IR04_RS00010 PF14849 YidC periplasmic domain IR04_RS00040 PF00308 Bacterial dnaA protein IR04_RS00145 PF02386 Cation transport protein IR04_RS00200 PF01218 Coproporphyrinogen III oxidase IR04_RS00300 PF00210 Ferritin-like domain IR04_RS00315 PF02646 IR04_RS00315 IR04_RS00415 PF00490 Delta-aminolevulinic acid dehydratase IR04_RS00520 PF00990 GGDEF domain IR04_RS00520 PF08495 IR04_RS00520 IR04_RS00520 PF10442 IR04_RS00520 IR04_RS00575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IR04_RS00605 PF07715 TonB-dependent Receptor Plug Domain IR04_RS00660 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IR04_RS00660 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain IR04_RS00875 PF07715 TonB-dependent Receptor Plug Domain IR04_RS00905 PF01380 SIS domain IR04_RS00990 PF07507 IR04_RS00990 IR04_RS01075 PF00501 AMP-binding enzyme IR04_RS01085 PF04443 IR04_RS01085 IR04_RS01200 PF01808 AICARFT/IMPCHase bienzyme IR04_RS01205 PF01808 AICARFT/IMPCHase bienzyme IR04_RS01205 PF02142 MGS-like domain IR04_RS01215 PF00486 Transcriptional regulatory protein, C terminal IR04_RS01330 PF12832 MFS_1 like family IR04_RS01420 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IR04_RS01555 PF03946 Ribosomal protein L11, N-terminal domain IR04_RS01620 PF00623 RNA polymerase Rpb1, domain 2 IR04_RS01620 PF04997 RNA polymerase Rpb1, domain 1 IR04_RS01640 PF04998 RNA polymerase Rpb1, domain 5 IR04_RS01670 PF01208 Uroporphyrinogen decarboxylase (URO-D) IR04_RS01785 PF01119 DNA mismatch repair protein, C-terminal domain IR04_RS01800 PF01715 IPP transferase IR04_RS01810 PF01145 SPFH domain / Band 7 family IR04_RS01810 PF12221 IR04_RS01810 IR04_RS01915 PF00772 DnaB-like helicase N terminal domain IR04_RS01925 PF01168 Alanine racemase, N-terminal domain IR04_RS01950 PF00342 Phosphoglucose isomerase IR04_RS01980 PF01207 Dihydrouridine synthase (Dus) IR04_RS02100 PF00999 Sodium/hydrogen exchanger family IR04_RS02125 PF02310 B12 binding domain IR04_RS02125 PF02607 B12 binding domain IR04_RS02125 PF02965 Vitamin B12 dependent methionine synthase, activation domain IR04_RS02325 PF00348 Polyprenyl synthetase IR04_RS02410 PF00633 Helix-hairpin-helix motif IR04_RS02690 PF02660 IR04_RS02690 IR04_RS02735 PF00488 MutS domain V IR04_RS02755 PF00291 Pyridoxal-phosphate dependent enzyme IR04_RS03130 PF13188 PAS domain IR04_RS03260 PF00009 Elongation factor Tu GTP binding domain IR04_RS03260 PF04760 Translation initiation factor IF-2, N-terminal region IR04_RS03355 PF00563 EAL domain IR04_RS03460 PF00872 IR04_RS03460 IR04_RS03590 PF17194 IR04_RS03590 IR04_RS03645 PF06986 IR04_RS03645 IR04_RS04145 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS04235 PF00459 Inositol monophosphatase family IR04_RS04330 PF02601 IR04_RS04330 IR04_RS04330 PF13742 IR04_RS04330 IR04_RS04955 PF00258 Flavodoxin IR04_RS04960 PF01926 50S ribosome-binding GTPase IR04_RS04960 PF10396 GTP-binding protein TrmE N-terminus IR04_RS04960 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE IR04_RS04965 PF02096 60Kd inner membrane protein IR04_RS04965 PF14849 YidC periplasmic domain IR04_RS04970 PF01809 IR04_RS04970 IR04_RS04975 PF00825 Ribonuclease P IR04_RS04980 PF00468 Ribosomal protein L34 IR04_RS04985 PF00005 ABC transporter IR04_RS04990 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS04995 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS05000 PF00308 Bacterial dnaA protein IR04_RS05000 PF08299 Bacterial dnaA protein helix-turn-helix IR04_RS05000 PF11638 DnaA N-terminal domain IR04_RS05005 PF00712 DNA polymerase III beta subunit, N-terminal domain IR04_RS05005 PF02767 DNA polymerase III beta subunit, central domain IR04_RS05005 PF02768 DNA polymerase III beta subunit, C-terminal domain IR04_RS05010 PF02463 RecF/RecN/SMC N terminal domain IR04_RS05015 PF00204 DNA gyrase B IR04_RS05015 PF00986 DNA gyrase B subunit, carboxyl terminus IR04_RS05015 PF01751 Toprim domain IR04_RS05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS05030 PF00011 Hsp20/alpha crystallin family IR04_RS05035 PF00155 Aminotransferase class I and II IR04_RS05040 PF02092 IR04_RS05040 IR04_RS05040 PF05746 DALR anticodon binding domain IR04_RS05045 PF02091 Glycyl-tRNA synthetase alpha subunit IR04_RS05050 PF01169 IR04_RS05050 IR04_RS05060 PF01206 Sulfurtransferase TusA IR04_RS05070 PF00107 Zinc-binding dehydrogenase IR04_RS05070 PF08240 Alcohol dehydrogenase GroES-like domain IR04_RS05075 PF00291 Pyridoxal-phosphate dependent enzyme IR04_RS05075 PF00585 C-terminal regulatory domain of Threonine dehydratase IR04_RS05080 PF00920 Dehydratase family IR04_RS05085 PF01063 Aminotransferase class IV IR04_RS05090 PF13710 ACT domain IR04_RS05095 PF00205 Thiamine pyrophosphate enzyme, central domain IR04_RS05095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR04_RS05095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR04_RS05100 PF01078 Magnesium chelatase, subunit ChlI IR04_RS05100 PF13335 IR04_RS05100 IR04_RS05100 PF13541 Subunit ChlI of Mg-chelatase IR04_RS05105 PF01553 Acyltransferase IR04_RS05110 PF01323 DSBA-like thioredoxin domain IR04_RS05120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IR04_RS05120 PF12801 IR04_RS05120 IR04_RS05120 PF13746 4Fe-4S dicluster domain IR04_RS05125 PF06288 Protein of unknown function (DUF1040) IR04_RS05135 PF07070 IR04_RS05135 IR04_RS05140 PF03006 IR04_RS05140 IR04_RS05145 PF11355 IR04_RS05145 IR04_RS05150 PF02386 Cation transport protein IR04_RS05155 PF02080 TrkA-C domain IR04_RS05155 PF02254 TrkA-N domain IR04_RS05160 PF01029 NusB family IR04_RS05160 PF01189 NOL1/NOP2/sun family IR04_RS05165 PF00551 Formyl transferase IR04_RS05165 PF02911 Formyl transferase, C-terminal domain IR04_RS05170 PF01327 Polypeptide deformylase IR04_RS05175 PF01476 LysM domain IR04_RS05180 PF02481 DNA recombination-mediator protein A IR04_RS05185 PF04361 IR04_RS05185 IR04_RS05190 PF01396 IR04_RS05190 IR04_RS05195 PF02222 ATP-grasp domain IR04_RS05200 PF00731 AIR carboxylase IR04_RS05205 PF01300 Telomere recombination IR04_RS05210 PF01218 Coproporphyrinogen III oxidase IR04_RS05215 PF01488 Shikimate / quinate 5-dehydrogenase IR04_RS05215 PF08501 Shikimate dehydrogenase substrate binding domain IR04_RS05220 PF07369 Protein of unknown function (DUF1488) IR04_RS05225 PF00132 Bacterial transferase hexapeptide (six repeats) IR04_RS05270 PF02537 IR04_RS05270 IR04_RS05275 PF01964 ThiC family IR04_RS05275 PF13667 ThiC-associated domain IR04_RS05280 PF02581 Thiamine monophosphate synthase/TENI IR04_RS05285 PF00899 ThiF family IR04_RS05290 PF02597 ThiS family IR04_RS05295 PF05690 Thiazole biosynthesis protein ThiG IR04_RS05300 PF04055 Radical SAM superfamily IR04_RS05300 PF06968 Biotin and Thiamin Synthesis associated domain IR04_RS05305 PF00557 Metallopeptidase family M24 IR04_RS05305 PF01321 Creatinase/Prolidase N-terminal domain IR04_RS05305 PF16188 IR04_RS05305 IR04_RS05305 PF16189 IR04_RS05305 IR04_RS05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS05310 PF03466 LysR substrate binding domain IR04_RS05315 PF07690 Major Facilitator Superfamily IR04_RS05325 PF01037 AsnC family IR04_RS05325 PF13404 AsnC-type helix-turn-helix domain IR04_RS05330 PF00563 EAL domain IR04_RS05330 PF00990 GGDEF domain IR04_RS05330 PF13426 PAS domain IR04_RS05335 PF04445 Putative SAM-dependent methyltransferase IR04_RS05345 PF00892 EamA-like transporter family IR04_RS05350 PF00582 Universal stress protein family IR04_RS05360 PF00210 Ferritin-like domain IR04_RS05365 PF10625 IR04_RS05365 IR04_RS05370 PF03486 HI0933-like protein IR04_RS05375 PF00892 EamA-like transporter family IR04_RS05380 PF02646 IR04_RS05380 IR04_RS05385 PF01209 ubiE/COQ5 methyltransferase family IR04_RS05390 PF02036 SCP-2 sterol transfer family IR04_RS05395 PF03109 IR04_RS05395 IR04_RS05400 PF02416 mttA/Hcf106 family IR04_RS05405 PF02416 mttA/Hcf106 family IR04_RS05410 PF00902 Sec-independent protein translocase protein (TatC) IR04_RS05415 PF00034 Cytochrome c IR04_RS05415 PF03150 Di-haem cytochrome c peroxidase IR04_RS05420 PF01554 MatE IR04_RS05425 PF04072 Leucine carboxyl methyltransferase IR04_RS05430 PF00717 Peptidase S24-like IR04_RS05430 PF01726 LexA DNA binding domain IR04_RS05435 PF01553 Acyltransferase IR04_RS05440 PF01040 UbiA prenyltransferase family IR04_RS05445 PF04345 Chorismate lyase IR04_RS05455 PF03748 IR04_RS05455 IR04_RS05460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS05460 PF08447 PAS fold IR04_RS05460 PF08448 PAS fold IR04_RS05465 PF01694 Rhomboid family IR04_RS05465 PF12122 Protein of unknown function (DUF3582) IR04_RS05470 PF00581 Rhodanese-like domain IR04_RS05480 PF01026 TatD related DNase IR04_RS05485 PF00490 Delta-aminolevulinic acid dehydratase IR04_RS05490 PF13673 Acetyltransferase (GNAT) domain IR04_RS05495 PF00476 DNA polymerase family A IR04_RS05495 PF01367 5'-3' exonuclease, C-terminal SAM fold IR04_RS05495 PF01612 3'-5' exonuclease IR04_RS05495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IR04_RS05500 PF01926 50S ribosome-binding GTPase IR04_RS05510 PF13489 Methyltransferase domain IR04_RS05515 PF04220 IR04_RS05515 IR04_RS05520 PF10675 IR04_RS05520 IR04_RS05525 PF04055 Radical SAM superfamily IR04_RS05525 PF06969 HemN C-terminal domain IR04_RS05530 PF07219 IR04_RS05530 IR04_RS05535 PF04375 IR04_RS05535 IR04_RS05540 PF02602 Uroporphyrinogen-III synthase HemD IR04_RS05545 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IR04_RS05545 PF03900 Porphobilinogen deaminase, C-terminal domain IR04_RS05555 PF01295 IR04_RS05555 IR04_RS05555 PF12633 IR04_RS05555 IR04_RS05560 PF01491 Frataxin-like domain IR04_RS05565 PF13627 IR04_RS05565 IR04_RS05570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IR04_RS05570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IR04_RS05575 PF01678 Diaminopimelate epimerase IR04_RS05580 PF04340 Protein of unknown function, DUF484 IR04_RS05585 PF00589 Phage integrase family IR04_RS05585 PF02899 Phage integrase, N-terminal SAM-like domain IR04_RS05590 PF13419 Haloacid dehalogenase-like hydrolase IR04_RS05595 PF00563 EAL domain IR04_RS05595 PF00990 GGDEF domain IR04_RS05595 PF08495 IR04_RS05595 IR04_RS05595 PF10442 IR04_RS05595 IR04_RS05600 PF03942 IR04_RS05600 IR04_RS05615 PF08282 haloacid dehalogenase-like hydrolase IR04_RS05620 PF12146 Putative lysophospholipase IR04_RS05625 PF01810 IR04_RS05625 IR04_RS05630 PF00563 EAL domain IR04_RS05630 PF08668 HDOD domain IR04_RS05635 PF00210 Ferritin-like domain IR04_RS05640 PF10694 Protein of unknown function (DUF2500) IR04_RS05645 PF13643 IR04_RS05645 IR04_RS05660 PF07947 IR04_RS05660 IR04_RS05665 PF06611 IR04_RS05665 IR04_RS05670 PF03602 Conserved hypothetical protein 95 IR04_RS05675 PF00448 SRP54-type protein, GTPase domain IR04_RS05675 PF02881 SRP54-type protein, helical bundle domain IR04_RS05680 PF00005 ABC transporter IR04_RS05685 PF02687 IR04_RS05685 IR04_RS05690 PF00140 Sigma-70 factor, region 1 IR04_RS05690 PF04542 Sigma-70 region 2 IR04_RS05690 PF04545 Sigma-70, region 4 IR04_RS05695 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IR04_RS05695 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR04_RS05700 PF00440 Bacterial regulatory proteins, tetR family IR04_RS05705 PF07226 IR04_RS05705 IR04_RS05710 PF05958 tRNA (Uracil-5-)-methyltransferase IR04_RS05715 PF00593 TonB dependent receptor IR04_RS05715 PF07715 TonB-dependent Receptor Plug Domain IR04_RS05720 PF00082 Subtilase family IR04_RS05720 PF04151 Bacterial pre-peptidase C-terminal domain IR04_RS05720 PF05922 Peptidase inhibitor I9 IR04_RS05725 PF01177 Asp/Glu/Hydantoin racemase IR04_RS05730 PF00076 RNA recognition motif IR04_RS05760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS05760 PF03466 LysR substrate binding domain IR04_RS05765 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IR04_RS05765 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain IR04_RS05770 PF04380 IR04_RS05770 IR04_RS05775 PF00873 AcrB/AcrD/AcrF family IR04_RS05780 PF16576 IR04_RS05780 IR04_RS05785 PF00440 Bacterial regulatory proteins, tetR family IR04_RS05790 PF00580 UvrD/REP helicase N-terminal domain IR04_RS05790 PF13361 UvrD-like helicase C-terminal domain IR04_RS05795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IR04_RS05835 PF00005 ABC transporter IR04_RS05835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR04_RS05840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR04_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS05850 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS05850 PF12911 IR04_RS05850 IR04_RS05855 PF05036 Sporulation related domain IR04_RS05860 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IR04_RS05870 PF12844 Helix-turn-helix domain IR04_RS05885 PF01734 Patatin-like phospholipase IR04_RS05895 PF00899 ThiF family IR04_RS05895 PF14461 Prokaryotic E2 family B IR04_RS05900 PF14464 Prokaryotic homologs of the JAB domain IR04_RS05920 PF00589 Phage integrase family IR04_RS05930 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ IR04_RS05935 PF01432 Peptidase family M3 IR04_RS05940 PF00580 UvrD/REP helicase N-terminal domain IR04_RS05940 PF13361 UvrD-like helicase C-terminal domain IR04_RS05945 PF01810 IR04_RS05945 IR04_RS05950 PF02311 AraC-like ligand binding domain IR04_RS05950 PF12833 Helix-turn-helix domain IR04_RS05955 PF01019 Gamma-glutamyltranspeptidase IR04_RS05960 PF00892 EamA-like transporter family IR04_RS05965 PF00270 DEAD/DEAH box helicase IR04_RS05965 PF00271 Helicase conserved C-terminal domain IR04_RS05965 PF00570 HRDC domain IR04_RS05965 PF09382 RQC domain IR04_RS05965 PF16124 IR04_RS05965 IR04_RS05970 PF12305 IR04_RS05970 IR04_RS05980 PF00005 ABC transporter IR04_RS05980 PF00664 ABC transporter transmembrane region IR04_RS05985 PF00593 TonB dependent receptor IR04_RS05985 PF07715 TonB-dependent Receptor Plug Domain IR04_RS05990 PF00005 ABC transporter IR04_RS05995 PF01497 Periplasmic binding protein IR04_RS06000 PF01032 FecCD transport family IR04_RS06005 PF01380 SIS domain IR04_RS06005 PF01418 Helix-turn-helix domain, rpiR family IR04_RS06015 PF13580 SIS domain IR04_RS06020 PF00367 phosphotransferase system, EIIB IR04_RS06020 PF02378 Phosphotransferase system, EIIC IR04_RS06025 PF03350 IR04_RS06025 IR04_RS06030 PF03755 IR04_RS06030 IR04_RS06030 PF08340 IR04_RS06030 IR04_RS06040 PF00156 Phosphoribosyl transferase domain IR04_RS06045 PF03279 IR04_RS06045 IR04_RS06050 PF03279 IR04_RS06050 IR04_RS06055 PF00440 Bacterial regulatory proteins, tetR family IR04_RS06060 PF02441 Flavoprotein IR04_RS06060 PF04127 DNA / pantothenate metabolism flavoprotein IR04_RS06065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS06065 PF00672 HAMP domain IR04_RS06065 PF17200 IR04_RS06065 IR04_RS06070 PF04002 RadC-like JAB domain IR04_RS06075 PF00830 Ribosomal L28 family IR04_RS06080 PF00471 Ribosomal protein L33 IR04_RS06090 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IR04_RS06090 PF06827 Zinc finger found in FPG and IleRS IR04_RS06090 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IR04_RS06095 PF01467 Cytidylyltransferase IR04_RS06100 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IR04_RS06105 PF00535 Glycosyl transferase family 2 IR04_RS06110 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IR04_RS06115 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family IR04_RS06120 PF07507 IR04_RS06120 IR04_RS06125 PF07507 IR04_RS06125 IR04_RS06140 PF08282 haloacid dehalogenase-like hydrolase IR04_RS06145 PF00534 Glycosyl transferases group 1 IR04_RS06145 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IR04_RS06150 PF04488 Glycosyltransferase sugar-binding region containing DXD motif IR04_RS06155 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IR04_RS06160 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IR04_RS06165 PF04932 IR04_RS06165 IR04_RS06170 PF00132 Bacterial transferase hexapeptide (six repeats) IR04_RS06175 PF01522 Polysaccharide deacetylase IR04_RS06175 PF13439 Glycosyltransferase Family 4 IR04_RS06180 PF01370 NAD dependent epimerase/dehydratase family IR04_RS06185 PF00483 Nucleotidyl transferase IR04_RS06185 PF01050 Mannose-6-phosphate isomerase IR04_RS06190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IR04_RS06190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IR04_RS06190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IR04_RS06190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IR04_RS06195 PF16363 IR04_RS06195 IR04_RS06200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IR04_RS06205 PF00534 Glycosyl transferases group 1 IR04_RS06210 PF01061 IR04_RS06210 IR04_RS06215 PF00005 ABC transporter IR04_RS06220 PF00550 Phosphopantetheine attachment site IR04_RS06225 PF00501 AMP-binding enzyme IR04_RS06225 PF13193 AMP-binding enzyme C-terminal domain IR04_RS06230 PF00465 Iron-containing alcohol dehydrogenase IR04_RS06235 PF04443 IR04_RS06235 IR04_RS06235 PF05893 Acyl-CoA reductase (LuxC) IR04_RS06240 PF00132 Bacterial transferase hexapeptide (six repeats) IR04_RS06245 PF13808 IR04_RS06245 IR04_RS06255 PF05575 IR04_RS06255 IR04_RS06260 PF00534 Glycosyl transferases group 1 IR04_RS06260 PF13439 Glycosyltransferase Family 4 IR04_RS06265 PF02719 Polysaccharide biosynthesis protein IR04_RS06270 PF01370 NAD dependent epimerase/dehydratase family IR04_RS06275 PF02397 IR04_RS06275 IR04_RS06280 PF00753 Metallo-beta-lactamase superfamily IR04_RS06280 PF07521 RNA-metabolising metallo-beta-lactamase IR04_RS06280 PF10996 Beta-Casp domain IR04_RS06285 PF00924 Mechanosensitive ion channel IR04_RS06290 PF03167 Uracil DNA glycosylase superfamily IR04_RS06295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IR04_RS06300 PF04222 Protein of unknown function (DUF416) IR04_RS06305 PF01238 Phosphomannose isomerase type I IR04_RS06310 PF00480 ROK family IR04_RS06315 PF00571 CBS domain IR04_RS06315 PF01595 IR04_RS06315 IR04_RS06325 PF00216 Bacterial DNA-binding protein IR04_RS06330 PF07356 IR04_RS06330 IR04_RS06335 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IR04_RS06335 PF02843 Phosphoribosylglycinamide synthetase, C domain IR04_RS06335 PF02844 Phosphoribosylglycinamide synthetase, N domain IR04_RS06340 PF01808 AICARFT/IMPCHase bienzyme IR04_RS06340 PF02142 MGS-like domain IR04_RS06350 PF13411 MerR HTH family regulatory protein IR04_RS06355 PF00486 Transcriptional regulatory protein, C terminal IR04_RS06360 PF13520 Amino acid permease IR04_RS06365 PF01276 Orn/Lys/Arg decarboxylase, major domain IR04_RS06365 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain IR04_RS06365 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain IR04_RS06370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS06370 PF00672 HAMP domain IR04_RS06370 PF17200 IR04_RS06370 IR04_RS06375 PF16357 IR04_RS06375 IR04_RS06380 PF00593 TonB dependent receptor IR04_RS06385 PF07715 TonB-dependent Receptor Plug Domain IR04_RS06390 PF01081 KDPG and KHG aldolase IR04_RS06395 PF02447 IR04_RS06395 IR04_RS06400 PF01202 Shikimate kinase IR04_RS06405 PF00920 Dehydratase family IR04_RS06410 PF00356 Bacterial regulatory proteins, lacI family IR04_RS06410 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IR04_RS06415 PF02954 Bacterial regulatory protein, Fis family IR04_RS06420 PF01207 Dihydrouridine synthase (Dus) IR04_RS06425 PF06325 Ribosomal protein L11 methyltransferase (PrmA) IR04_RS06430 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain IR04_RS06430 PF02785 Biotin carboxylase C-terminal domain IR04_RS06430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IR04_RS06435 PF00364 Biotin-requiring enzyme IR04_RS06440 PF01220 Dehydroquinase class II IR04_RS06445 PF00501 AMP-binding enzyme IR04_RS06445 PF13193 AMP-binding enzyme C-terminal domain IR04_RS06445 PF16177 IR04_RS06445 IR04_RS06450 PF00929 Exonuclease IR04_RS06455 PF00027 Cyclic nucleotide-binding domain IR04_RS06455 PF03445 IR04_RS06455 IR04_RS06455 PF10335 IR04_RS06455 IR04_RS06465 PF12832 MFS_1 like family IR04_RS06470 PF00072 Response regulator receiver domain IR04_RS06470 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS06470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS06470 PF12860 IR04_RS06470 IR04_RS06475 PF02541 Ppx/GppA phosphatase family IR04_RS06480 PF00270 DEAD/DEAH box helicase IR04_RS06480 PF00271 Helicase conserved C-terminal domain IR04_RS06485 PF00085 Thioredoxin IR04_RS06490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IR04_RS06490 PF07497 Rho termination factor, RNA-binding domain IR04_RS06490 PF07498 Rho termination factor, N-terminal domain IR04_RS06500 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IR04_RS06505 PF00111 2Fe-2S iron-sulfur cluster binding domain IR04_RS06510 PF00175 Oxidoreductase NAD-binding domain IR04_RS06510 PF00970 Oxidoreductase FAD-binding domain IR04_RS06545 PF13091 PLD-like domain IR04_RS06555 PF13508 Acetyltransferase (GNAT) domain IR04_RS06560 PF01565 FAD binding domain IR04_RS06560 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IR04_RS06565 PF02237 Biotin protein ligase C terminal domain IR04_RS06565 PF03099 Biotin/lipoate A/B protein ligase family IR04_RS06565 PF08279 HTH domain IR04_RS06570 PF00485 Phosphoribulokinase / Uridine kinase family IR04_RS06595 PF00009 Elongation factor Tu GTP binding domain IR04_RS06595 PF03143 Elongation factor Tu C-terminal domain IR04_RS06595 PF03144 Elongation factor Tu domain 2 IR04_RS06600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IR04_RS06605 PF00467 KOW motif IR04_RS06605 PF02357 Transcription termination factor nusG IR04_RS06610 PF00298 Ribosomal protein L11, RNA binding domain IR04_RS06610 PF03946 Ribosomal protein L11, N-terminal domain IR04_RS06615 PF00687 Ribosomal protein L1p/L10e family IR04_RS06620 PF00466 Ribosomal protein L10 IR04_RS06625 PF00542 Ribosomal protein L7/L12 C-terminal domain IR04_RS06625 PF16320 IR04_RS06625 IR04_RS06630 PF00562 RNA polymerase Rpb2, domain 6 IR04_RS06630 PF04560 RNA polymerase Rpb2, domain 7 IR04_RS06630 PF04561 RNA polymerase Rpb2, domain 2 IR04_RS06630 PF04563 RNA polymerase beta subunit IR04_RS06630 PF04565 RNA