminal helical region NW313_RS03685 PF03646 FlaG protein NW313_RS03690 PF07196 Flagellin hook IN motif NW313_RS03690 PF07195 Flagellar hook-associated protein 2 C-terminus NW313_RS03690 PF02465 Flagellar hook-associated protein 2 N-terminus NW313_RS03700 PF02561 Flagellar protein FliS NW313_RS03705 PF06490 Flagellar regulatory protein FleQ NW313_RS03705 PF00158 Sigma-54 interaction domain NW313_RS03705 PF02954 Bacterial regulatory protein, Fis family NW313_RS03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS03710 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS03710 PF13188 PAS domain NW313_RS03715 PF02954 Bacterial regulatory protein, Fis family NW313_RS03715 PF00072 Response regulator receiver domain NW313_RS03715 PF00158 Sigma-54 interaction domain NW313_RS03720 PF02049 Flagellar hook-basal body complex protein FliE NW313_RS03725 PF01514 Secretory protein of YscJ/FliF family NW313_RS03725 PF08345 Flagellar M-ring protein C-terminal NW313_RS03730 PF01706 FliG C-terminal domain NW313_RS03730 PF14841 FliG middle domain NW313_RS03730 PF14842 FliG N-terminal domain NW313_RS03735 PF02108 Flagellar assembly protein FliH NW313_RS03740 PF18269 T3SS EscN ATPase C-terminal domain NW313_RS03740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW313_RS03760 PF03748 Flagellar basal body-associated protein FliL NW313_RS03765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NW313_RS03765 PF02154 Flagellar motor switch protein FliM NW313_RS03770 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NW313_RS03775 PF04347 Flagellar biosynthesis protein, FliO NW313_RS03780 PF00813 FliP family NW313_RS03785 PF01313 Bacterial export proteins, family 3 NW313_RS03790 PF01311 Bacterial export proteins, family 1 NW313_RS03795 PF01312 FlhB HrpN YscU SpaS Family NW313_RS03800 PF01713 Smr domain NW313_RS03805 PF05175 Methyltransferase small domain NW313_RS03810 PF01264 Chorismate synthase NW313_RS03815 PF03458 UPF0126 domain NW313_RS03820 PF04315 Elongation factor P hydroxylase NW313_RS03825 PF08891 YfcL protein NW313_RS03830 PF03358 NADPH-dependent FMN reductase NW313_RS03835 PF01266 FAD dependent oxidoreductase NW313_RS03835 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NW313_RS03840 PF00109 Beta-ketoacyl synthase, N-terminal domain NW313_RS03840 PF02801 Beta-ketoacyl synthase, C-terminal domain NW313_RS03845 PF11890 Domain of unknown function (DUF3410) NW313_RS03845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW313_RS03845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NW313_RS03850 PF01118 Semialdehyde dehydrogenase, NAD binding domain NW313_RS03850 PF02774 Semialdehyde dehydrogenase, dimerisation domain NW313_RS03855 PF01475 Ferric uptake regulator family NW313_RS03865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS03865 PF03466 LysR substrate binding domain NW313_RS03870 PF03788 LrgA family NW313_RS03875 PF04172 LrgB-like family NW313_RS03880 PF00258 Flavodoxin NW313_RS03890 PF12697 Alpha/beta hydrolase family NW313_RS03895 PF03925 SeqA protein C-terminal domain NW313_RS03895 PF17206 SeqA protein N-terminal domain NW313_RS03900 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NW313_RS03900 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NW313_RS03900 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NW313_RS03900 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NW313_RS03910 PF01784 NIF3 (NGG1p interacting factor 3) NW313_RS03915 PF00285 Citrate synthase, C-terminal domain NW313_RS03920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NW313_RS03925 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NW313_RS03930 PF00890 FAD binding domain NW313_RS03930 PF02910 Fumarate reductase flavoprotein C-term NW313_RS03935 PF13085 2Fe-2S iron-sulfur cluster binding domain NW313_RS03940 PF02779 Transketolase, pyrimidine binding domain NW313_RS03940 PF16870 2-oxoglutarate dehydrogenase C-terminal NW313_RS03940 PF00676 Dehydrogenase E1 component NW313_RS03940 PF16078 2-oxoglutarate dehydrogenase N-terminus NW313_RS03945 PF02817 e3 binding domain NW313_RS03945 PF00364 Biotin-requiring enzyme NW313_RS03945 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NW313_RS03950 PF08442 ATP-grasp domain NW313_RS03950 PF00549 CoA-ligase NW313_RS03955 PF02629 CoA binding domain NW313_RS03955 PF00549 CoA-ligase NW313_RS03960 PF00950 ABC 3 transport family NW313_RS03965 PF00005 ABC transporter NW313_RS03970 PF01297 Zinc-uptake complex component A periplasmic NW313_RS03975 PF02311 AraC-like ligand binding domain NW313_RS03975 PF12833 Helix-turn-helix domain NW313_RS03980 PF04023 FeoA domain NW313_RS03985 PF02421 Ferrous iron transport protein B NW313_RS03985 PF07664 Ferrous iron transport protein B C terminus NW313_RS03985 PF07670 Nucleoside recognition NW313_RS04000 PF00750 tRNA synthetases class I (R) NW313_RS04000 PF05746 DALR anticodon binding domain NW313_RS04000 PF03485 Arginyl tRNA synthetase N terminal domain NW313_RS04010 PF00675 Insulinase (Peptidase family M16) NW313_RS04010 PF05193 Peptidase M16 inactive domain NW313_RS04015 PF00300 Histidine phosphatase superfamily (branch 1) NW313_RS04020 PF00771 FHIPEP family NW313_RS04025 PF00448 SRP54-type protein, GTPase domain NW313_RS04030 PF10609 NUBPL iron-transfer P-loop NTPase NW313_RS04035 PF04542 Sigma-70 region 2 NW313_RS04035 PF04545 Sigma-70, region 4 NW313_RS04035 PF04539 Sigma-70 region 3 NW313_RS04040 PF00072 Response regulator receiver domain NW313_RS04045 PF04344 Chemotaxis phosphatase, CheZ NW313_RS04050 PF01584 CheW-like domain NW313_RS04050 PF02895 Signal transducing histidine kinase, homodimeric domain NW313_RS04050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS04050 PF00072 Response regulator receiver domain NW313_RS04050 PF01627 Hpt domain NW313_RS04055 PF01339 CheB methylesterase NW313_RS04055 PF00072 Response regulator receiver domain NW313_RS04060 PF13614 AAA domain NW313_RS04070 PF01584 CheW-like domain NW313_RS04080 PF00005 ABC transporter NW313_RS04085 PF03379 CcmB protein NW313_RS04090 PF01578 Cytochrome C assembly protein NW313_RS04095 PF04995 Heme exporter protein D (CcmD) NW313_RS04100 PF03100 CcmE NW313_RS04105 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NW313_RS04105 PF01578 Cytochrome C assembly protein NW313_RS04110 PF08534 Redoxin NW313_RS04115 PF03918 Cytochrome C biogenesis protein NW313_RS04125 PF04333 MlaA lipoprotein NW313_RS04140 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NW313_RS04140 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NW313_RS04145 PF00462 Glutaredoxin NW313_RS04150 PF01131 DNA topoisomerase NW313_RS04150 PF01751 Toprim domain NW313_RS04155 PF00850 Histone deacetylase domain NW313_RS04170 PF11893 Domain of unknown function (DUF3413) NW313_RS04170 PF00884 Sulfatase NW313_RS04175 PF07208 Protein of unknown function (DUF1414) NW313_RS04180 PF04245 37-kD nucleoid-associated bacterial protein NW313_RS04190 PF03553 Na+/H+ antiporter family NW313_RS04195 PF01118 Semialdehyde dehydrogenase, NAD binding domain NW313_RS04195 PF02774 Semialdehyde dehydrogenase, dimerisation domain NW313_RS04200 PF01914 MarC family integral membrane protein NW313_RS04205 PF00171 Aldehyde dehydrogenase family NW313_RS04205 PF00465 Iron-containing alcohol dehydrogenase NW313_RS04215 PF00916 Sulfate permease family NW313_RS04215 PF01740 STAS domain NW313_RS04220 PF12111 Polyribonucleotide phosphorylase C terminal NW313_RS04220 PF10150 Ribonuclease E/G family NW313_RS04220 PF00575 S1 RNA binding domain NW313_RS04225 PF00849 RNA pseudouridylate synthase NW313_RS04225 PF01479 S4 domain NW313_RS04230 PF02545 Maf-like protein NW313_RS04235 PF02620 Large ribosomal RNA subunit accumulation protein YceD NW313_RS04240 PF01783 Ribosomal L32p protein family NW313_RS04245 PF02504 Fatty acid synthesis protein NW313_RS04250 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NW313_RS04250 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NW313_RS04255 PF00698 Acyl transferase domain NW313_RS04265 PF00550 Phosphopantetheine attachment site NW313_RS04270 PF02801 Beta-ketoacyl synthase, C-terminal domain NW313_RS04270 PF00109 Beta-ketoacyl synthase, N-terminal domain NW313_RS04275 PF01063 Amino-transferase class IV NW313_RS04280 PF02618 YceG-like family NW313_RS04285 PF02223 Thymidylate kinase NW313_RS04290 PF09115 DNA polymerase III, delta subunit, C terminal NW313_RS04295 PF01026 TatD related DNase NW313_RS04300 PF00367 phosphotransferase system, EIIB NW313_RS04300 PF02378 Phosphotransferase system, EIIC NW313_RS04310 PF00209 Sodium:neurotransmitter symporter family NW313_RS04325 PF01734 Patatin-like phospholipase NW313_RS04330 PF00224 Pyruvate kinase, barrel domain NW313_RS04330 PF02887 Pyruvate kinase, alpha/beta domain NW313_RS04335 PF00480 ROK family NW313_RS04340 PF01584 CheW-like domain NW313_RS04340 PF00072 Response regulator receiver domain NW313_RS04355 PF13847 Methyltransferase domain NW313_RS04365 PF01263 Aldose 1-epimerase NW313_RS04370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NW313_RS04370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NW313_RS04375 PF01641 SelR domain NW313_RS04385 PF07023 Protein of unknown function (DUF1315) NW313_RS04390 PF17763 Glutaminase/Asparaginase C-terminal domain NW313_RS04390 PF00710 Asparaginase, N-terminal NW313_RS04395 PF01343 Peptidase family S49 NW313_RS04400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NW313_RS04400 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS04405 PF01842 ACT domain NW313_RS04405 PF00551 Formyl transferase NW313_RS04415 PF13307 Helicase C-terminal domain NW313_RS04415 PF04851 Type III restriction enzyme, res subunit NW313_RS04420 PF00814 Glycoprotease family NW313_RS04435 PF00561 alpha/beta hydrolase fold NW313_RS04440 PF13193 AMP-binding enzyme C-terminal domain NW313_RS04440 PF00501 AMP-binding enzyme NW313_RS04445 PF01612 3'-5' exonuclease NW313_RS04445 PF00570 HRDC domain NW313_RS04465 PF01966 HD domain NW313_RS04465 PF13286 Phosphohydrolase-associated domain NW313_RS04475 PF00155 Aminotransferase class I and II NW313_RS04480 PF00425 chorismate binding enzyme NW313_RS04485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW313_RS04485 PF16582 Middle domain of thiamine pyrophosphate NW313_RS04485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW313_RS04490 PF12697 Alpha/beta hydrolase family NW313_RS04495 PF00378 Enoyl-CoA hydratase/isomerase NW313_RS04500 PF13378 Enolase C-terminal domain-like NW313_RS04505 PF00501 AMP-binding enzyme NW313_RS04505 PF13193 AMP-binding enzyme C-terminal domain NW313_RS04510 PF03594 Benzoate membrane transport protein NW313_RS04515 PF07883 Cupin domain NW313_RS04515 PF01381 Helix-turn-helix NW313_RS04520 PF12729 Four helix bundle sensory module for signal transduction NW313_RS04520 PF00672 HAMP domain NW313_RS04520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS04530 PF07690 Major Facilitator Superfamily NW313_RS04550 PF04170 NlpE N-terminal domain NW313_RS04555 PF03776 Septum formation topological specificity factor MinE NW313_RS04560 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NW313_RS04565 PF05209 Septum formation inhibitor MinC, N-terminal domain NW313_RS04565 PF03775 Septum formation inhibitor MinC, C-terminal domain NW313_RS04570 PF05166 YcgL domain NW313_RS04575 PF13406 Transglycosylase SLT domain NW313_RS04580 PF03466 LysR substrate binding domain NW313_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS04585 PF07670 Nucleoside recognition NW313_RS04585 PF07662 Na+ dependent nucleoside transporter C-terminus NW313_RS04585 PF01773 Na+ dependent nucleoside transporter N-terminus NW313_RS04590 PF00704 Glycosyl hydrolases family 18 NW313_RS04595 PF03264 NapC/NirT cytochrome c family, N-terminal region NW313_RS04600 PF00384 Molybdopterin oxidoreductase NW313_RS04600 PF18364 Molybdopterin oxidoreductase N-terminal domain NW313_RS04600 PF01568 Molydopterin dinucleotide binding domain NW313_RS04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS04610 PF03466 LysR substrate binding domain NW313_RS04615 PF01494 FAD binding domain NW313_RS04620 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NW313_RS04625 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NW313_RS04625 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NW313_RS04670 PF00563 EAL domain NW313_RS04670 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS04670 PF03707 Bacterial signalling protein N terminal repeat NW313_RS04670 PF13188 PAS domain NW313_RS04680 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NW313_RS04685 PF03480 Bacterial extracellular solute-binding protein, family 7 NW313_RS04690 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NW313_RS04695 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NW313_RS04700 PF02954 Bacterial regulatory protein, Fis family NW313_RS04700 PF00158 Sigma-54 interaction domain NW313_RS04700 PF00072 Response regulator receiver domain NW313_RS04705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS04705 PF02743 Cache domain NW313_RS04705 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS04715 PF05698 Bacterial trigger factor protein (TF) C-terminus NW313_RS04715 PF05697 Bacterial trigger factor protein (TF) NW313_RS04715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NW313_RS04720 PF00574 Clp protease NW313_RS04725 PF07724 AAA domain (Cdc48 subfamily) NW313_RS04725 PF10431 C-terminal, D2-small domain, of ClpB protein NW313_RS04725 PF06689 ClpX C4-type zinc finger NW313_RS04730 PF05362 Lon protease (S16) C-terminal proteolytic domain NW313_RS04730 PF02190 ATP-dependent protease La (LON) substrate-binding domain NW313_RS04730 PF00004 ATPase family associated with various cellular activities (AAA) NW313_RS04735 PF00216 Bacterial DNA-binding protein NW313_RS04740 PF13145 PPIC-type PPIASE domain NW313_RS04750 PF02224 Cytidylate kinase NW313_RS04755 PF00575 S1 RNA binding domain NW313_RS04760 PF00216 Bacterial DNA-binding protein NW313_RS04765 PF06305 Lipopolysaccharide assembly protein A domain NW313_RS04770 PF18073 Rubredoxin metal binding domain NW313_RS04775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NW313_RS04780 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) NW313_RS04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS04790 PF03466 LysR substrate binding domain NW313_RS04800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NW313_RS04800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NW313_RS04805 PF01037 Lrp/AsnC ligand binding domain NW313_RS04810 PF01580 FtsK/SpoIIIE family NW313_RS04810 PF17854 FtsK alpha domain NW313_RS04810 PF09397 Ftsk gamma domain NW313_RS04810 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NW313_RS04815 PF02600 Disulfide bond formation protein DsbB NW313_RS04820 PF06450 Bacterial Na+/H+ antiporter B (NhaB) NW313_RS04825 PF07840 FadR C-terminal domain NW313_RS04825 PF00392 Bacterial regulatory proteins, gntR family NW313_RS04835 PF00672 HAMP domain NW313_RS04835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS04840 PF01230 HIT domain NW313_RS04855 PF13036 Peptidoglycan-synthase activator LpoB NW313_RS04855 PF08139 Prokaryotic membrane lipoprotein lipid attachment site NW313_RS04865 PF05728 Uncharacterised protein family (UPF0227) NW313_RS04870 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS04880 PF16458 Beta-prism lectin NW313_RS04880 PF12563 Hemolytic toxin N terminal NW313_RS04880 PF07968 Leukocidin/Hemolysin toxin family NW313_RS04890 PF02559 CarD-like/TRCF domain NW313_RS04890 PF00270 DEAD/DEAH box helicase NW313_RS04890 PF00271 Helicase conserved C-terminal domain NW313_RS04890 PF03461 TRCF domain NW313_RS04890 PF17757 UvrB interaction domain NW313_RS04900 PF02687 FtsX-like permease family NW313_RS04900 PF12704 MacB-like periplasmic core domain NW313_RS04905 PF00005 ABC transporter NW313_RS04910 PF12704 MacB-like periplasmic core domain NW313_RS04910 PF02687 FtsX-like permease family NW313_RS04920 PF03772 Competence protein NW313_RS04920 PF13567 Domain of unknown function (DUF4131) NW313_RS04920 PF00753 Metallo-beta-lactamase superfamily NW313_RS04925 PF00664 ABC transporter transmembrane region NW313_RS04925 PF00005 ABC transporter NW313_RS04930 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NW313_RS04935 PF03966 Trm112p-like protein NW313_RS04940 PF02348 Cytidylyltransferase NW313_RS04945 PF04293 SpoVR like protein NW313_RS04950 PF04285 Protein of unknown function (DUF444) NW313_RS04955 PF06798 PrkA serine protein kinase C-terminal domain NW313_RS04955 PF08298 PrkA AAA domain NW313_RS04960 PF03887 YfbU domain NW313_RS04970 PF04055 Radical SAM superfamily NW313_RS04975 PF02743 Cache domain NW313_RS04975 PF00672 HAMP domain NW313_RS04975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS04985 PF01228 Glycine radical NW313_RS04985 PF02901 Pyruvate formate lyase-like NW313_RS04995 PF00005 ABC transporter NW313_RS05000 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW313_RS05005 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS05010 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS05015 PF03372 Endonuclease/Exonuclease/phosphatase family NW313_RS05020 PF00672 HAMP domain NW313_RS05020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS05025 PF10689 Protein of unknown function (DUF2496) NW313_RS05030 PF07445 Primosomal replication protein priC NW313_RS05035 PF01925 Sulfite exporter TauE/SafE NW313_RS05040 PF06733 DEAD_2 NW313_RS05040 PF13307 Helicase C-terminal domain NW313_RS05045 PF13609 Gram-negative porin NW313_RS05050 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NW313_RS05055 PF02810 SEC-C motif NW313_RS05060 PF08668 HDOD domain NW313_RS05060 PF00563 EAL domain NW313_RS05065 PF00149 Calcineurin-like phosphoesterase NW313_RS05070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NW313_RS05075 PF01406 tRNA synthetases class I (C) catalytic domain NW313_RS05075 PF09190 DALR domain NW313_RS05080 PF02075 Crossover junction endodeoxyribonuclease RuvC NW313_RS05085 PF01330 RuvA N terminal domain NW313_RS05085 PF07499 RuvA, C-terminal domain NW313_RS05090 PF05491 RuvB C-terminal winged helix domain NW313_RS05090 PF05496 Holliday junction DNA helicase RuvB P-loop domain NW313_RS05090 PF17864 RuvB AAA lid domain NW313_RS05095 PF01654 Cytochrome bd terminal oxidase subunit I NW313_RS05100 PF02322 Cytochrome bd terminal oxidase subunit II NW313_RS05105 PF08173 Membrane bound YbgT-like protein NW313_RS05115 PF03061 Thioesterase superfamily NW313_RS05120 PF01618 MotA/TolQ/ExbB proton channel family NW313_RS05125 PF02472 Biopolymer transport protein ExbD/TolR NW313_RS05135 PF04052 TolB amino-terminal domain NW313_RS05135 PF07676 WD40-like Beta Propeller Repeat NW313_RS05140 PF00691 OmpA family NW313_RS05150 PF02445 Quinolinate synthetase A protein NW313_RS05160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS05160 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS05160 PF09308 LuxQ, periplasmic NW313_RS05160 PF00072 Response regulator receiver domain NW313_RS05165 PF06610 L-alanine exporter NW313_RS05170 PF01238 Phosphomannose isomerase type I NW313_RS05175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NW313_RS05175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NW313_RS05175 PF02378 Phosphotransferase system, EIIC NW313_RS05180 PF12833 Helix-turn-helix domain NW313_RS05190 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NW313_RS05210 PF00171 Aldehyde dehydrogenase family NW313_RS05215 PF01590 GAF domain NW313_RS05215 PF02954 Bacterial regulatory protein, Fis family NW313_RS05215 PF00158 Sigma-54 interaction domain NW313_RS05220 PF09905 DNA-binding protein VF530 NW313_RS05230 PF03441 FAD binding domain of DNA photolyase NW313_RS05230 PF00875 DNA photolyase NW313_RS05315 PF00005 ABC transporter NW313_RS05375 PF04002 RadC-like JAB domain NW313_RS05385 PF13088 BNR repeat-like domain NW313_RS05385 PF09264 Vibrio cholerae sialidase, lectin insertion NW313_RS05390 PF01979 Amidohydrolase family NW313_RS05395 PF00480 ROK family NW313_RS05400 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase NW313_RS05405 PF03480 Bacterial extracellular solute-binding protein, family 7 NW313_RS05410 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component NW313_RS05415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NW313_RS05420 PF00701 Dihydrodipicolinate synthetase family NW313_RS05425 PF01380 SIS domain NW313_RS05425 PF01418 Helix-turn-helix domain, rpiR family NW313_RS05430 PF01344 Kelch motif NW313_RS05435 PF07646 Kelch motif NW313_RS05455 PF02384 N-6 DNA Methylase NW313_RS05475 PF11867 Domain of unknown function (DUF3387) NW313_RS05475 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) NW313_RS05475 PF18766 SWI2/SNF2 ATPase NW313_RS05495 PF00176 SNF2 