locus-tag class description N16961_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix N16961_RS00005 PF00308 Bacterial dnaA protein N16961_RS00005 PF11638 DnaA N-terminal domain N16961_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain N16961_RS00010 PF02767 DNA polymerase III beta subunit, central domain N16961_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain N16961_RS00015 PF02463 RecF/RecN/SMC N terminal domain N16961_RS00020 PF01751 Toprim domain N16961_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS00020 PF18053 DNA gyrase B subunit insert domain N16961_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus N16961_RS00020 PF00204 DNA gyrase B N16961_RS00035 PF00011 Hsp20/alpha crystallin family N16961_RS00040 PF00155 Aminotransferase class I and II N16961_RS00050 PF02092 Glycyl-tRNA synthetase beta subunit N16961_RS00050 PF05746 DALR anticodon binding domain N16961_RS00055 PF02091 Glycyl-tRNA synthetase alpha subunit N16961_RS00060 PF01169 Uncharacterized protein family UPF0016 N16961_RS00075 PF01206 Sulfurtransferase TusA N16961_RS00085 PF00107 Zinc-binding dehydrogenase N16961_RS00085 PF08240 Alcohol dehydrogenase GroES-like domain N16961_RS00090 PF00291 Pyridoxal-phosphate dependent enzyme N16961_RS00090 PF00585 C-terminal regulatory domain of Threonine dehydratase N16961_RS00095 PF00920 Dehydratase family N16961_RS00100 PF01063 Amino-transferase class IV N16961_RS00110 PF00205 Thiamine pyrophosphate enzyme, central domain N16961_RS00110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_RS00110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_RS00115 PF01078 Magnesium chelatase, subunit ChlI N16961_RS00115 PF13335 Magnesium chelatase, subunit ChlI C-terminal N16961_RS00120 PF01553 Acyltransferase N16961_RS00125 PF01323 DSBA-like thioredoxin domain N16961_RS00130 PF01636 Phosphotransferase enzyme family N16961_RS00135 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase N16961_RS00135 PF12801 4Fe-4S binding domain N16961_RS00135 PF13746 4Fe-4S dicluster domain N16961_RS00145 PF06288 Protein of unknown function (DUF1040) N16961_RS00155 PF07070 SpoOM protein N16961_RS00160 PF03006 Haemolysin-III related N16961_RS00170 PF02386 Cation transport protein N16961_RS00175 PF02254 TrkA-N domain N16961_RS00175 PF02080 TrkA-C domain N16961_RS00180 PF01189 16S rRNA methyltransferase RsmB/F N16961_RS00180 PF01029 NusB family N16961_RS00185 PF02911 Formyl transferase, C-terminal domain N16961_RS00185 PF00551 Formyl transferase N16961_RS00190 PF01327 Polypeptide deformylase N16961_RS00195 PF01476 LysM domain N16961_RS00200 PF02481 DNA recombination-mediator protein A N16961_RS00200 PF17782 DprA winged helix domain N16961_RS00205 PF04361 Protein of unknown function (DUF494) N16961_RS00210 PF01396 Topoisomerase DNA binding C4 zinc finger N16961_RS00215 PF02222 ATP-grasp domain N16961_RS00215 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain N16961_RS00220 PF00731 AIR carboxylase N16961_RS00225 PF01300 Telomere recombination N16961_RS00230 PF01218 Coproporphyrinogen III oxidase N16961_RS00235 PF08501 Shikimate dehydrogenase substrate binding domain N16961_RS00235 PF01488 Shikimate / quinate 5-dehydrogenase N16961_RS00235 PF18317 Shikimate 5'-dehydrogenase C-terminal domain N16961_RS00245 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS00285 PF02537 CrcB-like protein, Camphor Resistance (CrcB) N16961_RS00290 PF01964 Radical SAM ThiC family N16961_RS00290 PF13667 ThiC-associated domain N16961_RS00295 PF02581 Thiamine monophosphate synthase N16961_RS00300 PF00899 ThiF family N16961_RS00305 PF02597 ThiS family N16961_RS00310 PF05690 Thiazole biosynthesis protein ThiG N16961_RS00315 PF04055 Radical SAM superfamily N16961_RS00315 PF06968 Biotin and Thiamin Synthesis associated domain N16961_RS00320 PF01321 Creatinase/Prolidase N-terminal domain N16961_RS00320 PF00557 Metallopeptidase family M24 N16961_RS00320 PF01321 Creatinase/Prolidase N-terminal domain N16961_RS00320 PF00557 Metallopeptidase family M24 N16961_RS00325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS00325 PF03466 LysR substrate binding domain N16961_RS00330 PF07690 Major Facilitator Superfamily N16961_RS00340 PF01037 Lrp/AsnC ligand binding domain N16961_RS00345 PF00563 EAL domain N16961_RS00345 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS00345 PF08448 PAS fold N16961_RS00350 PF04445 Putative SAM-dependent methyltransferase N16961_RS00360 PF00892 EamA-like transporter family N16961_RS00365 PF00582 Universal stress protein family N16961_RS00375 PF00210 Ferritin-like domain N16961_RS00380 PF10625 Universal stress protein B (UspB) N16961_RS00395 PF02646 RmuC family N16961_RS00400 PF01209 ubiE/COQ5 methyltransferase family N16961_RS00405 PF02036 SCP-2 sterol transfer family N16961_RS00410 PF03109 ABC1 family N16961_RS00415 PF02416 mttA/Hcf106 family N16961_RS00420 PF02416 mttA/Hcf106 family N16961_RS00425 PF00902 Sec-independent protein translocase protein (TatC) N16961_RS00430 PF03150 Di-haem cytochrome c peroxidase N16961_RS00430 PF00034 Cytochrome c N16961_RS00435 PF01554 MatE N16961_RS00445 PF01726 LexA DNA binding domain N16961_RS00445 PF00717 Peptidase S24-like N16961_RS00455 PF01553 Acyltransferase N16961_RS00460 PF01040 UbiA prenyltransferase family N16961_RS00465 PF04345 Chorismate lyase N16961_RS00475 PF03748 Flagellar basal body-associated protein FliL N16961_RS00480 PF02203 Tar ligand binding domain homologue N16961_RS00480 PF00672 HAMP domain N16961_RS00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS00485 PF01694 Rhomboid family N16961_RS00485 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease N16961_RS00490 PF00581 Rhodanese-like domain N16961_RS00500 PF01026 TatD related DNase N16961_RS00505 PF00490 Delta-aminolevulinic acid dehydratase N16961_RS00515 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N16961_RS00515 PF01612 3'-5' exonuclease N16961_RS00515 PF01367 5'-3' exonuclease, C-terminal SAM fold N16961_RS00515 PF00476 DNA polymerase family A N16961_RS00520 PF01926 50S ribosome-binding GTPase N16961_RS00525 PF00034 Cytochrome c N16961_RS00535 PF04220 Der GTPase activator (YihI) N16961_RS00540 PF10675 Protein of unknown function (DUF2489) N16961_RS00545 PF04055 Radical SAM superfamily N16961_RS00545 PF06969 HemN C-terminal domain N16961_RS00550 PF07219 HemY protein N-terminus N16961_RS00555 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase N16961_RS00560 PF02602 Uroporphyrinogen-III synthase HemD N16961_RS00565 PF03900 Porphobilinogen deaminase, C-terminal domain N16961_RS00565 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain N16961_RS00575 PF12633 Adenylate cyclase NT domain N16961_RS00575 PF01295 Adenylate cyclase, class-I N16961_RS00580 PF01491 Frataxin-like domain N16961_RS00590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N16961_RS00590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain N16961_RS00595 PF01678 Diaminopimelate epimerase N16961_RS00600 PF04340 Protein of unknown function, DUF484 N16961_RS00605 PF02899 Phage integrase, N-terminal SAM-like domain N16961_RS00605 PF00589 Phage integrase family N16961_RS00610 PF13419 Haloacid dehalogenase-like hydrolase N16961_RS00615 PF00563 EAL domain N16961_RS00615 PF10442 FIST C domain N16961_RS00615 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS00615 PF08495 FIST N domain N16961_RS00640 PF12146 Serine aminopeptidase, S33 N16961_RS00645 PF01810 LysE type translocator N16961_RS00650 PF08668 HDOD domain N16961_RS00650 PF00563 EAL domain N16961_RS00655 PF00210 Ferritin-like domain N16961_RS00700 PF02881 SRP54-type protein, helical bundle domain N16961_RS00700 PF00448 SRP54-type protein, GTPase domain N16961_RS00705 PF00005 ABC transporter N16961_RS00710 PF18075 FtsX extracellular domain N16961_RS00715 PF04545 Sigma-70, region 4 N16961_RS00715 PF00140 Sigma-70 factor, region 1.2 N16961_RS00715 PF04542 Sigma-70 region 2 N16961_RS00720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_RS00720 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS00730 PF00440 Bacterial regulatory proteins, tetR family N16961_RS00740 PF05958 tRNA (Uracil-5-)-methyltransferase N16961_RS00745 PF00593 TonB dependent receptor N16961_RS00745 PF07715 TonB-dependent Receptor Plug Domain N16961_RS00750 PF05922 Peptidase inhibitor I9 N16961_RS00750 PF00082 Subtilase family N16961_RS00750 PF04151 Bacterial pre-peptidase C-terminal domain N16961_RS00755 PF01177 Asp/Glu/Hydantoin racemase N16961_RS00825 PF00962 Adenosine/AMP deaminase N16961_RS00830 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS00830 PF03707 Bacterial signalling protein N terminal repeat N16961_RS00830 PF13188 PAS domain N16961_RS00830 PF00563 EAL domain N16961_RS00835 PF00072 Response regulator receiver domain N16961_RS00835 PF00158 Sigma-54 interaction domain N16961_RS00835 PF02954 Bacterial regulatory protein, Fis family N16961_RS00840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS00840 PF00989 PAS fold N16961_RS00840 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS00850 PF03951 Glutamine synthetase, beta-Grasp domain N16961_RS00850 PF00120 Glutamine synthetase, catalytic domain N16961_RS00860 PF00009 Elongation factor Tu GTP binding domain N16961_RS00860 PF03144 Elongation factor Tu domain 2 N16961_RS00860 PF00679 Elongation factor G C-terminus N16961_RS00865 PF03668 P-loop ATPase protein family N16961_RS00870 PF03631 Virulence factor BrkB N16961_RS00875 PF02580 D-Tyr-tRNA(Tyr) deacylase N16961_RS00880 PF00583 Acetyltransferase (GNAT) family N16961_RS00880 PF09500 Putative thioesterase (yiiD_Cterm) N16961_RS00890 PF01293 Phosphoenolpyruvate carboxykinase N16961_RS00895 PF01430 Hsp33 protein N16961_RS00900 PF01479 S4 domain N16961_RS00905 PF11356 Type II secretion system protein C N16961_RS00910 PF00263 Bacterial type II and III secretion system protein N16961_RS00910 PF03958 Bacterial type II/III secretion system short domain N16961_RS00915 PF00437 Type II/IV secretion system protein N16961_RS00920 PF00482 Type II secretion system (T2SS), protein F N16961_RS00925 PF08334 Type II secretion system (T2SS), protein G N16961_RS00925 PF07963 Prokaryotic N-terminal methylation motif N16961_RS00930 PF12019 Type II transport protein GspH N16961_RS00935 PF07963 Prokaryotic N-terminal methylation motif N16961_RS00935 PF02501 Type II secretion system (T2SS), protein I N16961_RS00940 PF11612 Type II secretion system (T2SS), protein J N16961_RS00940 PF07963 Prokaryotic N-terminal methylation motif N16961_RS00945 PF03934 Type II secretion system (T2SS), protein K N16961_RS00950 PF05134 Type II secretion system (T2SS), protein L N16961_RS00950 PF12693 GspL periplasmic domain N16961_RS00955 PF04612 Type II secretion system (T2SS), protein M N16961_RS00960 PF01203 Type II secretion system (T2SS), protein N N16961_RS00965 PF00459 Inositol monophosphatase family N16961_RS00970 PF00293 NUDIX domain N16961_RS00975 PF01106 NifU-like domain N16961_RS00975 PF01521 Iron-sulphur cluster biosynthesis N16961_RS00980 PF00156 Phosphoribosyl transferase domain N16961_RS00985 PF00561 alpha/beta hydrolase fold N16961_RS00995 PF16921 Tex protein YqgF-like domain N16961_RS00995 PF17674 HHH domain N16961_RS00995 PF09371 Tex-like protein N-terminal domain N16961_RS00995 PF00575 S1 RNA binding domain N16961_RS01000 PF03449 Transcription elongation factor, N-terminal N16961_RS01000 PF01272 Transcription elongation factor, GreA/GreB, C-term N16961_RS01005 PF00486 Transcriptional regulatory protein, C terminal N16961_RS01005 PF00072 Response regulator receiver domain N16961_RS01010 PF00672 HAMP domain N16961_RS01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS01010 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS01015 PF00860 Permease family N16961_RS01020 PF00271 Helicase conserved C-terminal domain N16961_RS01020 PF17191 RecG wedge domain N16961_RS01020 PF00270 DEAD/DEAH box helicase N16961_RS01025 PF04607 Region found in RelA / SpoT proteins N16961_RS01025 PF13291 ACT domain N16961_RS01025 PF02824 TGS domain N16961_RS01030 PF01192 RNA polymerase Rpb6 N16961_RS01035 PF00625 Guanylate kinase N16961_RS01040 PF02592 Putative vitamin uptake transporter N16961_RS01045 PF00474 Sodium:solute symporter family N16961_RS01055 PF02080 TrkA-C domain N16961_RS01055 PF00999 Sodium/hydrogen exchanger family N16961_RS01055 PF03471 Transporter associated domain N16961_RS01060 PF00196 Bacterial regulatory proteins, luxR family N16961_RS01060 PF00072 Response regulator receiver domain N16961_RS01065 PF11412 Disulphide bond corrector protein DsbC N16961_RS01065 PF02683 Cytochrome C biogenesis protein transmembrane region N16961_RS01075 PF03605 Anaerobic c4-dicarboxylate membrane transporter N16961_RS01080 PF00206 Lyase N16961_RS01080 PF10415 Fumarase C C-terminus N16961_RS01085 PF17158 Membrane-associated sensor, integral membrane domain N16961_RS01085 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS01090 PF04186 FxsA cytoplasmic membrane protein N16961_RS01095 PF00588 SpoU rRNA Methylase family N16961_RS01100 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N16961_RS01100 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N16961_RS01105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS01105 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS01105 PF00672 HAMP domain N16961_RS01105 PF16527 Two-component sensor protein CpxA, periplasmic domain N16961_RS01110 PF00072 Response regulator receiver domain N16961_RS01110 PF00486 Transcriptional regulatory protein, C terminal N16961_RS01120 PF16916 Dimerisation domain of Zinc Transporter N16961_RS01120 PF01545 Cation efflux family N16961_RS01125 PF00365 Phosphofructokinase N16961_RS01130 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded N16961_RS01135 PF06005 Cell division protein ZapB N16961_RS01140 PF02219 Methylenetetrahydrofolate reductase N16961_RS01145 PF00696 Amino acid kinase family N16961_RS01145 PF00742 Homoserine dehydrogenase N16961_RS01145 PF03447 Homoserine dehydrogenase, NAD binding domain N16961_RS01150 PF01053 Cys/Met metabolism PLP-dependent enzyme N16961_RS01155 PF01340 Met Apo-repressor, MetJ N16961_RS01160 PF03949 Malic enzyme, NAD binding domain N16961_RS01160 PF00390 Malic enzyme, N-terminal domain N16961_RS01165 PF01197 Ribosomal protein L31 N16961_RS01170 PF18074 Primosomal protein N C-terminal domain N16961_RS01170 PF00270 DEAD/DEAH box helicase N16961_RS01170 PF17764 3′ DNA-binding domain (3′BD) N16961_RS01170 PF00271 Helicase conserved C-terminal domain N16961_RS01170 PF18319 PriA DNA helicase Cys-rich region (CRR) domain N16961_RS01175 PF00356 Bacterial regulatory proteins, lacI family N16961_RS01180 PF05036 Sporulation related domain N16961_RS01185 PF00227 Proteasome subunit N16961_RS01190 PF00004 ATPase family associated with various cellular activities (AAA) N16961_RS01190 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_RS01190 PF07724 AAA domain (Cdc48 subfamily) N16961_RS01195 PF01040 UbiA prenyltransferase family N16961_RS01200 PF03737 Aldolase/RraA N16961_RS01205 PF01554 MatE N16961_RS01210 PF00121 Triosephosphate isomerase N16961_RS01235 PF00455 DeoR C terminal sensor domain N16961_RS01235 PF08220 DeoR-like helix-turn-helix domain N16961_RS01240 PF00166 Chaperonin 10 Kd subunit N16961_RS01245 PF00118 TCP-1/cpn60 chaperonin family N16961_RS01255 PF04055 Radical SAM superfamily N16961_RS01260 PF09285 Elongation factor P, C-terminal N16961_RS01260 PF08207 Elongation factor P (EF-P) KOW-like domain N16961_RS01260 PF01132 Elongation factor P (EF-P) OB domain N16961_RS01265 PF02313 Fumarate reductase subunit D N16961_RS01270 PF02300 Fumarate reductase subunit C N16961_RS01275 PF13183 4Fe-4S dicluster domain N16961_RS01275 PF13085 2Fe-2S iron-sulfur cluster binding domain N16961_RS01280 PF00890 FAD binding domain N16961_RS01280 PF02910 Fumarate reductase flavoprotein C-term N16961_RS01285 PF00152 tRNA synthetases class II (D, K and N) N16961_RS01290 PF00581 Rhodanese-like domain N16961_RS01295 PF02556 Preprotein translocase subunit SecB N16961_RS01300 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus N16961_RS01300 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus N16961_RS01305 PF06426 Serine acetyltransferase, N-terminal N16961_RS01305 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS01315 PF00311 Phosphoenolpyruvate carboxylase N16961_RS01320 PF07687 Peptidase dimerisation domain N16961_RS01320 PF01546 Peptidase family M20/M25/M40 N16961_RS01325 PF01118 Semialdehyde dehydrogenase, NAD binding domain N16961_RS01325 PF02774 Semialdehyde dehydrogenase, dimerisation domain N16961_RS01330 PF00696 Amino acid kinase family N16961_RS01335 PF00764 Arginosuccinate synthase N16961_RS01345 PF14698 Argininosuccinate lyase C-terminal N16961_RS01345 PF00206 Lyase N16961_RS01355 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS01355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_RS01360 PF08534 Redoxin N16961_RS01360 PF00462 Glutaredoxin N16961_RS01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS01365 PF03466 LysR substrate binding domain N16961_RS01370 PF17092 Penicillin-binding protein OB-like domain N16961_RS01370 PF00905 Penicillin binding protein transpeptidase domain N16961_RS01370 PF00912 Transglycosylase N16961_RS01390 PF04351 Pilus assembly protein, PilP N16961_RS01395 PF07660 Secretin and TonB N terminus short domain N16961_RS01395 PF00263 Bacterial type II and III secretion system protein N16961_RS01395 PF03958 Bacterial type II/III secretion system short domain N16961_RS01395 PF11741 AMIN domain N16961_RS01400 PF01202 Shikimate kinase N16961_RS01405 PF01761 3-dehydroquinate synthase N16961_RS01415 PF02086 D12 class N6 adenine-specific DNA methyltransferase N16961_RS01420 PF00834 Ribulose-phosphate 3 epimerase family N16961_RS01425 PF13419 Haloacid dehalogenase-like hydrolase N16961_RS01430 PF00579 tRNA synthetases class I (W and Y) N16961_RS01445 PF00919 Uncharacterized protein family UPF0004 N16961_RS01445 PF18693 TRAM domain N16961_RS01445 PF04055 Radical SAM superfamily N16961_RS01450 PF00117 Glutamine amidotransferase class-I N16961_RS01455 PF00202 Aminotransferase class-III N16961_RS01460 PF04958 Arginine N-succinyltransferase beta subunit N16961_RS01465 PF00171 Aldehyde dehydrogenase family N16961_RS01475 PF00027 Cyclic nucleotide-binding domain N16961_RS01475 PF13545 Crp-like helix-turn-helix domain N16961_RS01480 PF00485 Phosphoribulokinase / Uridine kinase family N16961_RS01485 PF06794 Uncharacterised protein family (UPF0270) N16961_RS01490 PF00561 alpha/beta hydrolase fold N16961_RS01500 PF00005 ABC transporter N16961_RS01500 PF12848 ABC transporter N16961_RS01505 PF02525 Flavodoxin-like fold N16961_RS01510 PF00999 Sodium/hydrogen exchanger family N16961_RS01510 PF02254 TrkA-N domain N16961_RS01520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_RS01525 PF01112 Asparaginase N16961_RS01530 PF00709 Adenylosuccinate synthetase N16961_RS01540 PF08238 Sel1 repeat N16961_RS01545 PF00884 Sulfatase N16961_RS01545 PF11893 Domain of unknown function (DUF3413) N16961_RS01550 PF17876 Cold shock domain N16961_RS01550 PF08206 Ribonuclease B OB domain N16961_RS01550 PF00773 RNB domain N16961_RS01550 PF08461 Ribonuclease R winged-helix domain N16961_RS01550 PF00575 S1 RNA binding domain N16961_RS01555 PF00588 SpoU rRNA Methylase family N16961_RS01555 PF08032 RNA 2'-O ribose methyltransferase substrate binding N16961_RS01560 PF00338 Ribosomal protein S10p/S20e N16961_RS01565 PF00297 Ribosomal protein L3 N16961_RS01570 PF00573 Ribosomal protein L4/L1 family N16961_RS01575 PF00276 Ribosomal protein L23 N16961_RS01580 PF03947 Ribosomal Proteins L2, C-terminal domain N16961_RS01580 PF00181 Ribosomal Proteins L2, RNA binding domain N16961_RS01585 PF00203 Ribosomal protein S19 N16961_RS01590 PF00237 Ribosomal protein L22p/L17e N16961_RS01595 PF07650 KH domain N16961_RS01595 PF00189 Ribosomal protein S3, C-terminal domain N16961_RS01600 PF00252 Ribosomal protein L16p/L10e N16961_RS01605 PF00831 Ribosomal L29 protein N16961_RS01610 PF00366 Ribosomal protein S17 N16961_RS01615 PF00238 Ribosomal protein L14p/L23e N16961_RS01620 PF00467 KOW motif N16961_RS01620 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 N16961_RS01625 PF00281 Ribosomal protein L5 N16961_RS01625 PF00673 ribosomal L5P family C-terminus N16961_RS01630 PF00253 Ribosomal protein S14p/S29e N16961_RS01635 PF00410 Ribosomal protein S8 N16961_RS01640 PF00347 Ribosomal protein L6 N16961_RS01645 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast N16961_RS01650 PF00333 Ribosomal protein S5, N-terminal domain N16961_RS01650 PF03719 Ribosomal protein S5, C-terminal domain N16961_RS01655 PF00327 Ribosomal protein L30p/L7e N16961_RS01660 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A N16961_RS01665 PF00344 SecY translocase N16961_RS01670 PF00444 Ribosomal protein L36 N16961_RS01675 PF00416 Ribosomal protein S13/S18 N16961_RS01680 PF00411 Ribosomal protein S11 N16961_RS01685 PF00163 Ribosomal protein S4/S9 N-terminal domain N16961_RS01685 PF01479 S4 domain N16961_RS01690 PF01000 RNA polymerase Rpb3/RpoA insert domain N16961_RS01690 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain N16961_RS01690 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain N16961_RS01695 PF01196 Ribosomal protein L17 N16961_RS01705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_RS01705 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N16961_RS01710 PF08525 Opacity-associated protein A N-terminal motif N16961_RS01710 PF04225 Opacity-associated protein A LysM-like domain N16961_RS01715 PF00892 EamA-like transporter family N16961_RS01720 PF13673 Acetyltransferase (GNAT) domain N16961_RS01725 PF00271 Helicase conserved C-terminal domain N16961_RS01725 PF00270 DEAD/DEAH box helicase N16961_RS01725 PF03880 DbpA RNA binding domain N16961_RS01735 PF00149 Calcineurin-like phosphoesterase N16961_RS01735 PF02872 5'-nucleotidase, C-terminal domain N16961_RS01740 PF10414 Sirohaem synthase dimerisation region N16961_RS01740 PF14824 Sirohaem biosynthesis protein central N16961_RS01740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N16961_RS01745 PF01507 Phosphoadenosine phosphosulfate reductase family N16961_RS01750 PF00009 Elongation factor Tu GTP binding domain N16961_RS01775 PF00005 ABC transporter N16961_RS01785 PF10795 Protein of unknown function (DUF2607) N16961_RS01790 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) N16961_RS01795 PF01625 Peptide methionine sulfoxide reductase N16961_RS01800 PF07244 Surface antigen variable number repeat N16961_RS01800 PF01103 Surface antigen N16961_RS01800 PF17243 POTRA domain TamA domain 1 N16961_RS01805 PF04357 TamB, inner membrane protein subunit of TAM complex N16961_RS01810 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like N16961_RS01815 PF00719 Inorganic pyrophosphatase N16961_RS01820 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain N16961_RS01830 PF08245 Mur ligase middle domain N16961_RS01830 PF02875 Mur ligase family, glutamate ligase domain N16961_RS01830 PF01225 Mur ligase family, catalytic domain N16961_RS01835 PF02441 Flavoprotein N16961_RS01845 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS01850 PF00005 ABC transporter N16961_RS01855 PF04751 Protein of unknown function (DUF615) N16961_RS01860 PF01523 Putative modulator of DNA gyrase N16961_RS01865 PF00571 CBS domain N16961_RS01865 PF03448 MgtE intracellular N domain N16961_RS01865 PF01769 Divalent cation transporter N16961_RS01870 PF00381 PTS HPr component phosphorylation site N16961_RS01875 PF03668 P-loop ATPase protein family N16961_RS01880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_RS01885 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N16961_RS01890 PF04552 Sigma-54, DNA binding domain N16961_RS01890 PF00309 Sigma-54 factor, Activator interacting domain (AID) N16961_RS01890 PF04963 Sigma-54 factor, core binding domain N16961_RS01895 PF00005 ABC transporter N16961_RS01895 PF12399 Branched-chain amino acid ATP-binding cassette transporter N16961_RS01900 PF03968 OstA-like protein N16961_RS01915 PF00571 CBS domain N16961_RS01915 PF01380 SIS domain N16961_RS01920 PF01699 Sodium/calcium exchanger protein N16961_RS01930 PF00005 ABC transporter N16961_RS01935 PF02405 Permease MlaE N16961_RS01940 PF02470 MlaD protein N16961_RS01945 PF05494 MlaC protein N16961_RS01955 PF01722 BolA-like protein N16961_RS01960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N16961_RS01965 PF01553 Acyltransferase N16961_RS01970 PF01042 Endoribonuclease L-PSP N16961_RS01975 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain N16961_RS01975 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain N16961_RS01980 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N16961_RS01980 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N16961_RS01985 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain N16961_RS01985 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain N16961_RS01990 PF02562 PhoH-like protein N16961_RS01990 PF13638 PIN domain N16961_RS02000 PF18339 RapA N-terminal Tudor like domain 1 N16961_RS02000 PF00271 Helicase conserved C-terminal domain N16961_RS02000 PF18337 RapA N-terminal Tudor like domain N16961_RS02000 PF12137 RNA polymerase recycling family C-terminal N16961_RS02000 PF00176 SNF2 family N-terminal domain N16961_RS02005 PF00849 RNA pseudouridylate synthase N16961_RS02010 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_RS02010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_RS02015 PF10458 Valyl tRNA synthetase tRNA binding arm N16961_RS02015 PF00133 tRNA synthetases class I (I, L, M and V) N16961_RS02015 PF08264 Anticodon-binding domain of tRNA N16961_RS02020 PF04364 DNA polymerase III chi subunit, HolC N16961_RS02025 PF02789 Cytosol aminopeptidase family, N-terminal domain N16961_RS02025 PF00883 Cytosol aminopeptidase family, catalytic domain N16961_RS02030 PF03739 Lipopolysaccharide export system permease LptF/LptG N16961_RS02035 PF03739 Lipopolysaccharide export system permease LptF/LptG N16961_RS02050 PF00072 Response regulator receiver domain N16961_RS02095 PF00694 Aconitase C-terminal domain N16961_RS02100 PF00330 Aconitase family (aconitate hydratase) N16961_RS02105 PF00180 Isocitrate/isopropylmalate dehydrogenase N16961_RS02110 PF00682 HMGL-like N16961_RS02110 PF08502 LeuA allosteric (dimerisation) domain N16961_RS02120 PF01569 PAP2 superfamily N16961_RS02130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS02130 PF03466 LysR substrate binding domain N16961_RS02135 PF00501 AMP-binding enzyme N16961_RS02140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_RS02140 PF00205 Thiamine pyrophosphate enzyme, central domain N16961_RS02140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_RS02145 PF10369 Small subunit of acetolactate synthase N16961_RS02150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_RS02150 PF01842 ACT domain N16961_RS02150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_RS02155 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) N16961_RS02160 PF01812 5-formyltetrahydrofolate cyclo-ligase family N16961_RS02170 PF05164 Cell division protein ZapA N16961_RS02175 PF03695 Uncharacterised protein family (UPF0149) N16961_RS02180 PF01494 FAD binding domain