polymerase Rpb2, domain 3 IR04_RS06630 PF10385 RNA polymerase beta subunit external 1 domain IR04_RS06635 PF00623 RNA polymerase Rpb1, domain 2 IR04_RS06635 PF04983 RNA polymerase Rpb1, domain 3 IR04_RS06635 PF04997 RNA polymerase Rpb1, domain 1 IR04_RS06635 PF04998 RNA polymerase Rpb1, domain 5 IR04_RS06635 PF05000 RNA polymerase Rpb1, domain 4 IR04_RS06640 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IR04_RS06645 PF00293 NUDIX domain IR04_RS06645 PF09297 NADH pyrophosphatase zinc ribbon domain IR04_RS06650 PF01208 Uroporphyrinogen decarboxylase (URO-D) IR04_RS06655 PF00440 Bacterial regulatory proteins, tetR family IR04_RS06655 PF13972 Bacterial transcriptional repressor IR04_RS06665 PF01551 Peptidase family M23 IR04_RS06670 PF01676 Metalloenzyme superfamily IR04_RS06670 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IR04_RS06675 PF00892 EamA-like transporter family IR04_RS06680 PF00939 Sodium:sulfate symporter transmembrane region IR04_RS06685 PF02666 IR04_RS06685 IR04_RS06690 PF03193 Protein of unknown function, DUF258 IR04_RS06695 PF00929 Exonuclease IR04_RS06740 PF08331 IR04_RS06740 IR04_RS06740 PF13484 IR04_RS06740 IR04_RS06745 PF02367 Uncharacterised P-loop hydrolase UPF0079 IR04_RS06750 PF01476 LysM domain IR04_RS06750 PF01520 N-acetylmuramoyl-L-alanine amidase IR04_RS06750 PF11741 AMIN domain IR04_RS06755 PF01119 DNA mismatch repair protein, C-terminal domain IR04_RS06755 PF08676 MutL C terminal dimerisation domain IR04_RS06755 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS06760 PF01715 IPP transferase IR04_RS06770 PF01926 50S ribosome-binding GTPase IR04_RS06770 PF13167 IR04_RS06770 IR04_RS06770 PF16360 IR04_RS06770 IR04_RS06775 PF01145 SPFH domain / Band 7 family IR04_RS06775 PF12221 IR04_RS06775 IR04_RS06780 PF01145 SPFH domain / Band 7 family IR04_RS06785 PF09838 IR04_RS06785 IR04_RS06790 PF04102 SlyX IR04_RS06795 PF00400 WD domain, G-beta repeat IR04_RS06800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR04_RS06800 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IR04_RS06805 PF08348 IR04_RS06805 IR04_RS06805 PF13309 IR04_RS06805 IR04_RS06810 PF02635 DsrE/DsrF-like family IR04_RS06815 PF02635 DsrE/DsrF-like family IR04_RS06820 PF04077 DsrH like protein IR04_RS06825 PF00164 Ribosomal protein S12/S23 IR04_RS06830 PF00177 Ribosomal protein S7p/S5e IR04_RS06835 PF00009 Elongation factor Tu GTP binding domain IR04_RS06835 PF00679 Elongation factor G C-terminus IR04_RS06835 PF03144 Elongation factor Tu domain 2 IR04_RS06835 PF03764 Elongation factor G, domain IV IR04_RS06835 PF14492 Elongation Factor G, domain II IR04_RS06840 PF00009 Elongation factor Tu GTP binding domain IR04_RS06840 PF03143 Elongation factor Tu C-terminal domain IR04_RS06840 PF03144 Elongation factor Tu domain 2 IR04_RS06845 PF04324 BFD-like [2Fe-2S] binding domain IR04_RS06850 PF00210 Ferritin-like domain IR04_RS06855 PF01250 Ribosomal protein S6 IR04_RS06860 PF00436 Single-strand binding protein family IR04_RS06865 PF01084 Ribosomal protein S18 IR04_RS06870 PF01281 Ribosomal protein L9, N-terminal domain IR04_RS06870 PF03948 Ribosomal protein L9, C-terminal domain IR04_RS06875 PF04338 Protein of unknown function, DUF481 IR04_RS06880 PF00772 DnaB-like helicase N terminal domain IR04_RS06880 PF03796 DnaB-like helicase C terminal domain IR04_RS06885 PF00842 Alanine racemase, C-terminal domain IR04_RS06885 PF01168 Alanine racemase, N-terminal domain IR04_RS06890 PF01894 Uncharacterised protein family UPF0047 IR04_RS06895 PF00342 Phosphoglucose isomerase IR04_RS06900 PF12706 Beta-lactamase superfamily domain IR04_RS06905 PF13690 Chemotaxis phosphatase CheX IR04_RS06910 PF01475 Ferric uptake regulator family IR04_RS06915 PF01207 Dihydrouridine synthase (Dus) IR04_RS06920 PF09583 IR04_RS06920 IR04_RS06925 PF13505 Outer membrane protein beta-barrel domain IR04_RS06940 PF00175 Oxidoreductase NAD-binding domain IR04_RS06940 PF00258 Flavodoxin IR04_RS06940 PF00667 FAD binding domain IR04_RS06945 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IR04_RS06945 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IR04_RS06950 PF01507 Phosphoadenosine phosphosulfate reductase family IR04_RS06985 PF00999 Sodium/hydrogen exchanger family IR04_RS06990 PF00809 Pterin binding enzyme IR04_RS06990 PF02310 B12 binding domain IR04_RS06990 PF02574 Homocysteine S-methyltransferase IR04_RS06990 PF02607 B12 binding domain IR04_RS06990 PF02965 Vitamin B12 dependent methionine synthase, activation domain IR04_RS06995 PF00696 Amino acid kinase family IR04_RS07000 PF00266 Aminotransferase class-V IR04_RS07005 PF04932 IR04_RS07005 IR04_RS07005 PF11846 IR04_RS07005 IR04_RS07005 PF15864 IR04_RS07005 IR04_RS07010 PF00005 ABC transporter IR04_RS07020 PF00196 Bacterial regulatory proteins, luxR family IR04_RS07025 PF00436 Single-strand binding protein family IR04_RS07030 PF00563 EAL domain IR04_RS07030 PF00990 GGDEF domain IR04_RS07030 PF17157 IR04_RS07030 IR04_RS07040 PF04612 Type II secretion system (T2SS), protein M IR04_RS07050 PF00263 IR04_RS07050 IR04_RS07050 PF07655 IR04_RS07050 IR04_RS07055 PF13401 AAA domain IR04_RS07060 PF14559 Tetratricopeptide repeat IR04_RS07065 PF00437 Type II/IV secretion system protein IR04_RS07065 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IR04_RS07070 PF00482 Type II secretion system (T2SS), protein F IR04_RS07080 PF13633 Prokaryotic N-terminal methylation site IR04_RS07085 PF13633 Prokaryotic N-terminal methylation site IR04_RS07090 PF07963 Prokaryotic N-terminal methylation motif IR04_RS07095 PF13633 Prokaryotic N-terminal methylation site IR04_RS07100 PF07963 Prokaryotic N-terminal methylation motif IR04_RS07115 PF06723 MreB/Mbl protein IR04_RS07120 PF04085 rod shape-determining protein MreC IR04_RS07125 PF04093 IR04_RS07125 IR04_RS07130 PF02545 Maf-like protein IR04_RS07135 PF00575 S1 RNA binding domain IR04_RS07135 PF10150 Ribonuclease E/G family IR04_RS07140 PF13116 IR04_RS07140 IR04_RS07140 PF13502 IR04_RS07140 IR04_RS07145 PF00795 Carbon-nitrogen hydrolase IR04_RS07150 PF01523 Putative modulator of DNA gyrase IR04_RS07155 PF02274 Amidinotransferase IR04_RS07160 PF06877 Regulator of ribonuclease activity B IR04_RS07170 PF09834 IR04_RS07170 IR04_RS07175 PF00582 Universal stress protein family IR04_RS07185 PF16868 IR04_RS07185 IR04_RS07190 PF01316 Arginine repressor, DNA binding domain IR04_RS07190 PF02863 Arginine repressor, C-terminal domain IR04_RS07195 PF00056 lactate/malate dehydrogenase, NAD binding domain IR04_RS07195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IR04_RS07200 PF13520 Amino acid permease IR04_RS07205 PF13520 Amino acid permease IR04_RS07210 PF00348 Polyprenyl synthetase IR04_RS07215 PF00829 Ribosomal prokaryotic L21 protein IR04_RS07220 PF01016 Ribosomal L27 protein IR04_RS07225 PF01018 GTP1/OBG IR04_RS07225 PF01926 50S ribosome-binding GTPase IR04_RS07230 PF06738 IR04_RS07230 IR04_RS07235 PF12821 IR04_RS07235 IR04_RS07240 PF00186 Dihydrofolate reductase IR04_RS07245 PF00149 Calcineurin-like phosphoesterase IR04_RS07250 PF04379 Protein of unknown function (DUF525) IR04_RS07255 PF00398 Ribosomal RNA adenine dimethylase IR04_RS07260 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IR04_RS07265 PF09312 SurA N-terminal domain IR04_RS07265 PF13616 PPIC-type PPIASE domain IR04_RS07270 PF03968 OstA-like protein IR04_RS07270 PF04453 Organic solvent tolerance protein IR04_RS07275 PF00226 DnaJ domain IR04_RS07275 PF05099 Tellurite resistance protein TerB IR04_RS07305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS07305 PF17200 IR04_RS07305 IR04_RS07330 PF01464 Transglycosylase SLT domain IR04_RS07330 PF11873 Domain of unknown function (DUF3393) IR04_RS07335 PF04362 Bacterial Fe(2+) trafficking IR04_RS07340 PF00633 Helix-hairpin-helix motif IR04_RS07340 PF00730 HhH-GPD superfamily base excision DNA repair protein IR04_RS07340 PF14815 NUDIX domain IR04_RS07345 PF02390 Putative methyltransferase IR04_RS07350 PF04960 Glutaminase IR04_RS07355 PF04055 Radical SAM superfamily IR04_RS07355 PF06969 HemN C-terminal domain IR04_RS07360 PF01725 Ham1 family IR04_RS07365 PF14467 Domain of unknown function (DUF4426) IR04_RS07370 PF02594 Uncharacterised ACR, YggU family COG1872 IR04_RS07375 PF02325 IR04_RS07375 IR04_RS07380 PF03807 NADP oxidoreductase coenzyme F420-dependent IR04_RS07380 PF14748 Pyrroline-5-carboxylate reductase dimerisation IR04_RS07385 PF01168 Alanine racemase, N-terminal domain IR04_RS07390 PF00437 Type II/IV secretion system protein IR04_RS07395 PF00437 Type II/IV secretion system protein IR04_RS07400 PF00196 Bacterial regulatory proteins, luxR family IR04_RS07405 PF00579 tRNA synthetases class I (W and Y) IR04_RS07405 PF01479 S4 domain IR04_RS07410 PF03652 Uncharacterised protein family (UPF0081) IR04_RS07415 PF02622 Uncharacterized ACR, COG1678 IR04_RS07420 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IR04_RS07420 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IR04_RS07425 PF04452 RNA methyltransferase IR04_RS07430 PF04231 Endonuclease I IR04_RS07435 PF10263 IR04_RS07435 IR04_RS07440 PF00438 S-adenosylmethionine synthetase, N-terminal domain IR04_RS07440 PF02772 S-adenosylmethionine synthetase, central domain IR04_RS07440 PF02773 S-adenosylmethionine synthetase, C-terminal domain IR04_RS07450 PF00456 Transketolase, thiamine diphosphate binding domain IR04_RS07450 PF02779 Transketolase, pyrimidine binding domain IR04_RS07450 PF02780 Transketolase, C-terminal domain IR04_RS07455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS07455 PF03466 LysR substrate binding domain IR04_RS07460 PF00593 TonB dependent receptor IR04_RS07460 PF07715 TonB-dependent Receptor Plug Domain IR04_RS07465 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IR04_RS07465 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IR04_RS07470 PF00162 Phosphoglycerate kinase IR04_RS07475 PF01116 Fructose-bisphosphate aldolase class-II IR04_RS07485 PF00924 Mechanosensitive ion channel IR04_RS07485 PF05552 Conserved TM helix IR04_RS07490 PF01810 IR04_RS07490 IR04_RS07495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS07495 PF03466 LysR substrate binding domain IR04_RS07500 PF04402 Protein of unknown function (DUF541) IR04_RS07505 PF00224 Pyruvate kinase, barrel domain IR04_RS07505 PF02887 Pyruvate kinase, alpha/beta domain IR04_RS07510 PF00455 IR04_RS07510 IR04_RS07510 PF08220 DeoR-like helix-turn-helix domain IR04_RS07515 PF01380 SIS domain IR04_RS07515 PF13522 Glutamine amidotransferase domain IR04_RS07520 PF03480 Bacterial extracellular solute-binding protein, family 7 IR04_RS07525 PF01553 Acyltransferase IR04_RS07525 PF13444 Acetyltransferase (GNAT) domain IR04_RS07530 PF12532 IR04_RS07530 IR04_RS07550 PF11726 IR04_RS07550 IR04_RS07560 PF01527 Transposase IR04_RS07565 PF12833 Helix-turn-helix domain IR04_RS07575 PF00563 EAL domain IR04_RS07575 PF08668 HDOD domain IR04_RS07580 PF00589 Phage integrase family IR04_RS07580 PF13356 Domain of unknown function (DUF4102) IR04_RS07580 PF14659 Phage integrase, N-terminal SAM-like domain IR04_RS07590 PF00140 Sigma-70 factor, region 1 IR04_RS07590 PF03979 Sigma-70 factor, region 1 IR04_RS07590 PF04539 Sigma-70 region 3 IR04_RS07590 PF04542 Sigma-70 region 2 IR04_RS07590 PF04545 Sigma-70, region 4 IR04_RS07590 PF04546 Sigma-70, non-essential region IR04_RS07595 PF01807 CHC2 zinc finger IR04_RS07595 PF08275 DNA primase catalytic core, N-terminal domain IR04_RS07595 PF08278 DNA primase DnaG DnaB-binding IR04_RS07595 PF10410 DnaB-helicase binding domain of primase IR04_RS07595 PF13155 Toprim-like IR04_RS07600 PF09424 Yqey-like protein IR04_RS07605 PF01165 Ribosomal protein S21 IR04_RS07610 PF00814 Glycoprotease family IR04_RS07615 PF00561 alpha/beta hydrolase fold IR04_RS07620 PF02660 IR04_RS07620 IR04_RS07625 PF02152 Dihydroneopterin aldolase IR04_RS07630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IR04_RS07635 PF02673 IR04_RS07635 IR04_RS07640 PF04977 Septum formation initiator IR04_RS07645 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IR04_RS07650 PF02542 YgbB family IR04_RS07655 PF01142 tRNA pseudouridine synthase D (TruD) IR04_RS07660 PF01975 Survival protein SurE IR04_RS07665 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) IR04_RS07670 PF01476 LysM domain IR04_RS07670 PF01551 Peptidase family M23 IR04_RS07680 PF00488 MutS domain V IR04_RS07680 PF01624 MutS domain I IR04_RS07680 PF05188 MutS domain II IR04_RS07680 PF05190 MutS family domain IV IR04_RS07680 PF05192 MutS domain III IR04_RS07685 PF00291 Pyridoxal-phosphate dependent enzyme IR04_RS07690 PF13531 Bacterial extracellular solute-binding protein IR04_RS07695 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS07700 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS07705 PF00005 ABC transporter IR04_RS07705 PF12857 IR04_RS07705 IR04_RS07710 PF02464 Competence-damaged protein IR04_RS07715 PF00154 recA bacterial DNA recombination protein IR04_RS07720 PF02631 RecX family IR04_RS07725 PF01411 tRNA synthetases class II (A) IR04_RS07725 PF02272 DHHA1 domain IR04_RS07725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IR04_RS07730 PF00696 Amino acid kinase family IR04_RS07735 PF02599 Global regulator protein family IR04_RS07785 PF04277 IR04_RS07785 IR04_RS07790 PF00364 Biotin-requiring enzyme IR04_RS07790 PF00682 HMGL-like IR04_RS07790 PF02436 Conserved carboxylase domain IR04_RS07795 PF03977 IR04_RS07795 IR04_RS07800 PF08240 Alcohol dehydrogenase GroES-like domain IR04_RS07800 PF13602 Zinc-binding dehydrogenase IR04_RS07805 PF09335 IR04_RS07805 IR04_RS07810 PF00675 Insulinase (Peptidase family M16) IR04_RS07810 PF05193 Peptidase M16 inactive domain IR04_RS07815 PF04262 Glutamate-cysteine ligase IR04_RS07820 PF02664 S-Ribosylhomocysteinase (LuxS) IR04_RS07825 PF00571 CBS domain IR04_RS07825 PF01595 IR04_RS07825 IR04_RS07825 PF03471 Transporter associated domain IR04_RS07830 PF01578 IR04_RS07830 IR04_RS07835 PF00448 SRP54-type protein, GTPase domain IR04_RS07835 PF02881 SRP54-type protein, helical bundle domain IR04_RS07835 PF02978 Signal peptide binding domain IR04_RS07840 PF00886 Ribosomal protein S16 IR04_RS07845 PF01782 RimM N-terminal domain IR04_RS07845 PF05239 PRC-barrel domain IR04_RS07850 PF01746 tRNA (Guanine-1)-methyltransferase IR04_RS07855 PF01245 Ribosomal protein L19 IR04_RS07860 PF13180 PDZ domain IR04_RS07860 PF13365 Trypsin-like peptidase domain IR04_RS07870 PF06295 IR04_RS07870 IR04_RS07875 PF03969 AFG1-like ATPase IR04_RS07885 PF00572 Ribosomal protein L13 IR04_RS07890 PF00380 Ribosomal protein S9/S16 IR04_RS07895 PF00355 Rieske [2Fe-2S] domain IR04_RS07895 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IR04_RS07905 PF02167 Cytochrome C1 family IR04_RS07910 PF00043 Glutathione S-transferase, C-terminal domain IR04_RS07910 PF13417 Glutathione S-transferase, N-terminal domain IR04_RS07915 PF04386 Stringent starvation protein B IR04_RS07920 PF04972 BON domain IR04_RS07925 PF13580 SIS domain IR04_RS07930 PF02021 Uncharacterised protein family UPF0102 IR04_RS07935 PF04348 LppC putative lipoprotein IR04_RS07940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IR04_RS07945 PF00440 Bacterial regulatory proteins, tetR family IR04_RS07950 PF00156 Phosphoribosyl transferase domain IR04_RS07955 PF00484 Carbonic anhydrase IR04_RS07960 PF00916 IR04_RS07960 IR04_RS07960 PF01740 STAS domain IR04_RS07965 PF00005 ABC transporter IR04_RS07970 PF01061 IR04_RS07970 IR04_RS07975 PF02569 Pantoate-beta-alanine ligase IR04_RS07980 PF02548 Ketopantoate hydroxymethyltransferase IR04_RS07985 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IR04_RS07990 PF01743 Poly A polymerase head domain IR04_RS07990 PF12626 Polymerase A arginine-rich C-terminus IR04_RS07990 PF12627 Probable RNA and SrmB- binding site of polymerase A IR04_RS07995 PF00749 tRNA synthetases class I (E and Q), catalytic domain IR04_RS08000 PF01258 Prokaryotic dksA/traR C4-type zinc finger IR04_RS08005 PF03749 Sugar fermentation stimulation protein IR04_RS08010 PF12697 Alpha/beta hydrolase family IR04_RS08015 PF00270 DEAD/DEAH box helicase IR04_RS08015 PF00271 Helicase conserved C-terminal domain IR04_RS08015 PF04408 Helicase associated domain (HA2) IR04_RS08015 PF08482 IR04_RS08015 IR04_RS08020 PF00905 Penicillin binding protein transpeptidase domain IR04_RS08020 PF00912 Transglycosylase IR04_RS08020 PF14814 Bifunctional transglycosylase second domain IR04_RS08025 PF01734 Patatin-like phospholipase IR04_RS08025 PF07244 Surface antigen variable number repeat IR04_RS08030 PF00330 Aconitase family (aconitate hydratase) IR04_RS08030 PF06434 Aconitate hydratase 2 N-terminus IR04_RS08030 PF11791 Aconitate B N-terminal domain IR04_RS08035 PF06062 IR04_RS08035 IR04_RS08040 PF00543 Nitrogen regulatory protein P-II IR04_RS08045 PF00909 Ammonium Transporter Family IR04_RS08050 PF13343 Bacterial extracellular solute-binding protein IR04_RS08055 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS08060 PF00005 ABC transporter IR04_RS08060 PF08402 TOBE domain IR04_RS08065 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IR04_RS08065 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IR04_RS08065 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IR04_RS08065 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IR04_RS08070 PF06165 Glycosyltransferase family 36 IR04_RS08070 PF17167 IR04_RS08070 IR04_RS08075 PF00728 Glycosyl hydrolase family 20, catalytic domain IR04_RS08075 PF02838 Glycosyl hydrolase family 20, domain 2 IR04_RS08080 PF01869 BadF/BadG/BcrA/BcrD ATPase family IR04_RS08085 PF00759 Glycosyl hydrolase family 9 IR04_RS08085 PF02927 N-terminal ig-like domain of cellulase IR04_RS08090 PF00005 ABC transporter IR04_RS08090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR04_RS08095 PF00005 ABC transporter IR04_RS08095 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR04_RS08100 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS08100 PF12911 IR04_RS08100 IR04_RS08105 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS08110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR04_RS08120 PF00072 Response regulator receiver domain IR04_RS08120 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS08120 PF00672 HAMP domain IR04_RS08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS08120 PF13188 PAS domain IR04_RS08125 PF05175 Methyltransferase small domain IR04_RS08125 PF08468 Methyltransferase small domain N-terminal IR04_RS08130 PF01594 IR04_RS08130 IR04_RS08140 PF00202 Aminotransferase class-III IR04_RS08145 PF01521 Iron-sulphur cluster biosynthesis IR04_RS08150 PF16576 IR04_RS08150 IR04_RS08155 PF00873 AcrB/AcrD/AcrF family IR04_RS08160 PF01551 Peptidase family M23 IR04_RS08160 PF08525 IR04_RS08160 IR04_RS08165 PF00579 tRNA synthetases class I (W and Y) IR04_RS08165 PF01479 S4 domain IR04_RS08170 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IR04_RS08175 PF13609 Gram-negative porin IR04_RS08180 PF01272 Transcription elongation factor, GreA/GreB, C-term IR04_RS08180 PF03449 Transcription elongation factor, N-terminal IR04_RS08185 PF01985 CRS1 / YhbY (CRM) domain IR04_RS08190 PF01728 FtsJ-like methyltransferase IR04_RS08195 PF00004 ATPase family associated with various cellular activities (AAA) IR04_RS08195 PF01434 Peptidase family M41 IR04_RS08195 PF06480 FtsH Extracellular IR04_RS08200 PF00809 Pterin binding enzyme IR04_RS08205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IR04_RS08205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IR04_RS08205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IR04_RS08205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IR04_RS08210 PF03840 Preprotein translocase SecG subunit IR04_RS08225 PF02576 Uncharacterised BCR, YhbC family COG0779 IR04_RS08230 PF08529 NusA N-terminal domain IR04_RS08230 PF13184 NusA-like KH domain IR04_RS08230 PF14520 Helix-hairpin-helix domain IR04_RS08235 PF00009 Elongation factor Tu GTP binding domain IR04_RS08235 PF04760 Translation initiation factor IF-2, N-terminal region IR04_RS08235 PF08364 IR04_RS08235 IR04_RS08235 PF11987 Translation-initiation factor 2 IR04_RS08240 PF02033 Ribosome-binding factor A IR04_RS08245 PF01509 TruB family pseudouridylate synthase (N terminal domain) IR04_RS08245 PF09157 Pseudouridine synthase II TruB, C-terminal IR04_RS08245 PF16198 IR04_RS08245 IR04_RS08250 PF00312 Ribosomal protein S15 IR04_RS08255 PF00013 KH domain IR04_RS08255 PF00575 S1 RNA binding domain IR04_RS08255 PF01138 3' exoribonuclease family, domain 1 IR04_RS08255 PF03725 3' exoribonuclease family, domain 2 IR04_RS08255 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IR04_RS08265 PF01047 MarR family IR04_RS08270 PF01554 MatE IR04_RS08275 PF01136 IR04_RS08275 IR04_RS08280 PF01136 IR04_RS08280 IR04_RS08285 PF00563 EAL domain IR04_RS08285 PF00990 GGDEF domain IR04_RS08285 PF08448 PAS fold IR04_RS08285 PF13188 PAS domain IR04_RS08290 PF02036 SCP-2 sterol transfer family IR04_RS08295 PF13527 Acetyltransferase (GNAT) domain IR04_RS08300 PF03603 DNA polymerase III psi subunit IR04_RS08305 PF00583 Acetyltransferase (GNAT) family IR04_RS08310 PF00563 EAL domain IR04_RS08310 PF00990 GGDEF domain IR04_RS08320 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS08325 PF00589 Phage integrase family IR04_RS08325 PF13356 Domain of unknown function (DUF4102) IR04_RS08345 PF00817 impB/mucB/samB family IR04_RS08345 PF11798 IMS family HHH motif IR04_RS08345 PF11799 impB/mucB/samB family C-terminal domain IR04_RS08345 PF13438 IR04_RS08345 IR04_RS08350 PF01526 IR04_RS08350 IR04_RS08355 PF01526 IR04_RS08355 IR04_RS08355 PF13700 IR04_RS08355 IR04_RS08365 PF04986 IR04_RS08365 IR04_RS08365 PF14319 IR04_RS08365 IR04_RS08370 PF11843 IR04_RS08370 IR04_RS08375 PF07690 Major Facilitator Superfamily IR04_RS08380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS08385 PF14319 IR04_RS08385 IR04_RS08390 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase IR04_RS08395 PF01636 Phosphotransferase enzyme family IR04_RS08400 PF00809 Pterin binding enzyme