locus_tag old_locus_tag gene Name start end strand product note type ID NCBI VC0001 VC0001 VC0001 235 402 - hypothetical protein gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=VC0001 VC0002 VC0002 VC0002 372 806 - flavodoxin 'An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group' gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=VC0002 VC0003 VC0003 trmE trmE 816 2210 - tRNA modification GTPase TrmE 'in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE' gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=VC0003 VC0004 VC0004 VC0004 2271 3896 - inner membrane protein translocase component YidC functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=VC0004 VC0005 VC0005 VC0005 3899 4156 - hypothetical protein gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=VC0005 VC0006 VC0006 rnpA rnpA 4123 4479 - ribonuclease P protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=VC0006 VC0007 VC0007 rpmH rpmH 4492 4629 - 50S ribosomal protein L34 in Escherichia coli transcription of this gene is enhanced by polyamines gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=VC0007 VC0008 VC0008 VC0008 4871 5608 - amino acid ABC transporter ATP-binding protein similar to SP:P54954 PID:1408500 GB:AL009126%3B identified by sequence similarity gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=VC0008 VC0009 VC0009 VC0009 5605 6276 - amino acid ABC transporter permease similar to PID:1006570 SP:P52625 PID:1006567%3B identified by sequence similarity gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=VC0009 VC0010 VC0010 VC0010 6354 7100 - amino acid ABC transporter substrate-binding protein similar to PID:1006570 SP:P52626 PID:1006568%3B identified by sequence similarity gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=VC0010 VC0012 VC0012 dnaA dnaA 7397 8815 + chromosome replication initiator DnaA binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself. gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=VC0012 VC0013 VC0013 VC0013 8873 9973 + DNA polymerase III subunit beta binds the polymerase to DNA and acts as a sliding clamp gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=VC0013 VC0014 VC0014 recF recF 9991 11082 + recombination protein F 'Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA' gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=VC0014 VC0015 VC0015 gyrB gyrB 11103 13520 + DNA gyrase subunit B negatively supercoils closed circular double-stranded DNA gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=VC0015 VC0015a VC0015a VC0015a 13876 14367 + hypothetical protein gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=VC0015a VC0017 VC0017 VC0017 14377 14493 + hypothetical protein gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=VC0017 VC0018 VC0018 VC0018 14769 15206 + 16 kDa heat shock protein A similar to GB:L10328 SP:P29209 GB:M94104 PID:147369 PID:290536%3B identified by sequence similarity gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=VC0018 VC0019 VC0019 avtA avtA 15294 16550 - valine--pyruvate transaminase 'transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis' gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=VC0019 VC0020 VC0020 glyS glyS 16869 18935 - glycyl-tRNA synthetase subunit beta glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=VC0020 VC0021 VC0021 glyQ glyQ 18950 19867 - glycyl-tRNA synthetase subunit alpha glycine--tRNA ligase alpha chain%3B GlyRS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=VC0021 VC0022 VC0022 VC0022 20235 20837 + hypothetical protein gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=VC0022 VC0023 VC0023 VC0023 20943 21200 + NADH dehydrogenase subunit II-like protein similar to GP:3603110%3B identified by sequence similarity gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=VC0023 VC0024 VC0024 VC0024 21287 21535 - sulfur transfer protein SirA TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=VC0024 VC0025 VC0025 VC0025 21656 21856 + hypothetical protein gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=VC0025 VC0026 VC0026 VC0026 22028 23008 - zinc-binding alcohol dehydrogenase similar to GB:M80458 SP:P26646 PID:145173 PID:606193 GB:U00096%3B identified by sequence similarity gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=VC0026 VC0027 VC0027 VC0027 23256 24788 - threonine dehydratase 'threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway' gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=VC0027 VC0028 VC0028 VC0028 24792 26633 - dihydroxy-acid dehydratase 'catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis' gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=VC0028 VC0029 VC0029 VC0029 26643 27602 - branched-chain amino acid aminotransferase catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=VC0029 VC0030 VC0030 ilvM ilvM 27593 27877 - acetolactate synthase 2 regulatory subunit similar to GB:M87049 SP:P13048 GB:X02413 GB:X04890 PID:146459%3B identified by sequence similarity gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=VC0030 VC0031 VC0031 VC0031 27889 29535 - acetolactate synthase 2 catalytic subunit catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=VC0031 VC0032 VC0032 VC0032 30069 31592 + ComM-like protein similar to GB:L42023 SP:P45049 PID:1006428 PID:1221236 PID:1205364%3B identified by sequence similarity gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=VC0032 VC0033 VC0033 VC0033 31682 32566 + acyltransferase gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=VC0033 VC0034 VC0034 VC0034 32644 33246 - thiol:disulfide interchange protein similar to GB:M93713 SP:P32557 GB:X64725 PID:155287 PID:48354%3B identified by sequence similarity gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=VC0034 VC0035 VC0035 VC0035 33277 34263 - serine/threonine protein kinase catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=VC0035 VC0036 VC0036 VC0036 34311 35735 - FixG-like protein similar to PID:2398782%3B identified by sequence similarity gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=VC0036 VC0037 VC0037 VC0037 36152 36430 - hypothetical protein gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=VC0037 VC0038 VC0038 VC0038 36527 36694 - hypothetical protein gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=VC0038 VC0039 VC0039 VC0039 36928 37770 + SpoOM-like protein similar to GP:3522984%3B identified by sequence similarity gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=VC0039 VC0040 VC0040 VC0040 37848 38495 + hemolysin similar to PID:887849 GB:U00096 PID:1789266%3B identified by sequence similarity gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=VC0040 VC0041 VC0041 VC0041 38534 39190 - hypothetical protein gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=VC0041 VC0042 VC0042 VC0042 39103 40548 - potassium uptake protein TrkH similar to GP:3288671%3B identified by sequence similarity gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=VC0042 VC0043 VC0043 trkA trkA 40560 41936 - potassium transporter peripheral membrane protein involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=VC0043 VC0044 VC0044 VC0044 41998 43302 - sun protein similar to SP:P36929 SP:P23866 GB:X52114 PID:43136 PID:443992%3B identified by sequence similarity gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=VC0044 VC0045 VC0045 fmt fmt 43334 44281 - methionyl-tRNA formyltransferase modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=VC0045 VC0046 VC0046 def def 44299 44808 - peptide deformylase cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+) gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=VC0046 VC0047 VC0047 VC0047 44900 46075 + hypothetical protein gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=VC0047 VC0048 VC0048 VC0048 46075 47190 + smf protein similar to GB:L42023 SP:P43862 PID:1006171 PID:1221098 PID:609332%3B identified by sequence similarity gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=VC0048 VC0049 VC0049 VC0049 47193 47669 + hypothetical protein similar to SP:P30853 PID:606218 GB:U00096 PID:1789679%3B identified by sequence similarity gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=VC0049 VC0050 VC0050 VC0050 47679 48251 + DNA topoisomerase I-like protein similar to SP:P45771 PID:606217 GB:U00096 PID:1789677%3B identified by sequence similarity gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=VC0050 VC0051 VC0051 VC0051 48324 49457 - phosphoribosylaminoimidazole carboxylase ATPase subunit With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=VC0051 VC0052 VC0052 VC0052 49461 49946 - phosphoribosylaminoimidazole carboxylase catalytic subunit Catalyzes a step in the de novo purine nucleotide biosynthetic pathway gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=VC0052 VC0054 VC0054 VC0054 50104 50670 + Sua5/YciO/YrdC family protein similar to SP:P45748 PID:606216 GB:U00096 PID:2367210%3B identified by sequence similarity gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=VC0054 VC0055 VC0055 VC0055 50689 51606 + coproporphyrinogen III oxidase catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=VC0055 VC0056 VC0056 aroE aroE 51668 52504 + shikimate 5-dehydrogenase AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=VC0056 VC0057 VC0057 VC0057 52501 52776 + hypothetical protein gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=VC0057 VC0058 VC0058 VC0058 52757 53311 - carbonic anhydrase similar to GB:AE000657%3B identified by sequence similarity gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=VC0058 VC0059 VC0059 VC0059 53497 53637 + hypothetical protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=VC0059 VC0060 VC0060 ccrB ccrB 59356 59736 + camphor resistance protein CrcB may be involved in chromosome condensation%3B overexpression in Escherichia coli protects against decondensation by camphor%3B overexpressing the protein results in an increase in supercoiling gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=VC0060 VC0061 VC0061 VC0061 59988 61925 + thiamine biosynthesis protein ThiC required for the synthesis of the hydromethylpyrimidine moiety of thiamine gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=VC0061 VC0062 VC0062 thiE thiE 61929 63251 + thiamine-phosphate pyrophosphorylase Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=VC0062 VC0063 VC0063 VC0063 63238 64014 + thiazole biosynthesis adenylyltransferase ThiF similar to SP:P30138 PID:396331 PID:414234 GB:U00096 PID:1790425%3B identified by sequence similarity gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=VC0063 VC0064 VC0064 VC0064 64014 64214 + sulfur carrier protein ThiS 'with ThiF%2C ThiG%2C and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate' gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=VC0064 VC0065 VC0065 thiG thiG 64220 64990 + thiazole synthase functions in thiamine (vitamin B1) biosynthesis%3B in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=VC0065 VC0066 VC0066 thiH thiH 64987 66099 + thiamine biosynthesis protein ThiH 'in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center' gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=VC0066 VC0067 VC0067 VC0067 66324 68117 - aminopeptidase similar to GP:2584787%3B identified by sequence similarity gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=VC0067 VC0068 VC0068 VC0068 68250 69233 - LysR family transcriptional regulator similar to GB:L10328 SP:P31463 PID:290559 GB:U00096 PID:1790147%3B identified by sequence similarity gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=VC0068 VC0069 VC0069 VC0069 69296 70498 + multidrug resistance protein similar to GB:L10328 SP:P31462 PID:290558 GB:U00096 PID:1790146%3B identified by sequence similarity gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=VC0069 VC0070 VC0070 VC0070 70602 70886 + hypothetical protein gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=VC0070 VC0071 VC0071 VC0071 70975 71436 - DNA-binding transcriptional regulator AsnC transcriptional repressor of asnA which codes for aspartate-ammonia ligase gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=VC0071 VC0072 VC0072 VC0072 71512 73818 + sensory box/GGDEF family protein similar to PID:1651932%3B identified by sequence similarity gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=VC0072 VC0073 VC0073 VC0073 73878 74663 + hypothetical protein gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=VC0073 VC0074 VC0074 VC0074 74781 75170 + hypothetical protein gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=VC0074 VC0075 VC0075 VC0075 75266 76153 - MadN protein similar to PID:2062658%3B identified by sequence similarity gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=VC0075 VC0076 VC0076 VC0076 76210 76635 - universal stress protein A similar to GB:U00039 SP:P28242 GB:X67639 PID:43280 PID:466632%3B identified by sequence similarity gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=VC0076 VC0077 VC0077 VC0077 76681 76776 + hypothetical protein gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=VC0077 VC0078 VC0078 VC0078 76782 77327 + ferritin similar to GB:L42023 SP:P43708 PID:1007433 PID:1221523 PID:1205620%3B identified by sequence similarity gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=VC0078 VC0079 VC0079 VC0079 77403 77726 + universal stress protein UspB 'ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress' gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=VC0079 VC0080 VC0080 VC0080 77859 79055 + hypothetical protein gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=VC0080 VC0081 VC0081 VC0081 79052 79963 - hypothetical protein gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=VC0081 VC0082 VC0082 VC0082 80077 81618 + hypothetical protein gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=VC0082 VC0083 VC0083 ubiE ubiE 81663 82445 + ubiquinone/menaquinone biosynthesis methyltransferase Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=VC0083 VC0084 VC0084 VC0084 82454 83077 + hypothetical protein gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=VC0084 VC0085 VC0085 ubiB ubiB 83074 84708 + ubiquinone biosynthesis protein UbiB an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=VC0085 VC0086 VC0086 tatA tatA 84768 85016 + twin-arginine translocation protein TatA TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=VC0086 VC0087 VC0087 VC0087 85020 85421 + sec-independent translocase mediates the export of protein precursors bearing twin-arginine signal peptides gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=VC0087 VC0088 VC0088 VC0088 85510 86262 + hypothetical protein gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=VC0088 VC0089 VC0089 VC0089 86574 87575 + cytochrome c551 peroxidase similar to GB:AE000657%3B identified by sequence similarity gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=VC0089 VC0090 VC0090 VC0090 87681 89045 - DNA-damage-inducible protein F similar to SP:P28303 PID:146611 PID:396379 GB:U00096 PID:1790477%3B identified by sequence similarity gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=VC0090 VC0091 VC0091 VC0091 89116 89985 - O-methyltransferase-like protein similar to GB:M80674 SP:P39887 PID:153491%3B identified by sequence similarity gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=VC0091 VC0092 VC0092 VC0092 90013 90642 - LexA repressor Represses a number of genes involved in the response to DNA damage gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=VC0092 VC0093 VC0093 VC0093 90962 93388 + glycerol-3-phosphate acyltransferase PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=VC0093 VC0094 VC0094 ubiA ubiA 93464 94318 - 4-hydroxybenzoate octaprenyltransferase 'catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway' gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=VC0094 VC0095 VC0095 VC0095 94319 94870 - chorismate--pyruvate lyase similar to GB:U00006 SP:P26602 GB:M96268 GB:X57434 GB:X66619%3B identified by sequence similarity gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=VC0095 VC0096 VC0096 VC0096 94893 94991 - hypothetical protein gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=VC0096 VC0097 VC0097 VC0097 95062 95472 + flagellar basal body protein FliL similar to GB:AE000657%3B identified by sequence similarity gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=VC0097 VC0098 VC0098 VC0098 95592 97571 - methyl-accepting chemotaxis protein similar to SP:P07017 PID:145521 GB:U00096 PID:1736539 PID:1736545%3B identified by sequence similarity gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=VC0098 VC0099 VC0099 VC0099 97946 98779 - serine protease GlpG similar to GB:M54940 SP:P09391 GB:M96795 PID:146185 PID:146193%3B identified by sequence similarity gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=VC0099 VC0100 VC0100 glpE glpE 98786 99106 - thiosulfate sulfurtransferase belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=VC0100 VC0103 VC0103 VC0103 99867 100634 - hypothetical protein gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=VC0103 VC0105 VC0105 VC0105 100811 101854 + delta-aminolevulinic acid dehydratase catalyzes the formation of porphobilinogen from 5-aminolevulinate gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=VC0105 VC0106 VC0106 VC0106 101958 102389 + hypothetical protein gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=VC0106 VC0108 VC0108 VC0108 103098 105902 + DNA polymerase I 'has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair' gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=VC0108 VC0111 VC0111 engB engB 106649 107311 - ribosome biogenesis GTP-binding protein YsxC binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=VC0111 VC0112 VC0112 VC0112 107409 108080 + cytochrome c4 similar to GB:U05988 PID:516878 SP:Q52369%3B identified by sequence similarity gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=VC0112 VC0113 VC0113 VC0113 108252 108920 + methyltransferase-like protein similar to SP:P37431 PID:295895%3B identified by sequence similarity gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=VC0113 VC0114 VC0114 VC0114 108920 109468 + hypothetical protein gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=VC0114 VC0115 VC0115 VC0115 109475 109966 + hypothetical protein gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=VC0115 VC0116 VC0116 VC0116 110051 111493 + coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=VC0116 VC0117 VC0117 VC0117 111557 112753 - protoheme IX synthesis protein HemY similar to GB:M87049 SP:P09128 GB:X12614 PID:148201 PID:41669%3B identified by sequence similarity gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=VC0117 VC0118 VC0118 VC0118 112750 113949 - uroporphyrin-III C-methyltransferase similar to GB:M87049 SP:P09127 GB:X12614 GB:X13406 PID:148202%3B identified by sequence similarity gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=VC0118 VC0119 VC0119 hemD hemD 113933 114715 - uroporphyrinogen-III synthase catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=VC0119 VC0120 VC0120 hemC hemC 114761 115714 - porphobilinogen deaminase transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=VC0120 VC0121 VC0121 VC0121 115891 116037 - hypothetical protein gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=VC0121 VC0122 VC0122 cyaA cyaA 116053 118584 + adenylate cyclase catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=VC0122 VC0123 VC0123 cyaY cyaY 118690 119004 - frataxin-like protein defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=VC0123 VC0124 VC0124 VC0124 118981 119196 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=VC0124 VC0125 VC0125 VC0125 119229 120482 + diaminopimelate decarboxylase similar to SP:P19572%3B identified by sequence similarity gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=VC0125 VC0126 VC0126 dapF dapF 120494 121324 + diaminopimelate epimerase involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=VC0126 VC0127 VC0127 VC0127 121338 122036 + hypothetical protein gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=VC0127 VC0128 VC0128 xerC xerC 122005 122940 + site-specific tyrosine recombinase XerC site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=VC0128 VC0129 VC0129 VC0129 122943 123662 + hypothetical protein gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=VC0129 VC0130 VC0130 VC0130 123772 126261 + GGDEF family protein similar to SP:P55552 PID:2182511%3B identified by sequence similarity gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=VC0130 VC0131 VC0131 VC0131 126294 126890 - hypothetical protein gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=VC0131 VC0132 VC0132 VC0132 126887 128431 - hypothetical protein gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=VC0132 VC0134 VC0134 VC0134 128715 129542 - hypothetical protein gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=VC0134 VC0135 VC0135 VC0135 129657 130673 - lysophospholipase L2 similar to PID:1449198%3B identified by sequence similarity gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=VC0135 VC0136 VC0136 rhtB rhtB 130748 131365 + homoserine/homoserine lactone efflux protein gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=VC0136 VC0137 VC0137 VC0137 131385 132611 + hypothetical protein gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=VC0137 VC0139 VC0139 VC0139 132791 133261 - DPS family protein similar to GB:L42023 SP:P45173 PID:1007363 PID:1221482 PID:1205585%3B identified by sequence similarity gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=VC0139 VC0140 VC0140 VC0140 133431 133760 - hypothetical protein gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=VC0140 VC0142 VC0142 VC0142 133965 134333 + hypothetical protein gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=VC0142 VC0142a VC0142a VC0142a 134395 134475 - hypothetical protein gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=VC0142a VC0143 VC0143 VC0143 134836 135093 + hypothetical protein gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=VC0143 VC0144 VC0144 VC0144 135210 135839 + hypothetical protein gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=VC0144 VC0145 VC0145 VC0145 135888 136154 - hypothetical protein gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=VC0145 VC0146 VC0146 VC0146 136151 136750 - hypothetical protein gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=VC0146 VC0147 VC0147 VC0147 136954 138129 + cell division protein FtsY similar to SP:P10121 GB:U00039 GB:X04398 PID:41498 PID:466600%3B identified by sequence similarity gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=VC0147 VC0148 VC0148 VC0148 138151 138852 + cell division ATP-binding protein FtsE similar to SP:P10115 GB:U00039 GB:X04398 PID:41499 PID:466599%3B identified by sequence similarity gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=VC0148 VC0149 VC0149 VC0149 138842 139834 + cell division protein FtsX similar to SP:P10122 GB:U00039 GB:X04398 PID:41500 PID:466598%3B identified by sequence similarity gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=VC0149 VC0150 VC0150 VC0150 140004 140864 + RNA polymerase factor sigma-32 binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=VC0150 VC0151 VC0151 VC0151 141066 142466 - soluble pyridine nucleotide transhydrogenase catalyzes the conversion of NADPH to NADH gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=VC0151 VC0152 VC0152 VC0152 142774 143415 + DNA-binding transcriptional repressor FabR 'negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis' gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=VC0152 VC0153 VC0153 VC0153 143455 143826 + hypothetical protein gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=VC0153 VC0154 VC0154 VC0154 143863 144972 - tRNA (uracil-5-)-methyltransferase catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=VC0154 VC0156 VC0156 VC0156 145370 147205 + vitamin B12 receptor similar to SP:P06129 GB:L14556 GB:M10112 PID:145440 PID:290427%3B identified by sequence similarity gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=VC0156 VC0157 VC0157 VC0157 147278 148885 - alkaline serine protease similar to GB:M25499 SP:P16588 PID:155251%3B identified by sequence similarity gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=VC0157 VC0158 VC0158 VC0158 149278 150075 + glutamate racemase 'converts L-glutamate to D-glutamate%2C a component of peptidoglycan' gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=VC0158 VC0159 VC0159 VC0159 150041 150499 - RNA-binding protein similar to GB:AE000511 PID:2313961%3B identified by sequence similarity gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=VC0159 