family N-terminal domain NW313_RS05495 PF12419 SNF2 Helicase protein NW313_RS05495 PF00271 Helicase conserved C-terminal domain NW313_RS05500 PF00589 Phage integrase family NW313_RS05500 PF13356 Arm DNA-binding domain NW313_RS05505 PF13356 Arm DNA-binding domain NW313_RS05505 PF00589 Phage integrase family NW313_RS05515 PF00873 AcrB/AcrD/AcrF family NW313_RS05520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW313_RS05530 PF02470 MlaD protein NW313_RS05535 PF04403 Paraquat-inducible protein A NW313_RS05540 PF05552 Conserved TM helix NW313_RS05540 PF00924 Mechanosensitive ion channel NW313_RS05560 PF00440 Bacterial regulatory proteins, tetR family NW313_RS05560 PF08362 YcdC-like protein, C-terminal region NW313_RS05565 PF00171 Aldehyde dehydrogenase family NW313_RS05570 PF07383 Protein of unknown function (DUF1496) NW313_RS05585 PF16295 Tetracyclin repressor-like, C-terminal domain NW313_RS05585 PF00440 Bacterial regulatory proteins, tetR family NW313_RS05590 PF02770 Acyl-CoA dehydrogenase, middle domain NW313_RS05590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW313_RS05590 PF09317 Domain of unknown function (DUF1974) NW313_RS05590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW313_RS05595 PF12241 Trans-2-enoyl-CoA reductase catalytic region NW313_RS05595 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NW313_RS05595 PF07055 Enoyl reductase FAD binding domain NW313_RS05600 PF01176 Translation initiation factor 1A / IF-1 NW313_RS05605 PF04376 Arginine-tRNA-protein transferase, N terminus NW313_RS05605 PF04377 Arginine-tRNA-protein transferase, C terminus NW313_RS05610 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NW313_RS05615 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NW313_RS05620 PF10692 Protein of unknown function (DUF2498) NW313_RS05625 PF08272 Topoisomerase I zinc-ribbon-like NW313_RS05625 PF01396 Topoisomerase DNA binding C4 zinc finger NW313_RS05625 PF01751 Toprim domain NW313_RS05625 PF01131 DNA topoisomerase NW313_RS05630 PF00483 Nucleotidyl transferase NW313_RS05635 PF08323 Starch synthase catalytic domain NW313_RS05635 PF00534 Glycosyl transferases group 1 NW313_RS05655 PF04993 TfoX N-terminal domain NW313_RS05655 PF04994 TfoX C-terminal domain NW313_RS05660 PF00356 Bacterial regulatory proteins, lacI family NW313_RS05665 PF02613 Nitrate reductase delta subunit NW313_RS05670 PF00072 Response regulator receiver domain NW313_RS05670 PF00486 Transcriptional regulatory protein, C terminal NW313_RS05675 PF02698 DUF218 domain NW313_RS05680 PF13847 Methyltransferase domain NW313_RS05685 PF17193 MukF C-terminal domain NW313_RS05685 PF03882 MukF winged-helix domain NW313_RS05685 PF17192 MukF middle domain NW313_RS05690 PF04288 MukE-like family NW313_RS05695 PF16330 MukB hinge domain NW313_RS05695 PF04310 MukB N-terminal NW313_RS05700 PF01037 Lrp/AsnC ligand binding domain NW313_RS05705 PF01810 LysE type translocator NW313_RS05710 PF08497 Radical SAM N-terminal NW313_RS05710 PF04055 Radical SAM superfamily NW313_RS05710 PF11842 Domain of unknown function (DUF3362) NW313_RS05715 PF08447 PAS fold NW313_RS05715 PF08448 PAS fold NW313_RS05715 PF00563 EAL domain NW313_RS05715 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS05720 PF00675 Insulinase (Peptidase family M16) NW313_RS05720 PF05193 Peptidase M16 inactive domain NW313_RS05735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS05735 PF03466 LysR substrate binding domain NW313_RS05740 PF08267 Cobalamin-independent synthase, N-terminal domain NW313_RS05740 PF01717 Cobalamin-independent synthase, Catalytic domain NW313_RS05750 PF03795 YCII-related domain NW313_RS05755 PF03061 Thioesterase superfamily NW313_RS05760 PF04279 Intracellular septation protein A NW313_RS05770 PF02698 DUF218 domain NW313_RS05775 PF01370 NAD dependent epimerase/dehydratase family NW313_RS05785 PF01226 Formate/nitrite transporter NW313_RS05795 PF06796 Periplasmic nitrate reductase protein NapE NW313_RS05800 PF03264 NapC/NirT cytochrome c family, N-terminal region NW313_RS05805 PF00384 Molybdopterin oxidoreductase NW313_RS05805 PF18364 Molybdopterin oxidoreductase N-terminal domain NW313_RS05805 PF01568 Molydopterin dinucleotide binding domain NW313_RS05825 PF01368 DHH family NW313_RS05825 PF02833 DHHA2 domain NW313_RS05840 PF00005 ABC transporter NW313_RS05845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW313_RS05845 PF00005 ABC transporter NW313_RS05850 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS05850 PF12911 N-terminal TM domain of oligopeptide transport permease C NW313_RS05855 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS05860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW313_RS05865 PF02954 Bacterial regulatory protein, Fis family NW313_RS05865 PF00158 Sigma-54 interaction domain NW313_RS05870 PF04012 PspA/IM30 family NW313_RS05885 PF00529 HlyD membrane-fusion protein of T1SS NW313_RS05885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW313_RS05890 PF13533 Biotin-lipoyl like NW313_RS05895 PF00873 AcrB/AcrD/AcrF family NW313_RS05900 PF03352 Methyladenine glycosylase NW313_RS05905 PF01053 Cys/Met metabolism PLP-dependent enzyme NW313_RS05910 PF13396 Phospholipase_D-nuclease N-terminal NW313_RS05910 PF13091 PLD-like domain NW313_RS05915 PF00209 Sodium:neurotransmitter symporter family NW313_RS05920 PF00849 RNA pseudouridylate synthase NW313_RS05925 PF01066 CDP-alcohol phosphatidyltransferase NW313_RS05930 PF00005 ABC transporter NW313_RS05935 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS05940 PF13416 Bacterial extracellular solute-binding protein NW313_RS05950 PF06945 Protein of unknown function (DUF1289) NW313_RS05965 PF00005 ABC transporter NW313_RS05970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW313_RS05975 PF03222 Tryptophan/tyrosine permease family NW313_RS05985 PF00571 CBS domain NW313_RS05985 PF01769 Divalent cation transporter NW313_RS05985 PF03448 MgtE intracellular N domain NW313_RS05990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS05990 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS05990 PF00072 Response regulator receiver domain NW313_RS05990 PF09308 LuxQ, periplasmic NW313_RS05995 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS05995 PF03707 Bacterial signalling protein N terminal repeat NW313_RS05995 PF00563 EAL domain NW313_RS06005 PF08453 Peptidase family M9 N-terminal NW313_RS06005 PF01752 Collagenase NW313_RS06005 PF04151 Bacterial pre-peptidase C-terminal domain NW313_RS06015 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW313_RS06015 PF12793 Sugar transport-related sRNA regulator N-term NW313_RS06035 PF12729 Four helix bundle sensory module for signal transduction NW313_RS06035 PF00672 HAMP domain NW313_RS06035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS06045 PF00360 Phytochrome region NW313_RS06045 PF00563 EAL domain NW313_RS06045 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS06045 PF01590 GAF domain NW313_RS06050 PF01386 Ribosomal L25p family NW313_RS06055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS06060 PF00486 Transcriptional regulatory protein, C terminal NW313_RS06060 PF00072 Response regulator receiver domain NW313_RS06070 PF00271 Helicase conserved C-terminal domain NW313_RS06070 PF04851 Type III restriction enzyme, res subunit NW313_RS06075 PF00849 RNA pseudouridylate synthase NW313_RS06075 PF01479 S4 domain NW313_RS06080 PF07690 Major Facilitator Superfamily NW313_RS06090 PF11066 Protein of unknown function (DUF2867) NW313_RS06090 PF13460 NAD(P)H-binding NW313_RS06095 PF01554 MatE NW313_RS06100 PF00005 ABC transporter NW313_RS06105 PF02687 FtsX-like permease family NW313_RS06105 PF12704 MacB-like periplasmic core domain NW313_RS06115 PF06965 Na+/H+ antiporter 1 NW313_RS06120 PF00202 Aminotransferase class-III NW313_RS06125 PF16653 Saccharopine dehydrogenase C-terminal domain NW313_RS06125 PF03435 Saccharopine dehydrogenase NADP binding domain NW313_RS06135 PF00691 OmpA family NW313_RS06135 PF05736 OprF membrane domain NW313_RS06140 PF02321 Outer membrane efflux protein NW313_RS06165 PF03466 LysR substrate binding domain NW313_RS06165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS06175 PF01863 Protein of unknown function DUF45 NW313_RS06180 PF05971 RNA methyltransferase NW313_RS06195 PF04204 Homoserine O-succinyltransferase NW313_RS06215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW313_RS06230 PF17203 Single cache domain 3 NW313_RS06230 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain NW313_RS06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS06230 PF00989 PAS fold NW313_RS06235 PF12431 Transcriptional regulator NW313_RS06235 PF00072 Response regulator receiver domain NW313_RS06245 PF01584 CheW-like domain NW313_RS06245 PF00072 Response regulator receiver domain NW313_RS06265 PF00072 Response regulator receiver domain NW313_RS06265 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS06285 PF07690 Major Facilitator Superfamily NW313_RS06290 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain NW313_RS06290 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain NW313_RS06295 PF08544 GHMP kinases C terminal NW313_RS06295 PF00288 GHMP kinases N terminal domain NW313_RS06295 PF10509 Galactokinase galactose-binding signature NW313_RS06300 PF01263 Aldose 1-epimerase NW313_RS06305 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS06310 PF00672 HAMP domain NW313_RS06310 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS06310 PF17154 Gammaproteobacterial periplasmic sensor domain NW313_RS06310 PF00563 EAL domain NW313_RS06320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW313_RS06320 PF00205 Thiamine pyrophosphate enzyme, central domain NW313_RS06320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW313_RS06330 PF03466 LysR substrate binding domain NW313_RS06330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS06340 PF06628 Catalase-related immune-responsive NW313_RS06340 PF00199 Catalase NW313_RS06350 PF00080 Copper/zinc superoxide dismutase (SODC) NW313_RS06355 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NW313_RS06360 PF00361 Proton-conducting membrane transporter NW313_RS06360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NW313_RS06365 PF03466 LysR substrate binding domain NW313_RS06365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS06370 PF13193 AMP-binding enzyme C-terminal domain NW313_RS06370 PF00501 AMP-binding enzyme NW313_RS06385 PF04266 ASCH domain NW313_RS06400 PF00206 Lyase NW313_RS06400 PF10415 Fumarase C C-terminus NW313_RS06410 PF01654 Cytochrome bd terminal oxidase subunit I NW313_RS06415 PF02322 Cytochrome bd terminal oxidase subunit II NW313_RS06420 PF12704 MacB-like periplasmic core domain NW313_RS06420 PF02687 FtsX-like permease family NW313_RS06420 PF00005 ABC transporter NW313_RS06425 PF12704 MacB-like periplasmic core domain NW313_RS06425 PF02687 FtsX-like permease family NW313_RS06425 PF00005 ABC transporter NW313_RS06430 PF00005 ABC transporter NW313_RS06430 PF02687 FtsX-like permease family NW313_RS06430 PF12704 MacB-like periplasmic core domain NW313_RS06440 PF00529 HlyD membrane-fusion protein of T1SS NW313_RS06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS06450 PF03466 LysR substrate binding domain NW313_RS06455 PF00141 Peroxidase NW313_RS06460 PF00232 Glycosyl hydrolase family 1 NW313_RS06465 PF00356 Bacterial regulatory proteins, lacI family NW313_RS06470 PF01042 Endoribonuclease L-PSP NW313_RS06475 PF04074 YhcH/YjgK/YiaL NW313_RS06480 PF03009 Glycerophosphoryl diester phosphodiesterase family NW313_RS06485 PF00455 DeoR C terminal sensor domain NW313_RS06485 PF08220 DeoR-like helix-turn-helix domain NW313_RS06490 PF00005 ABC transporter NW313_RS06490 PF17912 MalK OB fold domain NW313_RS06495 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS06500 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS06505 PF13416 Bacterial extracellular solute-binding protein NW313_RS06515 PF01618 MotA/TolQ/ExbB proton channel family NW313_RS06520 PF01618 MotA/TolQ/ExbB proton channel family NW313_RS06525 PF02472 Biopolymer transport protein ExbD/TolR NW313_RS06530 PF03544 Gram-negative bacterial TonB protein C-terminal NW313_RS06540 PF01068 ATP dependent DNA ligase domain NW313_RS06540 PF14743 DNA ligase OB-like domain NW313_RS06550 PF01554 MatE NW313_RS06560 PF03881 Fructosamine kinase NW313_RS06570 PF00877 NlpC/P60 family NW313_RS06575 PF02743 Cache domain NW313_RS06575 PF00672 HAMP domain NW313_RS06575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS06585 PF03942 DTW domain NW313_RS06590 PF00480 ROK family NW313_RS06610 PF03454 MoeA C-terminal region (domain IV) NW313_RS06610 PF00994 Probable molybdopterin binding domain NW313_RS06610 PF03453 MoeA N-terminal region (domain I and II) NW313_RS06615 PF12804 MobA-like NTP transferase domain NW313_RS06620 PF00005 ABC transporter NW313_RS06620 PF08402 TOBE domain NW313_RS06625 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS06630 PF12849 PBP superfamily domain NW313_RS06635 PF02954 Bacterial regulatory protein, Fis family NW313_RS06635 PF00158 Sigma-54 interaction domain NW313_RS06635 PF00072 Response regulator receiver domain NW313_RS06640 PF00989 PAS fold NW313_RS06640 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS06645 PF12848 ABC transporter NW313_RS06645 PF00005 ABC transporter NW313_RS06650 PF02634 FdhD/NarQ family NW313_RS06670 PF02613 Nitrate reductase delta subunit NW313_RS06680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NW313_RS06680 PF00384 Molybdopterin oxidoreductase NW313_RS06680 PF01568 Molydopterin dinucleotide binding domain NW313_RS06685 PF13247 4Fe-4S dicluster domain NW313_RS06700 PF02146 Sir2 family NW313_RS06705 PF04461 Protein of unknown function (DUF520) NW313_RS06710 PF00793 DAHP synthetase I family NW313_RS06725 PF17783 CvfB-like winged helix domain NW313_RS06725 PF13509 S1 domain NW313_RS06730 PF01189 16S rRNA methyltransferase RsmB/F NW313_RS06730 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF NW313_RS06730 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF NW313_RS06735 PF02470 MlaD protein NW313_RS06740 PF04403 Paraquat-inducible protein A NW313_RS06745 PF00005 ABC transporter NW313_RS06745 PF00664 ABC transporter transmembrane region NW313_RS06750 PF13185 GAF domain NW313_RS06755 PF04352 ProQ/FINO family NW313_RS06755 PF17516 ProQ C-terminal domain NW313_RS06760 PF11818 C-terminal domain of tail specific protease (DUF3340) NW313_RS06760 PF00595 PDZ domain NW313_RS06760 PF03572 Peptidase family S41 NW313_RS06760 PF17804 Tail specific protease N-terminal domain NW313_RS06770 PF11940 Domain of unknown function (DUF3458) Ig-like fold NW313_RS06770 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NW313_RS06770 PF01433 Peptidase family M1 domain NW313_RS06780 PF05088 Bacterial NAD-glutamate dehydrogenase NW313_RS06785 PF01180 Dihydroorotate dehydrogenase NW313_RS06790 PF07126 Cell-division protein ZapC NW313_RS06795 PF10672 S-adenosylmethionine-dependent methyltransferase NW313_RS06795 PF02926 THUMP domain NW313_RS06795 PF01170 Putative RNA methylase family UPF0020 NW313_RS06805 PF00005 ABC transporter NW313_RS06805 PF16326 ABC transporter C-terminal domain NW313_RS06805 PF12848 ABC transporter NW313_RS06815 PF04957 Ribosome modulation factor NW313_RS06820 PF07977 FabA-like domain NW313_RS06825 PF13654 AAA domain NW313_RS06825 PF05362 Lon protease (S16) C-terminal proteolytic domain NW313_RS06830 PF17414 MatP C-terminal ribbon-helix-helix domain NW313_RS06830 PF06303 MatP N-terminal domain NW313_RS06845 PF00872 Transposase, Mutator family NW313_RS06910 PF01381 Helix-turn-helix NW313_RS06930 PF01381 Helix-turn-helix NW313_RS06950 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII NW313_RS06955 PF10734 Protein of unknown function (DUF2523) NW313_RS06960 PF05707 Zonular occludens toxin (Zot) NW313_RS06965 PF01375 Heat-labile enterotoxin alpha chain NW313_RS06970 PF01376 Heat-labile enterotoxin beta chain NW313_RS06975 PF07634 RtxA repeat NW313_RS06975 PF11713 Peptidase C80 family NW313_RS06975 PF11647 Membrane Localization Domain NW313_RS06975 PF12146 Serine aminopeptidase, S33 NW313_RS06975 PF16671 Actin cross-linking domain NW313_RS06980 PF02794 RTX toxin acyltransferase family NW313_RS06990 PF03412 Peptidase C39 family NW313_RS06990 PF00005 ABC transporter NW313_RS06990 PF00664 ABC transporter transmembrane region NW313_RS07000 PF03412 Peptidase C39 family NW313_RS07000 PF00005 ABC transporter NW313_RS07000 PF00664 ABC transporter transmembrane region NW313_RS07005 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS07005 PF09308 LuxQ, periplasmic NW313_RS07005 PF00072 Response regulator receiver domain NW313_RS07020 PF00115 Cytochrome C and Quinol oxidase polypeptide I NW313_RS07035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NW313_RS07035 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP NW313_RS07045 PF00403 Heavy-metal-associated domain NW313_RS07060 PF13545 Crp-like helix-turn-helix domain NW313_RS07060 PF00027 Cyclic nucleotide-binding domain NW313_RS07065 PF00582 Universal stress protein family NW313_RS07070 PF01171 PP-loop family NW313_RS07090 PF00005 ABC transporter NW313_RS07090 PF08402 TOBE domain NW313_RS07095 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS07100 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS07105 PF13416 Bacterial extracellular solute-binding protein NW313_RS07110 PF13416 Bacterial extracellular solute-binding protein NW313_RS07125 PF01235 Sodium:alanine symporter family NW313_RS07130 PF01810 LysE type translocator NW313_RS07145 PF01764 Lipase (class 3) NW313_RS07155 PF04717 Type VI secretion system, phage-baseplate injector NW313_RS07155 PF16671 Actin cross-linking domain NW313_RS07160 PF05638 Type VI secretion system effector, Hcp NW313_RS07165 PF02074 Carboxypeptidase Taq (M32) metallopeptidase NW313_RS07170 PF00672 HAMP domain NW313_RS07170 PF02743 Cache domain NW313_RS07170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS07175 PF07690 Major Facilitator Superfamily NW313_RS07180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW313_RS07180 PF00529 HlyD membrane-fusion protein of T1SS NW313_RS07185 PF02321 Outer membrane efflux protein NW313_RS07195 PF00270 DEAD/DEAH box helicase NW313_RS07195 PF00271 Helicase conserved C-terminal domain NW313_RS07200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS07200 PF00672 HAMP domain NW313_RS07200 PF02743 Cache domain NW313_RS07210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS07210 PF00672 HAMP domain NW313_RS07210 PF12729 Four helix bundle sensory module for signal transduction NW313_RS07215 PF00672 HAMP domain NW313_RS07215 PF17202 Single cache domain 3 NW313_RS07215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS07220 PF01584 CheW-like domain NW313_RS07225 PF01339 CheB methylesterase NW313_RS07225 PF00072 Response regulator receiver domain NW313_RS07235 PF03705 CheR methyltransferase, all-alpha domain NW313_RS07235 PF01739 CheR methyltransferase, SAM binding domain NW313_RS07240 PF01584 CheW-like domain NW313_RS07240 PF02895 Signal transducing histidine kinase, homodimeric domain NW313_RS07240 PF00072 Response regulator receiver domain NW313_RS07240 PF01627 Hpt domain NW313_RS07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS07245 PF07194 P2 response regulator binding domain NW313_RS07245 PF01627 Hpt domain NW313_RS07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS07245 PF02895 Signal transducing histidine kinase, homodimeric domain NW313_RS07245 PF01584 CheW-like domain NW313_RS07255 PF00072 Response regulator receiver domain NW313_RS07260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS07260 PF00672 HAMP domain NW313_RS07265 PF00893 Small Multidrug Resistance protein NW313_RS07270 PF03441 FAD binding domain of DNA photolyase NW313_RS07270 PF00875 DNA photolyase NW313_RS07275 PF07690 Major Facilitator Superfamily NW313_RS07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS07280 PF03466 LysR substrate binding domain NW313_RS07290 PF03099 Biotin/lipoate A/B protein ligase family NW313_RS07290 PF10437 Bacterial lipoate protein ligase C-terminus NW313_RS07295 PF00012 Hsp70 protein NW313_RS07305 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NW313_RS07305 PF00270 DEAD/DEAH box helicase NW313_RS07305 PF11898 Domain of unknown function (DUF3418) NW313_RS07305 PF04408 Helicase associated domain (HA2) NW313_RS07305 PF00271 Helicase conserved C-terminal domain NW313_RS07330 PF03707 Bacterial signalling protein N terminal repeat NW313_RS07330 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS07330 PF00563 EAL domain NW313_RS07340 PF00012 Hsp70 protein NW313_RS07345 PF00012 Hsp70 protein NW313_RS07350 