IR04_RS08405 PF13700 IR04_RS08405 IR04_RS08410 PF00872 IR04_RS08410 IR04_RS08420 PF00817 impB/mucB/samB family IR04_RS08425 PF00717 Peptidase S24-like IR04_RS08435 PF00929 Exonuclease IR04_RS08445 PF13280 IR04_RS08445 IR04_RS08450 PF08849 Putative inner membrane protein (DUF1819) IR04_RS08465 PF02384 N-6 DNA Methylase IR04_RS08470 PF08665 IR04_RS08470 IR04_RS08475 PF05362 Lon protease (S16) C-terminal proteolytic domain IR04_RS08475 PF13337 IR04_RS08475 IR04_RS08485 PF14355 IR04_RS08485 IR04_RS08490 PF07514 Putative helicase IR04_RS08495 PF10412 Type IV secretion-system coupling protein DNA-binding domain IR04_RS08495 PF12696 TraM recognition site of TraD and TraG IR04_RS08505 PF14348 IR04_RS08505 IR04_RS08520 PF07178 IR04_RS08520 IR04_RS08525 PF05309 IR04_RS08525 IR04_RS08530 PF06586 IR04_RS08530 IR04_RS08535 PF03743 Bacterial conjugation TrbI-like protein IR04_RS08540 PF09676 IR04_RS08540 IR04_RS08550 PF11459 IR04_RS08550 IR04_RS08550 PF17194 IR04_RS08550 IR04_RS08555 PF08843 Nucleotidyl transferase of unknown function (DUF1814) IR04_RS08560 PF10411 Disulfide bond isomerase protein N-terminus IR04_RS08560 PF13098 Thioredoxin-like domain IR04_RS08565 PF11130 IR04_RS08565 IR04_RS08565 PF12846 AAA-like domain IR04_RS08575 PF10502 Signal peptidase, peptidase S26 IR04_RS08580 PF09673 IR04_RS08580 IR04_RS08585 PF06834 IR04_RS08585 IR04_RS08590 PF06986 IR04_RS08590 IR04_RS08600 PF01695 IstB-like ATP binding protein IR04_RS08605 PF00665 Integrase core domain IR04_RS08610 PF13476 AAA domain IR04_RS08615 PF04231 Endonuclease I IR04_RS08630 PF00436 Single-strand binding protein family IR04_RS08635 PF03837 IR04_RS08635 IR04_RS08640 PF09588 YqaJ-like viral recombinase domain IR04_RS08645 PF07728 AAA domain (dynein-related subfamily) IR04_RS08645 PF08406 IR04_RS08645 IR04_RS08655 PF11348 IR04_RS08655 IR04_RS08665 PF00092 von Willebrand factor type A domain IR04_RS08670 PF04002 RadC-like JAB domain IR04_RS08680 PF08273 Zinc-binding domain of primase-helicase IR04_RS08680 PF13362 Toprim domain IR04_RS08690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IR04_RS08695 PF12833 Helix-turn-helix domain IR04_RS08700 PF08818 Domain of unknown function (DU1801) IR04_RS08705 PF01381 Helix-turn-helix IR04_RS08715 PF00186 Dihydrofolate reductase IR04_RS08720 PF00589 Phage integrase family IR04_RS08720 PF13495 Phage integrase, N-terminal SAM-like domain IR04_RS08725 PF13728 F plasmid transfer operon protein IR04_RS08730 PF06122 IR04_RS08730 IR04_RS08735 PF07916 IR04_RS08735 IR04_RS08745 PF05280 Flagellar transcriptional activator (FlhC) IR04_RS08750 PF05247 Flagellar transcriptional activator (FlhD) IR04_RS08755 PF01464 Transglycosylase SLT domain IR04_RS08770 PF15943 IR04_RS08770 IR04_RS08775 PF00717 Peptidase S24-like IR04_RS08775 PF01381 Helix-turn-helix IR04_RS08780 PF00009 Elongation factor Tu GTP binding domain IR04_RS08780 PF03144 Elongation factor Tu domain 2 IR04_RS08780 PF16658 IR04_RS08780 IR04_RS08785 PF00270 DEAD/DEAH box helicase IR04_RS08785 PF00271 Helicase conserved C-terminal domain IR04_RS08790 PF05175 Methyltransferase small domain IR04_RS08795 PF05525 IR04_RS08795 IR04_RS08800 PF00472 RF-1 domain IR04_RS08800 PF03462 PCRF domain IR04_RS08805 PF00152 tRNA synthetases class II (D, K and N) IR04_RS08805 PF01336 OB-fold nucleic acid binding domain IR04_RS08810 PF00158 Sigma-54 interaction domain IR04_RS08810 PF02954 Bacterial regulatory protein, Fis family IR04_RS08820 PF00248 Aldo/keto reductase family IR04_RS08825 PF02976 DNA mismatch repair enzyme MutH IR04_RS08835 PF00293 NUDIX domain IR04_RS08840 PF00391 PEP-utilising enzyme, mobile domain IR04_RS08840 PF01590 GAF domain IR04_RS08840 PF02896 PEP-utilising enzyme, TIM barrel domain IR04_RS08840 PF05524 PEP-utilising enzyme, N-terminal IR04_RS08845 PF01925 IR04_RS08845 IR04_RS08850 PF01790 IR04_RS08850 IR04_RS08855 PF00303 Thymidylate synthase IR04_RS08865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS08865 PF03466 LysR substrate binding domain IR04_RS08870 PF01022 Bacterial regulatory protein, arsR family IR04_RS08875 PF01649 Ribosomal protein S20 IR04_RS08880 PF03023 IR04_RS08880 IR04_RS08885 PF01687 Riboflavin kinase IR04_RS08885 PF06574 FAD synthetase IR04_RS08890 PF00133 tRNA synthetases class I (I, L, M and V) IR04_RS08890 PF06827 Zinc finger found in FPG and IleRS IR04_RS08890 PF08264 Anticodon-binding domain of tRNA IR04_RS08895 PF01252 IR04_RS08895 IR04_RS08900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR04_RS08905 PF02401 LytB protein IR04_RS08910 PF02554 IR04_RS08910 IR04_RS08910 PF13722 IR04_RS08910 IR04_RS08915 PF10973 IR04_RS08915 IR04_RS08920 PF00999 Sodium/hydrogen exchanger family IR04_RS08920 PF02254 TrkA-N domain IR04_RS08925 PF13580 SIS domain IR04_RS08930 PF03702 Uncharacterised protein family (UPF0075) IR04_RS08935 PF00933 Glycosyl hydrolase family 3 N terminal domain IR04_RS08940 PF00072 Response regulator receiver domain IR04_RS08940 PF04397 LytTr DNA-binding domain IR04_RS08945 PF06580 IR04_RS08945 IR04_RS08945 PF07694 5TMR of 5TMR-LYT IR04_RS08945 PF13492 GAF domain IR04_RS08950 PF00793 DAHP synthetase I family IR04_RS08955 PF01817 Chorismate mutase type II IR04_RS08955 PF02153 Prephenate dehydrogenase IR04_RS08960 PF07238 PilZ domain IR04_RS08965 PF00005 ABC transporter IR04_RS08965 PF12848 ABC transporter IR04_RS08970 PF01464 Transglycosylase SLT domain IR04_RS08970 PF14718 Soluble lytic murein transglycosylase L domain IR04_RS08975 PF01371 Trp repressor protein IR04_RS08980 PF01931 Protein of unknown function DUF84 IR04_RS08985 PF00563 EAL domain IR04_RS08985 PF00672 HAMP domain IR04_RS08985 PF00990 GGDEF domain IR04_RS08990 PF13416 Bacterial extracellular solute-binding protein IR04_RS08995 PF00800 Prephenate dehydratase IR04_RS08995 PF01817 Chorismate mutase type II IR04_RS09000 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IR04_RS09005 PF13525 Outer membrane lipoprotein IR04_RS09010 PF00849 RNA pseudouridylate synthase IR04_RS09010 PF01479 S4 domain IR04_RS09015 PF02578 Multi-copper polyphenol oxidoreductase laccase IR04_RS09020 PF00004 ATPase family associated with various cellular activities (AAA) IR04_RS09020 PF02861 Clp amino terminal domain IR04_RS09020 PF07724 AAA domain (Cdc48 subfamily) IR04_RS09020 PF10431 C-terminal, D2-small domain, of ClpB protein IR04_RS09050 PF08921 Domain of unknown function (DUF1904) IR04_RS09055 PF00881 Nitroreductase family IR04_RS09060 PF12838 4Fe-4S dicluster domain IR04_RS09065 PF01136 IR04_RS09065 IR04_RS09065 PF16325 IR04_RS09065 IR04_RS09070 PF04381 Putative exonuclease, RdgC IR04_RS09075 PF00072 Response regulator receiver domain IR04_RS09075 PF00486 Transcriptional regulatory protein, C terminal IR04_RS09080 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS09080 PF00989 PAS fold IR04_RS09080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS09080 PF11808 IR04_RS09080 IR04_RS09085 PF12849 PBP superfamily domain IR04_RS09090 PF02541 Ppx/GppA phosphatase family IR04_RS09095 PF02503 Polyphosphate kinase middle domain IR04_RS09095 PF13089 Polyphosphate kinase N-terminal domain IR04_RS09095 PF13090 Polyphosphate kinase C-terminal domain IR04_RS09100 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS09105 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS09110 PF00005 ABC transporter IR04_RS09115 PF01895 PhoU domain IR04_RS09120 PF03976 Polyphosphate kinase 2 (PPK2) IR04_RS09125 PF03932 CutC family IR04_RS09130 PF00578 AhpC/TSA family IR04_RS09130 PF10417 C-terminal domain of 1-Cys peroxiredoxin IR04_RS09135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS09135 PF03466 LysR substrate binding domain IR04_RS09140 PF01274 Malate synthase IR04_RS09145 PF00463 Isocitrate lyase family IR04_RS09150 PF00571 CBS domain IR04_RS09155 PF02547 Queuosine biosynthesis protein IR04_RS09165 PF01702 Queuine tRNA-ribosyltransferase IR04_RS09170 PF02699 Preprotein translocase subunit IR04_RS09175 PF02355 Protein export membrane protein IR04_RS09175 PF07549 SecD/SecF GG Motif IR04_RS09175 PF13721 SecD export protein N-terminal TM region IR04_RS09180 PF02355 Protein export membrane protein IR04_RS09180 PF07549 SecD/SecF GG Motif IR04_RS09185 PF00459 Inositol monophosphatase family IR04_RS09190 PF00588 SpoU rRNA Methylase family IR04_RS09195 PF02082 Transcriptional regulator IR04_RS09200 PF00266 Aminotransferase class-V IR04_RS09205 PF01592 NifU-like N terminal domain IR04_RS09210 PF01521 Iron-sulphur cluster biosynthesis IR04_RS09215 PF00226 DnaJ domain IR04_RS09215 PF07743 HSCB C-terminal oligomerisation domain IR04_RS09220 PF00012 Hsp70 protein IR04_RS09225 PF00111 2Fe-2S iron-sulfur cluster binding domain IR04_RS09230 PF04384 Iron-sulphur cluster assembly IR04_RS09235 PF00883 Cytosol aminopeptidase family, catalytic domain IR04_RS09235 PF12404 IR04_RS09235 IR04_RS09240 PF00334 Nucleoside diphosphate kinase IR04_RS09245 PF04055 Radical SAM superfamily IR04_RS09250 PF13413 Helix-turn-helix domain IR04_RS09250 PF13464 IR04_RS09250 IR04_RS09255 PF04551 GcpE protein IR04_RS09260 PF03129 Anticodon binding domain IR04_RS09260 PF13393 Histidyl-tRNA synthetase IR04_RS09265 PF09976 Tetratricopeptide repeat IR04_RS09270 PF13360 PQQ-like domain IR04_RS09275 PF01926 50S ribosome-binding GTPase IR04_RS09275 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IR04_RS09285 PF07191 zinc-ribbons IR04_RS09290 PF02601 IR04_RS09290 IR04_RS09290 PF13742 IR04_RS09290 IR04_RS09295 PF00478 IMP dehydrogenase / GMP reductase domain IR04_RS09295 PF00571 CBS domain IR04_RS09300 PF00117 Glutamine amidotransferase class-I IR04_RS09300 PF00958 GMP synthase C terminal domain IR04_RS09300 PF02540 NAD synthase IR04_RS09305 PF00182 Chitinase class I IR04_RS09305 PF02839 Carbohydrate binding domain IR04_RS09310 PF01184 IR04_RS09310 IR04_RS09315 PF00550 Phosphopantetheine attachment site IR04_RS09315 PF00857 Isochorismatase family IR04_RS09320 PF00501 AMP-binding enzyme IR04_RS09320 PF13193 AMP-binding enzyme C-terminal domain IR04_RS09325 PF00425 chorismate binding enzyme IR04_RS09330 PF13561 Enoyl-(Acyl carrier protein) reductase IR04_RS09335 PF00668 Condensation domain IR04_RS09340 PF01497 Periplasmic binding protein IR04_RS09345 PF01032 FecCD transport family IR04_RS09350 PF01032 FecCD transport family IR04_RS09355 PF00005 ABC transporter IR04_RS09360 PF01648 4'-phosphopantetheinyl transferase superfamily IR04_RS09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS09365 PF03466 LysR substrate binding domain IR04_RS09370 PF00753 Metallo-beta-lactamase superfamily IR04_RS09370 PF14863 Alkyl sulfatase dimerisation IR04_RS09370 PF14864 Alkyl sulfatase C-terminal IR04_RS09375 PF01235 IR04_RS09375 IR04_RS09380 PF01266 FAD dependent oxidoreductase IR04_RS09385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS09385 PF03466 LysR substrate binding domain IR04_RS09390 PF08883 Dopa 4,5-dioxygenase family IR04_RS09400 PF00072 Response regulator receiver domain IR04_RS09400 PF12431 IR04_RS09400 IR04_RS09405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS09405 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IR04_RS09405 PF17203 IR04_RS09405 IR04_RS09410 PF03977 IR04_RS09410 IR04_RS09415 PF00364 Biotin-requiring enzyme IR04_RS09415 PF00682 HMGL-like IR04_RS09415 PF02436 Conserved carboxylase domain IR04_RS09420 PF04277 IR04_RS09420 IR04_RS09425 PF03390 IR04_RS09425 IR04_RS09430 PF08218 Citrate lyase ligase C-terminal domain IR04_RS09430 PF13673 Acetyltransferase (GNAT) domain IR04_RS09435 PF06857 IR04_RS09435 IR04_RS09440 PF03328 HpcH/HpaI aldolase/citrate lyase family IR04_RS09445 PF04223 Citrate lyase, alpha subunit (CitF) IR04_RS09450 PF03802 IR04_RS09450 IR04_RS09455 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase IR04_RS09460 PF10000 ACT domain IR04_RS09460 PF13840 ACT domain IR04_RS09465 PF00588 SpoU rRNA Methylase family IR04_RS09470 PF11953 Domain of unknown function (DUF3470) IR04_RS09470 PF13187 4Fe-4S dicluster domain IR04_RS09490 PF04434 IR04_RS09490 IR04_RS09500 PF08378 IR04_RS09500 IR04_RS09505 PF00271 Helicase conserved C-terminal domain IR04_RS09505 PF04851 Type III restriction enzyme, res subunit IR04_RS09505 PF13091 PLD-like domain IR04_RS09510 PF13489 Methyltransferase domain IR04_RS09515 PF01381 Helix-turn-helix IR04_RS09520 PF07804 HipA-like C-terminal domain IR04_RS09520 PF07805 HipA-like N-terminal domain IR04_RS09530 PF00665 Integrase core domain IR04_RS09530 PF13565 IR04_RS09530 IR04_RS09535 PF13737 IR04_RS09535 IR04_RS09540 PF13737 IR04_RS09540 IR04_RS09545 PF00171 Aldehyde dehydrogenase family IR04_RS09550 PF00041 Fibronectin type III domain IR04_RS09550 PF10462 Peptidase M66 IR04_RS09550 PF12561 IR04_RS09550 IR04_RS09555 PF00030 Beta/Gamma crystallin IR04_RS09565 PF08534 Redoxin IR04_RS09570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS09575 PF00486 Transcriptional regulatory protein, C terminal IR04_RS09585 PF05946 Toxin-coregulated pilus subunit TcpA IR04_RS09595 PF10671 Toxin co-regulated pilus biosynthesis protein Q IR04_RS09620 PF00437 Type II/IV secretion system protein IR04_RS09625 PF00482 Type II secretion system (T2SS), protein F IR04_RS09630 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F IR04_RS09635 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family IR04_RS09640 PF01478 Type IV leader peptidase family IR04_RS09640 PF06750 IR04_RS09640 IR04_RS09645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS09645 PF00672 HAMP domain IR04_RS09645 PF02743 Cache domain IR04_RS09655 PF06271 IR04_RS09655 IR04_RS09660 PF01551 Peptidase family M23 IR04_RS09665 PF13505 Outer membrane protein beta-barrel domain IR04_RS09670 PF13322 IR04_RS09670 IR04_RS09670 PF13402 Peptidase M60-like family IR04_RS09680 PF00589 Phage integrase family IR04_RS09680 PF13356 Domain of unknown function (DUF4102) IR04_RS09685 PF01668 SmpB protein IR04_RS09690 PF03364 Polyketide cyclase / dehydrase and lipid transport IR04_RS09695 PF03658 RnfH family Ubiquitin IR04_RS09700 PF04355 SmpA / OmlA family IR04_RS09705 PF02463 RecF/RecN/SMC N terminal domain IR04_RS09710 PF01513 ATP-NAD kinase IR04_RS09715 PF01025 GrpE IR04_RS09720 PF00012 Hsp70 protein IR04_RS09725 PF00226 DnaJ domain IR04_RS09725 PF00684 DnaJ central domain IR04_RS09725 PF01556 DnaJ C terminal domain IR04_RS09730 PF13544 IR04_RS09730 IR04_RS09730 PF16732 IR04_RS09730 IR04_RS09735 PF12019 Type II transport protein GspH IR04_RS09735 PF13633 Prokaryotic N-terminal methylation site IR04_RS09750 PF13633 Prokaryotic N-terminal methylation site IR04_RS09760 PF03806 IR04_RS09760 IR04_RS09765 PF14437 IR04_RS09765 IR04_RS09775 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS09775 PF01464 Transglycosylase SLT domain IR04_RS09790 PF01797 Transposase IS200 like IR04_RS09795 PF14056 IR04_RS09795 IR04_RS09800 PF06786 IR04_RS09800 IR04_RS09805 PF04391 IR04_RS09805 IR04_RS09815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IR04_RS09815 PF03129 Anticodon binding domain IR04_RS09815 PF04073 Aminoacyl-tRNA editing domain IR04_RS09820 PF01980 Uncharacterised protein family UPF0066 IR04_RS09825 PF01197 Ribosomal protein L31 IR04_RS09830 PF00444 Ribosomal protein L36 IR04_RS09835 PF03806 IR04_RS09835 IR04_RS09840 PF02639 IR04_RS09840 IR04_RS09850 PF13302 Acetyltransferase (GNAT) domain IR04_RS09855 PF11743 IR04_RS09855 IR04_RS09860 PF12069 IR04_RS09860 IR04_RS09865 PF04287 tRNA pseudouridine synthase C IR04_RS09870 PF00849 RNA pseudouridylate synthase IR04_RS09875 PF02779 Transketolase, pyrimidine binding domain IR04_RS09875 PF02780 Transketolase, C-terminal domain IR04_RS09875 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IR04_RS09880 PF00348 Polyprenyl synthetase IR04_RS09885 PF02609 Exonuclease VII small subunit IR04_RS09890 PF01618 IR04_RS09890 IR04_RS09895 PF00691 OmpA family IR04_RS09895 PF13677 IR04_RS09895 IR04_RS09900 PF02568 Thiamine biosynthesis protein (ThiI) IR04_RS09900 PF02926 THUMP domain IR04_RS09910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS09910 PF03466 LysR substrate binding domain IR04_RS09915 PF04241 IR04_RS09915 IR04_RS09925 PF03641 Possible lysine decarboxylase IR04_RS09925 PF11892 Domain of unknown function (DUF3412) IR04_RS09925 PF14793 Domain of unknown function (DUF4478) IR04_RS09930 PF00990 GGDEF domain IR04_RS09935 PF13424 Tetratricopeptide repeat IR04_RS09940 PF14489 QueF-like protein IR04_RS09940 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IR04_RS09945 PF07348 Syd protein (SUKH-2) IR04_RS09950 PF10071 IR04_RS09950 IR04_RS09955 PF03180 NLPA lipoprotein IR04_RS09960 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS09965 PF00005 ABC transporter IR04_RS09965 PF09383 NIL domain IR04_RS09970 PF13242 HAD-hyrolase-like IR04_RS09975 PF00356 Bacterial regulatory proteins, lacI family IR04_RS09975 PF13377 Periplasmic binding protein-like domain IR04_RS09980 PF00367 phosphotransferase system, EIIB IR04_RS09980 PF02378 Phosphotransferase system, EIIC IR04_RS09985 PF00128 Alpha amylase, catalytic domain IR04_RS10015 PF01451 Low molecular weight phosphotyrosine protein phosphatase IR04_RS10020 PF02350 UDP-N-acetylglucosamine 2-epimerase IR04_RS10025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IR04_RS10025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IR04_RS10025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IR04_RS10030 PF00132 Bacterial transferase hexapeptide (six repeats) IR04_RS10035 PF00534 Glycosyl transferases group 1 IR04_RS10035 PF13439 Glycosyltransferase Family 4 IR04_RS10040 PF13440 IR04_RS10040 IR04_RS10040 PF14667 Polysaccharide biosynthesis C-terminal domain IR04_RS10050 PF00132 Bacterial transferase hexapeptide (six repeats) IR04_RS10055 PF00501 AMP-binding enzyme IR04_RS10060 PF00534 Glycosyl transferases group 1 IR04_RS10070 PF03808 IR04_RS10070 IR04_RS10080 PF12708 Pectate lyase superfamily protein IR04_RS10085 PF16458 IR04_RS10085 IR04_RS10090 PF04932 IR04_RS10090 IR04_RS10100 PF02397 IR04_RS10100 IR04_RS10100 PF13727 CoA-binding domain IR04_RS10105 PF10082 IR04_RS10105 IR04_RS10110 PF02563 Polysaccharide biosynthesis/export protein IR04_RS10110 PF10531 SLBB domain IR04_RS10115 PF02706 Chain length determinant protein IR04_RS10115 PF13614 AAA domain IR04_RS10115 PF13807 IR04_RS10115 IR04_RS10125 PF04892 IR04_RS10125 IR04_RS10130 PF02588 IR04_RS10130 IR04_RS10135 PF00464 Serine hydroxymethyltransferase IR04_RS10145 PF04055 Radical SAM superfamily IR04_RS10145 PF16881 IR04_RS10145 IR04_RS10150 PF03099 Biotin/lipoate A/B protein ligase family IR04_RS10155 PF04359 Protein of unknown function (DUF493) IR04_RS10165 PF00768 D-alanyl-D-alanine carboxypeptidase IR04_RS10165 PF07943 Penicillin-binding protein 5, C-terminal domain IR04_RS10170 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel IR04_RS10170 PF05036 Sporulation related domain IR04_RS10175 PF01098 IR04_RS10175 IR04_RS10180 PF00905 Penicillin binding protein transpeptidase domain IR04_RS10180 PF03717 Penicillin-binding Protein dimerisation domain IR04_RS10185 PF02590 Predicted SPOUT methyltransferase IR04_RS10190 PF02410 Oligomerisation domain IR04_RS10195 PF06144 DNA polymerase III, delta subunit IR04_RS10195 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IR04_RS10200 PF04390 Lipopolysaccharide-assembly IR04_RS10205 PF00133 tRNA synthetases class I (I, L, M and V) IR04_RS10205 PF08264 Anticodon-binding domain of tRNA IR04_RS10205 PF13603 Leucyl-tRNA synthetase, Domain 2 IR04_RS10210 PF07295 IR04_RS10210 IR04_RS10215 PF00795 Carbon-nitrogen hydrolase IR04_RS10220 PF00571 CBS domain IR04_RS10220 PF03471 Transporter associated domain IR04_RS10225 PF02130 Uncharacterized protein family UPF0054 IR04_RS10230 PF02562 PhoH-like protein IR04_RS10235 PF00919 Uncharacterized protein family UPF0004 IR04_RS10235 PF01938 TRAM domain IR04_RS10235 PF04055 Radical SAM superfamily IR04_RS10240 PF01494 FAD binding domain IR04_RS10245 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IR04_RS10250 PF00391 PEP-utilising enzyme, mobile domain IR04_RS10250 PF02896 PEP-utilising enzyme, TIM barrel domain IR04_RS10250 PF05524 PEP-utilising enzyme, N-terminal IR04_RS10255 PF00381 PTS HPr component phosphorylation site IR04_RS10265 PF00291 Pyridoxal-phosphate dependent enzyme IR04_RS10270 PF07264 Etoposide-induced protein 2 IR04_RS10275 PF04354 ZipA, C-terminal FtsZ-binding domain IR04_RS10280 PF00533 BRCA1 C Terminus (BRCT) domain IR04_RS10280 PF01653 NAD-dependent DNA ligase adenylation domain IR04_RS10280 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IR04_RS10280 PF03120 NAD-dependent DNA ligase OB-fold domain IR04_RS10280 PF12826 Helix-hairpin-helix motif IR04_RS10280 PF14520 Helix-hairpin-helix domain IR04_RS10285 PF13609 Gram-negative porin IR04_RS10295 PF13411 MerR HTH family regulatory protein IR04_RS10300 PF01957 NfeD-like C-terminal, partner-binding IR04_RS10305 PF01145 SPFH domain / Band 7 family IR04_RS10305 PF16200 IR04_RS10305 IR04_RS10310 PF00085 Thioredoxin IR04_RS10310 PF14559 Tetratricopeptide repeat IR04_RS10310 PF14561 Tetratricopeptide repeat IR04_RS10315 PF00106 short chain dehydrogenase IR04_RS10320 PF01370 NAD dependent epimerase/dehydratase family IR04_RS10320 PF08338 Domain of unknown function (DUF1731) IR04_RS10325 PF12850 Calcineurin-like phosphoesterase superfamily domain IR04_RS10330 PF10262 Rdx family IR04_RS10340 PF00486 Transcriptional regulatory protein, C terminal IR04_RS10345 PF00183 Hsp90 protein IR04_RS10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS10350 PF00406 Adenylate kinase IR04_RS10350 PF05191 Adenylate kinase, active site lid IR04_RS10355 PF00762 Ferrochelatase IR04_RS10360 PF00854 POT family IR04_RS10365 PF02357 Transcription termination factor nusG IR04_RS10370 PF00733 Asparagine synthase IR04_RS10370 PF13537 Glutamine amidotransferase domain IR04_RS10375 PF00999 Sodium/hydrogen exchanger family IR04_RS10375 PF02254 TrkA-N domain IR04_RS10380 PF00480 ROK family IR04_RS10385 PF01979 Amidohydrolase family IR04_RS10390 PF00367 phosphotransferase system, EIIB IR04_RS10390 PF02378 Phosphotransferase