VC0161 VC0161 VC0161 156407 157303 - DNA-binding transcriptional regulator IlvY participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=VC0161 VC0162 VC0162 VC0162 157441 158925 + ketol-acid reductoisomerase 'catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis' gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=VC0162 VC0163 VC0163 VC0163 159052 159303 - hypothetical protein gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=VC0163 VC0164 VC0164 VC0164 159419 162529 - multidrug resistance protein similar to GB:L42023 PID:1005991 PID:1220999 PID:1205142 SP:Q57124%3B identified by sequence similarity gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=VC0164 VC0165 VC0165 VC0165 162541 163647 - hypothetical protein gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=VC0165 VC0166 VC0166 VC0166 163666 164262 - TetR family transcriptional regulator similar to GB:L42023 SP:P44923 PID:1005987 PID:1220997 PID:1205140%3B identified by sequence similarity gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=VC0166 VC0167 VC0167 VC0167 164408 166423 + ATP-dependent DNA helicase Rep similar to GB:M87049 SP:P09980 GB:X04794 PID:148182 GB:U00096%3B identified by sequence similarity gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=VC0167 VC0168 VC0168 VC0168 166490 166897 - cytochrome c5 similar to PID:2231996%3B identified by sequence similarity gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=VC0168 VC0169 VC0169 VC0169 168232 168399 - hypothetical protein gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=VC0169 VC0170 VC0170 VC0170 168532 170247 + peptide ABC transporter ATP-binding protein similar to GB:U00096 PID:1787051%3B identified by sequence similarity gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=VC0170 VC0171 VC0171 VC0171 170339 171895 + peptide ABC transporter substrate-binding protein similar to SP:P23847 GB:M35045 GB:X58051 PID:145797 PID:349225%3B identified by sequence similarity gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=VC0171 VC0172 VC0172 VC0172 171999 173027 + peptide ABC transporter permease similar to PID:1813496%3B identified by sequence similarity gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=VC0172 VC0173 VC0173 VC0173 173030 173968 + peptide ABC transporter permease similar to SP:P37315 PID:349227 PID:466681 GB:U00096 PID:1789964%3B identified by sequence similarity gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=VC0173 VC0174 VC0174 VC0174 174143 175090 + hypothetical protein gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=VC0174 VC0175 VC0175 VC0175 175343 176941 - deoxycytidylate deaminase-like protein similar to GB:AE000782%3B identified by sequence similarity gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=VC0175 VC0176 VC0176 VC0176 177450 177758 - transcriptional regulator similar to GB:M36477 SP:P23789 GB:M36478 PID:143833 PID:1225936%3B identified by sequence similarity gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=VC0176 VC0177 VC0177 VC0177 177861 178424 + hypothetical protein gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=VC0177 VC0178 VC0178 VC0178 179338 180405 + patatin-like protein similar to SP:P11768 PID:169498 PID:169500 PID:21415%3B identified by sequence similarity gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=VC0178 VC0179 VC0179 VC0179 180419 181729 + hypothetical protein gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=VC0179 VC0180 VC0180 VC0180 181732 183486 + hypothetical protein gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=VC0180 VC0181 VC0181 VC0181 183476 183946 + hypothetical protein gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=VC0181 VC0182 VC0182 VC0182 183957 184388 - hypothetical protein gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=VC0182 VC0183 VC0183 VC0183 184360 186471 - hypothetical protein gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=VC0183 VC0184 VC0184 VC0184 186481 188169 - hypothetical protein gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=VC0184 VC0185 VC0185 VC0185 188166 189380 - transposase similar to SP:P06696 PID:581277 PID:154921%3B identified by sequence similarity gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=VC0185 VC0186 VC0186 VC0186 189457 190821 - glutathione reductase catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=VC0186 VC0187 VC0187 VC0187 190915 191754 - hypothetical protein gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=VC0187 VC0188 VC0188 VC0188 192034 194076 + oligopeptidase A similar to GB:M84574 SP:P27237 PID:154214%3B identified by sequence similarity gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=VC0188 VC0190 VC0190 uvrD uvrD 194214 196385 + DNA-dependent helicase II unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=VC0190 VC0191 VC0191 VC0191 197130 197798 - hypothetical protein gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=VC0191 VC0192 VC0192 VC0192 197873 198685 - AraC family transcriptional regulator similar to GP:3294250%3B identified by sequence similarity gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=VC0192 VC0194 VC0194 VC0194 198833 200599 - gamma-glutamyltranspeptidase similar to GB:AL123456%3B identified by sequence similarity gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=VC0194 VC0195 VC0195 VC0195 200761 201669 - RarD protein similar to SP:P27844 PID:145580 GB:U00096 PID:1790252%3B identified by sequence similarity gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=VC0195 VC0196 VC0196 VC0196 201830 203665 + ATP-dependent DNA helicase RecQ 'functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway' gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=VC0196 VC0197 VC0197 VC0197 203658 203957 + hypothetical protein similar to GP:2058400%3B identified by sequence similarity gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=VC0197 VC0198 VC0198 VC0198 204113 204490 + hypothetical protein gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=VC0198 VC0199 VC0199 VC0199 204526 206361 - hemolysin secretion ATP-binding protein similar to GB:L42023 PID:1006302 PID:1221167 PID:1205301 SP:Q57180%3B identified by sequence similarity gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=VC0199 VC0200 VC0200 VC0200 206433 208589 + iron(III) compound receptor similar to GB:D26562 SP:P06971 GB:M12486 PID:145949 PID:473809%3B identified by sequence similarity gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=VC0200 VC0201 VC0201 VC0201 208720 209505 + iron(III) ABC transporter ATP-binding protein similar to PID:41440 GB:U00096 PID:1552729 PID:1786345%3B identified by sequence similarity gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=VC0201 VC0202 VC0202 VC0202 209496 210455 + iron(III) ABC transporter substrate-binding protein similar to GB:D26562 SP:P07822 GB:M12486 PID:145951 PID:41441%3B identified by sequence similarity gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=VC0202 VC0203 VC0203 VC0203 210452 212413 + iron-hydroxamate transporter permease part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=VC0203 VC0204 VC0204 VC0204 212440 213288 - hypothetical protein gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=VC0204 VC0205 VC0205 VC0205 213331 213522 + hypothetical protein gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=VC0205 VC0206 VC0206 murQ murQ 213504 214421 + N-acetylmuramic acid-6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=VC0206 VC0207 VC0207 murP murP 214449 215897 + PTS system N-acetylmuramic acid transporter subunits IIBC belongs to PEP-dependent PTS system%3B contains the PTS EIIBC domains%3B involved in uptake of exogenous N-acetylmuramic acid (MurNAc)%3B requires crr-encoded enzyme IIA-glucose component gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=VC0207 VC0208 VC0208 VC0208 216004 216492 - hypothetical protein gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=VC0208 VC0209 VC0209 VC0209 216558 217424 - hypothetical protein gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=VC0209 VC0210 VC0210 rph rph 217588 218304 + ribonuclease PH RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=VC0210 VC0211 VC0211 pyrE pyrE 218670 219311 + orotate phosphoribosyltransferase involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=VC0211 VC0212 VC0212 VC0212 219397 220374 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 'Transfers myristate or laurate%2C activated on ACP%2C to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA' gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=VC0212 VC0213 VC0213 VC0213 220385 221341 - lipid A biosynthesis lauroyl acyltransferase Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=VC0213 VC0214 VC0214 slmA slmA 221338 221928 - nucleoid occlusion protein FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=VC0214 VC0215 VC0215 VC0215 222087 223286 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 'catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine' gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=VC0215 VC0216 VC0216 VC0216 223454 225148 + methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=VC0216 VC0217 VC0217 radC radC 225260 225934 + DNA repair protein RadC Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=VC0217 VC0218 VC0218 rpmB rpmB 226229 226465 + 50S ribosomal protein L28 required for 70S ribosome assembly gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=VC0218 VC0219 VC0219 rpmG rpmG 226479 226646 + 50S ribosomal protein L33 'in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif' gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=VC0219 VC0220 VC0220 VC0220 226867 227355 + hypothetical protein gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=VC0220 VC0221 VC0221 VC0221 227365 228174 + formamidopyrimidine-DNA glycosylase Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=VC0221 VC0222 VC0222 coaD coaD 228271 228765 - phosphopantetheine adenylyltransferase Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=VC0222 VC0223 VC0223 VC0223 228876 229913 + ADP-heptose--LPS heptosyltransferase II similar to GB:L42023 SP:P44011 PID:1003930 PID:1222457 PID:1204774%3B identified by sequence similarity gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=VC0223 VC0224 VC0224 VC0224 229975 230754 - lipopolysaccharide biosynthesis glycosyltransferase similar to GB:L42023 SP:P44029 PID:1005522 PID:1220737 PID:1204904%3B identified by sequence similarity gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=VC0224 VC0225 VC0225 VC0225 230797 231870 - lipopolysaccharide biosynthesis protein similar to GB:L42023 PID:1003419 PID:1222185 PID:1204517 PID:1573227%3B identified by sequence similarity gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=VC0225 VC0227 VC0227 VC0227 231950 232705 + 3-deoxy-D-manno-octulosonic-acid kinase catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=VC0227 VC0228 VC0228 VC0228 232709 233668 + hypothetical protein gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=VC0228 VC0229 VC0229 VC0229 233672 234601 - hypothetical protein gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=VC0229 VC0230 VC0230 VC0230 234598 235341 - hypothetical protein gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=VC0230 VC0231 VC0231 VC0231 235338 236921 - hypothetical protein gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=VC0231 VC0232 VC0232 VC0232 236912 237292 - hypothetical protein gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=VC0232 VC0233 VC0233 VC0233 237289 238608 - 3-deoxy-D-manno-octulosonic-acid transferase catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=VC0233 VC0234 VC0234 VC0234 238569 239357 - hypothetical protein gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=VC0234 VC0235 VC0235 VC0235 239354 240403 - lipopolysaccharide biosynthesis protein similar to PID:992970%3B identified by sequence similarity gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=VC0235 VC0236 VC0236 VC0236 240400 241440 - ADP-heptose--LPS heptosyltransferase II similar to PID:1916630%3B identified by sequence similarity gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=VC0236 VC0237 VC0237 VC0237 241437 242636 - hypothetical protein gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=VC0237 VC0238 VC0238 VC0238 242638 243204 - hexapaptide repeat-containing transferase similar to GB:L77117 PID:1591716%3B identified by sequence similarity gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=VC0238 VC0239 VC0239 VC0239 243212 244984 - hypothetical protein gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=VC0239 VC0240 VC0240 rfaD rfaD 245143 246087 - ADP-L-glycero-D-manno-heptose-6-epimerase catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=VC0240 VC0241 VC0241 VC0241 246640 247926 + mannose-1-phosphate guanylyltransferase similar to GB:X59554 SP:Q07024 PID:48383%3B identified by sequence similarity gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=VC0241 VC0242 VC0242 VC0242 247929 249320 + phosphomannomutase similar to GB:X59554 SP:Q06951 PID:581822%3B identified by sequence similarity gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=VC0242 VC0243 VC0243 VC0243 249323 250444 + GDP-mannose 4%2C6-dehydratase similar to GB:X59554 PID:48385%3B identified by sequence similarity gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=VC0243 VC0244 VC0244 VC0244 250455 251558 + perosamine synthase similar to GB:X59554 PID:48386%3B identified by sequence similarity gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=VC0244 VC0245 VC0245 VC0245 251555 252946 + RfbG protein similar to GB:X59554 PID:48387%3B identified by sequence similarity gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=VC0245 VC0246 VC0246 VC0246 252918 253712 + lipopolysaccharide/O-antigen transport protein similar to GB:X59554 PID:48388%3B identified by sequence similarity gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=VC0246 VC0247 VC0247 VC0247 253651 254466 + lipopolysaccharide/O-antigen transport protein similar to GB:X59554 PID:48389%3B identified by sequence similarity gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=VC0247 VC0248 VC0248 VC0248 254505 254747 + acyl carrier protein similar to GB:X59554 PID:48390%3B identified by sequence similarity gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=VC0248 VC0249 VC0249 VC0249 254753 256168 + RfbL protein similar to GB:X59554 PID:48391%3B identified by sequence similarity gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=VC0249 VC0250 VC0250 VC0250 256177 257301 + iron-containing alcohol dehydrogenase similar to GB:M26941 SP:P13604 PID:144714%3B identified by sequence similarity gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=VC0250 VC0251 VC0251 VC0251 257292 259769 + acyl protein synthase/acyl-CoA reductase RfbN similar to GB:X59554 PID:48393%3B identified by sequence similarity gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=VC0251 VC0252 VC0252 VC0252 259839 260405 + acetyltransferase similar to GB:X59554 PID:48394%3B identified by sequence similarity gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=VC0252 VC0254 VC0254 VC0254 260793 261920 + 'This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact.' gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=VC0254 VC0255 VC0255 VC0255 262098 262319 + RfbT-like protein similar to GP:48424%3B identified by sequence similarity gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=VC0255 VC0256 VC0256 VC0256 262326 262670 + transposase OrfAB subunit A similar to SP:P39213%3B identified by sequence similarity gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=VC0256 VC0257 VC0257 VC0257 262667 263539 + transposase OrfAB subunit B similar to GP:3337013%3B identified by sequence similarity gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=VC0257 VC0258 VC0258 VC0258 263420 264219 + gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=VC0258 VC0259 VC0259 VC0259 264254 265366 - lipopolysaccharide biosynthesis protein RfbV similar to GB:X59554 PID:48400 PID:1929424%3B identified by sequence similarity gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=VC0259 VC0260 VC0260 VC0260 265374 267239 - mannosyltransferase similar to PID:1929425%3B identified by sequence similarity gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=VC0260 VC0262 VC0262 VC0262 267392 268363 + UDP-glucose 4-epimerase similar to PID:1929426%3B identified by sequence similarity gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=VC0262 VC0263 VC0263 VC0263 268371 268925 + galactosyl-transferase similar to PID:1929427%3B identified by sequence similarity gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=VC0263 VC0264 VC0264 VC0264 269068 270435 + hypothetical protein gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=VC0264 VC0265 VC0265 VC0265 270697 271935 - hypothetical protein gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=VC0265 VC0266 VC0266 VC0266 271990 272562 - hypothetical protein gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=VC0266 VC0267 VC0267 VC0267 272562 273485 - D-isomer specific 2-hydroxyacid dehydrogenase family protein similar to GB:Z11929 SP:P43169 PID:46871%3B identified by sequence similarity gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=VC0267 VC0268 VC0268 VC0268 273559 274146 + hypothetical protein gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=VC0268 VC0269 VC0269 VC0269 274509 275708 + mannose-6-phosphate isomerase similar to SP:P25081 GB:X57117 PID:48820%3B identified by sequence similarity gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=VC0269 VC0270 VC0270 VC0270 275674 276654 + ROK family protein similar to SP:P23917 GB:X76979 PID:145329 PID:581151 GB:U00096%3B identified by sequence similarity gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=VC0270 VC0271 VC0271 VC0271 277002 278060 - hypothetical protein gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=VC0271 VC0273 VC0273 VC0273 278432 278704 + DNA-binding protein HU similar to SP:P28080 PID:141878%3B identified by sequence similarity gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=VC0273 VC0274 VC0274 VC0274 278705 279439 + hypothetical protein gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=VC0274 VC0275 VC0275 VC0275 279539 280828 - phosphoribosylamine--glycine ligase catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=VC0275 VC0276 VC0276 purH purH 280887 282479 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase involved in de novo purine biosynthesis gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=VC0276 VC0277 VC0277 zntR zntR 282765 283166 + zinc-responsive transcriptional regulator mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=VC0277 VC0278 VC0278 VC0278 283393 284952 + DNA-binding transcriptional activator CadC regulates the cadBA operon gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=VC0278 VC0280 VC0280 cadB cadB 285652 286989 + lysine/cadaverine antiporter antiporter protein responsible for lysine import and cadaverine export%3B member of the lysine-dependent acid resistance system 4 (AR4)%3B inner membrane protein gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=VC0280 VC0281 VC0281 VC0281 287033 289234 + lysine decarboxylase%2C inducible similar to SP:P23892 GB:M67452 GB:M76411 PID:145454 PID:145458%3B identified by sequence similarity gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=VC0281 VC0282 VC0282 VC0282 289352 291022 - methyl-accepting chemotaxis protein similar to PID:1066850%3B identified by sequence similarity gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=VC0282 VC0283 VC0283 VC0283 291257 291934 - hypothetical protein gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=VC0283 VC0284 VC0284 VC0284 291955 293997 - 'This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact.' gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=VC0284 VC0285 VC0285 VC0285 294219 294824 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=VC0285 VC0286 VC0286 VC0286 294837 296213 - gluconate permease similar to PID:882633 GB:U00096 PID:1789097%3B identified by sequence similarity gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=VC0286 VC0287 VC0287 VC0287 296367 296882 + thermoresistant gluconokinase similar to SP:P46859 PID:606372 GB:U00096 PID:1304070 PID:1789845%3B identified by sequence similarity gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=VC0287 VC0288 VC0288 VC0288 296879 298675 + phosphogluconate dehydratase catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=VC0288 VC0289 VC0289 VC0289 298752 299750 - gluconate utilization system gnt-I transcriptional repressor similar to PID:1304069%3B identified by sequence similarity gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=VC0289 VC0290 VC0290 fis fis 299889 300185 - Fis family transcriptional regulator Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=VC0290 VC0291 VC0291 VC0291 300209 301204 - NifR3/Smm1 family protein similar to GB:M95784 SP:P25717 GB:X62399 PID:145976 PID:41472%3B identified by sequence similarity gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=VC0291 VC0293 VC0293 prmA prmA 301317 302204 - ribosomal protein L11 methyltransferase methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=VC0293 VC0295 VC0295 VC0295 302413 303756 - acetyl-CoA carboxylase biotin carboxylase subunit 'an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism' gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=VC0295 VC0296 VC0296 VC0296 303771 304232 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 'composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism' gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=VC0296 VC0297 VC0297 VC0297 304289 304741 - 3-dehydroquinate dehydratase catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=VC0297 VC0298 VC0298 VC0298 305121 307070 - acetyl-CoA synthetase Acs%3B catalyzes the conversion of acetate and CoA to acetyl-CoA gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=VC0298 VC0299 VC0299 VC0299 307273 307944 - DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=VC0299 VC0300 VC0300 VC0300 307911 309734 - hypothetical protein gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=VC0300 VC0301 VC0301 VC0301 309689 309895 - hypothetical protein gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=VC0301 VC0302 VC0302 VC0302 309994 311184 + 3-phenylpropionic acid transporter transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=VC0302 VC0303 VC0303 VC0303 311277 314720 + sensor histidine kinase similar to GP:2808665%3B identified by sequence similarity gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=VC0303 VC0304 VC0304 VC0304 314843 316336 - guanosine pentaphosphate phosphohydrolase 'catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation' gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=VC0304 VC0305 VC0305 VC0305 316344 317660 - ATP-dependent RNA helicase RhlB 'enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation' gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=VC0305 VC0306 VC0306 VC0306 317772 318098 + thioredoxin similar to SP:P00274 GB:M87049 GB:K02845 GB:M10424 GB:M12779%3B identified by sequence similarity gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=VC0306 VC0307 VC0307 rho rho 318296 319555 + transcription termination factor Rho An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=VC0307 VC0308 VC0308 VC0308 319654 320646 + hypothetical protein gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=VC0308 VC0309 VC0309 VC0309 320728 322569 + hypothetical protein gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=VC0309 VC0311 VC0311 VC0311 322566 322835 + ferredoxin similar to SP:P46047 PID:599651%3B identified by sequence similarity gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=VC0311 VC0312 VC0312 fre fre 322851 323561 + FMN reductase NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=VC0312 VC0315 VC0315 pssA pssA 329711 331051 - phosphatidylserine synthase catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=VC0315 VC0317 VC0317 VC0317 331146 331592 - hypothetical protein gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=VC0317 VC0318 VC0318 murB murB 331605 332678 + UDP-N-acetylenolpyruvoylglucosamine reductase catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=VC0318 VC0319 VC0319 VC0319 332675 333637 + biotin--protein ligase 'catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon' gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=VC0319 