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS07350 PF17158 Membrane-associated sensor, integral membrane domain NW313_RS07360 PF03707 Bacterial signalling protein N terminal repeat NW313_RS07360 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS07360 PF00563 EAL domain NW313_RS07380 PF06508 Queuosine biosynthesis protein QueC NW313_RS07385 PF04055 Radical SAM superfamily NW313_RS07395 PF10414 Sirohaem synthase dimerisation region NW313_RS07395 PF14824 Sirohaem biosynthesis protein central NW313_RS07395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW313_RS07400 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW313_RS07405 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS07410 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS07415 PF00005 ABC transporter NW313_RS07420 PF01027 Inhibitor of apoptosis-promoting Bax1 NW313_RS07425 PF04358 DsrC like protein NW313_RS07430 PF00708 Acylphosphatase NW313_RS07435 PF10672 S-adenosylmethionine-dependent methyltransferase NW313_RS07435 PF17785 PUA-like domain NW313_RS07440 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS07445 PF00462 Glutaredoxin NW313_RS07445 PF08534 Redoxin NW313_RS07450 PF00672 HAMP domain NW313_RS07450 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NW313_RS07450 PF00072 Response regulator receiver domain NW313_RS07450 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS07450 PF01627 Hpt domain NW313_RS07450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS07455 PF00072 Response regulator receiver domain NW313_RS07460 PF02798 Glutathione S-transferase, N-terminal domain NW313_RS07460 PF14497 Glutathione S-transferase, C-terminal domain NW313_RS07470 PF04209 homogentisate 1,2-dioxygenase NW313_RS07475 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW313_RS07480 PF07687 Peptidase dimerisation domain NW313_RS07480 PF01546 Peptidase family M20/M25/M40 NW313_RS07495 PF16177 Acetyl-coenzyme A synthetase N-terminus NW313_RS07495 PF00501 AMP-binding enzyme NW313_RS07495 PF13193 AMP-binding enzyme C-terminal domain NW313_RS07500 PF04303 PrpF protein NW313_RS07505 PF00330 Aconitase family (aconitate hydratase) NW313_RS07505 PF00694 Aconitase C-terminal domain NW313_RS07510 PF00285 Citrate synthase, C-terminal domain NW313_RS07520 PF07729 FCD domain NW313_RS07520 PF00392 Bacterial regulatory proteins, gntR family NW313_RS07535 PF01970 Tripartite tricarboxylate transporter TctA family NW313_RS07550 PF02653 Branched-chain amino acid transport system / permease component NW313_RS07555 PF00005 ABC transporter NW313_RS07560 PF13407 Periplasmic binding protein domain NW313_RS07580 PF00486 Transcriptional regulatory protein, C terminal NW313_RS07580 PF00072 Response regulator receiver domain NW313_RS07585 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS07585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS07585 PF00672 HAMP domain NW313_RS07590 PF06629 MltA-interacting protein MipA NW313_RS07595 PF04393 Protein of unknown function (DUF535) NW313_RS07600 PF00158 Sigma-54 interaction domain NW313_RS07600 PF00072 Response regulator receiver domain NW313_RS07600 PF02954 Bacterial regulatory protein, Fis family NW313_RS07605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS07605 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS07605 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW313_RS07610 PF00939 Sodium:sulfate symporter transmembrane region NW313_RS07615 PF00672 HAMP domain NW313_RS07615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS07620 PF00842 Alanine racemase, C-terminal domain NW313_RS07620 PF01168 Alanine racemase, N-terminal domain NW313_RS07625 PF00892 EamA-like transporter family NW313_RS07635 PF13302 Acetyltransferase (GNAT) domain NW313_RS07640 PF18024 Helix-turn-helix domain NW313_RS07640 PF00158 Sigma-54 interaction domain NW313_RS07645 PF05128 Domain of unknown function (DUF697) NW313_RS07650 PF04317 YcjX-like family, DUF463 NW313_RS07665 PF04715 Anthranilate synthase component I, N terminal region NW313_RS07665 PF00425 chorismate binding enzyme NW313_RS07670 PF00293 NUDIX domain NW313_RS07675 PF03222 Tryptophan/tyrosine permease family NW313_RS07680 PF03313 Serine dehydratase alpha chain NW313_RS07680 PF03315 Serine dehydratase beta chain NW313_RS07685 PF01242 6-pyruvoyl tetrahydropterin synthase NW313_RS07690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS07690 PF00672 HAMP domain NW313_RS07695 PF00152 tRNA synthetases class II (D, K and N) NW313_RS07695 PF01336 OB-fold nucleic acid binding domain NW313_RS07700 PF08543 Phosphomethylpyrimidine kinase NW313_RS07705 PF00672 HAMP domain NW313_RS07705 PF01966 HD domain NW313_RS07710 PF00155 Aminotransferase class I and II NW313_RS07725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS07725 PF17200 Single Cache domain 2 NW313_RS07725 PF00672 HAMP domain NW313_RS07730 PF04349 Periplasmic glucan biosynthesis protein, MdoG NW313_RS07735 PF13506 Glycosyl transferase family 21 NW313_RS07740 PF00356 Bacterial regulatory proteins, lacI family NW313_RS07745 PF04794 YdjC-like protein NW313_RS07750 PF11975 Family 4 glycosyl hydrolase C-terminal domain NW313_RS07750 PF02056 Family 4 glycosyl hydrolase NW313_RS07755 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit NW313_RS07760 PF02378 Phosphotransferase system, EIIC NW313_RS07765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NW313_RS07770 PF01522 Polysaccharide deacetylase NW313_RS07775 PF02028 BCCT, betaine/carnitine/choline family transporter NW313_RS07780 PF01047 MarR family NW313_RS07785 PF00196 Bacterial regulatory proteins, luxR family NW313_RS07785 PF00072 Response regulator receiver domain NW313_RS07790 PF07730 Histidine kinase NW313_RS07790 PF17200 Single Cache domain 2 NW313_RS07795 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NW313_RS07805 PF03480 Bacterial extracellular solute-binding protein, family 7 NW313_RS07820 PF00753 Metallo-beta-lactamase superfamily NW313_RS07825 PF05951 Bacterial protein of unknown function (DUF882) NW313_RS07830 PF03734 L,D-transpeptidase catalytic domain NW313_RS07830 PF01471 Putative peptidoglycan binding domain NW313_RS07855 PF00925 GTP cyclohydrolase II NW313_RS07865 PF07690 Major Facilitator Superfamily NW313_RS07875 PF17773 UPF0176 acylphosphatase like domain NW313_RS07875 PF00581 Rhodanese-like domain NW313_RS07880 PF00521 DNA gyrase/topoisomerase IV, subunit A NW313_RS07880 PF03989 DNA gyrase C-terminal domain, beta-propeller NW313_RS07890 PF02867 Ribonucleotide reductase, barrel domain NW313_RS07890 PF00317 Ribonucleotide reductase, all-alpha domain NW313_RS07890 PF03477 ATP cone domain NW313_RS07895 PF00268 Ribonucleotide reductase, small chain NW313_RS07900 PF00970 Oxidoreductase FAD-binding domain NW313_RS07900 PF00111 2Fe-2S iron-sulfur cluster binding domain NW313_RS07900 PF00175 Oxidoreductase NAD-binding domain NW313_RS07910 PF00994 Probable molybdopterin binding domain NW313_RS07925 PF17200 Single Cache domain 2 NW313_RS07925 PF00672 HAMP domain NW313_RS07925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS07940 PF00005 ABC transporter NW313_RS07945 PF01032 FecCD transport family NW313_RS07950 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NW313_RS07960 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NW313_RS07965 PF02654 Cobalamin-5-phosphate synthase NW313_RS07970 PF02277 Phosphoribosyltransferase NW313_RS07975 PF01641 SelR domain NW313_RS07980 PF00375 Sodium:dicarboxylate symporter family NW313_RS07985 PF08411 Exonuclease C-terminal NW313_RS07985 PF00929 Exonuclease NW313_RS07990 PF03788 LrgA family NW313_RS07995 PF04172 LrgB-like family NW313_RS08000 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region NW313_RS08000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NW313_RS08010 PF02222 ATP-grasp domain NW313_RS08015 PF05724 Thiopurine S-methyltransferase (TPMT) NW313_RS08025 PF00216 Bacterial DNA-binding protein NW313_RS08030 PF03147 Ferredoxin-fold anticodon binding domain NW313_RS08030 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NW313_RS08030 PF01588 Putative tRNA binding domain NW313_RS08030 PF03483 B3/4 domain NW313_RS08030 PF03484 tRNA synthetase B5 domain NW313_RS08035 PF01409 tRNA synthetases class II core domain (F) NW313_RS08035 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NW313_RS08045 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS08045 PF00072 Response regulator receiver domain NW313_RS08070 PF01066 CDP-alcohol phosphatidyltransferase NW313_RS08075 PF02151 UvrB/uvrC motif NW313_RS08075 PF08459 UvrC Helix-hairpin-helix N-terminal NW313_RS08075 PF01541 GIY-YIG catalytic domain NW313_RS08080 PF00196 Bacterial regulatory proteins, luxR family NW313_RS08080 PF00072 Response regulator receiver domain NW313_RS08085 PF00136 DNA polymerase family B NW313_RS08085 PF03104 DNA polymerase family B, exonuclease domain NW313_RS08090 PF00563 EAL domain NW313_RS08090 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS08090 PF13426 PAS domain NW313_RS08100 PF01132 Elongation factor P (EF-P) OB domain NW313_RS08100 PF09285 Elongation factor P, C-terminal NW313_RS08100 PF08207 Elongation factor P (EF-P) KOW-like domain NW313_RS08105 PF04269 Protein of unknown function, DUF440 NW313_RS08115 PF07702 UTRA domain NW313_RS08115 PF00392 Bacterial regulatory proteins, gntR family NW313_RS08120 PF01979 Amidohydrolase family NW313_RS08125 PF00491 Arginase family NW313_RS08130 PF01175 Urocanase Rossmann-like domain NW313_RS08130 PF17391 Urocanase N-terminal domain NW313_RS08130 PF17392 Urocanase C-terminal domain NW313_RS08135 PF00221 Aromatic amino acid lyase NW313_RS08145 PF00089 Trypsin NW313_RS08150 PF04191 Phospholipid methyltransferase NW313_RS08155 PF13183 4Fe-4S dicluster domain NW313_RS08155 PF02913 FAD linked oxidases, C-terminal domain NW313_RS08155 PF01565 FAD binding domain NW313_RS08170 PF13488 Glycine zipper NW313_RS08170 PF00691 OmpA family NW313_RS08190 PF01259 SAICAR synthetase NW313_RS08200 PF03949 Malic enzyme, NAD binding domain NW313_RS08200 PF00390 Malic enzyme, N-terminal domain NW313_RS08210 PF02698 DUF218 domain NW313_RS08215 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS08215 PF08448 PAS fold NW313_RS08220 PF00266 Aminotransferase class-V NW313_RS08230 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS08235 PF00664 ABC transporter transmembrane region NW313_RS08235 PF00005 ABC transporter NW313_RS08240 PF00664 ABC transporter transmembrane region NW313_RS08240 PF00005 ABC transporter NW313_RS08245 PF00849 RNA pseudouridylate synthase NW313_RS08245 PF01479 S4 domain NW313_RS08250 PF01300 Telomere recombination NW313_RS08255 PF02811 PHP domain NW313_RS08260 PF08056 Tryptophan operon leader peptide NW313_RS08265 PF04715 Anthranilate synthase component I, N terminal region NW313_RS08265 PF00425 chorismate binding enzyme NW313_RS08270 PF00117 Glutamine amidotransferase class-I NW313_RS08275 PF00591 Glycosyl transferase family, a/b domain NW313_RS08275 PF02885 Glycosyl transferase family, helical bundle domain NW313_RS08280 PF00218 Indole-3-glycerol phosphate synthase NW313_RS08280 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NW313_RS08285 PF00291 Pyridoxal-phosphate dependent enzyme NW313_RS08290 PF00290 Tryptophan synthase alpha chain NW313_RS08295 PF00375 Sodium:dicarboxylate symporter family NW313_RS08300 PF00265 Thymidine kinase NW313_RS08305 PF00152 tRNA synthetases class II (D, K and N) NW313_RS08305 PF01336 OB-fold nucleic acid binding domain NW313_RS08305 PF02938 GAD domain NW313_RS08310 PF01904 Protein of unknown function DUF72 NW313_RS08315 PF13649 Methyltransferase domain NW313_RS08320 PF08003 Protein of unknown function (DUF1698) NW313_RS08340 PF00266 Aminotransferase class-V NW313_RS08350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS08350 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS08350 PF00989 PAS fold NW313_RS08365 PF04994 TfoX C-terminal domain NW313_RS08365 PF04993 TfoX N-terminal domain NW313_RS08375 PF03956 Lysine exporter LysO NW313_RS08385 PF00282 Pyridoxal-dependent decarboxylase conserved domain NW313_RS08390 PF01380 SIS domain NW313_RS08390 PF01418 Helix-turn-helix domain, rpiR family NW313_RS08395 PF00465 Iron-containing alcohol dehydrogenase NW313_RS08395 PF00171 Aldehyde dehydrogenase family NW313_RS08400 PF00462 Glutaredoxin NW313_RS08405 PF06826 Predicted Permease Membrane Region NW313_RS08405 PF02080 TrkA-C domain NW313_RS08410 PF10431 C-terminal, D2-small domain, of ClpB protein NW313_RS08410 PF00004 ATPase family associated with various cellular activities (AAA) NW313_RS08410 PF07724 AAA domain (Cdc48 subfamily) NW313_RS08410 PF17871 AAA lid domain NW313_RS08410 PF02861 Clp amino terminal domain, pathogenicity island component NW313_RS08415 PF02617 ATP-dependent Clp protease adaptor protein ClpS NW313_RS08420 PF00313 'Cold-shock' DNA-binding domain NW313_RS08425 PF03971 Monomeric isocitrate dehydrogenase NW313_RS08430 PF00849 RNA pseudouridylate synthase NW313_RS08435 PF01502 Phosphoribosyl-AMP cyclohydrolase NW313_RS08435 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NW313_RS08440 PF00977 Histidine biosynthesis protein NW313_RS08445 PF00977 Histidine biosynthesis protein NW313_RS08450 PF00117 Glutamine amidotransferase class-I NW313_RS08455 PF00475 Imidazoleglycerol-phosphate dehydratase NW313_RS08455 PF08645 Polynucleotide kinase 3 phosphatase NW313_RS08460 PF00155 Aminotransferase class I and II NW313_RS08465 PF00815 Histidinol dehydrogenase NW313_RS08470 PF01634 ATP phosphoribosyltransferase NW313_RS08470 PF08029 HisG, C-terminal domain NW313_RS08475 PF03553 Na+/H+ antiporter family NW313_RS08480 PF00816 H-NS histone family NW313_RS08485 PF00294 pfkB family carbohydrate kinase NW313_RS08495 PF04356 Protein of unknown function (DUF489) NW313_RS08500 PF08328 Adenylosuccinate lyase C-terminal NW313_RS08500 PF00206 Lyase NW313_RS08510 PF16036 Chalcone isomerase-like NW313_RS08535 PF00106 short chain dehydrogenase NW313_RS08545 PF01435 Peptidase family M48 NW313_RS08560 PF08241 Methyltransferase domain NW313_RS08565 PF00155 Aminotransferase class I and II NW313_RS08570 PF06968 Biotin and Thiamin Synthesis associated domain NW313_RS08570 PF04055 Radical SAM superfamily NW313_RS08575 PF00202 Aminotransferase class-III NW313_RS08580 PF02403 Seryl-tRNA synthetase N-terminal domain NW313_RS08580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NW313_RS08585 PF00004 ATPase family associated with various cellular activities (AAA) NW313_RS08585 PF16193 AAA C-terminal domain NW313_RS08585 PF12002 MgsA AAA+ ATPase C terminal NW313_RS08590 PF03548 Outer membrane lipoprotein carrier protein LolA NW313_RS08595 PF07516 SecA Wing and Scaffold domain NW313_RS08595 PF01043 SecA preprotein cross-linking domain NW313_RS08595 PF02810 SEC-C motif NW313_RS08595 PF07517 SecA DEAD-like domain NW313_RS08600 PF01207 Dihydrouridine synthase (Dus) NW313_RS08605 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS08610 PF00005 ABC transporter NW313_RS08615 PF02653 Branched-chain amino acid transport system / permease component NW313_RS08625 PF09905 DNA-binding protein VF530 NW313_RS08630 PF04217 Protein of unknown function, DUF412 NW313_RS08635 PF00871 Acetokinase family NW313_RS08640 PF07085 DRTGG domain NW313_RS08640 PF01515 Phosphate acetyl/butaryl transferase NW313_RS08645 PF13409 Glutathione S-transferase, N-terminal domain NW313_RS08650 PF00005 ABC transporter NW313_RS08650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW313_RS08655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW313_RS08655 PF00005 ABC transporter NW313_RS08660 PF12911 N-terminal TM domain of oligopeptide transport permease C NW313_RS08660 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS08665 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS08670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW313_RS08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS08680 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS08680 PF08448 PAS fold NW313_RS08680 PF13188 PAS domain NW313_RS08680 PF00072 Response regulator receiver domain NW313_RS08685 PF02954 Bacterial regulatory protein, Fis family NW313_RS08685 PF00072 Response regulator receiver domain NW313_RS08685 PF00158 Sigma-54 interaction domain NW313_RS08690 PF00563 EAL domain NW313_RS08690 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS08690 PF13188 PAS domain NW313_RS08690 PF03707 Bacterial signalling protein N terminal repeat NW313_RS08695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS08695 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS08700 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS08700 PF00989 PAS fold NW313_RS08700 PF13188 PAS domain NW313_RS08700 PF13426 PAS domain NW313_RS08710 PF00072 Response regulator receiver domain NW313_RS08725 PF03481 Putative GTP-binding controlling metal-binding NW313_RS08725 PF01300 Telomere recombination NW313_RS08740 PF01161 Phosphatidylethanolamine-binding protein NW313_RS08750 PF06483 Chitinase C NW313_RS08750 PF00704 Glycosyl hydrolases family 18 NW313_RS08765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NW313_RS08765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NW313_RS08770 PF01022 Bacterial regulatory protein, arsR family NW313_RS08780 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS08780 PF08448 PAS fold NW313_RS08790 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NW313_RS08805 PF01037 Lrp/AsnC ligand binding domain NW313_RS08805 PF13404 AsnC-type helix-turn-helix domain NW313_RS08810 PF00291 Pyridoxal-phosphate dependent enzyme NW313_RS08815 PF08496 Peptidase family S49 N-terminal NW313_RS08815 PF01343 Peptidase family S49 NW313_RS08820 PF00106 short chain dehydrogenase NW313_RS08825 PF03692 Putative zinc- or iron-chelating domain NW313_RS08830 PF03692 Putative zinc- or iron-chelating domain NW313_RS08835 PF02132 RecR protein NW313_RS08835 PF13662 Toprim domain NW313_RS08840 PF02575 YbaB/EbfC DNA-binding family NW313_RS08845 PF12169 DNA polymerase III subunits gamma and tau domain III NW313_RS08845 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NW313_RS08845 PF12170 DNA polymerase III tau subunit V interacting with alpha NW313_RS08850 PF00156 Phosphoribosyl transferase domain NW313_RS08855 PF04304 Protein of unknown function (DUF454) NW313_RS08860 PF00072 Response regulator receiver domain NW313_RS08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS08865 PF03466 LysR substrate binding domain NW313_RS08870 PF00881 Nitroreductase family NW313_RS08875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NW313_RS08875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NW313_RS08875 PF00378 Enoyl-CoA hydratase/isomerase NW313_RS08880 PF02803 Thiolase, C-terminal domain NW313_RS08880 PF00108 Thiolase, N-terminal domain NW313_RS08885 PF04542 Sigma-70 region 2 NW313_RS08885 PF08281 Sigma-70, region 4 NW313_RS08895 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NW313_RS08900 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NW313_RS08905 PF01451 Low molecular weight phosphotyrosine protein phosphatase NW313_RS08910 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NW313_RS08910 PF12557 Cob(I)alamin adenosyltransferase N terminal NW313_RS08915 PF05170 AsmA family NW313_RS08920 PF00485 Phosphoribulokinase / Uridine kinase family NW313_RS08925 PF10609 NUBPL iron-transfer P-loop NTPase NW313_RS08930 PF09334 tRNA synthetases class I (M) NW313_RS08930 PF01588 Putative tRNA binding domain NW313_RS08940 PF01048 Phosphorylase superfamily NW313_RS08945 PF00403 Heavy-metal-associated domain NW313_RS08950 PF00571 CBS domain NW313_RS08950 PF01743 Poly A polymerase head domain NW313_RS08955 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS08955 PF07694 5TMR of 5TMR-LYT NW313_RS08960 PF02391 MoaE protein NW313_RS08965 PF02597 ThiS family NW313_RS08970 PF01967 MoaC family NW313_RS08975 PF00994 Probable molybdopterin binding domain NW313_RS08980 PF06463 Molybdenum Cofactor Synthesis C NW313_RS08980 PF04055 Radical SAM superfamily NW313_RS08985 PF01933 Uncharacterised protein family UPF0052 NW313_RS08990 PF01627 Hpt domain NW313_RS08995 PF02954 Bacterial regulatory protein, Fis family NW313_RS08995 PF00072 Response regulator receiver domain NW313_RS08995 PF00158 Sigma-54 interaction domain NW313_RS09000 PF17757 UvrB interaction domain NW313_RS09000 PF00271 Helicase conserved C-terminal domain NW313_RS09000 PF02151 UvrB/uvrC motif NW313_RS09000 PF04851 Type III restriction enzyme, res subunit NW313_RS09000 PF12344 Ultra-violet resistance protein B NW313_RS09010 PF02508 Rnf-Nqr subunit, membrane protein NW313_RS09015 PF04060 Putative Fe-S cluster NW313_RS09020 PF13375 RnfC Barrel sandwich hybrid domain NW313_RS09020 