system, EIIC IR04_RS10395 PF00749 tRNA synthetases class I (E and Q), catalytic domain IR04_RS10395 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IR04_RS10405 PF01416 tRNA pseudouridine synthase IR04_RS10410 PF01039 Carboxyl transferase domain IR04_RS10415 PF02875 Mur ligase family, glutamate ligase domain IR04_RS10415 PF08245 Mur ligase middle domain IR04_RS10420 PF05036 Sporulation related domain IR04_RS10425 PF02674 IR04_RS10425 IR04_RS10430 PF13522 Glutamine amidotransferase domain IR04_RS10435 PF03553 IR04_RS10435 IR04_RS10435 PF13726 IR04_RS10435 IR04_RS10440 PF00929 Exonuclease IR04_RS10450 PF00691 OmpA family IR04_RS10455 PF10952 IR04_RS10455 IR04_RS10460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IR04_RS10465 PF00633 Helix-hairpin-helix motif IR04_RS10465 PF00730 HhH-GPD superfamily base excision DNA repair protein IR04_RS10465 PF10576 Iron-sulfur binding domain of endonuclease III IR04_RS10470 PF02508 IR04_RS10470 IR04_RS10475 PF04205 FMN-binding domain IR04_RS10480 PF03116 IR04_RS10480 IR04_RS10490 PF04060 Putative Fe-S cluster IR04_RS10490 PF14697 4Fe-4S dicluster domain IR04_RS10495 PF02508 IR04_RS10495 IR04_RS10505 PF00271 Helicase conserved C-terminal domain IR04_RS10505 PF02151 UvrB/uvrC motif IR04_RS10505 PF04851 Type III restriction enzyme, res subunit IR04_RS10505 PF12344 Ultra-violet resistance protein B IR04_RS10515 PF00072 Response regulator receiver domain IR04_RS10515 PF00158 Sigma-54 interaction domain IR04_RS10515 PF02954 Bacterial regulatory protein, Fis family IR04_RS10520 PF01627 Hpt domain IR04_RS10525 PF01933 Uncharacterised protein family UPF0052 IR04_RS10530 PF04055 Radical SAM superfamily IR04_RS10530 PF06463 Molybdenum Cofactor Synthesis C IR04_RS10530 PF13353 4Fe-4S single cluster domain IR04_RS10535 PF00994 Probable molybdopterin binding domain IR04_RS10540 PF01967 MoaC family IR04_RS10545 PF02597 ThiS family IR04_RS10550 PF02391 MoaE protein IR04_RS10555 PF00990 GGDEF domain IR04_RS10560 PF00571 CBS domain IR04_RS10570 PF00122 E1-E2 ATPase IR04_RS10570 PF00403 Heavy-metal-associated domain IR04_RS10570 PF00702 haloacid dehalogenase-like hydrolase IR04_RS10575 PF01048 Phosphorylase superfamily IR04_RS10585 PF01588 Putative tRNA binding domain IR04_RS10585 PF09334 tRNA synthetases class I (M) IR04_RS10590 PF10609 ParA/MinD ATPase like IR04_RS10600 PF00485 Phosphoribulokinase / Uridine kinase family IR04_RS10605 PF05170 IR04_RS10605 IR04_RS10610 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IR04_RS10610 PF12557 Cob(I)alamin adenosyltransferase N terminal IR04_RS10615 PF01451 Low molecular weight phosphotyrosine protein phosphatase IR04_RS10620 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IR04_RS10625 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IR04_RS10630 PF11859 IR04_RS10630 IR04_RS10635 PF04542 Sigma-70 region 2 IR04_RS10635 PF08281 Sigma-70, region 4 IR04_RS10645 PF00108 Thiolase, N-terminal domain IR04_RS10645 PF02803 Thiolase, C-terminal domain IR04_RS10650 PF00378 Enoyl-CoA hydratase/isomerase family IR04_RS10650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IR04_RS10650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IR04_RS10655 PF00881 Nitroreductase family IR04_RS10660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS10660 PF03466 LysR substrate binding domain IR04_RS10665 PF00072 Response regulator receiver domain IR04_RS10675 PF04304 IR04_RS10675 IR04_RS10680 PF00156 Phosphoribosyl transferase domain IR04_RS10685 PF12168 IR04_RS10685 IR04_RS10685 PF12169 DNA polymerase III subunits gamma and tau domain III IR04_RS10685 PF12170 DNA polymerase III tau subunit V interacting with alpha IR04_RS10685 PF13177 DNA polymerase III, delta subunit IR04_RS10690 PF02575 YbaB/EbfC DNA-binding family IR04_RS10695 PF02132 RecR protein IR04_RS10695 PF13662 Toprim domain IR04_RS10700 PF03692 IR04_RS10700 IR04_RS10705 PF03692 IR04_RS10705 IR04_RS10710 PF00106 short chain dehydrogenase IR04_RS10715 PF01343 Peptidase family S49 IR04_RS10715 PF08496 IR04_RS10715 IR04_RS10720 PF00291 Pyridoxal-phosphate dependent enzyme IR04_RS10725 PF01037 AsnC family IR04_RS10725 PF13412 Winged helix-turn-helix DNA-binding IR04_RS10735 PF09619 Type III secretion system lipoprotein chaperone (YscW) IR04_RS10740 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IR04_RS10750 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS10750 PF00990 GGDEF domain IR04_RS10755 PF01022 Bacterial regulatory protein, arsR family IR04_RS10760 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IR04_RS10760 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IR04_RS10765 PF00782 Dual specificity phosphatase, catalytic domain IR04_RS10770 PF07690 Major Facilitator Superfamily IR04_RS10775 PF00704 Glycosyl hydrolases family 18 IR04_RS10775 PF06483 IR04_RS10775 IR04_RS10775 PF14600 Cellulose-binding domain IR04_RS10780 PF02517 CAAX protease self-immunity IR04_RS10785 PF01161 Phosphatidylethanolamine-binding protein IR04_RS10790 PF12833 Helix-turn-helix domain IR04_RS10805 PF01300 Telomere recombination IR04_RS10805 PF03481 Putative GTP-binding controlling metal-binding IR04_RS10810 PF01627 Hpt domain IR04_RS10815 PF00072 Response regulator receiver domain IR04_RS10815 PF08668 HDOD domain IR04_RS10820 PF00072 Response regulator receiver domain IR04_RS10825 PF04509 CheC-like family IR04_RS10830 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS10830 PF08448 PAS fold IR04_RS10835 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS10840 PF00072 Response regulator receiver domain IR04_RS10840 PF00563 EAL domain IR04_RS10845 PF00072 Response regulator receiver domain IR04_RS10845 PF13487 HD domain IR04_RS10850 PF00672 HAMP domain IR04_RS10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS10855 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein IR04_RS10860 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR04_RS10865 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS10870 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS10870 PF12911 IR04_RS10870 IR04_RS10875 PF00005 ABC transporter IR04_RS10875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR04_RS10880 PF00005 ABC transporter IR04_RS10880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR04_RS10885 PF13409 Glutathione S-transferase, N-terminal domain IR04_RS10885 PF13410 Glutathione S-transferase, C-terminal domain IR04_RS10890 PF01515 Phosphate acetyl/butaryl transferase IR04_RS10890 PF07085 DRTGG domain IR04_RS10890 PF13500 AAA domain IR04_RS10895 PF00871 Acetokinase family IR04_RS10900 PF04217 IR04_RS10900 IR04_RS10905 PF09905 Uncharacterized conserved protein (DUF2132) IR04_RS10910 PF04392 ABC transporter substrate binding protein IR04_RS10915 PF02653 IR04_RS10915 IR04_RS10920 PF00005 ABC transporter IR04_RS10925 PF00990 GGDEF domain IR04_RS10930 PF01207 Dihydrouridine synthase (Dus) IR04_RS10935 PF02810 SEC-C motif IR04_RS10935 PF03695 Uncharacterised protein family (UPF0149) IR04_RS10940 PF03548 Outer membrane lipoprotein carrier protein LolA IR04_RS10945 PF00004 ATPase family associated with various cellular activities (AAA) IR04_RS10945 PF12002 MgsA AAA+ ATPase C terminal IR04_RS10945 PF16193 IR04_RS10945 IR04_RS10950 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IR04_RS10950 PF02403 Seryl-tRNA synthetase N-terminal domain IR04_RS10955 PF00202 Aminotransferase class-III IR04_RS10960 PF04055 Radical SAM superfamily IR04_RS10960 PF06968 Biotin and Thiamin Synthesis associated domain IR04_RS10965 PF00155 Aminotransferase class I and II IR04_RS10970 PF08241 Methyltransferase domain IR04_RS10975 PF13500 AAA domain IR04_RS10985 PF01435 Peptidase family M48 IR04_RS10990 PF12680 SnoaL-like domain IR04_RS10995 PF00106 short chain dehydrogenase IR04_RS11000 PF01593 Flavin containing amine oxidoreductase IR04_RS11005 PF07103 IR04_RS11005 IR04_RS11010 PF02353 Mycolic acid cyclopropane synthetase IR04_RS11015 PF11086 IR04_RS11015 IR04_RS11020 PF16036 IR04_RS11020 IR04_RS11025 PF12915 IR04_RS11025 IR04_RS11030 PF00206 Lyase IR04_RS11030 PF08328 Adenylosuccinate lyase C-terminal IR04_RS11035 PF04356 Protein of unknown function (DUF489) IR04_RS11040 PF03054 tRNA methyl transferase IR04_RS11045 PF00294 pfkB family carbohydrate kinase IR04_RS11050 PF00816 H-NS histone family IR04_RS11055 PF03553 IR04_RS11055 IR04_RS11060 PF01634 ATP phosphoribosyltransferase IR04_RS11060 PF08029 HisG, C-terminal domain IR04_RS11065 PF00815 Histidinol dehydrogenase IR04_RS11070 PF00155 Aminotransferase class I and II IR04_RS11075 PF00475 Imidazoleglycerol-phosphate dehydratase IR04_RS11075 PF08645 Polynucleotide kinase 3 phosphatase IR04_RS11080 PF00117 Glutamine amidotransferase class-I IR04_RS11085 PF00977 Histidine biosynthesis protein IR04_RS11090 PF00977 Histidine biosynthesis protein IR04_RS11095 PF01502 Phosphoribosyl-AMP cyclohydrolase IR04_RS11095 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IR04_RS11100 PF00849 RNA pseudouridylate synthase IR04_RS11105 PF03971 Monomeric isocitrate dehydrogenase IR04_RS11110 PF00313 'Cold-shock' DNA-binding domain IR04_RS11115 PF02617 ATP-dependent Clp protease adaptor protein ClpS IR04_RS11120 PF00004 ATPase family associated with various cellular activities (AAA) IR04_RS11120 PF02861 Clp amino terminal domain IR04_RS11120 PF07724 AAA domain (Cdc48 subfamily) IR04_RS11120 PF10431 C-terminal, D2-small domain, of ClpB protein IR04_RS11125 PF02080 TrkA-C domain IR04_RS11125 PF06826 IR04_RS11125 IR04_RS11130 PF00462 Glutaredoxin IR04_RS11135 PF00465 Iron-containing alcohol dehydrogenase IR04_RS11140 PF01380 SIS domain IR04_RS11140 PF01418 Helix-turn-helix domain, rpiR family IR04_RS11145 PF00282 Pyridoxal-dependent decarboxylase conserved domain IR04_RS11155 PF03956 IR04_RS11155 IR04_RS11160 PF08668 HDOD domain IR04_RS11165 PF04993 TfoX N-terminal domain IR04_RS11165 PF04994 TfoX C-terminal domain IR04_RS11175 PF00072 Response regulator receiver domain IR04_RS11180 PF00027 Cyclic nucleotide-binding domain IR04_RS11180 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS11180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS11185 PF06097 IR04_RS11185 IR04_RS11190 PF00266 Aminotransferase class-V IR04_RS11195 PF14397 IR04_RS11195 IR04_RS11200 PF14400 IR04_RS11200 IR04_RS11200 PF14402 IR04_RS11200 IR04_RS11205 PF05618 Putative ATP-dependant zinc protease IR04_RS11210 PF08003 Protein of unknown function (DUF1698) IR04_RS11215 PF13649 Methyltransferase domain IR04_RS11220 PF01904 Protein of unknown function DUF72 IR04_RS11225 PF00152 tRNA synthetases class II (D, K and N) IR04_RS11225 PF01336 OB-fold nucleic acid binding domain IR04_RS11225 PF02938 GAD domain IR04_RS11230 PF00265 Thymidine kinase IR04_RS11235 PF00375 Sodium:dicarboxylate symporter family IR04_RS11240 PF00290 Tryptophan synthase alpha chain IR04_RS11245 PF00291 Pyridoxal-phosphate dependent enzyme IR04_RS11250 PF00218 Indole-3-glycerol phosphate synthase IR04_RS11250 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IR04_RS11255 PF00591 Glycosyl transferase family, a/b domain IR04_RS11255 PF02885 Glycosyl transferase family, helical bundle domain IR04_RS11260 PF00117 Glutamine amidotransferase class-I IR04_RS11265 PF00425 chorismate binding enzyme IR04_RS11265 PF04715 Anthranilate synthase component I, N terminal region IR04_RS11270 PF08056 IR04_RS11270 IR04_RS11275 PF02811 PHP domain IR04_RS11280 PF01300 Telomere recombination IR04_RS11285 PF00849 RNA pseudouridylate synthase IR04_RS11285 PF01479 S4 domain IR04_RS11290 PF00005 ABC transporter IR04_RS11290 PF00664 ABC transporter transmembrane region IR04_RS11295 PF00005 ABC transporter IR04_RS11295 PF00664 ABC transporter transmembrane region IR04_RS11300 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR04_RS11305 PF10014 2OG-Fe dioxygenase IR04_RS11310 PF00266 Aminotransferase class-V IR04_RS11315 PF00990 GGDEF domain IR04_RS11320 PF02698 DUF218 domain IR04_RS11325 PF11872 IR04_RS11325 IR04_RS11330 PF00390 Malic enzyme, N-terminal domain IR04_RS11330 PF03949 Malic enzyme, NAD binding domain IR04_RS11340 PF01259 SAICAR synthetase IR04_RS11355 PF08238 Sel1 repeat IR04_RS11360 PF00691 OmpA family IR04_RS11360 PF13488 IR04_RS11360 IR04_RS11365 PF10979 IR04_RS11365 IR04_RS11370 PF11813 IR04_RS11370 IR04_RS11375 PF01565 FAD binding domain IR04_RS11375 PF02913 FAD linked oxidases, C-terminal domain IR04_RS11375 PF13183 4Fe-4S dicluster domain IR04_RS11380 PF04191 Phospholipid methyltransferase IR04_RS11385 PF00089 Trypsin IR04_RS11390 PF12119 IR04_RS11390 IR04_RS11395 PF00221 Aromatic amino acid lyase IR04_RS11400 PF01175 Urocanase IR04_RS11405 PF00491 Arginase family IR04_RS11410 PF01979 Amidohydrolase family IR04_RS11415 PF00392 Bacterial regulatory proteins, gntR family IR04_RS11415 PF07702 UTRA domain IR04_RS11420 PF11383 IR04_RS11420 IR04_RS11425 PF04269 Protein of unknown function, DUF440 IR04_RS11430 PF01132 Elongation factor P (EF-P) OB domain IR04_RS11430 PF08207 Elongation factor P (EF-P) KOW-like domain IR04_RS11430 PF09285 Elongation factor P, C-terminal IR04_RS11440 PF00563 EAL domain IR04_RS11440 PF02378 Phosphotransferase system, EIIC IR04_RS11445 PF00136 DNA polymerase family B IR04_RS11445 PF03104 DNA polymerase family B, exonuclease domain IR04_RS11450 PF00072 Response regulator receiver domain IR04_RS11450 PF00196 Bacterial regulatory proteins, luxR family IR04_RS11455 PF01541 GIY-YIG catalytic domain IR04_RS11455 PF02151 UvrB/uvrC motif IR04_RS11455 PF08459 UvrC Helix-hairpin-helix N-terminal IR04_RS11455 PF14520 Helix-hairpin-helix domain IR04_RS11460 PF01066 CDP-alcohol phosphatidyltransferase IR04_RS11485 PF00990 GGDEF domain IR04_RS11485 PF01814 Hemerythrin HHE cation binding domain IR04_RS11490 PF00583 Acetyltransferase (GNAT) family IR04_RS11495 PF01409 tRNA synthetases class II core domain (F) IR04_RS11495 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IR04_RS11500 PF01588 Putative tRNA binding domain IR04_RS11500 PF03147 Ferredoxin-fold anticodon binding domain IR04_RS11500 PF03483 B3/4 domain IR04_RS11500 PF03484 tRNA synthetase B5 domain IR04_RS11505 PF00216 Bacterial DNA-binding protein IR04_RS11515 PF04607 Region found in RelA / SpoT proteins IR04_RS11520 PF05724 Thiopurine S-methyltransferase (TPMT) IR04_RS11530 PF02222 ATP-grasp domain IR04_RS11535 PF03547 IR04_RS11535 IR04_RS11540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IR04_RS11540 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IR04_RS11545 PF04172 IR04_RS11545 IR04_RS11550 PF03788 IR04_RS11550 IR04_RS11555 PF00929 Exonuclease IR04_RS11555 PF08411 Exonuclease C-terminal IR04_RS11560 PF00375 Sodium:dicarboxylate symporter family IR04_RS11565 PF01641 SelR domain IR04_RS11570 PF02277 Phosphoribosyltransferase IR04_RS11575 PF02654 IR04_RS11575 IR04_RS11580 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IR04_RS11585 PF00300 Histidine phosphatase superfamily (branch 1) IR04_RS11590 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IR04_RS11595 PF01032 FecCD transport family IR04_RS11600 PF00005 ABC transporter IR04_RS11605 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IR04_RS11610 PF11042 IR04_RS11610 IR04_RS11615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS11615 PF00672 HAMP domain IR04_RS11615 PF17200 IR04_RS11615 IR04_RS11620 PF13740 ACT domain IR04_RS11625 PF13084 IR04_RS11625 IR04_RS11630 PF00994 Probable molybdopterin binding domain IR04_RS11640 PF00111 2Fe-2S iron-sulfur cluster binding domain IR04_RS11645 PF00268 Ribonucleotide reductase, small chain IR04_RS11650 PF00317 Ribonucleotide reductase, all-alpha domain IR04_RS11650 PF02867 Ribonucleotide reductase, barrel domain IR04_RS11650 PF03477 ATP cone domain IR04_RS11655 PF13489 Methyltransferase domain IR04_RS11660 PF00521 DNA gyrase/topoisomerase IV, subunit A IR04_RS11660 PF03989 DNA gyrase C-terminal domain, beta-propeller IR04_RS11665 PF00581 Rhodanese-like domain IR04_RS11670 PF12833 Helix-turn-helix domain IR04_RS11675 PF07690 Major Facilitator Superfamily IR04_RS11685 PF00925 GTP cyclohydrolase II IR04_RS11690 PF09375 Imelysin IR04_RS11695 PF06537 IR04_RS11695 IR04_RS11700 PF09375 Imelysin IR04_RS11705 PF07433 IR04_RS11705 IR04_RS11710 PF01471 Putative peptidoglycan binding domain IR04_RS11710 PF03734 L,D-transpeptidase catalytic domain IR04_RS11715 PF05951 IR04_RS11715 IR04_RS11720 PF00753 Metallo-beta-lactamase superfamily IR04_RS11725 PF11201 IR04_RS11725 IR04_RS11735 PF03480 Bacterial extracellular solute-binding protein, family 7 IR04_RS11740 PF04290 IR04_RS11740 IR04_RS11745 PF06808 IR04_RS11745 IR04_RS11750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS11750 PF07730 Histidine kinase IR04_RS11750 PF17200 IR04_RS11750 IR04_RS11755 PF00072 Response regulator receiver domain IR04_RS11755 PF00196 Bacterial regulatory proteins, luxR family IR04_RS11760 PF01047 MarR family IR04_RS11765 PF02028 BCCT family transporter IR04_RS11770 PF01522 Polysaccharide deacetylase IR04_RS11770 PF02839 Carbohydrate binding domain IR04_RS11775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IR04_RS11780 PF02378 Phosphotransferase system, EIIC IR04_RS11785 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit IR04_RS11790 PF02056 Family 4 glycosyl hydrolase IR04_RS11790 PF11975 Family 4 glycosyl hydrolase C-terminal domain IR04_RS11795 PF04794 YdjC-like protein IR04_RS11800 PF00356 Bacterial regulatory proteins, lacI family IR04_RS11800 PF13377 Periplasmic binding protein-like domain IR04_RS11805 PF13632 Glycosyl transferase family group 2 IR04_RS11810 PF04349 Periplasmic glucan biosynthesis protein, MdoG IR04_RS11815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS11815 PF00672 HAMP domain IR04_RS11815 PF02743 Cache domain IR04_RS11820 PF00929 Exonuclease IR04_RS11825 PF00027 Cyclic nucleotide-binding domain IR04_RS11825 PF00571 CBS domain IR04_RS11825 PF03445 IR04_RS11825 IR04_RS11825 PF10335 IR04_RS11825 IR04_RS11830 PF00155 Aminotransferase class I and II IR04_RS11840 PF01966 HD domain IR04_RS11845 PF08543 Phosphomethylpyrimidine kinase IR04_RS11850 PF00152 tRNA synthetases class II (D, K and N) IR04_RS11850 PF01336 OB-fold nucleic acid binding domain IR04_RS11855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS11855 PF00672 HAMP domain IR04_RS11860 PF01242 6-pyruvoyl tetrahydropterin synthase IR04_RS11865 PF03313 IR04_RS11865 IR04_RS11865 PF03315 Serine dehydratase beta chain IR04_RS11870 PF01490 IR04_RS11870 IR04_RS11875 PF00293 NUDIX domain IR04_RS11880 PF00425 chorismate binding enzyme IR04_RS11880 PF04715 Anthranilate synthase component I, N terminal region IR04_RS11885 PF05681 IR04_RS11885 IR04_RS11885 PF05683 Fumarase C-terminus IR04_RS11895 PF04317 IR04_RS11895 IR04_RS11900 PF05128 IR04_RS11900 IR04_RS11905 PF00158 Sigma-54 interaction domain IR04_RS11905 PF00989 PAS fold IR04_RS11910 PF13302 Acetyltransferase (GNAT) domain IR04_RS11915 PF11163 IR04_RS11915 IR04_RS11920 PF00892 EamA-like transporter family IR04_RS11925 PF00842 Alanine racemase, C-terminal domain IR04_RS11925 PF01168 Alanine racemase, N-terminal domain IR04_RS11930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS11930 PF00672 HAMP domain IR04_RS11930 PF12729 IR04_RS11930 IR04_RS11935 PF00939 Sodium:sulfate symporter transmembrane region IR04_RS11940 PF00027 Cyclic nucleotide-binding domain IR04_RS11940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS11945 PF00072 Response regulator receiver domain IR04_RS11950 PF04393 IR04_RS11950 IR04_RS11955 PF06629 IR04_RS11955 IR04_RS11960 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS11960 PF00672 HAMP domain IR04_RS11960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS11965 PF00072 Response regulator receiver domain IR04_RS11965 PF00486 Transcriptional regulatory protein, C terminal IR04_RS11970 PF00912 Transglycosylase IR04_RS11975 PF04400 IR04_RS11975 IR04_RS11980 PF02579 Dinitrogenase iron-molybdenum cofactor IR04_RS11990 PF13407 Periplasmic binding protein domain IR04_RS12000 PF00005 ABC transporter IR04_RS12005 PF02653 IR04_RS12005 IR04_RS12010 PF13505 Outer membrane protein beta-barrel domain IR04_RS12015 PF07313 Protein of unknown function (DUF1460) IR04_RS12020 PF01970 IR04_RS12020 IR04_RS12025 PF07331 IR04_RS12025 IR04_RS12030 PF03401 Tripartite tricarboxylate transporter family receptor IR04_RS12035 PF00392 Bacterial regulatory proteins, gntR family IR04_RS12035 PF07729 FCD domain IR04_RS12040 PF13714 Phosphoenolpyruvate phosphomutase IR04_RS12045 PF00285 Citrate synthase IR04_RS12050 PF00330 Aconitase family (aconitate hydratase) IR04_RS12050 PF00694 Aconitase C-terminal domain IR04_RS12055 PF04303 PrpF protein IR04_RS12060 PF00501 AMP-binding enzyme IR04_RS12060 PF13193 AMP-binding enzyme C-terminal domain IR04_RS12060 PF16177 IR04_RS12060 IR04_RS12065 PF00583 Acetyltransferase (GNAT) family IR04_RS12070 PF00293 NUDIX domain IR04_RS12075 PF01546 Peptidase family M20/M25/M40 IR04_RS12075 PF07687 Peptidase dimerisation domain IR04_RS12080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IR04_RS12080 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal IR04_RS12085 PF04209 homogentisate 1,2-dioxygenase IR04_RS12090 PF01557 Fumarylacetoacetate (FAA) hydrolase family IR04_RS12095 PF02798 Glutathione S-transferase, N-terminal domain IR04_RS12095 PF14497 Glutathione S-transferase, C-terminal domain IR04_RS12100 PF00072 Response regulator receiver domain IR04_RS12100 PF13487 HD domain IR04_RS12105 PF00072 Response regulator receiver domain IR04_RS12105 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS12105 PF01627 Hpt domain IR04_RS12105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS12105 PF08448 PAS fold IR04_RS12110 PF08534 Redoxin IR04_RS12120 PF00990 GGDEF domain IR04_RS12120 PF07494 Two component regulator propeller IR04_RS12120 PF07495 Y_Y_Y domain IR04_RS12125 PF10672 S-adenosylmethionine-dependent methyltransferase IR04_RS12130 PF00708 Acylphosphatase IR04_RS12135 PF04358 DsrC like protein IR04_RS12140 PF01027 Inhibitor of apoptosis-promoting