N16961_RS02185 PF01494 FAD binding domain N16961_RS02200 PF03937 Flavinator of succinate dehydrogenase N16961_RS02210 PF00890 FAD binding domain N16961_RS02210 PF02910 Fumarate reductase flavoprotein C-term N16961_RS02220 PF08281 Sigma-70, region 4 N16961_RS02220 PF04542 Sigma-70 region 2 N16961_RS02225 PF03872 Anti sigma-E protein RseA, N-terminal domain N16961_RS02225 PF03873 Anti sigma-E protein RseA, C-terminal domain N16961_RS02230 PF03888 MucB/RseB N-terminal domain N16961_RS02230 PF17188 MucB/RseB C-terminal domain N16961_RS02240 PF00679 Elongation factor G C-terminus N16961_RS02240 PF00009 Elongation factor Tu GTP binding domain N16961_RS02240 PF03144 Elongation factor Tu domain 2 N16961_RS02240 PF06421 GTP-binding protein LepA C-terminus N16961_RS02245 PF10502 Signal peptidase, peptidase S26 N16961_RS02250 PF14622 Ribonuclease-III-like N16961_RS02250 PF00035 Double-stranded RNA binding motif N16961_RS02255 PF01926 50S ribosome-binding GTPase N16961_RS02255 PF07650 KH domain N16961_RS02260 PF02565 Recombination protein O C terminal N16961_RS02260 PF11967 Recombination protein O N terminal N16961_RS02265 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ N16961_RS02270 PF01648 4'-phosphopantetheinyl transferase superfamily N16961_RS02285 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS02285 PF00563 EAL domain N16961_RS02290 PF00672 HAMP domain N16961_RS02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS02290 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS02290 PF01627 Hpt domain N16961_RS02290 PF00072 Response regulator receiver domain N16961_RS02290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N16961_RS02295 PF05958 tRNA (Uracil-5-)-methyltransferase N16961_RS02295 PF01938 TRAM domain N16961_RS02300 PF02824 TGS domain N16961_RS02300 PF04607 Region found in RelA / SpoT proteins N16961_RS02300 PF13291 ACT domain N16961_RS02305 PF03819 MazG nucleotide pyrophosphohydrolase domain N16961_RS02310 PF06418 CTP synthase N-terminus N16961_RS02310 PF00117 Glutamine amidotransferase class-I N16961_RS02315 PF03952 Enolase, N-terminal domain N16961_RS02315 PF00113 Enolase, C-terminal TIM barrel domain N16961_RS02320 PF12627 Probable RNA and SrmB- binding site of polymerase A N16961_RS02320 PF01743 Poly A polymerase head domain N16961_RS02320 PF01966 HD domain N16961_RS02325 PF13401 AAA domain N16961_RS02325 PF01471 Putative peptidoglycan binding domain N16961_RS02335 PF08239 Bacterial SH3 domain N16961_RS02340 PF01384 Phosphate transporter family N16961_RS02345 PF01865 Protein of unknown function DUF47 N16961_RS02350 PF01928 CYTH domain N16961_RS02355 PF02743 Cache domain N16961_RS02355 PF00672 HAMP domain N16961_RS02355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS02360 PF03710 Glutamate-ammonia ligase adenylyltransferase N16961_RS02360 PF08335 GlnD PII-uridylyltransferase N16961_RS02365 PF01467 Cytidylyltransferase-like N16961_RS02365 PF00294 pfkB family carbohydrate kinase N16961_RS02370 PF02321 Outer membrane efflux protein N16961_RS02375 PF00293 NUDIX domain N16961_RS02380 PF06853 Protein of unknown function (DUF1249) N16961_RS02385 PF00149 Calcineurin-like phosphoesterase N16961_RS02390 PF05728 Uncharacterised protein family (UPF0227) N16961_RS02395 PF01751 Toprim domain N16961_RS02395 PF00986 DNA gyrase B subunit, carboxyl terminus N16961_RS02395 PF00204 DNA gyrase B N16961_RS02395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS02400 PF03989 DNA gyrase C-terminal domain, beta-propeller N16961_RS02400 PF00521 DNA gyrase/topoisomerase IV, subunit A N16961_RS02405 PF03884 DNA gyrase inhibitor YacG N16961_RS02410 PF07072 Cell division protein N16961_RS02415 PF01121 Dephospho-CoA kinase N16961_RS02420 PF06750 Bacterial Peptidase A24 N-terminal domain N16961_RS02420 PF01478 Type IV leader peptidase family N16961_RS02425 PF00482 Type II secretion system (T2SS), protein F N16961_RS02430 PF00437 Type II/IV secretion system protein N16961_RS02430 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N16961_RS02435 PF07963 Prokaryotic N-terminal methylation motif N16961_RS02435 PF00114 Pilin (bacterial filament) N16961_RS02440 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain N16961_RS02440 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain N16961_RS02445 PF01510 N-acetylmuramoyl-L-alanine amidase N16961_RS02450 PF00258 Flavodoxin N16961_RS02455 PF02899 Phage integrase, N-terminal SAM-like domain N16961_RS02455 PF00589 Phage integrase family N16961_RS02460 PF13098 Thioredoxin-like domain N16961_RS02460 PF10411 Disulfide bond isomerase protein N-terminus N16961_RS02465 PF02272 DHHA1 domain N16961_RS02465 PF17768 RecJ OB domain N16961_RS02465 PF01368 DHH family N16961_RS02470 PF00149 Calcineurin-like phosphoesterase N16961_RS02470 PF02872 5'-nucleotidase, C-terminal domain N16961_RS02480 PF00392 Bacterial regulatory proteins, gntR family N16961_RS02480 PF07729 FCD domain N16961_RS02485 PF00456 Transketolase, thiamine diphosphate binding domain N16961_RS02485 PF17831 Pyruvate dehydrogenase E1 component middle domain N16961_RS02490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N16961_RS02490 PF02817 e3 binding domain N16961_RS02490 PF00364 Biotin-requiring enzyme N16961_RS02495 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS02495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_RS02505 PF01795 MraW methylase family N16961_RS02510 PF04999 Cell division protein FtsL N16961_RS02515 PF03717 Penicillin-binding Protein dimerisation domain N16961_RS02515 PF00905 Penicillin binding protein transpeptidase domain N16961_RS02520 PF08245 Mur ligase middle domain N16961_RS02520 PF01225 Mur ligase family, catalytic domain N16961_RS02520 PF02875 Mur ligase family, glutamate ligase domain N16961_RS02525 PF08245 Mur ligase middle domain N16961_RS02525 PF01225 Mur ligase family, catalytic domain N16961_RS02525 PF02875 Mur ligase family, glutamate ligase domain N16961_RS02530 PF00953 Glycosyl transferase family 4 N16961_RS02530 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 N16961_RS02535 PF02875 Mur ligase family, glutamate ligase domain N16961_RS02535 PF08245 Mur ligase middle domain N16961_RS02540 PF01098 Cell cycle protein N16961_RS02545 PF03033 Glycosyltransferase family 28 N-terminal domain N16961_RS02545 PF04101 Glycosyltransferase family 28 C-terminal domain N16961_RS02550 PF08245 Mur ligase middle domain N16961_RS02550 PF02875 Mur ligase family, glutamate ligase domain N16961_RS02550 PF01225 Mur ligase family, catalytic domain N16961_RS02555 PF03799 Cell division protein FtsQ N16961_RS02555 PF08478 POTRA domain, FtsQ-type N16961_RS02560 PF02491 SHS2 domain inserted in FTSA N16961_RS02565 PF00091 Tubulin/FtsZ family, GTPase domain N16961_RS02565 PF12327 FtsZ family, C-terminal domain N16961_RS02570 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase N16961_RS02580 PF01043 SecA preprotein cross-linking domain N16961_RS02580 PF07516 SecA Wing and Scaffold domain N16961_RS02580 PF02810 SEC-C motif N16961_RS02580 PF07517 SecA DEAD-like domain N16961_RS02585 PF00293 NUDIX domain N16961_RS02590 PF01113 Dihydrodipicolinate reductase, N-terminus N16961_RS02590 PF05173 Dihydrodipicolinate reductase, C-terminus N16961_RS02600 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain N16961_RS02600 PF00117 Glutamine amidotransferase class-I N16961_RS02605 PF02142 MGS-like domain N16961_RS02605 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain N16961_RS02605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N16961_RS02625 PF00005 ABC transporter N16961_RS02630 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) N16961_RS02635 PF01925 Sulfite exporter TauE/SafE N16961_RS02640 PF03466 LysR substrate binding domain N16961_RS02640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS02645 PF03458 UPF0126 domain N16961_RS02650 PF01497 Periplasmic binding protein N16961_RS02660 PF01048 Phosphorylase superfamily N16961_RS02670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N16961_RS02670 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS02675 PF00310 Glutamine amidotransferases class-II N16961_RS02675 PF01493 GXGXG motif N16961_RS02675 PF01645 Conserved region in glutamate synthase N16961_RS02675 PF04898 Glutamate synthase central domain N16961_RS02680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster N16961_RS02680 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS02685 PF01493 GXGXG motif N16961_RS02685 PF01645 Conserved region in glutamate synthase N16961_RS02685 PF04898 Glutamate synthase central domain N16961_RS02685 PF00310 Glutamine amidotransferases class-II N16961_RS02690 PF04055 Radical SAM superfamily N16961_RS02690 PF16199 Radical_SAM C-terminal domain N16961_RS02695 PF00360 Phytochrome region N16961_RS02695 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS02695 PF00563 EAL domain N16961_RS02695 PF01590 GAF domain N16961_RS02700 PF00072 Response regulator receiver domain N16961_RS02700 PF18415 Histidine kinase receptor ArcB trans-membrane domain N16961_RS02700 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS02700 PF00989 PAS fold N16961_RS02700 PF01627 Hpt domain N16961_RS02700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS02705 PF00072 Response regulator receiver domain N16961_RS02705 PF00486 Transcriptional regulatory protein, C terminal N16961_RS02715 PF03737 Aldolase/RraA N16961_RS02730 PF00742 Homoserine dehydrogenase N16961_RS02730 PF03447 Homoserine dehydrogenase, NAD binding domain N16961_RS02730 PF01842 ACT domain N16961_RS02730 PF13840 ACT domain N16961_RS02730 PF00696 Amino acid kinase family N16961_RS02735 PF08544 GHMP kinases C terminal N16961_RS02735 PF00288 GHMP kinases N terminal domain N16961_RS02740 PF14821 Threonine synthase N terminus N16961_RS02740 PF00291 Pyridoxal-phosphate dependent enzyme N16961_RS02745 PF01228 Glycine radical N16961_RS02750 PF01261 Xylose isomerase-like TIM barrel N16961_RS02755 PF03167 Uracil DNA glycosylase superfamily N16961_RS02770 PF01235 Sodium:alanine symporter family N16961_RS02775 PF03883 Peroxide stress protein YaaA N16961_RS02780 PF01026 TatD related DNase N16961_RS02785 PF07670 Nucleoside recognition N16961_RS02785 PF07662 Na+ dependent nucleoside transporter C-terminus N16961_RS02785 PF01773 Na+ dependent nucleoside transporter N-terminus N16961_RS02795 PF01791 DeoC/LacD family aldolase N16961_RS02800 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain N16961_RS02800 PF00591 Glycosyl transferase family, a/b domain N16961_RS02800 PF02885 Glycosyl transferase family, helical bundle domain N16961_RS02805 PF01676 Metalloenzyme superfamily N16961_RS02810 PF01048 Phosphorylase superfamily N16961_RS02820 PF18429 Domain of unknown function (DUF5609) N16961_RS02835 PF18073 Rubredoxin metal binding domain N16961_RS02840 PF00679 Elongation factor G C-terminus N16961_RS02840 PF14492 Elongation Factor G, domain II N16961_RS02840 PF03764 Elongation factor G, domain IV N16961_RS02840 PF00009 Elongation factor Tu GTP binding domain N16961_RS02840 PF03144 Elongation factor Tu domain 2 N16961_RS02845 PF00501 AMP-binding enzyme N16961_RS02850 PF00072 Response regulator receiver domain N16961_RS02860 PF02837 Glycosyl hydrolases family 2, sugar binding domain N16961_RS02860 PF02836 Glycosyl hydrolases family 2, TIM barrel domain N16961_RS02860 PF00703 Glycosyl hydrolases family 2 N16961_RS02860 PF16353 Domain of unknown function(DUF4981) N16961_RS02860 PF02929 Beta galactosidase small chain N16961_RS02865 PF00356 Bacterial regulatory proteins, lacI family N16961_RS02870 PF01588 Putative tRNA binding domain N16961_RS02880 PF01544 CorA-like Mg2+ transporter protein N16961_RS02885 PF02080 TrkA-C domain N16961_RS02885 PF08443 RimK-like ATP-grasp domain N16961_RS02885 PF18030 RimK PreATP-grasp domain N16961_RS02890 PF00583 Acetyltransferase (GNAT) family N16961_RS02900 PF14602 Hexapeptide repeat of succinyl-transferase N16961_RS02900 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle N16961_RS02905 PF07130 YebG protein N16961_RS02920 PF17946 RecC C-terminal domain N16961_RS02925 PF00580 UvrD/REP helicase N-terminal domain N16961_RS02925 PF13361 UvrD-like helicase C-terminal domain N16961_RS02925 PF12705 PD-(D/E)XK nuclease superfamily N16961_RS02930 PF13538 UvrD-like helicase C-terminal domain N16961_RS02940 PF00583 Acetyltransferase (GNAT) family N16961_RS02940 PF00696 Amino acid kinase family N16961_RS02950 PF03562 MltA specific insert domain N16961_RS02950 PF06725 3D domain N16961_RS02955 PF00899 ThiF family N16961_RS02960 PF02657 Fe-S metabolism associated domain N16961_RS02965 PF00266 Aminotransferase class-V N16961_RS02970 PF01965 DJ-1/PfpI family N16961_RS02975 PF02558 Ketopantoate reductase PanE/ApbA N16961_RS02975 PF08546 Ketopantoate reductase PanE/ApbA C terminal N16961_RS02980 PF03502 Nucleoside-specific channel-forming protein, Tsx N16961_RS02990 PF04545 Sigma-70, region 4 N16961_RS02990 PF04542 Sigma-70 region 2 N16961_RS03000 PF07690 Major Facilitator Superfamily N16961_RS03010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N16961_RS03020 PF05175 Methyltransferase small domain N16961_RS03025 PF01722 BolA-like protein N16961_RS03030 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) N16961_RS03030 PF11973 NQRA C-terminal domain N16961_RS03035 PF03116 NQR2, RnfD, RnfE family N16961_RS03040 PF04205 FMN-binding domain N16961_RS03045 PF02508 Rnf-Nqr subunit, membrane protein N16961_RS03050 PF02508 Rnf-Nqr subunit, membrane protein N16961_RS03055 PF00175 Oxidoreductase NAD-binding domain N16961_RS03055 PF00970 Oxidoreductase FAD-binding domain N16961_RS03055 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_RS03060 PF02424 ApbE family N16961_RS03070 PF00817 impB/mucB/samB family N16961_RS03070 PF11798 IMS family HHH motif N16961_RS03080 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS03080 PF17158 Membrane-associated sensor, integral membrane domain N16961_RS03085 PF00209 Sodium:neurotransmitter symporter family N16961_RS03095 PF08443 RimK-like ATP-grasp domain N16961_RS03095 PF18030 RimK PreATP-grasp domain N16961_RS03100 PF18030 RimK PreATP-grasp domain N16961_RS03100 PF08443 RimK-like ATP-grasp domain N16961_RS03105 PF07687 Peptidase dimerisation domain N16961_RS03105 PF01546 Peptidase family M20/M25/M40 N16961_RS03110 PF00860 Permease family N16961_RS03115 PF00156 Phosphoribosyl transferase domain N16961_RS03120 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) N16961_RS03125 PF07417 Sigma factor-binding transcriptional regulator Crl N16961_RS03130 PF01472 PUA domain N16961_RS03130 PF00696 Amino acid kinase family N16961_RS03135 PF00171 Aldehyde dehydrogenase family N16961_RS03140 PF03477 ATP cone domain N16961_RS03145 PF01872 RibD C-terminal domain N16961_RS03145 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_RS03150 PF00677 Lumazine binding domain N16961_RS03155 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N16961_RS03155 PF00925 GTP cyclohydrolase II N16961_RS03160 PF00885 6,7-dimethyl-8-ribityllumazine synthase N16961_RS03165 PF01029 NusB family N16961_RS03170 PF00586 AIR synthase related protein, N-terminal domain N16961_RS03170 PF02769 AIR synthase related protein, C-terminal domain N16961_RS03175 PF04608 Phosphatidylglycerophosphatase A N16961_RS03180 PF11944 Protein of unknown function (DUF3461) N16961_RS03190 PF01909 Nucleotidyltransferase domain N16961_RS03190 PF08335 GlnD PII-uridylyltransferase N16961_RS03190 PF01966 HD domain N16961_RS03195 PF00557 Metallopeptidase family M24 N16961_RS03200 PF00318 Ribosomal protein S2 N16961_RS03205 PF00889 Elongation factor TS N16961_RS03210 PF00696 Amino acid kinase family N16961_RS03215 PF01765 Ribosome recycling factor N16961_RS03220 PF01255 Putative undecaprenyl diphosphate synthase N16961_RS03230 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain N16961_RS03230 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase N16961_RS03230 PF13288 DXP reductoisomerase C-terminal domain N16961_RS03235 PF02163 Peptidase family M50 N16961_RS03235 PF17820 PDZ domain N16961_RS03240 PF07244 Surface antigen variable number repeat N16961_RS03240 PF01103 Surface antigen N16961_RS03245 PF03938 Outer membrane protein (OmpH-like) N16961_RS03250 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD N16961_RS03250 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS03255 PF07977 FabA-like domain N16961_RS03260 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS03260 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 N16961_RS03265 PF02684 Lipid-A-disaccharide synthetase N16961_RS03270 PF01351 Ribonuclease HII N16961_RS03275 PF02811 PHP domain N16961_RS03275 PF14579 Helix-hairpin-helix motif N16961_RS03275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain N16961_RS03275 PF07733 Bacterial DNA polymerase III alpha NTPase domain N16961_RS03275 PF01336 OB-fold nucleic acid binding domain N16961_RS03280 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit N16961_RS03285 PF01171 PP-loop family N16961_RS03285 PF09179 TilS substrate binding domain N16961_RS03285 PF11734 TilS substrate C-terminal domain N16961_RS03290 PF00034 Cytochrome c N16961_RS03295 PF05870 Phenolic acid decarboxylase (PAD) N16961_RS03300 PF00543 Nitrogen regulatory protein P-II N16961_RS03305 PF03372 Endonuclease/Exonuclease/phosphatase family N16961_RS03310 PF01476 LysM domain N16961_RS03310 PF01464 Transglycosylase SLT domain N16961_RS03315 PF16123 Hydroxyacylglutathione hydrolase C-terminus N16961_RS03315 PF00753 Metallo-beta-lactamase superfamily N16961_RS03320 PF08241 Methyltransferase domain N16961_RS03325 PF00075 RNase H N16961_RS03330 PF00929 Exonuclease N16961_RS03340 PF02770 Acyl-CoA dehydrogenase, middle domain N16961_RS03340 PF09317 Domain of unknown function (DUF1974) N16961_RS03340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N16961_RS03340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N16961_RS03345 PF13580 SIS domain N16961_RS03350 PF13230 Glutamine amidotransferases class-II N16961_RS03355 PF00551 Formyl transferase N16961_RS03360 PF00586 AIR synthase related protein, N-terminal domain N16961_RS03360 PF02769 AIR synthase related protein, C-terminal domain N16961_RS03370 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS03375 PF01479 S4 domain N16961_RS03375 PF00849 RNA pseudouridylate synthase N16961_RS03380 PF01713 Smr domain N16961_RS03395 PF01963 TraB family N16961_RS03400 PF03173 Putative carbohydrate binding domain N16961_RS03400 PF02838 Glycosyl hydrolase family 20, domain 2 N16961_RS03400 PF00728 Glycosyl hydrolase family 20, catalytic domain N16961_RS03400 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain N16961_RS03410 PF00403 Heavy-metal-associated domain N16961_RS03415 PF00749 tRNA synthetases class I (E and Q), catalytic domain N16961_RS03420 PF01389 OmpA-like transmembrane domain N16961_RS03420 PF00691 OmpA family N16961_RS03430 PF07715 TonB-dependent Receptor Plug Domain N16961_RS03435 PF04954 Siderophore-interacting protein N16961_RS03435 PF08021 Siderophore-interacting FAD-binding domain N16961_RS03440 PF00550 Phosphopantetheine attachment site N16961_RS03440 PF08242 Methyltransferase domain N16961_RS03440 PF00668 Condensation domain N16961_RS03440 PF00501 AMP-binding enzyme N16961_RS03475 PF00072 Response regulator receiver domain N16961_RS03475 PF01584 CheW-like domain N16961_RS03480 PF01739 CheR methyltransferase, SAM binding domain N16961_RS03480 PF03705 CheR methyltransferase, all-alpha domain N16961_RS03485 PF00460 Flagella basal body rod protein N16961_RS03490 PF00460 Flagella basal body rod protein N16961_RS03490 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_RS03495 PF03963 Flagellar hook capping protein - N-terminal region N16961_RS03495 PF13860 FlgD Ig-like domain N16961_RS03495 PF13861 FlgD Tudor-like domain N16961_RS03500 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_RS03500 PF00460 Flagella basal body rod protein N16961_RS03500 PF07559 Flagellar basal body protein FlaE N16961_RS03505 PF00460 Flagella basal body rod protein N16961_RS03505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_RS03510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_RS03510 PF00460 Flagella basal body rod protein N16961_RS03515 PF02107 Flagellar L-ring protein N16961_RS03520 PF02119 Flagellar P-ring protein N16961_RS03525 PF10135 Rod binding protein N16961_RS03525 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase N16961_RS03530 PF07196 Flagellin hook IN motif N16961_RS03530 PF06429 Flagellar basal body rod FlgEFG protein C-terminal N16961_RS03540 PF00669 Bacterial flagellin N-terminal helical region N16961_RS03540 PF00700 Bacterial flagellin C-terminal helical region N16961_RS03540 PF07196 Flagellin hook IN motif N16961_RS03545 PF00669 Bacterial flagellin N-terminal helical region N16961_RS03545 PF07196 Flagellin hook IN motif N16961_RS03545 PF00700 Bacterial flagellin C-terminal helical region N16961_RS03630 PF01926 50S ribosome-binding GTPase N16961_RS03630 PF06071 Protein of unknown function (DUF933) N16961_RS03635 PF01195 Peptidyl-tRNA hydrolase N16961_RS03640 PF14572 Phosphoribosyl synthetase-associated domain N16961_RS03640 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase N16961_RS03645 PF08544 GHMP kinases C terminal N16961_RS03645 PF00288 GHMP kinases N terminal domain N16961_RS03650 PF03550 Outer membrane lipoprotein LolB N16961_RS03655 PF01488 Shikimate / quinate 5-dehydrogenase N16961_RS03655 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain N16961_RS03655 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain N16961_RS03660 PF00472 RF-1 domain N16961_RS03660 PF03462 PCRF domain N16961_RS03665 PF17827 PrmC N-terminal domain N16961_RS03665 PF13847 Methyltransferase domain N16961_RS03670 PF04247 Invasion gene expression up-regulator, SirB N16961_RS03675 PF13369 Transglutaminase-like superfamily N16961_RS03680 PF00793 DAHP synthetase I family N16961_RS03685 PF02872 5'-nucleotidase, C-terminal domain N16961_RS03685 PF00149 Calcineurin-like phosphoesterase N16961_RS03690 PF04073 Aminoacyl-tRNA editing domain N16961_RS03695 PF00860 Permease family N16961_RS03710 PF03358 NADPH-dependent FMN reductase N16961_RS03715 PF03960 ArsC family N16961_RS03720 PF01435 Peptidase family M48 N16961_RS03720 PF13181 Tetratricopeptide repeat N16961_RS03730 PF01594 AI-2E family transporter N16961_RS03735 PF02743 Cache domain N16961_RS03735 PF00672 HAMP domain N16961_RS03735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS03740 PF00578 AhpC/TSA family N16961_RS03750 PF00701 Dihydrodipicolinate synthetase family N16961_RS03755 PF06804 NlpB/DapX lipoprotein N16961_RS03765 PF02557 D-alanyl-D-alanine carboxypeptidase N16961_RS03770 PF01546 Peptidase family M20/M25/M40 N16961_RS03770 PF07687 Peptidase dimerisation domain N16961_RS03775 PF03960 ArsC family N16961_RS03790 PF11143 Protein of unknown function (DUF2919) N16961_RS03795 PF04261 Dyp-type peroxidase family N16961_RS03800 PF07196 Flagellin hook IN motif N16961_RS03800 PF00700 Bacterial flagellin C-terminal helical region N16961_RS03800 PF00669 Bacterial flagellin N-terminal helical region N16961_RS03805 PF07196 Flagellin hook IN motif N16961_RS03805 PF00700 Bacterial flagellin C-terminal helical region N16961_RS03805 PF00669 Bacterial flagellin N-terminal helical region N16961_RS03810 PF07196 Flagellin hook IN motif N16961_RS03810 PF00669 Bacterial flagellin N-terminal helical region N16961_RS03810 PF00700 Bacterial flagellin C-terminal helical region N16961_RS03815 PF03646 FlaG protein N16961_RS03820 PF07196 Flagellin hook IN motif N16961_RS03820 PF07195 Flagellar hook-associated protein 2 C-terminus N16961_RS03820 PF02465 Flagellar hook-associated protein 2 N-terminus N16961_RS03830 PF02561 Flagellar protein FliS N16961_RS03835 PF06490 Flagellar regulatory protein FleQ N16961_RS03835 PF02954 Bacterial regulatory protein, Fis family N16961_RS03835 PF00158 Sigma-54 interaction domain N16961_RS03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS03840 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS03840 PF13188 PAS domain N16961_RS03845 PF00072 Response regulator receiver domain N16961_RS03845 PF02954 Bacterial regulatory protein, Fis family N16961_RS03845 PF00158 Sigma-54 interaction domain N16961_RS03850 PF02049 Flagellar hook-basal body complex protein FliE N16961_RS03855 PF08345 Flagellar M-ring protein C-terminal N16961_RS03855 PF01514 Secretory protein of YscJ/FliF family N16961_RS03860 PF14842 FliG N-terminal domain N16961_RS03860 PF01706 FliG C-terminal domain N16961_RS03860 PF14841 FliG middle domain N16961_RS03865 PF02108 Flagellar assembly protein FliH N16961_RS03870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_RS03870 PF18269 T3SS EscN ATPase C-terminal domain N16961_RS03890 PF03748 Flagellar basal body-associated protein FliL N16961_RS03895 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N16961_RS03895 PF02154 Flagellar motor switch protein FliM N16961_RS03900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term N16961_RS03905 PF04347 Flagellar biosynthesis protein, FliO N16961_RS03910 PF00813 FliP family N16961_RS03915 PF01313 Bacterial export proteins, family 3 N16961_RS03920 PF01311 Bacterial export proteins, family 1 N16961_RS03925 PF01312 FlhB HrpN YscU SpaS Family N16961_RS03930 PF01713 Smr domain N16961_RS03935 PF05175 Methyltransferase small domain N16961_RS03945 PF01264 Chorismate synthase N16961_RS03950 PF03458 UPF0126 domain N16961_RS03955 PF04315 Elongation factor P hydroxylase N16961_RS03960 PF08891 YfcL protein N16961_RS03965 PF03358 NADPH-dependent FMN reductase N16961_RS03970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase N16961_RS03970 PF01266 FAD dependent oxidoreductase N16961_RS03975 PF02801 Beta-ketoacyl synthase, C-terminal domain N16961_RS03975 PF00109 Beta-ketoacyl synthase, N-terminal domain N16961_RS03980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_RS03980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_RS03980 PF11890 Domain of unknown function (DUF3410) N16961_RS03985 PF02774 Semialdehyde dehydrogenase, dimerisation domain N16961_RS03985 PF01118 Semialdehyde dehydrogenase, NAD binding domain N16961_RS03990 PF01475 Ferric uptake regulator family N16961_RS04000 PF03466 LysR substrate binding domain N16961_RS04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS04005 PF03788 LrgA family N16961_RS04010 PF04172 LrgB-like family N16961_RS04015 PF00258 Flavodoxin N16961_RS04025 PF12697 Alpha/beta hydrolase family N16961_RS04030 PF17206 SeqA protein N-terminal domain N16961_RS04030 PF03925 SeqA protein C-terminal domain N16961_RS04035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_RS04035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_RS04035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_RS04035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_RS04045 PF01784 NIF3 (NGG1p interacting factor 3) N16961_RS04050 PF00285 Citrate synthase, C-terminal domain N16961_RS04055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N16961_RS04060 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit N16961_RS04065 PF00890 FAD binding domain N16961_RS04065 PF02910 Fumarate reductase flavoprotein C-term N16961_RS04070 PF13085 2Fe-2S iron-sulfur cluster binding