VC0320 VC0320 VC0320 333687 334814 - pantothenate kinase catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=VC0320 VC0321 VC0321 tuf tuf 335326 336510 + elongation factor Tu 'EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu' gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=VC0321 VC0322 VC0322 secE secE 336719 337114 + preprotein translocase subunit SecE 'forms a complex with SecY and SecG%3B SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force' gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=VC0322 VC0323 VC0323 nusG nusG 337130 337678 + transcription antitermination protein NusG Modulates Rho-dependent transcription termination gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=VC0323 VC0324 VC0324 rplK rplK 337809 338237 + 50S ribosomal protein L11 binds directly to 23S ribosomal RNA gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=VC0324 VC0325 VC0325 rplA rplA 338242 338943 + 50S ribosomal protein L1 'in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA' gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=VC0325 VC0326 VC0326 rplJ rplJ 339213 339701 + 50S ribosomal protein L10 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=VC0326 VC0327 VC0327 rplL rplL 339768 340133 + 50S ribosomal protein L7/L12 'present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors' gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=VC0327 VC0328 VC0328 rpoB rpoB 340374 344399 + DNA-directed RNA polymerase subunit beta DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=VC0328 VC0329 VC0329 VC0329 344504 348709 + DNA-directed RNA polymerase subunit beta' DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=VC0329 VC0330 VC0330 VC0330 348820 349314 - anti-RNA polymerase sigma 70 factor binds specifically to the major sigma factor sigma 70%3B active in stationary phase gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=VC0330 VC0331 VC0331 nudC nudC 349459 350268 + NADH pyrophosphatase can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=VC0331 VC0332 VC0332 hemE hemE 350511 351590 + uroporphyrinogen decarboxylase catalyzes the formation of coproporphyrinogen from uroporphyrinogen III gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=VC0332 VC0333 VC0333 VC0333 351596 352324 + TetR family transcriptional regulator similar to GB:X66592 PID:45394%3B identified by sequence similarity gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=VC0333 VC0334 VC0334 VC0334 352411 353370 + hypothetical protein gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=VC0334 VC0335 VC0335 VC0335 353367 354515 - NlpD-like protein similar to SP:P37690 PID:466751 GB:U00096 PID:1790042%3B identified by sequence similarity gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=VC0335 VC0336 VC0336 VC0336 354684 356216 - phosphoglyceromutase catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=VC0336 VC0337 VC0337 VC0337 356359 357300 - hypothetical protein gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=VC0337 VC0338 VC0338 VC0338 357398 358834 - transporter similar to GB:AE000666%3B identified by sequence similarity gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=VC0338 VC0339 VC0339 psd psd 359021 359878 - phosphatidylserine decarboxylase catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=VC0339 VC0340 VC0340 VC0340 359871 361034 - ribosome-associated GTPase circularly permuted GTPase%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B indispensable for growth in Escherichia coli and Bacillus subtilis%3B interacts strongly with 30S ribosome which stimulates GTPase activity gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=VC0340 VC0341 VC0341 VC0341 361157 361702 + oligoribonuclease 3'-5' exoribonuclease specific for small oligoribonuclotides gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=VC0341 VC0342 VC0342 VC0342 363575 364684 - (Fe-S)-binding protein similar to GB:U14003 SP:P39288 PID:537007 GB:U00096 PID:1790608%3B identified by sequence similarity gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=VC0342 VC0343 VC0343 VC0343 364889 365353 + hypothetical protein gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=VC0343 VC0344 VC0344 VC0344 365320 367065 + N-acetylmuramoyl-L-alanine amidase similar to SP:P26365 GB:Z11831 PID:304914 PID:42068 PID:537010%3B identified by sequence similarity gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=VC0344 VC0345 VC0345 mutL mutL 367072 369033 + DNA mismatch repair protein This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=VC0345 VC0346 VC0346 miaA miaA 369030 369977 + tRNA delta(2)-isopentenylpyrophosphate transferase IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=VC0346 VC0347 VC0347 hfq hfq 370149 370412 + RNA-binding protein Hfq Stimulates the elongation of poly(A) tails gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=VC0347 VC0348 VC0348 VC0348 370445 371734 + GTPase HflX involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=VC0348 VC0349 VC0349 VC0349 371780 372967 + HflK protein similar to GB:U09005 SP:P40605 PID:507734%3B identified by sequence similarity gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=VC0349 VC0350 VC0350 VC0350 372970 373950 + HflC protein similar to GB:U09005 SP:P40606 PID:507735%3B identified by sequence similarity gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=VC0350 VC0351 VC0351 VC0351 373993 374199 + hypothetical protein gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=VC0351 VC0352 VC0352 VC0352 374240 374467 - hypothetical protein similar to GB:L42023 SP:P44759 PID:1004028 PID:1222511 PID:1204822%3B identified by sequence similarity gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=VC0352 VC0353 VC0353 VC0353 374470 375453 - hypothetical protein gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=VC0353 VC0354 VC0354 VC0354 375590 376369 + FKBP-type peptidylprolyl isomerase similar to SP:P45523 SP:P39175 PID:606281 PID:862300 GB:U00096%3B identified by sequence similarity gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=VC0354 VC0355 VC0355 VC0355 376568 377290 + hypothetical protein gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=VC0355 VC0356 VC0356 VC0356 377287 377682 + sulfur transfer complex subunit TusD in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=VC0356 VC0357 VC0357 VC0357 377679 378035 + hypothetical protein gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=VC0357 VC0358 VC0358 VC0358 378045 378320 + hypothetical protein gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=VC0358 VC0359 VC0359 rpsL rpsL 378505 378879 + 30S ribosomal protein S12 'interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance' gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=VC0359 VC0360 VC0360 VC0360 378995 379465 + 30S ribosomal protein S7 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=VC0360 VC0361 VC0361 fusA fusA 379541 381637 + elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=VC0361 VC0362 VC0362 tuf tuf 381760 382944 + elongation factor Tu 'EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu' gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=VC0362 VC0364 VC0364 VC0364 383247 383435 + bacterioferritin-associated ferredoxin similar to GB:M27176 SP:P13655 PID:145408 PID:606271 GB:U00096%3B identified by sequence similarity gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=VC0364 VC0365 VC0365 VC0365 383505 383981 + bacterioferritin similar to GB:M83692 SP:P22759 PID:142298%3B identified by sequence similarity gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=VC0365 VC0366 VC0366 rpsF rpsF 384193 384561 + 30S ribosomal protein S6 'binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21' gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=VC0366 VC0367 VC0367 VC0367 384569 384871 + primosomal replication protein N binds single-stranded DNA at the primosome assembly site gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=VC0367 VC0368 VC0368 rpsR rpsR 384887 385114 + 30S ribosomal protein S18 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=VC0368 VC0369 VC0369 rplI rplI 385148 385597 + 50S ribosomal protein L9 in Escherichia coli this protein is wrapped around the base of the L1 stalk gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=VC0369 VC0370 VC0370 VC0370 385659 386468 - hypothetical protein gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=VC0370 VC0371 VC0371 VC0371 386594 388000 + replicative DNA helicase unwinds double stranded DNA gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=VC0371 VC0372 VC0372 alr alr 387972 389099 + alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=VC0372 VC0373 VC0373 VC0373 389182 389601 - hypothetical protein gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=VC0373 VC0374 VC0374 pgi pgi 389886 391538 + glucose-6-phosphate isomerase functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=VC0374 VC0376 VC0376 VC0376 391741 392919 + hypothetical protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=VC0376 VC0377 VC0377 VC0377 393036 393497 - hypothetical protein gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=VC0377 VC0378 VC0378 VC0378 393507 393974 - zinc uptake regulation protein similar to SP:P32692 PID:409798 GB:U00096 PID:1790480%3B identified by sequence similarity gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=VC0378 VC0379 VC0379 VC0379 394329 395312 + tRNA-dihydrouridine synthase A similar to SP:P32695 PID:396384 GB:U00096 PID:1790483%3B identified by sequence similarity gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=VC0379 VC0379a VC0379a VC0379a 395473 395685 + phage shock protein G gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=VC0379a VC0381 VC0381 VC0381 395774 396439 + hypothetical protein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=VC0381 VC0382 VC0382 VC0382 396393 396563 + hypothetical protein gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=VC0382 VC0383 VC0383 VC0383 396521 396790 + hypothetical protein gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=VC0383 VC0384 VC0384 VC0384 396876 398720 + sulfite reductase (NADPH) flavoprotein subunit alpha similar to GB:M23008 SP:P38038 PID:145678 PID:145680 PID:882657%3B identified by sequence similarity gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=VC0384 VC0385 VC0385 VC0385 398720 400453 + sulfite reductase subunit beta hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=VC0385 VC0386 VC0386 VC0386 400446 401207 + phosphoadenosine phosphosulfate reductase catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=VC0386 VC0389 VC0389 VC0389 407506 408840 - Na+/H+ antiporter similar to GP:3327262%3B identified by sequence similarity gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=VC0389 VC0390 VC0390 metH metH 409037 412717 + B12-dependent methionine synthase one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=VC0390 VC0391 VC0391 VC0391 412790 414145 - aspartate kinase catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=VC0391 VC0392 VC0392 VC0392 414609 415727 + class V aminotransferase similar to SP:P31030 PID:164759%3B identified by sequence similarity gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=VC0392 VC0393 VC0393 VC0393 415806 417599 - hypothetical protein gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=VC0393 VC0394 VC0394 uvrA uvrA 417655 420477 - excinuclease ABC subunit A 'The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB%2C the uvrA molecules dissociate' gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=VC0394 VC0395 VC0395 VC0395 420633 421508 - UTP-glucose-1-phosphate uridylyltransferase similar to GB:U03751 PID:432985 SP:Q59633 PID:1345068%3B identified by sequence similarity gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=VC0395 VC0396 VC0396 VC0396 421678 422322 - LuxR family transcriptional regulator similar to PID:1147562 SP:P52106 GB:U00096 PID:1787277%3B identified by sequence similarity gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=VC0396 VC0397 VC0397 VC0397 422614 423147 + single-stranded DNA-binding protein binds to single stranded DNA and PriA helcase facilitate replication restart gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=VC0397 VC0398 VC0398 VC0398 423262 425283 + regulatory protein CsrD regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=VC0398 VC0399 VC0399 VC0399 425296 426735 + MSHA biogenesis protein MshI similar to PID:791156 PID:791153%3B identified by sequence similarity gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=VC0399 VC0400 VC0400 VC0400 426732 427382 + MSHA biogenesis protein MshJ similar to PID:791156 PID:791154%3B identified by sequence similarity gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=VC0400 VC0401 VC0401 VC0401 427375 427692 + MSHA biogenesis protein MshK similar to PID:791156 PID:791155%3B identified by sequence similarity gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=VC0401 VC0402 VC0402 VC0402 427707 429386 + MSHA biogenesis protein MshL similar to PID:791156%3B identified by sequence similarity gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=VC0402 VC0403 VC0403 VC0403 429391 430236 + MSHA biogenesis protein MshM similar to PID:791156 PID:791157%3B identified by sequence similarity gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=VC0403 VC0404 VC0404 VC0404 430215 431384 + MSHA biogenesis protein MshN similar to PID:791156 PID:791158%3B identified by sequence similarity gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=VC0404 VC0405 VC0405 VC0405 431374 433101 + MSHA biogenesis protein MshE similar to PID:791156 PID:791159%3B identified by sequence similarity gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=VC0405 VC0406 VC0406 VC0406 433110 434333 + MSHA biogenesis protein MshG similar to PID:1016255 PID:1016256%3B identified by sequence similarity gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=VC0406 VC0407 VC0407 VC0407 434336 434788 + MSHA biogenesis protein MshF similar to GB:X77217 PID:496757%3B identified by sequence similarity gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=VC0407 VC0408 VC0408 VC0408 434833 435423 + MSHA pilin protein MshB similar to GB:X77217 PID:496758%3B identified by sequence similarity gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=VC0408 VC0409 VC0409 VC0409 435449 435985 + MSHA pilin protein MshA similar to GP:673504%3B identified by sequence similarity gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=VC0409 VC0410 VC0410 VC0410 436022 436510 + MSHA pilin protein MshC similar to GB:X77217 PID:496759%3B identified by sequence similarity gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=VC0410 VC0411 VC0411 VC0411 436458 437069 + MSHA pilin protein MshD similar to GB:X77217 PID:673506 PID:673507%3B identified by sequence similarity gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=VC0411 VC0412 VC0412 VC0412 437069 437839 + hypothetical protein gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=VC0412 VC0413 VC0413 VC0413 437805 438236 + hypothetical protein gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=VC0413 VC0414 VC0414 VC0414 438229 441987 + hypothetical protein gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=VC0414 VC0415 VC0415 VC0415 442155 443198 + rod shape-determining protein MreB functions in MreBCD complex in some organisms gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=VC0415 VC0416 VC0416 VC0416 443255 444145 + rod shape-determining protein MreC in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=VC0416 VC0417 VC0417 VC0417 444132 444620 + rod shape-determining protein MreD part of cell wall structural complex MreBCD%3B transmembrane component gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=VC0417 VC0418 VC0418 maf maf 444563 445180 + Maf-like protein Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=VC0418 VC0419 VC0419 VC0419 445206 446675 + ribonuclease G involved in the processing of the 5'end of 16S rRNA gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=VC0419 VC0420 VC0420 VC0420 446688 450563 + hypothetical protein gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=VC0420 VC0421 VC0421 VC0421 450572 451399 + hypothetical protein gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=VC0421 VC0422 VC0422 VC0422 451399 452844 + tldD protein similar to SP:P46473 PID:606183 GB:U00096 PID:1732437 PID:1789640%3B identified by sequence similarity gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=VC0422 VC0423 VC0423 VC0423 452940 454163 - arginine deiminase catalyzes the degradation of arginine to citruline and ammonia gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=VC0423 VC0424 VC0424 VC0424 454890 455312 + hypothetical protein gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=VC0424 VC0425 VC0425 VC0425 455459 456256 + hypothetical protein gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=VC0425 VC0426 VC0426 VC0426 456325 456708 - hypothetical protein gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=VC0426 VC0428 VC0428 VC0428 456859 457296 - hypothetical protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=VC0428 VC0429 VC0429 VC0429 457418 459982 - hypothetical protein gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=VC0429 VC0430 VC0430 VC0430 460153 461139 - hypothetical protein similar to SP:P12920 PID:144105%3B identified by sequence similarity gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=VC0430 VC0431 VC0431 VC0431 461445 461915 - arginine repressor ArgR regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=VC0431 VC0432 VC0432 VC0432 462243 463178 + malate dehydrogenase oxidizes malate to oxaloacetate gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=VC0432 VC0433 VC0433 VC0433 463652 465058 + arginine/ornithine antiporter similar to GB:U00096 PID:1742644 PID:1742655 PID:1787890%3B identified by sequence similarity gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=VC0433 VC0434 VC0434 VC0434 465207 466178 - octaprenyl-diphosphate synthase similar to SP:P19641 GB:X68873 PID:388220 PID:606125 GB:U00096%3B identified by sequence similarity gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=VC0434 VC0435 VC0435 rplU rplU 466449 466760 + 50S ribosomal protein L21 similar to GB:L42023 SP:P44359 PID:1005961 PID:1220983 PID:1205127%3B identified by sequence similarity gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=VC0435 VC0436 VC0436 rpmA rpmA 466781 467041 + 50S ribosomal protein L27 involved in the peptidyltransferase reaction during translation gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=VC0436 VC0437 VC0437 obgE obgE 467264 468436 + GTPase ObgE essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=VC0437 VC0438 VC0438 VC0438 468450 469319 + hypothetical protein gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=VC0438 VC0439 VC0439 VC0439 469307 469792 + hypothetical protein gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=VC0439 VC0440 VC0440 VC0440 469805 470302 + dihydrofolate reductase similar to SP:P12833 PID:150520%3B identified by sequence similarity gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=VC0440 VC0441 VC0441 apaH apaH 470451 471260 - diadenosine tetraphosphatase 'hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP' gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=VC0441 VC0442 VC0442 apaG apaG 471271 471651 - ApaG protein protein associated with Co2+ and Mg2+ efflux gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=VC0442 VC0443 VC0443 ksgA ksgA 471723 472571 - dimethyladenosine transferase catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=VC0443 VC0444 VC0444 pdxA pdxA 472552 473544 - 4-hydroxythreonine-4-phosphate dehydrogenase catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=VC0444 VC0445 VC0445 VC0445 473534 474829 - survival protein SurA similar to SP:P21202 GB:M68521 PID:147119 PID:216478 GB:U00096%3B identified by sequence similarity gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=VC0445 VC0446 VC0446 VC0446 474882 477245 - organic solvent tolerance protein determines N-hexane tolerance and is involved in outer membrane permeability gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=VC0446 VC0447 VC0447 djlA djlA 477392 478246 + Dna-J like membrane chaperone protein functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=VC0447 VC0449 VC0449 VC0449 479294 480919 - methyl-accepting chemotaxis protein similar to GB:X61367 PID:48195%3B identified by sequence similarity gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=VC0449 VC0450 VC0450 VC0450 481683 482810 - membrane-bound lytic murein transglycosylase C similar to PID:882493 SP:P52066 GB:U00096 PID:1495826 PID:2367180%3B identified by sequence similarity gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=VC0450 VC0451 VC0451 VC0451 482912 483184 - hypothetical protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=VC0451 VC0452 VC0452 VC0452 483198 484259 - A/G-specific adenine glycosylase similar to GB:M59471 SP:P17802 GB:X52391 PID:146864 PID:42073%3B identified by sequence similarity gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=VC0452 VC0453 VC0453 trmB trmB 484499 485218 + tRNA (guanine-N(7)-)-methyltransferase tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=VC0453 VC0454 VC0454 VC0454 485299 486249 + glutaminase catalyzes the formation of glutamate from glutamine gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=VC0454 VC0455 VC0455 VC0455 486470 487645 - coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=VC0455 VC0456 VC0456 VC0456 487639 488241 - deoxyribonucleotide triphosphate pyrophosphatase HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=VC0456 VC0457 VC0457 VC0457 488311 488742 - hypothetical protein gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=VC0457 VC0458 VC0458 VC0458 488788 489078 - hypothetical protein gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=VC0458 VC0459 VC0459 VC0459 489078 489635 - hypothetical protein gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=VC0459 VC0460 VC0460 VC0460 489689 490507 - pyrroline-5-carboxylate reductase catalyzes the formation of L-proline from pyrroline-5-carboxylate gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=VC0460 VC0461 VC0461 VC0461 490560 491270 - hypothetical protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=VC0461 VC0462 VC0462 VC0462 491296 492333 + twitching motility protein PilT similar to SP:P24559 GB:X67095 PID:151490%3B identified by sequence similarity gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=VC0462 VC0463 VC0463 VC0463 492348 493454 + twitching motility protein PilT similar to SP:P24559 GB:X67095 PID:151490%3B identified by sequence similarity gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=VC0463 VC0464 VC0464 VC0464 493566 494369 + LuxR family transcriptional regulator similar to GB:X80506 SP:P45785 PID:516862%3B identified by sequence similarity gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=VC0464 VC0465 VC0465 VC0465 494454 495758 + tyrosyl-tRNA synthetase catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=VC0465 VC0466 VC0466 VC0466 495796 496218 - Holliday junction resolvase-like protein similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=VC0466 VC0467 VC0467 VC0467 496299 496862 - hypothetical protein gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=VC0467 VC0468 VC0468 VC0468 496898 497854 - glutathione synthetase 'catalyzes the second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione' gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=VC0468 VC0469 VC0469 VC0469 497868 498599 - 16S ribosomal RNA methyltransferase RsmE 'in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase' gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=VC0469 VC0470 VC0470 VC0470 498737 499432 - extracellular deoxyribonuclease similar to GB:M16499 SP:P08038 PID:155163%3B identified by sequence similarity gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=VC0470 VC0471 VC0471 VC0471 499560 500048 - hypothetical protein similar to GB:L42023 SP:P44119 PID:1006537 PID:1221298 PID:1205418%3B identified by sequence similarity gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=VC0471 VC0472 VC0472 VC0472 500170 501327 - S-adenosylmethionine synthetase catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=VC0472 VC0473 VC0473 VC0473 501605 503689 + transketolase 'catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase' gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=VC0473 VC0474 VC0474 VC0474 