Bax1 IR04_RS12150 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS12155 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS12160 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS12165 PF10414 Sirohaem synthase dimerisation region IR04_RS12165 PF13241 Putative NAD(P)-binding IR04_RS12170 PF08282 haloacid dehalogenase-like hydrolase IR04_RS12175 PF04055 Radical SAM superfamily IR04_RS12175 PF13394 4Fe-4S single cluster domain IR04_RS12180 PF06508 Queuosine biosynthesis protein QueC IR04_RS12185 PF00990 GGDEF domain IR04_RS12185 PF13424 Tetratricopeptide repeat IR04_RS12185 PF13432 Tetratricopeptide repeat IR04_RS12195 PF09084 NMT1/THI5 like IR04_RS12200 PF00990 GGDEF domain IR04_RS12210 PF00990 GGDEF domain IR04_RS12215 PF00012 Hsp70 protein IR04_RS12215 PF12531 IR04_RS12215 IR04_RS12220 PF00012 Hsp70 protein IR04_RS12225 PF10816 IR04_RS12225 IR04_RS12230 PF00990 GGDEF domain IR04_RS12230 PF03924 CHASE domain IR04_RS12235 PF00929 Exonuclease IR04_RS12245 PF05099 Tellurite resistance protein TerB IR04_RS12260 PF00270 DEAD/DEAH box helicase IR04_RS12260 PF00271 Helicase conserved C-terminal domain IR04_RS12260 PF04408 Helicase associated domain (HA2) IR04_RS12260 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IR04_RS12260 PF11898 IR04_RS12260 IR04_RS12265 PF13505 Outer membrane protein beta-barrel domain IR04_RS12270 PF00012 Hsp70 protein IR04_RS12280 PF10013 IR04_RS12280 IR04_RS12285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS12285 PF03466 LysR substrate binding domain IR04_RS12290 PF07690 Major Facilitator Superfamily IR04_RS12295 PF00875 DNA photolyase IR04_RS12295 PF03441 FAD binding domain of DNA photolyase IR04_RS12300 PF00893 Small Multidrug Resistance protein IR04_RS12305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS12310 PF00072 Response regulator receiver domain IR04_RS12320 PF01584 CheW-like domain IR04_RS12320 PF01627 Hpt domain IR04_RS12320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS12320 PF02895 Signal transducing histidine kinase, homodimeric domain IR04_RS12325 PF00072 Response regulator receiver domain IR04_RS12330 PF01739 CheR methyltransferase, SAM binding domain IR04_RS12330 PF03705 CheR methyltransferase, all-alpha domain IR04_RS12340 PF00072 Response regulator receiver domain IR04_RS12340 PF01339 CheB methylesterase IR04_RS12345 PF01584 CheW-like domain IR04_RS12355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS12355 PF00672 HAMP domain IR04_RS12360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS12360 PF08447 PAS fold IR04_RS12360 PF13426 PAS domain IR04_RS12365 PF00270 DEAD/DEAH box helicase IR04_RS12365 PF00271 Helicase conserved C-terminal domain IR04_RS12370 PF00440 Bacterial regulatory proteins, tetR family IR04_RS12370 PF14246 AefR-like transcriptional repressor, C-terminal region IR04_RS12375 PF02321 Outer membrane efflux protein IR04_RS12380 PF13437 HlyD family secretion protein IR04_RS12380 PF13533 Biotin-lipoyl like IR04_RS12385 PF07690 Major Facilitator Superfamily IR04_RS12390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS12390 PF00672 HAMP domain IR04_RS12395 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IR04_RS12400 PF05638 Protein of unknown function (DUF796) IR04_RS12405 PF05954 Phage late control gene D protein (GPD) IR04_RS12405 PF16671 IR04_RS12405 IR04_RS12410 PF13503 IR04_RS12410 IR04_RS12415 PF01764 Lipase (class 3) IR04_RS12425 PF11153 IR04_RS12425 IR04_RS12430 PF01810 IR04_RS12430 IR04_RS12435 PF01235 IR04_RS12435 IR04_RS12450 PF13416 Bacterial extracellular solute-binding protein IR04_RS12455 PF13416 Bacterial extracellular solute-binding protein IR04_RS12460 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS12465 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS12470 PF00005 ABC transporter IR04_RS12470 PF08402 TOBE domain IR04_RS12480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IR04_RS12485 PF11205 IR04_RS12485 IR04_RS12490 PF01171 PP-loop family IR04_RS12495 PF00582 Universal stress protein family IR04_RS12500 PF00027 Cyclic nucleotide-binding domain IR04_RS12500 PF13545 Crp-like helix-turn-helix domain IR04_RS12505 PF13386 IR04_RS12505 IR04_RS12510 PF03597 IR04_RS12510 IR04_RS12515 PF00122 E1-E2 ATPase IR04_RS12515 PF00403 Heavy-metal-associated domain IR04_RS12515 PF00702 haloacid dehalogenase-like hydrolase IR04_RS12515 PF12156 IR04_RS12515 IR04_RS12520 PF05751 IR04_RS12520 IR04_RS12525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IR04_RS12525 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IR04_RS12530 PF05545 IR04_RS12530 IR04_RS12535 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO IR04_RS12540 PF00115 Cytochrome C and Quinol oxidase polypeptide I IR04_RS12550 PF08495 IR04_RS12550 IR04_RS12550 PF10442 IR04_RS12550 IR04_RS12555 PF00072 Response regulator receiver domain IR04_RS12555 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS12555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS12560 PF00005 ABC transporter IR04_RS12560 PF00664 ABC transporter transmembrane region IR04_RS12560 PF03412 Peptidase C39 family IR04_RS12565 PF13437 HlyD family secretion protein IR04_RS12570 PF00005 ABC transporter IR04_RS12570 PF00664 ABC transporter transmembrane region IR04_RS12580 PF02794 IR04_RS12580 IR04_RS12585 PF07634 IR04_RS12585 IR04_RS12585 PF11647 C-terminal region of Pasteurella multocida toxin residues 569-1285 IR04_RS12585 PF11713 Peptidase C80 family IR04_RS12585 PF12146 Putative lysophospholipase IR04_RS12585 PF16671 IR04_RS12585 IR04_RS12595 PF07459 IR04_RS12595 IR04_RS12600 PF02486 IR04_RS12600 IR04_RS12605 PF01381 Helix-turn-helix IR04_RS12610 PF01376 Heat-labile enterotoxin beta chain IR04_RS12615 PF01375 Heat-labile enterotoxin alpha chain IR04_RS12620 PF05707 Zonular occludens toxin (Zot) IR04_RS12625 PF10734 IR04_RS12625 IR04_RS12630 PF16710 IR04_RS12630 IR04_RS12640 PF07459 IR04_RS12640 IR04_RS12645 PF02486 IR04_RS12645 IR04_RS12650 PF01381 Helix-turn-helix IR04_RS12655 PF12375 IR04_RS12655 IR04_RS12675 PF05144 IR04_RS12675 IR04_RS12675 PF05155 IR04_RS12675 IR04_RS12680 PF01381 Helix-turn-helix IR04_RS12705 PF05144 IR04_RS12705 IR04_RS12705 PF05155 IR04_RS12705 IR04_RS12710 PF01381 Helix-turn-helix IR04_RS12715 PF01527 Transposase IR04_RS12720 PF00665 Integrase core domain IR04_RS12720 PF13276 IR04_RS12720 IR04_RS12730 PF12321 IR04_RS12730 IR04_RS12735 PF06303 Organiser of macrodomain of Terminus of chromosome IR04_RS12740 PF05362 Lon protease (S16) C-terminal proteolytic domain IR04_RS12740 PF13654 AAA domain IR04_RS12745 PF07977 FabA-like domain IR04_RS12750 PF04957 Ribosome modulation factor IR04_RS12755 PF11949 IR04_RS12755 IR04_RS12760 PF00005 ABC transporter IR04_RS12760 PF12848 ABC transporter IR04_RS12760 PF16326 IR04_RS12760 IR04_RS12765 PF05768 Glutaredoxin-like domain (DUF836) IR04_RS12770 PF01170 Putative RNA methylase family UPF0020 IR04_RS12770 PF02926 THUMP domain IR04_RS12770 PF10672 S-adenosylmethionine-dependent methyltransferase IR04_RS12775 PF07126 IR04_RS12775 IR04_RS12780 PF01180 Dihydroorotate dehydrogenase IR04_RS12785 PF05088 IR04_RS12785 IR04_RS12790 PF11197 IR04_RS12790 IR04_RS12795 PF01433 Peptidase family M1 IR04_RS12795 PF11940 Domain of unknown function (DUF3458) IR04_RS12805 PF00595 PDZ domain (Also known as DHR or GLGF) IR04_RS12805 PF03572 Peptidase family S41 IR04_RS12805 PF08180 IR04_RS12805 IR04_RS12805 PF11818 IR04_RS12805 IR04_RS12810 PF04352 ProQ/FINO family IR04_RS12815 PF13185 GAF domain IR04_RS12820 PF00005 ABC transporter IR04_RS12820 PF00664 ABC transporter transmembrane region IR04_RS12825 PF04403 IR04_RS12825 IR04_RS12830 PF02470 IR04_RS12830 IR04_RS12835 PF01189 NOL1/NOP2/sun family IR04_RS12835 PF13636 pre-rRNA processing and ribosome biogenesis IR04_RS12835 PF17125 IR04_RS12835 IR04_RS12840 PF13509 S1 domain IR04_RS12850 PF14539 Domain of unknown function (DUF4442) IR04_RS12855 PF00793 DAHP synthetase I family IR04_RS12860 PF04461 Protein of unknown function (DUF520) IR04_RS12865 PF02146 Sir2 family IR04_RS12875 PF01292 Prokaryotic cytochrome b561 IR04_RS12880 PF13247 4Fe-4S dicluster domain IR04_RS12885 PF00384 Molybdopterin oxidoreductase IR04_RS12885 PF01568 Molydopterin dinucleotide binding domain IR04_RS12885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IR04_RS12890 PF10518 TAT (twin-arginine translocation) pathway signal sequence IR04_RS12895 PF02613 Nitrate reductase delta subunit IR04_RS12900 PF00037 4Fe-4S binding domain IR04_RS12900 PF12837 4Fe-4S binding domain IR04_RS12900 PF12838 4Fe-4S dicluster domain IR04_RS12905 PF11748 IR04_RS12905 IR04_RS12910 PF11749 IR04_RS12910 IR04_RS12915 PF02634 FdhD/NarQ family IR04_RS12920 PF00005 ABC transporter IR04_RS12920 PF12848 ABC transporter IR04_RS12925 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS12925 PF00672 HAMP domain IR04_RS12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS12925 PF17202 IR04_RS12925 IR04_RS12930 PF00072 Response regulator receiver domain IR04_RS12930 PF00158 Sigma-54 interaction domain IR04_RS12930 PF02954 Bacterial regulatory protein, Fis family IR04_RS12935 PF12849 PBP superfamily domain IR04_RS12940 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS12945 PF00005 ABC transporter IR04_RS12950 PF12804 MobA-like NTP transferase domain IR04_RS12955 PF00994 Probable molybdopterin binding domain IR04_RS12955 PF03205 Molybdopterin guanine dinucleotide synthesis protein B IR04_RS12955 PF03453 MoeA N-terminal region (domain I and II) IR04_RS12955 PF03454 MoeA C-terminal region (domain IV) IR04_RS12960 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS12975 PF11173 IR04_RS12975 IR04_RS12980 PF00480 ROK family IR04_RS12985 PF03942 IR04_RS12985 IR04_RS12990 PF04116 IR04_RS12990 IR04_RS12995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS13000 PF00877 NlpC/P60 family IR04_RS13005 PF12290 IR04_RS13005 IR04_RS13015 PF14255 IR04_RS13015 IR04_RS13020 PF01554 MatE IR04_RS13025 PF11279 IR04_RS13025 IR04_RS13030 PF01068 ATP dependent DNA ligase domain IR04_RS13030 PF14743 DNA ligase OB-like domain IR04_RS13040 PF03544 Gram-negative bacterial TonB protein C-terminal IR04_RS13045 PF02472 Biopolymer transport protein ExbD/TolR IR04_RS13050 PF01618 IR04_RS13050 IR04_RS13055 PF01618 IR04_RS13055 IR04_RS13060 PF11932 IR04_RS13060 IR04_RS13065 PF13416 Bacterial extracellular solute-binding protein IR04_RS13070 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS13075 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS13080 PF00005 ABC transporter IR04_RS13085 PF00455 IR04_RS13085 IR04_RS13085 PF08220 DeoR-like helix-turn-helix domain IR04_RS13090 PF03009 Glycerophosphoryl diester phosphodiesterase family IR04_RS13095 PF04074 Domain of unknown function (DUF386) IR04_RS13100 PF01042 Endoribonuclease L-PSP IR04_RS13105 PF00356 Bacterial regulatory proteins, lacI family IR04_RS13105 PF13377 Periplasmic binding protein-like domain IR04_RS13110 PF00232 Glycosyl hydrolase family 1 IR04_RS13120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS13120 PF03466 LysR substrate binding domain IR04_RS13125 PF00753 Metallo-beta-lactamase superfamily IR04_RS13130 PF16576 IR04_RS13130 IR04_RS13135 PF02321 Outer membrane efflux protein IR04_RS13140 PF02687 IR04_RS13140 IR04_RS13140 PF12704 MacB-like periplasmic core domain IR04_RS13145 PF02687 IR04_RS13145 IR04_RS13145 PF12704 MacB-like periplasmic core domain IR04_RS13150 PF00005 ABC transporter IR04_RS13155 PF02322 IR04_RS13155 IR04_RS13160 PF01654 IR04_RS13160 IR04_RS13170 PF00206 Lyase IR04_RS13170 PF10415 Fumarase C C-terminus IR04_RS13175 PF04342 IR04_RS13175 IR04_RS13180 PF09900 IR04_RS13180 IR04_RS13185 PF04266 ASCH domain IR04_RS13190 PF03279 IR04_RS13190 IR04_RS13200 PF00501 AMP-binding enzyme IR04_RS13205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS13205 PF03466 LysR substrate binding domain IR04_RS13210 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains IR04_RS13215 PF10070 IR04_RS13215 IR04_RS13220 PF00080 Copper/zinc superoxide dismutase (SODC) IR04_RS13225 PF12796 Ankyrin repeats (3 copies) IR04_RS13235 PF04224 IR04_RS13235 IR04_RS13240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS13240 PF03466 LysR substrate binding domain IR04_RS13250 PF00205 Thiamine pyrophosphate enzyme, central domain IR04_RS13250 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR04_RS13250 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR04_RS13255 PF13561 Enoyl-(Acyl carrier protein) reductase IR04_RS13260 PF00563 EAL domain IR04_RS13265 PF00990 GGDEF domain IR04_RS13270 PF01263 Aldose 1-epimerase IR04_RS13275 PF00288 GHMP kinases N terminal domain IR04_RS13275 PF08544 GHMP kinases C terminal IR04_RS13275 PF10509 Galactokinase galactose-binding signature IR04_RS13280 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IR04_RS13280 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IR04_RS13285 PF07690 Major Facilitator Superfamily IR04_RS13290 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS13305 PF00990 GGDEF domain IR04_RS13310 PF10881 IR04_RS13310 IR04_RS13320 PF00072 Response regulator receiver domain IR04_RS13320 PF01584 CheW-like domain IR04_RS13325 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS13330 PF00072 Response regulator receiver domain IR04_RS13330 PF12431 IR04_RS13330 IR04_RS13335 PF00989 PAS fold IR04_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS13335 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IR04_RS13335 PF17203 IR04_RS13335 IR04_RS13345 PF02321 Outer membrane efflux protein IR04_RS13350 PF16576 IR04_RS13350 IR04_RS13355 PF12698 ABC-2 family transporter protein IR04_RS13360 PF12698 ABC-2 family transporter protein IR04_RS13365 PF13671 AAA domain IR04_RS13370 PF04204 Homoserine O-succinyltransferase IR04_RS13375 PF13424 Tetratricopeptide repeat IR04_RS13385 PF05971 Protein of unknown function (DUF890) IR04_RS13390 PF01863 Protein of unknown function DUF45 IR04_RS13395 PF00462 Glutaredoxin IR04_RS13400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS13400 PF03466 LysR substrate binding domain IR04_RS13405 PF07690 Major Facilitator Superfamily IR04_RS13410 PF07209 IR04_RS13410 IR04_RS13420 PF02321 Outer membrane efflux protein IR04_RS13425 PF00691 OmpA family IR04_RS13430 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IR04_RS13435 PF03435 Saccharopine dehydrogenase IR04_RS13435 PF16653 IR04_RS13435 IR04_RS13440 PF00202 Aminotransferase class-III IR04_RS13440 PF00282 Pyridoxal-dependent decarboxylase conserved domain IR04_RS13445 PF06965 Na+/H+ antiporter 1 IR04_RS13450 PF07143 Hydroxyneurosporene synthase (CrtC) IR04_RS13450 PF17186 IR04_RS13450 IR04_RS13455 PF02687 IR04_RS13455 IR04_RS13460 PF00005 ABC transporter IR04_RS13465 PF01554 MatE IR04_RS13470 PF11066 IR04_RS13470 IR04_RS13470 PF13460 NADH(P)-binding IR04_RS13475 PF11140 IR04_RS13475 IR04_RS13480 PF07690 Major Facilitator Superfamily IR04_RS13485 PF00849 RNA pseudouridylate synthase IR04_RS13485 PF01479 S4 domain IR04_RS13490 PF00271 Helicase conserved C-terminal domain IR04_RS13490 PF04851 Type III restriction enzyme, res subunit IR04_RS13500 PF00072 Response regulator receiver domain IR04_RS13500 PF00486 Transcriptional regulatory protein, C terminal IR04_RS13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS13510 PF01386 Ribosomal L25p family IR04_RS13515 PF00563 EAL domain IR04_RS13520 PF12614 IR04_RS13520 IR04_RS13530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS13530 PF00672 HAMP domain IR04_RS13530 PF12729 IR04_RS13530 IR04_RS13535 PF11301 IR04_RS13535 IR04_RS13540 PF13419 Haloacid dehalogenase-like hydrolase IR04_RS13550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR04_RS13550 PF12793 IR04_RS13550 IR04_RS13555 PF00089 Trypsin IR04_RS13560 PF01752 Collagenase IR04_RS13560 PF04151 Bacterial pre-peptidase C-terminal domain IR04_RS13560 PF08453 Peptidase family M9 N-terminal IR04_RS13565 PF00072 Response regulator receiver domain IR04_RS13570 PF00072 Response regulator receiver domain IR04_RS13570 PF00196 Bacterial regulatory proteins, luxR family IR04_RS13570 PF00563 EAL domain IR04_RS13575 PF00072 Response regulator receiver domain IR04_RS13575 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS13575 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS13575 PF01627 Hpt domain IR04_RS13575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS13580 PF00571 CBS domain IR04_RS13580 PF01769 Divalent cation transporter IR04_RS13585 PF00892 EamA-like transporter family IR04_RS13590 PF03222 Tryptophan/tyrosine permease family IR04_RS13595 PF13437 HlyD family secretion protein IR04_RS13600 PF00005 ABC transporter IR04_RS13605 PF12698 ABC-2 family transporter protein IR04_RS13615 PF06945 IR04_RS13615 IR04_RS13620 PF03724 META domain IR04_RS13625 PF13416 Bacterial extracellular solute-binding protein IR04_RS13630 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS13635 PF00005 ABC transporter IR04_RS13640 PF01066 CDP-alcohol phosphatidyltransferase IR04_RS13645 PF00849 RNA pseudouridylate synthase IR04_RS13650 PF00209 Sodium:neurotransmitter symporter family IR04_RS13655 PF13091 PLD-like domain IR04_RS13655 PF13396 IR04_RS13655 IR04_RS13660 PF01053 Cys/Met metabolism PLP-dependent enzyme IR04_RS13665 PF03352 Methyladenine glycosylase IR04_RS13670 PF00873 AcrB/AcrD/AcrF family IR04_RS13675 PF13437 HlyD family secretion protein IR04_RS13675 PF13533 Biotin-lipoyl like IR04_RS13680 PF16576 IR04_RS13680 IR04_RS13685 PF04024 IR04_RS13685 IR04_RS13690 PF06667 IR04_RS13690 IR04_RS13695 PF04012 IR04_RS13695 IR04_RS13700 PF00158 Sigma-54 interaction domain IR04_RS13700 PF02954 Bacterial regulatory protein, Fis family IR04_RS13705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IR04_RS13710 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS13715 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS13715 PF12911 IR04_RS13715 IR04_RS13720 PF00005 ABC transporter IR04_RS13720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IR04_RS13725 PF00005 ABC transporter IR04_RS13730 PF11150 IR04_RS13730 IR04_RS13735 PF11042 IR04_RS13735 IR04_RS13740 PF01368 DHH family IR04_RS13740 PF02833 DHHA2 domain IR04_RS13745 PF11449 IR04_RS13745 IR04_RS13755 PF02065 Melibiase IR04_RS13760 PF00384 Molybdopterin oxidoreductase IR04_RS13760 PF01568 Molydopterin dinucleotide binding domain IR04_RS13765 PF03264 NapC/NirT cytochrome c family, N-terminal region IR04_RS13770 PF06796 IR04_RS13770 IR04_RS13780 PF01226 Formate/nitrite transporter IR04_RS13785 PF06146 IR04_RS13785 IR04_RS13790 PF13460 NADH(P)-binding IR04_RS13795 PF02698 DUF218 domain IR04_RS13805 PF04279 IR04_RS13805 IR04_RS13810 PF03061 Thioesterase superfamily IR04_RS13815 PF03795 YCII-related domain IR04_RS13820 PF16549 IR04_RS13820 IR04_RS13825 PF01717 Cobalamin-independent synthase, Catalytic domain IR04_RS13825 PF08267 Cobalamin-independent synthase, N-terminal domain IR04_RS13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS13830 PF03466 LysR substrate binding domain IR04_RS13835 PF14056 IR04_RS13835 IR04_RS13845 PF00675 Insulinase (Peptidase family M16) IR04_RS13845 PF05193 Peptidase M16 inactive domain IR04_RS13850 PF00563 EAL domain IR04_RS13850 PF13426 PAS domain IR04_RS13855 PF04055 Radical SAM superfamily IR04_RS13855 PF08497 IR04_RS13855 IR04_RS13855 PF11842 IR04_RS13855 IR04_RS13860 PF01810 IR04_RS13860 IR04_RS13865 PF01037 AsnC family IR04_RS13865 PF13412 Winged helix-turn-helix DNA-binding IR04_RS13870 PF04310 MukB N-terminal IR04_RS13870 PF13558 Putative exonuclease SbcCD, C subunit IR04_RS13870 PF16330 IR04_RS13870 IR04_RS13875 PF04288 MukE-like family IR04_RS13885 PF08241 Methyltransferase domain IR04_RS13890 PF02698 DUF218 domain IR04_RS13895 PF00072 Response regulator receiver domain IR04_RS13895 PF00486 Transcriptional regulatory protein, C terminal IR04_RS13900 PF02613 Nitrate reductase delta subunit IR04_RS13905 PF00356 Bacterial regulatory proteins, lacI family IR04_RS13905 PF13377 Periplasmic binding protein-like domain IR04_RS13910 PF04993 TfoX N-terminal domain IR04_RS13910 PF04994 TfoX C-terminal domain IR04_RS13915 PF09335 IR04_RS13915 IR04_RS13920 PF09413 Domain of unknown function (DUF2007) IR04_RS13925 PF00561 alpha/beta hydrolase fold IR04_RS13930 PF00534 Glycosyl transferases group 1 IR04_RS13930 PF08323 Starch synthase catalytic domain IR04_RS13935 PF00483 Nucleotidyl transferase IR04_RS13940 PF01131 DNA topoisomerase IR04_RS13940 PF01396 IR04_RS13940 IR04_RS13940 PF01751 Toprim domain IR04_RS13940 PF08272 Topoisomerase I zinc-ribbon-like IR04_RS13945 PF10692 Protein of unknown function (DUF2498) IR04_RS13950 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IR04_RS13960 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IR04_RS13965 PF04376 IR04_RS13965 IR04_RS13965 PF04377 IR04_RS13965 IR04_RS13970 PF01176 Translation initiation factor 1A / IF-1 IR04_RS13975 PF07055 Enoyl reductase FAD binding domain IR04_RS13975 PF12241 Trans-2-enoyl-CoA reductase catalytic region IR04_RS13980 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IR04_RS13985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IR04_RS13985 PF02770 Acyl-CoA dehydrogenase, middle domain IR04_RS13985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IR04_RS13985 PF09317 IR04_RS13985 IR04_RS13990 PF00440 Bacterial regulatory proteins, tetR family IR04_RS14000 PF07383 IR04_RS14000 IR04_RS14005 PF00171 Aldehyde dehydrogenase family IR04_RS14010 PF00440 Bacterial regulatory proteins, tetR family IR04_RS14010 PF14246 AefR-like transcriptional repressor, C-terminal region IR04_RS14025 PF01103 Surface antigen IR04_RS14030 PF13265 IR04_RS14030 IR04_RS14035 PF00924 Mechanosensitive ion channel IR04_RS14040 PF04403 IR04_RS14040 IR04_RS14045 PF02470 IR04_RS14045 IR04_RS14050 PF03886 Protein of unknown function (DUF330) IR04_RS14055 PF16576 IR04_RS14055 IR04_RS14060 PF00873 AcrB/AcrD/AcrF family IR04_RS14070 PF00589 Phage integrase family IR04_RS14070 PF13356 Domain of unknown function (DUF4102) IR04_RS14080 PF00176 SNF2 