PF10531 SLBB domain NW313_RS09020 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NW313_RS09020 PF12838 4Fe-4S dicluster domain NW313_RS09025 PF03116 NQR2, RnfD, RnfE family NW313_RS09030 PF04205 FMN-binding domain NW313_RS09035 PF02508 Rnf-Nqr subunit, membrane protein NW313_RS09040 PF00633 Helix-hairpin-helix motif NW313_RS09040 PF00730 HhH-GPD superfamily base excision DNA repair protein NW313_RS09040 PF10576 Iron-sulfur binding domain of endonuclease III NW313_RS09045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW313_RS09050 PF10952 Protein of unknown function (DUF2753) NW313_RS09055 PF18393 MotY N-terminal domain NW313_RS09055 PF00691 OmpA family NW313_RS09065 PF00929 Exonuclease NW313_RS09070 PF13726 Na+-H+ antiporter family NW313_RS09070 PF03553 Na+/H+ antiporter family NW313_RS09075 PF00156 Phosphoribosyl transferase domain NW313_RS09080 PF02674 Colicin V production protein NW313_RS09085 PF05036 Sporulation related domain NW313_RS09090 PF08245 Mur ligase middle domain NW313_RS09090 PF02875 Mur ligase family, glutamate ligase domain NW313_RS09095 PF01039 Carboxyl transferase domain NW313_RS09095 PF17848 Acetyl-coA carboxylase zinc finger domain NW313_RS09100 PF01416 tRNA pseudouridine synthase NW313_RS09115 PF00749 tRNA synthetases class I (E and Q), catalytic domain NW313_RS09115 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NW313_RS09120 PF02378 Phosphotransferase system, EIIC NW313_RS09120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NW313_RS09120 PF00367 phosphotransferase system, EIIB NW313_RS09125 PF01979 Amidohydrolase family NW313_RS09130 PF01047 MarR family NW313_RS09130 PF00480 ROK family NW313_RS09135 PF02254 TrkA-N domain NW313_RS09135 PF00999 Sodium/hydrogen exchanger family NW313_RS09140 PF13537 Glutamine amidotransferase domain NW313_RS09140 PF00733 Asparagine synthase NW313_RS09145 PF02357 Transcription termination factor nusG NW313_RS09150 PF00854 POT family NW313_RS09155 PF00762 Ferrochelatase NW313_RS09160 PF05191 Adenylate kinase, active site lid NW313_RS09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS09165 PF00183 Hsp90 protein NW313_RS09170 PF00486 Transcriptional regulatory protein, C terminal NW313_RS09175 PF17323 Trans-membrane regulatory protein ToxS NW313_RS09185 PF12850 Calcineurin-like phosphoesterase superfamily domain NW313_RS09190 PF01370 NAD dependent epimerase/dehydratase family NW313_RS09190 PF08338 Domain of unknown function (DUF1731) NW313_RS09195 PF00106 short chain dehydrogenase NW313_RS09200 PF00085 Thioredoxin NW313_RS09205 PF16200 C-terminal region of band_7 NW313_RS09205 PF01145 SPFH domain / Band 7 family NW313_RS09210 PF01957 NfeD-like C-terminal, partner-binding NW313_RS09215 PF13411 MerR HTH family regulatory protein NW313_RS09225 PF13609 Gram-negative porin NW313_RS09230 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NW313_RS09230 PF03120 NAD-dependent DNA ligase OB-fold domain NW313_RS09230 PF01653 NAD-dependent DNA ligase adenylation domain NW313_RS09230 PF00533 BRCA1 C Terminus (BRCT) domain NW313_RS09230 PF12826 Helix-hairpin-helix motif NW313_RS09235 PF04354 ZipA, C-terminal FtsZ-binding domain NW313_RS09245 PF00291 Pyridoxal-phosphate dependent enzyme NW313_RS09250 PF00381 PTS HPr component phosphorylation site NW313_RS09255 PF05524 PEP-utilising enzyme, N-terminal NW313_RS09255 PF02896 PEP-utilising enzyme, TIM barrel domain NW313_RS09255 PF00391 PEP-utilising enzyme, mobile domain NW313_RS09260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NW313_RS09265 PF01494 FAD binding domain NW313_RS09270 PF04055 Radical SAM superfamily NW313_RS09270 PF01938 TRAM domain NW313_RS09270 PF00919 Uncharacterized protein family UPF0004 NW313_RS09275 PF02562 PhoH-like protein NW313_RS09280 PF02130 Uncharacterized protein family UPF0054 NW313_RS09285 PF03471 Transporter associated domain NW313_RS09285 PF00571 CBS domain NW313_RS09290 PF00795 Carbon-nitrogen hydrolase NW313_RS09295 PF07295 Zinc-ribbon containing domain NW313_RS09300 PF13603 Leucyl-tRNA synthetase, Domain 2 NW313_RS09300 PF00133 tRNA synthetases class I (I, L, M and V) NW313_RS09300 PF08264 Anticodon-binding domain of tRNA NW313_RS09305 PF04390 Lipopolysaccharide-assembly NW313_RS09310 PF06144 DNA polymerase III, delta subunit NW313_RS09310 PF14840 Processivity clamp loader gamma complex DNA pol III C-term NW313_RS09320 PF02590 Predicted SPOUT methyltransferase NW313_RS09325 PF03717 Penicillin-binding Protein dimerisation domain NW313_RS09325 PF00905 Penicillin binding protein transpeptidase domain NW313_RS09330 PF01098 Cell cycle protein NW313_RS09335 PF05036 Sporulation related domain NW313_RS09335 PF03330 Lytic transglycolase NW313_RS09340 PF07943 Penicillin-binding protein 5, C-terminal domain NW313_RS09340 PF00768 D-alanyl-D-alanine carboxypeptidase NW313_RS09345 PF04359 Protein of unknown function (DUF493) NW313_RS09350 PF03099 Biotin/lipoate A/B protein ligase family NW313_RS09355 PF04055 Radical SAM superfamily NW313_RS09355 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NW313_RS09365 PF00464 Serine hydroxymethyltransferase NW313_RS09385 PF13807 G-rich domain on putative tyrosine kinase NW313_RS09385 PF02706 Chain length determinant protein NW313_RS09385 PF13614 AAA domain NW313_RS09390 PF02563 Polysaccharide biosynthesis/export protein NW313_RS09390 PF10531 SLBB domain NW313_RS09390 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NW313_RS09400 PF02397 Bacterial sugar transferase NW313_RS09415 PF12561 ToxR activated gene A lipoprotein domain NW313_RS09415 PF17945 Beta/Gamma crystallin NW313_RS09430 PF03808 Glycosyl transferase WecB/TagA/CpsF family NW313_RS09440 PF00534 Glycosyl transferases group 1 NW313_RS09440 PF00862 Sucrose synthase NW313_RS09450 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS09470 PF14602 Hexapeptide repeat of succinyl-transferase NW313_RS09470 PF12464 Maltose acetyltransferase NW313_RS09475 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NW313_RS09475 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NW313_RS09475 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NW313_RS09480 PF02350 UDP-N-acetylglucosamine 2-epimerase NW313_RS09485 PF01451 Low molecular weight phosphotyrosine protein phosphatase NW313_RS09490 PF00873 AcrB/AcrD/AcrF family NW313_RS09495 PF13533 Biotin-lipoyl like NW313_RS09515 PF16657 Maltogenic Amylase, C-terminal domain NW313_RS09515 PF00128 Alpha amylase, catalytic domain NW313_RS09520 PF02378 Phosphotransferase system, EIIC NW313_RS09520 PF00367 phosphotransferase system, EIIB NW313_RS09525 PF00356 Bacterial regulatory proteins, lacI family NW313_RS09535 PF00005 ABC transporter NW313_RS09535 PF09383 NIL domain NW313_RS09540 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS09545 PF03180 NLPA lipoprotein NW313_RS09550 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) NW313_RS09555 PF07348 Syd protein (SUKH-2) NW313_RS09560 PF14489 QueF-like protein NW313_RS09560 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NW313_RS09570 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS09575 PF03641 Possible lysine decarboxylase NW313_RS09575 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NW313_RS09575 PF11892 Domain of unknown function (DUF3412) NW313_RS09580 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NW313_RS09580 PF01367 5'-3' exonuclease, C-terminal SAM fold NW313_RS09585 PF04241 Protein of unknown function (DUF423) NW313_RS09590 PF03466 LysR substrate binding domain NW313_RS09590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS09595 PF02568 Thiamine biosynthesis protein (ThiI) NW313_RS09595 PF02926 THUMP domain NW313_RS09600 PF13677 Membrane MotB of proton-channel complex MotA/MotB NW313_RS09600 PF00691 OmpA family NW313_RS09605 PF01618 MotA/TolQ/ExbB proton channel family NW313_RS09615 PF02609 Exonuclease VII small subunit NW313_RS09620 PF00348 Polyprenyl synthetase NW313_RS09625 PF02779 Transketolase, pyrimidine binding domain NW313_RS09625 PF02780 Transketolase, C-terminal domain NW313_RS09625 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NW313_RS09630 PF00849 RNA pseudouridylate synthase NW313_RS09635 PF04287 tRNA pseudouridine synthase C NW313_RS09650 PF13302 Acetyltransferase (GNAT) domain NW313_RS09660 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NW313_RS09665 PF03806 AbgT putative transporter family NW313_RS09670 PF00444 Ribosomal protein L36 NW313_RS09675 PF01197 Ribosomal protein L31 NW313_RS09680 PF18389 TrmO C-terminal domain NW313_RS09680 PF01980 tRNA-methyltransferase O NW313_RS09685 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NW313_RS09685 PF03129 Anticodon binding domain NW313_RS09685 PF04073 Aminoacyl-tRNA editing domain NW313_RS09695 PF06786 Uncharacterised protein family (UPF0253) NW313_RS09705 PF01797 Transposase IS200 like NW313_RS09710 PF02769 AIR synthase related protein, C-terminal domain NW313_RS09710 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NW313_RS09710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NW313_RS09720 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW313_RS09720 PF01464 Transglycosylase SLT domain NW313_RS09730 PF14437 MafB19-like deaminase NW313_RS09735 PF03806 AbgT putative transporter family NW313_RS09760 PF00114 Pilin (bacterial filament) NW313_RS09760 PF07963 Prokaryotic N-terminal methylation motif NW313_RS09765 PF00684 DnaJ central domain NW313_RS09765 PF01556 DnaJ C terminal domain NW313_RS09765 PF00226 DnaJ domain NW313_RS09770 PF00012 Hsp70 protein NW313_RS09780 PF01025 GrpE NW313_RS09785 PF01513 ATP-NAD kinase NW313_RS09790 PF02463 RecF/RecN/SMC N terminal domain NW313_RS09795 PF04355 SmpA / OmlA family NW313_RS09800 PF03658 RnfH family Ubiquitin NW313_RS09805 PF03364 Polyketide cyclase / dehydrase and lipid transport NW313_RS09810 PF01668 SmpB protein NW313_RS09820 PF13356 Arm DNA-binding domain NW313_RS09820 PF00589 Phage integrase family NW313_RS09830 PF17291 N-terminal domain of M60-like peptidases NW313_RS09830 PF13402 Peptidase M60, enhancin and enhancin-like NW313_RS09830 PF13322 Domain of unknown function (DUF4092) NW313_RS09840 PF01551 Peptidase family M23 NW313_RS09840 PF04225 Opacity-associated protein A LysM-like domain NW313_RS09855 PF02743 Cache domain NW313_RS09855 PF00672 HAMP domain NW313_RS09855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS09860 PF01478 Type IV leader peptidase family NW313_RS09860 PF06750 Bacterial Peptidase A24 N-terminal domain NW313_RS09865 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family NW313_RS09870 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F NW313_RS09875 PF00482 Type II secretion system (T2SS), protein F NW313_RS09880 PF00437 Type II/IV secretion system protein NW313_RS09885 PF17456 Toxin-coregulated pilus protein S NW313_RS09905 PF10671 Toxin co-regulated pilus biosynthesis protein Q NW313_RS09915 PF07963 Prokaryotic N-terminal methylation motif NW313_RS09915 PF05946 Toxin-coregulated pilus subunit TcpA NW313_RS09925 PF00486 Transcriptional regulatory protein, C terminal NW313_RS09930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS09935 PF08534 Redoxin NW313_RS09950 PF12561 ToxR activated gene A lipoprotein domain NW313_RS09950 PF00041 Fibronectin type III domain NW313_RS09955 PF00171 Aldehyde dehydrogenase family NW313_RS10015 PF11953 Domain of unknown function (DUF3470) NW313_RS10015 PF00037 4Fe-4S binding domain NW313_RS10020 PF00588 SpoU rRNA Methylase family NW313_RS10020 PF08032 RNA 2'-O ribose methyltransferase substrate binding NW313_RS10030 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NW313_RS10035 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase NW313_RS10040 PF04223 Citrate lyase, alpha subunit (CitF) NW313_RS10045 PF03328 HpcH/HpaI aldolase/citrate lyase family NW313_RS10050 PF06857 Malonate decarboxylase delta subunit (MdcD) NW313_RS10055 PF08218 Citrate lyase ligase C-terminal domain NW313_RS10060 PF03390 2-hydroxycarboxylate transporter family NW313_RS10065 PF04277 Oxaloacetate decarboxylase, gamma chain NW313_RS10070 PF00364 Biotin-requiring enzyme NW313_RS10070 PF00682 HMGL-like NW313_RS10070 PF02436 Conserved carboxylase domain NW313_RS10075 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NW313_RS10080 PF17203 Single cache domain 3 NW313_RS10080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS10085 PF12431 Transcriptional regulator NW313_RS10085 PF00072 Response regulator receiver domain NW313_RS10100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS10100 PF03466 LysR substrate binding domain NW313_RS10105 PF01266 FAD dependent oxidoreductase NW313_RS10110 PF01235 Sodium:alanine symporter family NW313_RS10115 PF14863 Alkyl sulfatase dimerisation NW313_RS10115 PF00753 Metallo-beta-lactamase superfamily NW313_RS10115 PF14864 Alkyl sulfatase C-terminal NW313_RS10120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS10120 PF03466 LysR substrate binding domain NW313_RS10125 PF17837 4'-phosphopantetheinyl transferase N-terminal domain NW313_RS10125 PF01648 4'-phosphopantetheinyl transferase superfamily NW313_RS10130 PF00005 ABC transporter NW313_RS10135 PF01032 FecCD transport family NW313_RS10140 PF01032 FecCD transport family NW313_RS10145 PF01497 Periplasmic binding protein NW313_RS10160 PF00425 chorismate binding enzyme NW313_RS10165 PF00501 AMP-binding enzyme NW313_RS10165 PF13193 AMP-binding enzyme C-terminal domain NW313_RS10170 PF00550 Phosphopantetheine attachment site NW313_RS10170 PF00857 Isochorismatase family NW313_RS10175 PF01184 GPR1/FUN34/yaaH family NW313_RS10180 PF00704 Glycosyl hydrolases family 18 NW313_RS10180 PF06483 Chitinase C NW313_RS10185 PF00117 Glutamine amidotransferase class-I NW313_RS10185 PF00958 GMP synthase C terminal domain NW313_RS10185 PF02540 NAD synthase NW313_RS10190 PF00478 IMP dehydrogenase / GMP reductase domain NW313_RS10190 PF00571 CBS domain NW313_RS10195 PF13742 OB-fold nucleic acid binding domain NW313_RS10195 PF02601 Exonuclease VII, large subunit NW313_RS10210 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NW313_RS10210 PF01926 50S ribosome-binding GTPase NW313_RS10215 PF13360 PQQ-like domain NW313_RS10220 PF09976 Tetratricopeptide repeat-like domain NW313_RS10225 PF03129 Anticodon binding domain NW313_RS10225 PF13393 Histidyl-tRNA synthetase NW313_RS10230 PF04551 GcpE protein NW313_RS10235 PF13464 Domain of unknown function (DUF4115) NW313_RS10240 PF04055 Radical SAM superfamily NW313_RS10245 PF00334 Nucleoside diphosphate kinase NW313_RS10250 PF12404 Peptidase NW313_RS10250 PF00883 Cytosol aminopeptidase family, catalytic domain NW313_RS10255 PF04384 Iron-sulphur cluster assembly NW313_RS10260 PF00111 2Fe-2S iron-sulfur cluster binding domain NW313_RS10265 PF00012 Hsp70 protein NW313_RS10270 PF00226 DnaJ domain NW313_RS10270 PF07743 HSCB C-terminal oligomerisation domain NW313_RS10275 PF01521 Iron-sulphur cluster biosynthesis NW313_RS10280 PF01592 NifU-like N terminal domain NW313_RS10285 PF00266 Aminotransferase class-V NW313_RS10290 PF02082 Transcriptional regulator NW313_RS10295 PF00588 SpoU rRNA Methylase family NW313_RS10300 PF00459 Inositol monophosphatase family NW313_RS10305 PF07549 SecD/SecF GG Motif NW313_RS10305 PF02355 Protein export membrane protein NW313_RS10310 PF02355 Protein export membrane protein NW313_RS10310 PF07549 SecD/SecF GG Motif NW313_RS10310 PF13721 SecD export protein N-terminal TM region NW313_RS10315 PF02699 Preprotein translocase subunit NW313_RS10320 PF01702 Queuine tRNA-ribosyltransferase NW313_RS10325 PF02547 Queuosine biosynthesis protein NW313_RS10330 PF00571 CBS domain NW313_RS10335 PF00463 Isocitrate lyase family NW313_RS10340 PF01274 Malate synthase NW313_RS10345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS10345 PF03466 LysR substrate binding domain NW313_RS10350 PF10417 C-terminal domain of 1-Cys peroxiredoxin NW313_RS10350 PF00578 AhpC/TSA family NW313_RS10355 PF03932 CutC family NW313_RS10360 PF03976 Polyphosphate kinase 2 (PPK2) NW313_RS10365 PF01895 PhoU domain NW313_RS10370 PF00005 ABC transporter NW313_RS10375 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS10380 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS10385 PF02503 Polyphosphate kinase middle domain NW313_RS10385 PF13090 Polyphosphate kinase C-terminal domain 2 NW313_RS10385 PF17941 Polyphosphate kinase C-terminal domain 1 NW313_RS10385 PF13089 Polyphosphate kinase N-terminal domain NW313_RS10390 PF02541 Ppx/GppA phosphatase family NW313_RS10395 PF12849 PBP superfamily domain NW313_RS10400 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS10400 PF00989 PAS fold NW313_RS10400 PF11808 Phosphate regulon sensor protein PhoR NW313_RS10400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS10405 PF00072 Response regulator receiver domain NW313_RS10405 PF00486 Transcriptional regulatory protein, C terminal NW313_RS10410 PF04381 Putative exonuclease, RdgC NW313_RS10415 PF01136 Peptidase family U32 NW313_RS10415 PF16325 Peptidase family U32 C-terminal domain NW313_RS10420 PF00037 4Fe-4S binding domain NW313_RS10425 PF00881 Nitroreductase family NW313_RS10460 PF00004 ATPase family associated with various cellular activities (AAA) NW313_RS10460 PF07724 AAA domain (Cdc48 subfamily) NW313_RS10460 PF17871 AAA lid domain NW313_RS10460 PF02861 Clp amino terminal domain, pathogenicity island component NW313_RS10460 PF10431 C-terminal, D2-small domain, of ClpB protein NW313_RS10465 PF02578 Multi-copper polyphenol oxidoreductase laccase NW313_RS10470 PF00849 RNA pseudouridylate synthase NW313_RS10470 PF01479 S4 domain NW313_RS10475 PF13525 Outer membrane lipoprotein NW313_RS10480 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NW313_RS10485 PF01817 Chorismate mutase type II NW313_RS10485 PF00800 Prephenate dehydratase NW313_RS10490 PF13416 Bacterial extracellular solute-binding protein NW313_RS10495 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS10495 PF00563 EAL domain NW313_RS10500 PF01931 Protein of unknown function DUF84 NW313_RS10505 PF01371 Trp repressor protein NW313_RS10510 PF01464 Transglycosylase SLT domain NW313_RS10510 PF14718 Soluble lytic murein transglycosylase L domain NW313_RS10515 PF00005 ABC transporter NW313_RS10515 PF12848 ABC transporter NW313_RS10520 PF07238 PilZ domain NW313_RS10525 PF01817 Chorismate mutase type II NW313_RS10525 PF02153 Prephenate dehydrogenase NW313_RS10530 PF00793 DAHP synthetase I family NW313_RS10535 PF07694 5TMR of 5TMR-LYT NW313_RS10535 PF06580 Histidine kinase NW313_RS10540 PF00072 Response regulator receiver domain NW313_RS10540 PF04397 LytTr DNA-binding domain NW313_RS10545 PF00933 Glycosyl hydrolase family 3 N terminal domain NW313_RS10550 PF03702 Anhydro-N-acetylmuramic acid kinase NW313_RS10555 PF13580 SIS domain NW313_RS10570 PF02554 Carbon starvation protein CstA NW313_RS10575 PF02401 LytB protein NW313_RS10580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NW313_RS10585 PF01252 Signal peptidase (SPase) II NW313_RS10590 PF06827 Zinc finger found in FPG and IleRS NW313_RS10590 PF00133 tRNA synthetases class I (I, L, M and V) NW313_RS10590 PF08264 Anticodon-binding domain of tRNA NW313_RS10595 PF06574 FAD synthetase NW313_RS10595 PF01687 Riboflavin kinase NW313_RS10600 PF03023 Lipid II flippase MurJ NW313_RS10605 PF01649 Ribosomal protein S20 NW313_RS10610 PF01022 Bacterial regulatory protein, arsR family NW313_RS10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS10615 PF03466 LysR substrate binding domain NW313_RS10620 PF02690 Na+/Pi-cotransporter NW313_RS10625 PF00303 Thymidylate synthase NW313_RS10630 PF01790 Prolipoprotein diacylglyceryl transferase NW313_RS10635 PF01925 Sulfite exporter TauE/SafE NW313_RS10640 PF02896 PEP-utilising enzyme, TIM barrel domain NW313_RS10640 PF01590 GAF domain NW313_RS10640 PF00391 PEP-utilising enzyme, mobile domain NW313_RS10640 PF05524 PEP-utilising enzyme, N-terminal NW313_RS10645 PF00293 NUDIX domain NW313_RS10650 PF02976 DNA mismatch repair enzyme MutH NW313_RS10655 PF00248 Aldo/keto reductase family NW313_RS10665 PF02954 Bacterial regulatory protein, Fis family NW313_RS10665 PF00072 Response regulator receiver domain NW313_RS10665 PF00158 Sigma-54 interaction domain NW313_RS10670 PF00152 tRNA synthetases class II (D, K and N) NW313_RS10670 PF01336 OB-fold nucleic acid binding domain NW313_RS10680 PF05525 Branched-chain amino acid transport protein NW313_RS10685 PF05175 Methyltransferase small domain NW313_RS10690 PF00270 DEAD/DEAH box helicase NW313_RS10690 PF00271 Helicase conserved C-terminal domain NW313_RS10695 PF00009 Elongation factor Tu GTP binding domain NW313_RS10695 PF03144 Elongation factor Tu domain 2 NW313_RS10695 PF16658 Class II release factor RF3, C-terminal domain NW313_RS10700 PF01381 