domain N16961_RS04075 PF16870 2-oxoglutarate dehydrogenase C-terminal N16961_RS04075 PF00676 Dehydrogenase E1 component N16961_RS04075 PF16078 2-oxoglutarate dehydrogenase N-terminus N16961_RS04075 PF02779 Transketolase, pyrimidine binding domain N16961_RS04080 PF00364 Biotin-requiring enzyme N16961_RS04080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) N16961_RS04080 PF02817 e3 binding domain N16961_RS04085 PF00549 CoA-ligase N16961_RS04085 PF08442 ATP-grasp domain N16961_RS04090 PF00549 CoA-ligase N16961_RS04090 PF02629 CoA binding domain N16961_RS04095 PF00950 ABC 3 transport family N16961_RS04100 PF00005 ABC transporter N16961_RS04105 PF01297 Zinc-uptake complex component A periplasmic N16961_RS04110 PF02311 AraC-like ligand binding domain N16961_RS04110 PF12833 Helix-turn-helix domain N16961_RS04115 PF04023 FeoA domain N16961_RS04120 PF07664 Ferrous iron transport protein B C terminus N16961_RS04120 PF07670 Nucleoside recognition N16961_RS04120 PF02421 Ferrous iron transport protein B N16961_RS04135 PF00750 tRNA synthetases class I (R) N16961_RS04135 PF05746 DALR anticodon binding domain N16961_RS04135 PF03485 Arginyl tRNA synthetase N terminal domain N16961_RS04145 PF05193 Peptidase M16 inactive domain N16961_RS04145 PF00675 Insulinase (Peptidase family M16) N16961_RS04150 PF00300 Histidine phosphatase superfamily (branch 1) N16961_RS04155 PF00771 FHIPEP family N16961_RS04160 PF00448 SRP54-type protein, GTPase domain N16961_RS04165 PF10609 NUBPL iron-transfer P-loop NTPase N16961_RS04170 PF04542 Sigma-70 region 2 N16961_RS04170 PF04545 Sigma-70, region 4 N16961_RS04170 PF04539 Sigma-70 region 3 N16961_RS04175 PF00072 Response regulator receiver domain N16961_RS04180 PF04344 Chemotaxis phosphatase, CheZ N16961_RS04185 PF01584 CheW-like domain N16961_RS04185 PF01627 Hpt domain N16961_RS04185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS04185 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_RS04185 PF00072 Response regulator receiver domain N16961_RS04190 PF01339 CheB methylesterase N16961_RS04190 PF00072 Response regulator receiver domain N16961_RS04195 PF13614 AAA domain N16961_RS04205 PF01584 CheW-like domain N16961_RS04215 PF00005 ABC transporter N16961_RS04220 PF03379 CcmB protein N16961_RS04225 PF01578 Cytochrome C assembly protein N16961_RS04230 PF04995 Heme exporter protein D (CcmD) N16961_RS04235 PF03100 CcmE N16961_RS04240 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal N16961_RS04240 PF01578 Cytochrome C assembly protein N16961_RS04245 PF08534 Redoxin N16961_RS04250 PF03918 Cytochrome C biogenesis protein N16961_RS04260 PF04333 MlaA lipoprotein N16961_RS04275 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain N16961_RS04275 PF02777 Iron/manganese superoxide dismutases, C-terminal domain N16961_RS04280 PF00462 Glutaredoxin N16961_RS04285 PF01131 DNA topoisomerase N16961_RS04285 PF01751 Toprim domain N16961_RS04290 PF00850 Histone deacetylase domain N16961_RS04305 PF00884 Sulfatase N16961_RS04305 PF11893 Domain of unknown function (DUF3413) N16961_RS04310 PF07208 Protein of unknown function (DUF1414) N16961_RS04315 PF04245 37-kD nucleoid-associated bacterial protein N16961_RS04325 PF03553 Na+/H+ antiporter family N16961_RS04330 PF01118 Semialdehyde dehydrogenase, NAD binding domain N16961_RS04330 PF02774 Semialdehyde dehydrogenase, dimerisation domain N16961_RS04335 PF01914 MarC family integral membrane protein N16961_RS04340 PF00465 Iron-containing alcohol dehydrogenase N16961_RS04340 PF00171 Aldehyde dehydrogenase family N16961_RS04355 PF00916 Sulfate permease family N16961_RS04355 PF01740 STAS domain N16961_RS04360 PF00575 S1 RNA binding domain N16961_RS04360 PF12111 Polyribonucleotide phosphorylase C terminal N16961_RS04360 PF10150 Ribonuclease E/G family N16961_RS04375 PF01479 S4 domain N16961_RS04375 PF00849 RNA pseudouridylate synthase N16961_RS04380 PF02545 Maf-like protein N16961_RS04385 PF02620 Large ribosomal RNA subunit accumulation protein YceD N16961_RS04390 PF01783 Ribosomal L32p protein family N16961_RS04395 PF02504 Fatty acid synthesis protein N16961_RS04400 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N16961_RS04400 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N16961_RS04405 PF00698 Acyl transferase domain N16961_RS04415 PF00550 Phosphopantetheine attachment site N16961_RS04420 PF00109 Beta-ketoacyl synthase, N-terminal domain N16961_RS04420 PF02801 Beta-ketoacyl synthase, C-terminal domain N16961_RS04425 PF01063 Amino-transferase class IV N16961_RS04430 PF02618 YceG-like family N16961_RS04435 PF02223 Thymidylate kinase N16961_RS04440 PF09115 DNA polymerase III, delta subunit, C terminal N16961_RS04445 PF01026 TatD related DNase N16961_RS04450 PF00367 phosphotransferase system, EIIB N16961_RS04450 PF02378 Phosphotransferase system, EIIC N16961_RS04460 PF00209 Sodium:neurotransmitter symporter family N16961_RS04475 PF01734 Patatin-like phospholipase N16961_RS04480 PF02887 Pyruvate kinase, alpha/beta domain N16961_RS04480 PF00224 Pyruvate kinase, barrel domain N16961_RS04485 PF00480 ROK family N16961_RS04490 PF00072 Response regulator receiver domain N16961_RS04490 PF01584 CheW-like domain N16961_RS04505 PF13847 Methyltransferase domain N16961_RS04525 PF01263 Aldose 1-epimerase N16961_RS04530 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_RS04530 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_RS04535 PF01641 SelR domain N16961_RS04545 PF07023 Protein of unknown function (DUF1315) N16961_RS04550 PF00710 Asparaginase, N-terminal N16961_RS04550 PF17763 Glutaminase/Asparaginase C-terminal domain N16961_RS04555 PF01343 Peptidase family S49 N16961_RS04560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N16961_RS04560 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS04565 PF01842 ACT domain N16961_RS04565 PF00551 Formyl transferase N16961_RS04580 PF04851 Type III restriction enzyme, res subunit N16961_RS04580 PF13307 Helicase C-terminal domain N16961_RS04585 PF00814 Glycoprotease family N16961_RS04600 PF00561 alpha/beta hydrolase fold N16961_RS04605 PF00501 AMP-binding enzyme N16961_RS04605 PF13193 AMP-binding enzyme C-terminal domain N16961_RS04610 PF01612 3'-5' exonuclease N16961_RS04610 PF00570 HRDC domain N16961_RS04630 PF13286 Phosphohydrolase-associated domain N16961_RS04630 PF01966 HD domain N16961_RS04640 PF00155 Aminotransferase class I and II N16961_RS04645 PF00425 chorismate binding enzyme N16961_RS04650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_RS04650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_RS04650 PF16582 Middle domain of thiamine pyrophosphate N16961_RS04655 PF12697 Alpha/beta hydrolase family N16961_RS04660 PF00378 Enoyl-CoA hydratase/isomerase N16961_RS04665 PF13378 Enolase C-terminal domain-like N16961_RS04670 PF00501 AMP-binding enzyme N16961_RS04670 PF13193 AMP-binding enzyme C-terminal domain N16961_RS04675 PF03594 Benzoate membrane transport protein N16961_RS04680 PF07883 Cupin domain N16961_RS04680 PF01381 Helix-turn-helix N16961_RS04685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS04685 PF00672 HAMP domain N16961_RS04685 PF12729 Four helix bundle sensory module for signal transduction N16961_RS04690 PF07690 Major Facilitator Superfamily N16961_RS04710 PF04170 NlpE N-terminal domain N16961_RS04715 PF03776 Septum formation topological specificity factor MinE N16961_RS04720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N16961_RS04725 PF03775 Septum formation inhibitor MinC, C-terminal domain N16961_RS04725 PF05209 Septum formation inhibitor MinC, N-terminal domain N16961_RS04730 PF05166 YcgL domain N16961_RS04735 PF13406 Transglycosylase SLT domain N16961_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS04740 PF03466 LysR substrate binding domain N16961_RS04745 PF07670 Nucleoside recognition N16961_RS04745 PF07662 Na+ dependent nucleoside transporter C-terminus N16961_RS04745 PF01773 Na+ dependent nucleoside transporter N-terminus N16961_RS04750 PF00704 Glycosyl hydrolases family 18 N16961_RS04755 PF03264 NapC/NirT cytochrome c family, N-terminal region N16961_RS04760 PF00384 Molybdopterin oxidoreductase N16961_RS04760 PF18364 Molybdopterin oxidoreductase N-terminal domain N16961_RS04760 PF01568 Molydopterin dinucleotide binding domain N16961_RS04775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS04775 PF03466 LysR substrate binding domain N16961_RS04780 PF01494 FAD binding domain N16961_RS04785 PF02668 Taurine catabolism dioxygenase TauD, TfdA family N16961_RS04790 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain N16961_RS04790 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain N16961_RS04840 PF13188 PAS domain N16961_RS04840 PF03707 Bacterial signalling protein N terminal repeat N16961_RS04840 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS04840 PF00563 EAL domain N16961_RS04855 PF02696 Uncharacterized ACR, YdiU/UPF0061 family N16961_RS04860 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_RS04865 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N16961_RS04870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N16961_RS04875 PF02954 Bacterial regulatory protein, Fis family N16961_RS04875 PF00072 Response regulator receiver domain N16961_RS04875 PF00158 Sigma-54 interaction domain N16961_RS04880 PF02743 Cache domain N16961_RS04880 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS04890 PF05698 Bacterial trigger factor protein (TF) C-terminus N16961_RS04890 PF05697 Bacterial trigger factor protein (TF) N16961_RS04890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_RS04895 PF00574 Clp protease N16961_RS04900 PF06689 ClpX C4-type zinc finger N16961_RS04900 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_RS04900 PF07724 AAA domain (Cdc48 subfamily) N16961_RS04905 PF05362 Lon protease (S16) C-terminal proteolytic domain N16961_RS04905 PF00004 ATPase family associated with various cellular activities (AAA) N16961_RS04905 PF02190 ATP-dependent protease La (LON) substrate-binding domain N16961_RS04910 PF00216 Bacterial DNA-binding protein N16961_RS04915 PF13145 PPIC-type PPIASE domain N16961_RS04925 PF02224 Cytidylate kinase N16961_RS04930 PF00575 S1 RNA binding domain N16961_RS04935 PF00216 Bacterial DNA-binding protein N16961_RS04940 PF06305 Lipopolysaccharide assembly protein A domain N16961_RS04945 PF18073 Rubredoxin metal binding domain N16961_RS04950 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N16961_RS04955 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) N16961_RS04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS04965 PF03466 LysR substrate binding domain N16961_RS04975 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N16961_RS04975 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N16961_RS04980 PF01037 Lrp/AsnC ligand binding domain N16961_RS04985 PF01580 FtsK/SpoIIIE family N16961_RS04985 PF09397 Ftsk gamma domain N16961_RS04985 PF13491 4TM region of DNA translocase FtsK/SpoIIIE N16961_RS04985 PF17854 FtsK alpha domain N16961_RS04990 PF02600 Disulfide bond formation protein DsbB N16961_RS04995 PF06450 Bacterial Na+/H+ antiporter B (NhaB) N16961_RS05000 PF07840 FadR C-terminal domain N16961_RS05000 PF00392 Bacterial regulatory proteins, gntR family N16961_RS05010 PF00672 HAMP domain N16961_RS05010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS05015 PF01230 HIT domain N16961_RS05030 PF13036 Peptidoglycan-synthase activator LpoB N16961_RS05030 PF08139 Prokaryotic membrane lipoprotein lipid attachment site N16961_RS05040 PF05728 Uncharacterised protein family (UPF0227) N16961_RS05045 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS05055 PF12563 Hemolytic toxin N terminal N16961_RS05055 PF07968 Leukocidin/Hemolysin toxin family N16961_RS05055 PF16458 Beta-prism lectin N16961_RS05065 PF03461 TRCF domain N16961_RS05065 PF00271 Helicase conserved C-terminal domain N16961_RS05065 PF00270 DEAD/DEAH box helicase N16961_RS05065 PF02559 CarD-like/TRCF domain N16961_RS05065 PF17757 UvrB interaction domain N16961_RS05075 PF12704 MacB-like periplasmic core domain N16961_RS05075 PF02687 FtsX-like permease family N16961_RS05080 PF00005 ABC transporter N16961_RS05085 PF02687 FtsX-like permease family N16961_RS05085 PF12704 MacB-like periplasmic core domain N16961_RS05095 PF00753 Metallo-beta-lactamase superfamily N16961_RS05095 PF13567 Domain of unknown function (DUF4131) N16961_RS05095 PF03772 Competence protein N16961_RS05100 PF00664 ABC transporter transmembrane region N16961_RS05100 PF00005 ABC transporter N16961_RS05105 PF02606 Tetraacyldisaccharide-1-P 4'-kinase N16961_RS05110 PF03966 Trm112p-like protein N16961_RS05115 PF02348 Cytidylyltransferase N16961_RS05120 PF04293 SpoVR like protein N16961_RS05125 PF04285 Protein of unknown function (DUF444) N16961_RS05130 PF08298 PrkA AAA domain N16961_RS05130 PF06798 PrkA serine protein kinase C-terminal domain N16961_RS05135 PF03887 YfbU domain N16961_RS05145 PF04055 Radical SAM superfamily N16961_RS05150 PF00672 HAMP domain N16961_RS05150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS05150 PF12729 Four helix bundle sensory module for signal transduction N16961_RS05160 PF01228 Glycine radical N16961_RS05160 PF02901 Pyruvate formate lyase-like N16961_RS05175 PF00005 ABC transporter N16961_RS05180 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_RS05185 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS05195 PF03372 Endonuclease/Exonuclease/phosphatase family N16961_RS05200 PF00672 HAMP domain N16961_RS05200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS05205 PF10689 Protein of unknown function (DUF2496) N16961_RS05210 PF07445 Primosomal replication protein priC N16961_RS05215 PF01925 Sulfite exporter TauE/SafE N16961_RS05220 PF13307 Helicase C-terminal domain N16961_RS05220 PF06733 DEAD_2 N16961_RS05225 PF13609 Gram-negative porin N16961_RS05230 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N16961_RS05235 PF02810 SEC-C motif N16961_RS05240 PF00563 EAL domain N16961_RS05240 PF08668 HDOD domain N16961_RS05245 PF00149 Calcineurin-like phosphoesterase N16961_RS05250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD N16961_RS05255 PF09190 DALR domain N16961_RS05255 PF01406 tRNA synthetases class I (C) catalytic domain N16961_RS05260 PF02075 Crossover junction endodeoxyribonuclease RuvC N16961_RS05265 PF01330 RuvA N terminal domain N16961_RS05265 PF07499 RuvA, C-terminal domain N16961_RS05270 PF05496 Holliday junction DNA helicase RuvB P-loop domain N16961_RS05270 PF17864 RuvB AAA lid domain N16961_RS05270 PF05491 RuvB C-terminal winged helix domain N16961_RS05275 PF01654 Cytochrome bd terminal oxidase subunit I N16961_RS05280 PF02322 Cytochrome bd terminal oxidase subunit II N16961_RS05285 PF08173 Membrane bound YbgT-like protein N16961_RS05290 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) N16961_RS05295 PF03061 Thioesterase superfamily N16961_RS05300 PF01618 MotA/TolQ/ExbB proton channel family N16961_RS05305 PF02472 Biopolymer transport protein ExbD/TolR N16961_RS05315 PF04052 TolB amino-terminal domain N16961_RS05315 PF07676 WD40-like Beta Propeller Repeat N16961_RS05320 PF00691 OmpA family N16961_RS05330 PF02445 Quinolinate synthetase A protein N16961_RS05340 PF09308 LuxQ, periplasmic N16961_RS05340 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS05340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS05340 PF00072 Response regulator receiver domain N16961_RS05345 PF06610 L-alanine exporter N16961_RS05350 PF01238 Phosphomannose isomerase type I N16961_RS05355 PF02378 Phosphotransferase system, EIIC N16961_RS05355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_RS05355 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_RS05360 PF12833 Helix-turn-helix domain N16961_RS05370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_RS05390 PF00171 Aldehyde dehydrogenase family N16961_RS05395 PF02954 Bacterial regulatory protein, Fis family N16961_RS05395 PF01590 GAF domain N16961_RS05395 PF00158 Sigma-54 interaction domain N16961_RS05400 PF09905 DNA-binding protein VF530 N16961_RS05410 PF03441 FAD binding domain of DNA photolyase N16961_RS05410 PF00875 DNA photolyase N16961_RS05490 PF00005 ABC transporter N16961_RS05550 PF04002 RadC-like JAB domain N16961_RS05560 PF09264 Vibrio cholerae sialidase, lectin insertion N16961_RS05560 PF13088 BNR repeat-like domain N16961_RS05565 PF01979 Amidohydrolase family N16961_RS05570 PF00480 ROK family N16961_RS05575 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase N16961_RS05585 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_RS05590 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component N16961_RS05595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N16961_RS05600 PF00701 Dihydrodipicolinate synthetase family N16961_RS05605 PF01418 Helix-turn-helix domain, rpiR family N16961_RS05605 PF01380 SIS domain N16961_RS05610 PF01344 Kelch motif N16961_RS05615 PF07646 Kelch motif N16961_RS05635 PF02384 N-6 DNA Methylase N16961_RS05655 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) N16961_RS05655 PF18766 SWI2/SNF2 ATPase N16961_RS05655 PF11867 Domain of unknown function (DUF3387) N16961_RS05675 PF00176 SNF2 family N-terminal domain N16961_RS05675 PF00271 Helicase conserved C-terminal domain N16961_RS05675 PF12419 SNF2 Helicase protein N16961_RS05680 PF00589 Phage integrase family N16961_RS05680 PF13356 Arm DNA-binding domain N16961_RS05685 PF00589 Phage integrase family N16961_RS05685 PF13356 Arm DNA-binding domain N16961_RS05695 PF00873 AcrB/AcrD/AcrF family N16961_RS05700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_RS05710 PF02470 MlaD protein N16961_RS05715 PF04403 Paraquat-inducible protein A N16961_RS05720 PF05552 Conserved TM helix N16961_RS05720 PF00924 Mechanosensitive ion channel N16961_RS05745 PF00440 Bacterial regulatory proteins, tetR family N16961_RS05745 PF08362 YcdC-like protein, C-terminal region N16961_RS05750 PF00171 Aldehyde dehydrogenase family N16961_RS05755 PF07383 Protein of unknown function (DUF1496) N16961_RS05765 PF00440 Bacterial regulatory proteins, tetR family N16961_RS05765 PF16295 Tetracyclin repressor-like, C-terminal domain N16961_RS05770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain N16961_RS05770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain N16961_RS05770 PF09317 Domain of unknown function (DUF1974) N16961_RS05770 PF02770 Acyl-CoA dehydrogenase, middle domain N16961_RS05775 PF12241 Trans-2-enoyl-CoA reductase catalytic region N16961_RS05775 PF07055 Enoyl reductase FAD binding domain N16961_RS05775 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N16961_RS05785 PF01176 Translation initiation factor 1A / IF-1 N16961_RS05790 PF04377 Arginine-tRNA-protein transferase, C terminus N16961_RS05790 PF04376 Arginine-tRNA-protein transferase, N terminus N16961_RS05795 PF03588 Leucyl/phenylalanyl-tRNA protein transferase N16961_RS05805 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) N16961_RS05810 PF10692 Protein of unknown function (DUF2498) N16961_RS05815 PF01396 Topoisomerase DNA binding C4 zinc finger N16961_RS05815 PF08272 Topoisomerase I zinc-ribbon-like N16961_RS05815 PF01131 DNA topoisomerase N16961_RS05815 PF01751 Toprim domain N16961_RS05820 PF00483 Nucleotidyl transferase N16961_RS05825 PF00534 Glycosyl transferases group 1 N16961_RS05825 PF08323 Starch synthase catalytic domain N16961_RS05845 PF04994 TfoX C-terminal domain N16961_RS05845 PF04993 TfoX N-terminal domain N16961_RS05850 PF00356 Bacterial regulatory proteins, lacI family N16961_RS05860 PF02613 Nitrate reductase delta subunit N16961_RS05865 PF00072 Response regulator receiver domain N16961_RS05865 PF00486 Transcriptional regulatory protein, C terminal N16961_RS05870 PF02698 DUF218 domain N16961_RS05875 PF13847 Methyltransferase domain N16961_RS05880 PF17192 MukF middle domain N16961_RS05880 PF17193 MukF C-terminal domain N16961_RS05880 PF03882 MukF winged-helix domain N16961_RS05885 PF04288 MukE-like family N16961_RS05890 PF16330 MukB hinge domain N16961_RS05890 PF04310 MukB N-terminal N16961_RS05895 PF01037 Lrp/AsnC ligand binding domain N16961_RS05900 PF01810 LysE type translocator N16961_RS05905 PF04055 Radical SAM superfamily N16961_RS05905 PF11842 Domain of unknown function (DUF3362) N16961_RS05905 PF08497 Radical SAM N-terminal N16961_RS05910 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS05910 PF08447 PAS fold N16961_RS05910 PF08448 PAS fold N16961_RS05910 PF00563 EAL domain N16961_RS05915 PF05193 Peptidase M16 inactive domain N16961_RS05915 PF00675 Insulinase (Peptidase family M16) N16961_RS05930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS05930 PF03466 LysR substrate binding domain N16961_RS05935 PF01717 Cobalamin-independent synthase, Catalytic domain N16961_RS05935 PF08267 Cobalamin-independent synthase, N-terminal domain N16961_RS05945 PF03795 YCII-related domain N16961_RS05950 PF03061 Thioesterase superfamily N16961_RS05955 PF04279 Intracellular septation protein A N16961_RS05965 PF02698 DUF218 domain N16961_RS05970 PF01370 NAD dependent epimerase/dehydratase family N16961_RS05985 PF01226 Formate/nitrite transporter N16961_RS05995 PF06796 Periplasmic nitrate reductase protein NapE N16961_RS06000 PF03264 NapC/NirT cytochrome c family, N-terminal region N16961_RS06005 PF00384 Molybdopterin oxidoreductase N16961_RS06005 PF01568 Molydopterin dinucleotide binding domain N16961_RS06005 PF18364 Molybdopterin oxidoreductase N-terminal domain N16961_RS06030 PF02833 DHHA2 domain N16961_RS06030 PF01368 DHH family N16961_RS06045 PF00005 ABC transporter N16961_RS06050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_RS06050 PF00005 ABC transporter N16961_RS06055 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS06055 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_RS06060 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS06065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_RS06070 PF00158 Sigma-54 interaction domain N16961_RS06070 PF02954 Bacterial regulatory protein, Fis family N16961_RS06075 PF04012 PspA/IM30 family N16961_RS06090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_RS06090 PF00529 HlyD membrane-fusion protein of T1SS N16961_RS06095 PF13533 Biotin-lipoyl like N16961_RS06100 PF00873 AcrB/AcrD/AcrF family N16961_RS06105 PF03352 Methyladenine glycosylase N16961_RS06110 PF01053 Cys/Met metabolism PLP-dependent enzyme N16961_RS06115 PF13396 Phospholipase_D-nuclease N-terminal N16961_RS06115 PF13091 PLD-like domain N16961_RS06125 PF00209 Sodium:neurotransmitter symporter family N16961_RS06130 PF00849 RNA pseudouridylate synthase N16961_RS06135 PF01066 CDP-alcohol phosphatidyltransferase N16961_RS06140 PF00005 ABC transporter N16961_RS06145 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS06150 PF13416 Bacterial extracellular solute-binding protein N16961_RS06160 PF06945 Protein of unknown function (DUF1289) N16961_RS06175 PF00005 ABC transporter N16961_RS06180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_RS06185 PF03222 Tryptophan/tyrosine permease family N16961_RS06195 PF00571 CBS domain N16961_RS06195 PF01769 Divalent cation transporter N16961_RS06195 PF03448 MgtE intracellular N domain N16961_RS06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS06200 PF00072 Response regulator receiver domain N16961_RS06200 PF09308 LuxQ, periplasmic N16961_RS06200 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS06205 PF00563 EAL domain N16961_RS06205 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS06205 PF03707 Bacterial signalling protein N terminal repeat N16961_RS06215 PF04151 Bacterial pre-peptidase C-terminal domain N16961_RS06215 PF08453 Peptidase family M9 N-terminal N16961_RS06215 PF01752 Collagenase N16961_RS06225 PF12793 Sugar transport-related sRNA regulator N-term N16961_RS06225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_RS06245 PF12729 Four helix bundle sensory module for signal transduction N16961_RS06245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS06245 PF00672 HAMP domain N16961_RS06260 PF01590 GAF domain N16961_RS06260 PF00360 Phytochrome region N16961_RS06260 PF00563 EAL domain N16961_RS06260 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS06265 PF01386 Ribosomal L25p family N16961_RS06270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS06275 PF00486 Transcriptional regulatory protein, C terminal N16961_RS06275 PF00072 Response regulator receiver domain N16961_RS06285 PF00271 Helicase conserved C-terminal domain N16961_RS06285 PF04851 Type III restriction enzyme, res subunit N16961_RS06290 PF01479 S4 domain N16961_RS06290 PF00849 RNA pseudouridylate synthase N16961_RS06295 PF07690 Major Facilitator Superfamily N16961_RS06305 PF13460 NAD(P)H-binding N16961_RS06305 PF11066 Protein of unknown function (DUF2867) N16961_RS06310 PF01554 MatE N16961_RS06315 PF00005 ABC transporter N16961_RS06320 PF02687 FtsX-like permease family N16961_RS06320 PF12704 MacB-like periplasmic core domain N16961_RS06330 PF06965 Na+/H+ antiporter 1 N16961_RS06340 PF00202 Aminotransferase class-III N16961_RS06345 PF03435 Saccharopine dehydrogenase NADP binding domain N16961_RS06345 PF16653 Saccharopine dehydrogenase C-terminal domain N16961_RS06355 PF05736 OprF membrane domain N16961_RS06355 PF00691 OmpA family N16961_RS06360 PF02321 Outer membrane efflux protein N16961_RS06380 PF03466 LysR substrate binding domain N16961_RS06380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS06390 PF01863 Protein of unknown function DUF45 N16961_RS06395 PF05971 RNA methyltransferase N16961_RS06410 PF04204 Homoserine O-succinyltransferase N16961_RS06430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_RS06445 PF00989 PAS fold N16961_RS06445 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain N16961_RS06445 PF17203 Single cache domain 3 N16961_RS06445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS06450 PF00072 Response regulator receiver domain N16961_RS06450 PF12431 Transcriptional regulator N16961_RS06460 PF00072 Response regulator receiver domain N16961_RS06460 PF01584 CheW-like domain N16961_RS06480 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS06480 PF00072 Response regulator receiver domain N16961_RS06500 PF07690 Major Facilitator Superfamily N16961_RS06505 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain N16961_RS06505 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain N16961_RS06510 PF00288 GHMP kinases N terminal domain N16961_RS06510 PF10509 Galactokinase galactose-binding signature N16961_RS06510 PF08544 GHMP kinases C terminal N16961_RS06515 PF01263 Aldose 1-epimerase N16961_RS06520 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS06525 PF00672 HAMP domain N16961_RS06525 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS06525 PF17154 Gammaproteobacterial periplasmic sensor domain N16961_RS06525 PF00563 EAL domain N16961_RS06535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_RS06535 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain N16961_RS06535 PF00205 Thiamine pyrophosphate enzyme, central domain N16961_RS06540 PF03306 Alpha-acetolactate decarboxylase N16961_RS06545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS06545 PF03466 LysR substrate binding domain N16961_RS06555 PF06628 Catalase-related immune-responsive