family N-terminal domain IR04_RS14080 PF00271 Helicase conserved C-terminal domain IR04_RS14080 PF04471 Restriction endonuclease IR04_RS14085 PF15611 IR04_RS14085 IR04_RS14090 PF00691 OmpA family IR04_RS14100 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IR04_RS14100 PF04851 Type III restriction enzyme, res subunit IR04_RS14105 PF03235 IR04_RS14105 IR04_RS14105 PF07510 IR04_RS14105 IR04_RS14110 PF03235 IR04_RS14110 IR04_RS14115 PF01420 Type I restriction modification DNA specificity domain IR04_RS14120 PF02384 N-6 DNA Methylase IR04_RS14120 PF12161 HsdM N-terminal domain IR04_RS14135 PF13280 IR04_RS14135 IR04_RS14140 PF07646 Kelch motif IR04_RS14145 PF01344 Kelch motif IR04_RS14150 PF01380 SIS domain IR04_RS14150 PF01418 Helix-turn-helix domain, rpiR family IR04_RS14155 PF00701 Dihydrodipicolinate synthetase family IR04_RS14160 PF06808 IR04_RS14160 IR04_RS14165 PF04290 IR04_RS14165 IR04_RS14170 PF03480 Bacterial extracellular solute-binding protein, family 7 IR04_RS14180 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase IR04_RS14185 PF00480 ROK family IR04_RS14190 PF01979 Amidohydrolase family IR04_RS14200 PF05930 Prophage CP4-57 regulatory protein (AlpA) IR04_RS14205 PF04002 RadC-like JAB domain IR04_RS14215 PF00665 Integrase core domain IR04_RS14215 PF13276 IR04_RS14215 IR04_RS14220 PF01527 Transposase IR04_RS14230 PF10109 IR04_RS14230 IR04_RS14245 PF08765 Mor transcription activator family IR04_RS14250 PF08765 Mor transcription activator family IR04_RS14265 PF13401 AAA domain IR04_RS14270 PF00665 Integrase core domain IR04_RS14280 PF09339 IclR helix-turn-helix domain IR04_RS14305 PF10980 Protein of unknown function (DUF2787) IR04_RS14310 PF01926 50S ribosome-binding GTPase IR04_RS14320 PF05930 Prophage CP4-57 regulatory protein (AlpA) IR04_RS14325 PF11661 IR04_RS14325 IR04_RS14330 PF01936 NYN domain IR04_RS14335 PF04134 IR04_RS14335 IR04_RS14340 PF00875 DNA photolyase IR04_RS14340 PF03441 FAD binding domain of DNA photolyase IR04_RS14345 PF00106 short chain dehydrogenase IR04_RS14350 PF09905 Uncharacterized conserved protein (DUF2132) IR04_RS14355 PF00158 Sigma-54 interaction domain IR04_RS14355 PF01590 GAF domain IR04_RS14355 PF02954 Bacterial regulatory protein, Fis family IR04_RS14360 PF00171 Aldehyde dehydrogenase family IR04_RS14365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IR04_RS14370 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IR04_RS14375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IR04_RS14375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IR04_RS14375 PF02378 Phosphotransferase system, EIIC IR04_RS14380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IR04_RS14385 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IR04_RS14390 PF12833 Helix-turn-helix domain IR04_RS14395 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IR04_RS14395 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IR04_RS14395 PF02378 Phosphotransferase system, EIIC IR04_RS14400 PF01238 Phosphomannose isomerase type I IR04_RS14405 PF06610 IR04_RS14405 IR04_RS14410 PF00072 Response regulator receiver domain IR04_RS14410 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS14410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS14410 PF02743 Cache domain IR04_RS14415 PF03695 Uncharacterised protein family (UPF0149) IR04_RS14420 PF02445 Quinolinate synthetase A protein IR04_RS14425 PF13174 Tetratricopeptide repeat IR04_RS14425 PF13432 Tetratricopeptide repeat IR04_RS14425 PF16331 IR04_RS14425 IR04_RS14430 PF00691 OmpA family IR04_RS14435 PF04052 TolB amino-terminal domain IR04_RS14435 PF07676 WD40-like Beta Propeller Repeat IR04_RS14440 PF06519 TolA C-terminal IR04_RS14445 PF02472 Biopolymer transport protein ExbD/TolR IR04_RS14450 PF01618 IR04_RS14450 IR04_RS14455 PF03061 Thioesterase superfamily IR04_RS14460 PF09600 IR04_RS14460 IR04_RS14465 PF08173 IR04_RS14465 IR04_RS14470 PF02322 IR04_RS14470 IR04_RS14475 PF01654 IR04_RS14475 IR04_RS14485 PF01330 RuvA N terminal domain IR04_RS14485 PF07499 RuvA, C-terminal domain IR04_RS14485 PF14520 Helix-hairpin-helix domain IR04_RS14490 PF02075 Crossover junction endodeoxyribonuclease RuvC IR04_RS14495 PF01406 tRNA synthetases class I (C) catalytic domain IR04_RS14495 PF09190 DALR domain IR04_RS14500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IR04_RS14505 PF00149 Calcineurin-like phosphoesterase IR04_RS14510 PF00563 EAL domain IR04_RS14510 PF08668 HDOD domain IR04_RS14515 PF02810 SEC-C motif IR04_RS14520 PF09829 IR04_RS14520 IR04_RS14525 PF13609 Gram-negative porin IR04_RS14530 PF06733 DEAD_2 IR04_RS14530 PF13307 Helicase C-terminal domain IR04_RS14535 PF01925 IR04_RS14535 IR04_RS14540 PF07445 Primosomal replication protein priB and priC IR04_RS14545 PF10689 IR04_RS14545 IR04_RS14550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS14550 PF00672 HAMP domain IR04_RS14555 PF03372 Endonuclease/Exonuclease/phosphatase family IR04_RS14560 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS14565 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS14570 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS14575 PF00005 ABC transporter IR04_RS14580 PF11840 IR04_RS14580 IR04_RS14585 PF01228 Glycine radical IR04_RS14585 PF02901 Pyruvate formate lyase IR04_RS14590 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) IR04_RS14595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS14595 PF00672 HAMP domain IR04_RS14600 PF04055 Radical SAM superfamily IR04_RS14600 PF13353 4Fe-4S single cluster domain IR04_RS14605 PF01891 Cobalt uptake substrate-specific transmembrane region IR04_RS14610 PF03887 YfbU domain IR04_RS14615 PF06798 IR04_RS14615 IR04_RS14615 PF08298 PrkA AAA domain IR04_RS14620 PF04285 IR04_RS14620 IR04_RS14625 PF04293 IR04_RS14625 IR04_RS14630 PF02348 Cytidylyltransferase IR04_RS14635 PF03966 Trm112p-like protein IR04_RS14640 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IR04_RS14645 PF00005 ABC transporter IR04_RS14645 PF00664 ABC transporter transmembrane region IR04_RS14650 PF00753 Metallo-beta-lactamase superfamily IR04_RS14650 PF03772 IR04_RS14650 IR04_RS14650 PF13567 IR04_RS14650 IR04_RS14655 PF09835 IR04_RS14655 IR04_RS14660 PF02687 IR04_RS14660 IR04_RS14660 PF12704 MacB-like periplasmic core domain IR04_RS14665 PF00005 ABC transporter IR04_RS14670 PF02687 IR04_RS14670 IR04_RS14670 PF12704 MacB-like periplasmic core domain IR04_RS14680 PF00270 DEAD/DEAH box helicase IR04_RS14680 PF00271 Helicase conserved C-terminal domain IR04_RS14680 PF02559 CarD-like/TRCF domain IR04_RS14680 PF03461 TRCF domain IR04_RS14685 PF10972 IR04_RS14685 IR04_RS14690 PF16458 IR04_RS14690 IR04_RS14695 PF13302 Acetyltransferase (GNAT) domain IR04_RS14700 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR04_RS14705 PF05728 Uncharacterised protein family (UPF0227) IR04_RS14710 PF01636 Phosphotransferase enzyme family IR04_RS14715 PF13036 Protein of unknown function (DUF3897) IR04_RS14720 PF07233 Protein of unknown function (DUF1425) IR04_RS14730 PF01230 HIT domain IR04_RS14735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS14735 PF00672 HAMP domain IR04_RS14740 PF09002 Domain of unknown function (DUF1887) IR04_RS14745 PF00392 Bacterial regulatory proteins, gntR family IR04_RS14745 PF07840 FadR C-terminal domain IR04_RS14750 PF06450 IR04_RS14750 IR04_RS14755 PF02600 Disulfide bond formation protein DsbB IR04_RS14760 PF01580 FtsK/SpoIIIE family IR04_RS14760 PF09397 Ftsk gamma domain IR04_RS14760 PF13491 IR04_RS14760 IR04_RS14765 PF01037 AsnC family IR04_RS14765 PF13412 Winged helix-turn-helix DNA-binding IR04_RS14770 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IR04_RS14770 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IR04_RS14775 PF13679 IR04_RS14775 IR04_RS14780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS14780 PF03466 LysR substrate binding domain IR04_RS14790 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IR04_RS14795 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IR04_RS14800 PF13176 Tetratricopeptide repeat IR04_RS14805 PF06305 IR04_RS14805 IR04_RS14810 PF00216 Bacterial DNA-binding protein IR04_RS14815 PF00575 S1 RNA binding domain IR04_RS14820 PF02224 Cytidylate kinase IR04_RS14825 PF12836 Helix-hairpin-helix motif IR04_RS14830 PF13616 PPIC-type PPIASE domain IR04_RS14830 PF13624 SurA N-terminal domain IR04_RS14835 PF00216 Bacterial DNA-binding protein IR04_RS14840 PF00004 ATPase family associated with various cellular activities (AAA) IR04_RS14840 PF02190 ATP-dependent protease La (LON) domain IR04_RS14840 PF05362 Lon protease (S16) C-terminal proteolytic domain IR04_RS14845 PF06689 ClpX C4-type zinc finger IR04_RS14845 PF07724 AAA domain (Cdc48 subfamily) IR04_RS14845 PF10431 C-terminal, D2-small domain, of ClpB protein IR04_RS14850 PF00574 Clp protease IR04_RS14855 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR04_RS14855 PF05697 Bacterial trigger factor protein (TF) IR04_RS14855 PF05698 Bacterial trigger factor protein (TF) C-terminus IR04_RS14865 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS14865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS14870 PF00072 Response regulator receiver domain IR04_RS14870 PF00158 Sigma-54 interaction domain IR04_RS14870 PF02954 Bacterial regulatory protein, Fis family IR04_RS14875 PF06808 IR04_RS14875 IR04_RS14880 PF04290 IR04_RS14880 IR04_RS14885 PF03480 Bacterial extracellular solute-binding protein, family 7 IR04_RS14890 PF02696 IR04_RS14890 IR04_RS14905 PF00563 EAL domain IR04_RS14905 PF00990 GGDEF domain IR04_RS14910 PF01066 CDP-alcohol phosphatidyltransferase IR04_RS14915 PF01148 Cytidylyltransferase family IR04_RS14920 PF01553 Acyltransferase IR04_RS14925 PF13279 Thioesterase-like superfamily IR04_RS14930 PF01810 IR04_RS14930 IR04_RS14935 PF12710 haloacid dehalogenase-like hydrolase IR04_RS14940 PF10129 IR04_RS14940 IR04_RS14950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IR04_RS14950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IR04_RS14955 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IR04_RS14960 PF01494 FAD binding domain IR04_RS14965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS14965 PF03466 LysR substrate binding domain IR04_RS14970 PF02668 Taurine catabolism dioxygenase TauD, TfdA family IR04_RS14970 PF05141 Pyoverdine/dityrosine biosynthesis protein IR04_RS14975 PF00384 Molybdopterin oxidoreductase IR04_RS14975 PF01568 Molydopterin dinucleotide binding domain IR04_RS14980 PF03264 NapC/NirT cytochrome c family, N-terminal region IR04_RS14985 PF00704 Glycosyl hydrolases family 18 IR04_RS14985 PF02839 Carbohydrate binding domain IR04_RS14990 PF01773 Na+ dependent nucleoside transporter N-terminus IR04_RS14990 PF07662 Na+ dependent nucleoside transporter C-terminus IR04_RS14990 PF07670 Nucleoside recognition IR04_RS14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS14995 PF03466 LysR substrate binding domain IR04_RS15000 PF13406 Transglycosylase SLT domain IR04_RS15005 PF05166 YcgL domain IR04_RS15010 PF03775 Septum formation inhibitor MinC, C-terminal domain IR04_RS15010 PF05209 Septum formation inhibitor MinC, N-terminal domain IR04_RS15015 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IR04_RS15020 PF03776 Septum formation topological specificity factor MinE IR04_RS15025 PF04170 NlpE N-terminal domain IR04_RS15030 PF06844 Protein of unknown function (DUF1244) IR04_RS15035 PF04280 Tim44-like domain IR04_RS15035 PF07466 IR04_RS15035 IR04_RS15040 PF13305 WHG domain IR04_RS15045 PF01553 Acyltransferase IR04_RS15045 PF07690 Major Facilitator Superfamily IR04_RS15055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS15055 PF00672 HAMP domain IR04_RS15060 PF01381 Helix-turn-helix IR04_RS15065 PF03594 IR04_RS15065 IR04_RS15070 PF00501 AMP-binding enzyme IR04_RS15075 PF13378 Enolase C-terminal domain-like IR04_RS15080 PF00378 Enoyl-CoA hydratase/isomerase family IR04_RS15085 PF12697 Alpha/beta hydrolase family IR04_RS15090 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR04_RS15090 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR04_RS15090 PF16582 IR04_RS15090 IR04_RS15095 PF00425 chorismate binding enzyme IR04_RS15100 PF00155 Aminotransferase class I and II IR04_RS15105 PF13023 HD domain IR04_RS15110 PF01966 HD domain IR04_RS15110 PF13286 Phosphohydrolase-associated domain IR04_RS15115 PF03942 IR04_RS15115 IR04_RS15120 PF01694 Rhomboid family IR04_RS15125 PF01432 Peptidase family M3 IR04_RS15130 PF00570 HRDC domain IR04_RS15130 PF01612 3'-5' exonuclease IR04_RS15135 PF00501 AMP-binding enzyme IR04_RS15135 PF13193 AMP-binding enzyme C-terminal domain IR04_RS15140 PF12697 Alpha/beta hydrolase family IR04_RS15145 PF03843 IR04_RS15145 IR04_RS15155 PF00814 Glycoprotease family IR04_RS15160 PF00270 DEAD/DEAH box helicase IR04_RS15160 PF13307 Helicase C-terminal domain IR04_RS15170 PF00551 Formyl transferase IR04_RS15170 PF01842 ACT domain IR04_RS15175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IR04_RS15175 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR04_RS15180 PF01343 Peptidase family S49 IR04_RS15185 PF00710 Asparaginase IR04_RS15190 PF07023 IR04_RS15190 IR04_RS15195 PF11207 IR04_RS15195 IR04_RS15200 PF01641 SelR domain IR04_RS15205 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IR04_RS15205 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IR04_RS15210 PF01263 Aldose 1-epimerase IR04_RS15215 PF11059 IR04_RS15215 IR04_RS15220 PF13649 Methyltransferase domain IR04_RS15235 PF00072 Response regulator receiver domain IR04_RS15235 PF01584 CheW-like domain IR04_RS15240 PF00480 ROK family IR04_RS15245 PF00224 Pyruvate kinase, barrel domain IR04_RS15245 PF02887 Pyruvate kinase, alpha/beta domain IR04_RS15250 PF01734 Patatin-like phospholipase IR04_RS15265 PF00209 Sodium:neurotransmitter symporter family IR04_RS15270 PF00367 phosphotransferase system, EIIB IR04_RS15270 PF02378 Phosphotransferase system, EIIC IR04_RS15275 PF01026 TatD related DNase IR04_RS15280 PF09115 DNA polymerase III, delta subunit, C terminal IR04_RS15280 PF13177 DNA polymerase III, delta subunit IR04_RS15285 PF02223 Thymidylate kinase IR04_RS15290 PF02618 YceG-like family IR04_RS15295 PF01063 Aminotransferase class IV IR04_RS15300 PF00109 Beta-ketoacyl synthase, N-terminal domain IR04_RS15300 PF02801 Beta-ketoacyl synthase, C-terminal domain IR04_RS15305 PF00550 Phosphopantetheine attachment site IR04_RS15310 PF13561 Enoyl-(Acyl carrier protein) reductase IR04_RS15315 PF00698 Acyl transferase domain IR04_RS15320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IR04_RS15320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IR04_RS15325 PF02504 Fatty acid synthesis protein IR04_RS15330 PF01783 Ribosomal L32p protein family IR04_RS15335 PF02620 IR04_RS15335 IR04_RS15340 PF02545 Maf-like protein IR04_RS15345 PF00849 RNA pseudouridylate synthase IR04_RS15345 PF01479 S4 domain IR04_RS15360 PF00575 S1 RNA binding domain IR04_RS15360 PF10150 Ribonuclease E/G family IR04_RS15365 PF00916 IR04_RS15365 IR04_RS15365 PF01740 STAS domain IR04_RS15375 PF00171 Aldehyde dehydrogenase family IR04_RS15375 PF00465 Iron-containing alcohol dehydrogenase IR04_RS15380 PF01914 IR04_RS15380 IR04_RS15385 PF01118 Semialdehyde dehydrogenase, NAD binding domain IR04_RS15385 PF02774 Semialdehyde dehydrogenase, dimerisation domain IR04_RS15390 PF03553 IR04_RS15390 IR04_RS15395 PF01627 Hpt domain IR04_RS15400 PF04245 IR04_RS15400 IR04_RS15405 PF07208 Protein of unknown function (DUF1414) IR04_RS15410 PF00884 Sulfatase IR04_RS15410 PF11893 IR04_RS15410 IR04_RS15425 PF00850 Histone deacetylase domain IR04_RS15430 PF01131 DNA topoisomerase IR04_RS15430 PF01751 Toprim domain IR04_RS15435 PF00462 Glutaredoxin IR04_RS15440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IR04_RS15440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IR04_RS15445 PF11993 IR04_RS15445 IR04_RS15450 PF00106 short chain dehydrogenase IR04_RS15455 PF04333 IR04_RS15455 IR04_RS15460 PF14559 Tetratricopeptide repeat IR04_RS15465 PF03918 Cytochrome C biogenesis protein IR04_RS15470 PF08534 Redoxin IR04_RS15475 PF01578 IR04_RS15475 IR04_RS15475 PF16327 IR04_RS15475 IR04_RS15480 PF03100 CcmE IR04_RS15485 PF04995 IR04_RS15485 IR04_RS15490 PF01578 IR04_RS15490 IR04_RS15495 PF03379 IR04_RS15495 IR04_RS15500 PF00005 ABC transporter IR04_RS15505 PF10975 IR04_RS15505 IR04_RS15510 PF01584 CheW-like domain IR04_RS15515 PF01584 CheW-like domain IR04_RS15520 PF13614 AAA domain IR04_RS15525 PF00072 Response regulator receiver domain IR04_RS15525 PF01339 CheB methylesterase IR04_RS15530 PF01584 CheW-like domain IR04_RS15530 PF01627 Hpt domain IR04_RS15530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS15530 PF02895 Signal transducing histidine kinase, homodimeric domain IR04_RS15535 PF04344 Chemotaxis phosphatase, CheZ IR04_RS15540 PF00072 Response regulator receiver domain IR04_RS15545 PF04539 Sigma-70 region 3 IR04_RS15545 PF04542 Sigma-70 region 2 IR04_RS15545 PF04545 Sigma-70, region 4 IR04_RS15550 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IR04_RS15555 PF00448 SRP54-type protein, GTPase domain IR04_RS15560 PF00771 FHIPEP family IR04_RS15565 PF00300 Histidine phosphatase superfamily (branch 1) IR04_RS15570 PF00675 Insulinase (Peptidase family M16) IR04_RS15570 PF05193 Peptidase M16 inactive domain IR04_RS15570 PF16187 IR04_RS15570 IR04_RS15575 PF06185 YecM protein IR04_RS15580 PF00750 tRNA synthetases class I (R) IR04_RS15580 PF03485 Arginyl tRNA synthetase N terminal domain IR04_RS15580 PF05746 DALR anticodon binding domain IR04_RS15585 PF01230 HIT domain IR04_RS15590 PF09012 FeoC like transcriptional regulator IR04_RS15595 PF02421 Ferrous iron transport protein B IR04_RS15595 PF07664 IR04_RS15595 IR04_RS15595 PF07670 Nucleoside recognition IR04_RS15600 PF04023 FeoA domain IR04_RS15605 PF12833 Helix-turn-helix domain IR04_RS15610 PF01297 Periplasmic solute binding protein family IR04_RS15615 PF00005 ABC transporter IR04_RS15620 PF00950 IR04_RS15620 IR04_RS15625 PF00549 CoA-ligase IR04_RS15625 PF02629 CoA binding domain IR04_RS15630 PF00549 CoA-ligase IR04_RS15630 PF08442 ATP-grasp domain IR04_RS15635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IR04_RS15635 PF00364 Biotin-requiring enzyme IR04_RS15635 PF02817 e3 binding domain IR04_RS15640 PF00676 Dehydrogenase E1 component IR04_RS15640 PF02779 Transketolase, pyrimidine binding domain IR04_RS15640 PF16078 IR04_RS15640 IR04_RS15640 PF16870 IR04_RS15640 IR04_RS15645 PF13085 2Fe-2S iron-sulfur cluster binding domain IR04_RS15645 PF13534 4Fe-4S dicluster domain IR04_RS15650 PF00890 FAD binding domain IR04_RS15650 PF02910 Fumarate reductase flavoprotein C-term IR04_RS15655 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IR04_RS15660 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IR04_RS15665 PF00285 Citrate synthase IR04_RS15670 PF01784 NIF3 (NGG1p interacting factor 3) IR04_RS15675 PF08907 IR04_RS15675 IR04_RS15680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IR04_RS15680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IR04_RS15680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IR04_RS15680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IR04_RS15685 PF03925 SeqA protein IR04_RS15690 PF12697 Alpha/beta hydrolase family IR04_RS15695 PF10981 IR04_RS15695 IR04_RS15700 PF00258 Flavodoxin IR04_RS15705 PF04172 IR04_RS15705 IR04_RS15710 PF03788 IR04_RS15710 IR04_RS15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS15715 PF03466 LysR substrate binding domain IR04_RS15725 PF01475 Ferric uptake regulator family IR04_RS15730 PF01118 Semialdehyde dehydrogenase, NAD binding domain IR04_RS15730 PF02774 Semialdehyde dehydrogenase, dimerisation domain IR04_RS15735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IR04_RS15735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IR04_RS15735 PF11890 Domain of unknown function (DUF3410) IR04_RS15740 PF00109 Beta-ketoacyl synthase, N-terminal domain IR04_RS15740 PF02801 Beta-ketoacyl synthase, C-terminal domain IR04_RS15745 PF01266 FAD dependent oxidoreductase IR04_RS15745 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IR04_RS15750 PF03358 NADPH-dependent FMN reductase IR04_RS15755 PF08891 IR04_RS15755 IR04_RS15760 PF04315 IR04_RS15760 IR04_RS15765 PF03458 IR04_RS15765 IR04_RS15770 PF01264 Chorismate synthase IR04_RS15780 PF05175 Methyltransferase small domain IR04_RS15785 PF01713 Smr domain IR04_RS15790 PF01312 FlhB HrpN YscU SpaS Family IR04_RS15795 PF01311 IR04_RS15795 IR04_RS15800 PF01313 IR04_RS15800 IR04_RS15805 PF00813 IR04_RS15805 IR04_RS15810 PF04347 IR04_RS15810 IR04_RS15815 PF01052 Surface presentation of antigens (SPOA) IR04_RS15820 PF01052 Surface presentation of antigens (SPOA) IR04_RS15820 PF02154 Flagellar motor switch protein FliM IR04_RS15825 PF03748 IR04_RS15825 IR04_RS15830 PF02120 Flagellar hook-length control protein FliK IR04_RS15835 PF02050 Flagellar FliJ protein IR04_RS15840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IR04_RS15845 PF02108 IR04_RS15845 IR04_RS15850 PF01706 FliG C-terminal domain IR04_RS15850 PF14841 FliG middle domain IR04_RS15850 PF14842 FliG N-terminal domain IR04_RS15855 PF01514 Secretory protein of YscJ/FliF family IR04_RS15855 PF08345 IR04_RS15855 IR04_RS15860 PF02049 IR04_RS15860 IR04_RS15865 PF00072 Response regulator receiver domain IR04_RS15865 PF00158 Sigma-54 interaction domain IR04_RS15865 PF02954 Bacterial regulatory protein, Fis family IR04_RS15870 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS15870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS15870 PF13188 PAS domain IR04_RS15875 PF00158 Sigma-54 interaction domain IR04_RS15875 PF02954 Bacterial regulatory protein, Fis family IR04_RS15875 PF06490 IR04_RS15875 IR04_RS15880 PF02561 Flagellar protein FliS IR04_RS15890 PF02465 IR04_RS15890 IR04_RS15890 PF07195 IR04_RS15890 IR04_RS15890 PF07196 Flagellin hook IN motif IR04_RS15895 PF03646 FlaG protein IR04_RS15900 PF00669 Bacterial flagellin N-terminal helical region IR04_RS15900 