Helix-turn-helix NW313_RS10700 PF00717 Peptidase S24-like NW313_RS10745 PF06122 Conjugative relaxosome accessory transposon protein NW313_RS10755 PF00589 Phage integrase family NW313_RS10755 PF13495 Phage integrase, N-terminal SAM-like domain NW313_RS10760 PF00186 Dihydrofolate reductase NW313_RS10780 PF12833 Helix-turn-helix domain NW313_RS10805 PF04002 RadC-like JAB domain NW313_RS10810 PF00092 von Willebrand factor type A domain NW313_RS10830 PF07728 AAA domain (dynein-related subfamily) NW313_RS10850 PF00436 Single-strand binding protein family NW313_RS10865 PF04231 Endonuclease I NW313_RS10875 PF00665 Integrase core domain NW313_RS10880 PF01695 IstB-like ATP binding protein NW313_RS10890 PF06986 Type-1V conjugative transfer system mating pair stabilisation NW313_RS10895 PF06834 TraU protein NW313_RS10905 PF10502 Signal peptidase, peptidase S26 NW313_RS10920 PF13098 Thioredoxin-like domain NW313_RS10920 PF10411 Disulfide bond isomerase protein N-terminus NW313_RS11040 PF00929 Exonuclease NW313_RS11040 PF02811 PHP domain NW313_RS11040 PF14579 Helix-hairpin-helix motif NW313_RS11040 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NW313_RS11040 PF07733 Bacterial DNA polymerase III alpha NTPase domain NW313_RS11040 PF11490 DNA polymerase III polC-type N-terminus II NW313_RS11050 PF00717 Peptidase S24-like NW313_RS11065 PF00872 Transposase, Mutator family NW313_RS11075 PF00809 Pterin binding enzyme NW313_RS11080 PF01636 Phosphotransferase enzyme family NW313_RS11085 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase NW313_RS11095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS11095 PF03466 LysR substrate binding domain NW313_RS11100 PF07690 Major Facilitator Superfamily NW313_RS11125 PF01526 Tn3 transposase DDE domain NW313_RS11125 PF13700 Domain of unknown function (DUF4158) NW313_RS11130 PF11799 impB/mucB/samB family C-terminal domain NW313_RS11130 PF13438 Domain of unknown function (DUF4113) NW313_RS11130 PF00817 impB/mucB/samB family NW313_RS11165 PF03707 Bacterial signalling protein N terminal repeat NW313_RS11165 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS11165 PF00563 EAL domain NW313_RS11180 PF13508 Acetyltransferase (GNAT) domain NW313_RS11185 PF02036 SCP-2 sterol transfer family NW313_RS11190 PF00563 EAL domain NW313_RS11190 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS11190 PF03707 Bacterial signalling protein N terminal repeat NW313_RS11195 PF01136 Peptidase family U32 NW313_RS11200 PF01136 Peptidase family U32 NW313_RS11215 PF13181 Tetratricopeptide repeat NW313_RS11215 PF07719 Tetratricopeptide repeat NW313_RS11220 PF00013 KH domain NW313_RS11220 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NW313_RS11220 PF01138 3' exoribonuclease family, domain 1 NW313_RS11220 PF03725 3' exoribonuclease family, domain 2 NW313_RS11220 PF00575 S1 RNA binding domain NW313_RS11225 PF00312 Ribosomal protein S15 NW313_RS11230 PF09157 Pseudouridine synthase II TruB, C-terminal NW313_RS11230 PF16198 tRNA pseudouridylate synthase B C-terminal domain NW313_RS11230 PF01509 TruB family pseudouridylate synthase (N terminal domain) NW313_RS11235 PF02033 Ribosome-binding factor A NW313_RS11240 PF08364 Bacterial translation initiation factor IF-2 associated region NW313_RS11240 PF04760 Translation initiation factor IF-2, N-terminal region NW313_RS11240 PF00009 Elongation factor Tu GTP binding domain NW313_RS11240 PF11987 Translation-initiation factor 2 NW313_RS11245 PF13184 NusA-like KH domain NW313_RS11245 PF08529 NusA N-terminal domain NW313_RS11245 PF00575 S1 RNA binding domain NW313_RS11250 PF02576 RimP N-terminal domain NW313_RS11250 PF17384 RimP C-terminal SH3 domain NW313_RS11265 PF03840 Preprotein translocase SecG subunit NW313_RS11270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NW313_RS11270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NW313_RS11270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NW313_RS11270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NW313_RS11275 PF00809 Pterin binding enzyme NW313_RS11280 PF01434 Peptidase family M41 NW313_RS11280 PF06480 FtsH Extracellular NW313_RS11280 PF17862 AAA+ lid domain NW313_RS11280 PF00004 ATPase family associated with various cellular activities (AAA) NW313_RS11285 PF01728 FtsJ-like methyltransferase NW313_RS11290 PF01985 CRS1 / YhbY (CRM) domain NW313_RS11295 PF03449 Transcription elongation factor, N-terminal NW313_RS11295 PF01272 Transcription elongation factor, GreA/GreB, C-term NW313_RS11300 PF13609 Gram-negative porin NW313_RS11305 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NW313_RS11310 PF00579 tRNA synthetases class I (W and Y) NW313_RS11310 PF01479 S4 domain NW313_RS11315 PF04225 Opacity-associated protein A LysM-like domain NW313_RS11315 PF01551 Peptidase family M23 NW313_RS11320 PF00873 AcrB/AcrD/AcrF family NW313_RS11330 PF01521 Iron-sulphur cluster biosynthesis NW313_RS11335 PF00202 Aminotransferase class-III NW313_RS11340 PF01594 AI-2E family transporter NW313_RS11345 PF08468 Methyltransferase small domain N-terminal NW313_RS11345 PF05175 Methyltransferase small domain NW313_RS11350 PF09308 LuxQ, periplasmic NW313_RS11350 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS11350 PF00072 Response regulator receiver domain NW313_RS11355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW313_RS11360 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS11365 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS11365 PF12911 N-terminal TM domain of oligopeptide transport permease C NW313_RS11370 PF00005 ABC transporter NW313_RS11370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW313_RS11375 PF00005 ABC transporter NW313_RS11375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW313_RS11385 PF01869 BadF/BadG/BcrA/BcrD ATPase family NW313_RS11390 PF00728 Glycosyl hydrolase family 20, catalytic domain NW313_RS11390 PF02838 Glycosyl hydrolase family 20, domain 2 NW313_RS11395 PF06165 Glycosyltransferase family 36 NW313_RS11395 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NW313_RS11400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NW313_RS11400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NW313_RS11400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NW313_RS11400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NW313_RS11405 PF00005 ABC transporter NW313_RS11405 PF08402 TOBE domain NW313_RS11415 PF13416 Bacterial extracellular solute-binding protein NW313_RS11420 PF00909 Ammonium Transporter Family NW313_RS11425 PF00543 Nitrogen regulatory protein P-II NW313_RS11430 PF06062 Uncharacterised protein family (UPF0231) NW313_RS11435 PF00330 Aconitase family (aconitate hydratase) NW313_RS11435 PF06434 Aconitate hydratase 2 N-terminus NW313_RS11435 PF11791 Aconitate B N-terminal domain NW313_RS11440 PF01734 Patatin-like phospholipase NW313_RS11445 PF00912 Transglycosylase NW313_RS11445 PF00905 Penicillin binding protein transpeptidase domain NW313_RS11445 PF14814 Bifunctional transglycosylase second domain NW313_RS11450 PF00270 DEAD/DEAH box helicase NW313_RS11450 PF04408 Helicase associated domain (HA2) NW313_RS11450 PF00271 Helicase conserved C-terminal domain NW313_RS11450 PF08482 ATP-dependent helicase C-terminal NW313_RS11460 PF03749 Sugar fermentation stimulation protein RE domain NW313_RS11460 PF17746 SfsA N-terminal OB domain NW313_RS11465 PF01258 Prokaryotic dksA/traR C4-type zinc finger NW313_RS11470 PF00749 tRNA synthetases class I (E and Q), catalytic domain NW313_RS11475 PF01743 Poly A polymerase head domain NW313_RS11475 PF12626 Polymerase A arginine-rich C-terminus NW313_RS11475 PF12627 Probable RNA and SrmB- binding site of polymerase A NW313_RS11480 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NW313_RS11485 PF02548 Ketopantoate hydroxymethyltransferase NW313_RS11490 PF02569 Pantoate-beta-alanine ligase NW313_RS11495 PF01061 ABC-2 type transporter NW313_RS11500 PF00005 ABC transporter NW313_RS11505 PF01740 STAS domain NW313_RS11505 PF00916 Sulfate permease family NW313_RS11510 PF00484 Carbonic anhydrase NW313_RS11515 PF00156 Phosphoribosyl transferase domain NW313_RS11520 PF00440 Bacterial regulatory proteins, tetR family NW313_RS11525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW313_RS11530 PF04348 LppC putative lipoprotein NW313_RS11535 PF02021 Uncharacterised protein family UPF0102 NW313_RS11540 PF13580 SIS domain NW313_RS11545 PF04972 BON domain NW313_RS11550 PF04386 Stringent starvation protein B NW313_RS11555 PF00043 Glutathione S-transferase, C-terminal domain NW313_RS11555 PF02798 Glutathione S-transferase, N-terminal domain NW313_RS11560 PF02167 Cytochrome C1 family NW313_RS11565 PF00032 Cytochrome b(C-terminal)/b6/petD NW313_RS11565 PF00033 Cytochrome b/b6/petB NW313_RS11570 PF00355 Rieske [2Fe-2S] domain NW313_RS11570 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NW313_RS11575 PF00380 Ribosomal protein S9/S16 NW313_RS11580 PF00572 Ribosomal protein L13 NW313_RS11585 PF03969 AFG1-like ATPase NW313_RS11595 PF00595 PDZ domain NW313_RS11600 PF13180 PDZ domain NW313_RS11605 PF01245 Ribosomal protein L19 NW313_RS11610 PF01746 tRNA (Guanine-1)-methyltransferase NW313_RS11615 PF05239 PRC-barrel domain NW313_RS11615 PF01782 RimM N-terminal domain NW313_RS11620 PF00886 Ribosomal protein S16 NW313_RS11625 PF02978 Signal peptide binding domain NW313_RS11625 PF00448 SRP54-type protein, GTPase domain NW313_RS11625 PF02881 SRP54-type protein, helical bundle domain NW313_RS11630 PF01578 Cytochrome C assembly protein NW313_RS11635 PF00571 CBS domain NW313_RS11635 PF03471 Transporter associated domain NW313_RS11635 PF01595 Cyclin M transmembrane N-terminal domain NW313_RS11640 PF02664 S-Ribosylhomocysteinase (LuxS) NW313_RS11645 PF04262 Glutamate-cysteine ligase NW313_RS11650 PF00675 Insulinase (Peptidase family M16) NW313_RS11650 PF05193 Peptidase M16 inactive domain NW313_RS11655 PF09335 SNARE associated Golgi protein NW313_RS11660 PF08240 Alcohol dehydrogenase GroES-like domain NW313_RS11660 PF00107 Zinc-binding dehydrogenase NW313_RS11665 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit NW313_RS11670 PF00682 HMGL-like NW313_RS11670 PF02436 Conserved carboxylase domain NW313_RS11670 PF00364 Biotin-requiring enzyme NW313_RS11675 PF04277 Oxaloacetate decarboxylase, gamma chain NW313_RS11710 PF02599 Global regulator protein family NW313_RS11715 PF00696 Amino acid kinase family NW313_RS11715 PF01842 ACT domain NW313_RS11715 PF13840 ACT domain NW313_RS11720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NW313_RS11720 PF01411 tRNA synthetases class II (A) NW313_RS11720 PF02272 DHHA1 domain NW313_RS11725 PF02631 RecX family NW313_RS11730 PF00154 recA bacterial DNA recombination protein NW313_RS11735 PF02464 Competence-damaged protein NW313_RS11740 PF12857 TOBE-like domain NW313_RS11740 PF00005 ABC transporter NW313_RS11745 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS11750 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS11760 PF00291 Pyridoxal-phosphate dependent enzyme NW313_RS11765 PF01624 MutS domain I NW313_RS11765 PF05188 MutS domain II NW313_RS11765 PF05192 MutS domain III NW313_RS11765 PF05190 MutS family domain IV NW313_RS11765 PF00488 MutS domain V NW313_RS11770 PF04545 Sigma-70, region 4 NW313_RS11770 PF04542 Sigma-70 region 2 NW313_RS11770 PF00140 Sigma-70 factor, region 1.2 NW313_RS11770 PF04539 Sigma-70 region 3 NW313_RS11775 PF01476 LysM domain NW313_RS11775 PF01551 Peptidase family M23 NW313_RS11785 PF01975 Survival protein SurE NW313_RS11790 PF01142 tRNA pseudouridine synthase D (TruD) NW313_RS11795 PF02542 YgbB family NW313_RS11800 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NW313_RS11805 PF04977 Septum formation initiator NW313_RS11810 PF02673 Bacitracin resistance protein BacA NW313_RS11815 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NW313_RS11820 PF02152 Dihydroneopterin aldolase NW313_RS11825 PF02660 Glycerol-3-phosphate acyltransferase NW313_RS11830 PF00561 alpha/beta hydrolase fold NW313_RS11835 PF00814 Glycoprotease family NW313_RS11840 PF01165 Ribosomal protein S21 NW313_RS11845 PF09424 Yqey-like protein NW313_RS11850 PF08278 DNA primase DnaG DnaB-binding NW313_RS11850 PF10410 DnaB-helicase binding domain of primase NW313_RS11850 PF08275 DNA primase catalytic core, N-terminal domain NW313_RS11850 PF01807 CHC2 zinc finger NW313_RS11855 PF00140 Sigma-70 factor, region 1.2 NW313_RS11855 PF04542 Sigma-70 region 2 NW313_RS11855 PF04539 Sigma-70 region 3 NW313_RS11855 PF04545 Sigma-70, region 4 NW313_RS11855 PF04546 Sigma-70, non-essential region NW313_RS11855 PF03979 Sigma-70 factor, region 1.1 NW313_RS11865 PF13356 Arm DNA-binding domain NW313_RS11865 PF00589 Phage integrase family NW313_RS11870 PF00563 EAL domain NW313_RS11870 PF08668 HDOD domain NW313_RS11875 PF02743 Cache domain NW313_RS11875 PF00672 HAMP domain NW313_RS11875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS11880 PF12833 Helix-turn-helix domain NW313_RS11925 PF03480 Bacterial extracellular solute-binding protein, family 7 NW313_RS11930 PF01380 SIS domain NW313_RS11935 PF08220 DeoR-like helix-turn-helix domain NW313_RS11935 PF00455 DeoR C terminal sensor domain NW313_RS11940 PF00224 Pyruvate kinase, barrel domain NW313_RS11940 PF02887 Pyruvate kinase, alpha/beta domain NW313_RS11945 PF04402 Protein of unknown function (DUF541) NW313_RS11950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS11950 PF03466 LysR substrate binding domain NW313_RS11955 PF01810 LysE type translocator NW313_RS11960 PF00924 Mechanosensitive ion channel NW313_RS11960 PF05552 Conserved TM helix NW313_RS11965 PF01116 Fructose-bisphosphate aldolase class-II NW313_RS11970 PF00162 Phosphoglycerate kinase NW313_RS11975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NW313_RS11975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NW313_RS11980 PF07715 TonB-dependent Receptor Plug Domain NW313_RS11980 PF00593 TonB dependent receptor NW313_RS11985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS11985 PF03466 LysR substrate binding domain NW313_RS11990 PF02779 Transketolase, pyrimidine binding domain NW313_RS11990 PF02780 Transketolase, C-terminal domain NW313_RS11990 PF00456 Transketolase, thiamine diphosphate binding domain NW313_RS11995 PF02773 S-adenosylmethionine synthetase, C-terminal domain NW313_RS11995 PF02772 S-adenosylmethionine synthetase, central domain NW313_RS11995 PF00438 S-adenosylmethionine synthetase, N-terminal domain NW313_RS12000 PF10263 SprT-like family NW313_RS12000 PF17283 SprT-like zinc ribbon domain NW313_RS12005 PF04231 Endonuclease I NW313_RS12010 PF04452 RNA methyltransferase NW313_RS12015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NW313_RS12015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NW313_RS12020 PF02622 Uncharacterized ACR, COG1678 NW313_RS12025 PF03652 Holliday junction resolvase NW313_RS12030 PF01479 S4 domain NW313_RS12030 PF00579 tRNA synthetases class I (W and Y) NW313_RS12040 PF00437 Type II/IV secretion system protein NW313_RS12045 PF00437 Type II/IV secretion system protein NW313_RS12050 PF01168 Alanine racemase, N-terminal domain NW313_RS12055 PF14748 Pyrroline-5-carboxylate reductase dimerisation NW313_RS12055 PF03807 NADP oxidoreductase coenzyme F420-dependent NW313_RS12060 PF02325 YGGT family NW313_RS12065 PF02594 Uncharacterised ACR, YggU family COG1872 NW313_RS12075 PF01725 Ham1 family NW313_RS12080 PF06969 HemN C-terminal domain NW313_RS12080 PF04055 Radical SAM superfamily NW313_RS12085 PF04960 Glutaminase NW313_RS12090 PF02390 Putative methyltransferase NW313_RS12095 PF00633 Helix-hairpin-helix motif NW313_RS12095 PF14815 NUDIX domain NW313_RS12095 PF10576 Iron-sulfur binding domain of endonuclease III NW313_RS12095 PF00730 HhH-GPD superfamily base excision DNA repair protein NW313_RS12100 PF04362 Bacterial Fe(2+) trafficking NW313_RS12105 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NW313_RS12105 PF01464 Transglycosylase SLT domain NW313_RS12130 PF12729 Four helix bundle sensory module for signal transduction NW313_RS12130 PF00672 HAMP domain NW313_RS12130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS12160 PF00226 DnaJ domain NW313_RS12160 PF05099 Tellurite resistance protein TerB NW313_RS12165 PF04453 LPS transport system D NW313_RS12165 PF03968 OstA-like protein NW313_RS12170 PF09312 SurA N-terminal domain NW313_RS12175 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NW313_RS12180 PF00398 Ribosomal RNA adenine dimethylase NW313_RS12185 PF04379 ApaG domain NW313_RS12190 PF00149 Calcineurin-like phosphoesterase NW313_RS12195 PF00186 Dihydrofolate reductase NW313_RS12200 PF12821 Threonine/Serine exporter, ThrE NW313_RS12205 PF06738 Putative threonine/serine exporter NW313_RS12210 PF01018 GTP1/OBG NW313_RS12210 PF01926 50S ribosome-binding GTPase NW313_RS12215 PF01016 Ribosomal L27 protein NW313_RS12220 PF00829 Ribosomal prokaryotic L21 protein NW313_RS12225 PF00348 Polyprenyl synthetase NW313_RS12235 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NW313_RS12235 PF00056 lactate/malate dehydrogenase, NAD binding domain NW313_RS12240 PF02863 Arginine repressor, C-terminal domain NW313_RS12240 PF01316 Arginine repressor, DNA binding domain NW313_RS12245 PF16868 NMT1-like family NW313_RS12255 PF00582 Universal stress protein family NW313_RS12270 PF06877 Regulator of ribonuclease activity B NW313_RS12280 PF01523 Putative modulator of DNA gyrase NW313_RS12285 PF00795 Carbon-nitrogen hydrolase NW313_RS12290 PF13502 AsmA-like C-terminal region NW313_RS12290 PF13116 Protein of unknown function NW313_RS12295 PF10150 Ribonuclease E/G family NW313_RS12295 PF00575 S1 RNA binding domain NW313_RS12300 PF02545 Maf-like protein NW313_RS12305 PF04093 rod shape-determining protein MreD NW313_RS12310 PF04085 rod shape-determining protein MreC NW313_RS12345 PF07963 Prokaryotic N-terminal methylation motif NW313_RS12350 PF07963 Prokaryotic N-terminal methylation motif NW313_RS12360 PF00482 Type II secretion system (T2SS), protein F NW313_RS12365 PF00437 Type II/IV secretion system protein NW313_RS12365 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NW313_RS12375 PF01471 Putative peptidoglycan binding domain NW313_RS12375 PF13401 AAA domain NW313_RS12380 PF11741 AMIN domain NW313_RS12380 PF00263 Bacterial type II and III secretion system protein NW313_RS12380 PF07660 Secretin and TonB N terminus short domain NW313_RS12380 PF03958 Bacterial type II/III secretion system short domain NW313_RS12400 PF00563 EAL domain NW313_RS12400 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS12400 PF17157 Gammaproteobacterial periplasmic sensor domain NW313_RS12405 PF00436 Single-strand binding protein family NW313_RS12410 PF00196 Bacterial regulatory proteins, luxR family NW313_RS12415 PF00483 Nucleotidyl transferase NW313_RS12420 PF00005 ABC transporter NW313_RS12420 PF17760 UvrA interaction domain NW313_RS12420 PF17755 UvrA DNA-binding domain NW313_RS12430 PF00266 Aminotransferase class-V NW313_RS12435 PF00696 Amino acid kinase family NW313_RS12435 PF01842 ACT domain NW313_RS12440 PF02310 B12 binding domain NW313_RS12440 PF02607 B12 binding domain NW313_RS12440 PF02965 Vitamin B12 dependent methionine synthase, activation domain NW313_RS12440 PF00809 Pterin binding enzyme NW313_RS12440 PF02574 Homocysteine S-methyltransferase NW313_RS12445 PF00999 Sodium/hydrogen exchanger family NW313_RS12510 PF01507 Phosphoadenosine phosphosulfate reductase family NW313_RS12515 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NW313_RS12515 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NW313_RS12520 PF00175 Oxidoreductase NAD-binding domain NW313_RS12520 PF00667 FAD binding domain NW313_RS12520 PF00258 Flavodoxin NW313_RS12540 PF09583 Phage shock protein G (Phageshock_PspG) NW313_RS12545 PF01207 Dihydrouridine synthase (Dus) NW313_RS12550 PF01475 Ferric uptake regulator family NW313_RS12560 PF12706 Beta-lactamase superfamily domain NW313_RS12565 PF00342 Phosphoglucose isomerase NW313_RS12570 PF01894 Uncharacterised protein family UPF0047 NW313_RS12575 PF00842 Alanine racemase, C-terminal domain NW313_RS12575 PF01168 Alanine racemase, N-terminal domain NW313_RS12580 PF00772 DnaB-like helicase N terminal domain NW313_RS12580 PF03796 DnaB-like helicase C terminal domain NW313_RS12590 PF01281 Ribosomal protein L9, N-terminal domain NW313_RS12590 PF03948 Ribosomal protein L9, C-terminal domain NW313_RS12595 PF01084 Ribosomal protein S18 NW313_RS12600 PF00436 Single-strand binding protein family NW313_RS12605 PF01250 Ribosomal protein S6 NW313_RS12610 PF00210 Ferritin-like domain NW313_RS12615 PF04324 BFD-like [2Fe-2S] binding domain NW313_RS12620 PF00009 Elongation factor Tu GTP binding domain NW313_RS12620 PF03144 Elongation