503761 504657 - iron-regulated virulence regulatory protein IrgB similar to GB:M55988 SP:P25543 PID:155189 PID:1763225%3B identified by sequence similarity gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=VC0474 VC0475 VC0475 VC0475 504802 506760 + enterobactin receptor protein IrgA%3B binds ferric enterobactin%3B irgA gene expression is repressed by Fur and induced by the divergently transcribed upstream gene irgB%3B outer membrane protein%3B involved in iron metabolism gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=VC0475 VC0476 VC0476 VC0476 506912 507937 + erythrose 4-phosphate dehydrogenase NAD-dependent%3B catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=VC0476 VC0477 VC0477 pgk pgk 508071 509249 + phosphoglycerate kinase Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=VC0477 VC0478 VC0478 VC0478 509405 510481 + fructose-bisphosphate aldolase 'catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate' gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=VC0478 VC0479 VC0479 VC0479 510669 510764 + hypothetical protein gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=VC0479 VC0480 VC0480 VC0480 510777 511640 + hypothetical protein gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=VC0480 VC0481 VC0481 VC0481 511704 512339 - LysE/YggA family protein similar to SP:P11667 PID:41425 PID:882452 GB:U00096 PID:1789290%3B identified by sequence similarity gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=VC0481 VC0482 VC0482 VC0482 512504 513400 + chromosome replication initiation inhibitor protein specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=VC0482 VC0483 VC0483 VC0483 513480 514196 + hypothetical protein gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=VC0483 VC0485 VC0485 VC0485 514732 516144 - pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=VC0485 VC0486 VC0486 VC0486 516560 517342 + DeoR family transcriptional regulator similar to GB:J02708 SP:P15082 GB:X13463 PID:146282 PID:41630%3B identified by sequence similarity gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=VC0486 VC0487 VC0487 VC0487 517405 519237 + glucosamine--fructose-6-phosphate aminotransferase 'Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source' gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=VC0487 VC0488 VC0488 VC0488 519298 520377 - ABC transporter substrate-binding protein similar to PID:2338765%3B identified by sequence similarity gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=VC0488 VC0489 VC0489 VC0489 520634 522394 - hemolysin similar to PID:1045438%3B identified by sequence similarity gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=VC0489 VC0490 VC0490 VC0490 523156 525117 - hypothetical protein gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=VC0490 VC0491 VC0491 VC0491 525118 525654 - hypothetical protein gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=VC0491 VC0492 VC0492 VC0492 525623 526789 - hypothetical protein gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=VC0492 VC0493 VC0493 VC0493 527045 527920 - hypothetical protein gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=VC0493 VC0494 VC0494 VC0494 528305 528949 + hypothetical protein gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=VC0494 VC0495 VC0495 VC0495 529011 529685 + hypothetical protein gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=VC0495 VC0496 VC0496 VC0496 529739 530338 + hypothetical protein gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=VC0496 VC0497 VC0497 VC0497 530402 530602 + transcriptional regulator similar to SP:P12552 PID:15163 PID:15171%3B identified by sequence similarity gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=VC0497 VC0498 VC0498 VC0498 530684 531124 + ribonuclease H catalyzes the endonucleolytic cleavage to 5'-phosphomonomer gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=VC0498 VC0499 VC0499 VC0499 531205 532035 - 'This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact.' gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=VC0499 VC0500 VC0500 VC0500 532071 532411 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=VC0500 VC0501 VC0501 VC0501 532899 533809 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=VC0501 VC0502 VC0502 VC0502 534198 534722 - type IV pilin similar to SP:P00117%3B identified by sequence similarity gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=VC0502 VC0503 VC0503 VC0503 535418 536698 + hypothetical protein gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=VC0503 VC0504 VC0504 VC0504 536876 537103 - hypothetical protein gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=VC0504 VC0505 VC0505 VC0505 537151 537519 - hypothetical protein gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=VC0505 VC0506 VC0506 VC0506 537550 538284 - hypothetical protein gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=VC0506 VC0507 VC0507 VC0507 538423 538599 - hypothetical protein gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=VC0507 VC0508 VC0508 VC0508 538603 539046 - hypothetical protein gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=VC0508 VC0509 VC0509 VC0509 539097 539540 - hypothetical protein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=VC0509 VC0510 VC0510 VC0510 539531 540004 - DNA repair protein RadC-like protein similar to PID:1208991 GB:U00096 PID:1552815 PID:2367100%3B identified by sequence similarity gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=VC0510 VC0512 VC0512 VC0512 541319 542908 + methyl-accepting chemotaxis protein similar to GB:X61367 PID:48195%3B identified by sequence similarity gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=VC0512 VC0513 VC0513 VC0513 544362 545177 + AraC family transcriptional regulator similar to GB:Y00138 SP:P05052 GB:M24530 PID:41948 PID:145292%3B identified by sequence similarity gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=VC0513 VC0514 VC0514 VC0514 545174 547054 + methyl-accepting chemotaxis protein similar to GB:L25660 GB:U15606 PID:1100874 PID:431739 PID:558482%3B identified by sequence similarity gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=VC0514 VC0515 VC0515 VC0515 547158 548390 + hypothetical protein gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=VC0515 VC0516 VC0516 VC0516 548780 550021 - phage integrase similar to SP:P32053 GB:U03737 PID:216669 PID:433349 PID:1033117%3B identified by sequence similarity gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=VC0516 VC0517 VC0517 VC0517 550407 552284 - RNA polymerase sigma factor RpoD sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=VC0517 VC0518 VC0518 dnaG dnaG 552383 554145 - DNA primase synthesizes RNA primers at the replication forks gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=VC0518 VC0519 VC0519 VC0519 554235 554678 - hypothetical protein gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=VC0519 VC0520 VC0520 rpsU rpsU 554708 554923 - 30S ribosomal protein S21 a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=VC0520 VC0521 VC0521 gcp gcp 555164 556182 + DNA-binding/iron metalloprotein/AP endonuclease 'in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity' gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=VC0521 VC0522 VC0522 VC0522 556336 557148 + beta-ketoadipate enol-lactone hydrolase similar to PID:2239060%3B identified by sequence similarity gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=VC0522 VC0523 VC0523 VC0523 557197 557823 - glycerol-3-phosphate acyltransferase PlsY involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=VC0523 VC0524 VC0524 VC0524 557976 558365 + dihydroneopterin aldolase FolB similar to SP:P31055 PID:882580 GB:U00096 PID:1789438%3B identified by sequence similarity gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=VC0524 VC0525 VC0525 VC0525 558362 558868 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase similar to GB:D26562 SP:P26281 GB:L06495 PID:146013 PID:473801%3B identified by sequence similarity gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=VC0525 VC0526 VC0526 uppP uppP 558865 559668 + UDP pyrophosphate phosphatase BacA%3B phosphatase activity in Escherichia coli not kinase%3B involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=VC0526 VC0527 VC0527 ftsB ftsB 559777 560067 + cell division protein FtsB forms a complex with FtsL and FtsQ%3B colocalizes to the septal region of the dividing cell%3B membrane protein gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=VC0527 VC0528 VC0528 ispD ispD 560064 560762 + 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=VC0528 VC0529 VC0529 ispF ispF 560759 561235 + 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase 'catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate' gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=VC0529 VC0530 VC0530 truD truD 561265 562350 + tRNA pseudouridine synthase D catalyzes the modification of U13 in tRNA(Glu) gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=VC0530 VC0531 VC0531 surE surE 562313 563104 + stationary phase survival protein SurE catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=VC0531 VC0532 VC0532 pcm pcm 563097 563723 + protein-L-isoaspartate O-methyltransferase catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=VC0532 VC0533 VC0533 VC0533 563723 564658 + lipoprotein NlpD similar to GP:2897901%3B identified by sequence similarity gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=VC0533 VC0534 VC0534 VC0534 564732 565739 + RNA polymerase sigma-38 factor similar to GP:2897902%3B identified by sequence similarity gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=VC0534 VC0535 VC0535 VC0535 565832 568420 - DNA mismatch repair protein MutS This protein performs the mismatch recognition step during the DNA repair process gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=VC0535 VC0537 VC0537 cysM cysM 568688 569575 - cysteine synthase B catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=VC0537 VC0538 VC0538 VC0538 569959 570960 + thiosulfate ABC transporter substrate-binding protein similar to GB:M32101 SP:P16700 PID:145658 GB:U00096 PID:1788765%3B identified by sequence similarity gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=VC0538 VC0539 VC0539 VC0539 571037 571888 + sulfate ABC transporter permease similar to GB:M32101 SP:P16701 PID:145659 GB:U00096 PID:1788764%3B identified by sequence similarity gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=VC0539 VC0540 VC0540 VC0540 571899 572762 + sulfate ABC transporter permease similar to GB:M32101 SP:P16702 PID:145660 GB:U00096 PID:1788762%3B identified by sequence similarity gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=VC0540 VC0541 VC0541 VC0541 572759 573889 + sulfate ABC transporter ATP-binding protein similar to GB:M32101 SP:P16676 PID:145661 GB:U00096 PID:1788761%3B identified by sequence similarity gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=VC0541 VC0542 VC0542 VC0542 574056 574562 + CinA-like protein similar to PID:1209307 SP:P51967%3B identified by sequence similarity gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=VC0542 VC0543 VC0543 recA recA 574696 575760 + recombinase A 'catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs' gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=VC0543 VC0544 VC0544 recX recX 575893 576351 + recombination regulator RecX binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=VC0544 VC0545 VC0545 alaS alaS 576524 579106 + alanyl-tRNA synthetase 'Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA' gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=VC0545 VC0547 VC0547 VC0547 579310 580497 + aspartate kinase catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=VC0547 VC0548 VC0548 VC0548 580589 580786 + carbon storage regulator affects carbohydrate metabolism%3B has regulatory role in many processes gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=VC0548 VC0549 VC0549 VC0549 582357 582617 + oxaloacetate decarboxylase subunit gamma gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=VC0549 VC0550 VC0550 VC0550 582646 584439 + oxaloacetate decarboxylase catalyzes the formation of pyruvate from oxaloacetate gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=VC0550 VC0551 VC0551 VC0551 584449 585579 + oxaloacetate decarboxylase subunit beta similar to GB:M96434 SP:Q03031 PID:154198%3B identified by sequence similarity gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=VC0551 VC0552 VC0552 VC0552 585702 586652 + quinone oxidoreductase similar to GP:3293547%3B identified by sequence similarity gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=VC0552 VC0553 VC0553 VC0553 586646 587107 + hypothetical protein gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=VC0553 VC0554 VC0554 VC0554 587114 589972 + insulinase family protease/insulinase family protease similar to GP:2661690%3B identified by sequence similarity gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=VC0554 VC0556 VC0556 VC0556 590084 591658 + glutamate--cysteine ligase involved in the first step of glutathione biosynthesis gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=VC0556 VC0557 VC0557 VC0557 591707 592225 + S-ribosylhomocysteinase catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=VC0557 VC0558 VC0558 VC0558 592295 593575 - hemolysin similar to SP:P37908%3B identified by sequence similarity gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=VC0558 VC0559 VC0559 VC0559 593658 594461 - hypothetical protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=VC0559 VC0560 VC0560 VC0560 594665 596050 + signal recognition particle protein similar to GB:L42023 SP:P44518 PID:1003116 PID:1222019 PID:1204365%3B identified by sequence similarity gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=VC0560 VC0561 VC0561 rpsP rpsP 596286 596534 + 30S ribosomal protein S16 binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=VC0561 VC0562 VC0562 rimM rimM 596562 597116 + 16S rRNA-processing protein RimM Essential for efficient processing of 16S rRNA gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=VC0562 VC0563 VC0563 trmD trmD 597144 597887 + tRNA (guanine-N(1)-)-methyltransferase methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=VC0563 VC0564 VC0564 rplS rplS 597929 598282 + 50S ribosomal protein L19 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=VC0564 VC0565 VC0565 VC0565 598403 599461 - protease DegS similar to SP:P31137 GB:U15661 GB:U00096 PID:1789630%3B identified by sequence similarity gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=VC0565 VC0566 VC0566 VC0566 599638 601008 - protease Do similar to GB:M36536 SP:P09376 GB:M29955 GB:X12457 PID:146414%3B identified by sequence similarity gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=VC0566 VC0567 VC0567 VC0567 601137 601574 - cytochrome d ubiquinol oxidase subunit III gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=VC0567 VC0568 VC0568 VC0568 601728 602831 + hypothetical protein gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=VC0568 VC0570 VC0570 rplM rplM 603055 603483 + 50S ribosomal protein L13 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=VC0570 VC0571 VC0571 rpsI rpsI 603499 603891 + 30S ribosomal protein S9 forms a direct contact with the tRNA during translation gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=VC0571 VC0573 VC0573 VC0573 604219 604812 + ubiquinol--cytochrome c reductase iron-sulfur subunit similar to GP:2642361%3B identified by sequence similarity gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=VC0573 VC0574 VC0574 VC0574 604812 606077 + ubiquinol--cytochrome c reductase cytochrome B similar to GP:2642362%3B identified by sequence similarity gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=VC0574 VC0575 VC0575 VC0575 606074 606811 + ubiquinol--cytochrome c reductase cytochrome c1 similar to GP:2642363%3B identified by sequence similarity gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=VC0575 VC0576 VC0576 sspA sspA 606911 607546 + stringent starvation protein A transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=VC0576 VC0577 VC0577 VC0577 607546 608022 + ClpXP protease specificity-enhancing factor similar to GB:M69028 SP:P25663 GB:X05088 PID:147872 PID:42999%3B identified by sequence similarity gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=VC0577 VC0578 VC0578 VC0578 608090 608659 - hemolysin similar to GB:S57691 SP:P46028 PID:299398%3B identified by sequence similarity gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=VC0578 VC0579 VC0579 VC0579 608662 609252 - phosphoheptose isomerase similar to SP:P45466 PID:606089 GB:U00096 PID:1789539%3B identified by sequence similarity gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=VC0579 VC0580 VC0580 VC0580 609256 609624 - hypothetical protein gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=VC0580 VC0581 VC0581 VC0581 609611 611416 - lipoprotein similar to SP:P45464 PID:606087 GB:U00096 PID:1789537%3B identified by sequence similarity gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=VC0581 VC0582 VC0582 VC0582 611486 612352 + hypothetical protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=VC0582 VC0583 VC0583 VC0583 612566 613176 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=VC0583 VC0585 VC0585 VC0585 613472 614005 + hypoxanthine-guanine phosphoribosyltransferase 'Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine%2C respectively' gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=VC0585 VC0586 VC0586 VC0586 614080 614748 - carbonic anhydrase similar to GB:D26562 SP:P36857 PID:473793 GB:U00096 PID:1786318%3B identified by sequence similarity gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=VC0586 VC0587 VC0587 VC0587 614896 616542 + sulfate permease family protein similar to PID:1001216 PID:1001268%3B identified by sequence similarity gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=VC0587 VC0589 VC0589 VC0589 616926 617843 + ABC transporter ATP-binding protein similar to GB:D26562 SP:P36879 PID:473794 GB:U00096 PID:1786319%3B identified by sequence similarity gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=VC0589 VC0590 VC0590 VC0590 617849 618619 + permease similar to GB:D26562 SP:P36880 PID:473795 GB:U00096 PID:1786320%3B identified by sequence similarity gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=VC0590 VC0591 VC0591 panC panC 618683 619564 - pantoate--beta-alanine ligase catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=VC0591 VC0592 VC0592 panB panB 619575 620369 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 'catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate' gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=VC0592 VC0593 VC0593 VC0593 620372 620875 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase similar to GB:D26562 SP:P26281 GB:L06495 PID:146013 PID:473801%3B identified by sequence similarity gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=VC0593 VC0594 VC0594 VC0594 620872 622245 - poly(A) polymerase similar to SP:P13685 GB:D26562 GB:M20574 GB:S48039 PID:147117%3B identified by sequence similarity gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=VC0594 VC0595 VC0595 VC0595 622336 623250 - glutamyl-Q tRNA(Asp) synthetase 'this tRNA synthetase lacks the tRNA anticodon interaction domain%3B instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4%2C5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp%3B the modified tRNA does not bind elongation factor Tu' gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=VC0595 VC0596 VC0596 VC0596 623299 623745 - dnaK suppressor protein similar to GB:D26562 SP:P18274 GB:M34945 GB:M60726 PID:145751%3B identified by sequence similarity gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=VC0596 VC0597 VC0597 VC0597 623870 624640 - sugar fermentation stimulation protein A Regulatory factor involved in maltose metabolism gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=VC0597 VC0600 VC0600 VC0600 624851 626203 + hypothetical protein gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=VC0600 VC0601 VC0601 VC0601 626302 628764 + ATP-dependent RNA helicase HrpB similar in sequence to the ATP-dependent RNA helicase HrpA gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=VC0601 VC0602 VC0602 VC0602 628761 631094 + penicillin-binding protein 1B similar to GB:D26562 SP:P02919 GB:M12486 GB:X02163 PID:145948%3B identified by sequence similarity gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=VC0602 VC0603 VC0603 VC0603 631331 633625 + hypothetical protein gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=VC0603 VC0604 VC0604 VC0604 633890 636487 + bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=VC0604 VC0605 VC0605 VC0605 636642 637022 + hypothetical protein gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=VC0605 VC0606 VC0606 VC0606 637173 637538 + nitrogen regulatory protein P-II similar to GB:U00096 PID:1788904 PID:1799977%3B identified by sequence similarity gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=VC0606 VC0607 VC0607 VC0607 637554 638788 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=VC0607 VC0608 VC0608 VC0608 638885 639943 + iron(III) ABC transporter substrate-binding protein similar to PID:1651916%3B identified by sequence similarity gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=VC0608 VC0609 VC0609 VC0609 640027 641652 + iron(III) ABC transporter permease similar to PID:1001414 PID:1001407%3B identified by sequence similarity gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=VC0609 VC0610 VC0610 VC0610 641652 642683 + iron(III) ABC transporter ATP-binding protein similar to PID:1653298%3B identified by sequence similarity gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=VC0610 VC0611 VC0611 VC0611 642814 644226 - phosphoglucomutase/phosphomannomutase similar to GB:AE000657%3B identified by sequence similarity gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=VC0611 VC0612 VC0612 VC0612 644349 646754 - cellobiose/cellodextrin-phosphorylase similar to PID:1575345%3B identified by sequence similarity gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=VC0612 VC0613 VC0613 VC0613 646873 648786 - beta-N-acetylhexosaminidase similar to PID:1698442%3B identified by sequence similarity gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=VC0613 VC0614 VC0614 VC0614 648783 649760 - hypothetical protein gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=VC0614 VC0615 VC0615 VC0615 649664 651388 - endoglucanase-like protein similar to PID:1663519%3B identified by sequence similarity gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=VC0615 VC0616 VC0616 VC0616 651445 652440 - peptide ABC transporter ATP-binding protein similar to GB:Pyro_h%3B identified by sequence similarity gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=VC0616 VC0617 VC0617 VC0617 652483 653466 - peptide ABC transporter ATP-binding protein similar to GB:Pyro_h%3B identified by sequence similarity gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=VC0617 VC0618 VC0618 VC0618 653469 654494 - peptide ABC transporter permease similar to GB:Pyro_h%3B identified by sequence similarity gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=VC0618 VC0619 VC0619 VC0619 654497 655483 - peptide ABC transporter permease similar to GB:Pyro_h%3B identified by sequence similarity gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=VC0619 VC0620 VC0620 VC0620 655653 657323 - peptide ABC transporter substrate-binding protein similar to GB:Pyro_h%3B identified by sequence similarity gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=VC0620 VC0622 VC0622 VC0622 658234 661623 - sensory box sensor histidine kinase/response regulator similar to PID:939724%3B identified by sequence similarity gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=VC0622 VC0623 VC0623 VC0623 661831 662853 - hypothetical protein gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=VC0623 VC0624 VC0624 VC0624 662926 664011 - hypothetical protein gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=VC0624 VC0626 VC0626 VC0626 664265 665563 - glutamate-1-semialdehyde aminotransferase Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=VC0626 VC0627 VC0627 VC0627 665847 666188 + iron-sulfur cluster insertion protein ErpA essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=VC0627 VC0628 VC0628 VC0628 666286 667386 + hypothetical protein gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=VC0628 VC0629 VC0629 VC0629 667397 670516 + multidrug resistance protein