PF00700 Bacterial flagellin C-terminal helical region IR04_RS15900 PF07196 Flagellin hook IN motif IR04_RS15905 PF00669 Bacterial flagellin N-terminal helical region IR04_RS15905 PF00700 Bacterial flagellin C-terminal helical region IR04_RS15905 PF07196 Flagellin hook IN motif IR04_RS15910 PF00669 Bacterial flagellin N-terminal helical region IR04_RS15910 PF00700 Bacterial flagellin C-terminal helical region IR04_RS15910 PF07196 Flagellin hook IN motif IR04_RS15915 PF04261 Dyp-type peroxidase family IR04_RS15920 PF11143 IR04_RS15920 IR04_RS15925 PF11169 IR04_RS15925 IR04_RS15930 PF09904 Winged helix-turn helix IR04_RS15935 PF03960 ArsC family IR04_RS15940 PF01546 Peptidase family M20/M25/M40 IR04_RS15940 PF07687 Peptidase dimerisation domain IR04_RS15945 PF02557 D-alanyl-D-alanine carboxypeptidase IR04_RS15950 PF11446 IR04_RS15950 IR04_RS15955 PF06804 NlpB/DapX lipoprotein IR04_RS15960 PF00701 Dihydrodipicolinate synthetase family IR04_RS15965 PF13740 ACT domain IR04_RS15970 PF00578 AhpC/TSA family IR04_RS15975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS15975 PF00672 HAMP domain IR04_RS15975 PF02743 Cache domain IR04_RS15980 PF01594 IR04_RS15980 IR04_RS15985 PF01206 Sulfurtransferase TusA IR04_RS15990 PF01435 Peptidase family M48 IR04_RS15990 PF13181 Tetratricopeptide repeat IR04_RS15990 PF14559 Tetratricopeptide repeat IR04_RS15995 PF03960 ArsC family IR04_RS16000 PF03358 NADPH-dependent FMN reductase IR04_RS16005 PF09842 IR04_RS16005 IR04_RS16010 PF09839 IR04_RS16010 IR04_RS16015 PF00860 Permease family IR04_RS16020 PF04073 Aminoacyl-tRNA editing domain IR04_RS16025 PF00149 Calcineurin-like phosphoesterase IR04_RS16025 PF02872 5'-nucleotidase, C-terminal domain IR04_RS16030 PF00793 DAHP synthetase I family IR04_RS16035 PF13369 IR04_RS16035 IR04_RS16035 PF13371 Tetratricopeptide repeat IR04_RS16040 PF04247 IR04_RS16040 IR04_RS16045 PF13847 Methyltransferase domain IR04_RS16050 PF00472 RF-1 domain IR04_RS16050 PF03462 PCRF domain IR04_RS16055 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IR04_RS16055 PF01488 Shikimate / quinate 5-dehydrogenase IR04_RS16055 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IR04_RS16060 PF03550 Outer membrane lipoprotein LolB IR04_RS16065 PF00288 GHMP kinases N terminal domain IR04_RS16065 PF08544 GHMP kinases C terminal IR04_RS16070 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IR04_RS16070 PF14572 Phosphoribosyl synthetase-associated domain IR04_RS16075 PF01195 Peptidyl-tRNA hydrolase IR04_RS16080 PF01926 50S ribosome-binding GTPase IR04_RS16080 PF06071 Protein of unknown function (DUF933) IR04_RS16165 PF00669 Bacterial flagellin N-terminal helical region IR04_RS16165 PF00700 Bacterial flagellin C-terminal helical region IR04_RS16165 PF07196 Flagellin hook IN motif IR04_RS16170 PF00669 Bacterial flagellin N-terminal helical region IR04_RS16170 PF00700 Bacterial flagellin C-terminal helical region IR04_RS16170 PF07196 Flagellin hook IN motif IR04_RS16180 PF00669 Bacterial flagellin N-terminal helical region IR04_RS16180 PF00700 Bacterial flagellin C-terminal helical region IR04_RS16185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR04_RS16190 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IR04_RS16190 PF10135 IR04_RS16190 IR04_RS16195 PF02119 IR04_RS16195 IR04_RS16200 PF02107 IR04_RS16200 IR04_RS16205 PF00460 Flagella basal body rod protein IR04_RS16205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR04_RS16210 PF00460 Flagella basal body rod protein IR04_RS16210 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR04_RS16215 PF00460 Flagella basal body rod protein IR04_RS16215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR04_RS16215 PF07559 Flagellar basal body protein FlaE IR04_RS16220 PF03963 IR04_RS16220 IR04_RS16220 PF13860 FlgD Ig-like domain IR04_RS16220 PF13861 FlgD Tudor-like domain IR04_RS16225 PF00460 Flagella basal body rod protein IR04_RS16225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IR04_RS16235 PF01739 CheR methyltransferase, SAM binding domain IR04_RS16235 PF03705 CheR methyltransferase, all-alpha domain IR04_RS16240 PF00072 Response regulator receiver domain IR04_RS16240 PF01584 CheW-like domain IR04_RS16245 PF13144 SAF-like IR04_RS16250 PF04316 Anti-sigma-28 factor, FlgM IR04_RS16255 PF05130 FlgN protein IR04_RS16260 PF02169 LPP20 lipoprotein IR04_RS16270 PF16538 IR04_RS16270 IR04_RS16270 PF16539 IR04_RS16270 IR04_RS16270 PF16548 IR04_RS16270 IR04_RS16275 PF00501 AMP-binding enzyme IR04_RS16275 PF00550 Phosphopantetheine attachment site IR04_RS16275 PF00668 Condensation domain IR04_RS16275 PF08415 IR04_RS16275 IR04_RS16275 PF13193 AMP-binding enzyme C-terminal domain IR04_RS16280 PF04954 Siderophore-interacting protein IR04_RS16280 PF08021 Siderophore-interacting FAD-binding domain IR04_RS16285 PF00593 TonB dependent receptor IR04_RS16285 PF07715 TonB-dependent Receptor Plug Domain IR04_RS16295 PF00691 OmpA family IR04_RS16295 PF01389 OmpA-like transmembrane domain IR04_RS16300 PF00749 tRNA synthetases class I (E and Q), catalytic domain IR04_RS16305 PF00122 E1-E2 ATPase IR04_RS16305 PF00403 Heavy-metal-associated domain IR04_RS16305 PF00702 haloacid dehalogenase-like hydrolase IR04_RS16310 PF04214 IR04_RS16310 IR04_RS16315 PF00728 Glycosyl hydrolase family 20, catalytic domain IR04_RS16315 PF02838 Glycosyl hydrolase family 20, domain 2 IR04_RS16315 PF03173 Putative carbohydrate binding domain IR04_RS16315 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain IR04_RS16320 PF01963 IR04_RS16320 IR04_RS16330 PF11346 IR04_RS16330 IR04_RS16335 PF01713 Smr domain IR04_RS16340 PF00849 RNA pseudouridylate synthase IR04_RS16340 PF01479 S4 domain IR04_RS16345 PF00990 GGDEF domain IR04_RS16345 PF02743 Cache domain IR04_RS16350 PF14681 Uracil phosphoribosyltransferase IR04_RS16355 PF00586 AIR synthase related protein, N-terminal domain IR04_RS16355 PF02769 AIR synthase related protein, C-terminal domain IR04_RS16360 PF00551 Formyl transferase IR04_RS16365 PF13230 Glutamine amidotransferases class-II IR04_RS16370 PF13580 SIS domain IR04_RS16375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IR04_RS16375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IR04_RS16375 PF09317 IR04_RS16375 IR04_RS16385 PF00929 Exonuclease IR04_RS16390 PF00075 RNase H IR04_RS16395 PF08241 Methyltransferase domain IR04_RS16400 PF00753 Metallo-beta-lactamase superfamily IR04_RS16400 PF16123 IR04_RS16400 IR04_RS16405 PF01464 Transglycosylase SLT domain IR04_RS16405 PF01476 LysM domain IR04_RS16410 PF03372 Endonuclease/Exonuclease/phosphatase family IR04_RS16415 PF00543 Nitrogen regulatory protein P-II IR04_RS16420 PF05870 Phenolic acid decarboxylase (PAD) IR04_RS16425 PF00034 Cytochrome c IR04_RS16430 PF01171 PP-loop family IR04_RS16430 PF09179 TilS substrate binding domain IR04_RS16430 PF11734 TilS substrate C-terminal domain IR04_RS16435 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IR04_RS16440 PF01336 OB-fold nucleic acid binding domain IR04_RS16440 PF02811 PHP domain IR04_RS16440 PF07733 Bacterial DNA polymerase III alpha subunit IR04_RS16440 PF14579 Helix-hairpin-helix motif IR04_RS16445 PF01351 Ribonuclease HII IR04_RS16450 PF02684 IR04_RS16450 IR04_RS16455 PF00132 Bacterial transferase hexapeptide (six repeats) IR04_RS16455 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IR04_RS16460 PF07977 FabA-like domain IR04_RS16465 PF00132 Bacterial transferase hexapeptide (six repeats) IR04_RS16465 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IR04_RS16465 PF14602 Hexapeptide repeat of succinyl-transferase IR04_RS16470 PF03938 Outer membrane protein (OmpH-like) IR04_RS16475 PF01103 Surface antigen IR04_RS16475 PF07244 Surface antigen variable number repeat IR04_RS16480 PF00595 PDZ domain (Also known as DHR or GLGF) IR04_RS16480 PF02163 Peptidase family M50 IR04_RS16485 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IR04_RS16485 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal IR04_RS16485 PF13288 DXP reductoisomerase C-terminal domain IR04_RS16490 PF01148 Cytidylyltransferase family IR04_RS16495 PF01255 Putative undecaprenyl diphosphate synthase IR04_RS16500 PF01765 Ribosome recycling factor IR04_RS16505 PF00696 Amino acid kinase family IR04_RS16510 PF00889 Elongation factor TS IR04_RS16515 PF00318 Ribosomal protein S2 IR04_RS16520 PF00557 Metallopeptidase family M24 IR04_RS16525 PF01909 Nucleotidyltransferase domain IR04_RS16525 PF01966 HD domain IR04_RS16525 PF08335 GlnD PII-uridylyltransferase IR04_RS16530 PF11944 IR04_RS16530 IR04_RS16535 PF04608 Phosphatidylglycerophosphatase A IR04_RS16540 PF00586 AIR synthase related protein, N-terminal domain IR04_RS16540 PF02769 AIR synthase related protein, C-terminal domain IR04_RS16545 PF01029 NusB family IR04_RS16550 PF00885 6,7-dimethyl-8-ribityllumazine synthase IR04_RS16555 PF00925 GTP cyclohydrolase II IR04_RS16555 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IR04_RS16560 PF00677 Lumazine binding domain IR04_RS16565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IR04_RS16565 PF01872 RibD C-terminal domain IR04_RS16570 PF03477 ATP cone domain IR04_RS16575 PF00171 Aldehyde dehydrogenase family IR04_RS16580 PF00696 Amino acid kinase family IR04_RS16580 PF01472 PUA domain IR04_RS16585 PF07417 Transcriptional regulator Crl IR04_RS16590 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) IR04_RS16595 PF00156 Phosphoribosyl transferase domain IR04_RS16600 PF00860 Permease family IR04_RS16605 PF01546 Peptidase family M20/M25/M40 IR04_RS16605 PF07687 Peptidase dimerisation domain IR04_RS16610 PF05618 Putative ATP-dependant zinc protease IR04_RS16615 PF08443 RimK-like ATP-grasp domain IR04_RS16620 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IR04_RS16625 PF00209 Sodium:neurotransmitter symporter family IR04_RS16630 PF00990 GGDEF domain IR04_RS16635 PF00872 IR04_RS16635 IR04_RS16640 PF05228 IR04_RS16640 IR04_RS16650 PF11101 IR04_RS16650 IR04_RS16655 PF00817 impB/mucB/samB family IR04_RS16655 PF11798 IMS family HHH motif IR04_RS16660 PF04400 IR04_RS16660 IR04_RS16665 PF02424 ApbE family IR04_RS16670 PF00111 2Fe-2S iron-sulfur cluster binding domain IR04_RS16670 PF00175 Oxidoreductase NAD-binding domain IR04_RS16670 PF00970 Oxidoreductase FAD-binding domain IR04_RS16675 PF02508 IR04_RS16675 IR04_RS16680 PF02508 IR04_RS16680 IR04_RS16685 PF04205 FMN-binding domain IR04_RS16690 PF03116 IR04_RS16690 IR04_RS16695 PF05896 IR04_RS16695 IR04_RS16695 PF11973 IR04_RS16695 IR04_RS16700 PF01722 BolA-like protein IR04_RS16705 PF05175 Methyltransferase small domain IR04_RS16710 PF03923 IR04_RS16710 IR04_RS16715 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IR04_RS16720 PF07690 Major Facilitator Superfamily IR04_RS16725 PF12973 ChrR Cupin-like domain IR04_RS16725 PF13490 Putative zinc-finger IR04_RS16730 PF04542 Sigma-70 region 2 IR04_RS16730 PF04545 Sigma-70, region 4 IR04_RS16735 PF02190 ATP-dependent protease La (LON) domain IR04_RS16740 PF03502 Nucleoside-specific channel-forming protein, Tsx IR04_RS16745 PF02558 Ketopantoate reductase PanE/ApbA IR04_RS16745 PF08546 Ketopantoate reductase PanE/ApbA C terminal IR04_RS16750 PF01965 DJ-1/PfpI family IR04_RS16755 PF00266 Aminotransferase class-V IR04_RS16760 PF02657 Fe-S metabolism associated domain IR04_RS16765 PF00899 ThiF family IR04_RS16770 PF03562 MltA specific insert domain IR04_RS16770 PF06725 3D domain IR04_RS16775 PF11012 IR04_RS16775 IR04_RS16780 PF00696 Amino acid kinase family IR04_RS16795 PF13538 UvrD-like helicase C-terminal domain IR04_RS16795 PF13604 AAA domain IR04_RS16800 PF00580 UvrD/REP helicase N-terminal domain IR04_RS16800 PF12705 PD-(D/E)XK nuclease superfamily IR04_RS16800 PF13361 UvrD-like helicase C-terminal domain IR04_RS16805 PF04257 Exodeoxyribonuclease V, gamma subunit IR04_RS16810 PF03595 Voltage-dependent anion channel IR04_RS16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS16815 PF03466 LysR substrate binding domain IR04_RS16820 PF07130 YebG protein IR04_RS16825 PF14602 Hexapeptide repeat of succinyl-transferase IR04_RS16825 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle IR04_RS16825 PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal IR04_RS16830 PF05940 IR04_RS16830 IR04_RS16835 PF11814 IR04_RS16835 IR04_RS16835 PF13673 Acetyltransferase (GNAT) domain IR04_RS16840 PF08443 RimK-like ATP-grasp domain IR04_RS16840 PF14401 IR04_RS16840 IR04_RS16845 PF01544 CorA-like Mg2+ transporter protein IR04_RS16850 PF06094 AIG2-like family IR04_RS16855 PF01588 Putative tRNA binding domain IR04_RS16860 PF00356 Bacterial regulatory proteins, lacI family IR04_RS16860 PF13377 Periplasmic binding protein-like domain IR04_RS16865 PF00703 Glycosyl hydrolases family 2 IR04_RS16865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IR04_RS16865 PF02837 Glycosyl hydrolases family 2, sugar binding domain IR04_RS16865 PF02929 Beta galactosidase small chain IR04_RS16865 PF16353 IR04_RS16865 IR04_RS16870 PF02417 IR04_RS16870 IR04_RS16875 PF13487 HD domain IR04_RS16880 PF00501 AMP-binding enzyme IR04_RS16885 PF00009 Elongation factor Tu GTP binding domain IR04_RS16885 PF00679 Elongation factor G C-terminus IR04_RS16885 PF03144 Elongation factor Tu domain 2 IR04_RS16885 PF03764 Elongation factor G, domain IV IR04_RS16885 PF14492 Elongation Factor G, domain II IR04_RS16890 PF13481 AAA domain IR04_RS16890 PF13541 Subunit ChlI of Mg-chelatase IR04_RS16895 PF07238 PilZ domain IR04_RS16900 PF00702 haloacid dehalogenase-like hydrolase IR04_RS16905 PF10144 IR04_RS16905 IR04_RS16910 PF01048 Phosphorylase superfamily IR04_RS16915 PF01676 Metalloenzyme superfamily IR04_RS16920 PF00591 Glycosyl transferase family, a/b domain IR04_RS16920 PF02885 Glycosyl transferase family, helical bundle domain IR04_RS16920 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IR04_RS16925 PF01791 DeoC/LacD family aldolase IR04_RS16935 PF01773 Na+ dependent nucleoside transporter N-terminus IR04_RS16935 PF07662 Na+ dependent nucleoside transporter C-terminus IR04_RS16935 PF07670 Nucleoside recognition IR04_RS16940 PF01026 TatD related DNase IR04_RS16945 PF03883 IR04_RS16945 IR04_RS16950 PF01235 IR04_RS16950 IR04_RS16955 PF12065 IR04_RS16955 IR04_RS16960 PF01814 Hemerythrin HHE cation binding domain IR04_RS16965 PF03167 Uracil DNA glycosylase superfamily IR04_RS16970 PF01261 Xylose isomerase-like TIM barrel IR04_RS16975 PF01228 Glycine radical IR04_RS16980 PF00291 Pyridoxal-phosphate dependent enzyme IR04_RS16980 PF14821 Threonine synthase N terminus IR04_RS16985 PF00288 GHMP kinases N terminal domain IR04_RS16985 PF08544 GHMP kinases C terminal IR04_RS16990 PF00696 Amino acid kinase family IR04_RS16990 PF00742 Homoserine dehydrogenase IR04_RS16990 PF01842 ACT domain IR04_RS16990 PF03447 Homoserine dehydrogenase, NAD binding domain IR04_RS16990 PF13840 ACT domain IR04_RS17000 PF03737 Demethylmenaquinone methyltransferase IR04_RS17005 PF11697 IR04_RS17005 IR04_RS17010 PF00072 Response regulator receiver domain IR04_RS17010 PF00486 Transcriptional regulatory protein, C terminal IR04_RS17015 PF00072 Response regulator receiver domain IR04_RS17015 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS17015 PF00989 PAS fold IR04_RS17015 PF01627 Hpt domain IR04_RS17015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS17020 PF00990 GGDEF domain IR04_RS17020 PF08448 PAS fold IR04_RS17020 PF13188 PAS domain IR04_RS17025 PF04055 Radical SAM superfamily IR04_RS17025 PF16199 IR04_RS17025 IR04_RS17030 PF00310 Glutamine amidotransferases class-II IR04_RS17030 PF01493 GXGXG motif IR04_RS17030 PF01645 Conserved region in glutamate synthase IR04_RS17030 PF04898 Glutamate synthase central domain IR04_RS17035 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR04_RS17035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IR04_RS17040 PF00310 Glutamine amidotransferases class-II IR04_RS17040 PF01493 GXGXG motif IR04_RS17040 PF01645 Conserved region in glutamate synthase IR04_RS17040 PF04898 Glutamate synthase central domain IR04_RS17045 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR04_RS17045 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IR04_RS17050 PF07386 IR04_RS17050 IR04_RS17055 PF01048 Phosphorylase superfamily IR04_RS17060 PF03186 IR04_RS17060 IR04_RS17065 PF01497 Periplasmic binding protein IR04_RS17070 PF03458 IR04_RS17070 IR04_RS17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS17075 PF03466 LysR substrate binding domain IR04_RS17080 PF01925 IR04_RS17080 IR04_RS17085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) IR04_RS17090 PF13304 AAA domain IR04_RS17110 PF02142 MGS-like domain IR04_RS17110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IR04_RS17110 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IR04_RS17115 PF00117 Glutamine amidotransferase class-I IR04_RS17115 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IR04_RS17125 PF01113 Dihydrodipicolinate reductase, N-terminus IR04_RS17125 PF05173 Dihydrodipicolinate reductase, C-terminus IR04_RS17130 PF00293 NUDIX domain IR04_RS17140 PF01043 SecA preprotein cross-linking domain IR04_RS17140 PF02810 SEC-C motif IR04_RS17140 PF07516 SecA Wing and Scaffold domain IR04_RS17140 PF07517 SecA DEAD-like domain IR04_RS17145 PF05258 IR04_RS17145 IR04_RS17150 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IR04_RS17155 PF00091 Tubulin/FtsZ family, GTPase domain IR04_RS17155 PF12327 FtsZ family, C-terminal domain IR04_RS17160 PF02491 SHS2 domain inserted in FTSA IR04_RS17160 PF14450 Cell division protein FtsA IR04_RS17165 PF03799 Cell division protein FtsQ IR04_RS17165 PF08478 POTRA domain, FtsQ-type IR04_RS17170 PF01225 Mur ligase family, catalytic domain IR04_RS17170 PF02875 Mur ligase family, glutamate ligase domain IR04_RS17170 PF08245 Mur ligase middle domain IR04_RS17175 PF03033 Glycosyltransferase family 28 N-terminal domain IR04_RS17175 PF04101 Glycosyltransferase family 28 C-terminal domain IR04_RS17180 PF01098 IR04_RS17180 IR04_RS17185 PF02875 Mur ligase family, glutamate ligase domain IR04_RS17185 PF08245 Mur ligase middle domain IR04_RS17190 PF00953 Glycosyl transferase family 4 IR04_RS17190 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IR04_RS17195 PF01225 Mur ligase family, catalytic domain IR04_RS17195 PF02875 Mur ligase family, glutamate ligase domain IR04_RS17195 PF08245 Mur ligase middle domain IR04_RS17200 PF01225 Mur ligase family, catalytic domain IR04_RS17200 PF02875 Mur ligase family, glutamate ligase domain IR04_RS17200 PF08245 Mur ligase middle domain IR04_RS17205 PF00905 Penicillin binding protein transpeptidase domain IR04_RS17205 PF03717 Penicillin-binding Protein dimerisation domain IR04_RS17210 PF04999 IR04_RS17210 IR04_RS17215 PF01795 MraW methylase family IR04_RS17220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IR04_RS17220 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR04_RS17225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IR04_RS17225 PF00364 Biotin-requiring enzyme IR04_RS17225 PF02817 e3 binding domain IR04_RS17230 PF00456 Transketolase, thiamine diphosphate binding domain IR04_RS17235 PF00392 Bacterial regulatory proteins, gntR family IR04_RS17235 PF07729 FCD domain IR04_RS17240 PF00149 Calcineurin-like phosphoesterase IR04_RS17240 PF02872 5'-nucleotidase, C-terminal domain IR04_RS17245 PF01368 DHH family IR04_RS17245 PF02272 DHHA1 domain IR04_RS17250 PF10411 Disulfide bond isomerase protein N-terminus IR04_RS17250 PF13098 Thioredoxin-like domain IR04_RS17255 PF00589 Phage integrase family IR04_RS17255 PF02899 Phage integrase, N-terminal SAM-like domain IR04_RS17260 PF00258 Flavodoxin IR04_RS17265 PF01510 N-acetylmuramoyl-L-alanine amidase IR04_RS17270 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IR04_RS17270 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IR04_RS17275 PF00114 Pilin (bacterial filament) IR04_RS17275 PF13633 Prokaryotic N-terminal methylation site IR04_RS17280 PF00437 Type II/IV secretion system protein IR04_RS17280 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IR04_RS17285 PF00482 Type II secretion system (T2SS), protein F IR04_RS17290 PF01478 Type IV leader peptidase family IR04_RS17290 PF06750 IR04_RS17290 IR04_RS17295 PF01121 Dephospho-CoA kinase IR04_RS17300 PF07072 Protein of unknown function (DUF1342) IR04_RS17305 PF03884 Domain of unknown function (DUF329) IR04_RS17310 PF00521 DNA gyrase/topoisomerase IV, subunit A IR04_RS17310 PF03989 DNA gyrase C-terminal domain, beta-propeller IR04_RS17315 PF00204 DNA gyrase B IR04_RS17315 PF00986 DNA gyrase B subunit, carboxyl terminus IR04_RS17315 PF01751 Toprim domain IR04_RS17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS17320 PF05728 Uncharacterised protein family (UPF0227) IR04_RS17325 PF00149 Calcineurin-like phosphoesterase IR04_RS17330 PF06853 IR04_RS17330 IR04_RS17335 PF00293 NUDIX domain IR04_RS17340 PF02321 Outer membrane efflux protein IR04_RS17345 PF00294 pfkB family carbohydrate kinase IR04_RS17345 PF01467 Cytidylyltransferase IR04_RS17350 PF03710 Glutamate-ammonia ligase adenylyltransferase IR04_RS17350 PF08335 GlnD PII-uridylyltransferase IR04_RS17355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IR04_RS17355 PF00672 HAMP domain IR04_RS17360 PF01928 CYTH domain IR04_RS17360 PF05235 CHAD domain IR04_RS17365 PF01865 Protein of unknown function DUF47 IR04_RS17370 PF01384 IR04_RS17370 IR04_RS17375 PF08239 Bacterial SH3 domain IR04_RS17380 PF16537 IR04_RS17380 IR04_RS17385 PF01471 Putative peptidoglycan binding domain IR04_RS17385 PF13401 AAA domain IR04_RS17390 PF01743 Poly A polymerase head domain IR04_RS17390 PF01966 HD domain IR04_RS17390 PF12627 Probable RNA and SrmB- binding site of polymerase A IR04_RS17395 PF00113 Enolase, C-terminal TIM barrel domain IR04_RS17395 PF03952 Enolase, N-terminal domain IR04_RS17400 PF00117 Glutamine amidotransferase class-I IR04_RS17400 PF06418 CTP synthase N-terminus IR04_RS17405 PF03819 MazG nucleotide pyrophosphohydrolase domain IR04_RS17410 PF02824 TGS domain IR04_RS17410 