N16961_RS06555 PF00199 Catalase N16961_RS06565 PF00080 Copper/zinc superoxide dismutase (SODC) N16961_RS06570 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) N16961_RS06575 PF00361 Proton-conducting membrane transporter N16961_RS06575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N16961_RS06580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS06580 PF03466 LysR substrate binding domain N16961_RS06585 PF00501 AMP-binding enzyme N16961_RS06585 PF13193 AMP-binding enzyme C-terminal domain N16961_RS06600 PF04266 ASCH domain N16961_RS06615 PF10415 Fumarase C C-terminus N16961_RS06615 PF00206 Lyase N16961_RS06630 PF01654 Cytochrome bd terminal oxidase subunit I N16961_RS06635 PF02322 Cytochrome bd terminal oxidase subunit II N16961_RS06640 PF00005 ABC transporter N16961_RS06640 PF02687 FtsX-like permease family N16961_RS06640 PF12704 MacB-like periplasmic core domain N16961_RS06645 PF12704 MacB-like periplasmic core domain N16961_RS06645 PF02687 FtsX-like permease family N16961_RS06645 PF00005 ABC transporter N16961_RS06650 PF00005 ABC transporter N16961_RS06650 PF12704 MacB-like periplasmic core domain N16961_RS06650 PF02687 FtsX-like permease family N16961_RS06660 PF00529 HlyD membrane-fusion protein of T1SS N16961_RS06670 PF03466 LysR substrate binding domain N16961_RS06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS06675 PF00141 Peroxidase N16961_RS06680 PF00232 Glycosyl hydrolase family 1 N16961_RS06685 PF00356 Bacterial regulatory proteins, lacI family N16961_RS06690 PF01042 Endoribonuclease L-PSP N16961_RS06695 PF04074 YhcH/YjgK/YiaL N16961_RS06700 PF03009 Glycerophosphoryl diester phosphodiesterase family N16961_RS06705 PF00455 DeoR C terminal sensor domain N16961_RS06705 PF08220 DeoR-like helix-turn-helix domain N16961_RS06710 PF00005 ABC transporter N16961_RS06710 PF17912 MalK OB fold domain N16961_RS06715 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS06720 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS06725 PF13416 Bacterial extracellular solute-binding protein N16961_RS06735 PF01618 MotA/TolQ/ExbB proton channel family N16961_RS06740 PF01618 MotA/TolQ/ExbB proton channel family N16961_RS06745 PF02472 Biopolymer transport protein ExbD/TolR N16961_RS06750 PF03544 Gram-negative bacterial TonB protein C-terminal N16961_RS06765 PF01068 ATP dependent DNA ligase domain N16961_RS06765 PF14743 DNA ligase OB-like domain N16961_RS06775 PF01554 MatE N16961_RS06785 PF03881 Fructosamine kinase N16961_RS06795 PF00877 NlpC/P60 family N16961_RS06800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS06800 PF00672 HAMP domain N16961_RS06800 PF02743 Cache domain N16961_RS06810 PF03942 DTW domain N16961_RS06815 PF00480 ROK family N16961_RS06845 PF00994 Probable molybdopterin binding domain N16961_RS06845 PF03454 MoeA C-terminal region (domain IV) N16961_RS06845 PF03453 MoeA N-terminal region (domain I and II) N16961_RS06850 PF12804 MobA-like NTP transferase domain N16961_RS06855 PF08402 TOBE domain N16961_RS06855 PF00005 ABC transporter N16961_RS06860 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS06865 PF12849 PBP superfamily domain N16961_RS06870 PF00072 Response regulator receiver domain N16961_RS06870 PF02954 Bacterial regulatory protein, Fis family N16961_RS06870 PF00158 Sigma-54 interaction domain N16961_RS06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS06875 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS06875 PF00989 PAS fold N16961_RS06880 PF12848 ABC transporter N16961_RS06880 PF00005 ABC transporter N16961_RS06885 PF02634 FdhD/NarQ family N16961_RS06905 PF02613 Nitrate reductase delta subunit N16961_RS06915 PF00384 Molybdopterin oxidoreductase N16961_RS06915 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N16961_RS06915 PF01568 Molydopterin dinucleotide binding domain N16961_RS06920 PF13247 4Fe-4S dicluster domain N16961_RS06935 PF02146 Sir2 family N16961_RS06940 PF04461 Protein of unknown function (DUF520) N16961_RS06945 PF00793 DAHP synthetase I family N16961_RS06960 PF17783 CvfB-like winged helix domain N16961_RS06960 PF13509 S1 domain N16961_RS06965 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF N16961_RS06965 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF N16961_RS06965 PF01189 16S rRNA methyltransferase RsmB/F N16961_RS06970 PF02470 MlaD protein N16961_RS06975 PF04403 Paraquat-inducible protein A N16961_RS06980 PF00664 ABC transporter transmembrane region N16961_RS06980 PF00005 ABC transporter N16961_RS06985 PF13185 GAF domain N16961_RS06990 PF04352 ProQ/FINO family N16961_RS06990 PF17516 ProQ C-terminal domain N16961_RS06995 PF17804 Tail specific protease N-terminal domain N16961_RS06995 PF03572 Peptidase family S41 N16961_RS06995 PF00595 PDZ domain N16961_RS06995 PF11818 C-terminal domain of tail specific protease (DUF3340) N16961_RS07005 PF17432 Domain of unknown function (DUF3458_C) ARM repeats N16961_RS07005 PF11940 Domain of unknown function (DUF3458) Ig-like fold N16961_RS07005 PF01433 Peptidase family M1 domain N16961_RS07015 PF05088 Bacterial NAD-glutamate dehydrogenase N16961_RS07020 PF01180 Dihydroorotate dehydrogenase N16961_RS07025 PF07126 Cell-division protein ZapC N16961_RS07030 PF02926 THUMP domain N16961_RS07030 PF10672 S-adenosylmethionine-dependent methyltransferase N16961_RS07030 PF01170 Putative RNA methylase family UPF0020 N16961_RS07040 PF00005 ABC transporter N16961_RS07040 PF16326 ABC transporter C-terminal domain N16961_RS07040 PF12848 ABC transporter N16961_RS07050 PF04957 Ribosome modulation factor N16961_RS07055 PF07977 FabA-like domain N16961_RS07060 PF13654 AAA domain N16961_RS07060 PF05362 Lon protease (S16) C-terminal proteolytic domain N16961_RS07065 PF17414 MatP C-terminal ribbon-helix-helix domain N16961_RS07065 PF06303 MatP N-terminal domain N16961_RS07160 PF01381 Helix-turn-helix N16961_RS07180 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII N16961_RS07185 PF10734 Protein of unknown function (DUF2523) N16961_RS07190 PF05707 Zonular occludens toxin (Zot) N16961_RS07195 PF01375 Heat-labile enterotoxin alpha chain N16961_RS07200 PF01376 Heat-labile enterotoxin beta chain N16961_RS07210 PF01381 Helix-turn-helix N16961_RS07235 PF01381 Helix-turn-helix N16961_RS07255 PF11713 Peptidase C80 family N16961_RS07255 PF11647 Membrane Localization Domain N16961_RS07255 PF12146 Serine aminopeptidase, S33 N16961_RS07255 PF07634 RtxA repeat N16961_RS07255 PF16671 Actin cross-linking domain N16961_RS07260 PF02794 RTX toxin acyltransferase family N16961_RS07270 PF00005 ABC transporter N16961_RS07270 PF03412 Peptidase C39 family N16961_RS07270 PF00664 ABC transporter transmembrane region N16961_RS07280 PF03412 Peptidase C39 family N16961_RS07280 PF00005 ABC transporter N16961_RS07280 PF00664 ABC transporter transmembrane region N16961_RS07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS07285 PF00072 Response regulator receiver domain N16961_RS07285 PF09308 LuxQ, periplasmic N16961_RS07285 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS07300 PF00115 Cytochrome C and Quinol oxidase polypeptide I N16961_RS07315 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N16961_RS07315 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP N16961_RS07325 PF00403 Heavy-metal-associated domain N16961_RS07340 PF13545 Crp-like helix-turn-helix domain N16961_RS07340 PF00027 Cyclic nucleotide-binding domain N16961_RS07345 PF00582 Universal stress protein family N16961_RS07350 PF01171 PP-loop family N16961_RS07370 PF08402 TOBE domain N16961_RS07370 PF00005 ABC transporter N16961_RS07375 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS07380 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS07385 PF13416 Bacterial extracellular solute-binding protein N16961_RS07390 PF13416 Bacterial extracellular solute-binding protein N16961_RS07405 PF01235 Sodium:alanine symporter family N16961_RS07410 PF01810 LysE type translocator N16961_RS07425 PF01764 Lipase (class 3) N16961_RS07435 PF04717 Type VI secretion system, phage-baseplate injector N16961_RS07435 PF16671 Actin cross-linking domain N16961_RS07440 PF05638 Type VI secretion system effector, Hcp N16961_RS07445 PF02074 Carboxypeptidase Taq (M32) metallopeptidase N16961_RS07450 PF02743 Cache domain N16961_RS07450 PF00672 HAMP domain N16961_RS07450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS07455 PF07690 Major Facilitator Superfamily N16961_RS07460 PF00529 HlyD membrane-fusion protein of T1SS N16961_RS07460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_RS07465 PF02321 Outer membrane efflux protein N16961_RS07475 PF00270 DEAD/DEAH box helicase N16961_RS07475 PF00271 Helicase conserved C-terminal domain N16961_RS07480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS07480 PF13426 PAS domain N16961_RS07480 PF08447 PAS fold N16961_RS07485 PF12729 Four helix bundle sensory module for signal transduction N16961_RS07485 PF00672 HAMP domain N16961_RS07485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS07490 PF00672 HAMP domain N16961_RS07490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS07490 PF17202 Single cache domain 3 N16961_RS07495 PF01584 CheW-like domain N16961_RS07500 PF01339 CheB methylesterase N16961_RS07500 PF00072 Response regulator receiver domain N16961_RS07510 PF03705 CheR methyltransferase, all-alpha domain N16961_RS07510 PF01739 CheR methyltransferase, SAM binding domain N16961_RS07515 PF01584 CheW-like domain N16961_RS07515 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_RS07515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS07515 PF01627 Hpt domain N16961_RS07515 PF00072 Response regulator receiver domain N16961_RS07520 PF01627 Hpt domain N16961_RS07520 PF07194 P2 response regulator binding domain N16961_RS07520 PF01584 CheW-like domain N16961_RS07520 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_RS07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS07530 PF00072 Response regulator receiver domain N16961_RS07535 PF00672 HAMP domain N16961_RS07535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS07540 PF00893 Small Multidrug Resistance protein N16961_RS07545 PF03441 FAD binding domain of DNA photolyase N16961_RS07545 PF00875 DNA photolyase N16961_RS07550 PF07690 Major Facilitator Superfamily N16961_RS07555 PF03466 LysR substrate binding domain N16961_RS07555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS07565 PF03099 Biotin/lipoate A/B protein ligase family N16961_RS07565 PF10437 Bacterial lipoate protein ligase C-terminus N16961_RS07570 PF00012 Hsp70 protein N16961_RS07580 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold N16961_RS07580 PF00271 Helicase conserved C-terminal domain N16961_RS07580 PF11898 Domain of unknown function (DUF3418) N16961_RS07580 PF00270 DEAD/DEAH box helicase N16961_RS07580 PF04408 Helicase associated domain (HA2) N16961_RS07605 PF00563 EAL domain N16961_RS07605 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS07605 PF03707 Bacterial signalling protein N terminal repeat N16961_RS07620 PF00012 Hsp70 protein N16961_RS07625 PF00012 Hsp70 protein N16961_RS07630 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS07630 PF17158 Membrane-associated sensor, integral membrane domain N16961_RS07640 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS07640 PF00563 EAL domain N16961_RS07640 PF03707 Bacterial signalling protein N terminal repeat N16961_RS07660 PF06508 Queuosine biosynthesis protein QueC N16961_RS07665 PF04055 Radical SAM superfamily N16961_RS07680 PF10414 Sirohaem synthase dimerisation region N16961_RS07680 PF14824 Sirohaem biosynthesis protein central N16961_RS07680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N16961_RS07685 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_RS07690 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS07695 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS07700 PF00005 ABC transporter N16961_RS07705 PF01027 Inhibitor of apoptosis-promoting Bax1 N16961_RS07710 PF04358 DsrC like protein N16961_RS07715 PF00708 Acylphosphatase N16961_RS07720 PF10672 S-adenosylmethionine-dependent methyltransferase N16961_RS07720 PF17785 PUA-like domain N16961_RS07725 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS07735 PF08534 Redoxin N16961_RS07735 PF00462 Glutaredoxin N16961_RS07740 PF00072 Response regulator receiver domain N16961_RS07740 PF01627 Hpt domain N16961_RS07740 PF00672 HAMP domain N16961_RS07740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS07740 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS07740 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) N16961_RS07745 PF00072 Response regulator receiver domain N16961_RS07750 PF02798 Glutathione S-transferase, N-terminal domain N16961_RS07750 PF14497 Glutathione S-transferase, C-terminal domain N16961_RS07760 PF04209 homogentisate 1,2-dioxygenase N16961_RS07765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS07770 PF07687 Peptidase dimerisation domain N16961_RS07770 PF01546 Peptidase family M20/M25/M40 N16961_RS07785 PF16177 Acetyl-coenzyme A synthetase N-terminus N16961_RS07785 PF00501 AMP-binding enzyme N16961_RS07785 PF13193 AMP-binding enzyme C-terminal domain N16961_RS07790 PF04303 PrpF protein N16961_RS07795 PF00694 Aconitase C-terminal domain N16961_RS07795 PF00330 Aconitase family (aconitate hydratase) N16961_RS07800 PF00285 Citrate synthase, C-terminal domain N16961_RS07810 PF00392 Bacterial regulatory proteins, gntR family N16961_RS07810 PF07729 FCD domain N16961_RS07825 PF01970 Tripartite tricarboxylate transporter TctA family N16961_RS07840 PF02653 Branched-chain amino acid transport system / permease component N16961_RS07845 PF00005 ABC transporter N16961_RS07850 PF13407 Periplasmic binding protein domain N16961_RS07875 PF00486 Transcriptional regulatory protein, C terminal N16961_RS07875 PF00072 Response regulator receiver domain N16961_RS07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS07880 PF00672 HAMP domain N16961_RS07880 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS07885 PF06629 MltA-interacting protein MipA N16961_RS07890 PF04393 Protein of unknown function (DUF535) N16961_RS07895 PF00072 Response regulator receiver domain N16961_RS07895 PF02954 Bacterial regulatory protein, Fis family N16961_RS07895 PF00158 Sigma-54 interaction domain N16961_RS07900 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_RS07900 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS07905 PF00939 Sodium:sulfate symporter transmembrane region N16961_RS07910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS07910 PF00672 HAMP domain N16961_RS07915 PF00842 Alanine racemase, C-terminal domain N16961_RS07915 PF01168 Alanine racemase, N-terminal domain N16961_RS07920 PF00892 EamA-like transporter family N16961_RS07935 PF13302 Acetyltransferase (GNAT) domain N16961_RS07940 PF18024 Helix-turn-helix domain N16961_RS07940 PF00158 Sigma-54 interaction domain N16961_RS07945 PF05128 Domain of unknown function (DUF697) N16961_RS07950 PF04317 YcjX-like family, DUF463 N16961_RS07965 PF00425 chorismate binding enzyme N16961_RS07965 PF04715 Anthranilate synthase component I, N terminal region N16961_RS07970 PF00293 NUDIX domain N16961_RS07975 PF03222 Tryptophan/tyrosine permease family N16961_RS07980 PF03313 Serine dehydratase alpha chain N16961_RS07980 PF03315 Serine dehydratase beta chain N16961_RS07985 PF01242 6-pyruvoyl tetrahydropterin synthase N16961_RS07990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS07990 PF00672 HAMP domain N16961_RS07995 PF01336 OB-fold nucleic acid binding domain N16961_RS07995 PF00152 tRNA synthetases class II (D, K and N) N16961_RS08000 PF08543 Phosphomethylpyrimidine kinase N16961_RS08005 PF00672 HAMP domain N16961_RS08005 PF01966 HD domain N16961_RS08015 PF00155 Aminotransferase class I and II N16961_RS08030 PF17200 Single Cache domain 2 N16961_RS08030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS08030 PF00672 HAMP domain N16961_RS08035 PF04349 Periplasmic glucan biosynthesis protein, MdoG N16961_RS08040 PF13506 Glycosyl transferase family 21 N16961_RS08045 PF00356 Bacterial regulatory proteins, lacI family N16961_RS08050 PF04794 YdjC-like protein N16961_RS08055 PF02056 Family 4 glycosyl hydrolase N16961_RS08055 PF11975 Family 4 glycosyl hydrolase C-terminal domain N16961_RS08060 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit N16961_RS08065 PF02378 Phosphotransferase system, EIIC N16961_RS08070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_RS08075 PF01522 Polysaccharide deacetylase N16961_RS08080 PF02028 BCCT, betaine/carnitine/choline family transporter N16961_RS08085 PF01047 MarR family N16961_RS08090 PF00072 Response regulator receiver domain N16961_RS08090 PF00196 Bacterial regulatory proteins, luxR family N16961_RS08095 PF17200 Single Cache domain 2 N16961_RS08095 PF07730 Histidine kinase N16961_RS08105 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component N16961_RS08115 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_RS08130 PF00753 Metallo-beta-lactamase superfamily N16961_RS08135 PF05951 Bacterial protein of unknown function (DUF882) N16961_RS08140 PF03734 L,D-transpeptidase catalytic domain N16961_RS08140 PF01471 Putative peptidoglycan binding domain N16961_RS08165 PF00925 GTP cyclohydrolase II N16961_RS08175 PF07690 Major Facilitator Superfamily N16961_RS08185 PF00581 Rhodanese-like domain N16961_RS08185 PF17773 UPF0176 acylphosphatase like domain N16961_RS08190 PF00521 DNA gyrase/topoisomerase IV, subunit A N16961_RS08190 PF03989 DNA gyrase C-terminal domain, beta-propeller N16961_RS08200 PF00317 Ribonucleotide reductase, all-alpha domain N16961_RS08200 PF02867 Ribonucleotide reductase, barrel domain N16961_RS08200 PF03477 ATP cone domain N16961_RS08205 PF00268 Ribonucleotide reductase, small chain N16961_RS08210 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_RS08210 PF00175 Oxidoreductase NAD-binding domain N16961_RS08210 PF00970 Oxidoreductase FAD-binding domain N16961_RS08225 PF00994 Probable molybdopterin binding domain N16961_RS08240 PF00672 HAMP domain N16961_RS08240 PF17200 Single Cache domain 2 N16961_RS08240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS08255 PF00005 ABC transporter N16961_RS08260 PF01032 FecCD transport family N16961_RS08265 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family N16961_RS08275 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase N16961_RS08280 PF02654 Cobalamin-5-phosphate synthase N16961_RS08285 PF02277 Phosphoribosyltransferase N16961_RS08295 PF01641 SelR domain N16961_RS08300 PF00375 Sodium:dicarboxylate symporter family N16961_RS08305 PF00929 Exonuclease N16961_RS08305 PF08411 Exonuclease C-terminal N16961_RS08310 PF03788 LrgA family N16961_RS08315 PF04172 LrgB-like family N16961_RS08320 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_RS08320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_RS08330 PF02222 ATP-grasp domain N16961_RS08340 PF05724 Thiopurine S-methyltransferase (TPMT) N16961_RS08355 PF00216 Bacterial DNA-binding protein N16961_RS08360 PF03147 Ferredoxin-fold anticodon binding domain N16961_RS08360 PF01588 Putative tRNA binding domain N16961_RS08360 PF03484 tRNA synthetase B5 domain N16961_RS08360 PF03483 B3/4 domain N16961_RS08360 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain N16961_RS08365 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain N16961_RS08365 PF01409 tRNA synthetases class II core domain (F) N16961_RS08375 PF00072 Response regulator receiver domain N16961_RS08375 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS08400 PF01066 CDP-alcohol phosphatidyltransferase N16961_RS08405 PF08459 UvrC Helix-hairpin-helix N-terminal N16961_RS08405 PF02151 UvrB/uvrC motif N16961_RS08405 PF01541 GIY-YIG catalytic domain N16961_RS08410 PF00196 Bacterial regulatory proteins, luxR family N16961_RS08410 PF00072 Response regulator receiver domain N16961_RS08415 PF03104 DNA polymerase family B, exonuclease domain N16961_RS08415 PF00136 DNA polymerase family B N16961_RS08420 PF00563 EAL domain N16961_RS08420 PF13426 PAS domain N16961_RS08420 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS08430 PF09285 Elongation factor P, C-terminal N16961_RS08430 PF08207 Elongation factor P (EF-P) KOW-like domain N16961_RS08430 PF01132 Elongation factor P (EF-P) OB domain N16961_RS08435 PF04269 Protein of unknown function, DUF440 N16961_RS08445 PF07702 UTRA domain N16961_RS08445 PF00392 Bacterial regulatory proteins, gntR family N16961_RS08450 PF01979 Amidohydrolase family N16961_RS08455 PF00491 Arginase family N16961_RS08460 PF01175 Urocanase Rossmann-like domain N16961_RS08460 PF17392 Urocanase C-terminal domain N16961_RS08460 PF17391 Urocanase N-terminal domain N16961_RS08465 PF00221 Aromatic amino acid lyase N16961_RS08475 PF00089 Trypsin N16961_RS08480 PF04191 Phospholipid methyltransferase N16961_RS08485 PF01565 FAD binding domain N16961_RS08485 PF02913 FAD linked oxidases, C-terminal domain N16961_RS08485 PF13183 4Fe-4S dicluster domain N16961_RS08500 PF13488 Glycine zipper N16961_RS08500 PF00691 OmpA family N16961_RS08520 PF01259 SAICAR synthetase N16961_RS08530 PF00390 Malic enzyme, N-terminal domain N16961_RS08530 PF03949 Malic enzyme, NAD binding domain N16961_RS08540 PF02698 DUF218 domain N16961_RS08545 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS08545 PF08448 PAS fold N16961_RS08550 PF00266 Aminotransferase class-V N16961_RS08560 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS08565 PF00664 ABC transporter transmembrane region N16961_RS08565 PF00005 ABC transporter N16961_RS08570 PF00005 ABC transporter N16961_RS08570 PF00664 ABC transporter transmembrane region N16961_RS08575 PF00849 RNA pseudouridylate synthase N16961_RS08575 PF01479 S4 domain N16961_RS08580 PF01300 Telomere recombination N16961_RS08585 PF02811 PHP domain N16961_RS08590 PF08056 Tryptophan operon leader peptide N16961_RS08595 PF00425 chorismate binding enzyme N16961_RS08595 PF04715 Anthranilate synthase component I, N terminal region N16961_RS08600 PF00117 Glutamine amidotransferase class-I N16961_RS08605 PF00591 Glycosyl transferase family, a/b domain N16961_RS08605 PF02885 Glycosyl transferase family, helical bundle domain N16961_RS08610 PF00218 Indole-3-glycerol phosphate synthase N16961_RS08610 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase N16961_RS08615 PF00291 Pyridoxal-phosphate dependent enzyme N16961_RS08620 PF00290 Tryptophan synthase alpha chain N16961_RS08625 PF00375 Sodium:dicarboxylate symporter family N16961_RS08630 PF00265 Thymidine kinase N16961_RS08635 PF02938 GAD domain N16961_RS08635 PF00152 tRNA synthetases class II (D, K and N) N16961_RS08635 PF01336 OB-fold nucleic acid binding domain N16961_RS08640 PF01904 Protein of unknown function DUF72 N16961_RS08645 PF13649 Methyltransferase domain N16961_RS08650 PF08003 Protein of unknown function (DUF1698) N16961_RS08670 PF00266 Aminotransferase class-V N16961_RS08680 PF00989 PAS fold N16961_RS08680 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS08695 PF04994 TfoX C-terminal domain N16961_RS08695 PF04993 TfoX N-terminal domain N16961_RS08705 PF03956 Lysine exporter LysO N16961_RS08715 PF00282 Pyridoxal-dependent decarboxylase conserved domain N16961_RS08720 PF01418 Helix-turn-helix domain, rpiR family N16961_RS08720 PF01380 SIS domain N16961_RS08725 PF00465 Iron-containing alcohol dehydrogenase N16961_RS08725 PF00171 Aldehyde dehydrogenase family N16961_RS08730 PF00462 Glutaredoxin N16961_RS08735 PF02080 TrkA-C domain N16961_RS08735 PF06826 Predicted Permease Membrane Region N16961_RS08740 PF17871 AAA lid domain N16961_RS08740 PF00004 ATPase family associated with various cellular activities (AAA) N16961_RS08740 PF07724 AAA domain (Cdc48 subfamily) N16961_RS08740 PF02861 Clp amino terminal domain, pathogenicity island component N16961_RS08740 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_RS08745 PF02617 ATP-dependent Clp protease adaptor protein ClpS N16961_RS08750 PF00313 'Cold-shock' DNA-binding domain N16961_RS08755 PF03971 Monomeric isocitrate dehydrogenase N16961_RS08760 PF00849 RNA pseudouridylate synthase N16961_RS08765 PF01502 Phosphoribosyl-AMP cyclohydrolase N16961_RS08765 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase N16961_RS08770 PF00977 Histidine biosynthesis protein N16961_RS08775 PF00977 Histidine biosynthesis protein N16961_RS08780 PF00117 Glutamine amidotransferase class-I N16961_RS08785 PF08645 Polynucleotide kinase 3 phosphatase N16961_RS08785 PF00475 Imidazoleglycerol-phosphate dehydratase N16961_RS08790 PF00155 Aminotransferase class I and II N16961_RS08795 PF00815 Histidinol dehydrogenase N16961_RS08800 PF01634 ATP phosphoribosyltransferase N16961_RS08800 PF08029 HisG, C-terminal domain N16961_RS08805 PF03553 Na+/H+ antiporter family N16961_RS08810 PF00816 H-NS histone family N16961_RS08815 PF00294 pfkB family carbohydrate kinase N16961_RS08825 PF04356 Protein of unknown function (DUF489) N16961_RS08830 PF08328 Adenylosuccinate lyase C-terminal N16961_RS08830 PF00206 Lyase N16961_RS08840 PF16036 Chalcone isomerase-like N16961_RS08865 PF00106 short chain dehydrogenase N16961_RS08875 PF01435 Peptidase family M48 N16961_RS08890 PF08241 Methyltransferase domain N16961_RS08895 PF00155 Aminotransferase class I and II N16961_RS08900 PF04055 Radical SAM superfamily N16961_RS08900 PF06968 Biotin and Thiamin Synthesis associated domain N16961_RS08905 PF00202 Aminotransferase class-III N16961_RS08910 PF02403 Seryl-tRNA synthetase N-terminal domain N16961_RS08910 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N16961_RS08915 PF12002 MgsA AAA+ ATPase C terminal N16961_RS08915 PF00004 ATPase family associated with various cellular activities (AAA) N16961_RS08915 PF16193 AAA C-terminal domain N16961_RS08920 PF03548 Outer membrane lipoprotein carrier protein LolA N16961_RS08925 PF07516 SecA Wing and Scaffold domain N16961_RS08925 PF01043 SecA preprotein cross-linking domain N16961_RS08925 PF02810 SEC-C motif N16961_RS08925 PF07517 SecA DEAD-like domain N16961_RS08930 PF01207 Dihydrouridine synthase (Dus) N16961_RS08935 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS08940 PF00005 ABC transporter N16961_RS08945 PF02653 Branched-chain amino acid transport system / permease component N16961_RS08955 PF09905 DNA-binding protein VF530 N16961_RS08960 PF04217 Protein of unknown function, DUF412 N16961_RS08965 PF00871 Acetokinase family N16961_RS08970 PF07085 DRTGG domain N16961_RS08970 PF01515 Phosphate acetyl/butaryl transferase N16961_RS08975 PF13409 Glutathione S-transferase, N-terminal domain N16961_RS08980 PF00005 ABC transporter N16961_RS08980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_RS08985 PF00005 ABC transporter N16961_RS08985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_RS08990 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS08990 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS09000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_RS09010 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS09010 PF00072 Response regulator receiver domain N16961_RS09010 PF13188 PAS domain N16961_RS09010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS09010 PF08448 PAS fold N16961_RS09015 PF02954 Bacterial regulatory protein, Fis family N16961_RS09015 PF00072 Response