factor Tu domain 2 NW313_RS12620 PF03143 Elongation factor Tu C-terminal domain NW313_RS12625 PF00679 Elongation factor G C-terminus NW313_RS12625 PF14492 Elongation Factor G, domain II NW313_RS12625 PF03764 Elongation factor G, domain IV NW313_RS12625 PF00009 Elongation factor Tu GTP binding domain NW313_RS12625 PF03144 Elongation factor Tu domain 2 NW313_RS12630 PF00177 Ribosomal protein S7p/S5e NW313_RS12635 PF00164 Ribosomal protein S12/S23 NW313_RS12645 PF02635 DsrE/DsrF-like family NW313_RS12650 PF02635 DsrE/DsrF-like family NW313_RS12655 PF13309 HTH domain NW313_RS12655 PF08348 YheO-like PAS domain NW313_RS12660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NW313_RS12660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NW313_RS12670 PF04102 SlyX NW313_RS12675 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) NW313_RS12680 PF01145 SPFH domain / Band 7 family NW313_RS12685 PF01145 SPFH domain / Band 7 family NW313_RS12685 PF12221 Bacterial membrane protein N terminal NW313_RS12690 PF16360 GTP-binding GTPase Middle Region NW313_RS12690 PF13167 GTP-binding GTPase N-terminal NW313_RS12690 PF01926 50S ribosome-binding GTPase NW313_RS12695 PF17209 Hfq protein NW313_RS12705 PF01119 DNA mismatch repair protein, C-terminal domain NW313_RS12705 PF08676 MutL C terminal dimerisation domain NW313_RS12710 PF01520 N-acetylmuramoyl-L-alanine amidase NW313_RS12715 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NW313_RS12720 PF08331 Domain of unknown function (DUF1730) NW313_RS12760 PF00929 Exonuclease NW313_RS12765 PF03193 RsgA GTPase NW313_RS12770 PF02666 Phosphatidylserine decarboxylase NW313_RS12775 PF00939 Sodium:sulfate symporter transmembrane region NW313_RS12785 PF01676 Metalloenzyme superfamily NW313_RS12785 PF06415 BPG-independent PGAM N-terminus (iPGM_N) NW313_RS12790 PF01551 Peptidase family M23 NW313_RS12800 PF00440 Bacterial regulatory proteins, tetR family NW313_RS12800 PF08360 QacR-like protein, C-terminal region NW313_RS12805 PF01208 Uroporphyrinogen decarboxylase (URO-D) NW313_RS12810 PF09297 NADH pyrophosphatase zinc ribbon domain NW313_RS12810 PF00293 NUDIX domain NW313_RS12815 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ NW313_RS12820 PF05000 RNA polymerase Rpb1, domain 4 NW313_RS12820 PF04998 RNA polymerase Rpb1, domain 5 NW313_RS12820 PF00623 RNA polymerase Rpb1, domain 2 NW313_RS12820 PF04983 RNA polymerase Rpb1, domain 3 NW313_RS12820 PF04997 RNA polymerase Rpb1, domain 1 NW313_RS12825 PF04560 RNA polymerase Rpb2, domain 7 NW313_RS12825 PF04563 RNA polymerase beta subunit NW313_RS12825 PF04561 RNA polymerase Rpb2, domain 2 NW313_RS12825 PF04565 RNA polymerase Rpb2, domain 3 NW313_RS12825 PF10385 RNA polymerase beta subunit external 1 domain NW313_RS12825 PF00562 RNA polymerase Rpb2, domain 6 NW313_RS12830 PF00542 Ribosomal protein L7/L12 C-terminal domain NW313_RS12830 PF16320 Ribosomal protein L7/L12 dimerisation domain NW313_RS12835 PF00466 Ribosomal protein L10 NW313_RS12840 PF00687 Ribosomal protein L1p/L10e family NW313_RS12845 PF03946 Ribosomal protein L11, N-terminal domain NW313_RS12845 PF00298 Ribosomal protein L11, RNA binding domain NW313_RS12850 PF00467 KOW motif NW313_RS12850 PF02357 Transcription termination factor nusG NW313_RS12855 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NW313_RS12860 PF03144 Elongation factor Tu domain 2 NW313_RS12860 PF03143 Elongation factor Tu C-terminal domain NW313_RS12860 PF00009 Elongation factor Tu GTP binding domain NW313_RS12885 PF00485 Phosphoribulokinase / Uridine kinase family NW313_RS12890 PF02237 Biotin protein ligase C terminal domain NW313_RS12890 PF03099 Biotin/lipoate A/B protein ligase family NW313_RS12890 PF08279 HTH domain NW313_RS12895 PF01565 FAD binding domain NW313_RS12895 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NW313_RS12905 PF13091 PLD-like domain NW313_RS12940 PF00175 Oxidoreductase NAD-binding domain NW313_RS12945 PF00970 Oxidoreductase FAD-binding domain NW313_RS12945 PF00111 2Fe-2S iron-sulfur cluster binding domain NW313_RS12945 PF00175 Oxidoreductase NAD-binding domain NW313_RS12950 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NW313_RS12960 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW313_RS12960 PF07498 Rho termination factor, N-terminal domain NW313_RS12960 PF07497 Rho termination factor, RNA-binding domain NW313_RS12965 PF00085 Thioredoxin NW313_RS12970 PF00271 Helicase conserved C-terminal domain NW313_RS12970 PF00270 DEAD/DEAH box helicase NW313_RS12975 PF02541 Ppx/GppA phosphatase family NW313_RS12980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS12980 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS12980 PF09456 RcsC Alpha-Beta-Loop (ABL) NW313_RS12980 PF00072 Response regulator receiver domain NW313_RS12985 PF12832 MFS_1 like family NW313_RS13000 PF16177 Acetyl-coenzyme A synthetase N-terminus NW313_RS13000 PF13193 AMP-binding enzyme C-terminal domain NW313_RS13000 PF00501 AMP-binding enzyme NW313_RS13005 PF01220 Dehydroquinase class II NW313_RS13010 PF00364 Biotin-requiring enzyme NW313_RS13015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NW313_RS13015 PF00289 Biotin carboxylase, N-terminal domain NW313_RS13015 PF02785 Biotin carboxylase C-terminal domain NW313_RS13025 PF01207 Dihydrouridine synthase (Dus) NW313_RS13030 PF02954 Bacterial regulatory protein, Fis family NW313_RS13035 PF00356 Bacterial regulatory proteins, lacI family NW313_RS13035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NW313_RS13040 PF00920 Dehydratase family NW313_RS13045 PF01202 Shikimate kinase NW313_RS13050 PF02447 GntP family permease NW313_RS13055 PF01081 KDPG and KHG aldolase NW313_RS13075 PF17200 Single Cache domain 2 NW313_RS13075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS13075 PF00672 HAMP domain NW313_RS13080 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NW313_RS13080 PF01276 Orn/Lys/Arg decarboxylase, major domain NW313_RS13080 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NW313_RS13085 PF13520 Amino acid permease NW313_RS13090 PF18500 CadC C-terminal domain 1 NW313_RS13090 PF00486 Transcriptional regulatory protein, C terminal NW313_RS13095 PF13411 MerR HTH family regulatory protein NW313_RS13105 PF01808 AICARFT/IMPCHase bienzyme NW313_RS13105 PF02142 MGS-like domain NW313_RS13110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NW313_RS13110 PF02843 Phosphoribosylglycinamide synthetase, C domain NW313_RS13110 PF02844 Phosphoribosylglycinamide synthetase, N domain NW313_RS13120 PF00216 Bacterial DNA-binding protein NW313_RS13125 PF00571 CBS domain NW313_RS13125 PF01595 Cyclin M transmembrane N-terminal domain NW313_RS13130 PF00480 ROK family NW313_RS13135 PF01238 Phosphomannose isomerase type I NW313_RS13140 PF04222 Protein of unknown function (DUF416) NW313_RS13145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW313_RS13150 PF03167 Uracil DNA glycosylase superfamily NW313_RS13155 PF00924 Mechanosensitive ion channel NW313_RS13160 PF10996 Beta-Casp domain NW313_RS13160 PF00753 Metallo-beta-lactamase superfamily NW313_RS13160 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NW313_RS13165 PF02397 Bacterial sugar transferase NW313_RS13170 PF01370 NAD dependent epimerase/dehydratase family NW313_RS13175 PF02719 Polysaccharide biosynthesis protein NW313_RS13200 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS13210 PF00171 Aldehyde dehydrogenase family NW313_RS13210 PF00465 Iron-containing alcohol dehydrogenase NW313_RS13215 PF00501 AMP-binding enzyme NW313_RS13215 PF13193 AMP-binding enzyme C-terminal domain NW313_RS13225 PF00005 ABC transporter NW313_RS13225 PF14524 Wzt C-terminal domain NW313_RS13240 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NW313_RS13245 PF16363 GDP-mannose 4,6 dehydratase NW313_RS13250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NW313_RS13250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NW313_RS13250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NW313_RS13250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NW313_RS13255 PF00483 Nucleotidyl transferase NW313_RS13255 PF01050 Mannose-6-phosphate isomerase NW313_RS13260 PF01370 NAD dependent epimerase/dehydratase family NW313_RS13265 PF01522 Polysaccharide deacetylase NW313_RS13265 PF00457 Glycosyl hydrolases family 11 NW313_RS13280 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NW313_RS13290 PF04488 Glycosyltransferase sugar-binding region containing DXD motif NW313_RS13295 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NW313_RS13330 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NW313_RS13335 PF00535 Glycosyl transferase family 2 NW313_RS13340 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NW313_RS13345 PF01467 Cytidylyltransferase-like NW313_RS13350 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NW313_RS13350 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NW313_RS13350 PF06827 Zinc finger found in FPG and IleRS NW313_RS13360 PF00471 Ribosomal protein L33 NW313_RS13365 PF00830 Ribosomal L28 family NW313_RS13370 PF04002 RadC-like JAB domain NW313_RS13375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS13375 PF00672 HAMP domain NW313_RS13375 PF02743 Cache domain NW313_RS13380 PF04127 DNA / pantothenate metabolism flavoprotein NW313_RS13380 PF02441 Flavoprotein NW313_RS13390 PF00440 Bacterial regulatory proteins, tetR family NW313_RS13395 PF03279 Bacterial lipid A biosynthesis acyltransferase NW313_RS13400 PF03279 Bacterial lipid A biosynthesis acyltransferase NW313_RS13405 PF00156 Phosphoribosyl transferase domain NW313_RS13410 PF01138 3' exoribonuclease family, domain 1 NW313_RS13410 PF03725 3' exoribonuclease family, domain 2 NW313_RS13415 PF08340 Domain of unknown function (DUF1732) NW313_RS13415 PF03755 YicC-like family, N-terminal region NW313_RS13420 PF03350 Uncharacterized protein family, UPF0114 NW313_RS13425 PF00367 phosphotransferase system, EIIB NW313_RS13425 PF02378 Phosphotransferase system, EIIC NW313_RS13430 PF13580 SIS domain NW313_RS13435 PF01380 SIS domain NW313_RS13435 PF01418 Helix-turn-helix domain, rpiR family NW313_RS13440 PF01032 FecCD transport family NW313_RS13445 PF01497 Periplasmic binding protein NW313_RS13450 PF00005 ABC transporter NW313_RS13455 PF07715 TonB-dependent Receptor Plug Domain NW313_RS13455 PF00593 TonB dependent receptor NW313_RS13460 PF00664 ABC transporter transmembrane region NW313_RS13460 PF00005 ABC transporter NW313_RS13475 PF16124 RecQ zinc-binding NW313_RS13475 PF00270 DEAD/DEAH box helicase NW313_RS13475 PF00271 Helicase conserved C-terminal domain NW313_RS13475 PF00570 HRDC domain NW313_RS13475 PF09382 RQC domain NW313_RS13480 PF00892 EamA-like transporter family NW313_RS13490 PF12833 Helix-turn-helix domain NW313_RS13495 PF01810 LysE type translocator NW313_RS13500 PF13361 UvrD-like helicase C-terminal domain NW313_RS13500 PF00580 UvrD/REP helicase N-terminal domain NW313_RS13505 PF01432 Peptidase family M3 NW313_RS13510 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NW313_RS13515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NW313_RS13515 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS13555 PF01734 Patatin-like phospholipase NW313_RS13580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NW313_RS13590 PF12911 N-terminal TM domain of oligopeptide transport permease C NW313_RS13590 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS13595 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS13600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW313_RS13605 PF00005 ABC transporter NW313_RS13605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW313_RS13640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NW313_RS13645 PF00580 UvrD/REP helicase N-terminal domain NW313_RS13645 PF13361 UvrD-like helicase C-terminal domain NW313_RS13650 PF00440 Bacterial regulatory proteins, tetR family NW313_RS13655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW313_RS13660 PF00873 AcrB/AcrD/AcrF family NW313_RS13665 PF04380 Membrane fusogenic activity NW313_RS13670 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NW313_RS13670 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NW313_RS13675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS13675 PF03466 LysR substrate binding domain NW313_RS13720 PF12724 Flavodoxin domain NW313_RS13725 PF02386 Cation transport protein NW313_RS13730 PF09186 Domain of unknown function (DUF1949) NW313_RS13730 PF01205 Uncharacterized protein family UPF0029 NW313_RS13735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NW313_RS13735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NW313_RS13735 PF00378 Enoyl-CoA hydratase/isomerase NW313_RS13740 PF02803 Thiolase, C-terminal domain NW313_RS13740 PF00108 Thiolase, N-terminal domain NW313_RS13745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS13745 PF03466 LysR substrate binding domain NW313_RS13750 PF07690 Major Facilitator Superfamily NW313_RS13755 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS13755 PF12804 MobA-like NTP transferase domain NW313_RS13760 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NW313_RS13760 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NW313_RS13765 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW313_RS13765 PF02874 ATP synthase alpha/beta family, beta-barrel domain NW313_RS13770 PF00231 ATP synthase NW313_RS13775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW313_RS13775 PF00306 ATP synthase alpha/beta chain, C terminal domain NW313_RS13775 PF02874 ATP synthase alpha/beta family, beta-barrel domain NW313_RS13780 PF00213 ATP synthase delta (OSCP) subunit NW313_RS13785 PF00430 ATP synthase B/B' CF(0) NW313_RS13790 PF00137 ATP synthase subunit C NW313_RS13795 PF00119 ATP synthase A chain NW313_RS13800 PF03899 ATP synthase I chain NW313_RS13805 PF02195 ParB-like nuclease domain NW313_RS13805 PF17762 HTH domain found in ParB protein NW313_RS13810 PF13614 AAA domain NW313_RS13815 PF02527 rRNA small subunit methyltransferase G NW313_RS13820 PF01134 Glucose inhibited division protein A NW313_RS13820 PF13932 GidA associated domain NW313_RS13825 PF00258 Flavodoxin NW313_RS13830 PF10396 GTP-binding protein TrmE N-terminus NW313_RS13830 PF01926 50S ribosome-binding GTPase NW313_RS13830 PF12631 MnmE helical domain NW313_RS13835 PF02096 60Kd inner membrane protein NW313_RS13835 PF14849 YidC periplasmic domain NW313_RS13840 PF01809 Putative membrane protein insertion efficiency factor NW313_RS13845 PF00825 Ribonuclease P NW313_RS13850 PF00468 Ribosomal protein L34 NW313_RS13855 PF00005 ABC transporter NW313_RS13860 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS13865 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW313_RS13870 PF13188 PAS domain NW313_RS13870 PF00072 Response regulator receiver domain NW313_RS13870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS13870 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS13870 PF08448 PAS fold NW313_RS13895 PF00005 ABC transporter NW313_RS13895 PF03459 TOBE domain NW313_RS13900 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS13910 PF07685 CobB/CobQ-like glutamine amidotransferase domain NW313_RS13910 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NW313_RS13950 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS13950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS13950 PF09308 LuxQ, periplasmic NW313_RS13950 PF00072 Response regulator receiver domain NW313_RS13955 PF13407 Periplasmic binding protein domain NW313_RS13965 PF01541 GIY-YIG catalytic domain NW313_RS13970 PF04337 Protein of unknown function, DUF480 NW313_RS13980 PF04363 Protein of unknown function (DUF496) NW313_RS13990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NW313_RS13990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NW313_RS13995 PF00230 Major intrinsic protein NW313_RS14000 PF04324 BFD-like [2Fe-2S] binding domain NW313_RS14000 PF01266 FAD dependent oxidoreductase NW313_RS14005 PF00890 FAD binding domain NW313_RS14010 PF13183 4Fe-4S dicluster domain NW313_RS14010 PF02754 Cysteine-rich domain NW313_RS14015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NW313_RS14015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NW313_RS14020 PF00085 Thioredoxin NW313_RS14025 PF07690 Major Facilitator Superfamily NW313_RS14050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS14050 PF03466 LysR substrate binding domain NW313_RS14055 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS14060 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS14065 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW313_RS14070 PF00005 ABC transporter NW313_RS14080 PF05762 VWA domain containing CoxE-like protein NW313_RS14085 PF17868 AAA lid domain NW313_RS14085 PF12592 Protein of unknown function (DUF3763) NW313_RS14085 PF07728 AAA domain (dynein-related subfamily) NW313_RS14090 PF00293 NUDIX domain NW313_RS14095 PF01212 Beta-eliminating lyase NW313_RS14100 PF00034 Cytochrome c NW313_RS14105 PF08361 MAATS-type transcriptional repressor, C-terminal region NW313_RS14105 PF00440 Bacterial regulatory proteins, tetR family NW313_RS14110 PF00270 DEAD/DEAH box helicase NW313_RS14110 PF00271 Helicase conserved C-terminal domain NW313_RS14115 PF04336 Acyl carrier protein phosphodiesterase NW313_RS14120 PF03222 Tryptophan/tyrosine permease family NW313_RS14125 PF00672 HAMP domain NW313_RS14125 PF12729 Four helix bundle sensory module for signal transduction NW313_RS14125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS14130 PF16363 GDP-mannose 4,6 dehydratase NW313_RS14135 PF03746 LamB/YcsF family NW313_RS14145 PF02626 Carboxyltransferase domain, subdomain A and B NW313_RS14155 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NW313_RS14155 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NW313_RS14165 PF00005 ABC transporter NW313_RS14170 PF13472 GDSL-like Lipase/Acylhydrolase family NW313_RS14175 PF07055 Enoyl reductase FAD binding domain NW313_RS14175 PF12241 Trans-2-enoyl-CoA reductase catalytic region NW313_RS14175 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NW313_RS14180 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS14180 PF00563 EAL domain NW313_RS14180 PF00498 FHA domain NW313_RS14190 PF00226 DnaJ domain NW313_RS14190 PF01556 DnaJ C terminal domain NW313_RS14190 PF00684 DnaJ central domain NW313_RS14220 PF02796 Helix-turn-helix domain of resolvase NW313_RS14220 PF00239 Resolvase, N terminal domain NW313_RS14230 PF13419 Haloacid dehalogenase-like hydrolase NW313_RS14245 PF00294 pfkB family carbohydrate kinase NW313_RS14250 PF00884 Sulfatase NW313_RS14260 PF03880 DbpA RNA binding domain NW313_RS14260 PF00270 DEAD/DEAH box helicase NW313_RS14260 PF00271 Helicase conserved C-terminal domain NW313_RS14265 PF08206 Ribonuclease B OB domain NW313_RS14265 PF00773 RNB domain NW313_RS14265 PF00575 S1 RNA binding domain NW313_RS14275 PF12849 PBP superfamily domain NW313_RS14280 PF01575 MaoC like domain NW313_RS14285 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NW313_RS14290 PF18416 N-acetylglucosamine binding protein domain 2 NW313_RS14290 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NW313_RS14295 PF04151 Bacterial pre-peptidase C-terminal domain NW313_RS14295 PF07504 Fungalysin/Thermolysin Propeptide Motif NW313_RS14295 PF03413 Peptidase propeptide and YPEB domain NW313_RS14295 PF02868 Thermolysin metallopeptidase, alpha-helical domain NW313_RS14295 PF01447 Thermolysin metallopeptidase, catalytic domain NW313_RS14300 PF04389 Peptidase family M28 NW313_RS14300 PF04151 Bacterial pre-peptidase C-terminal domain NW313_RS14305 PF00491 Arginase family NW313_RS14310 PF17810 Arginine decarboxylase helical bundle domain NW313_RS14310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NW313_RS14310 PF17944 Arginine decarboxylase C-terminal helical extension NW313_RS14320 PF00571 CBS domain NW313_RS14320 PF01769 Divalent cation transporter NW313_RS14320 PF03448 MgtE intracellular N domain NW313_RS14325 PF00166 Chaperonin 10 Kd subunit NW313_RS14330 PF00118 TCP-1/cpn60 chaperonin family NW313_RS14340 PF00696 Amino acid kinase family NW313_RS14340 PF13840 ACT domain NW313_RS14345 PF06339 Ectoine synthase NW313_RS14350 PF00202 Aminotransferase class-III NW313_RS14355 PF00583 Acetyltransferase (GNAT) family NW313_RS14360 PF01329 Pterin 4 alpha carbinolamine dehydratase NW313_RS14365 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NW313_RS14370 PF00501 AMP-binding enzyme NW313_RS14370 PF13193 AMP-binding enzyme C-terminal domain NW313_RS14390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS14390 PF03466 LysR substrate binding domain NW313_RS14400 PF00892 EamA-like transporter family NW313_RS14405 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal NW313_RS14405 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS14405 PF14602 Hexapeptide repeat of succinyl-transferase NW313_RS14410 PF00571 CBS domain NW313_RS14410 PF03471 Transporter associated domain NW313_RS14410 PF01595 Cyclin M transmembrane N-terminal domain NW313_RS14415 PF02566 OsmC-like protein NW313_RS14420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NW313_RS14425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NW313_RS14425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NW313_RS14440 PF13520 Amino acid permease NW313_RS14445 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS14455 PF04397 LytTr DNA-binding domain NW313_RS14455 PF00072 Response regulator receiver domain NW313_RS14460 PF13492 GAF domain NW313_RS14460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS14460 PF06580 Histidine kinase NW313_RS14460 PF07694 5TMR of 5TMR-LYT NW313_RS14475 PF02687 FtsX-like permease family NW313_RS14475 PF12704 MacB-like periplasmic core domain NW313_RS14475 PF00005 ABC transporter NW313_RS14480 PF00005 ABC transporter NW313_RS14495 PF00248 Aldo/keto reductase family NW313_RS14500 PF00128 Alpha amylase, catalytic domain NW313_RS14510 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NW313_RS14515 PF12262 Bacterial virulence factor lipase N-terminal NW313_RS14520 PF13426 PAS domain NW313_RS14520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS14520 PF08447 PAS fold NW313_RS14525 PF03413 Peptidase propeptide and YPEB domain NW313_RS14525 PF01447 Thermolysin metallopeptidase, catalytic domain NW313_RS14525 PF04151 Bacterial pre-peptidase C-terminal domain NW313_RS14525 PF02868 Thermolysin metallopeptidase, alpha-helical domain NW313_RS14525 PF07504 Fungalysin/Thermolysin Propeptide Motif NW313_RS14535 PF03922 OmpW family NW313_RS14545 PF00768 D-alanyl-D-alanine carboxypeptidase NW313_RS14550 PF00392 Bacterial regulatory proteins, gntR family NW313_RS14550 PF00155 Aminotransferase class I and II NW313_RS14555 PF01654 Cytochrome bd terminal oxidase subunit I NW313_RS14560 PF02322 Cytochrome bd terminal oxidase subunit II NW313_RS14575 PF00291 Pyridoxal-phosphate dependent enzyme NW313_RS14580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS14580 PF03466 LysR substrate binding domain NW313_RS14635 PF08240 Alcohol dehydrogenase GroES-like domain NW313_RS14635 PF00107 Zinc-binding dehydrogenase NW313_RS14640 PF00155 Aminotransferase class I and II NW313_RS14645 PF01965 DJ-1/PfpI family NW313_RS14660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS14660 PF03466 LysR substrate binding domain NW313_RS14665 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW313_RS14690 PF01966 HD domain NW313_RS14695 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NW313_RS14695 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NW313_RS14700 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NW313_RS14705 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NW313_RS14705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NW313_RS14730 PF02595 Glycerate kinase family NW313_RS14735 PF02447 GntP family permease NW313_RS14740 PF17853 GGDEF-like domain NW313_RS14740 PF13556 PucR C-terminal helix-turn-helix domain NW313_RS14740 PF05651 Putative sugar diacid recognition NW313_RS14745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS14745 PF00672 HAMP domain NW313_RS14750 PF01243 Pyridoxamine 5'-phosphate oxidase NW313_RS14755 PF06228 Haem utilisation ChuX/HutX NW313_RS14760 PF04055 Radical SAM superfamily NW313_RS14765 PF03544 Gram-negative bacterial TonB protein C-terminal NW313_RS14770 PF01618 MotA/TolQ/ExbB proton channel family NW313_RS14775 PF02472 Biopolymer transport protein ExbD/TolR NW313_RS14780 PF01497 Periplasmic binding protein NW313_RS14785 PF01032 FecCD transport family NW313_RS14790 PF00005 ABC transporter NW313_RS14820 PF00672 HAMP domain NW313_RS14820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS14820 PF02743 Cache domain NW313_RS14825 PF00111 2Fe-2S iron-sulfur cluster binding domain NW313_RS14825 PF03473 MOSC domain NW313_RS14825 PF03476 MOSC N-terminal beta barrel domain NW313_RS14825 PF03476 MOSC N-terminal beta barrel domain NW313_RS14825 PF00111 2Fe-2S iron-sulfur cluster binding domain NW313_RS14825 PF03473 MOSC domain NW313_RS14830 PF01979 Amidohydrolase family NW313_RS14840 PF05656 Protein of unknown function (DUF805) NW313_RS14850 PF05958 tRNA (Uracil-5-)-methyltransferase NW313_RS14855 PF05661 Protein of unknown function (DUF808) NW313_RS14865 PF00313 'Cold-shock' DNA-binding domain NW313_RS14890 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS14890 PF08448 PAS fold NW313_RS14895 PF08220 DeoR-like helix-turn-helix domain NW313_RS14895 PF00455 DeoR C terminal sensor domain NW313_RS14910 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS14915 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS14915 PF14785 Maltose transport system permease protein MalF P2 domain NW313_RS14920 PF01547 Bacterial extracellular solute-binding protein NW313_RS14925 PF08402 TOBE domain NW313_RS14925 PF00005 ABC transporter NW313_RS14930 PF13302 Acetyltransferase (GNAT) domain NW313_RS14945 PF01906 Putative heavy-metal-binding NW313_RS14950 PF00196 Bacterial regulatory proteins, luxR family NW313_RS14960 PF00072 Response regulator receiver domain NW313_RS14960 PF01584 CheW-like domain NW313_RS14965 PF01047 MarR family NW313_RS14970 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS14985 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS14985 PF00563 EAL domain NW313_RS14985 PF03707 Bacterial signalling protein N terminal repeat NW313_RS15005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS15005 PF03466 LysR substrate binding domain NW313_RS15010 PF00563 EAL domain NW313_RS15010 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS15020 PF02678 Pirin NW313_RS15020 PF05726 Pirin C-terminal cupin domain NW313_RS15025 PF06865 Pyrimidine/purine nucleoside phosphorylase NW313_RS15035 PF07690 Major Facilitator Superfamily NW313_RS15040 PF17200 Single Cache domain 2 NW313_RS15040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15040 PF00672 HAMP domain NW313_RS15045 PF13654 AAA domain NW313_RS15045 PF05362 Lon protease (S16) C-terminal proteolytic domain NW313_RS15055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW313_RS15055 PF00005 ABC transporter NW313_RS15060 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW313_RS15065 PF13426 PAS domain NW313_RS15065 PF08447 PAS fold NW313_RS15065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15080 PF03466 LysR substrate binding domain NW313_RS15080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS15090 PF02652 L-lactate permease NW313_RS15095 PF01070 FMN-dependent dehydrogenase NW313_RS15105 PF03618 Kinase/pyrophosphorylase NW313_RS15110 PF00391 PEP-utilising enzyme, mobile domain NW313_RS15110 PF02896 PEP-utilising enzyme, TIM barrel domain NW313_RS15110 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NW313_RS15115 PF08447 PAS fold NW313_RS15115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15120 PF01554 MatE NW313_RS15125 PF00270 DEAD/DEAH box helicase NW313_RS15125 PF00271 Helicase conserved C-terminal domain NW313_RS15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS15130 PF03466 LysR substrate binding domain NW313_RS15140 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NW313_RS15150 PF00005 ABC transporter NW313_RS15150 PF00664 ABC transporter transmembrane region NW313_RS15160 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NW313_RS15170 PF01810 LysE type translocator NW313_RS15175 PF12833 Helix-turn-helix domain NW313_RS15190 PF01557 Fumarylacetoacetate (FAA) hydrolase family NW313_RS15195 PF01047 MarR family NW313_RS15200 PF02566 OsmC-like protein NW313_RS15205 PF13609 Gram-negative porin NW313_RS15210 PF00892 EamA-like transporter family NW313_RS15215 PF00462 Glutaredoxin NW313_RS15220 PF07670 Nucleoside recognition NW313_RS15225 PF07670 Nucleoside recognition NW313_RS15230 PF03600 Citrate transporter NW313_RS15240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NW313_RS15240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NW313_RS15245 PF06029 AlkA N-terminal domain NW313_RS15245 PF00730 HhH-GPD superfamily base excision DNA repair protein NW313_RS15250 PF07681 DoxX NW313_RS15255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS15255 PF03466 LysR substrate binding domain NW313_RS15275 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NW313_RS15285 PF07148 Maltose operon periplasmic protein precursor (MalM) NW313_RS15290 PF02264 LamB porin NW313_RS15295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NW313_RS15295 PF00128 Alpha amylase, catalytic domain NW313_RS15305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15305 PF16591 Helical bimodular sensor domain NW313_RS15305 PF00672 HAMP domain NW313_RS15320 PF00672 HAMP domain NW313_RS15320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15330 PF00793 DAHP synthetase I family NW313_RS15335 PF00005 ABC transporter NW313_RS15340 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS15345 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW313_RS15350 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS15355 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NW313_RS15355 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NW313_RS15355 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NW313_RS15355 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NW313_RS15365 PF04225 Opacity-associated protein A LysM-like domain NW313_RS15365 PF01551 Peptidase family M23 NW313_RS15370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NW313_RS15370 PF02378 Phosphotransferase system, EIIC NW313_RS15370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NW313_RS15375 PF08125 Mannitol dehydrogenase C-terminal domain NW313_RS15375 PF01232 Mannitol dehydrogenase Rossmann domain NW313_RS15380 PF05068 Mannitol repressor NW313_RS15385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW313_RS15415 PF13460 NAD(P)H-binding NW313_RS15420 PF03466 LysR substrate binding domain NW313_RS15420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS15425 PF00672 HAMP domain NW313_RS15425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15425 PF02743 Cache domain NW313_RS15430 PF00106 short chain dehydrogenase NW313_RS15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS15435 PF03466 LysR substrate binding domain NW313_RS15440 PF04013 Putative SAM-dependent RNA methyltransferase NW313_RS15445 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NW313_RS15455 PF13520 Amino acid permease NW313_RS15460 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NW313_RS15460 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NW313_RS15460 PF01276 Orn/Lys/Arg decarboxylase, major domain NW313_RS15465 PF10940 Protein of unknown function (DUF2618) NW313_RS15470 PF00171 Aldehyde dehydrogenase family NW313_RS15475 PF01037 Lrp/AsnC ligand binding domain NW313_RS15480 PF02743 Cache domain NW313_RS15480 PF00672 HAMP domain NW313_RS15480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15490 PF00474 Sodium:solute symporter family NW313_RS15500 PF14850 DNA-binding domain of Proline dehydrogenase NW313_RS15500 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NW313_RS15500 PF01619 Proline dehydrogenase NW313_RS15500 PF00171 Aldehyde dehydrogenase family NW313_RS15505 PF12833 Helix-turn-helix domain NW313_RS15515 PF03781 Sulfatase-modifying factor enzyme 1 NW313_RS15520 PF00196 Bacterial regulatory proteins, luxR family NW313_RS15520 PF00072 Response regulator receiver domain NW313_RS15525 PF01243 Pyridoxamine 5'-phosphate oxidase NW313_RS15525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NW313_RS15530 PF00529 HlyD membrane-fusion protein of T1SS NW313_RS15545 PF00005 ABC transporter NW313_RS15545 PF03412 Peptidase C39 family NW313_RS15545 PF00664 ABC transporter transmembrane region NW313_RS15555 PF00486 Transcriptional regulatory protein, C terminal NW313_RS15555 PF00072 Response regulator receiver domain NW313_RS15565 PF00672 HAMP domain NW313_RS15565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15565 PF02743 Cache domain NW313_RS15570 PF00072 Response regulator receiver domain NW313_RS15570 PF01339 CheB methylesterase NW313_RS15575 PF03975 CheD chemotactic sensory transduction NW313_RS15580 PF01739 CheR methyltransferase, SAM binding domain NW313_RS15580 PF03705 CheR methyltransferase, all-alpha domain NW313_RS15590 PF01584 CheW-like domain NW313_RS15595 PF01584 CheW-like domain NW313_RS15600 PF02895 Signal transducing histidine kinase, homodimeric domain NW313_RS15600 PF09078 CheY binding NW313_RS15600 PF01584 CheW-like domain NW313_RS15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS15600 PF01627 Hpt domain NW313_RS15605 PF01627 Hpt domain NW313_RS15605 PF01584 CheW-like domain NW313_RS15605 PF09078 CheY binding NW313_RS15605 PF02895 Signal transducing histidine kinase, homodimeric domain NW313_RS15605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS15610 PF00072 Response regulator receiver domain NW313_RS15625 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS15630 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS15630 PF12911 N-terminal TM domain of oligopeptide transport permease C NW313_RS15635 PF00005 ABC transporter NW313_RS15635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW313_RS15640 PF08019 Phosphoethanolamine transferase EptA/EptB NW313_RS15640 PF00884 Sulfatase NW313_RS15645 PF08521 Two-component sensor kinase N-terminal NW313_RS15645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS15645 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS15650 PF00486 Transcriptional regulatory protein, C terminal NW313_RS15650 PF00072 Response regulator receiver domain NW313_RS15670 PF00501 AMP-binding enzyme NW313_RS15680 PF05127 Helicase NW313_RS15680 PF13718 GNAT acetyltransferase 2 NW313_RS15685 PF13416 Bacterial extracellular solute-binding protein NW313_RS15690 PF08775 ParB family NW313_RS15690 PF02195 ParB-like nuclease domain NW313_RS15695 PF13614 AAA domain NW313_RS15695 PF18607 ParA helix turn helix domain NW313_RS15720 PF01709 Transcriptional regulator NW313_RS15725 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NW313_RS15725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NW313_RS15730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15730 PF17200 Single Cache domain 2 NW313_RS15730 PF00672 HAMP domain NW313_RS15735 PF10928 Protein of unknown function (DUF2810) NW313_RS15740 PF00196 Bacterial regulatory proteins, luxR family NW313_RS15740 PF17874 MalT-like TPR region NW313_RS15745 PF00343 Carbohydrate phosphorylase NW313_RS15750 PF02446 4-alpha-glucanotransferase NW313_RS15755 PF00128 Alpha amylase, catalytic domain NW313_RS15755 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NW313_RS15755 PF02806 Alpha amylase, C-terminal all-beta domain NW313_RS15760 PF05638 Type VI secretion system effector, Hcp NW313_RS15765 PF04717 Type VI secretion system, phage-baseplate injector NW313_RS15770 PF13503 Domain of unknown function (DUF4123) NW313_RS15790 PF01757 Acyltransferase family NW313_RS15790 PF01168 Alanine racemase, N-terminal domain NW313_RS15790 PF00842 Alanine racemase, C-terminal domain NW313_RS15800 PF00939 Sodium:sulfate symporter transmembrane region NW313_RS15805 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) NW313_RS15810 PF00704 Glycosyl hydrolases family 18 NW313_RS15810 PF08329 Chitinase A, N-terminal domain NW313_RS15825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15825 PF00672 HAMP domain NW313_RS15825 PF02743 Cache domain NW313_RS15845 PF01569 PAP2 superfamily NW313_RS15850 PF00375 Sodium:dicarboxylate symporter family NW313_RS15860 PF02630 SCO1/SenC NW313_RS15875 PF03616 Sodium/glutamate symporter NW313_RS15880 PF07238 PilZ domain NW313_RS15880 PF12945 Flagellar protein YcgR NW313_RS15895 PF00529 HlyD membrane-fusion protein of T1SS NW313_RS15895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW313_RS15900 PF11742 Protein of unknown function (DUF3302) NW313_RS15905 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS15920 PF01048 Phosphorylase superfamily NW313_RS15925 PF08349 Protein of unknown function (DUF1722) NW313_RS15930 PF13411 MerR HTH family regulatory protein NW313_RS15935 PF03441 FAD binding domain of DNA photolyase NW313_RS15935 PF00875 DNA photolyase NW313_RS15940 PF17969 L,D-transpeptidase C-terminal domain NW313_RS15940 PF01476 LysM domain NW313_RS15940 PF03734 L,D-transpeptidase catalytic domain NW313_RS15950 PF00270 DEAD/DEAH box helicase NW313_RS15950 PF00271 Helicase conserved C-terminal domain NW313_RS15955 PF00326 Prolyl oligopeptidase family NW313_RS15955 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NW313_RS15960 PF07715 TonB-dependent Receptor Plug Domain NW313_RS15960 PF00593 TonB dependent receptor NW313_RS15980 PF12729 Four helix bundle sensory module for signal transduction NW313_RS15980 PF00672 HAMP domain NW313_RS15980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS15985 PF12849 PBP superfamily domain NW313_RS15990 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS15995 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS16000 PF00005 ABC transporter NW313_RS16005 PF03707 Bacterial signalling protein N terminal repeat NW313_RS16005 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS16005 PF00563 EAL domain NW313_RS16020 PF07670 Nucleoside recognition NW313_RS16025 PF01740 STAS domain NW313_RS16025 PF00916 Sulfate permease family NW313_RS16035 PF01476 LysM domain NW313_RS16035 PF08525 Opacity-associated protein A N-terminal motif NW313_RS16035 PF01551 Peptidase family M23 NW313_RS16040 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS16040 PF13188 PAS domain NW313_RS16040 PF03707 Bacterial signalling protein N terminal repeat NW313_RS16040 PF00563 EAL domain NW313_RS16045 PF03466 LysR substrate binding domain NW313_RS16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS16050 PF07690 Major Facilitator Superfamily NW313_RS16055 PF00376 MerR family regulatory protein NW313_RS16055 PF09278 MerR, DNA binding NW313_RS16075 PF00375 Sodium:dicarboxylate symporter family NW313_RS16085 PF02001 Protein of unknown function DUF134 NW313_RS16105 PF07504 Fungalysin/Thermolysin Propeptide Motif NW313_RS16105 PF01483 Proprotein convertase P-domain NW313_RS16105 PF01447 Thermolysin metallopeptidase, catalytic domain NW313_RS16105 PF02868 Thermolysin metallopeptidase, alpha-helical domain NW313_RS16115 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NW313_RS16115 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NW313_RS16120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW313_RS16120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NW313_RS16125 PF00581 Rhodanese-like domain NW313_RS16130 PF00563 EAL domain NW313_RS16130 PF00196 Bacterial regulatory proteins, luxR family NW313_RS16135 PF13419 Haloacid dehalogenase-like hydrolase NW313_RS16140 PF01740 STAS domain NW313_RS16140 PF00916 Sulfate permease family NW313_RS16145 PF00849 RNA pseudouridylate synthase NW313_RS16165 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NW313_RS16175 PF05947 Type VI secretion system, TssF NW313_RS16195 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NW313_RS16205 PF00004 ATPase family associated with various cellular activities (AAA) NW313_RS16205 PF07724 AAA domain (Cdc48 subfamily) NW313_RS16205 PF17871 AAA lid domain NW313_RS16205 PF10431 C-terminal, D2-small domain, of ClpB protein NW313_RS16210 PF02954 Bacterial regulatory protein, Fis family NW313_RS16210 PF00158 Sigma-54 interaction domain NW313_RS16225 PF06761 Intracellular multiplication and human macrophage-killing NW313_RS16225 PF14331 ImcF-related N-terminal domain NW313_RS16225 PF06744 Type VI secretion protein IcmF C-terminal NW313_RS16235 PF01471 Putative peptidoglycan binding domain NW313_RS16235 PF04717 Type VI secretion system, phage-baseplate injector NW313_RS16250 PF05025 RbsD / FucU transport protein family NW313_RS16255 PF00005 ABC transporter NW313_RS16260 PF02653 Branched-chain amino acid transport system / permease component NW313_RS16265 PF13407 Periplasmic binding protein domain NW313_RS16270 PF00294 pfkB family carbohydrate kinase NW313_RS16275 PF00356 Bacterial regulatory proteins, lacI family NW313_RS16285 PF01048 Phosphorylase superfamily NW313_RS16295 PF03009 Glycerophosphoryl diester phosphodiesterase family NW313_RS16300 PF07690 Major Facilitator Superfamily NW313_RS16315 PF02743 Cache domain NW313_RS16315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS16315 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS16320 