similar to GB:U00096 PID:1736781 PID:1736784 PID:1788390 GB:U00096%3B identified by sequence similarity gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=VC0629 VC0630 VC0630 VC0630 670598 671899 - hypothetical protein gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=VC0630 VC0631 VC0631 VC0631 672030 673217 + tyrosyl-tRNA synthetase catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=VC0631 VC0632 VC0632 VC0632 673285 674748 - D-alanyl-D-alanine carboxypeptidase/endopeptidase 'penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains' gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=VC0632 VC0633 VC0633 VC0633 674828 675880 - outer membrane protein OmpU similar to PID:1658032%3B identified by sequence similarity gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=VC0633 VC0634 VC0634 greA greA 676405 676881 + transcription elongation factor GreA 'necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus' gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=VC0634 VC0635 VC0635 VC0635 676958 677254 - hypothetical protein gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=VC0635 VC0636 VC0636 rrmJ rrmJ 677374 678003 + 23S rRNA methyltransferase Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=VC0636 VC0637 VC0637 VC0637 678104 680059 + cell division protein FtsH similar to GB:M83138 SP:P28691 GB:U01376 PID:146028 PID:606116%3B identified by sequence similarity gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=VC0637 VC0638 VC0638 VC0638 680126 680962 + dihydropteroate synthase similar to GB:L06494 SP:P26282 GB:U01376 GB:X68776 GB:X68777%3B identified by sequence similarity gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=VC0638 VC0639 VC0639 glmM glmM 680988 682328 + phosphoglucosamine mutase catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=VC0639 VC0640 VC0640 secG secG 682585 682920 + preprotein translocase subunit SecG similar to GB:D16463 SP:P33582 GB:U01376 PID:431135 PID:606113%3B identified by sequence similarity gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=VC0640 VC0641 VC0641 VC0641 683351 683806 + hypothetical protein in Streptococcus pneumoniae this gene was found to be essential%3B structure determination of the Streptococcus protein shows that it is similar to a number of other proteins gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=VC0641 VC0642 VC0642 nusA nusA 683825 685312 + transcription elongation factor NusA 'modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination' gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=VC0642 VC0643 VC0643 infB infB 685337 688033 + translation initiation factor IF-2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=VC0643 VC0644 VC0644 rbfA rbfA 688135 688533 + ribosome-binding factor A associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=VC0644 VC0645 VC0645 truB truB 688533 689471 + tRNA pseudouridine synthase B catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=VC0645 VC0646 VC0646 rpsO rpsO 689613 689882 + 30S ribosomal protein S15 primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=VC0646 VC0647 VC0647 VC0647 690245 692374 + polynucleotide phosphorylase similar to GB:J02638 SP:P05055 GB:M14425 GB:X00761 PID:147749%3B identified by sequence similarity gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=VC0647 VC0648 VC0648 VC0648 692490 693401 + lipoprotein NlpI lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=VC0648 VC0649 VC0649 VC0649 693488 693907 + MarR family transcriptional regulator similar to GB:U03842 SP:P40676 PID:438375%3B identified by sequence similarity gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=VC0649 VC0650 VC0650 vmrA vmrA 693954 695291 + multidrug efflux pump VmrA sodium/drug antiporter%3B functions as a Na(+)-driven Na(+)/drug antiporter%3B member of multidrug and toxic compound extrusion (MATE) family%3B extrudes acriflavines and other compounds by utilizing the sodium gradient gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=VC0650 VC0651 VC0651 VC0651 695344 696222 - hypothetical protein gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=VC0651 VC0652 VC0652 VC0652 696234 697247 - protease similar to SP:P45527 PID:606098 GB:U00096 PID:1789548%3B identified by sequence similarity gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=VC0652 VC0653 VC0653 VC0653 697355 699409 - c-di-GMP phosphodiesterase A-like protein similar to GP:3659618%3B identified by sequence similarity gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=VC0653 VC0654 VC0654 VC0654 699642 700169 + hypothetical protein gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=VC0654 VC0655 VC0655 VC0655 700105 700656 + acetyltransferase similar to SP:P45473 PID:606096 GB:U00096 PID:1789546%3B identified by sequence similarity gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=VC0655 VC0656 VC0656 VC0656 700767 701174 + DNA polymerase III subunit psi with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=VC0656 VC0657 VC0657 VC0657 701135 701620 + ribosomal-protein-alanine acetyltransferase similar to GB:L42023 SP:P44305 PID:1004120 PID:1221913 PID:1204268%3B identified by sequence similarity gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=VC0657 VC0658 VC0658 VC0658 701609 703666 - c-di-GMP phosphodiesterase A-like protein similar to GP:3659614%3B identified by sequence similarity gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=VC0658 VC0659 VC0659 prfC prfC 703870 705465 + peptide chain release factor 3 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=VC0659 VC0660 VC0660 VC0660 705587 706858 - ATP-dependent RNA helicase SrmB facilitates an early step in the assembly of the 50S subunit of the ribosome gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=VC0660 VC0661 VC0661 VC0661 706946 707668 - hypothetical protein gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=VC0661 VC0662 VC0662 VC0662 707977 709290 + branched-chain amino acid ABC transporter substrate-binding protein similar to SP:P19072 GB:X51634 PID:45302%3B identified by sequence similarity gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=VC0662 VC0663 VC0663 prfB prfB 709460 710558 + peptide chain release factor 2 gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=VC0663 VC0664 VC0664 lysS lysS 710583 712121 + lysyl-tRNA synthetase 'class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1' gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=VC0664 VC0665 VC0665 VC0665 712395 713729 + Fis family transcriptional regulator similar to GP:3236438%3B identified by sequence similarity gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=VC0665 VC0666 VC0666 VC0666 714307 714558 + hypothetical protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=VC0666 VC0667 VC0667 VC0667 714596 715654 - aldo/keto reductase similar to PID:882727 GB:U00096 PID:1789199 PID:2342573%3B identified by sequence similarity gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=VC0667 VC0668 VC0668 VC0668 715847 716512 - DNA mismatch repair protein MutH%3B Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=VC0668 VC0671 VC0671 VC0671 717080 717661 + dinucleoside polyphosphate hydrolase hydrolyzes diadenosine polyphosphate gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=VC0671 VC0672 VC0672 VC0672 717664 719910 + fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=VC0672 VC0673 VC0673 VC0673 719920 720714 + hypothetical protein gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=VC0673 VC0674 VC0674 VC0674 720743 721558 + prolipoprotein diacylglyceryl transferase transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=VC0674 VC0675 VC0675 thyA thyA 721568 722419 + thymidylate synthase 'ThyA%3B catalyzes formation of dTMP and 7%2C8-dihydrofolate from 5%2C10-methylenetetrahydrofolate and dUMP%3B involved in deoxyribonucleotide biosynthesis%3B there are 2 copies in some Bacilli%2C one of which appears to be phage-derived' gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=VC0675 VC0676 VC0676 VC0676 722512 723660 - Na+/phosphate symporter NptA similar to GP:3646477%3B identified by sequence similarity gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=VC0676 VC0677 VC0677 nhaR nhaR 724055 724945 + transcriptional activator NhaR Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=VC0677 VC0678 VC0678 VC0678 725144 725470 + transcriptional activator HlyU similar to GB:X66866 PID:403332 SP:P52695%3B identified by sequence similarity gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=VC0678 VC0679 VC0679 rpsT rpsT 725539 725799 - 30S ribosomal protein S20 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=VC0679 VC0680 VC0680 VC0680 726042 727619 + MviN protein similar to GP:2631999%3B identified by sequence similarity gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=VC0680 VC0681 VC0681 ribC ribC 727688 728656 + bifunctional riboflavin kinase/FMN adenylyltransferase catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN%3B in Bacillus the ribC gene has both flavokinase and FAD synthetase activities gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=VC0681 VC0682 VC0682 ileS ileS 728687 731536 + isoleucyl-tRNA synthetase 'IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme' gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=VC0682 VC0683 VC0683 lspA lspA 731552 732067 + lipoprotein signal peptidase lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=VC0683 VC0684 VC0684 VC0684 732230 732664 + FKBP-type peptidylprolyl isomerase similar to GB:D10483 SP:P22563 GB:X54945 PID:216455 PID:41932%3B identified by sequence similarity gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=VC0684 VC0685 VC0685 ispH ispH 732711 733661 + 4-hydroxy-3-methylbut-2-enyl diphosphate reductase catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=VC0685 VC0687 VC0687 VC0687 733798 735282 - carbon starvation protein A similar to GP:3212213%3B identified by sequence similarity gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=VC0687 VC0688 VC0688 VC0688 735535 735876 + hypothetical protein gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=VC0688 VC0689 VC0689 VC0689 735892 737691 + hypothetical protein gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=VC0689 VC0690 VC0690 VC0690 737715 738638 - N-acetylmuramic acid-6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=VC0690 VC0691 VC0691 anmK anmK 738656 739768 - anhydro-N-acetylmuramic acid kinase 'catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling' gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=VC0691 VC0692 VC0692 VC0692 739874 740866 + beta-hexosaminidase hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=VC0692 VC0693 VC0693 VC0693 740893 741606 - two-component response-regulatory protein YehT unknown function%3B when overproduced it confers drug-resistance gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=VC0693 VC0694 VC0694 VC0694 741616 743292 - hypothetical protein gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=VC0694 VC0695 VC0695 VC0695 743534 744607 + phospho-2-dehydro-3-deoxyheptonate aldolase 'catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive' gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=VC0695 VC0696 VC0696 tyrA tyrA 744620 745747 + bifunctional chorismate mutase/prephenate dehydrogenase catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=VC0696 VC0697 VC0697 VC0697 745814 746245 - hypothetical protein gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=VC0697 VC0698 VC0698 VC0698 746356 748023 - ABC transporter ATP-binding protein 'ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence' gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=VC0698 VC0700 VC0700 VC0700 748385 750331 + soluble lytic murein transglycosylase similar to GB:U14003 SP:P03810 GB:M69185 PID:147836 PID:537232%3B identified by sequence similarity gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=VC0700 VC0701 VC0701 VC0701 750341 750697 + Trp operon repressor When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=VC0701 VC0702 VC0702 yjjX yjjX 750775 751326 - NTPase pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=VC0702 VC0703 VC0703 VC0703 751247 753622 - c-di-GMP phosphodiesterase A-like protein similar to GP:3659618%3B identified by sequence similarity gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=VC0703 VC0704 VC0704 VC0704 753606 754685 - spermidine/putrescine ABC transporter substrate-binding protein similar to GB:M93239 SP:P31133 PID:147334 GB:U00096 PID:1651387%3B identified by sequence similarity gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=VC0704 VC0705 VC0705 VC0705 754828 756003 - chorismate mutase similar to GB:L42023 SP:P43900 PID:1006481 PID:1221267 PID:1205390%3B identified by sequence similarity gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=VC0705 VC0706 VC0706 VC0706 756243 756569 - sigma-54 modulation protein similar to SP:P11285 PID:147173 PID:147179 PID:1246515 GB:U00096%3B identified by sequence similarity gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=VC0706 VC0708 VC0708 VC0708 756971 757732 - hypothetical protein gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=VC0708 VC0709 VC0709 rluD rluD 757851 758825 + 23S rRNA pseudouridine synthase D 'responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA' gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=VC0709 VC0710 VC0710 VC0710 758828 759550 + hypothetical protein gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=VC0710 VC0711 VC0711 VC0711 759675 762248 + clpB protein similar to GB:M29364 SP:P03815 GB:V00350 GB:X57620 PID:1236633%3B identified by sequence similarity gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=VC0711 VC0713 VC0713 VC0713 762602 762799 + hypothetical protein gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=VC0713 VC0714 VC0714 VC0714 768218 768541 + hypothetical protein gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=VC0714 VC0715 VC0715 VC0715 768551 769273 + nitroreductase A NADPH-dependent%3B oxygen-insensitive%3B catalyzes the reduction of nitroaromatic compounds gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=VC0715 VC0716 VC0716 VC0716 769308 769562 - ferredoxin similar to GB:L42023 PID:1003938 PID:1222462 PID:1204778 SP:P44746%3B identified by sequence similarity gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=VC0716 VC0717 VC0717 VC0717 769565 770965 - protease similar to GB:U00096 SP:P76403 PID:1736789 PID:1736801 PID:1788397%3B identified by sequence similarity gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=VC0717 VC0718 VC0718 rdgC rdgC 771116 772030 - recombination associated protein Required for efficient pilin antigenic variation gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=VC0718 VC0719 VC0719 VC0719 772267 772956 + DNA-binding response regulator PhoB similar to GP:3282774%3B identified by sequence similarity gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=VC0719 VC0720 VC0720 phoR phoR 772978 774279 + phosphate regulon sensor protein membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=VC0720 VC0721 VC0721 VC0721 774276 775253 + phosphate ABC transporter substrate-binding protein similar to GB:AE000782%3B identified by sequence similarity gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=VC0721 VC0722 VC0722 VC0722 775321 776892 - exopolyphosphatase similar to GP:3452466%3B identified by sequence similarity gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=VC0722 VC0723 VC0723 VC0723 776804 778909 - polyphosphate kinase catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=VC0723 VC0724 VC0724 VC0724 779108 781303 + phosphate ABC transporter permease similar to PID:633992%3B identified by sequence similarity gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=VC0724 VC0725 VC0725 VC0725 781313 782959 + phosphate ABC transporter permease similar to PID:633994 PID:1369911%3B identified by sequence similarity gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=VC0725 VC0726 VC0726 VC0726 782962 783783 + phosphate transporter ATP-binding protein ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=VC0726 VC0727 VC0727 VC0727 783817 784527 + transcriptional regulator PhoU regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=VC0727 VC0728 VC0728 VC0728 784588 785364 - hypothetical protein gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=VC0728 VC0730 VC0730 VC0730 785567 786331 - copper homeostasis protein similar to GP:1736520%3B identified by sequence similarity gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=VC0730 VC0731 VC0731 VC0731 786666 787289 - anti-oxidant AhpCTSA family protein similar to PID:965473%3B identified by sequence similarity gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=VC0731 VC0732 VC0732 VC0732 787493 788398 + LysR family transcriptional regulator similar to PID:887385 SP:P52667 PID:1359475%3B identified by sequence similarity gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=VC0732 VC0734 VC0734 VC0734 788949 790619 + malate synthase Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=VC0734 VC0736 VC0736 VC0736 790749 792062 + isocitrate lyase 'Catalyzes the first step in the glyoxalate cycle%2C which converts lipids to carbohydrates' gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=VC0736 VC0737 VC0737 VC0737 792215 792724 - acetoin utilization protein AcuB similar to GB:L17309 SP:P39066 PID:348051 PID:2293317 GB:AL009126%3B identified by sequence similarity gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=VC0737 VC0739 VC0739 queA queA 792954 794012 + S-adenosylmethionine:tRNA ribosyltransferase-isomerase Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=VC0739 VC0741 VC0741 tgt tgt 794241 795380 + queuine tRNA-ribosyltransferase 'Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr)' gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=VC0741 VC0742 VC0742 yajC yajC 795485 795817 + preprotein translocase subunit YajC member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=VC0742 VC0743 VC0743 secD secD 795839 797692 + preprotein translocase subunit SecD 'part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane' gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=VC0743 VC0744 VC0744 secF secF 797707 798654 + preprotein translocase subunit SecF 'forms a complex with SecD and YajC%3B SecDFyajC stimulates the proton motive force-driven protein translocation%3B seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane%3B in some organisms%2C such as Bacillus subtilis%2C SecD is fused to SecF' gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=VC0744 VC0745 VC0745 VC0745 798822 799625 - inositol monophosphatase similar to GB:M34828 SP:P22783 PID:147899 GB:U00096 PID:1788882%3B identified by sequence similarity gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=VC0745 VC0746 VC0746 VC0746 799804 800538 + RNA methyltransferase similar to GB:U00096 PID:1788881%3B identified by sequence similarity gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=VC0746 VC0747 VC0747 VC0747 800608 801174 + hypothetical protein gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=VC0747 VC0748 VC0748 VC0748 801201 802415 + cysteine desulfurase catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=VC0748 VC0749 VC0749 VC0749 802452 802835 + scaffold protein similar to GB:U00096 PID:1788878 PID:1799937%3B identified by sequence similarity gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=VC0749 VC0750 VC0750 VC0750 802896 803219 + HesB family protein similar to GB:L42023 SP:P44672 PID:1003636 PID:1222301 PID:1204624%3B identified by sequence similarity gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=VC0750 VC0751 VC0751 hscB hscB 803268 803783 + co-chaperone HscB J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=VC0751 VC0752 VC0752 hscA hscA 803807 805657 + chaperone protein HscA involved in the maturation of iron-sulfur cluster-containing proteins gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=VC0752 VC0753 VC0753 VC0753 805671 806009 + ferredoxin similar to GB:M88654 SP:P25528 PID:145915 GB:U00096 PID:1788874%3B identified by sequence similarity gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=VC0753 VC0754 VC0754 VC0754 806058 806252 + hypothetical protein gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=VC0754 VC0755 VC0755 VC0755 806472 807761 + aminopeptidase catalyzes the removal of an N-terminal amino acid from a peptide or arylamide gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=VC0755 VC0756 VC0756 ndk ndk 807964 808392 + nucleoside diphosphate kinase catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=VC0756 VC0757 VC0757 VC0757 808566 809687 + ribosomal RNA large subunit methyltransferase N 23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=VC0757 VC0758 VC0758 VC0758 810001 811083 + hypothetical protein gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=VC0758 VC0759 VC0759 ispG ispG 811088 812218 + 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 'catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis' gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=VC0759 VC0760 VC0760 hisS hisS 812244 813512 + histidyl-tRNA synthetase 'catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG' gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=VC0760 VC0761 VC0761 VC0761 813549 814163 + hypothetical protein gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=VC0761 VC0762 VC0762 VC0762 814176 815336 + outer membrane protein assembly complex subunit YfgL 'with YaeT%2C YfiO%2C and NlpB forms a complex involved in outer membrane protein biogenesis' gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=VC0762 VC0763 VC0763 engA engA 815529 817013 + GTP-binding protein EngA EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=VC0763 VC0764 VC0764 VC0764 817034 817951 + hypothetical protein gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=VC0764 VC0765 VC0765 VC0765 818256 818489 + hypothetical protein gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=VC0765 VC0766 VC0766 xseA xseA 818470 819810 - exodeoxyribonuclease VII large subunit bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=VC0766 VC0767 VC0767 VC0767 820012 821481 + inosine 5'-monophosphate dehydrogenase catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=VC0767 VC0768 VC0768 guaA guaA 821588 823141 + GMP synthase contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=VC0768 VC0769 VC0769 VC0769 823377 825101 + chitinase similar to SP:P08252 PID:19861 PID:19863 PID:512387%3B identified by sequence similarity gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=VC0769 VC0770 VC0770 VC0770 825292 825885 + hypothetical protein gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=VC0770 VC0771 VC0771 VC0771 826197 827078 + vibriobactin-specific isochorismatase similar to PID:2182764%3B identified by sequence similarity gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=VC0771 VC0772 VC0772 VC0772 827179 828810 - vibriobactin-specific 2%2C3-dihydroxybenzoate-AMP ligase similar to PID:2182765%3B identified by sequence similarity gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=VC0772 VC0773 VC0773 VC0773 828821 830008 - vibriobactin-specific isochorismate synthase similar to PID:2182763%3B identified by sequence similarity gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=VC0773 VC0774 VC0774 VC0774 830176 830964 + 2%2C3-dihydroxybenzoate-2%2C3-dehydrogenase 'catalyzes the formation of 2%2C3-dihydroxybenzoate from 2%2C3-dihydro-2%2C3-dihydroxybenzoate%3B involved in the biosynthesis of siderophores%2C enterobactin%2C bacillibactin or vibriobactin' gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=VC0774 VC0775 VC0775 VC0775 830976 832292 - vibriobactin synthesis protein similar to GB:M60177 SP:P11454 GB:M17354 PID:145843 PID:551801%3B identified by sequence similarity gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=VC0775 VC0776 VC0776 VC0776 832470 833447 + iron-enterobactin transporter substrate-binding protein with FepCDG is involved in the transport of ferric enterobactin gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=VC0776 VC0777 VC0777 VC0777 833444 834496 + ferric vibriobactin ABC transporter permease similar to SP:P23876 GB:U15411 GB:X57471 GB:X59402 PID:41430%3B identified by sequence similarity gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=VC0777 VC0778 VC0778 VC0778 834475 835551 + ferric vibriobactin ABC transporter permease similar to SP:P23877 GB:X57471 PID:41431 GB:U00096 