regulator receiver domain N16961_RS09015 PF00158 Sigma-54 interaction domain N16961_RS09020 PF00563 EAL domain N16961_RS09020 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS09020 PF13188 PAS domain N16961_RS09020 PF03707 Bacterial signalling protein N terminal repeat N16961_RS09025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS09025 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS09030 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS09030 PF00989 PAS fold N16961_RS09030 PF13188 PAS domain N16961_RS09030 PF13426 PAS domain N16961_RS09040 PF00072 Response regulator receiver domain N16961_RS09055 PF01300 Telomere recombination N16961_RS09055 PF03481 Putative GTP-binding controlling metal-binding N16961_RS09075 PF01161 Phosphatidylethanolamine-binding protein N16961_RS09085 PF00704 Glycosyl hydrolases family 18 N16961_RS09085 PF06483 Chitinase C N16961_RS09100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_RS09100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_RS09105 PF01022 Bacterial regulatory protein, arsR family N16961_RS09115 PF08448 PAS fold N16961_RS09115 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS09125 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N16961_RS09140 PF01037 Lrp/AsnC ligand binding domain N16961_RS09140 PF13404 AsnC-type helix-turn-helix domain N16961_RS09145 PF00291 Pyridoxal-phosphate dependent enzyme N16961_RS09150 PF08496 Peptidase family S49 N-terminal N16961_RS09150 PF01343 Peptidase family S49 N16961_RS09155 PF00106 short chain dehydrogenase N16961_RS09160 PF03692 Putative zinc- or iron-chelating domain N16961_RS09165 PF03692 Putative zinc- or iron-chelating domain N16961_RS09170 PF13662 Toprim domain N16961_RS09170 PF02132 RecR protein N16961_RS09175 PF02575 YbaB/EbfC DNA-binding family N16961_RS09180 PF12169 DNA polymerase III subunits gamma and tau domain III N16961_RS09180 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding N16961_RS09180 PF12170 DNA polymerase III tau subunit V interacting with alpha N16961_RS09185 PF00156 Phosphoribosyl transferase domain N16961_RS09190 PF04304 Protein of unknown function (DUF454) N16961_RS09200 PF00072 Response regulator receiver domain N16961_RS09205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS09205 PF03466 LysR substrate binding domain N16961_RS09210 PF00881 Nitroreductase family N16961_RS09215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N16961_RS09215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N16961_RS09215 PF00378 Enoyl-CoA hydratase/isomerase N16961_RS09220 PF02803 Thiolase, C-terminal domain N16961_RS09220 PF00108 Thiolase, N-terminal domain N16961_RS09230 PF04542 Sigma-70 region 2 N16961_RS09230 PF08281 Sigma-70, region 4 N16961_RS09240 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N16961_RS09245 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N16961_RS09250 PF01451 Low molecular weight phosphotyrosine protein phosphatase N16961_RS09255 PF12557 Cob(I)alamin adenosyltransferase N terminal N16961_RS09255 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP N16961_RS09260 PF05170 AsmA family N16961_RS09265 PF00485 Phosphoribulokinase / Uridine kinase family N16961_RS09275 PF10609 NUBPL iron-transfer P-loop NTPase N16961_RS09280 PF01588 Putative tRNA binding domain N16961_RS09280 PF09334 tRNA synthetases class I (M) N16961_RS09290 PF01048 Phosphorylase superfamily N16961_RS09295 PF00403 Heavy-metal-associated domain N16961_RS09305 PF01743 Poly A polymerase head domain N16961_RS09305 PF00571 CBS domain N16961_RS09310 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS09310 PF07694 5TMR of 5TMR-LYT N16961_RS09315 PF02391 MoaE protein N16961_RS09320 PF02597 ThiS family N16961_RS09325 PF01967 MoaC family N16961_RS09330 PF00994 Probable molybdopterin binding domain N16961_RS09335 PF06463 Molybdenum Cofactor Synthesis C N16961_RS09335 PF04055 Radical SAM superfamily N16961_RS09340 PF01933 Uncharacterised protein family UPF0052 N16961_RS09345 PF01627 Hpt domain N16961_RS09350 PF00158 Sigma-54 interaction domain N16961_RS09350 PF00072 Response regulator receiver domain N16961_RS09350 PF02954 Bacterial regulatory protein, Fis family N16961_RS09360 PF04851 Type III restriction enzyme, res subunit N16961_RS09360 PF12344 Ultra-violet resistance protein B N16961_RS09360 PF02151 UvrB/uvrC motif N16961_RS09360 PF00271 Helicase conserved C-terminal domain N16961_RS09360 PF17757 UvrB interaction domain N16961_RS09370 PF02508 Rnf-Nqr subunit, membrane protein N16961_RS09375 PF04060 Putative Fe-S cluster N16961_RS09380 PF13375 RnfC Barrel sandwich hybrid domain N16961_RS09380 PF12838 4Fe-4S dicluster domain N16961_RS09380 PF10531 SLBB domain N16961_RS09380 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit N16961_RS09385 PF03116 NQR2, RnfD, RnfE family N16961_RS09390 PF04205 FMN-binding domain N16961_RS09395 PF02508 Rnf-Nqr subunit, membrane protein N16961_RS09400 PF00633 Helix-hairpin-helix motif N16961_RS09400 PF10576 Iron-sulfur binding domain of endonuclease III N16961_RS09400 PF00730 HhH-GPD superfamily base excision DNA repair protein N16961_RS09405 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS09410 PF10952 Protein of unknown function (DUF2753) N16961_RS09415 PF00691 OmpA family N16961_RS09415 PF18393 MotY N-terminal domain N16961_RS09420 PF00929 Exonuclease N16961_RS09425 PF03553 Na+/H+ antiporter family N16961_RS09425 PF13726 Na+-H+ antiporter family N16961_RS09430 PF00156 Phosphoribosyl transferase domain N16961_RS09435 PF02674 Colicin V production protein N16961_RS09440 PF05036 Sporulation related domain N16961_RS09445 PF08245 Mur ligase middle domain N16961_RS09445 PF02875 Mur ligase family, glutamate ligase domain N16961_RS09450 PF17848 Acetyl-coA carboxylase zinc finger domain N16961_RS09450 PF01039 Carboxyl transferase domain N16961_RS09455 PF01416 tRNA pseudouridine synthase N16961_RS09465 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain N16961_RS09465 PF00749 tRNA synthetases class I (E and Q), catalytic domain N16961_RS09470 PF00367 phosphotransferase system, EIIB N16961_RS09470 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N16961_RS09470 PF02378 Phosphotransferase system, EIIC N16961_RS09475 PF01979 Amidohydrolase family N16961_RS09480 PF00480 ROK family N16961_RS09480 PF01047 MarR family N16961_RS09485 PF02254 TrkA-N domain N16961_RS09485 PF00999 Sodium/hydrogen exchanger family N16961_RS09490 PF00733 Asparagine synthase N16961_RS09490 PF13537 Glutamine amidotransferase domain N16961_RS09495 PF02357 Transcription termination factor nusG N16961_RS09500 PF00854 POT family N16961_RS09505 PF00762 Ferrochelatase N16961_RS09510 PF05191 Adenylate kinase, active site lid N16961_RS09515 PF00183 Hsp90 protein N16961_RS09515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS09520 PF00486 Transcriptional regulatory protein, C terminal N16961_RS09525 PF17323 Trans-membrane regulatory protein ToxS N16961_RS09535 PF12850 Calcineurin-like phosphoesterase superfamily domain N16961_RS09540 PF01370 NAD dependent epimerase/dehydratase family N16961_RS09540 PF08338 Domain of unknown function (DUF1731) N16961_RS09545 PF00106 short chain dehydrogenase N16961_RS09555 PF00085 Thioredoxin N16961_RS09565 PF01145 SPFH domain / Band 7 family N16961_RS09565 PF16200 C-terminal region of band_7 N16961_RS09570 PF01957 NfeD-like C-terminal, partner-binding N16961_RS09575 PF13411 MerR HTH family regulatory protein N16961_RS09585 PF13609 Gram-negative porin N16961_RS09595 PF12826 Helix-hairpin-helix motif N16961_RS09595 PF00533 BRCA1 C Terminus (BRCT) domain N16961_RS09595 PF03119 NAD-dependent DNA ligase C4 zinc finger domain N16961_RS09595 PF01653 NAD-dependent DNA ligase adenylation domain N16961_RS09595 PF03120 NAD-dependent DNA ligase OB-fold domain N16961_RS09600 PF04354 ZipA, C-terminal FtsZ-binding domain N16961_RS09610 PF00291 Pyridoxal-phosphate dependent enzyme N16961_RS09620 PF00381 PTS HPr component phosphorylation site N16961_RS09625 PF00391 PEP-utilising enzyme, mobile domain N16961_RS09625 PF02896 PEP-utilising enzyme, TIM barrel domain N16961_RS09625 PF05524 PEP-utilising enzyme, N-terminal N16961_RS09630 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 N16961_RS09635 PF01494 FAD binding domain N16961_RS09640 PF04055 Radical SAM superfamily N16961_RS09640 PF00919 Uncharacterized protein family UPF0004 N16961_RS09640 PF01938 TRAM domain N16961_RS09645 PF02562 PhoH-like protein N16961_RS09650 PF02130 Uncharacterized protein family UPF0054 N16961_RS09655 PF03471 Transporter associated domain N16961_RS09655 PF00571 CBS domain N16961_RS09660 PF00795 Carbon-nitrogen hydrolase N16961_RS09665 PF07295 Zinc-ribbon containing domain N16961_RS09670 PF08264 Anticodon-binding domain of tRNA N16961_RS09670 PF13603 Leucyl-tRNA synthetase, Domain 2 N16961_RS09670 PF00133 tRNA synthetases class I (I, L, M and V) N16961_RS09675 PF04390 Lipopolysaccharide-assembly N16961_RS09680 PF06144 DNA polymerase III, delta subunit N16961_RS09680 PF14840 Processivity clamp loader gamma complex DNA pol III C-term N16961_RS09690 PF02590 Predicted SPOUT methyltransferase N16961_RS09695 PF00905 Penicillin binding protein transpeptidase domain N16961_RS09695 PF03717 Penicillin-binding Protein dimerisation domain N16961_RS09700 PF01098 Cell cycle protein N16961_RS09705 PF05036 Sporulation related domain N16961_RS09705 PF03330 Lytic transglycolase N16961_RS09710 PF00768 D-alanyl-D-alanine carboxypeptidase N16961_RS09710 PF07943 Penicillin-binding protein 5, C-terminal domain N16961_RS09715 PF04359 Protein of unknown function (DUF493) N16961_RS09720 PF03099 Biotin/lipoate A/B protein ligase family N16961_RS09725 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family N16961_RS09725 PF04055 Radical SAM superfamily N16961_RS09735 PF00464 Serine hydroxymethyltransferase N16961_RS09755 PF13807 G-rich domain on putative tyrosine kinase N16961_RS09755 PF13614 AAA domain N16961_RS09755 PF02706 Chain length determinant protein N16961_RS09760 PF18412 Outer-membrane lipoprotein Wza C-terminal domain N16961_RS09760 PF10531 SLBB domain N16961_RS09760 PF02563 Polysaccharide biosynthesis/export protein N16961_RS09770 PF02397 Bacterial sugar transferase N16961_RS09785 PF12561 ToxR activated gene A lipoprotein domain N16961_RS09785 PF17945 Beta/Gamma crystallin N16961_RS09800 PF03808 Glycosyl transferase WecB/TagA/CpsF family N16961_RS09810 PF00862 Sucrose synthase N16961_RS09810 PF00534 Glycosyl transferases group 1 N16961_RS09820 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS09840 PF14602 Hexapeptide repeat of succinyl-transferase N16961_RS09840 PF12464 Maltose acetyltransferase N16961_RS09845 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain N16961_RS09845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N16961_RS09845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N16961_RS09850 PF02350 UDP-N-acetylglucosamine 2-epimerase N16961_RS09855 PF01451 Low molecular weight phosphotyrosine protein phosphatase N16961_RS09860 PF00873 AcrB/AcrD/AcrF family N16961_RS09865 PF13533 Biotin-lipoyl like N16961_RS09890 PF00128 Alpha amylase, catalytic domain N16961_RS09890 PF16657 Maltogenic Amylase, C-terminal domain N16961_RS09895 PF00367 phosphotransferase system, EIIB N16961_RS09895 PF02378 Phosphotransferase system, EIIC N16961_RS09900 PF00356 Bacterial regulatory proteins, lacI family N16961_RS09910 PF00005 ABC transporter N16961_RS09910 PF09383 NIL domain N16961_RS09915 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS09920 PF03180 NLPA lipoprotein N16961_RS09925 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) N16961_RS09930 PF07348 Syd protein (SUKH-2) N16961_RS09935 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term N16961_RS09935 PF14489 QueF-like protein N16961_RS09945 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS09950 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases N16961_RS09950 PF03641 Possible lysine decarboxylase N16961_RS09950 PF11892 Domain of unknown function (DUF3412) N16961_RS09955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain N16961_RS09955 PF01367 5'-3' exonuclease, C-terminal SAM fold N16961_RS09960 PF04241 Protein of unknown function (DUF423) N16961_RS09965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS09965 PF03466 LysR substrate binding domain N16961_RS09970 PF02926 THUMP domain N16961_RS09970 PF02568 Thiamine biosynthesis protein (ThiI) N16961_RS09975 PF00691 OmpA family N16961_RS09975 PF13677 Membrane MotB of proton-channel complex MotA/MotB N16961_RS09980 PF01618 MotA/TolQ/ExbB proton channel family N16961_RS09985 PF02609 Exonuclease VII small subunit N16961_RS09990 PF00348 Polyprenyl synthetase N16961_RS09995 PF02780 Transketolase, C-terminal domain N16961_RS09995 PF13292 1-deoxy-D-xylulose-5-phosphate synthase N16961_RS09995 PF02779 Transketolase, pyrimidine binding domain N16961_RS10000 PF00849 RNA pseudouridylate synthase N16961_RS10005 PF04287 tRNA pseudouridine synthase C N16961_RS10020 PF13302 Acetyltransferase (GNAT) domain N16961_RS10030 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 N16961_RS10035 PF03806 AbgT putative transporter family N16961_RS10040 PF00444 Ribosomal protein L36 N16961_RS10045 PF01197 Ribosomal protein L31 N16961_RS10050 PF01980 tRNA-methyltransferase O N16961_RS10050 PF18389 TrmO C-terminal domain N16961_RS10055 PF03129 Anticodon binding domain N16961_RS10055 PF04073 Aminoacyl-tRNA editing domain N16961_RS10055 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N16961_RS10070 PF06786 Uncharacterised protein family (UPF0253) N16961_RS10080 PF01797 Transposase IS200 like N16961_RS10085 PF02769 AIR synthase related protein, C-terminal domain N16961_RS10085 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal N16961_RS10085 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain N16961_RS10095 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_RS10095 PF01464 Transglycosylase SLT domain N16961_RS10100 PF14437 MafB19-like deaminase N16961_RS10105 PF03806 AbgT putative transporter family N16961_RS10130 PF07963 Prokaryotic N-terminal methylation motif N16961_RS10130 PF14245 Type IV pilin PilA N16961_RS10135 PF00114 Pilin (bacterial filament) N16961_RS10135 PF07963 Prokaryotic N-terminal methylation motif N16961_RS10140 PF00684 DnaJ central domain N16961_RS10140 PF01556 DnaJ C terminal domain N16961_RS10140 PF00226 DnaJ domain N16961_RS10145 PF00012 Hsp70 protein N16961_RS10150 PF01025 GrpE N16961_RS10155 PF01513 ATP-NAD kinase N16961_RS10160 PF02463 RecF/RecN/SMC N terminal domain N16961_RS10165 PF04355 SmpA / OmlA family N16961_RS10170 PF03658 RnfH family Ubiquitin N16961_RS10175 PF03364 Polyketide cyclase / dehydrase and lipid transport N16961_RS10180 PF01668 SmpB protein N16961_RS10190 PF13356 Arm DNA-binding domain N16961_RS10190 PF00589 Phage integrase family N16961_RS10200 PF00589 Phage integrase family N16961_RS10200 PF13356 Arm DNA-binding domain N16961_RS10205 PF13402 Peptidase M60, enhancin and enhancin-like N16961_RS10205 PF13322 Domain of unknown function (DUF4092) N16961_RS10205 PF17291 N-terminal domain of M60-like peptidases N16961_RS10215 PF04225 Opacity-associated protein A LysM-like domain N16961_RS10215 PF01551 Peptidase family M23 N16961_RS10230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS10230 PF02743 Cache domain N16961_RS10230 PF00672 HAMP domain N16961_RS10235 PF01478 Type IV leader peptidase family N16961_RS10235 PF06750 Bacterial Peptidase A24 N-terminal domain N16961_RS10240 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family N16961_RS10245 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F N16961_RS10250 PF00482 Type II secretion system (T2SS), protein F N16961_RS10255 PF00437 Type II/IV secretion system protein N16961_RS10260 PF17456 Toxin-coregulated pilus protein S N16961_RS10280 PF10671 Toxin co-regulated pilus biosynthesis protein Q N16961_RS10290 PF07963 Prokaryotic N-terminal methylation motif N16961_RS10290 PF05946 Toxin-coregulated pilus subunit TcpA N16961_RS10300 PF00486 Transcriptional regulatory protein, C terminal N16961_RS10305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS10310 PF08534 Redoxin N16961_RS10325 PF12561 ToxR activated gene A lipoprotein domain N16961_RS10325 PF00041 Fibronectin type III domain N16961_RS10330 PF00171 Aldehyde dehydrogenase family N16961_RS10400 PF00037 4Fe-4S binding domain N16961_RS10400 PF11953 Domain of unknown function (DUF3470) N16961_RS10405 PF08032 RNA 2'-O ribose methyltransferase substrate binding N16961_RS10405 PF00588 SpoU rRNA Methylase family N16961_RS10415 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase N16961_RS10420 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase N16961_RS10425 PF04223 Citrate lyase, alpha subunit (CitF) N16961_RS10430 PF03328 HpcH/HpaI aldolase/citrate lyase family N16961_RS10435 PF06857 Malonate decarboxylase delta subunit (MdcD) N16961_RS10440 PF08218 Citrate lyase ligase C-terminal domain N16961_RS10445 PF03390 2-hydroxycarboxylate transporter family N16961_RS10450 PF04277 Oxaloacetate decarboxylase, gamma chain N16961_RS10455 PF00364 Biotin-requiring enzyme N16961_RS10455 PF02436 Conserved carboxylase domain N16961_RS10455 PF00682 HMGL-like N16961_RS10460 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N16961_RS10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS10465 PF17203 Single cache domain 3 N16961_RS10470 PF00072 Response regulator receiver domain N16961_RS10470 PF12431 Transcriptional regulator N16961_RS10485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS10485 PF03466 LysR substrate binding domain N16961_RS10490 PF01266 FAD dependent oxidoreductase N16961_RS10495 PF01235 Sodium:alanine symporter family N16961_RS10500 PF00753 Metallo-beta-lactamase superfamily N16961_RS10500 PF14863 Alkyl sulfatase dimerisation N16961_RS10500 PF14864 Alkyl sulfatase C-terminal N16961_RS10505 PF03466 LysR substrate binding domain N16961_RS10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS10510 PF17837 4'-phosphopantetheinyl transferase N-terminal domain N16961_RS10510 PF01648 4'-phosphopantetheinyl transferase superfamily N16961_RS10515 PF00005 ABC transporter N16961_RS10520 PF01032 FecCD transport family N16961_RS10525 PF01032 FecCD transport family N16961_RS10530 PF01497 Periplasmic binding protein N16961_RS10545 PF00425 chorismate binding enzyme N16961_RS10550 PF00501 AMP-binding enzyme N16961_RS10550 PF13193 AMP-binding enzyme C-terminal domain N16961_RS10555 PF00550 Phosphopantetheine attachment site N16961_RS10555 PF00857 Isochorismatase family N16961_RS10560 PF01184 GPR1/FUN34/yaaH family N16961_RS10565 PF06483 Chitinase C N16961_RS10565 PF00704 Glycosyl hydrolases family 18 N16961_RS10570 PF00117 Glutamine amidotransferase class-I N16961_RS10570 PF00958 GMP synthase C terminal domain N16961_RS10570 PF02540 NAD synthase N16961_RS10575 PF00478 IMP dehydrogenase / GMP reductase domain N16961_RS10575 PF00571 CBS domain N16961_RS10580 PF13742 OB-fold nucleic acid binding domain N16961_RS10580 PF02601 Exonuclease VII, large subunit N16961_RS10595 PF01926 50S ribosome-binding GTPase N16961_RS10595 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal N16961_RS10600 PF13360 PQQ-like domain N16961_RS10605 PF09976 Tetratricopeptide repeat-like domain N16961_RS10610 PF03129 Anticodon binding domain N16961_RS10610 PF13393 Histidyl-tRNA synthetase N16961_RS10615 PF04551 GcpE protein N16961_RS10620 PF13464 Domain of unknown function (DUF4115) N16961_RS10625 PF04055 Radical SAM superfamily N16961_RS10630 PF00334 Nucleoside diphosphate kinase N16961_RS10635 PF12404 Peptidase N16961_RS10635 PF00883 Cytosol aminopeptidase family, catalytic domain N16961_RS10640 PF04384 Iron-sulphur cluster assembly N16961_RS10645 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_RS10650 PF00012 Hsp70 protein N16961_RS10655 PF00226 DnaJ domain N16961_RS10655 PF07743 HSCB C-terminal oligomerisation domain N16961_RS10660 PF01521 Iron-sulphur cluster biosynthesis N16961_RS10665 PF01592 NifU-like N terminal domain N16961_RS10670 PF00266 Aminotransferase class-V N16961_RS10675 PF02082 Transcriptional regulator N16961_RS10680 PF00588 SpoU rRNA Methylase family N16961_RS10685 PF00459 Inositol monophosphatase family N16961_RS10690 PF07549 SecD/SecF GG Motif N16961_RS10690 PF02355 Protein export membrane protein N16961_RS10695 PF13721 SecD export protein N-terminal TM region N16961_RS10695 PF02355 Protein export membrane protein N16961_RS10695 PF07549 SecD/SecF GG Motif N16961_RS10700 PF02699 Preprotein translocase subunit N16961_RS10705 PF01702 Queuine tRNA-ribosyltransferase N16961_RS10715 PF02547 Queuosine biosynthesis protein N16961_RS10720 PF00571 CBS domain N16961_RS10725 PF00463 Isocitrate lyase family N16961_RS10730 PF01274 Malate synthase N16961_RS10735 PF03466 LysR substrate binding domain N16961_RS10735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS10740 PF00578 AhpC/TSA family N16961_RS10740 PF10417 C-terminal domain of 1-Cys peroxiredoxin N16961_RS10745 PF03932 CutC family N16961_RS10750 PF03976 Polyphosphate kinase 2 (PPK2) N16961_RS10755 PF01895 PhoU domain N16961_RS10760 PF00005 ABC transporter N16961_RS10765 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS10770 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS10775 PF02503 Polyphosphate kinase middle domain N16961_RS10775 PF13090 Polyphosphate kinase C-terminal domain 2 N16961_RS10775 PF17941 Polyphosphate kinase C-terminal domain 1 N16961_RS10775 PF13089 Polyphosphate kinase N-terminal domain N16961_RS10780 PF02541 Ppx/GppA phosphatase family N16961_RS10785 PF12849 PBP superfamily domain N16961_RS10790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS10790 PF00989 PAS fold N16961_RS10790 PF11808 Phosphate regulon sensor protein PhoR N16961_RS10790 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS10795 PF00486 Transcriptional regulatory protein, C terminal N16961_RS10795 PF00072 Response regulator receiver domain N16961_RS10800 PF04381 Putative exonuclease, RdgC N16961_RS10805 PF16325 Peptidase family U32 C-terminal domain N16961_RS10805 PF01136 Peptidase family U32 N16961_RS10810 PF00037 4Fe-4S binding domain N16961_RS10815 PF00881 Nitroreductase family N16961_RS10850 PF17871 AAA lid domain N16961_RS10850 PF00004 ATPase family associated with various cellular activities (AAA) N16961_RS10850 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_RS10850 PF07724 AAA domain (Cdc48 subfamily) N16961_RS10850 PF02861 Clp amino terminal domain, pathogenicity island component N16961_RS10855 PF02578 Multi-copper polyphenol oxidoreductase laccase N16961_RS10860 PF01479 S4 domain N16961_RS10860 PF00849 RNA pseudouridylate synthase N16961_RS10865 PF13525 Outer membrane lipoprotein N16961_RS10870 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein N16961_RS10875 PF01817 Chorismate mutase type II N16961_RS10875 PF00800 Prephenate dehydratase N16961_RS10880 PF13416 Bacterial extracellular solute-binding protein N16961_RS10885 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS10885 PF00563 EAL domain N16961_RS10890 PF01931 Protein of unknown function DUF84 N16961_RS10895 PF01371 Trp repressor protein N16961_RS10900 PF14718 Soluble lytic murein transglycosylase L domain N16961_RS10900 PF01464 Transglycosylase SLT domain N16961_RS10905 PF12848 ABC transporter N16961_RS10905 PF00005 ABC transporter N16961_RS10910 PF07238 PilZ domain N16961_RS10915 PF01817 Chorismate mutase type II N16961_RS10915 PF02153 Prephenate dehydrogenase N16961_RS10920 PF00793 DAHP synthetase I family N16961_RS10925 PF06580 Histidine kinase N16961_RS10925 PF07694 5TMR of 5TMR-LYT N16961_RS10930 PF00072 Response regulator receiver domain N16961_RS10930 PF04397 LytTr DNA-binding domain N16961_RS10935 PF00933 Glycosyl hydrolase family 3 N terminal domain N16961_RS10940 PF03702 Anhydro-N-acetylmuramic acid kinase N16961_RS10945 PF13580 SIS domain N16961_RS10960 PF02554 Carbon starvation protein CstA N16961_RS10965 PF02401 LytB protein N16961_RS10970 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_RS10975 PF01252 Signal peptidase (SPase) II N16961_RS10980 PF00133 tRNA synthetases class I (I, L, M and V) N16961_RS10980 PF08264 Anticodon-binding domain of tRNA N16961_RS10980 PF06827 Zinc finger found in FPG and IleRS N16961_RS10985 PF01687 Riboflavin kinase N16961_RS10985 PF06574 FAD synthetase N16961_RS10990 PF03023 Lipid II flippase MurJ N16961_RS10995 PF01649 Ribosomal protein S20 N16961_RS11000 PF01022 Bacterial regulatory protein, arsR family N16961_RS11005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS11005 PF03466 LysR substrate binding domain N16961_RS11010 PF02690 Na+/Pi-cotransporter N16961_RS11015 PF00303 Thymidylate synthase N16961_RS11020 PF01790 Prolipoprotein diacylglyceryl transferase N16961_RS11025 PF01925 Sulfite exporter TauE/SafE N16961_RS11030 PF01590 GAF domain N16961_RS11030 PF02896 PEP-utilising enzyme, TIM barrel domain N16961_RS11030 PF00391 PEP-utilising enzyme, mobile domain N16961_RS11030 PF05524 PEP-utilising enzyme, N-terminal N16961_RS11035 PF00293 NUDIX domain N16961_RS11040 PF02976 DNA mismatch repair enzyme MutH N16961_RS11045 PF00248 Aldo/keto reductase family N16961_RS11055 PF00158 Sigma-54 interaction domain N16961_RS11055 PF00072 Response regulator receiver domain N16961_RS11055 PF02954 Bacterial regulatory protein, Fis family N16961_RS11060 PF01336 OB-fold nucleic acid binding domain N16961_RS11060 PF00152 tRNA synthetases class II (D, K and N) N16961_RS11070 PF05525 Branched-chain amino acid transport protein N16961_RS11075 PF05175 Methyltransferase small domain N16961_RS11080 PF00271 Helicase conserved C-terminal domain N16961_RS11080 PF00270 DEAD/DEAH box helicase N16961_RS11085 PF16658 Class II release factor RF3, C-terminal domain N16961_RS11085 PF03144 Elongation factor Tu domain 2 N16961_RS11085 PF00009 Elongation factor Tu GTP binding domain N16961_RS11090 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS11090 PF03707 Bacterial signalling protein N terminal repeat N16961_RS11090 PF00563 EAL domain N16961_RS11105 PF13508 Acetyltransferase (GNAT) domain N16961_RS11110 PF02036 SCP-2 sterol transfer family N16961_RS11115 PF00563 EAL domain N16961_RS11115 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS11115 PF03707 Bacterial signalling protein N terminal repeat N16961_RS11120 PF01136 Peptidase family U32 N16961_RS11125 PF01136 Peptidase family U32 N16961_RS11140 PF13181 Tetratricopeptide repeat N16961_RS11140 PF07719 Tetratricopeptide repeat N16961_RS11145 PF00013 KH domain N16961_RS11145 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain N16961_RS11145 PF01138 3' exoribonuclease family, domain 1 N16961_RS11145 PF00575 S1 RNA binding domain N16961_RS11145 PF03725 3' exoribonuclease family, domain 2 N16961_RS11150 PF00312 Ribosomal protein S15 N16961_RS11155 PF09157 Pseudouridine synthase II TruB, C-terminal N16961_RS11155 PF16198 tRNA pseudouridylate synthase B C-terminal domain N16961_RS11155 PF01509 TruB family pseudouridylate synthase (N terminal domain) N16961_RS11160 PF02033 Ribosome-binding factor A N16961_RS11165 PF00009 Elongation factor Tu GTP binding domain N16961_RS11165 PF11987 Translation-initiation factor 2 N16961_RS11165 PF08364 Bacterial translation