PF02954 Bacterial regulatory protein, Fis family NW313_RS16320 PF00072 Response regulator receiver domain NW313_RS16320 PF00158 Sigma-54 interaction domain NW313_RS16335 PF01266 FAD dependent oxidoreductase NW313_RS16340 PF00041 Fibronectin type III domain NW313_RS16340 PF12561 ToxR activated gene A lipoprotein domain NW313_RS16345 PF01327 Polypeptide deformylase NW313_RS16355 PF03334 Na+/H+ antiporter subunit NW313_RS16360 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NW313_RS16365 PF01899 Na+/H+ ion antiporter subunit NW313_RS16370 PF00361 Proton-conducting membrane transporter NW313_RS16375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NW313_RS16380 PF13244 Domain of unknown function (DUF4040) NW313_RS16380 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NW313_RS16380 PF00361 Proton-conducting membrane transporter NW313_RS16380 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NW313_RS16390 PF00582 Universal stress protein family NW313_RS16395 PF03222 Tryptophan/tyrosine permease family NW313_RS16400 PF01212 Beta-eliminating lyase NW313_RS16405 PF12843 Putative quorum-sensing-regulated virulence factor NW313_RS16415 PF00563 EAL domain NW313_RS16415 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS16415 PF08448 PAS fold NW313_RS16420 PF00313 'Cold-shock' DNA-binding domain NW313_RS16435 PF13519 von Willebrand factor type A domain NW313_RS16435 PF07584 Aerotolerance regulator N-terminal NW313_RS16450 PF01882 Protein of unknown function DUF58 NW313_RS16455 PF07726 ATPase family associated with various cellular activities (AAA) NW313_RS16455 PF17863 AAA lid domain NW313_RS16460 PF00672 HAMP domain NW313_RS16460 PF02743 Cache domain NW313_RS16460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS16475 PF07662 Na+ dependent nucleoside transporter C-terminus NW313_RS16475 PF07670 Nucleoside recognition NW313_RS16475 PF01773 Na+ dependent nucleoside transporter N-terminus NW313_RS16480 PF01546 Peptidase family M20/M25/M40 NW313_RS16480 PF07687 Peptidase dimerisation domain NW313_RS16490 PF01590 GAF domain NW313_RS16490 PF00158 Sigma-54 interaction domain NW313_RS16495 PF00970 Oxidoreductase FAD-binding domain NW313_RS16495 PF00042 Globin NW313_RS16495 PF00175 Oxidoreductase NAD-binding domain NW313_RS16500 PF00313 'Cold-shock' DNA-binding domain NW313_RS16505 PF03889 Alternative ribosome-rescue factor A NW313_RS16520 PF00072 Response regulator receiver domain NW313_RS16530 PF01256 Carbohydrate kinase NW313_RS16530 PF03853 YjeF-related protein N-terminus NW313_RS16535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NW313_RS16535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW313_RS16545 PF07885 Ion channel NW313_RS16555 PF00478 IMP dehydrogenase / GMP reductase domain NW313_RS16560 PF00145 C-5 cytosine-specific DNA methylase NW313_RS16580 PF00872 Transposase, Mutator family NW313_RS16585 PF01797 Transposase IS200 like NW313_RS16595 PF00271 Helicase conserved C-terminal domain NW313_RS16595 PF00270 DEAD/DEAH box helicase NW313_RS16600 PF03605 Anaerobic c4-dicarboxylate membrane transporter NW313_RS16605 PF02540 NAD synthase NW313_RS16610 PF01467 Cytidylyltransferase-like NW313_RS16615 PF11849 Domain of unknown function (DUF3369) NW313_RS16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS16620 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW313_RS16620 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS16630 PF03553 Na+/H+ antiporter family NW313_RS16635 PF07690 Major Facilitator Superfamily NW313_RS16645 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS16645 PF08448 PAS fold NW313_RS16650 PF00657 GDSL-like Lipase/Acylhydrolase NW313_RS16655 PF07968 Leukocidin/Hemolysin toxin family NW313_RS16655 PF16458 Beta-prism lectin NW313_RS16655 PF12563 Hemolytic toxin N terminal NW313_RS16660 PF00672 HAMP domain NW313_RS16660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS16660 PF12729 Four helix bundle sensory module for signal transduction NW313_RS16665 PF00561 alpha/beta hydrolase fold NW313_RS16670 PF03280 Proteobacterial lipase chaperone protein NW313_RS16675 PF05547 Immune inhibitor A peptidase M6 NW313_RS16675 PF00801 PKD domain NW313_RS16695 PF01032 FecCD transport family NW313_RS16700 PF01032 FecCD transport family NW313_RS16705 PF00005 ABC transporter NW313_RS16710 PF12833 Helix-turn-helix domain NW313_RS16715 PF07715 TonB-dependent Receptor Plug Domain NW313_RS16715 PF00593 TonB dependent receptor NW313_RS16725 PF00871 Acetokinase family NW313_RS16740 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS16740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS16740 PF00672 HAMP domain NW313_RS16745 PF00072 Response regulator receiver domain NW313_RS16745 PF00486 Transcriptional regulatory protein, C terminal NW313_RS16755 PF01261 Xylose isomerase-like TIM barrel NW313_RS16760 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NW313_RS16770 PF00596 Class II Aldolase and Adducin N-terminal domain NW313_RS16775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NW313_RS16780 PF03611 PTS system sugar-specific permease component NW313_RS16785 PF08220 DeoR-like helix-turn-helix domain NW313_RS16785 PF00455 DeoR C terminal sensor domain NW313_RS16795 PF01292 Prokaryotic cytochrome b561 NW313_RS16800 PF00128 Alpha amylase, catalytic domain NW313_RS16805 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS16825 PF00486 Transcriptional regulatory protein, C terminal NW313_RS16825 PF00072 Response regulator receiver domain NW313_RS16830 PF14827 Double sensory domain of two-component sensor kinase NW313_RS16830 PF00672 HAMP domain NW313_RS16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS16830 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS16830 PF13426 PAS domain NW313_RS16870 PF07690 Major Facilitator Superfamily NW313_RS16875 PF02743 Cache domain NW313_RS16875 PF00672 HAMP domain NW313_RS16875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS16880 PF00282 Pyridoxal-dependent decarboxylase conserved domain NW313_RS16885 PF07943 Penicillin-binding protein 5, C-terminal domain NW313_RS16885 PF00768 D-alanyl-D-alanine carboxypeptidase NW313_RS16900 PF00194 Eukaryotic-type carbonic anhydrase NW313_RS16905 PF01797 Transposase IS200 like NW313_RS16910 PF02347 Glycine cleavage system P-protein NW313_RS16915 PF01597 Glycine cleavage H-protein NW313_RS16920 PF00464 Serine hydroxymethyltransferase NW313_RS16930 PF08669 Glycine cleavage T-protein C-terminal barrel domain NW313_RS16930 PF01571 Aminomethyltransferase folate-binding domain NW313_RS16940 PF01609 Transposase DDE domain NW313_RS16940 PF05598 Transposase domain (DUF772) NW313_RS16965 PF03129 Anticodon binding domain NW313_RS16965 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NW313_RS16965 PF02824 TGS domain NW313_RS16965 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NW313_RS16970 PF05198 Translation initiation factor IF-3, N-terminal domain NW313_RS16970 PF00707 Translation initiation factor IF-3, C-terminal domain NW313_RS16975 PF01632 Ribosomal protein L35 NW313_RS16980 PF00453 Ribosomal protein L20 NW313_RS16985 PF00589 Phage integrase family NW313_RS16985 PF13495 Phage integrase, N-terminal SAM-like domain NW313_RS17030 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS17075 PF01966 HD domain NW313_RS17075 PF13286 Phosphohydrolase-associated domain NW313_RS17100 PF00293 NUDIX domain NW313_RS17115 PF13302 Acetyltransferase (GNAT) domain NW313_RS17120 PF08212 Lipocalin-like domain NW313_RS17150 PF00872 Transposase, Mutator family NW313_RS17155 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ NW313_RS17185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW313_RS17270 PF17676 LD-carboxypeptidase C-terminal domain NW313_RS17270 PF02016 LD-carboxypeptidase N-terminal domain NW313_RS17280 PF04229 GrpB protein NW313_RS17295 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW313_RS17335 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW313_RS17350 PF08212 Lipocalin-like domain NW313_RS17370 PF04229 GrpB protein NW313_RS17380 PF01810 LysE type translocator NW313_RS17410 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH NW313_RS17565 PF04229 GrpB protein NW313_RS17595 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB NW313_RS17600 PF01381 Helix-turn-helix NW313_RS17625 PF17676 LD-carboxypeptidase C-terminal domain NW313_RS17625 PF02016 LD-carboxypeptidase N-terminal domain NW313_RS17650 PF08212 Lipocalin-like domain NW313_RS17655 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NW313_RS17665 PF01555 DNA methylase NW313_RS17710 PF01965 DJ-1/PfpI family NW313_RS17710 PF12833 Helix-turn-helix domain NW313_RS17755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW313_RS17790 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system NW313_RS17795 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA NW313_RS17810 PF01609 Transposase DDE domain NW313_RS17810 PF05598 Transposase domain (DUF772) NW313_RS17840 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW313_RS17850 PF05016 ParE toxin of type II toxin-antitoxin system, parDE NW313_RS17930 PF07859 alpha/beta hydrolase fold NW313_RS17945 PF01797 Transposase IS200 like NW313_RS18005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW313_RS18020 PF13597 Anaerobic ribonucleoside-triphosphate reductase NW313_RS18020 PF03477 ATP cone domain NW313_RS18030 PF00155 Aminotransferase class I and II NW313_RS18035 PF18030 RimK PreATP-grasp domain NW313_RS18035 PF08443 RimK-like ATP-grasp domain NW313_RS18040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NW313_RS18040 PF02378 Phosphotransferase system, EIIC NW313_RS18045 PF00294 pfkB family carbohydrate kinase NW313_RS18050 PF00381 PTS HPr component phosphorylation site NW313_RS18050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NW313_RS18055 PF00356 Bacterial regulatory proteins, lacI family NW313_RS18055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NW313_RS18060 PF12320 Type 5 capsule protein repressor C-terminal domain NW313_RS18060 PF00149 Calcineurin-like phosphoesterase NW313_RS18065 PF13476 AAA domain NW313_RS18070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS18070 PF00072 Response regulator receiver domain NW313_RS18075 PF00155 Aminotransferase class I and II NW313_RS18085 PF00654 Voltage gated chloride channel NW313_RS18090 PF07683 Cobalamin synthesis protein cobW C-terminal domain NW313_RS18090 PF02492 CobW/HypB/UreG, nucleotide-binding domain NW313_RS18095 PF01926 50S ribosome-binding GTPase NW313_RS18100 PF02705 K+ potassium transporter NW313_RS18105 PF10371 Domain of unknown function NW313_RS18105 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II NW313_RS18105 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase NW313_RS18105 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg NW313_RS18105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW313_RS18110 PF13493 Domain of unknown function (DUF4118) NW313_RS18110 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS18110 PF02702 Osmosensitive K+ channel His kinase sensor domain NW313_RS18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS18115 PF00072 Response regulator receiver domain NW313_RS18115 PF00486 Transcriptional regulatory protein, C terminal NW313_RS18120 PF02416 mttA/Hcf106 family NW313_RS18125 PF09335 SNARE associated Golgi protein NW313_RS18135 PF00563 EAL domain NW313_RS18135 PF10388 EAL-domain associated signalling protein domain NW313_RS18145 PF01292 Prokaryotic cytochrome b561 NW313_RS18150 PF04264 YceI-like domain NW313_RS18155 PF01226 Formate/nitrite transporter NW313_RS18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS18160 PF03466 LysR substrate binding domain NW313_RS18165 PF06496 Protein of unknown function (DUF1097) NW313_RS18170 PF11398 Protein of unknown function (DUF2813) NW313_RS18175 PF02872 5'-nucleotidase, C-terminal domain NW313_RS18175 PF00149 Calcineurin-like phosphoesterase NW313_RS18180 PF03741 Integral membrane protein TerC family NW313_RS18190 PF08274 PhnA Zinc-Ribbon NW313_RS18190 PF03831 PhnA domain NW313_RS18220 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS18220 PF08448 PAS fold NW313_RS18240 PF17158 Membrane-associated sensor, integral membrane domain NW313_RS18240 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS18255 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NW313_RS18255 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NW313_RS18255 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NW313_RS18260 PF02233 NAD(P) transhydrogenase beta subunit NW313_RS18270 PF00072 Response regulator receiver domain NW313_RS18270 PF00486 Transcriptional regulatory protein, C terminal NW313_RS18285 PF03701 Uncharacterised protein family (UPF0181) NW313_RS18290 PF01253 Translation initiation factor SUI1 NW313_RS18300 PF01820 D-ala D-ala ligase N-terminus NW313_RS18300 PF07478 D-ala D-ala ligase C-terminus NW313_RS18310 PF13607 Succinyl-CoA ligase like flavodoxin domain NW313_RS18310 PF13380 CoA binding domain NW313_RS18310 PF00583 Acetyltransferase (GNAT) family NW313_RS18315 PF03466 LysR substrate binding domain NW313_RS18315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS18320 PF00593 TonB dependent receptor NW313_RS18320 PF07715 TonB-dependent Receptor Plug Domain NW313_RS18325 PF12793 Sugar transport-related sRNA regulator N-term NW313_RS18325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW313_RS18335 PF03061 Thioesterase superfamily NW313_RS18355 PF00043 Glutathione S-transferase, C-terminal domain NW313_RS18355 PF02798 Glutathione S-transferase, N-terminal domain NW313_RS18370 PF00132 Bacterial transferase hexapeptide (six repeats) NW313_RS18370 PF12804 MobA-like NTP transferase domain NW313_RS18370 PF03479 Plants and Prokaryotes Conserved (PCC) domain NW313_RS18375 PF00005 ABC transporter NW313_RS18375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW313_RS18380 PF12911 N-terminal TM domain of oligopeptide transport permease C NW313_RS18380 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS18385 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS18390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW313_RS18415 PF00854 POT family NW313_RS18425 PF00392 Bacterial regulatory proteins, gntR family NW313_RS18425 PF07702 UTRA domain NW313_RS18430 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS18435 PF00005 ABC transporter NW313_RS18445 PF00266 Aminotransferase class-V NW313_RS18450 PF00202 Aminotransferase class-III NW313_RS18455 PF13419 Haloacid dehalogenase-like hydrolase NW313_RS18460 PF01272 Transcription elongation factor, GreA/GreB, C-term NW313_RS18460 PF14760 Rnk N-terminus NW313_RS18465 PF13419 Haloacid dehalogenase-like hydrolase NW313_RS18480 PF01741 Large-conductance mechanosensitive channel, MscL NW313_RS18485 PF01268 Formate--tetrahydrofolate ligase NW313_RS18490 PF01625 Peptide methionine sulfoxide reductase NW313_RS18490 PF01641 SelR domain NW313_RS18495 PF01227 GTP cyclohydrolase I NW313_RS18500 PF00994 Probable molybdopterin binding domain NW313_RS18500 PF03453 MoeA N-terminal region (domain I and II) NW313_RS18500 PF03454 MoeA C-terminal region (domain IV) NW313_RS18505 PF00899 ThiF family NW313_RS18515 PF00581 Rhodanese-like domain NW313_RS18520 PF04198 Putative sugar-binding domain NW313_RS18525 PF00923 Transaldolase/Fructose-6-phosphate aldolase NW313_RS18530 PF02780 Transketolase, C-terminal domain NW313_RS18530 PF00456 Transketolase, thiamine diphosphate binding domain NW313_RS18530 PF02779 Transketolase, pyrimidine binding domain NW313_RS18545 PF07517 SecA DEAD-like domain NW313_RS18545 PF01043 SecA preprotein cross-linking domain NW313_RS18545 PF07516 SecA Wing and Scaffold domain NW313_RS18545 PF02810 SEC-C motif NW313_RS18555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NW313_RS18555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW313_RS18570 PF06942 GlpM protein NW313_RS18580 PF03466 LysR substrate binding domain NW313_RS18580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW313_RS18585 PF03992 Antibiotic biosynthesis monooxygenase NW313_RS18595 PF00873 AcrB/AcrD/AcrF family NW313_RS18610 PF04143 Sulphur transport NW313_RS18625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NW313_RS18625 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW313_RS18670 PF02378 Phosphotransferase system, EIIC NW313_RS18670 PF00367 phosphotransferase system, EIIB NW313_RS18675 PF00356 Bacterial regulatory proteins, lacI family NW313_RS18680 PF00251 Glycosyl hydrolases family 32 N-terminal domain NW313_RS18680 PF08244 Glycosyl hydrolases family 32 C terminal NW313_RS18685 PF00294 pfkB family carbohydrate kinase NW313_RS18690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NW313_RS18690 PF01266 FAD dependent oxidoreductase NW313_RS18695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS18695 PF00672 HAMP domain NW313_RS18700 PF00691 OmpA family NW313_RS18700 PF13488 Glycine zipper NW313_RS18705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NW313_RS18705 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NW313_RS18710 PF13419 Haloacid dehalogenase-like hydrolase NW313_RS18715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW313_RS18715 PF00672 HAMP domain NW313_RS18715 PF12729 Four helix bundle sensory module for signal transduction NW313_RS18720 PF03606 C4-dicarboxylate anaerobic carrier NW313_RS18725 PF03315 Serine dehydratase beta chain NW313_RS18725 PF03313 Serine dehydratase alpha chain NW313_RS18730 PF00474 Sodium:solute symporter family NW313_RS18745 PF00356 Bacterial regulatory proteins, lacI family NW313_RS18750 PF00072 Response regulator receiver domain NW313_RS18750 PF00196 Bacterial regulatory proteins, luxR family NW313_RS18755 PF07730 Histidine kinase NW313_RS18755 PF00672 HAMP domain NW313_RS18755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS18755 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NW313_RS18760 PF12838 4Fe-4S dicluster domain NW313_RS18760 PF13187 4Fe-4S dicluster domain NW313_RS18770 PF01568 Molydopterin dinucleotide binding domain NW313_RS18770 PF00384 Molybdopterin oxidoreductase NW313_RS18770 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NW313_RS18775 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) NW313_RS18780 PF03264 NapC/NirT cytochrome c family, N-terminal region NW313_RS18790 PF01966 HD domain NW313_RS18795 PF00196 Bacterial regulatory proteins, luxR family NW313_RS18795 PF00072 Response regulator receiver domain NW313_RS18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS18800 PF05231 MASE1 NW313_RS18800 PF07730 Histidine kinase NW313_RS18805 PF07690 Major Facilitator Superfamily NW313_RS18815 PF00528 Binding-protein-dependent transport system inner membrane component NW313_RS18820 PF00005 ABC transporter NW313_RS18820 PF08402 TOBE domain NW313_RS18825 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NW313_RS18835 PF02803 Thiolase, C-terminal domain NW313_RS18835 PF00108 Thiolase, N-terminal domain NW313_RS18840 PF00106 short chain dehydrogenase NW313_RS18845 PF02355 Protein export membrane protein NW313_RS18845 PF07549 SecD/SecF GG Motif NW313_RS18850 PF02355 Protein export membrane protein NW313_RS18850 PF07549 SecD/SecF GG Motif NW313_RS18850 PF13721 SecD export protein N-terminal TM region NW313_RS18865 PF00990 Diguanylate cyclase, GGDEF domain NW313_RS18870 PF00483 Nucleotidyl transferase NW313_RS18875 PF06483 Chitinase C NW313_RS18875 PF00704 Glycosyl hydrolases family 18 NW313_RS18880 PF00465 Iron-containing alcohol dehydrogenase NW313_RS18890 PF02954 Bacterial regulatory protein, Fis family NW313_RS18890 PF00072 Response regulator receiver domain NW313_RS18890 PF14532 Sigma-54 interaction domain NW313_RS18895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS18895 PF02743 Cache domain NW313_RS18895 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS18905 PF07690 Major Facilitator Superfamily NW313_RS18910 PF02887 Pyruvate kinase, alpha/beta domain NW313_RS18910 PF00224 Pyruvate kinase, barrel domain NW313_RS18915 PF00672 HAMP domain NW313_RS18915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW313_RS18915 PF00512 His Kinase A (phospho-acceptor) domain NW313_RS18915 PF01627 Hpt domain NW313_RS18915 PF00072 Response regulator receiver domain NW313_RS18920 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NW313_RS18925 PF02142 MGS-like domain NW313_RS18930 PF00857 Isochorismatase family NW313_RS18935 PF01219 Prokaryotic diacylglycerol kinase NW313_RS18950 PF12462 DNA helicase IV / RNA helicase N terminal NW313_RS18950 PF00580 UvrD/REP helicase N-terminal domain NW313_RS18950 PF13361 UvrD-like helicase C-terminal domain NW313_RS18955 PF12805 FUSC-like inner membrane protein yccS