PID:1778505%3B identified by sequence similarity gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=VC0778 VC0779 VC0779 VC0779 835668 836507 + ferric vibriobactin ABC transporter ATP-binding protein similar to SP:P23878 GB:X57471 PID:41432 GB:U00096 PID:1778504%3B identified by sequence similarity gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=VC0779 VC0780 VC0780 VC0780 836438 837223 + vibriobactin synthase component D similar to SP:P19925 GB:U00096 PID:1651241 PID:1778499 PID:1786797%3B identified by sequence similarity gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=VC0780 VC0781 VC0781 VC0781 837233 838159 + LysR family transcriptional regulator similar to GB:D10483 SP:P10151 GB:M21150 PID:1128961 PID:146605%3B identified by sequence similarity gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=VC0781 VC0783 VC0783 VC0783 838377 840359 + hypothetical protein gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=VC0783 VC0784 VC0784 VC0784 840439 841989 - sodium/alanine symporter similar to GB:AL009126%3B identified by sequence similarity gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=VC0784 VC0786 VC0786 VC0786 842367 843632 - D-amino acid dehydrogenase small subunit catalyzes the oxidative deamination of D-amino acids gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=VC0786 VC0787 VC0787 VC0787 843733 844665 + LysR family transcriptional regulator similar to SP:P46068 PID:1050466 GB:U00096 PID:1788706 PID:1799763%3B identified by sequence similarity gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=VC0787 VC0788 VC0788 VC0788 844790 845119 + DOPA-dioxygenase-like protein similar to PID:2072624%3B identified by sequence similarity gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=VC0788 VC0789 VC0789 VC0789 845285 845557 + hypothetical protein gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=VC0789 VC0790 VC0790 VC0790 845591 846274 - transcriptional regulator CitB similar to PID:912578%3B identified by sequence similarity gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=VC0790 VC0791 VC0791 VC0791 846288 847985 - sensor kinase citA similar to PID:924991 SP:P52687%3B identified by sequence similarity gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=VC0791 VC0792 VC0792 VC0792 848056 849357 - oxaloacetate decarboxylase subunit beta similar to GB:M96434 SP:Q03031 PID:154198%3B identified by sequence similarity gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=VC0792 VC0793m VC0793m oadA-2 oadA-2 849373 851171 - oxaloacetate decarboxylase catalyzes the formation of pyruvate from oxaloacetate gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=VC0793m VC0794 VC0794 VC0794 851190 851609 - hypothetical protein gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=VC0794 VC0795 VC0795 VC0795 851557 852903 - citrate/sodium symporter similar to GB:M83146 SP:P31602 GB:X12599 GB:Y00525 PID:149181%3B identified by sequence similarity gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=VC0795 VC0796 VC0796 VC0796 853165 854235 + citrate (pro-3S)-lyase ligase similar to GB:X79817 SP:P45410 PID:565616%3B identified by sequence similarity gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=VC0796 VC0797 VC0797 VC0797 854287 854583 + citrate lyase subunit gamma acyl carrier protein%3B with CitE and CitF catalyzes the formation of oxaloacetate from citrate gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=VC0797 VC0798 VC0798 VC0798 854565 855455 + citrate lyase subunit beta similar to GB:L42023 SP:P44460 PID:1004146 PID:1221927 PID:1204281%3B identified by sequence similarity gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=VC0798 VC0799 VC0799 VC0799 855466 856995 + citrate lyase subunit alpha similar to GB:X79817 SP:P45413 PID:565619%3B identified by sequence similarity gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=VC0799 VC0800 VC0800 VC0800 856992 857528 + apo-citrate lyase phosphoribosyl-dephospho-CoA transferase similar to GB:U00096 PID:1778531 PID:1786831%3B identified by sequence similarity gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=VC0800 VC0801 VC0801 VC0801 857506 858447 + 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase similar to GB:X79817 SP:P45414 PID:565620%3B identified by sequence similarity gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=VC0801 VC0802 VC0802 VC0802 858794 859192 + hypothetical protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=VC0802 VC0803 VC0803 VC0803 859267 860040 + RNA methyltransferase similar to GB:AL009126%3B identified by sequence similarity gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=VC0803 VC0804 VC0804 VC0804 860219 860542 - ferredoxin similar to SP:P08811%3B identified by sequence similarity gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=VC0804 VC0806 VC0806 VC0806 860789 862405 + hypothetical protein gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=VC0806 VC0807 VC0807 VC0807 862473 863156 - hypothetical protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=VC0807 VC0808 VC0808 VC0808 863128 863280 - hypothetical protein gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=VC0808 VC0809 VC0809 VC0809 863289 865058 + hypothetical protein gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=VC0809 VC0810 VC0810 VC0810 865250 865765 + hypothetical protein gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=VC0810 VC0811 VC0811 VC0811 865899 866803 - gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=VC0811 VC0812 VC0812 VC0812 866873 869812 - helicase-like protein similar to PID:914990%3B identified by sequence similarity gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=VC0812 VC0813 VC0813 VC0813 869813 870391 - tellurite resistance protein-like protein similar to GB:M74072 SP:P25397 PID:149018 GB:U00096 PID:1742337%3B identified by sequence similarity gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=VC0813 VC0814 VC0814 VC0814 870819 871298 - transcriptional regulator similar to GB:X76192 SP:P43640 PID:431929%3B identified by sequence similarity gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=VC0814 VC0815 VC0815 VC0815 871283 872653 - hypothetical protein gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=VC0815 VC0816 VC0816 VC0816 872764 872946 - hypothetical protein gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=VC0816 VC0817 VC0817 VC0817 873242 874225 + transposase similar to GP:3004924%3B identified by sequence similarity gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=VC0817 VC0818 VC0818 VC0818 874251 874931 - 'This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact.' gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=VC0818 VC0819 VC0819 VC0819 875273 876712 - aldehyde dehydrogenase similar to GB:M60658 SP:P23240 PID:155276%3B identified by sequence similarity gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=VC0819 VC0820 VC0820 VC0820 876974 880015 + ToxR-activated gene A protein similar to GP:3004926%3B identified by sequence similarity gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=VC0820 VC0821 VC0821 VC0821 880128 884728 + gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=VC0821 VC0823 VC0823 VC0823 884725 885663 + hypothetical protein gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=VC0823 VC0824 VC0824 tpx tpx 885773 886267 + thiol peroxidase antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=VC0824 VC0825 VC0825 VC0825 886543 888405 - toxin co-regulated pilus biosynthesis protein I similar to GB:L25659 SP:P29486 GB:X64098 PID:398397 PID:409772%3B identified by sequence similarity gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=VC0825 VC0826 VC0826 VC0826 888846 889511 + toxin co-regulated pilus biosynthesis protein P similar to GB:X74730 PID:398398%3B identified by sequence similarity gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=VC0826 VC0827 VC0827 VC0827 889496 889906 + toxin co-regulated pilus biosynthesis protein H similar to GB:X74730 PID:398399%3B identified by sequence similarity gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=VC0827 VC0828 VC0828 VC0828 890449 891123 + toxin co-regulated pilin similar to GB:U09807 PID:398400 PID:497318%3B identified by sequence similarity gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=VC0828 VC0829 VC0829 VC0829 891203 892495 + toxin co-regulated pilus biosynthesis protein B similar to SP:P23476 GB:X64098 PID:398401 PID:48409%3B identified by sequence similarity gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=VC0829 VC0830 VC0830 VC0830 892495 892947 + toxin co-regulated pilus biosynthesis protein Q similar to GB:X74730 PID:398402%3B identified by sequence similarity gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=VC0830 VC0831 VC0831 VC0831 892950 894419 + toxin co-regulated pilus biosynthesis outer membrane protein C similar to SP:P29481 GB:X64098 PID:48411%3B identified by sequence similarity gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=VC0831 VC0832 VC0832 VC0832 894412 894867 + toxin co-regulated pilus biosynthesis protein R similar to SP:P29483 GB:X64098 PID:48412%3B identified by sequence similarity gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=VC0832 VC0833 VC0833 VC0833 894855 895691 + toxin co-regulated pilus biosynthesis protein D similar to SP:P29491 GB:X64098 PID:48413%3B identified by sequence similarity gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=VC0833 VC0834 VC0834 VC0834 895707 896165 + toxin co-regulated pilus biosynthesis protein S similar to SP:P29484 PID:48414%3B identified by sequence similarity gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=VC0834 VC0835 VC0835 VC0835 896155 897666 + toxin co-regulated pilus biosynthesis protein T similar to SP:P29480 PID:48415%3B identified by sequence similarity gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=VC0835 VC0836 VC0836 VC0836 897641 898663 + toxin co-regulated pilus biosynthesis protein E similar to SP:P29487 PID:155280 PID:48416%3B identified by sequence similarity gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=VC0836 VC0837 VC0837 VC0837 898673 899689 + toxin co-regulated pilus biosynthesis protein F similar to SP:P29488 GB:L01623 PID:155281 PID:155284 PID:48417%3B identified by sequence similarity gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=VC0837 VC0838 VC0838 VC0838 899896 900726 + TCP pilus virulence regulatory protein similar to SP:P29492 GB:L01623 PID:155285 PID:48418%3B identified by sequence similarity gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=VC0838 VC0839 VC0839 VC0839 900726 901487 + leader peptidase TcpJ similar to GB:L25661 SP:P27717 GB:M74708 PID:155289 PID:431741%3B identified by sequence similarity gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=VC0839 VC0840 VC0840 VC0840 901494 903374 + accessory colonization factor AcfB similar to GB:L25660 GB:U15606 PID:1100874 PID:431739 PID:558482%3B identified by sequence similarity gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=VC0840 VC0841 VC0841 VC0841 903380 904150 + accessory colonization factor AcfC similar to GB:U15606 PID:1100874 PID:1100875 PID:558481%3B identified by sequence similarity gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=VC0841 VC0842 VC0842 VC0842 904166 904639 + hypothetical protein gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=VC0842 VC0843 VC0843 VC0843 904648 905556 + TagE protein similar to GB:U07173 PID:460955 PID:1100877%3B identified by sequence similarity gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=VC0843 VC0844 VC0844 VC0844 905559 906206 - accessory colonization factor AcfA similar to GB:L29060 PID:456440 PID:1100878%3B identified by sequence similarity gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=VC0844 VC0845 VC0845 VC0845 906379 910941 + hypothetical protein gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=VC0845 VC0846 VC0846 VC0846 911517 912207 - 'This region contains a gene with one or more premature stops or frameshifts%2C and is not the result of a sequencing artifact.' gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=VC0846 VC0847 VC0847 VC0847 912856 914124 - phage family integrase similar to GB:U02372 PID:498253 PID:1100883%3B identified by sequence similarity gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=VC0847 VC0848 VC0848 smpB smpB 914726 915211 - SsrA-binding protein binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=VC0848 VC0849 VC0849 VC0849 915389 915829 + hypothetical protein gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=VC0849 VC0850 VC0850 VC0850 915826 916137 + hypothetical protein gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=VC0850 VC0851 VC0851 VC0851 916215 916625 - small protein A similar to PID:1100874 SP:P52117 PID:1100887%3B identified by sequence similarity gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=VC0851 VC0852 VC0852 VC0852 916733 918397 - recombination and repair protein similar to SP:P05824 GB:Y00357 PID:42693 PID:1033112 GB:U00096%3B identified by sequence similarity gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=VC0852 VC0853 VC0853 ppnK ppnK 918527 919411 - inorganic polyphosphate/ATP-NAD kinase catalyzes the phosphorylation of NAD to NADP gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=VC0853 VC0854 VC0854 VC0854 919557 920159 + heat shock protein GrpE with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=VC0854 VC0855 VC0855 dnaK dnaK 920423 922330 + molecular chaperone DnaK heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=VC0855 VC0856 VC0856 VC0856 922531 923676 + molecular chaperone DnaJ 'chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion' gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=VC0856 VC0857 VC0857 VC0857 923726 924169 - fimbrial assembly protein PilE similar to GB:U02552 PID:1246304 PID:435924%3B identified by sequence similarity gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=VC0857 VC0858 VC0858 VC0858 924224 924778 + type IV pilin similar to PID:1161221%3B identified by sequence similarity gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=VC0858 VC0859 VC0859 VC0859 924747 925349 + hypothetical protein gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=VC0859 VC0860 VC0860 VC0860 925340 926581 + hypothetical protein gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=VC0860 VC0861 VC0861 VC0861 926571 926984 + type IV pilin similar to PID:1161222 PID:1246299 PID:643582%3B identified by sequence similarity gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=VC0861 VC0862 VC0862 VC0862 927021 927389 + hypothetical protein gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=VC0862 VC0863 VC0863 VC0863 927382 928941 + hypothetical protein gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=VC0863 VC0864 VC0864 VC0864 929010 929591 + hypothetical protein similar to GB:L42023 SP:P44931 PID:1006013 PID:1221010 PID:1205153%3B identified by sequence similarity gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=VC0864 VC0866 VC0866 VC0866 929947 931539 - transglycosylase 'YfhD%3B uncharacterized member of the transglycosylase slt family%3B part of the rob operon%2C which plays a role in cellular resistance to antibiotics%2C bactericidal agents%2C and organic solvents%3B unknown function' gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=VC0866 VC0868 VC0868 VC0868 931640 931852 + hypothetical protein gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=VC0868 VC0869 VC0869 VC0869 931849 935742 + phosphoribosylformylglycinamidine synthase catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=VC0869 VC0870 VC0870 VC0870 935917 936354 + IS1004 transposase similar to PID:1054866 PID:2271024%3B identified by sequence similarity gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=VC0870 VC0871 VC0871 VC0871 936465 936656 - hypothetical protein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=VC0871 VC0872 VC0872 VC0872 936662 936865 - hypothetical protein gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=VC0872 VC0873 VC0873 VC0873 936968 937612 - hypothetical protein gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=VC0873 VC0875 VC0875 VC0875 937854 939569 - prolyl-tRNA synthetase catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=VC0875 VC0876 VC0876 VC0876 939795 940490 - hypothetical protein gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=VC0876 VC0878 VC0878 rpmE2 rpmE2 940625 940882 + 50S ribosomal protein L31 'RpmE2%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster do not have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome' gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=VC0878 VC0879 VC0879 rpmJ rpmJ 940879 941004 + 50S ribosomal protein L36 smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=VC0879 VC0880 VC0880 VC0880 941187 942791 + hypothetical protein gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=VC0880 VC0881 VC0881 VC0881 942857 943306 - hypothetical protein gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=VC0881 VC0882 VC0882 VC0882 943303 943602 - hypothetical protein gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=VC0882 VC0884 VC0884 VC0884 944367 944990 + acetyltransferase-like protein similar to SP:P05332 GB:X07542 PID:39573%3B identified by sequence similarity gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=VC0884 VC0885 VC0885 VC0885 944947 945249 - hypothetical protein gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=VC0885 VC0886 VC0886 VC0886 945253 946290 - hypothetical protein gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=VC0886 VC0887 VC0887 VC0887 946379 946690 + hypothetical protein gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=VC0887 VC0888 VC0888 VC0888 946691 947425 + tRNA pseudouridine synthase C catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=VC0888 VC0889 VC0889 VC0889 947523 949403 - 1-deoxy-D-xylulose-5-phosphate synthase catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=VC0889 VC0890 VC0890 VC0890 949423 950307 - geranyltranstransferase similar to GB:D00694 SP:P22939 PID:216584 GB:U00096 PID:1773105%3B identified by sequence similarity gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=VC0890 VC0891 VC0891 VC0891 950349 950591 - exodeoxyribonuclease VII small subunit catalyzes the bidirectional exonucleolytic cleavage of DNA gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=VC0891 VC0892 VC0892 VC0892 950906 951670 + flagellar motor protein PomA Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=VC0892 VC0893 VC0893 motB motB 951682 952638 + flagellar motor protein MotB with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine%3B Vibrio parahaemolyticus protein is associated with the polar flagella gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=VC0893 VC0894 VC0894 VC0894 952942 954393 + thiamine biosynthesis protein ThiI Required for the synthesis of the thiazole moiety gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=VC0894 VC0896 VC0896 VC0896 955014 955934 + DNA-binding transcriptional activator GcvA Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=VC0896 VC0897 VC0897 VC0897 955956 956342 + hypothetical protein gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=VC0897 VC0898 VC0898 xni xni 956372 957223 - exonuclease IX has 3'-5' exonuclease activity that preferentially acts on ssDNA%3B also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites%3B can remove 3' phosphoglycolate groups gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=VC0898 VC0899 VC0899 VC0899 957262 958635 - hypothetical protein gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=VC0899 VC0900 VC0900 VC0900 958840 960414 - GGDEF family protein similar to PID:1652841%3B identified by sequence similarity gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=VC0900 VC0901 VC0901 VC0901 960516 962777 - hypothetical protein gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=VC0901 VC0902 VC0902 queF queF 962792 963637 - 7-cyano-7-deazaguanine reductase catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=VC0902 VC0903 VC0903 VC0903 963686 964282 + SecY interacting protein Syd SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=VC0903 VC0904 VC0904 VC0904 964284 965060 + hypothetical protein gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=VC0904 VC0905 VC0905 metQ metQ 965193 966002 - DL-methionine transporter substrate-binding subunit similar to GB:D15061 SP:P28635 GB:L04474 PID:1208964 PID:303560%3B identified by sequence similarity gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=VC0905 VC0906 VC0906 VC0906 966039 966716 - ABC transporter permease similar to SP:P31547 PID:1208965 PID:303561 GB:U00096 PID:1552774%3B identified by sequence similarity gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=VC0906 VC0907 VC0907 metN metN 966706 967740 - DL-methionine transporter ATP-binding subunit part of the metNIQ transport system for methionine gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=VC0907 VC0908 VC0908 VC0908 967976 968536 + D%2CD-heptose 1%2C7-bisphosphate phosphatase 'Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate' gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=VC0908 VC0909 VC0909 treR treR 968601 969551 + trehalose repressor regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=VC0909 VC0910 VC0910 VC0910 969788 971224 + PTS system trehalose(maltose)-specific transporter subunits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=VC0910 VC0911 VC0911 VC0911 971304 972992 + trehalose-6-phosphate hydrolase similar to SP:P39795 PID:580942 PID:1000452 GB:AL009126%3B identified by sequence similarity gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=VC0911 VC0913 VC0913 VC0913 974049 975107 + hypothetical protein gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=VC0913 VC0914 VC0914 VC0914 975107 978217 + multidrug resistance protein similar to PID:1653153%3B identified by sequence similarity gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=VC0914 VC0916 VC0916 VC0916 978644 979144 + phosphotyrosine protein phosphatase similar to SP:P41893 PID:602992%3B identified by sequence similarity gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=VC0916 VC0917 VC0917 VC0917 979457 980575 + UDP-N-acetylglucosamine 2-epimerase similar to GB:M87049 SP:P27828 GB:L18799 PID:148189 PID:304919%3B identified by sequence similarity gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=VC0917 VC0918 VC0918 wecC wecC 980595 981836 + UDP-N-acetyl-D-mannosamine dehydrogenase catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=VC0918 VC0919 VC0919 VC0919 981833 982387 + serine acetyltransferase-like protein similar to GB: GB: GB: PID:1107505 PID:1184048%3B identified by sequence similarity gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=VC0919 VC0920 VC0920 VC0920 982384 983532 + exopolysaccharide biosynthesis protein EpsF similar to GP:1276879%3B identified by sequence similarity gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=VC0920 VC0921 VC0921 VC0921 983529 984938 + polysaccharide export protein similar to PID:747670 SP:Q48457%3B identified by sequence similarity gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=VC0921 VC0922 VC0922 VC0922 984935 986155 + hypothetical protein gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=VC0922 VC0923 VC0923 VC0923 986166 986597 + serine acetyltransferase-like protein similar to GB:AE000511 SP:P71405 PID:1518452 PID:2314370%3B identified by sequence similarity gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=VC0923 VC0924 VC0924 VC0924 986597 987937 + capsular polysaccharide biosynthesis protein CapK similar to GB:U10927 SP:P39860 PID:506707%3B identified by sequence similarity gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=VC0924 VC0925 VC0925 VC0925 987913 989010 + polysaccharide biosynthesis protein similar to GB:AE000666%3B identified by sequence similarity gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=VC0925 VC0926 VC0926 VC0926 989007 990179 + hypothetical protein gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=VC0926 VC0927 VC0927 VC0927 990169 990921 + UDP-N-acetyl-D-mannosamine transferase similar to GB:U09239 PID:485280%3B identified by sequence similarity gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=VC0927 VC0928 VC0928 VC0928 991117 991932 + hypothetical protein gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=VC0928 VC0929 VC0929 VC0929 992138 993364 - hypothetical protein gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=VC0929 