initiation factor IF-2 associated region N16961_RS11165 PF04760 Translation initiation factor IF-2, N-terminal region N16961_RS11170 PF13184 NusA-like KH domain N16961_RS11170 PF08529 NusA N-terminal domain N16961_RS11170 PF00575 S1 RNA binding domain N16961_RS11175 PF17384 RimP C-terminal SH3 domain N16961_RS11175 PF02576 RimP N-terminal domain N16961_RS11190 PF03840 Preprotein translocase SecG subunit N16961_RS11200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_RS11200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_RS11200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_RS11200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_RS11205 PF00809 Pterin binding enzyme N16961_RS11210 PF00004 ATPase family associated with various cellular activities (AAA) N16961_RS11210 PF01434 Peptidase family M41 N16961_RS11210 PF06480 FtsH Extracellular N16961_RS11210 PF17862 AAA+ lid domain N16961_RS11215 PF01728 FtsJ-like methyltransferase N16961_RS11220 PF01985 CRS1 / YhbY (CRM) domain N16961_RS11225 PF03449 Transcription elongation factor, N-terminal N16961_RS11225 PF01272 Transcription elongation factor, GreA/GreB, C-term N16961_RS11230 PF13609 Gram-negative porin N16961_RS11235 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family N16961_RS11240 PF00579 tRNA synthetases class I (W and Y) N16961_RS11240 PF01479 S4 domain N16961_RS11245 PF04225 Opacity-associated protein A LysM-like domain N16961_RS11245 PF01551 Peptidase family M23 N16961_RS11250 PF00873 AcrB/AcrD/AcrF family N16961_RS11260 PF01521 Iron-sulphur cluster biosynthesis N16961_RS11265 PF00202 Aminotransferase class-III N16961_RS11270 PF01594 AI-2E family transporter N16961_RS11275 PF05175 Methyltransferase small domain N16961_RS11275 PF08468 Methyltransferase small domain N-terminal N16961_RS11280 PF09308 LuxQ, periplasmic N16961_RS11280 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS11280 PF00072 Response regulator receiver domain N16961_RS11290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_RS11295 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS11300 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_RS11300 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS11305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_RS11305 PF00005 ABC transporter N16961_RS11310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_RS11310 PF00005 ABC transporter N16961_RS11320 PF01869 BadF/BadG/BcrA/BcrD ATPase family N16961_RS11325 PF02838 Glycosyl hydrolase family 20, domain 2 N16961_RS11325 PF00728 Glycosyl hydrolase family 20, catalytic domain N16961_RS11330 PF06165 Glycosyltransferase family 36 N16961_RS11330 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain N16961_RS11335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_RS11335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_RS11335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_RS11335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_RS11340 PF08402 TOBE domain N16961_RS11340 PF00005 ABC transporter N16961_RS11350 PF13416 Bacterial extracellular solute-binding protein N16961_RS11355 PF00909 Ammonium Transporter Family N16961_RS11360 PF00543 Nitrogen regulatory protein P-II N16961_RS11365 PF06062 Uncharacterised protein family (UPF0231) N16961_RS11370 PF00330 Aconitase family (aconitate hydratase) N16961_RS11370 PF06434 Aconitate hydratase 2 N-terminus N16961_RS11370 PF11791 Aconitate B N-terminal domain N16961_RS11375 PF01734 Patatin-like phospholipase N16961_RS11380 PF14814 Bifunctional transglycosylase second domain N16961_RS11380 PF00905 Penicillin binding protein transpeptidase domain N16961_RS11380 PF00912 Transglycosylase N16961_RS11385 PF08482 ATP-dependent helicase C-terminal N16961_RS11385 PF04408 Helicase associated domain (HA2) N16961_RS11385 PF00270 DEAD/DEAH box helicase N16961_RS11385 PF00271 Helicase conserved C-terminal domain N16961_RS11395 PF03749 Sugar fermentation stimulation protein RE domain N16961_RS11395 PF17746 SfsA N-terminal OB domain N16961_RS11400 PF01258 Prokaryotic dksA/traR C4-type zinc finger N16961_RS11405 PF00749 tRNA synthetases class I (E and Q), catalytic domain N16961_RS11410 PF01743 Poly A polymerase head domain N16961_RS11410 PF12626 Polymerase A arginine-rich C-terminus N16961_RS11410 PF12627 Probable RNA and SrmB- binding site of polymerase A N16961_RS11415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N16961_RS11420 PF02548 Ketopantoate hydroxymethyltransferase N16961_RS11425 PF02569 Pantoate-beta-alanine ligase N16961_RS11430 PF01061 ABC-2 type transporter N16961_RS11435 PF00005 ABC transporter N16961_RS11440 PF00916 Sulfate permease family N16961_RS11440 PF01740 STAS domain N16961_RS11445 PF00484 Carbonic anhydrase N16961_RS11450 PF00156 Phosphoribosyl transferase domain N16961_RS11465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases N16961_RS11470 PF04348 LppC putative lipoprotein N16961_RS11475 PF02021 Uncharacterised protein family UPF0102 N16961_RS11480 PF13580 SIS domain N16961_RS11485 PF04972 BON domain N16961_RS11490 PF04386 Stringent starvation protein B N16961_RS11495 PF02798 Glutathione S-transferase, N-terminal domain N16961_RS11495 PF00043 Glutathione S-transferase, C-terminal domain N16961_RS11500 PF02167 Cytochrome C1 family N16961_RS11505 PF00033 Cytochrome b/b6/petB N16961_RS11505 PF00032 Cytochrome b(C-terminal)/b6/petD N16961_RS11510 PF00355 Rieske [2Fe-2S] domain N16961_RS11510 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal N16961_RS11515 PF00380 Ribosomal protein S9/S16 N16961_RS11520 PF00572 Ribosomal protein L13 N16961_RS11525 PF03969 AFG1-like ATPase N16961_RS11535 PF00595 PDZ domain N16961_RS11540 PF13180 PDZ domain N16961_RS11545 PF01245 Ribosomal protein L19 N16961_RS11550 PF01746 tRNA (Guanine-1)-methyltransferase N16961_RS11555 PF01782 RimM N-terminal domain N16961_RS11555 PF05239 PRC-barrel domain N16961_RS11560 PF00886 Ribosomal protein S16 N16961_RS11565 PF00448 SRP54-type protein, GTPase domain N16961_RS11565 PF02881 SRP54-type protein, helical bundle domain N16961_RS11565 PF02978 Signal peptide binding domain N16961_RS11570 PF01578 Cytochrome C assembly protein N16961_RS11575 PF00571 CBS domain N16961_RS11575 PF03471 Transporter associated domain N16961_RS11575 PF01595 Cyclin M transmembrane N-terminal domain N16961_RS11580 PF02664 S-Ribosylhomocysteinase (LuxS) N16961_RS11585 PF04262 Glutamate-cysteine ligase N16961_RS11590 PF00675 Insulinase (Peptidase family M16) N16961_RS11590 PF05193 Peptidase M16 inactive domain N16961_RS11595 PF09335 SNARE associated Golgi protein N16961_RS11600 PF00107 Zinc-binding dehydrogenase N16961_RS11600 PF08240 Alcohol dehydrogenase GroES-like domain N16961_RS11605 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit N16961_RS11610 PF02436 Conserved carboxylase domain N16961_RS11610 PF00364 Biotin-requiring enzyme N16961_RS11610 PF00682 HMGL-like N16961_RS11615 PF04277 Oxaloacetate decarboxylase, gamma chain N16961_RS11660 PF02599 Global regulator protein family N16961_RS11665 PF01842 ACT domain N16961_RS11665 PF13840 ACT domain N16961_RS11665 PF00696 Amino acid kinase family N16961_RS11670 PF01411 tRNA synthetases class II (A) N16961_RS11670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N16961_RS11670 PF02272 DHHA1 domain N16961_RS11675 PF02631 RecX family N16961_RS11680 PF00154 recA bacterial DNA recombination protein N16961_RS11685 PF02464 Competence-damaged protein N16961_RS11690 PF12857 TOBE-like domain N16961_RS11690 PF00005 ABC transporter N16961_RS11695 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS11700 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS11710 PF00291 Pyridoxal-phosphate dependent enzyme N16961_RS11715 PF00488 MutS domain V N16961_RS11715 PF05190 MutS family domain IV N16961_RS11715 PF05192 MutS domain III N16961_RS11715 PF05188 MutS domain II N16961_RS11715 PF01624 MutS domain I N16961_RS11720 PF00140 Sigma-70 factor, region 1.2 N16961_RS11720 PF04542 Sigma-70 region 2 N16961_RS11720 PF04539 Sigma-70 region 3 N16961_RS11720 PF04545 Sigma-70, region 4 N16961_RS11725 PF01476 LysM domain N16961_RS11725 PF01551 Peptidase family M23 N16961_RS11735 PF01975 Survival protein SurE N16961_RS11740 PF01142 tRNA pseudouridine synthase D (TruD) N16961_RS11745 PF02542 YgbB family N16961_RS11750 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase N16961_RS11755 PF04977 Septum formation initiator N16961_RS11760 PF02673 Bacitracin resistance protein BacA N16961_RS11765 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) N16961_RS11770 PF02152 Dihydroneopterin aldolase N16961_RS11780 PF02660 Glycerol-3-phosphate acyltransferase N16961_RS11785 PF00561 alpha/beta hydrolase fold N16961_RS11790 PF00814 Glycoprotease family N16961_RS11795 PF01165 Ribosomal protein S21 N16961_RS11800 PF09424 Yqey-like protein N16961_RS11805 PF08275 DNA primase catalytic core, N-terminal domain N16961_RS11805 PF08278 DNA primase DnaG DnaB-binding N16961_RS11805 PF01807 CHC2 zinc finger N16961_RS11805 PF10410 DnaB-helicase binding domain of primase N16961_RS11810 PF04539 Sigma-70 region 3 N16961_RS11810 PF04546 Sigma-70, non-essential region N16961_RS11810 PF00140 Sigma-70 factor, region 1.2 N16961_RS11810 PF04542 Sigma-70 region 2 N16961_RS11810 PF03979 Sigma-70 factor, region 1.1 N16961_RS11810 PF04545 Sigma-70, region 4 N16961_RS11820 PF13356 Arm DNA-binding domain N16961_RS11820 PF00589 Phage integrase family N16961_RS11825 PF08668 HDOD domain N16961_RS11825 PF00563 EAL domain N16961_RS11830 PF17200 Single Cache domain 2 N16961_RS11830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS11830 PF00672 HAMP domain N16961_RS11835 PF12833 Helix-turn-helix domain N16961_RS11840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS11840 PF08447 PAS fold N16961_RS11850 PF04002 RadC-like JAB domain N16961_RS11885 PF01476 LysM domain N16961_RS11885 PF08525 Opacity-associated protein A N-terminal motif N16961_RS11885 PF01551 Peptidase family M23 N16961_RS11895 PF00114 Pilin (bacterial filament) N16961_RS11895 PF07963 Prokaryotic N-terminal methylation motif N16961_RS11910 PF00075 RNase H N16961_RS11960 PF03480 Bacterial extracellular solute-binding protein, family 7 N16961_RS11965 PF01380 SIS domain N16961_RS11970 PF00455 DeoR C terminal sensor domain N16961_RS11970 PF08220 DeoR-like helix-turn-helix domain N16961_RS11975 PF02887 Pyruvate kinase, alpha/beta domain N16961_RS11975 PF00224 Pyruvate kinase, barrel domain N16961_RS11980 PF04402 Protein of unknown function (DUF541) N16961_RS11985 PF03466 LysR substrate binding domain N16961_RS11985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS11990 PF01810 LysE type translocator N16961_RS11995 PF00924 Mechanosensitive ion channel N16961_RS11995 PF05552 Conserved TM helix N16961_RS12005 PF01116 Fructose-bisphosphate aldolase class-II N16961_RS12010 PF00162 Phosphoglycerate kinase N16961_RS12015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_RS12015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_RS12020 PF00593 TonB dependent receptor N16961_RS12020 PF07715 TonB-dependent Receptor Plug Domain N16961_RS12025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS12025 PF03466 LysR substrate binding domain N16961_RS12030 PF02780 Transketolase, C-terminal domain N16961_RS12030 PF00456 Transketolase, thiamine diphosphate binding domain N16961_RS12030 PF02779 Transketolase, pyrimidine binding domain N16961_RS12035 PF02773 S-adenosylmethionine synthetase, C-terminal domain N16961_RS12035 PF00438 S-adenosylmethionine synthetase, N-terminal domain N16961_RS12035 PF02772 S-adenosylmethionine synthetase, central domain N16961_RS12040 PF10263 SprT-like family N16961_RS12040 PF17283 SprT-like zinc ribbon domain N16961_RS12045 PF04231 Endonuclease I N16961_RS12050 PF04452 RNA methyltransferase N16961_RS12055 PF02951 Prokaryotic glutathione synthetase, N-terminal domain N16961_RS12055 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain N16961_RS12060 PF02622 Uncharacterized ACR, COG1678 N16961_RS12065 PF03652 Holliday junction resolvase N16961_RS12070 PF00579 tRNA synthetases class I (W and Y) N16961_RS12070 PF01479 S4 domain N16961_RS12080 PF00437 Type II/IV secretion system protein N16961_RS12085 PF00437 Type II/IV secretion system protein N16961_RS12090 PF01168 Alanine racemase, N-terminal domain N16961_RS12095 PF03807 NADP oxidoreductase coenzyme F420-dependent N16961_RS12095 PF14748 Pyrroline-5-carboxylate reductase dimerisation N16961_RS12100 PF02325 YGGT family N16961_RS12105 PF02594 Uncharacterised ACR, YggU family COG1872 N16961_RS12115 PF01725 Ham1 family N16961_RS12120 PF06969 HemN C-terminal domain N16961_RS12120 PF04055 Radical SAM superfamily N16961_RS12125 PF04960 Glutaminase N16961_RS12130 PF02390 Putative methyltransferase N16961_RS12135 PF10576 Iron-sulfur binding domain of endonuclease III N16961_RS12135 PF00730 HhH-GPD superfamily base excision DNA repair protein N16961_RS12135 PF14815 NUDIX domain N16961_RS12135 PF00633 Helix-hairpin-helix motif N16961_RS12140 PF04362 Bacterial Fe(2+) trafficking N16961_RS12145 PF01464 Transglycosylase SLT domain N16961_RS12145 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain N16961_RS12170 PF12729 Four helix bundle sensory module for signal transduction N16961_RS12170 PF00672 HAMP domain N16961_RS12170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS12200 PF05099 Tellurite resistance protein TerB N16961_RS12200 PF00226 DnaJ domain N16961_RS12205 PF03968 OstA-like protein N16961_RS12205 PF04453 LPS transport system D N16961_RS12210 PF09312 SurA N-terminal domain N16961_RS12215 PF04166 Pyridoxal phosphate biosynthetic protein PdxA N16961_RS12220 PF00398 Ribosomal RNA adenine dimethylase N16961_RS12225 PF04379 ApaG domain N16961_RS12230 PF00149 Calcineurin-like phosphoesterase N16961_RS12235 PF00186 Dihydrofolate reductase N16961_RS12240 PF12821 Threonine/Serine exporter, ThrE N16961_RS12245 PF06738 Putative threonine/serine exporter N16961_RS12250 PF01018 GTP1/OBG N16961_RS12250 PF01926 50S ribosome-binding GTPase N16961_RS12255 PF01016 Ribosomal L27 protein N16961_RS12260 PF00829 Ribosomal prokaryotic L21 protein N16961_RS12265 PF00348 Polyprenyl synthetase N16961_RS12270 PF13520 Amino acid permease N16961_RS12275 PF00056 lactate/malate dehydrogenase, NAD binding domain N16961_RS12275 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain N16961_RS12280 PF01316 Arginine repressor, DNA binding domain N16961_RS12280 PF02863 Arginine repressor, C-terminal domain N16961_RS12290 PF16868 NMT1-like family N16961_RS12300 PF00582 Universal stress protein family N16961_RS12315 PF06877 Regulator of ribonuclease activity B N16961_RS12325 PF01523 Putative modulator of DNA gyrase N16961_RS12330 PF00795 Carbon-nitrogen hydrolase N16961_RS12335 PF13502 AsmA-like C-terminal region N16961_RS12335 PF13116 Protein of unknown function N16961_RS12340 PF00575 S1 RNA binding domain N16961_RS12340 PF10150 Ribonuclease E/G family N16961_RS12345 PF02545 Maf-like protein N16961_RS12350 PF04093 rod shape-determining protein MreD N16961_RS12355 PF04085 rod shape-determining protein MreC N16961_RS12390 PF07963 Prokaryotic N-terminal methylation motif N16961_RS12395 PF07963 Prokaryotic N-terminal methylation motif N16961_RS12405 PF00482 Type II secretion system (T2SS), protein F N16961_RS12410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain N16961_RS12410 PF00437 Type II/IV secretion system protein N16961_RS12420 PF13401 AAA domain N16961_RS12420 PF01471 Putative peptidoglycan binding domain N16961_RS12425 PF03958 Bacterial type II/III secretion system short domain N16961_RS12425 PF07660 Secretin and TonB N terminus short domain N16961_RS12425 PF11741 AMIN domain N16961_RS12425 PF00263 Bacterial type II and III secretion system protein N16961_RS12445 PF00563 EAL domain N16961_RS12445 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS12445 PF17157 Gammaproteobacterial periplasmic sensor domain N16961_RS12450 PF00436 Single-strand binding protein family N16961_RS12455 PF00196 Bacterial regulatory proteins, luxR family N16961_RS12460 PF00483 Nucleotidyl transferase N16961_RS12465 PF00005 ABC transporter N16961_RS12465 PF17760 UvrA interaction domain N16961_RS12465 PF17755 UvrA DNA-binding domain N16961_RS12475 PF00266 Aminotransferase class-V N16961_RS12480 PF00696 Amino acid kinase family N16961_RS12480 PF01842 ACT domain N16961_RS12485 PF02574 Homocysteine S-methyltransferase N16961_RS12485 PF02607 B12 binding domain N16961_RS12485 PF02310 B12 binding domain N16961_RS12485 PF02965 Vitamin B12 dependent methionine synthase, activation domain N16961_RS12485 PF00809 Pterin binding enzyme N16961_RS12490 PF00999 Sodium/hydrogen exchanger family N16961_RS12580 PF01507 Phosphoadenosine phosphosulfate reductase family N16961_RS12585 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain N16961_RS12585 PF01077 Nitrite and sulphite reductase 4Fe-4S domain N16961_RS12590 PF00667 FAD binding domain N16961_RS12590 PF00258 Flavodoxin N16961_RS12590 PF00175 Oxidoreductase NAD-binding domain N16961_RS12610 PF09583 Phage shock protein G (Phageshock_PspG) N16961_RS12615 PF01207 Dihydrouridine synthase (Dus) N16961_RS12620 PF01475 Ferric uptake regulator family N16961_RS12630 PF12706 Beta-lactamase superfamily domain N16961_RS12635 PF00342 Phosphoglucose isomerase N16961_RS12640 PF01894 Uncharacterised protein family UPF0047 N16961_RS12645 PF01168 Alanine racemase, N-terminal domain N16961_RS12645 PF00842 Alanine racemase, C-terminal domain N16961_RS12650 PF00772 DnaB-like helicase N terminal domain N16961_RS12650 PF03796 DnaB-like helicase C terminal domain N16961_RS12660 PF03948 Ribosomal protein L9, C-terminal domain N16961_RS12660 PF01281 Ribosomal protein L9, N-terminal domain N16961_RS12665 PF01084 Ribosomal protein S18 N16961_RS12670 PF00436 Single-strand binding protein family N16961_RS12675 PF01250 Ribosomal protein S6 N16961_RS12680 PF00210 Ferritin-like domain N16961_RS12685 PF04324 BFD-like [2Fe-2S] binding domain N16961_RS12690 PF03144 Elongation factor Tu domain 2 N16961_RS12690 PF00009 Elongation factor Tu GTP binding domain N16961_RS12690 PF03143 Elongation factor Tu C-terminal domain N16961_RS12695 PF00679 Elongation factor G C-terminus N16961_RS12695 PF03764 Elongation factor G, domain IV N16961_RS12695 PF14492 Elongation Factor G, domain II N16961_RS12695 PF03144 Elongation factor Tu domain 2 N16961_RS12695 PF00009 Elongation factor Tu GTP binding domain N16961_RS12700 PF00177 Ribosomal protein S7p/S5e N16961_RS12705 PF00164 Ribosomal protein S12/S23 N16961_RS12715 PF02635 DsrE/DsrF-like family N16961_RS12720 PF02635 DsrE/DsrF-like family N16961_RS12725 PF08348 YheO-like PAS domain N16961_RS12725 PF13309 HTH domain N16961_RS12730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N16961_RS12730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_RS12740 PF04102 SlyX N16961_RS12745 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) N16961_RS12750 PF01145 SPFH domain / Band 7 family N16961_RS12755 PF12221 Bacterial membrane protein N terminal N16961_RS12755 PF01145 SPFH domain / Band 7 family N16961_RS12760 PF13167 GTP-binding GTPase N-terminal N16961_RS12760 PF01926 50S ribosome-binding GTPase N16961_RS12760 PF16360 GTP-binding GTPase Middle Region N16961_RS12765 PF17209 Hfq protein N16961_RS12775 PF08676 MutL C terminal dimerisation domain N16961_RS12775 PF01119 DNA mismatch repair protein, C-terminal domain N16961_RS12780 PF01520 N-acetylmuramoyl-L-alanine amidase N16961_RS12785 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE N16961_RS12790 PF08331 Domain of unknown function (DUF1730) N16961_RS12835 PF00929 Exonuclease N16961_RS12840 PF03193 RsgA GTPase N16961_RS12845 PF02666 Phosphatidylserine decarboxylase N16961_RS12850 PF02080 TrkA-C domain N16961_RS12850 PF03600 Citrate transporter N16961_RS12860 PF06415 BPG-independent PGAM N-terminus (iPGM_N) N16961_RS12860 PF01676 Metalloenzyme superfamily N16961_RS12865 PF01551 Peptidase family M23 N16961_RS12875 PF08360 QacR-like protein, C-terminal region N16961_RS12875 PF00440 Bacterial regulatory proteins, tetR family N16961_RS12880 PF01208 Uroporphyrinogen decarboxylase (URO-D) N16961_RS12885 PF00293 NUDIX domain N16961_RS12885 PF09297 NADH pyrophosphatase zinc ribbon domain N16961_RS12890 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ N16961_RS12895 PF05000 RNA polymerase Rpb1, domain 4 N16961_RS12895 PF04998 RNA polymerase Rpb1, domain 5 N16961_RS12895 PF00623 RNA polymerase Rpb1, domain 2 N16961_RS12895 PF04983 RNA polymerase Rpb1, domain 3 N16961_RS12895 PF04997 RNA polymerase Rpb1, domain 1 N16961_RS12900 PF04560 RNA polymerase Rpb2, domain 7 N16961_RS12900 PF10385 RNA polymerase beta subunit external 1 domain N16961_RS12900 PF00562 RNA polymerase Rpb2, domain 6 N16961_RS12900 PF04565 RNA polymerase Rpb2, domain 3 N16961_RS12900 PF04563 RNA polymerase beta subunit N16961_RS12900 PF04561 RNA polymerase Rpb2, domain 2 N16961_RS12905 PF16320 Ribosomal protein L7/L12 dimerisation domain N16961_RS12905 PF00542 Ribosomal protein L7/L12 C-terminal domain N16961_RS12910 PF00466 Ribosomal protein L10 N16961_RS12915 PF00687 Ribosomal protein L1p/L10e family N16961_RS12920 PF00298 Ribosomal protein L11, RNA binding domain N16961_RS12920 PF03946 Ribosomal protein L11, N-terminal domain N16961_RS12925 PF00467 KOW motif N16961_RS12925 PF02357 Transcription termination factor nusG N16961_RS12930 PF00584 SecE/Sec61-gamma subunits of protein translocation complex N16961_RS12935 PF00009 Elongation factor Tu GTP binding domain N16961_RS12935 PF03144 Elongation factor Tu domain 2 N16961_RS12935 PF03143 Elongation factor Tu C-terminal domain N16961_RS12960 PF00485 Phosphoribulokinase / Uridine kinase family N16961_RS12965 PF02237 Biotin protein ligase C terminal domain N16961_RS12965 PF08279 HTH domain N16961_RS12965 PF03099 Biotin/lipoate A/B protein ligase family N16961_RS12970 PF01565 FAD binding domain N16961_RS12970 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain N16961_RS12980 PF13091 PLD-like domain N16961_RS13015 PF00175 Oxidoreductase NAD-binding domain N16961_RS13020 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_RS13020 PF00970 Oxidoreductase FAD-binding domain N16961_RS13020 PF00175 Oxidoreductase NAD-binding domain N16961_RS13025 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase N16961_RS13035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_RS13035 PF07498 Rho termination factor, N-terminal domain N16961_RS13035 PF07497 Rho termination factor, RNA-binding domain N16961_RS13040 PF00085 Thioredoxin N16961_RS13045 PF00271 Helicase conserved C-terminal domain N16961_RS13045 PF00270 DEAD/DEAH box helicase N16961_RS13050 PF02541 Ppx/GppA phosphatase family N16961_RS13055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS13055 PF00072 Response regulator receiver domain N16961_RS13055 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS13055 PF09456 RcsC Alpha-Beta-Loop (ABL) N16961_RS13060 PF12832 MFS_1 like family N16961_RS13080 PF13193 AMP-binding enzyme C-terminal domain N16961_RS13080 PF16177 Acetyl-coenzyme A synthetase N-terminus N16961_RS13080 PF00501 AMP-binding enzyme N16961_RS13085 PF01220 Dehydroquinase class II N16961_RS13090 PF00364 Biotin-requiring enzyme N16961_RS13095 PF02785 Biotin carboxylase C-terminal domain N16961_RS13095 PF00289 Biotin carboxylase, N-terminal domain N16961_RS13095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain N16961_RS13105 PF01207 Dihydrouridine synthase (Dus) N16961_RS13110 PF02954 Bacterial regulatory protein, Fis family N16961_RS13115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N16961_RS13115 PF00356 Bacterial regulatory proteins, lacI family N16961_RS13120 PF00920 Dehydratase family N16961_RS13125 PF01202 Shikimate kinase N16961_RS13130 PF02447 GntP family permease N16961_RS13135 PF01081 KDPG and KHG aldolase N16961_RS13140 PF00593 TonB dependent receptor N16961_RS13140 PF07715 TonB-dependent Receptor Plug Domain N16961_RS13155 PF17200 Single Cache domain 2 N16961_RS13155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS13155 PF00672 HAMP domain N16961_RS13160 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N16961_RS13160 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N16961_RS13160 PF01276 Orn/Lys/Arg decarboxylase, major domain N16961_RS13165 PF13520 Amino acid permease N16961_RS13170 PF18500 CadC C-terminal domain 1 N16961_RS13170 PF00486 Transcriptional regulatory protein, C terminal N16961_RS13175 PF13411 MerR HTH family regulatory protein N16961_RS13185 PF01808 AICARFT/IMPCHase bienzyme N16961_RS13185 PF02142 MGS-like domain N16961_RS13190 PF02843 Phosphoribosylglycinamide synthetase, C domain N16961_RS13190 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain N16961_RS13190 PF02844 Phosphoribosylglycinamide synthetase, N domain N16961_RS13200 PF00216 Bacterial DNA-binding protein N16961_RS13205 PF00571 CBS domain N16961_RS13205 PF01595 Cyclin M transmembrane N-terminal domain N16961_RS13210 PF00480 ROK family N16961_RS13215 PF01238 Phosphomannose isomerase type I N16961_RS13220 PF04222 Protein of unknown function (DUF416) N16961_RS13225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_RS13230 PF03167 Uracil DNA glycosylase superfamily N16961_RS13235 PF00924 Mechanosensitive ion channel N16961_RS13240 PF10996 Beta-Casp domain N16961_RS13240 PF00753 Metallo-beta-lactamase superfamily N16961_RS13240 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain N16961_RS13245 PF02397 Bacterial sugar transferase N16961_RS13250 PF01370 NAD dependent epimerase/dehydratase family N16961_RS13255 PF02719 Polysaccharide biosynthesis protein N16961_RS13295 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS13305 PF00171 Aldehyde dehydrogenase family N16961_RS13305 PF00465 Iron-containing alcohol dehydrogenase N16961_RS13310 PF13193 AMP-binding enzyme C-terminal domain N16961_RS13310 PF00501 AMP-binding enzyme N16961_RS13320 PF00005 ABC transporter N16961_RS13320 PF14524 Wzt C-terminal domain N16961_RS13335 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family N16961_RS13340 PF16363 GDP-mannose 4,6 dehydratase N16961_RS13345 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_RS13345 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_RS13345 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_RS13345 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_RS13350 PF00483 Nucleotidyl transferase N16961_RS13350 PF01050 Mannose-6-phosphate isomerase N16961_RS13355 PF01370 NAD dependent epimerase/dehydratase family N16961_RS13360 PF00457 Glycosyl hydrolases family 11 N16961_RS13360 PF01522 Polysaccharide deacetylase N16961_RS13375 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_RS13385 PF04488 Glycosyltransferase sugar-binding region containing DXD motif N16961_RS13390 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) N16961_RS13425 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_RS13430 PF00535 Glycosyl transferase family 2 N16961_RS13435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) N16961_RS13440 PF01467 Cytidylyltransferase-like N16961_RS13445 PF06827 Zinc finger found in FPG and IleRS N16961_RS13445 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain N16961_RS13445 