PF04607 Region found in RelA / SpoT proteins IR04_RS17410 PF13291 ACT domain IR04_RS17410 PF13328 HD domain IR04_RS17415 PF01938 TRAM domain IR04_RS17415 PF05958 tRNA (Uracil-5-)-methyltransferase IR04_RS17420 PF00072 Response regulator receiver domain IR04_RS17420 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS17420 PF00672 HAMP domain IR04_RS17420 PF01627 Hpt domain IR04_RS17420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS17420 PF09984 IR04_RS17420 IR04_RS17425 PF00672 HAMP domain IR04_RS17425 PF00990 GGDEF domain IR04_RS17440 PF01648 4'-phosphopantetheinyl transferase superfamily IR04_RS17445 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IR04_RS17450 PF02565 Recombination protein O C terminal IR04_RS17450 PF11967 Recombination protein O N terminal IR04_RS17455 PF01926 50S ribosome-binding GTPase IR04_RS17455 PF07650 KH domain IR04_RS17460 PF00035 Double-stranded RNA binding motif IR04_RS17460 PF14622 Ribonuclease-III-like IR04_RS17465 PF00717 Peptidase S24-like IR04_RS17465 PF10502 Signal peptidase, peptidase S26 IR04_RS17470 PF00009 Elongation factor Tu GTP binding domain IR04_RS17470 PF00679 Elongation factor G C-terminus IR04_RS17470 PF03144 Elongation factor Tu domain 2 IR04_RS17470 PF06421 GTP-binding protein LepA C-terminus IR04_RS17475 PF04246 IR04_RS17475 IR04_RS17480 PF03888 MucB/RseB family IR04_RS17480 PF17188 IR04_RS17480 IR04_RS17485 PF03872 Anti sigma-E protein RseA, N-terminal domain IR04_RS17485 PF03873 Anti sigma-E protein RseA, C-terminal domain IR04_RS17490 PF04542 Sigma-70 region 2 IR04_RS17490 PF08281 Sigma-70, region 4 IR04_RS17500 PF00890 FAD binding domain IR04_RS17500 PF02910 Fumarate reductase flavoprotein C-term IR04_RS17510 PF03937 Flavinator of succinate dehydrogenase IR04_RS17515 PF01571 Aminomethyltransferase folate-binding domain IR04_RS17520 PF06526 Protein of unknown function (DUF1107) IR04_RS17525 PF01494 FAD binding domain IR04_RS17530 PF01494 FAD binding domain IR04_RS17535 PF03695 Uncharacterised protein family (UPF0149) IR04_RS17540 PF05164 Cell division protein ZapA IR04_RS17550 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IR04_RS17555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IR04_RS17555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IR04_RS17560 PF10369 Small subunit of acetolactate synthase IR04_RS17560 PF13710 ACT domain IR04_RS17565 PF00205 Thiamine pyrophosphate enzyme, central domain IR04_RS17565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IR04_RS17565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IR04_RS17570 PF00501 AMP-binding enzyme IR04_RS17575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS17575 PF03466 LysR substrate binding domain IR04_RS17580 PF13528 Glycosyl transferase family 1 IR04_RS17585 PF01569 PAP2 superfamily IR04_RS17590 PF00440 Bacterial regulatory proteins, tetR family IR04_RS17590 PF14514 Transcriptional regulator, TetR, C-terminal IR04_RS17595 PF00682 HMGL-like IR04_RS17595 PF08502 LeuA allosteric (dimerisation) domain IR04_RS17600 PF00180 Isocitrate/isopropylmalate dehydrogenase IR04_RS17605 PF00330 Aconitase family (aconitate hydratase) IR04_RS17610 PF00694 Aconitase C-terminal domain IR04_RS17615 PF04784 IR04_RS17615 IR04_RS17655 PF01966 HD domain IR04_RS17655 PF11871 IR04_RS17655 IR04_RS17665 PF06271 IR04_RS17665 IR04_RS17670 PF03739 IR04_RS17670 IR04_RS17675 PF03739 IR04_RS17675 IR04_RS17680 PF00883 Cytosol aminopeptidase family, catalytic domain IR04_RS17680 PF02789 Cytosol aminopeptidase family, N-terminal domain IR04_RS17685 PF04364 DNA polymerase III chi subunit, HolC IR04_RS17690 PF00133 tRNA synthetases class I (I, L, M and V) IR04_RS17690 PF08264 Anticodon-binding domain of tRNA IR04_RS17690 PF10458 Valyl tRNA synthetase tRNA binding arm IR04_RS17695 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IR04_RS17695 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IR04_RS17700 PF00849 RNA pseudouridylate synthase IR04_RS17705 PF00176 SNF2 family N-terminal domain IR04_RS17705 PF00271 Helicase conserved C-terminal domain IR04_RS17705 PF12137 RNA polymerase recycling family C-terminal IR04_RS17715 PF02562 PhoH-like protein IR04_RS17715 PF13638 PIN domain IR04_RS17720 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IR04_RS17720 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IR04_RS17730 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IR04_RS17730 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IR04_RS17735 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IR04_RS17735 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IR04_RS17740 PF01042 Endoribonuclease L-PSP IR04_RS17745 PF01553 Acyltransferase IR04_RS17750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IR04_RS17755 PF01722 BolA-like protein IR04_RS17760 PF13466 STAS domain IR04_RS17765 PF05494 Toluene tolerance, Ttg2 IR04_RS17770 PF02470 IR04_RS17770 IR04_RS17775 PF02405 IR04_RS17775 IR04_RS17780 PF00005 ABC transporter IR04_RS17790 PF01699 Sodium/calcium exchanger protein IR04_RS17795 PF00571 CBS domain IR04_RS17795 PF01380 SIS domain IR04_RS17800 PF08282 haloacid dehalogenase-like hydrolase IR04_RS17805 PF06835 Lipopolysaccharide-assembly, LptC-related IR04_RS17810 PF03968 OstA-like protein IR04_RS17815 PF00005 ABC transporter IR04_RS17815 PF12399 Branched-chain amino acid ATP-binding cassette transporter IR04_RS17820 PF00309 IR04_RS17820 IR04_RS17820 PF04552 Sigma-54, DNA binding domain IR04_RS17820 PF04963 Sigma-54 factor, core binding domain IR04_RS17825 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IR04_RS17830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IR04_RS17835 PF03668 IR04_RS17835 IR04_RS17840 PF00381 PTS HPr component phosphorylation site IR04_RS17845 PF00571 CBS domain IR04_RS17845 PF01769 Divalent cation transporter IR04_RS17845 PF03448 MgtE intracellular N domain IR04_RS17850 PF01523 Putative modulator of DNA gyrase IR04_RS17855 PF04751 Protein of unknown function (DUF615) IR04_RS17860 PF00005 ABC transporter IR04_RS17865 PF00528 Binding-protein-dependent transport system inner membrane component IR04_RS17870 PF13343 Bacterial extracellular solute-binding protein IR04_RS17875 PF02441 Flavoprotein IR04_RS17880 PF01225 Mur ligase family, catalytic domain IR04_RS17880 PF02875 Mur ligase family, glutamate ligase domain IR04_RS17880 PF08245 Mur ligase middle domain IR04_RS17890 PF00316 Fructose-1-6-bisphosphatase IR04_RS17895 PF00719 Inorganic pyrophosphatase IR04_RS17900 PF06094 AIG2-like family IR04_RS17905 PF04357 IR04_RS17905 IR04_RS17910 PF01103 Surface antigen IR04_RS17915 PF01625 Peptide methionine sulfoxide reductase IR04_RS17920 PF09695 IR04_RS17920 IR04_RS17925 PF10795 IR04_RS17925 IR04_RS17930 PF10986 IR04_RS17930 IR04_RS17935 PF00005 ABC transporter IR04_RS17940 PF02687 IR04_RS17940 IR04_RS17940 PF12704 MacB-like periplasmic core domain IR04_RS17945 PF11736 Protein of unknown function (DUF3299) IR04_RS17950 PF10987 IR04_RS17950 IR04_RS17955 PF01583 Adenylylsulphate kinase IR04_RS17960 PF00009 Elongation factor Tu GTP binding domain IR04_RS17965 PF01507 Phosphoadenosine phosphosulfate reductase family IR04_RS17970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IR04_RS17975 PF00149 Calcineurin-like phosphoesterase IR04_RS17975 PF02872 5'-nucleotidase, C-terminal domain IR04_RS17985 PF00270 DEAD/DEAH box helicase IR04_RS17985 PF00271 Helicase conserved C-terminal domain IR04_RS17985 PF03880 DbpA RNA binding domain IR04_RS17990 PF13673 Acetyltransferase (GNAT) domain IR04_RS17995 PF00892 EamA-like transporter family IR04_RS18005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR04_RS18005 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IR04_RS18010 PF11075 IR04_RS18010 IR04_RS18015 PF01196 Ribosomal protein L17 IR04_RS18020 PF01000 RNA polymerase Rpb3/RpoA insert domain IR04_RS18020 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IR04_RS18020 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IR04_RS18025 PF00163 Ribosomal protein S4/S9 N-terminal domain IR04_RS18025 PF01479 S4 domain IR04_RS18030 PF00411 Ribosomal protein S11 IR04_RS18035 PF00416 Ribosomal protein S13/S18 IR04_RS18040 PF00444 Ribosomal protein L36 IR04_RS18045 PF00344 SecY translocase IR04_RS18050 PF00828 Ribosomal protein L18e/L15 IR04_RS18055 PF00327 Ribosomal protein L30p/L7e IR04_RS18060 PF00333 Ribosomal protein S5, N-terminal domain IR04_RS18060 PF03719 Ribosomal protein S5, C-terminal domain IR04_RS18065 PF00861 Ribosomal L18p/L5e family IR04_RS18070 PF00347 Ribosomal protein L6 IR04_RS18075 PF00410 Ribosomal protein S8 IR04_RS18080 PF00253 Ribosomal protein S14p/S29e IR04_RS18085 PF00281 Ribosomal protein L5 IR04_RS18085 PF00673 ribosomal L5P family C-terminus IR04_RS18090 PF00467 KOW motif IR04_RS18090 PF17136 IR04_RS18090 IR04_RS18095 PF00238 Ribosomal protein L14p/L23e IR04_RS18100 PF00366 Ribosomal protein S17 IR04_RS18105 PF00831 Ribosomal L29 protein IR04_RS18110 PF00252 Ribosomal protein L16p/L10e IR04_RS18115 PF00189 Ribosomal protein S3, C-terminal domain IR04_RS18115 PF07650 KH domain IR04_RS18120 PF00237 Ribosomal protein L22p/L17e IR04_RS18125 PF00203 Ribosomal protein S19 IR04_RS18130 PF00181 Ribosomal Proteins L2, RNA binding domain IR04_RS18130 PF03947 Ribosomal Proteins L2, C-terminal domain IR04_RS18135 PF00276 Ribosomal protein L23 IR04_RS18140 PF00573 Ribosomal protein L4/L1 family IR04_RS18145 PF00297 Ribosomal protein L3 IR04_RS18150 PF00338 Ribosomal protein S10p/S20e IR04_RS18160 PF00575 S1 RNA binding domain IR04_RS18160 PF00773 RNB domain IR04_RS18160 PF08206 Ribonuclease B OB domain IR04_RS18160 PF08461 Ribonuclease R winged-helix domain IR04_RS18165 PF00884 Sulfatase IR04_RS18165 PF11893 IR04_RS18165 IR04_RS18170 PF08238 Sel1 repeat IR04_RS18175 PF00709 Adenylosuccinate synthetase IR04_RS18180 PF01112 Asparaginase IR04_RS18185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IR04_RS18190 PF09526 IR04_RS18190 IR04_RS18195 PF00999 Sodium/hydrogen exchanger family IR04_RS18195 PF02254 TrkA-N domain IR04_RS18200 PF02525 Flavodoxin-like fold IR04_RS18205 PF00005 ABC transporter IR04_RS18205 PF09496 Cenp-O kinetochore centromere component IR04_RS18205 PF12848 ABC transporter IR04_RS18210 PF09523 IR04_RS18210 IR04_RS18215 PF00561 alpha/beta hydrolase fold IR04_RS18220 PF06794 Uncharacterised protein family (UPF0270) IR04_RS18225 PF00485 Phosphoribulokinase / Uridine kinase family IR04_RS18230 PF00027 Cyclic nucleotide-binding domain IR04_RS18230 PF00325 Bacterial regulatory proteins, crp family IR04_RS18235 PF07063 Domain of unknown function (DUF1338) IR04_RS18245 PF04958 Arginine N-succinyltransferase beta subunit IR04_RS18250 PF00202 Aminotransferase class-III IR04_RS18255 PF00117 Glutamine amidotransferase class-I IR04_RS18260 PF00919 Uncharacterized protein family UPF0004 IR04_RS18260 PF04055 Radical SAM superfamily IR04_RS18265 PF00932 Lamin Tail Domain IR04_RS18270 PF00497 Bacterial extracellular solute-binding proteins, family 3 IR04_RS18275 PF00579 tRNA synthetases class I (W and Y) IR04_RS18280 PF13419 Haloacid dehalogenase-like hydrolase IR04_RS18285 PF00834 Ribulose-phosphate 3 epimerase family IR04_RS18290 PF02086 D12 class N6 adenine-specific DNA methyltransferase IR04_RS18295 PF05036 Sporulation related domain IR04_RS18295 PF13401 AAA domain IR04_RS18300 PF01761 3-dehydroquinate synthase IR04_RS18305 PF01202 Shikimate kinase IR04_RS18310 PF00263 IR04_RS18310 IR04_RS18310 PF03958 Bacterial type II/III secretion system short domain IR04_RS18315 PF04351 Pilus assembly protein, PilP IR04_RS18320 PF04350 Pilus assembly protein, PilO IR04_RS18325 PF05137 IR04_RS18325 IR04_RS18330 PF11104 Type IV pilus assembly protein PilM; IR04_RS18335 PF00905 Penicillin binding protein transpeptidase domain IR04_RS18335 PF00912 Transglycosylase IR04_RS18335 PF17092 IR04_RS18335 IR04_RS18340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS18340 PF03466 LysR substrate binding domain IR04_RS18345 PF00462 Glutaredoxin IR04_RS18345 PF08534 Redoxin IR04_RS18350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IR04_RS18350 PF07992 Pyridine nucleotide-disulphide oxidoreductase IR04_RS18355 PF12292 IR04_RS18355 IR04_RS18360 PF00206 Lyase IR04_RS18360 PF14698 Argininosuccinate lyase C-terminal IR04_RS18365 PF00764 Arginosuccinate synthase IR04_RS18370 PF00696 Amino acid kinase family IR04_RS18375 PF01118 Semialdehyde dehydrogenase, NAD binding domain IR04_RS18375 PF02774 Semialdehyde dehydrogenase, dimerisation domain IR04_RS18380 PF01546 Peptidase family M20/M25/M40 IR04_RS18380 PF07687 Peptidase dimerisation domain IR04_RS18385 PF00311 Phosphoenolpyruvate carboxylase IR04_RS18390 PF03551 Transcriptional regulator PadR-like family IR04_RS18390 PF10400 Virulence activator alpha C-term IR04_RS18395 PF00132 Bacterial transferase hexapeptide (six repeats) IR04_RS18395 PF06426 Serine acetyltransferase, N-terminal IR04_RS18400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IR04_RS18400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IR04_RS18405 PF02556 Preprotein translocase subunit SecB IR04_RS18410 PF00581 Rhodanese-like domain IR04_RS18415 PF00152 tRNA synthetases class II (D, K and N) IR04_RS18420 PF00890 FAD binding domain IR04_RS18420 PF02910 Fumarate reductase flavoprotein C-term IR04_RS18425 PF13085 2Fe-2S iron-sulfur cluster binding domain IR04_RS18425 PF13183 4Fe-4S dicluster domain IR04_RS18430 PF02300 Fumarate reductase subunit C IR04_RS18435 PF02313 Fumarate reductase subunit D IR04_RS18440 PF01132 Elongation factor P (EF-P) OB domain IR04_RS18440 PF08207 Elongation factor P (EF-P) KOW-like domain IR04_RS18440 PF09285 Elongation factor P, C-terminal IR04_RS18445 PF04055 Radical SAM superfamily IR04_RS18445 PF13353 4Fe-4S single cluster domain IR04_RS18455 PF00118 TCP-1/cpn60 chaperonin family IR04_RS18460 PF00166 Chaperonin 10 Kd subunit IR04_RS18465 PF13412 Winged helix-turn-helix DNA-binding IR04_RS18470 PF11333 IR04_RS18470 IR04_RS18475 PF05656 IR04_RS18475 IR04_RS18480 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase IR04_RS18485 PF00121 Triosephosphate isomerase IR04_RS18490 PF01554 MatE IR04_RS18495 PF03737 Demethylmenaquinone methyltransferase IR04_RS18500 PF01040 UbiA prenyltransferase family IR04_RS18505 PF00004 ATPase family associated with various cellular activities (AAA) IR04_RS18505 PF07724 AAA domain (Cdc48 subfamily) IR04_RS18505 PF10431 C-terminal, D2-small domain, of ClpB protein IR04_RS18510 PF00227 Proteasome subunit IR04_RS18515 PF05036 Sporulation related domain IR04_RS18520 PF00356 Bacterial regulatory proteins, lacI family IR04_RS18520 PF13377 Periplasmic binding protein-like domain IR04_RS18525 PF00270 DEAD/DEAH box helicase IR04_RS18525 PF00271 Helicase conserved C-terminal domain IR04_RS18530 PF01197 Ribosomal protein L31 IR04_RS18535 PF00390 Malic enzyme, N-terminal domain IR04_RS18535 PF03949 Malic enzyme, NAD binding domain IR04_RS18540 PF01340 Met Apo-repressor, MetJ IR04_RS18545 PF01053 Cys/Met metabolism PLP-dependent enzyme IR04_RS18550 PF00696 Amino acid kinase family IR04_RS18550 PF00742 Homoserine dehydrogenase IR04_RS18550 PF03447 Homoserine dehydrogenase, NAD binding domain IR04_RS18555 PF02219 Methylenetetrahydrofolate reductase IR04_RS18560 PF06005 Protein of unknown function (DUF904) IR04_RS18565 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IR04_RS18570 PF00365 Phosphofructokinase IR04_RS18575 PF01545 Cation efflux family IR04_RS18575 PF16916 IR04_RS18575 IR04_RS18580 PF07813 LTXXQ motif family protein IR04_RS18585 PF00072 Response regulator receiver domain IR04_RS18585 PF00486 Transcriptional regulatory protein, C terminal IR04_RS18590 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS18590 PF00672 HAMP domain IR04_RS18590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS18590 PF16527 IR04_RS18590 IR04_RS18595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IR04_RS18595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IR04_RS18600 PF00588 SpoU rRNA Methylase family IR04_RS18605 PF04186 IR04_RS18605 IR04_RS18610 PF00990 GGDEF domain IR04_RS18615 PF00206 Lyase IR04_RS18615 PF10415 Fumarase C C-terminus IR04_RS18620 PF03605 IR04_RS18620 IR04_RS18625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IR04_RS18625 PF03714 Bacterial pullanase-associated domain IR04_RS18630 PF11852 Domain of unknown function (DUF3372) IR04_RS18635 PF02683 IR04_RS18635 IR04_RS18635 PF11412 Disulphide bond corrector protein DsbC IR04_RS18635 PF13899 Thioredoxin-like IR04_RS18640 PF00072 Response regulator receiver domain IR04_RS18640 PF00196 Bacterial regulatory proteins, luxR family IR04_RS18645 PF00999 Sodium/hydrogen exchanger family IR04_RS18645 PF02080 TrkA-C domain IR04_RS18645 PF03471 Transporter associated domain IR04_RS18650 PF13937 IR04_RS18650 IR04_RS18655 PF00474 Sodium:solute symporter family IR04_RS18660 PF02592 IR04_RS18660 IR04_RS18665 PF00625 Guanylate kinase IR04_RS18670 PF01192 RNA polymerase Rpb6 IR04_RS18675 PF02824 TGS domain IR04_RS18675 PF04607 Region found in RelA / SpoT proteins IR04_RS18675 PF13291 ACT domain IR04_RS18675 PF13328 HD domain IR04_RS18680 PF00270 DEAD/DEAH box helicase IR04_RS18680 PF00271 Helicase conserved C-terminal domain IR04_RS18680 PF17191 IR04_RS18680 IR04_RS18685 PF00860 Permease family IR04_RS18695 PF00072 Response regulator receiver domain IR04_RS18695 PF00486 Transcriptional regulatory protein, C terminal IR04_RS18700 PF01272 Transcription elongation factor, GreA/GreB, C-term IR04_RS18700 PF03449 Transcription elongation factor, N-terminal IR04_RS18705 PF00575 S1 RNA binding domain IR04_RS18705 PF09371 Tex-like protein N-terminal domain IR04_RS18705 PF12836 Helix-hairpin-helix motif IR04_RS18705 PF16921 IR04_RS18705 IR04_RS18715 PF00561 alpha/beta hydrolase fold IR04_RS18720 PF00156 Phosphoribosyl transferase domain IR04_RS18725 PF01106 NifU-like domain IR04_RS18725 PF01521 Iron-sulphur cluster biosynthesis IR04_RS18730 PF00293 NUDIX domain IR04_RS18735 PF00459 Inositol monophosphatase family IR04_RS18740 PF01203 IR04_RS18740 IR04_RS18745 PF04612 Type II secretion system (T2SS), protein M IR04_RS18750 PF05134 Type II secretion system (T2SS), protein L IR04_RS18750 PF12693 GspL periplasmic domain IR04_RS18755 PF03934 Type II secretion system (T2SS), protein K IR04_RS18760 PF11612 Type II secretion system (T2SS), protein J IR04_RS18760 PF13633 Prokaryotic N-terminal methylation site IR04_RS18765 PF02501 Type II secretion system (T2SS), protein I IR04_RS18765 PF13633 Prokaryotic N-terminal methylation site IR04_RS18770 PF12019 Type II transport protein GspH IR04_RS18775 PF08334 Type II secretion system (T2SS), protein G IR04_RS18775 PF13544 IR04_RS18775 IR04_RS18780 PF00482 Type II secretion system (T2SS), protein F IR04_RS18785 PF00437 Type II/IV secretion system protein IR04_RS18790 PF00263 IR04_RS18790 IR04_RS18790 PF03958 Bacterial type II/III secretion system short domain IR04_RS18795 PF11356 Type IV pilus biogenesis IR04_RS18800 PF01479 S4 domain IR04_RS18805 PF01430 Hsp33 protein IR04_RS18810 PF01293 Phosphoenolpyruvate carboxykinase IR04_RS18815 PF05170 IR04_RS18815 IR04_RS18820 PF09500 Putative thioesterase (yiiD_Cterm) IR04_RS18820 PF13673 Acetyltransferase (GNAT) domain IR04_RS18825 PF02580 D-Tyr-tRNA(Tyr) deacylase IR04_RS18830 PF03631 IR04_RS18830 IR04_RS18835 PF13521 AAA domain IR04_RS18840 PF00009 Elongation factor Tu GTP binding domain IR04_RS18840 PF00679 Elongation factor G C-terminus IR04_RS18840 PF03144 Elongation factor Tu domain 2 IR04_RS18850 PF00120 Glutamine synthetase, catalytic domain IR04_RS18850 PF03951 Glutamine synthetase, beta-Grasp domain IR04_RS18855 PF13511 IR04_RS18855 IR04_RS18860 PF00512 His Kinase A (phospho-acceptor) domain IR04_RS18860 PF00989 PAS fold IR04_RS18860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IR04_RS18865 PF00072 Response regulator receiver domain IR04_RS18865 PF00158 Sigma-54 interaction domain IR04_RS18865 PF02954 Bacterial regulatory protein, Fis family IR04_RS18870 PF00563 EAL domain IR04_RS18870 PF00672 HAMP domain IR04_RS18870 PF00990 GGDEF domain IR04_RS18870 PF02743 Cache domain IR04_RS18875 PF00962 Adenosine/AMP deaminase IR04_RS18940 PF12724 Flavodoxin domain IR04_RS18945 PF02386 Cation transport protein IR04_RS18950 PF01205 Uncharacterized protein family UPF0029 IR04_RS18950 PF09186 Domain of unknown function (DUF1949) IR04_RS18955 PF00378 Enoyl-CoA hydratase/isomerase family IR04_RS18955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IR04_RS18955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IR04_RS18960 PF00108 Thiolase, N-terminal domain IR04_RS18960 PF02803 Thiolase, C-terminal domain IR04_RS18965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IR04_RS18965 PF03466 LysR substrate binding domain IR04_RS18970 PF07690 Major Facilitator Superfamily IR04_RS18975 PF00132 Bacterial transferase hexapeptide (six repeats) IR04_RS18975 PF12804 MobA-like NTP transferase domain IR04_RS18980 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IR04_RS18980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IR04_RS18985 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IR04_RS18985 PF02874 ATP synthase alpha/beta family, beta-barrel domain IR04_RS18990 PF00231 ATP synthase IR04_RS18995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IR04_RS18995 PF00306 ATP synthase alpha/beta chain, C terminal domain IR04_RS18995 PF02874 ATP synthase alpha/beta family, beta-barrel domain IR04_RS19000 PF00213 ATP synthase delta (OSCP) subunit IR04_RS19005 PF00430 ATP synthase B/B' CF(0) IR04_RS19010 PF00137 ATP synthase subunit C IR04_RS19015 PF00119 ATP synthase A chain IR04_RS19020 PF03899 IR04_RS19020 IR04_RS19025 PF02195 ParB-like nuclease domain IR04_RS19030 PF13614 AAA domain IR04_RS19035 PF02527 rRNA small subunit methyltransferase G IR04_RS19040 PF01134 Glucose inhibited division protein A IR04_RS19040 PF13932 GidA associated domain 3 IR04_RS19065 PF00353 Hemolysin-type calcium-binding repeat (2 copies)