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain N16961_RS13455 PF00471 Ribosomal protein L33 N16961_RS13460 PF00830 Ribosomal L28 family N16961_RS13465 PF04002 RadC-like JAB domain N16961_RS13470 PF00672 HAMP domain N16961_RS13470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS13475 PF04127 DNA / pantothenate metabolism flavoprotein N16961_RS13475 PF02441 Flavoprotein N16961_RS13485 PF00440 Bacterial regulatory proteins, tetR family N16961_RS13490 PF03279 Bacterial lipid A biosynthesis acyltransferase N16961_RS13495 PF03279 Bacterial lipid A biosynthesis acyltransferase N16961_RS13500 PF00156 Phosphoribosyl transferase domain N16961_RS13505 PF03725 3' exoribonuclease family, domain 2 N16961_RS13505 PF01138 3' exoribonuclease family, domain 1 N16961_RS13510 PF03755 YicC-like family, N-terminal region N16961_RS13510 PF08340 Domain of unknown function (DUF1732) N16961_RS13515 PF03350 Uncharacterized protein family, UPF0114 N16961_RS13520 PF02378 Phosphotransferase system, EIIC N16961_RS13520 PF00367 phosphotransferase system, EIIB N16961_RS13525 PF13580 SIS domain N16961_RS13535 PF01418 Helix-turn-helix domain, rpiR family N16961_RS13535 PF01380 SIS domain N16961_RS13540 PF01032 FecCD transport family N16961_RS13545 PF01497 Periplasmic binding protein N16961_RS13550 PF00005 ABC transporter N16961_RS13555 PF00593 TonB dependent receptor N16961_RS13555 PF07715 TonB-dependent Receptor Plug Domain N16961_RS13560 PF00664 ABC transporter transmembrane region N16961_RS13560 PF00005 ABC transporter N16961_RS13575 PF00271 Helicase conserved C-terminal domain N16961_RS13575 PF00270 DEAD/DEAH box helicase N16961_RS13575 PF16124 RecQ zinc-binding N16961_RS13575 PF09382 RQC domain N16961_RS13575 PF00570 HRDC domain N16961_RS13580 PF00892 EamA-like transporter family N16961_RS13590 PF12833 Helix-turn-helix domain N16961_RS13595 PF01810 LysE type translocator N16961_RS13610 PF13361 UvrD-like helicase C-terminal domain N16961_RS13610 PF00580 UvrD/REP helicase N-terminal domain N16961_RS13615 PF01432 Peptidase family M3 N16961_RS13620 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ N16961_RS13625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_RS13625 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS13665 PF01734 Patatin-like phospholipase N16961_RS13690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_RS13700 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_RS13700 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS13705 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS13710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_RS13715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_RS13715 PF00005 ABC transporter N16961_RS13755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III N16961_RS13760 PF00580 UvrD/REP helicase N-terminal domain N16961_RS13760 PF13361 UvrD-like helicase C-terminal domain N16961_RS13765 PF00440 Bacterial regulatory proteins, tetR family N16961_RS13770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_RS13775 PF00873 AcrB/AcrD/AcrF family N16961_RS13780 PF04380 Membrane fusogenic activity N16961_RS13785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain N16961_RS13785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain N16961_RS13790 PF03466 LysR substrate binding domain N16961_RS13790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS13835 PF12724 Flavodoxin domain N16961_RS13840 PF02386 Cation transport protein N16961_RS13845 PF01205 Uncharacterized protein family UPF0029 N16961_RS13845 PF09186 Domain of unknown function (DUF1949) N16961_RS13850 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain N16961_RS13850 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain N16961_RS13850 PF00378 Enoyl-CoA hydratase/isomerase N16961_RS13855 PF00108 Thiolase, N-terminal domain N16961_RS13855 PF02803 Thiolase, C-terminal domain N16961_RS13860 PF03466 LysR substrate binding domain N16961_RS13860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS13865 PF07690 Major Facilitator Superfamily N16961_RS13870 PF12804 MobA-like NTP transferase domain N16961_RS13870 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS13875 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain N16961_RS13875 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain N16961_RS13880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_RS13880 PF02874 ATP synthase alpha/beta family, beta-barrel domain N16961_RS13885 PF00231 ATP synthase N16961_RS13890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain N16961_RS13890 PF00306 ATP synthase alpha/beta chain, C terminal domain N16961_RS13890 PF02874 ATP synthase alpha/beta family, beta-barrel domain N16961_RS13895 PF00213 ATP synthase delta (OSCP) subunit N16961_RS13900 PF00430 ATP synthase B/B' CF(0) N16961_RS13905 PF00137 ATP synthase subunit C N16961_RS13910 PF00119 ATP synthase A chain N16961_RS13915 PF03899 ATP synthase I chain N16961_RS13920 PF17762 HTH domain found in ParB protein N16961_RS13920 PF02195 ParB-like nuclease domain N16961_RS13925 PF13614 AAA domain N16961_RS13930 PF02527 rRNA small subunit methyltransferase G N16961_RS13935 PF13932 GidA associated domain N16961_RS13935 PF01134 Glucose inhibited division protein A N16961_RS13945 PF00258 Flavodoxin N16961_RS13950 PF10396 GTP-binding protein TrmE N-terminus N16961_RS13950 PF01926 50S ribosome-binding GTPase N16961_RS13950 PF12631 MnmE helical domain N16961_RS13955 PF14849 YidC periplasmic domain N16961_RS13955 PF02096 60Kd inner membrane protein N16961_RS13960 PF01809 Putative membrane protein insertion efficiency factor N16961_RS13965 PF00825 Ribonuclease P N16961_RS13970 PF00468 Ribosomal protein L34 N16961_RS13975 PF00005 ABC transporter N16961_RS13980 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS13985 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_RS13995 PF18607 ParA helix turn helix domain N16961_RS13995 PF13614 AAA domain N16961_RS14025 PF01709 Transcriptional regulator N16961_RS14030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase N16961_RS14030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N16961_RS14035 PF00672 HAMP domain N16961_RS14035 PF17200 Single Cache domain 2 N16961_RS14035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS14045 PF10928 Protein of unknown function (DUF2810) N16961_RS14050 PF17874 MalT-like TPR region N16961_RS14050 PF00196 Bacterial regulatory proteins, luxR family N16961_RS14055 PF00343 Carbohydrate phosphorylase N16961_RS14060 PF02446 4-alpha-glucanotransferase N16961_RS14065 PF02806 Alpha amylase, C-terminal all-beta domain N16961_RS14065 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N16961_RS14065 PF00128 Alpha amylase, catalytic domain N16961_RS14075 PF05638 Type VI secretion system effector, Hcp N16961_RS14080 PF04717 Type VI secretion system, phage-baseplate injector N16961_RS14085 PF13503 Domain of unknown function (DUF4123) N16961_RS14105 PF01168 Alanine racemase, N-terminal domain N16961_RS14105 PF00842 Alanine racemase, C-terminal domain N16961_RS14105 PF01757 Acyltransferase family N16961_RS14115 PF00939 Sodium:sulfate symporter transmembrane region N16961_RS14120 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) N16961_RS14125 PF00704 Glycosyl hydrolases family 18 N16961_RS14125 PF08329 Chitinase A, N-terminal domain N16961_RS14145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS14145 PF00672 HAMP domain N16961_RS14145 PF02743 Cache domain N16961_RS14165 PF01569 PAP2 superfamily N16961_RS14170 PF00375 Sodium:dicarboxylate symporter family N16961_RS14180 PF02630 SCO1/SenC N16961_RS14195 PF03616 Sodium/glutamate symporter N16961_RS14200 PF12945 Flagellar protein YcgR N16961_RS14200 PF07238 PilZ domain N16961_RS14215 PF00529 HlyD membrane-fusion protein of T1SS N16961_RS14215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion N16961_RS14220 PF11742 Protein of unknown function (DUF3302) N16961_RS14225 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS14240 PF01048 Phosphorylase superfamily N16961_RS14250 PF08349 Protein of unknown function (DUF1722) N16961_RS14255 PF13411 MerR HTH family regulatory protein N16961_RS14260 PF00875 DNA photolyase N16961_RS14260 PF03441 FAD binding domain of DNA photolyase N16961_RS14265 PF03734 L,D-transpeptidase catalytic domain N16961_RS14265 PF17969 L,D-transpeptidase C-terminal domain N16961_RS14265 PF01476 LysM domain N16961_RS14275 PF00270 DEAD/DEAH box helicase N16961_RS14275 PF00271 Helicase conserved C-terminal domain N16961_RS14280 PF00326 Prolyl oligopeptidase family N16961_RS14280 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain N16961_RS14285 PF07715 TonB-dependent Receptor Plug Domain N16961_RS14285 PF00593 TonB dependent receptor N16961_RS14305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS14305 PF00672 HAMP domain N16961_RS14305 PF12729 Four helix bundle sensory module for signal transduction N16961_RS14310 PF12849 PBP superfamily domain N16961_RS14315 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS14320 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS14325 PF00005 ABC transporter N16961_RS14330 PF00563 EAL domain N16961_RS14330 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS14330 PF03707 Bacterial signalling protein N terminal repeat N16961_RS14345 PF07670 Nucleoside recognition N16961_RS14350 PF01740 STAS domain N16961_RS14350 PF00916 Sulfate permease family N16961_RS14360 PF01551 Peptidase family M23 N16961_RS14360 PF08525 Opacity-associated protein A N-terminal motif N16961_RS14360 PF01476 LysM domain N16961_RS14365 PF13188 PAS domain N16961_RS14365 PF03707 Bacterial signalling protein N terminal repeat N16961_RS14365 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS14365 PF00563 EAL domain N16961_RS14370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS14370 PF03466 LysR substrate binding domain N16961_RS14375 PF07690 Major Facilitator Superfamily N16961_RS14380 PF09278 MerR, DNA binding N16961_RS14380 PF00376 MerR family regulatory protein N16961_RS14400 PF00375 Sodium:dicarboxylate symporter family N16961_RS14410 PF02001 Protein of unknown function DUF134 N16961_RS14430 PF02868 Thermolysin metallopeptidase, alpha-helical domain N16961_RS14430 PF01483 Proprotein convertase P-domain N16961_RS14430 PF01447 Thermolysin metallopeptidase, catalytic domain N16961_RS14430 PF07504 Fungalysin/Thermolysin Propeptide Motif N16961_RS14445 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain N16961_RS14445 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family N16961_RS14450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N16961_RS14450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain N16961_RS14455 PF00581 Rhodanese-like domain N16961_RS14460 PF00196 Bacterial regulatory proteins, luxR family N16961_RS14460 PF00563 EAL domain N16961_RS14465 PF13419 Haloacid dehalogenase-like hydrolase N16961_RS14470 PF00916 Sulfate permease family N16961_RS14470 PF01740 STAS domain N16961_RS14475 PF00849 RNA pseudouridylate synthase N16961_RS14495 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath N16961_RS14505 PF05947 Type VI secretion system, TssF N16961_RS14525 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE N16961_RS14535 PF07724 AAA domain (Cdc48 subfamily) N16961_RS14535 PF00004 ATPase family associated with various cellular activities (AAA) N16961_RS14535 PF17871 AAA lid domain N16961_RS14535 PF10431 C-terminal, D2-small domain, of ClpB protein N16961_RS14540 PF00158 Sigma-54 interaction domain N16961_RS14540 PF02954 Bacterial regulatory protein, Fis family N16961_RS14555 PF06744 Type VI secretion protein IcmF C-terminal N16961_RS14555 PF14331 ImcF-related N-terminal domain N16961_RS14555 PF06761 Intracellular multiplication and human macrophage-killing N16961_RS14570 PF01471 Putative peptidoglycan binding domain N16961_RS14570 PF04717 Type VI secretion system, phage-baseplate injector N16961_RS14585 PF05025 RbsD / FucU transport protein family N16961_RS14590 PF00005 ABC transporter N16961_RS14595 PF02653 Branched-chain amino acid transport system / permease component N16961_RS14600 PF13407 Periplasmic binding protein domain N16961_RS14605 PF00294 pfkB family carbohydrate kinase N16961_RS14610 PF00356 Bacterial regulatory proteins, lacI family N16961_RS14615 PF04973 Nicotinamide mononucleotide transporter N16961_RS14620 PF04973 Nicotinamide mononucleotide transporter N16961_RS14625 PF01048 Phosphorylase superfamily N16961_RS14635 PF03009 Glycerophosphoryl diester phosphodiesterase family N16961_RS14640 PF07690 Major Facilitator Superfamily N16961_RS14655 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS14655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS14655 PF02743 Cache domain N16961_RS14660 PF02954 Bacterial regulatory protein, Fis family N16961_RS14660 PF00158 Sigma-54 interaction domain N16961_RS14660 PF00072 Response regulator receiver domain N16961_RS14680 PF01266 FAD dependent oxidoreductase N16961_RS14685 PF12561 ToxR activated gene A lipoprotein domain N16961_RS14685 PF00041 Fibronectin type III domain N16961_RS14690 PF01327 Polypeptide deformylase N16961_RS14700 PF03334 Na+/H+ antiporter subunit N16961_RS14705 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) N16961_RS14710 PF01899 Na+/H+ ion antiporter subunit N16961_RS14715 PF00361 Proton-conducting membrane transporter N16961_RS14720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L N16961_RS14725 PF13244 Domain of unknown function (DUF4040) N16961_RS14725 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter N16961_RS14725 PF00361 Proton-conducting membrane transporter N16961_RS14725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus N16961_RS14735 PF00582 Universal stress protein family N16961_RS14740 PF03222 Tryptophan/tyrosine permease family N16961_RS14745 PF01212 Beta-eliminating lyase N16961_RS14755 PF12843 Putative quorum-sensing-regulated virulence factor N16961_RS14765 PF08448 PAS fold N16961_RS14765 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS14765 PF00563 EAL domain N16961_RS14770 PF00313 'Cold-shock' DNA-binding domain N16961_RS14785 PF13519 von Willebrand factor type A domain N16961_RS14785 PF07584 Aerotolerance regulator N-terminal N16961_RS14800 PF01882 Protein of unknown function DUF58 N16961_RS14805 PF07726 ATPase family associated with various cellular activities (AAA) N16961_RS14805 PF17863 AAA lid domain N16961_RS14810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS14810 PF00672 HAMP domain N16961_RS14810 PF02743 Cache domain N16961_RS14825 PF01773 Na+ dependent nucleoside transporter N-terminus N16961_RS14825 PF07670 Nucleoside recognition N16961_RS14825 PF07662 Na+ dependent nucleoside transporter C-terminus N16961_RS14830 PF01546 Peptidase family M20/M25/M40 N16961_RS14830 PF07687 Peptidase dimerisation domain N16961_RS14840 PF01590 GAF domain N16961_RS14840 PF00158 Sigma-54 interaction domain N16961_RS14845 PF00175 Oxidoreductase NAD-binding domain N16961_RS14845 PF00042 Globin N16961_RS14845 PF00970 Oxidoreductase FAD-binding domain N16961_RS14850 PF00313 'Cold-shock' DNA-binding domain N16961_RS14855 PF03889 Alternative ribosome-rescue factor A N16961_RS14870 PF00072 Response regulator receiver domain N16961_RS14880 PF03853 YjeF-related protein N-terminus N16961_RS14880 PF01256 Carbohydrate kinase N16961_RS14885 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_RS14885 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_RS14895 PF07885 Ion channel N16961_RS14910 PF00478 IMP dehydrogenase / GMP reductase domain N16961_RS14915 PF00145 C-5 cytosine-specific DNA methylase N16961_RS14935 PF01797 Transposase IS200 like N16961_RS14950 PF00271 Helicase conserved C-terminal domain N16961_RS14950 PF00270 DEAD/DEAH box helicase N16961_RS14955 PF03605 Anaerobic c4-dicarboxylate membrane transporter N16961_RS14960 PF02540 NAD synthase N16961_RS14965 PF01467 Cytidylyltransferase-like N16961_RS14975 PF11849 Domain of unknown function (DUF3369) N16961_RS14980 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS14980 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_RS14980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS14990 PF03553 Na+/H+ antiporter family N16961_RS14995 PF07690 Major Facilitator Superfamily N16961_RS15005 PF08448 PAS fold N16961_RS15005 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS15010 PF00657 GDSL-like Lipase/Acylhydrolase N16961_RS15015 PF12563 Hemolytic toxin N terminal N16961_RS15015 PF16458 Beta-prism lectin N16961_RS15015 PF07968 Leukocidin/Hemolysin toxin family N16961_RS15020 PF12729 Four helix bundle sensory module for signal transduction N16961_RS15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS15020 PF00672 HAMP domain N16961_RS15025 PF00561 alpha/beta hydrolase fold N16961_RS15030 PF03280 Proteobacterial lipase chaperone protein N16961_RS15035 PF00801 PKD domain N16961_RS15035 PF05547 Immune inhibitor A peptidase M6 N16961_RS15055 PF01032 FecCD transport family N16961_RS15060 PF01032 FecCD transport family N16961_RS15065 PF00005 ABC transporter N16961_RS15070 PF12833 Helix-turn-helix domain N16961_RS15075 PF07715 TonB-dependent Receptor Plug Domain N16961_RS15075 PF00593 TonB dependent receptor N16961_RS15085 PF00871 Acetokinase family N16961_RS15100 PF00672 HAMP domain N16961_RS15100 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS15100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS15105 PF00486 Transcriptional regulatory protein, C terminal N16961_RS15105 PF00072 Response regulator receiver domain N16961_RS15115 PF01261 Xylose isomerase-like TIM barrel N16961_RS15120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family N16961_RS15130 PF00596 Class II Aldolase and Adducin N-terminal domain N16961_RS15135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_RS15140 PF03611 PTS system sugar-specific permease component N16961_RS15145 PF00455 DeoR C terminal sensor domain N16961_RS15145 PF08220 DeoR-like helix-turn-helix domain N16961_RS15155 PF01292 Prokaryotic cytochrome b561 N16961_RS15160 PF00128 Alpha amylase, catalytic domain N16961_RS15165 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS15185 PF00486 Transcriptional regulatory protein, C terminal N16961_RS15185 PF00072 Response regulator receiver domain N16961_RS15190 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS15190 PF13426 PAS domain N16961_RS15190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS15190 PF00672 HAMP domain N16961_RS15190 PF14827 Double sensory domain of two-component sensor kinase N16961_RS15230 PF07690 Major Facilitator Superfamily N16961_RS15235 PF02743 Cache domain N16961_RS15235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS15235 PF00672 HAMP domain N16961_RS15240 PF00282 Pyridoxal-dependent decarboxylase conserved domain N16961_RS15245 PF07943 Penicillin-binding protein 5, C-terminal domain N16961_RS15245 PF00768 D-alanyl-D-alanine carboxypeptidase N16961_RS15260 PF00194 Eukaryotic-type carbonic anhydrase N16961_RS15265 PF01797 Transposase IS200 like N16961_RS15275 PF02347 Glycine cleavage system P-protein N16961_RS15280 PF01597 Glycine cleavage H-protein N16961_RS15285 PF00464 Serine hydroxymethyltransferase N16961_RS15295 PF08669 Glycine cleavage T-protein C-terminal barrel domain N16961_RS15295 PF01571 Aminomethyltransferase folate-binding domain N16961_RS15305 PF01609 Transposase DDE domain N16961_RS15305 PF05598 Transposase domain (DUF772) N16961_RS15330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain N16961_RS15330 PF02824 TGS domain N16961_RS15330 PF03129 Anticodon binding domain N16961_RS15330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) N16961_RS15335 PF00707 Translation initiation factor IF-3, C-terminal domain N16961_RS15335 PF05198 Translation initiation factor IF-3, N-terminal domain N16961_RS15340 PF01632 Ribosomal protein L35 N16961_RS15345 PF00453 Ribosomal protein L20 N16961_RS15350 PF13495 Phage integrase, N-terminal SAM-like domain N16961_RS15350 PF00589 Phage integrase family N16961_RS15425 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS15475 PF13286 Phosphohydrolase-associated domain N16961_RS15475 PF01966 HD domain N16961_RS15505 PF00293 NUDIX domain N16961_RS15530 PF13302 Acetyltransferase (GNAT) domain N16961_RS15535 PF08212 Lipocalin-like domain N16961_RS15570 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ N16961_RS15600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS15680 PF17676 LD-carboxypeptidase C-terminal domain N16961_RS15680 PF02016 LD-carboxypeptidase N-terminal domain N16961_RS15700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS15740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS15760 PF08212 Lipocalin-like domain N16961_RS15780 PF04229 GrpB protein N16961_RS15790 PF01810 LysE type translocator N16961_RS15830 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH N16961_RS16020 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB N16961_RS16025 PF01381 Helix-turn-helix N16961_RS16050 PF02567 Phenazine biosynthesis-like protein N16961_RS16085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS16125 PF08212 Lipocalin-like domain N16961_RS16185 PF13302 Acetyltransferase (GNAT) domain N16961_RS16215 PF02567 Phenazine biosynthesis-like protein N16961_RS16315 PF17676 LD-carboxypeptidase C-terminal domain N16961_RS16315 PF02016 LD-carboxypeptidase N-terminal domain N16961_RS16340 PF08212 Lipocalin-like domain N16961_RS16345 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N16961_RS16365 PF01555 DNA methylase N16961_RS16410 PF01965 DJ-1/PfpI family N16961_RS16410 PF12833 Helix-turn-helix domain N16961_RS16470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS16520 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system N16961_RS16525 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA N16961_RS16535 PF01609 Transposase DDE domain N16961_RS16535 PF05598 Transposase domain (DUF772) N16961_RS16540 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS16560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS16570 PF05016 ParE toxin of type II toxin-antitoxin system, parDE N16961_RS16640 PF07859 alpha/beta hydrolase fold N16961_RS16655 PF01797 Transposase IS200 like N16961_RS16725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS16750 PF03477 ATP cone domain N16961_RS16750 PF13597 Anaerobic ribonucleoside-triphosphate reductase N16961_RS16760 PF00155 Aminotransferase class I and II N16961_RS16765 PF08443 RimK-like ATP-grasp domain N16961_RS16765 PF18030 RimK PreATP-grasp domain N16961_RS16770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_RS16770 PF02378 Phosphotransferase system, EIIC N16961_RS16775 PF00294 pfkB family carbohydrate kinase N16961_RS16780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_RS16780 PF00381 PTS HPr component phosphorylation site N16961_RS16785 PF00356 Bacterial regulatory proteins, lacI family N16961_RS16785 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N16961_RS16790 PF00149 Calcineurin-like phosphoesterase N16961_RS16790 PF12320 Type 5 capsule protein repressor C-terminal domain N16961_RS16795 PF13476 AAA domain N16961_RS16800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS16800 PF00072 Response regulator receiver domain N16961_RS16810 PF00155 Aminotransferase class I and II N16961_RS16820 PF00654 Voltage gated chloride channel N16961_RS16825 PF02492 CobW/HypB/UreG, nucleotide-binding domain N16961_RS16825 PF07683 Cobalamin synthesis protein cobW C-terminal domain N16961_RS16830 PF01926 50S ribosome-binding GTPase N16961_RS16835 PF02705 K+ potassium transporter N16961_RS16840 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II N16961_RS16840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain N16961_RS16840 PF10371 Domain of unknown function N16961_RS16840 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg N16961_RS16840 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase N16961_RS16845 PF02702 Osmosensitive K+ channel His kinase sensor domain N16961_RS16845 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS16845 PF13493 Domain of unknown function (DUF4118) N16961_RS16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS16850 PF00072 Response regulator receiver domain N16961_RS16850 PF00486 Transcriptional regulatory protein, C terminal N16961_RS16855 PF02416 mttA/Hcf106 family N16961_RS16860 PF09335 SNARE associated Golgi protein N16961_RS16870 PF10388 EAL-domain associated signalling protein domain N16961_RS16870 PF00563 EAL domain N16961_RS16880 PF01292 Prokaryotic cytochrome b561 N16961_RS16885 PF04264 YceI-like domain N16961_RS16890 PF01226 Formate/nitrite transporter N16961_RS16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS16895 PF03466 LysR substrate binding domain N16961_RS16900 PF06496 Protein of unknown function (DUF1097) N16961_RS16905 PF11398 Protein of unknown function (DUF2813) N16961_RS16910 PF00149 Calcineurin-like phosphoesterase N16961_RS16910 PF02872 5'-nucleotidase, C-terminal domain N16961_RS16915 PF03741 Integral membrane protein TerC family N16961_RS16925 PF03831 PhnA domain N16961_RS16925 PF08274 PhnA Zinc-Ribbon N16961_RS16960 PF08448 PAS fold N16961_RS16960 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS16980 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS16980 PF17158 Membrane-associated sensor, integral membrane domain N16961_RS16995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain N16961_RS16995 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch N16961_RS16995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain N16961_RS17000 PF02233 NAD(P) transhydrogenase beta subunit N16961_RS17010 PF00486 Transcriptional regulatory protein, C terminal N16961_RS17010 PF00072 Response regulator receiver domain N16961_RS17025 PF03701 Uncharacterised protein family (UPF0181) N16961_RS17030 PF01253 Translation initiation factor SUI1 N16961_RS17040 PF07478 D-ala D-ala ligase C-terminus N16961_RS17040 PF01820 D-ala D-ala ligase N-terminus N16961_RS17050 PF00583 Acetyltransferase (GNAT) family N16961_RS17050 PF13380 CoA binding domain N16961_RS17050 PF13607 Succinyl-CoA ligase like flavodoxin domain N16961_RS17055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS17055 PF03466 LysR substrate binding domain N16961_RS17060 PF00593 TonB dependent receptor N16961_RS17060 PF07715 TonB-dependent Receptor Plug Domain N16961_RS17065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_RS17065 PF12793 Sugar transport-related sRNA regulator N-term N16961_RS17075 PF03061 Thioesterase superfamily N16961_RS17100 PF02798 Glutathione S-transferase, N-terminal domain N16961_RS17100 PF00043 Glutathione S-transferase, C-terminal domain N16961_RS17115 PF03479 Plants and Prokaryotes Conserved (PCC) domain N16961_RS17115 PF12804 MobA-like NTP transferase domain N16961_RS17115 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS17120 PF00005 ABC transporter N16961_RS17120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_RS17125 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_RS17125 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS17130 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS17135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle N16961_RS17160 PF00854 POT family N16961_RS17170 PF00392 Bacterial regulatory proteins, gntR family N16961_RS17170 PF07702 UTRA domain N16961_RS17175 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS17180 PF00005 ABC transporter N16961_RS17190 PF00266 Aminotransferase class-V N16961_RS17195 PF00202 Aminotransferase class-III N16961_RS17200 PF13419 Haloacid dehalogenase-like hydrolase N16961_RS17205 PF01272 Transcription elongation factor, GreA/GreB, C-term N16961_RS17205 PF14760 Rnk N-terminus N16961_RS17210 PF13419 Haloacid dehalogenase-like hydrolase N16961_RS17225 PF01741 Large-conductance mechanosensitive channel, MscL N16961_RS17230 PF01268 Formate--tetrahydrofolate ligase N16961_RS17235 PF01625 Peptide methionine sulfoxide reductase N16961_RS17235 PF01641 SelR domain N16961_RS17240 PF01227 GTP cyclohydrolase I N16961_RS17245 PF03453 MoeA N-terminal region (domain I and II) N16961_RS17245 PF03454 MoeA C-terminal region (domain IV) N16961_RS17245 PF00994 Probable molybdopterin binding domain N16961_RS17250 PF00899 ThiF family N16961_RS17260 PF00581 Rhodanese-like domain N16961_RS17265 PF04198 Putative sugar-binding domain N16961_RS17275 PF00923 Transaldolase/Fructose-6-phosphate aldolase N16961_RS17280 PF02780 Transketolase, C-terminal domain N16961_RS17280 PF00456 Transketolase, thiamine diphosphate binding domain N16961_RS17280 PF02779 Transketolase, pyrimidine binding domain N16961_RS17295 PF01043 SecA preprotein cross-linking domain N16961_RS17295 PF07517 SecA DEAD-like domain N16961_RS17295 PF02810 SEC-C motif N16961_RS17295 PF07516 SecA Wing and Scaffold domain N16961_RS17305 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain N16961_RS17305 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain N16961_RS17320 PF06942 GlpM protein N16961_RS17330 PF03466 LysR substrate binding domain N16961_RS17330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS17335 PF03992 Antibiotic biosynthesis monooxygenase N16961_RS17340 PF00881 Nitroreductase family N16961_RS17350 PF00873 AcrB/AcrD/AcrF family N16961_RS17365 PF04143 Sulphur transport N16961_RS17380 PF07992 Pyridine nucleotide-disulphide oxidoreductase N16961_RS17380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain N16961_RS17425 PF00367 phosphotransferase system, EIIB N16961_RS17425 PF02378 Phosphotransferase system, EIIC N16961_RS17430 PF00356 Bacterial regulatory proteins, lacI family N16961_RS17435 PF08244 Glycosyl hydrolases family 32 C terminal N16961_RS17435 PF00251 Glycosyl hydrolases family 32 N-terminal domain N16961_RS17440 PF00294 pfkB family carbohydrate kinase N16961_RS17445 PF01266 FAD dependent oxidoreductase N16961_RS17445 PF16901 C-terminal domain of alpha-glycerophosphate oxidase N16961_RS17450 PF00672 HAMP domain N16961_RS17450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS17455 PF13488 Glycine zipper N16961_RS17455 PF00691 OmpA family N16961_RS17460 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase N16961_RS17460 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase N16961_RS17465 PF13419 Haloacid dehalogenase-like hydrolase N16961_RS17470 PF12729 Four helix bundle sensory module for signal transduction N16961_RS17470 PF00672 HAMP domain N16961_RS17470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS17480 PF03606 C4-dicarboxylate anaerobic carrier N16961_RS17485 PF03313 Serine dehydratase alpha chain N16961_RS17485 PF03315 Serine dehydratase beta chain N16961_RS17490 PF00474 Sodium:solute symporter family N16961_RS17505 PF00356 Bacterial regulatory proteins, lacI family N16961_RS17510 PF00072 Response regulator receiver domain N16961_RS17510 PF00196 Bacterial regulatory proteins, luxR family N16961_RS17515 PF00672 HAMP domain N16961_RS17515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS17515 PF07730 Histidine kinase N16961_RS17515 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term N16961_RS17520 PF12838 4Fe-4S dicluster domain N16961_RS17520 PF13187 4Fe-4S dicluster domain N16961_RS17530 PF04879 Molybdopterin oxidoreductase Fe4S4 domain N16961_RS17530 PF00384 Molybdopterin oxidoreductase N16961_RS17530 PF01568 Molydopterin dinucleotide binding domain N16961_RS17535 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) N16961_RS17540 PF03264 NapC/NirT cytochrome c family, N-terminal region N16961_RS17550 PF01966 HD domain N16961_RS17555 PF00072 Response regulator receiver domain N16961_RS17555 PF00196 Bacterial regulatory proteins, luxR family N16961_RS17560 PF05231 MASE1 N16961_RS17560 PF07730 Histidine kinase N16961_RS17560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS17565 PF07690 Major Facilitator Superfamily N16961_RS17575 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS17580 PF00005 ABC transporter N16961_RS17580 PF08402 TOBE domain N16961_RS17585 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus N16961_RS17595 PF02803 Thiolase, C-terminal domain N16961_RS17595 PF00108 Thiolase, N-terminal domain N16961_RS17600 PF00106 short chain dehydrogenase N16961_RS17605 PF07549 SecD/SecF GG Motif N16961_RS17605 PF02355 Protein export membrane protein N16961_RS17610 PF02355 Protein export membrane protein N16961_RS17610 PF13721 SecD export protein N-terminal TM region N16961_RS17610 PF07549 SecD/SecF GG Motif N16961_RS17625 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS17630 PF00483 Nucleotidyl transferase N16961_RS17635 PF06483 Chitinase C N16961_RS17635 PF00704 Glycosyl hydrolases family 18 N16961_RS17640 PF00465 Iron-containing alcohol dehydrogenase N16961_RS17650 PF00072 Response regulator receiver domain N16961_RS17650 PF02954 Bacterial regulatory protein, Fis family N16961_RS17650 PF14532 Sigma-54 interaction domain N16961_RS17655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS17655 PF02743 Cache domain N16961_RS17655 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS17665 PF07690 Major Facilitator Superfamily N16961_RS17670 PF00224 Pyruvate kinase, barrel domain N16961_RS17670 PF02887 Pyruvate kinase, alpha/beta domain N16961_RS17675 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS17675 PF01627 Hpt domain N16961_RS17675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS17675 PF00072 Response regulator receiver domain N16961_RS17675 PF00672 HAMP domain N16961_RS17680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family N16961_RS17685 PF02142 MGS-like domain N16961_RS17690 PF00857 Isochorismatase family N16961_RS17695 PF01219 Prokaryotic diacylglycerol kinase N16961_RS17710 PF12462 DNA helicase IV / RNA helicase N terminal N16961_RS17710 PF00580 UvrD/REP helicase N-terminal domain N16961_RS17710 PF13361 UvrD-like helicase C-terminal domain N16961_RS17715 PF12805 FUSC-like inner membrane protein yccS N16961_RS17720 PF00072 Response regulator receiver domain N16961_RS17720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS17720 PF13188 PAS domain N16961_RS17720 PF08448 PAS fold N16961_RS17720 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS17745 PF03459 TOBE domain N16961_RS17745 PF00005 ABC transporter N16961_RS17750 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS17760 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain N16961_RS17760 PF07685 CobB/CobQ-like glutamine amidotransferase domain N16961_RS17805 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS17805 PF09308 LuxQ, periplasmic N16961_RS17805 PF00072 Response regulator receiver domain N16961_RS17805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS17810 PF13407 Periplasmic binding protein domain N16961_RS17820 PF01541 GIY-YIG catalytic domain N16961_RS17825 PF04337 Protein of unknown function, DUF480 N16961_RS17835 PF04363 Protein of unknown function (DUF496) N16961_RS17850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain N16961_RS17850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain N16961_RS17855 PF00230 Major intrinsic protein N16961_RS17860 PF01266 FAD dependent oxidoreductase N16961_RS17860 PF04324 BFD-like [2Fe-2S] binding domain N16961_RS17865 PF00890 FAD binding domain N16961_RS17870 PF02754 Cysteine-rich domain N16961_RS17870 PF13183 4Fe-4S dicluster domain N16961_RS17875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal N16961_RS17875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III N16961_RS17880 PF00085 Thioredoxin N16961_RS17885 PF07690 Major Facilitator Superfamily N16961_RS17910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS17910 PF03466 LysR substrate binding domain N16961_RS17915 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS17920 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS17925 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_RS17930 PF00005 ABC transporter N16961_RS17940 PF05762 VWA domain containing CoxE-like protein N16961_RS17945 PF17868 AAA lid domain N16961_RS17945 PF12592 Protein of unknown function (DUF3763) N16961_RS17945 PF07728 AAA domain (dynein-related subfamily) N16961_RS17950 PF00293 NUDIX domain N16961_RS17955 PF01212 Beta-eliminating lyase N16961_RS17960 PF00034 Cytochrome c N16961_RS17965 PF08361 MAATS-type transcriptional repressor, C-terminal region N16961_RS17965 PF00440 Bacterial regulatory proteins, tetR family N16961_RS17970 PF00270 DEAD/DEAH box helicase N16961_RS17970 PF00271 Helicase conserved C-terminal domain N16961_RS17975 PF04336 Acyl carrier protein phosphodiesterase N16961_RS17985 PF03222 Tryptophan/tyrosine permease family N16961_RS17990 PF12729 Four helix bundle sensory module for signal transduction N16961_RS17990 PF00672 HAMP domain N16961_RS17990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS17995 PF16363 GDP-mannose 4,6 dehydratase N16961_RS18005 PF03746 LamB/YcsF family N16961_RS18015 PF02626 Carboxyltransferase domain, subdomain A and B N16961_RS18025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain N16961_RS18025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain N16961_RS18035 PF00005 ABC transporter N16961_RS18040 PF13472 GDSL-like Lipase/Acylhydrolase family N16961_RS18045 PF12241 Trans-2-enoyl-CoA reductase catalytic region N16961_RS18045 PF07055 Enoyl reductase FAD binding domain N16961_RS18045 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase N16961_RS18050 PF00563 EAL domain N16961_RS18050 PF00498 FHA domain N16961_RS18050 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS18065 PF00226 DnaJ domain N16961_RS18065 PF00684 DnaJ central domain N16961_RS18065 PF01556 DnaJ C terminal domain N16961_RS18095 PF02796 Helix-turn-helix domain of resolvase N16961_RS18095 PF00239 Resolvase, N terminal domain N16961_RS18105 PF13419 Haloacid dehalogenase-like hydrolase N16961_RS18120 PF00294 pfkB family carbohydrate kinase N16961_RS18125 PF00884 Sulfatase N16961_RS18135 PF00270 DEAD/DEAH box helicase N16961_RS18135 PF03880 DbpA RNA binding domain N16961_RS18135 PF00271 Helicase conserved C-terminal domain N16961_RS18140 PF00773 RNB domain N16961_RS18140 PF00575 S1 RNA binding domain N16961_RS18140 PF08206 Ribonuclease B OB domain N16961_RS18150 PF12849 PBP superfamily domain N16961_RS18155 PF01575 MaoC like domain N16961_RS18160 PF04244 Deoxyribodipyrimidine photo-lyase-related protein N16961_RS18165 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading N16961_RS18165 PF18416 N-acetylglucosamine binding protein domain 2 N16961_RS18170 PF04151 Bacterial pre-peptidase C-terminal domain N16961_RS18170 PF02868 Thermolysin metallopeptidase, alpha-helical domain N16961_RS18170 PF01447 Thermolysin metallopeptidase, catalytic domain N16961_RS18170 PF03413 Peptidase propeptide and YPEB domain N16961_RS18170 PF07504 Fungalysin/Thermolysin Propeptide Motif N16961_RS18175 PF04151 Bacterial pre-peptidase C-terminal domain N16961_RS18175 PF04389 Peptidase family M28 N16961_RS18180 PF00491 Arginase family N16961_RS18185 PF17810 Arginine decarboxylase helical bundle domain N16961_RS18185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain N16961_RS18185 PF17944 Arginine decarboxylase C-terminal helical extension N16961_RS18195 PF01769 Divalent cation transporter N16961_RS18195 PF03448 MgtE intracellular N domain N16961_RS18195 PF00571 CBS domain N16961_RS18200 PF00166 Chaperonin 10 Kd subunit N16961_RS18205 PF00118 TCP-1/cpn60 chaperonin family N16961_RS18215 PF13840 ACT domain N16961_RS18215 PF00696 Amino acid kinase family N16961_RS18220 PF06339 Ectoine synthase N16961_RS18225 PF00202 Aminotransferase class-III N16961_RS18230 PF00583 Acetyltransferase (GNAT) family N16961_RS18235 PF01329 Pterin 4 alpha carbinolamine dehydratase N16961_RS18240 PF00351 Biopterin-dependent aromatic amino acid hydroxylase N16961_RS18245 PF00501 AMP-binding enzyme N16961_RS18245 PF13193 AMP-binding enzyme C-terminal domain N16961_RS18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS18270 PF03466 LysR substrate binding domain N16961_RS18280 PF00892 EamA-like transporter family N16961_RS18285 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal N16961_RS18285 PF14602 Hexapeptide repeat of succinyl-transferase N16961_RS18285 PF00132 Bacterial transferase hexapeptide (six repeats) N16961_RS18290 PF01595 Cyclin M transmembrane N-terminal domain N16961_RS18290 PF03471 Transporter associated domain N16961_RS18290 PF00571 CBS domain N16961_RS18295 PF02566 OsmC-like protein N16961_RS18300 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region N16961_RS18305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain N16961_RS18305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain N16961_RS18320 PF13520 Amino acid permease N16961_RS18325 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS18335 PF00072 Response regulator receiver domain N16961_RS18335 PF04397 LytTr DNA-binding domain N16961_RS18340 PF07694 5TMR of 5TMR-LYT N16961_RS18340 PF13492 GAF domain N16961_RS18340 PF06580 Histidine kinase N16961_RS18340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS18355 PF00005 ABC transporter N16961_RS18355 PF12704 MacB-like periplasmic core domain N16961_RS18355 PF02687 FtsX-like permease family N16961_RS18360 PF00005 ABC transporter N16961_RS18375 PF00248 Aldo/keto reductase family N16961_RS18380 PF00128 Alpha amylase, catalytic domain N16961_RS18390 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) N16961_RS18395 PF12262 Bacterial virulence factor lipase N-terminal N16961_RS18400 PF08447 PAS fold N16961_RS18400 PF13426 PAS domain N16961_RS18400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS18405 PF04151 Bacterial pre-peptidase C-terminal domain N16961_RS18405 PF02868 Thermolysin metallopeptidase, alpha-helical domain N16961_RS18405 PF07504 Fungalysin/Thermolysin Propeptide Motif N16961_RS18405 PF03413 Peptidase propeptide and YPEB domain N16961_RS18405 PF01447 Thermolysin metallopeptidase, catalytic domain N16961_RS18415 PF03922 OmpW family N16961_RS18425 PF00768 D-alanyl-D-alanine carboxypeptidase N16961_RS18430 PF00392 Bacterial regulatory proteins, gntR family N16961_RS18430 PF00155 Aminotransferase class I and II N16961_RS18435 PF01654 Cytochrome bd terminal oxidase subunit I N16961_RS18440 PF02322 Cytochrome bd terminal oxidase subunit II N16961_RS18460 PF00291 Pyridoxal-phosphate dependent enzyme N16961_RS18465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS18465 PF03466 LysR substrate binding domain N16961_RS18475 PF00589 Phage integrase family N16961_RS18475 PF12167 Arm DNA-binding domain N16961_RS18515 PF08240 Alcohol dehydrogenase GroES-like domain N16961_RS18515 PF00107 Zinc-binding dehydrogenase N16961_RS18520 PF00155 Aminotransferase class I and II N16961_RS18540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS18540 PF03466 LysR substrate binding domain N16961_RS18545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily N16961_RS18570 PF01966 HD domain N16961_RS18575 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain N16961_RS18575 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain N16961_RS18580 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N16961_RS18585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase N16961_RS18585 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain N16961_RS18610 PF02595 Glycerate kinase family N16961_RS18615 PF02447 GntP family permease N16961_RS18620 PF05651 Putative sugar diacid recognition N16961_RS18620 PF13556 PucR C-terminal helix-turn-helix domain N16961_RS18620 PF17853 GGDEF-like domain N16961_RS18625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS18625 PF00672 HAMP domain N16961_RS18630 PF01243 Pyridoxamine 5'-phosphate oxidase N16961_RS18635 PF06228 Haem utilisation ChuX/HutX N16961_RS18640 PF04055 Radical SAM superfamily N16961_RS18645 PF03544 Gram-negative bacterial TonB protein C-terminal N16961_RS18650 PF01618 MotA/TolQ/ExbB proton channel family N16961_RS18655 PF02472 Biopolymer transport protein ExbD/TolR N16961_RS18660 PF01497 Periplasmic binding protein N16961_RS18665 PF01032 FecCD transport family N16961_RS18670 PF00005 ABC transporter N16961_RS18700 PF02743 Cache domain N16961_RS18700 PF00672 HAMP domain N16961_RS18700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS18705 PF03476 MOSC N-terminal beta barrel domain N16961_RS18705 PF03473 MOSC domain N16961_RS18705 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_RS18705 PF03476 MOSC N-terminal beta barrel domain N16961_RS18705 PF00111 2Fe-2S iron-sulfur cluster binding domain N16961_RS18705 PF03473 MOSC domain N16961_RS18715 PF01979 Amidohydrolase family N16961_RS18725 PF05656 Protein of unknown function (DUF805) N16961_RS18735 PF05958 tRNA (Uracil-5-)-methyltransferase N16961_RS18740 PF05661 Protein of unknown function (DUF808) N16961_RS18750 PF00313 'Cold-shock' DNA-binding domain N16961_RS18780 PF08448 PAS fold N16961_RS18780 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS18785 PF08220 DeoR-like helix-turn-helix domain N16961_RS18785 PF00455 DeoR C terminal sensor domain N16961_RS18800 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS18805 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS18805 PF14785 Maltose transport system permease protein MalF P2 domain N16961_RS18810 PF01547 Bacterial extracellular solute-binding protein N16961_RS18815 PF00005 ABC transporter N16961_RS18815 PF08402 TOBE domain N16961_RS18820 PF13302 Acetyltransferase (GNAT) domain N16961_RS18835 PF01906 Putative heavy-metal-binding N16961_RS18840 PF00196 Bacterial regulatory proteins, luxR family N16961_RS18850 PF01584 CheW-like domain N16961_RS18850 PF00072 Response regulator receiver domain N16961_RS18855 PF01047 MarR family N16961_RS18860 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS18880 PF00563 EAL domain N16961_RS18880 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS18880 PF03707 Bacterial signalling protein N terminal repeat N16961_RS18900 PF03466 LysR substrate binding domain N16961_RS18900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS18905 PF00563 EAL domain N16961_RS18905 PF00990 Diguanylate cyclase, GGDEF domain N16961_RS18915 PF02678 Pirin N16961_RS18915 PF05726 Pirin C-terminal cupin domain N16961_RS18920 PF06865 Pyrimidine/purine nucleoside phosphorylase N16961_RS18930 PF07690 Major Facilitator Superfamily N16961_RS18940 PF00672 HAMP domain N16961_RS18940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS18940 PF17200 Single Cache domain 2 N16961_RS18945 PF05362 Lon protease (S16) C-terminal proteolytic domain N16961_RS18945 PF13654 AAA domain N16961_RS18955 PF00005 ABC transporter N16961_RS18955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_RS18960 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_RS18965 PF13426 PAS domain N16961_RS18965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS18965 PF08447 PAS fold N16961_RS18980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS18980 PF03466 LysR substrate binding domain N16961_RS18985 PF02652 L-lactate permease N16961_RS18990 PF01070 FMN-dependent dehydrogenase N16961_RS19000 PF03618 Kinase/pyrophosphorylase N16961_RS19005 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain N16961_RS19005 PF00391 PEP-utilising enzyme, mobile domain N16961_RS19005 PF02896 PEP-utilising enzyme, TIM barrel domain N16961_RS19010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS19010 PF08447 PAS fold N16961_RS19015 PF01554 MatE N16961_RS19020 PF00271 Helicase conserved C-terminal domain N16961_RS19020 PF00270 DEAD/DEAH box helicase N16961_RS19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS19025 PF03466 LysR substrate binding domain N16961_RS19035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N16961_RS19045 PF00005 ABC transporter N16961_RS19045 PF00664 ABC transporter transmembrane region N16961_RS19055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family N16961_RS19065 PF01810 LysE type translocator N16961_RS19070 PF12833 Helix-turn-helix domain N16961_RS19085 PF01557 Fumarylacetoacetate (FAA) hydrolase family N16961_RS19090 PF01047 MarR family N16961_RS19095 PF02566 OsmC-like protein N16961_RS19100 PF13609 Gram-negative porin N16961_RS19105 PF00892 EamA-like transporter family N16961_RS19110 PF00462 Glutaredoxin N16961_RS19115 PF07670 Nucleoside recognition N16961_RS19120 PF07670 Nucleoside recognition N16961_RS19125 PF03600 Citrate transporter N16961_RS19135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain N16961_RS19135 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain N16961_RS19140 PF00730 HhH-GPD superfamily base excision DNA repair protein N16961_RS19140 PF06029 AlkA N-terminal domain N16961_RS19145 PF07681 DoxX N16961_RS19150 PF03466 LysR substrate binding domain N16961_RS19150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS19170 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase N16961_RS19180 PF07148 Maltose operon periplasmic protein precursor (MalM) N16961_RS19185 PF02264 LamB porin N16961_RS19190 PF00128 Alpha amylase, catalytic domain N16961_RS19190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) N16961_RS19200 PF12729 Four helix bundle sensory module for signal transduction N16961_RS19200 PF00672 HAMP domain N16961_RS19200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS19215 PF00672 HAMP domain N16961_RS19215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS19225 PF00793 DAHP synthetase I family N16961_RS19230 PF00005 ABC transporter N16961_RS19235 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS19240 PF00497 Bacterial extracellular solute-binding proteins, family 3 N16961_RS19245 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS19250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II N16961_RS19250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III N16961_RS19250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I N16961_RS19250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain N16961_RS19260 PF01551 Peptidase family M23 N16961_RS19260 PF04225 Opacity-associated protein A LysM-like domain N16961_RS19270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit N16961_RS19270 PF02378 Phosphotransferase system, EIIC N16961_RS19270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 N16961_RS19275 PF01232 Mannitol dehydrogenase Rossmann domain N16961_RS19275 PF08125 Mannitol dehydrogenase C-terminal domain N16961_RS19280 PF05068 Mannitol repressor N16961_RS19285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold N16961_RS19315 PF13460 NAD(P)H-binding N16961_RS19320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS19320 PF03466 LysR substrate binding domain N16961_RS19325 PF02743 Cache domain N16961_RS19325 PF00672 HAMP domain N16961_RS19325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS19335 PF00106 short chain dehydrogenase N16961_RS19340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family N16961_RS19340 PF03466 LysR substrate binding domain N16961_RS19345 PF04013 Putative SAM-dependent RNA methyltransferase N16961_RS19350 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase N16961_RS19360 PF13520 Amino acid permease N16961_RS19365 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain N16961_RS19365 PF01276 Orn/Lys/Arg decarboxylase, major domain N16961_RS19365 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain N16961_RS19370 PF10940 Protein of unknown function (DUF2618) N16961_RS19380 PF00171 Aldehyde dehydrogenase family N16961_RS19385 PF01037 Lrp/AsnC ligand binding domain N16961_RS19390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS19390 PF00672 HAMP domain N16961_RS19390 PF02743 Cache domain N16961_RS19400 PF00474 Sodium:solute symporter family N16961_RS19410 PF00171 Aldehyde dehydrogenase family N16961_RS19410 PF01619 Proline dehydrogenase N16961_RS19410 PF14850 DNA-binding domain of Proline dehydrogenase N16961_RS19410 PF18327 Proline utilization A proline dehydrogenase N-terminal domain N16961_RS19415 PF12833 Helix-turn-helix domain N16961_RS19425 PF03781 Sulfatase-modifying factor enzyme 1 N16961_RS19430 PF00196 Bacterial regulatory proteins, luxR family N16961_RS19430 PF00072 Response regulator receiver domain N16961_RS19435 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region N16961_RS19435 PF01243 Pyridoxamine 5'-phosphate oxidase N16961_RS19440 PF00529 HlyD membrane-fusion protein of T1SS N16961_RS19455 PF03412 Peptidase C39 family N16961_RS19455 PF00664 ABC transporter transmembrane region N16961_RS19455 PF00005 ABC transporter N16961_RS19465 PF00072 Response regulator receiver domain N16961_RS19465 PF00486 Transcriptional regulatory protein, C terminal N16961_RS19475 PF02743 Cache domain N16961_RS19475 PF00672 HAMP domain N16961_RS19475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS19480 PF00072 Response regulator receiver domain N16961_RS19480 PF01339 CheB methylesterase N16961_RS19485 PF03975 CheD chemotactic sensory transduction N16961_RS19490 PF01739 CheR methyltransferase, SAM binding domain N16961_RS19490 PF03705 CheR methyltransferase, all-alpha domain N16961_RS19495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain N16961_RS19495 PF02203 Tar ligand binding domain homologue N16961_RS19495 PF00672 HAMP domain N16961_RS19500 PF01584 CheW-like domain N16961_RS19505 PF01584 CheW-like domain N16961_RS19510 PF01627 Hpt domain N16961_RS19510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS19510 PF02895 Signal transducing histidine kinase, homodimeric domain N16961_RS19510 PF09078 CheY binding N16961_RS19510 PF01584 CheW-like domain N16961_RS19515 PF00072 Response regulator receiver domain N16961_RS19530 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS19535 PF12911 N-terminal TM domain of oligopeptide transport permease C N16961_RS19535 PF00528 Binding-protein-dependent transport system inner membrane component N16961_RS19540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region N16961_RS19540 PF00005 ABC transporter N16961_RS19545 PF08019 Phosphoethanolamine transferase EptA/EptB N16961_RS19545 PF00884 Sulfatase N16961_RS19550 PF08521 Two-component sensor kinase N-terminal N16961_RS19550 PF00512 His Kinase A (phospho-acceptor) domain N16961_RS19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase N16961_RS19555 PF00072 Response regulator receiver domain N16961_RS19555 PF00486 Transcriptional regulatory protein, C terminal N16961_RS19575 PF00501 AMP-binding enzyme N16961_RS19585 PF05127 Helicase N16961_RS19585 PF13718 GNAT acetyltransferase 2 N16961_RS19590 PF13416 Bacterial extracellular solute-binding protein