VC0930 VC0930 VC0930 993628 996501 + hemolysin-like protein similar to SP:P09545 GB:M36855 GB:X51746 PID:1136779 PID:155182%3B identified by sequence similarity gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=VC0930 VC0931 VC0931 VC0931 996656 997972 - hypothetical protein gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=VC0931 VC0932 VC0932 VC0932 998148 998635 - gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=VC0932 VC0934 VC0934 VC0934 999242 1000639 + capsular polysaccharide biosynthesis glycosyltransferase similar to GB:U00096 SP:P71241 PID:1407618 PID:1736749 PID:1736753%3B identified by sequence similarity gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=VC0934 VC0935 VC0935 VC0935 1000710 1001906 + hypothetical protein gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=VC0935 VC0936 VC0936 VC0936 1001910 1002437 + polysaccharide export-like protein similar to GB:L05588 SP:Q02728 PID:152191%3B identified by sequence similarity gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=VC0936 VC0937 VC0937 VC0937 1002462 1004675 + exopolysaccharide biosynthesis protein similar to GP:3493609%3B identified by sequence similarity gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=VC0937 VC0938 VC0938 VC0938 1004672 1005379 + hypothetical protein gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=VC0938 VC0939 VC0939 VC0939 1005358 1005792 + hypothetical protein gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=VC0939 VC0940 VC0940 VC0940 1005943 1006539 - hypothetical protein gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=VC0940 VC0941 VC0941 glyA glyA 1006880 1008130 + serine hydroxymethyltransferase 'catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate' gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=VC0941 VC0942 VC0942 VC0942 1008294 1008647 - hypothetical protein gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=VC0942 VC0943 VC0943 VC0943 1008816 1009781 - lipoyl synthase catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=VC0943 VC0944 VC0944 lipB lipB 1009774 1010433 - lipoate-protein ligase B lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=VC0944 VC0945 VC0945 VC0945 1010612 1010890 - hypothetical protein gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=VC0945 VC0947 VC0947 VC0947 1011038 1012213 - D-alanyl-D-alanine carboxypeptidase similar to SP:P04287 PID:146620 PID:147661 PID:41212 GB:U00096%3B identified by sequence similarity gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=VC0947 VC0948 VC0948 VC0948 1012305 1013096 - rare lipoprotein A similar to GB:M18276 SP:P10100 PID:147660 GB:U00096 PID:1651260%3B identified by sequence similarity gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=VC0948 VC0949 VC0949 VC0949 1013096 1014217 - rod shape-determining protein RodA similar to GB:M22857 SP:P15035 PID:147695 GB:U00096 PID:1651261%3B identified by sequence similarity gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=VC0949 VC0950 VC0950 VC0950 1014214 1016130 - penicillin-binding protein 2 similar to SP:P08150 GB:X04516 PID:147694 PID:42316 GB:U00096%3B identified by sequence similarity gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=VC0950 VC0951 VC0951 VC0951 1016137 1016607 - rRNA large subunit methyltransferase SPOUT methyltransferase family protein%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=VC0951 VC0952 VC0952 VC0952 1016610 1016927 - hypothetical protein gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=VC0952 VC0953 VC0953 holA holA 1016996 1018024 - DNA polymerase III subunit delta required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=VC0953 VC0954 VC0954 VC0954 1018030 1018671 - rare lipoprotein B similar to GB:L42023 PID:1006045 PID:1221028 PID:1205169 SP:Q57457%3B identified by sequence similarity gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=VC0954 VC0956 VC0956 leuS leuS 1018821 1021397 - leucyl-tRNA synthetase 'leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase' gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=VC0956 VC0957 VC0957 VC0957 1021527 1021997 + hypothetical protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=VC0957 VC0958 VC0958 lnt lnt 1022053 1023570 - apolipoprotein N-acyltransferase Transfers the fatty acyl group on membrane lipoproteins gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=VC0958 VC0959 VC0959 VC0959 1023611 1024486 - hemolysin similar to GB:U00096 PID:1778577 PID:1786879%3B identified by sequence similarity gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=VC0959 VC0960 VC0960 VC0960 1024556 1025020 - metalloprotease gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=VC0960 VC0961 VC0961 VC0961 1025017 1026120 - PhoH family protein similar to GB:U00096 PID:1778579 PID:1786881%3B identified by sequence similarity gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=VC0961 VC0962 VC0962 VC0962 1026188 1027612 - (dimethylallyl)adenosine tRNA methylthiotransferase catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=VC0962 VC0963 VC0963 VC0963 1027836 1029029 + 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase 'catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol' gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=VC0963 VC0964 VC0964 VC0964 1029142 1029651 - PTS system glucose-specific transporter subunit functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system%3B functions in the transport and phosphorylation of glucose gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=VC0964 VC0965 VC0965 VC0965 1029760 1031481 - phosphoenolpyruvate-protein phosphotransferase 'Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system' gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=VC0965 VC0966 VC0966 VC0966 1031615 1031872 - phosphocarrier protein HPr similar to SP:P07006 GB:J02796 GB:M10425 PID:145687 PID:147263%3B identified by sequence similarity gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=VC0966 VC0968 VC0968 VC0968 1032170 1033138 - cysteine synthase A similar to GB:M21451 SP:P11096 GB:X12615 PID:145686 PID:41201%3B identified by sequence similarity gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=VC0968 VC0969 VC0969 VC0969 1033261 1034013 - sulfate transport protein CysZ role in sulfur assimilation gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=VC0969 VC0970 VC0970 VC0970 1034243 1035118 + cell division protein ZipA interacts with cell division protein FitsZ and may be required to anchor septal ring structure gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=VC0970 VC0971 VC0971 ligA ligA 1035251 1037260 + NAD-dependent DNA ligase LigA this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=VC0971 VC0972 VC0972 VC0972 1037891 1038940 + porin similar to SP:P24305%3B identified by sequence similarity gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=VC0972 VC0973 VC0973 VC0973 1039017 1039832 + hypothetical protein gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=VC0973 VC0974 VC0974 VC0974 1039893 1040312 + MerR family transcriptional regulator similar to GB:U00096 SP:P77565 PID:1773169 PID:1786695%3B identified by sequence similarity gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=VC0974 VC0975 VC0975 VC0975 1040356 1040805 - hypothetical protein gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=VC0975 VC0976 VC0976 VC0976 1040813 1041733 - hypothetical protein gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=VC0976 VC0977 VC0977 VC0977 1042164 1043084 - hypothetical protein gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=VC0977 VC0979 VC0979 VC0979 1043447 1044274 - short chain dehydrogenase similar to GB:U00096 SP:P77388 PID:1773175 PID:1786701%3B identified by sequence similarity gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=VC0979 VC0980 VC0980 VC0980 1044317 1045231 - epimerase gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=VC0980 VC0981 VC0981 VC0981 1045625 1046194 + phosphodiesterase gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=VC0981 VC0982 VC0982 VC0982 1046275 1046568 - selenoprotein W-like protein similar to SP:O19097%3B identified by sequence similarity gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=VC0982 VC0983 VC0983 VC0983 1046609 1047130 - regulatory protein ToxS similar to GB:M62761 SP:P24003 PID:155304%3B identified by sequence similarity gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=VC0983 VC0984 VC0984 VC0984 1047140 1048024 - cholera toxin transcriptional activator similar to GB:M21249 SP:P15795 PID:155249 PID:155303%3B identified by sequence similarity gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=VC0984 VC0985 VC0985 VC0985 1048252 1050159 + heat shock protein 90 molecular chaperone gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=VC0985 VC0986 VC0986 adk adk 1050494 1051138 + adenylate kinase essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=VC0986 VC0987 VC0987 hemH hemH 1051253 1052227 + ferrochelatase protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=VC0987 VC0988 VC0988 tppB tppB 1052327 1053871 - tripeptide transporter permease mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=VC0988 VC0990 VC0990 rfaH rfaH 1054316 1054813 + transcriptional activator RfaH similar to GB:M87049 SP:P26614 GB:X65013 PID:1209302 PID:148241%3B identified by sequence similarity gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=VC0990 VC0991 VC0991 asnB asnB 1054961 1056625 - asparagine synthetase B 'functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP' gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=VC0991 VC0992 VC0992 VC0992 1056821 1058407 - glutathione-regulated potassium-efflux system protein KefB similar to SP:P52068 GB:U00096 PID:1773160 PID:1786685%3B identified by sequence similarity gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=VC0992 VC0993 VC0993 VC0993 1058502 1059716 - N-acetylglucosamine repressor similar to GP:2541902%3B identified by sequence similarity gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=VC0993 VC0994 VC0994 nagA nagA 1059719 1060855 - N-acetylglucosamine-6-phosphate deacetylase catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=VC0994 VC0995 VC0995 VC0995 1061324 1062895 + PTS system N-acetylglucosamine-specific transporter subunit IIABC similar to GP:2541900%3B identified by sequence similarity gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=VC0995 VC0997 VC0997 VC0997 1063143 1064813 + glutaminyl-tRNA synthetase 'catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA' gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=VC0997 VC0998 VC0998 VC0998 1064978 1069843 + hypothetical protein gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=VC0998 VC0999 VC0999 truA truA 1069965 1070759 + tRNA pseudouridine synthase A 'mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability' gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=VC0999 VC1000 VC1000 VC1000 1070933 1071859 + acetyl-CoA carboxylase subunit beta catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=VC1000 VC1001 VC1001 VC1001 1071904 1073169 + folylpolyglutamate synthase/dihydrofolate synthase similar to GB:M68934 SP:P08192 GB:M32445 PID:146009 PID:146020%3B identified by sequence similarity gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=VC1001 VC1002 VC1002 VC1002 1073170 1073766 + DedD protein similar to GB:M68934 SP:P09549 PID:146366 GB:U00096 PID:1788653%3B identified by sequence similarity gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=VC1002 VC1003 VC1003 VC1003 1073829 1074320 + bacteriocin production protein similar to GB:J01666 SP:P08550 PID:146367 PID:147415 GB:U00096%3B identified by sequence similarity gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=VC1003 VC1004 VC1004 VC1004 1074353 1075867 + amidophosphoribosyltransferase Catalyzes first step of the de novo purine nucleotide biosynthetic pathway gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=VC1004 VC1005 VC1005 VC1005 1075995 1077320 - hypothetical protein gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=VC1005 VC1006 VC1006 VC1006 1077421 1078152 - ribonuclease T Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=VC1006 VC1008 VC1008 VC1008 1078369 1079253 + sodium-type flagellar protein MotY similar to GB:U06949 SP:P46233 PID:497129%3B identified by sequence similarity gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=VC1008 VC1009 VC1009 VC1009 1079302 1079742 - hypothetical protein gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=VC1009 VC1010 VC1010 VC1010 1079901 1080317 - lactoylglutathione lyase similar to GB:U06949 SP:P46235 PID:497131%3B identified by sequence similarity gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=VC1010 VC1011 VC1011 VC1011 1080358 1080999 - endonuclease III similar to GB:J02857 SP:P20625 PID:146972 GB:U00096 PID:1742691%3B identified by sequence similarity gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=VC1011 VC1012 VC1012 VC1012 1081026 1081718 - electron transport complex protein RsxE in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents%3B similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=VC1012 VC1013 VC1013 VC1013 1081720 1082349 - electron transport complex protein RnfG part of membrane-bound complex hought to be involved in electron transport to nitrogen gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=VC1013 VC1014 VC1014 rnfD rnfD 1082361 1083407 - electron transport complex protein RnfD RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=VC1014 VC1015 VC1015 VC1015 1083407 1085812 - electron transport complex protein RnfC part of membrane-bound complex thought to be involved in electron transport to nitrogen gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=VC1015 VC1016 VC1016 VC1016 1085740 1086327 - electron transport complex protein RnfB part of membrane-bound complex thought to be involved in electron transport to nitrogen gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=VC1016 VC1017 VC1017 VC1017 1086327 1086908 - Na(+)-translocating NADH-quinone reductase subunit E similar to GB:U00096 PID:1787914%3B identified by sequence similarity gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=VC1017 VC1018 VC1018 uvrB uvrB 1087790 1089819 + excinuclease ABC subunit B 'The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion' gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=VC1018 VC1021 VC1021 VC1021 1090250 1091617 + LuxO repressor protein similar to GB:L26221 PID:418061 SP:P54299%3B identified by sequence similarity gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=VC1021 VC1022 VC1022 VC1022 1091621 1091962 + phosphorelay protein similar to GP:4154500%3B identified by sequence similarity gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=VC1022 VC1023 VC1023 VC1023 1091951 1092841 - hypothetical protein gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=VC1023 VC1024 VC1024 moaA moaA 1093132 1094136 + molybdenum cofactor biosynthesis protein A 'together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z' gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=VC1024 VC1025 VC1025 VC1025 1094196 1094708 + molybdenum cofactor biosynthesis protein B similar to GB:X70420 SP:P30746 PID:42009 GB:U00096 PID:1651355%3B identified by sequence similarity gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=VC1025 VC1026 VC1026 moaC moaC 1094716 1095198 + molybdenum cofactor biosynthesis protein MoaC MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=VC1026 VC1027 VC1027 moaD moaD 1095195 1095440 + molybdopterin synthase small subunit catalyzes the conversion of molybdopterin precursor Z into molybdopterin gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=VC1027 VC1028 VC1028 VC1028 1095442 1095894 + molybdenum cofactor biosynthesis protein E similar to GB:X70420 SP:P30749 PID:42012 GB:U00096 PID:1787003%3B identified by sequence similarity gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=VC1028 VC1029 VC1029 VC1029 1095909 1096883 - GGDEF family protein similar to PID:1001216 PID:1673324%3B identified by sequence similarity gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=VC1029 VC1031 VC1031 VC1031 1097088 1097528 + inosine monophosphate dehydrogenase-like protein similar to GB:L77117 SP:Q58069 PID:1592300%3B identified by sequence similarity gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=VC1031 VC1033 VC1033 zntA zntA 1097641 1099947 + zinc/cadmium/mercury/lead-transporting ATPase 'P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury' gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=VC1033 VC1034 VC1034 VC1034 1100393 1101169 + uridine phosphorylase catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=VC1034 VC1035 VC1035 VC1035 1101242 1102135 - hypothetical protein gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=VC1035 VC1036 VC1036 metG metG 1102361 1104412 - methionyl-tRNA synthetase methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=VC1036 VC1037 VC1037 VC1037 1104498 1105646 + mrp protein similar to SP:P21590 GB:U00007 GB:X55791 PID:405896 PID:42017%3B identified by sequence similarity gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=VC1037 VC1038 VC1038 VC1038 1105805 1106464 + uridine kinase functions in pyrimidine salvage%3B pyrimidine ribonucleoside kinase%3B phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=VC1038 VC1039 VC1039 VC1039 1106562 1108673 + asmA protein similar to GB:M90069 SP:P28249 GB:U11035 PID:551799 PID:684920%3B identified by sequence similarity gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=VC1039 VC1040 VC1040 VC1040 1108745 1109350 - cob(I)yrinic acid a%2Cc-diamide adenosyltransferase 'catalyzes the formation of adenosylcob(III)yrinic acid a%2Cc-diamide from cob(I)yrinic acid a%2Cc-diamide' gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=VC1040 VC1041 VC1041 VC1041 1109436 1109903 + phosphotyrosine protein phosphatase similar to PID:1001414 PID:1001408%3B identified by sequence similarity gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=VC1041 VC1042 VC1042 VC1042 1109930 1111228 - long-chain fatty acid transport protein similar to GB:M60607 SP:P10384 GB:Y00552 PID:145910 PID:41372%3B identified by sequence similarity gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=VC1042 VC1043 VC1043 VC1043 1111531 1112817 - long-chain fatty acid transport protein similar to GB:M60607 SP:P10384 GB:Y00552 PID:145910 PID:41372%3B identified by sequence similarity gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=VC1043 VC1044 VC1044 VC1044 1113077 1113838 - hypothetical protein gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=VC1044 VC1045 VC1045 VC1045 1113801 1114367 - RNA polymerase sigma factor Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=VC1045 VC1046 VC1046 fadI fadI 1114895 1116202 + 3-ketoacyl-CoA thiolase FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=VC1046 VC1047 VC1047 fadJ fadJ 1116202 1118328 + multifunctional fatty acid oxidation complex subunit alpha multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=VC1047 VC1048 VC1048 VC1048 1118454 1119002 + hypothetical protein gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=VC1048 VC1049 VC1049 VC1049 1119081 1119980 - LysR family transcriptional regulator similar to GP:1139588%3B identified by sequence similarity gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=VC1049 VC1050 VC1050 VC1050 1120189 1121295 + response regulator similar to SP:P37055 GB:M64675 GB:X66003 PID:41734 GB:U00096%3B identified by sequence similarity gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=VC1050 VC1051 VC1051 VC1051 1121465 1121596 + hypothetical protein gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=VC1051 VC1052 VC1052 VC1052 1121596 1121994 + hypothetical protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=VC1052 VC1053 VC1053 VC1053 1122126 1122671 + adenine phosphoribosyltransferase catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=VC1053 VC1054 VC1054 VC1054 1122690 1124768 + DNA polymerase III subunits gamma and tau 'catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA' gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=VC1054 VC1055 VC1055 VC1055 1124806 1125168 + hypothetical protein gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=VC1055 VC1056 VC1056 recR recR 1125183 1125785 + recombination protein RecR 'involved in a recombinational process of DNA repair%2C independent of the recBC complex' gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=VC1056 VC1057 VC1057 VC1057 1125895 1126146 - proteinase inhibitor similar to GB:U73004 SP:P97430 PID:1763263 PID:1945383 PID:1945451%3B identified by sequence similarity gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=VC1057 VC1058 VC1058 VC1058 1126281 1126718 + hypothetical protein gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=VC1058 VC1059 VC1059 VC1059 1126812 1127555 - short chain dehydrogenase similar to SP:P31808 GB:U17433 PID:603171 GB:U00096 PID:1742066%3B identified by sequence similarity gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=VC1059 VC1060 VC1060 VC1060 1127714 1128775 + periplasmic protease SohB%3B periplasmic protein%3B member of the peptidase S49 family gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=VC1060 VC1061 VC1061 VC1061 1128900 1129967 - cysteine synthase/cystathionine beta-synthase family protein similar to GB:AL123456%3B identified by sequence similarity gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=VC1061 VC1062 VC1062 VC1062 1130089 1130547 + AsnC family transcriptional regulator similar to SP:P54986 GB:U00096 PID:1580718 PID:1773131 PID:1786652%3B identified by sequence similarity gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=VC1062 VC1063 VC1063 VC1063 1130556 1131416 - acyl-CoA thioesterase similar to GB:M63308 SP:P23911 PID:147932 GB:U00096 PID:1773136%3B identified by sequence similarity gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=VC1063 VC1064 VC1064 VC1064 1131567 1131998 + lipoprotein-like protein similar to GB:U00096 SP:P77717 PID:1773137 PID:1786658%3B identified by sequence similarity gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=VC1064 VC1065 VC1065 VC1065 1132052 1132354 - methylated-DNA--protein-cysteine methyltransferase-like protein similar to GB:U00096 SP:P75707 PID:1786659%3B identified by sequence similarity gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=VC1065 VC1066 VC1066 VC1066 1132405 1133148 + hypothetical protein gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=VC1066 VC1067 VC1067 VC1067 1133235 1135316 + hypothetical protein gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=VC1067 VC1068 VC1068 VC1068 1135858 1136199 + ArsR family transcriptional regulator similar to SP:P15905 GB:X16045 PID:42717%3B identified by sequence similarity gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=VC1068 VC1069 VC1069 VC1069 1136296 1137297 + glyceraldehyde-3-phosphate dehydrogenase catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=VC1069 VC1070 VC1070 VC1070 1137311 1137808 + phosphatase similar to PID:2224838%3B identified by sequence similarity gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=VC1070 VC1071 VC1071 VC1071 1137847 1139082 + transporter similar to GP:3128308%3B identified by sequence similarity gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=VC1071 VC1073 VC1073 VC1073 1139646 1142912 + chitinase similar to PID:1698444%3B identified by sequence similarity gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=VC1073 VC1074 VC1074 VC1074 1143002 1143832 - hypothetical protein gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=VC1074 VC1075 VC1075 VC1075 1144116 1144658 + hypothetical protein gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=VC1075 VC1076 VC1076 VC1076 1144671 1145510 + AraC family transcriptional regulator similar to GB:U00096 SP:P77634 PID:1778460 PID:1786758%3B identified by sequence similarity gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=VC1076 VC1077 VC1077 VC1077 1145507 1145995 - hypothetical protein gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=VC1077 VC1078 VC1078 VC1078 1146074 1146214 - hypothetical protein gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=VC1078 VC1079 VC1079 VC1079 1146259 1147248 - hypothetical protein gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=VC1079 VC1080 VC1080 VC1080 1147494 1147859 + hypothetical protein gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=VC1080 VC1081 VC1081 VC1081 1147856 1148998 + response regulator similar to GP:551953%3B identified by sequence similarity gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=VC1081 VC1082 VC1082 VC1082 1149033 1149398 + response regulator similar to PID:940149 GB:AE000512%3B identified by sequence similarity gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=VC1082 VC1083 VC1083 VC1083 1149395 1149979 + hypothetical protein gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=VC1083 VC1084 VC1084 VC1084 1149990 1151309 + sensory box sensor histidine kinase similar to PID:1773367%3B identified by sequence similarity gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=VC1084 VC1085 VC1085 VC1085 1151321 1152625 + sensor histidine kinase similar to PID:643672%3B identified by sequence similarity gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=VC1085 VC1086 VC1086 VC1086 1152625 1154235 + response regulator similar to PID:1651932%3B identified by sequence similarity gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=VC1086 VC1087 VC1087 VC1087 1154252 1155595 + response regulator similar to GB:M63670 SP:P26408 GB:X61007 PID:151907 PID:46054%3B identified by sequence similarity gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=VC1087 VC1088 VC1088 VC1088 1155624 1157228 - sensor histidine kinase similar to GB:L13078 SP:Q06067 PID:290419 GB:U00096 PID:1736874%3B identified by sequence similarity gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=VC1088 VC1089 VC1089 VC1089 1157232 1158044 - periplasmic binding protein-like protein similar to SP:P16682 GB:U14003 PID:147197 PID:216592 PID:536949%3B identified by sequence similarity gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=VC1089 VC1091 VC1091 VC1091 1158668 1160299 + oligopeptide ABC transporter substrate-binding protein similar to SP:P06202 GB:X05491 GB:X52093 PID:47802 PID:47808%3B identified by sequence similarity gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=VC1091 VC1092 VC1092 oppB oppB 1160448 1161368 + oligopeptide transporter permease similar to GB:U00096 PID:1742033 PID:1787497 PID:1805525%3B identified by sequence similarity gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=VC1092 VC1093 VC1093 VC1093 1161382 1162284 + oligopeptide ABC transporter permease similar to GB:U00096 SP:P77664 PID:1742034 PID:1787498 PID:1805526%3B identified by sequence similarity gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=VC1093 VC1094 VC1094 oppD oppD 1162309 1163283 + oligopeptide ABC transporter ATP-binding protein similar to GB:U00096 SP:P76027 PID:1742035 PID:1787499 PID:1805527%3B identified by sequence similarity gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=VC1094 VC1095 VC1095 VC1095 1163262 1164272 + oligopeptide ABC transporter ATP-binding protein similar to GB:U00096 SP:P77737 PID:1742036 PID:1787500 PID:1805528%3B identified by sequence similarity gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=VC1095 VC1096 VC1096 VC1096 1164422 1165369 + hypothetical protein gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=VC1096 VC1097 VC1097 VC1097 1165467 1167611 - phosphate acetyltransferase catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=VC1097 VC1098 VC1098 VC1098 1167747 1168943 - acetate kinase AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=VC1098 VC1099 VC1099 VC1099 1169290 1169748 + hypothetical protein gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=VC1099 VC1100 VC1100 VC1100 1169871 1170281 - hypothetical protein gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=VC1100 VC1101 VC1101 VC1101 1170719 1171684 + hypothetical protein gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=VC1101 VC1102 VC1102 VC1102 1171760 1172743 + ABC transporter permease similar to GB:U14003 SP:P37772 PID:537073 GB:U00096 PID:1790678%3B identified by sequence similarity gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=VC1102 VC1103 VC1103 VC1103 1172740 1173534 + ABC transporter ATP-binding protein similar to GB:L42023 SP:P44785 PID:1005459 PID:1220700 PID:1204872%3B identified by sequence similarity gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=VC1103 VC1104 VC1104 VC1104 1173701 1175170 + GGDEF family protein similar to PID:1001780 PID:1001789%3B identified by sequence similarity gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=VC1104 VC1105 VC1105 VC1105 1175203 1176174 - hypothetical protein gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=VC1105 VC1106 VC1106 VC1106 1176331 1176960 + preprotein translocase SecA subunit-like protein similar to SP:P06979 GB:X03239 PID:41605 GB:U00096 PID:1736570%3B identified by sequence similarity gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=VC1106 VC1107 VC1107 lolA lolA 1177056 1177652 + outer-membrane lipoprotein carrier protein participates with LolB in the incorporation of lipoprotein into the outer membrane gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=VC1107 VC1108 VC1108 VC1108 1177677 1179026 + recombination factor protein RarA gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=VC1108 VC1110 VC1110 VC1110 1179130 1180437 + seryl-tRNA synthetase 'catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA' gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=VC1110 VC1111 VC1111 VC1111 1180544 1181830 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 'catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate' gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=VC1111 VC1112 VC1112 VC1112 1181957 1183009 + biotin synthase similar to GB:J04423 SP:P12996 PID:145425 PID:490219 GB:U00096%3B identified by sequence similarity gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=VC1112 VC1113 VC1113 VC1113 1182993 1184147 + 8-amino-7-oxononanoate synthase catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=VC1113 VC1114 VC1114 VC1114 1184144 1184947 + biotin synthesis protein BioC similar to GB:J04423 SP:P12999 PID:145427 PID:490221 GB:U00096%3B identified by sequence similarity gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=VC1114 VC1115 VC1115 bioD bioD 1184923 1185639 + dithiobiotin synthetase 'DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium' gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=VC1115 VC1116 VC1116 VC1116 1185721 1185930 - hypothetical protein gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=VC1116 VC1117 VC1117 VC1117 1186157 1187020 + heat shock protein HtpX metalloprotease gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=VC1117 VC1118 VC1118 VC1118 1187230 1187658 + transcriptional regulator similar to PID:1653608%3B identified by sequence similarity gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=VC1118 VC1119 VC1119 VC1119 1187655 1188380 + short chain dehydrogenase similar to SP:P25970%3B identified by sequence similarity gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=VC1119 VC1120 VC1120 VC1120 1188391 1189671 + hypothetical protein gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=VC1120 VC1121 VC1121 VC1121 1189671 1190480 + hypothetical protein gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=VC1121 VC1122 VC1122 VC1122 1190413 1191711 + cyclopropane-fatty-acyl-phospholipid synthase similar to GB:M98330 SP:P30010 PID:145514 GB:U00096 PID:1742735%3B identified by sequence similarity gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=VC1122 VC1123 VC1123 VC1123 1191714 1192253 + hypothetical protein gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=VC1123 VC1124 VC1124 VC1124 1192186 1192752 + hypothetical protein gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=VC1124 VC1125 VC1125 VC1125 1192749 1193276 + hypothetical protein gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=VC1125 VC1126 VC1126 VC1126 1193367 1194737 - adenylosuccinate lyase Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=VC1126 VC1127 VC1127 VC1127 1194795 1195412 - hypothetical protein HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=VC1127 VC1128 VC1128 mnmA mnmA 1195435 1196553 - tRNA-specific 2-thiouridylase MnmA catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=VC1128 VC1129 VC1129 VC1129 1196815 1198119 + inosine-guanosine kinase similar to GB:D00798 SP:P22937 PID:216562 PID:520811 PID:216519%3B identified by sequence similarity gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=VC1129 VC1130 VC1130 VC1130 1198167 1198580 - DNA-binding protein H-NS similar to GB:X07688 SP:P08936 GB:X57231 GB:X59940 GB:X67326%3B identified by sequence similarity gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=VC1130 VC1131 VC1131 VC1131 1199268 1200869 + hypothetical protein gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=VC1131 VC1132 VC1132 hisG hisG 1201260 1202174 + ATP phosphoribosyltransferase long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=VC1132 VC1133 VC1133 hisD hisD 1202179 1203474 + histidinol dehydrogenase catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=VC1133 VC1134 VC1134 VC1134 1203478 1204518 + histidinol-phosphate aminotransferase catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=VC1134 VC1135 VC1135 VC1135 1204570 1205643 + imidazole glycerol-phosphate dehydratase/histidinol phosphatase catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=VC1135 VC1136 VC1136 hisH hisH 1205643 1206254 + imidazole glycerol phosphate synthase subunit HisH 'with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide' gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=VC1136 VC1137 VC1137 VC1137 1206297 1207034 + 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-(5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=VC1137 VC1138 VC1138 VC1138 1207016 1207789 + imidazole glycerol phosphate synthase subunit HisF 'catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamideribonucleotide and glutamate%3B the HisF subunit acts as a cyclase' gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=VC1138 VC1139 VC1139 VC1139 1207786 1208418 + bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=VC1139 VC1140 VC1140 VC1140 1208619 1209344 - pseudouridine synthase similar to GB:U00096 SP:P75966 PID:1787380%3B identified by sequence similarity gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=VC1140 VC1141 VC1141 VC1141 1209652 1211877 + isocitrate dehydrogenase similar to PID:1030696%3B identified by sequence similarity gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=VC1141 VC1142 VC1142 VC1142 1211976 1212206 - cold shock-like protein CspD similar to SP:P24245 GB:U00096 PID:1651400 PID:1787107%3B identified by sequence similarity gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=VC1142 VC1143 VC1143 clpS clpS 1212670 1212990 + ATP-dependent Clp protease adaptor protein ClpS involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=VC1143 VC1144 VC1144 clpA clpA 1213029 1215299 + ATP-dependent Clp protease ATP-binding subunit ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=VC1144 VC1145 VC1145 VC1145 1215368 1217044 - hypothetical protein gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=VC1145 VC1146 VC1146 grxA grxA 1217246 1217509 - glutaredoxin 1 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=VC1146 VC1147 VC1147 VC1147 1217797 1219065 + iron-containing alcohol dehydrogenase similar to SP:P10127 PID:1150583 PID:1322937 PID:3337%3B identified by sequence similarity gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=VC1147 VC1148 VC1148 VC1148 1219156 1220010 - DNA-binding transcriptional regulator HexR 'Represses the expression of the zwf%2C eda%2C glp and gap' gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=VC1148 VC1149 VC1149 VC1149 1220318 1221964 - glutamate decarboxylase similar to SP:Q05683 PID:204226%3B identified by sequence similarity gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=VC1149 VC1150 VC1150 VC1150 1222074 1222583 - hypothetical protein gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=VC1150 VC1151 VC1151 VC1151 1222772 1223677 - hypothetical protein gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=VC1151 VC1152 VC1152 VC1152 1223698 1224633 - hypothetical protein gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=VC1152 VC1153 VC1153 VC1153 1224975 1225583 + hypothetical protein gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=VC1153 VC1154 VC1154 VC1154 1225679 1226227 - hypothetical protein gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=VC1154 VC1155 VC1155 VC1155 1226418 1226963 - response regulator similar to GP:551953%3B identified by sequence similarity gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=VC1155 VC1156 VC1156 VC1156 1226912 1228866 - gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=VC1156 VC1158 VC1158 VC1158 1229089 1230354 + hypothetical protein gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=VC1158 VC1159 VC1159 VC1159 1230431 1231570 + phosphoserine aminotransferase catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=VC1159 VC1160 VC1160 VC1160 1231651 1232640 - hypothetical protein gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=VC1160 VC1161 VC1161 VC1161 1232640 1234148 - gonadoliberin III-like protein similar to SP:P51923 PID:987488%3B identified by sequence similarity gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=VC1161 VC1162 VC1162 VC1162 1234157 1234894 - hypothetical protein gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=VC1162 VC1163 VC1163 VC1163 1235014 1235985 - hypothetical protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=VC1163 VC1164 VC1164 VC1164 1236097 1236837 - hypothetical protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=VC1164 VC1165 VC1165 VC1165 1236963 1237832 - hypothetical protein gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=VC1165 VC1166 VC1166 aspS aspS 1238124 1239899 + aspartyl-tRNA synthetase 'catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes' gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=VC1166 VC1167 VC1167 VC1167 1239996 1240574 + thymidine kinase catalyzes the formation of thymidine 5'-phosphate from thymidine gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=VC1167 VC1168 VC1168 VC1168 1240676 1241932 - proton/glutamate symporter similar to SP:P21345 GB:M32488 GB:M84805 PID:147160 PID:396412%3B identified by sequence similarity gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=VC1168 VC1169 VC1169 trpA trpA 1242248 1243054 - tryptophan synthase subunit alpha catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=VC1169 VC1170 VC1170 VC1170 1243054 1244244 - tryptophan synthase subunit beta catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=VC1170 VC1171 VC1171 trpC trpC 1244285 1245694 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=VC1171 VC1172 VC1172 trpD trpD 1245700 1246698 - anthranilate phosphoribosyltransferase Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=VC1172 VC1173 VC1173 VC1173 1246719 1247330 - anthranilate synthase component II TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=VC1173 VC1174 VC1174 VC1174 1247327 1248898 - anthranilate synthase component I 'with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine' gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=VC1174 VC1177 VC1177 VC1177 1249234 1250106 + hypothetical protein gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=VC1177 VC1178 VC1178 VC1178 1250109 1250729 + hypothetical protein gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=VC1178 VC1179 VC1179 VC1179 1250862 1251827 + pseudouridine synthase similar to PID:602963 GB:U00096 PID:1787524%3B identified by sequence similarity gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=VC1179 VC1180 VC1180 VC1180 1251995 1253716 - cysteine/glutathione ABC transporter membrane/ATP-binding protein in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=VC1180 VC1181 VC1181 VC1181 1253709 1255496 - cysteine/glutathione ABC transporter membrane/ATP-binding protein in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=VC1181 VC1182 VC1182 VC1182 1255616 1256572 - thioredoxin reductase similar to GB:J03762 SP:P09625 PID:148073 PID:347239 GB:U00096%3B identified by sequence similarity gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=VC1182 VC1183 VC1183 VC1183 1257047 1257706 + hypothetical protein gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=VC1183 VC1184 VC1184 VC1184 1257681 1258931 + NifS-like protein similar to GB:U00096 PID:1742766 PID:1742773 PID:1787970%3B identified by sequence similarity gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=VC1184 VC1185 VC1185 VC1185 1259189 1260520 + GGDEF family protein similar to GP:2983209%3B identified by sequence similarity gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=VC1185 VC1186 VC1186 VC1186 1260621 1261385 - SanA protein similar to SP:P33017 PID:405877 PID:1161522 GB:U00096 PID:1788466%3B identified by sequence similarity gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=VC1186 VC1187 VC1187 VC1187 1261358 1261726 - hypothetical protein gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=VC1187 VC1188 VC1188 VC1188 1261730 1263418 - malate dehydrogenase malic enzyme%3B oxaloacetate-decarboxylating%3B NAD-dependent%3B catalyzes the formation of pyruvate form malate gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=VC1188 VC1189 VC1189 VC1189 1263812 1264234 + hypothetical protein gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=VC1189 VC1190 VC1190 hemH hemH 1264436 1265542 - phosphoribosylaminoimidazole-succinocarboxamide synthase catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=VC1190 VC1191 VC1191 VC1191 1265708 1266106 - hypothetical protein gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=VC1191 VC1193 VC1193 VC1193 1266398 1266595 - hypothetical protein gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=VC1193 VC1194 VC1194 VC1194 1266731 1267783 - hypothetical protein gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=VC1194 VC1195 VC1195 VC1195 1267848 1268519 - lipoprotein similar to SP:P37665 PID:466690 GB:U00096 PID:1789974%3B identified by sequence similarity gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=VC1195 VC1196 VC1196 VC1196 1268619 1269308 - hypothetical protein gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=VC1196 VC1197 VC1197 VC1197 1269433 1270128 - hypothetical protein gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=VC1197 VC1198 VC1198 VC1198 1270299 1273364 + hypothetical protein gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=VC1198 VC1199 VC1199 VC1199 1273414 1273881 + hypothetical protein gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=VC1199 VC1200 VC1200 VC1200 1274131 1275342 + serine protease similar to SP:P51588%3B identified by sequence similarity gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=VC1200 VC1201 VC1201 VC1201 1275417 1276142 - hypothetical protein gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=VC1201 VC1202 VC1202 hutH hutH 1276291 1277826 - histidine ammonia-lyase catalyzes the degradation of histidine to urocanate and ammmonia gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=VC1202 VC1203 VC1203 VC1203 1277838 1279535 - urocanate hydratase catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=VC1203 VC1204 VC1204 VC1204 1279554 1280564 - formimidoylglutamase catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=VC1204 VC1205 VC1205 VC1205 1280554 1281762 - imidazolonepropionase 'catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate%2C the third step in the histidine degradation pathway' gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=VC1205 VC1206 VC1206 VC1206 1281866 1282576 - histidine utilization repressor similar to GB:M33922 SP:P22773 PID:151276%3B identified by sequence similarity gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=VC1206 VC1207 VC1207 VC1207 1282693 1283640 - hypothetical protein gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=VC1207 VC1208 VC1208 VC1208 1283779 1284099 - dsDNA-mimic protein highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=VC1208 VC1209 VC1209 VC1209 1284104 1284670 - elongation factor P 'Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein' gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=VC1209 VC1210 VC1210 VC1210 1284862 1285656 + hypothetical protein gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=VC1210 VC1211 VC1211 VC1211 1285750 1287864 + hypothetical protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=VC1211 VC1212 VC1212 VC1212 1287836 1290199 - DNA polymerase II 'Has polymerase%2C DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C' gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=VC1212 VC1213 VC1213 sirA sirA 1290575 1291219 + response regulator in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=VC1213 VC1214 VC1214 uvrC uvrC 1291219 1293051 + excinuclease ABC subunit C The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=VC1214 VC1215 VC1215 VC1215 1293099 1293656 + CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase similar to GB:M12299 SP:P06978 PID:473749 GB:U00096 PID:1736571%3B identified by sequence similarity gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=VC1215 VC1216 VC1216 VC1216 1294549 1295667 + GGDEF family protein similar to GB:AE000657%3B identified by sequence similarity gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=VC1216 VC1217 VC1217 VC1217 1295664 1296149 - hypothetical protein gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=VC1217 VC1219 VC1219 pheS pheS 1296440 1297423 + phenylalanyl-tRNA synthetase subunit alpha 'catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 1 subfamily' gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=VC1219 VC1220 VC1220 pheT pheT 1297450 1299837 + phenylalanyl-tRNA synthetase subunit beta 'catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily' gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=VC1220 VC1222 VC1222 ihfA ihfA 1300276 1300572 + integration host factor subunit alpha 'This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control' gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=VC1222 VC1223 VC1223 VC1223 1300556 1300792 - hypothetical protein gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=VC1223 VC1224 VC1224 VC1224 1300701 1301480 - hypothetical protein gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=VC1224 VC1226 VC1226 VC1226 1301949 1302605 + thiopurine S-methyltransferase catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds%3B may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=VC1226 VC1227 VC1227 VC1227 1302558 1302728 - hypothetical protein gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=VC1227 VC1228 VC1228 purT purT 1302698 1303879 - phosphoribosylglycinamide formyltransferase 2 'non-folate utilizing enzyme%2C catalyzes the production of beta-formyl glycinamide ribonucleotide from formate%2C ATP%2C and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP%3B involved in de novo purine biosynthesis' gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=VC1228 VC1229 VC1229 VC1229 1304027 1304902 - hypothetical protein gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=VC1229 VC1231 VC1231 VC1231 1305061 1305948 - cytidine deaminase Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=VC1231 VC1232 VC1232 VC1232 1306118 1306792 - hypothetical protein gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=VC1232 VC1233 VC1233 VC1233 1306783 1307172 - hypothetical protein gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=VC1233 VC1234 VC1234 sbcB sbcB 1307189 1308613 - exonuclease I Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=VC1234 VC1235 VC1235 VC1235 1308759 1310174 - sodium/dicarboxylate symporter similar to GB:U00096 PID:1742823 PID:1742828 PID:1788024%3B identified by sequence similarity gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=VC1235 VC1236 VC1236 VC1236 1310478 1310924 + PilB-like protein similar to SP:P39903 GB:U00096 PID:1742896 PID:1788077%3B identified by sequence similarity gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=VC1236 VC1237 VC1237 cobT cobT 1311451 1312560 + nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 'catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole' gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=VC1237 VC1238 VC1238 cobS cobS 1312560 1313345 + cobalamin synthase catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=VC1238 VC1239 VC1239 cobU cobU 1313354 1313893 + adenosylcobinamide kinase catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=VC1239 VC1240 VC1240 VC1240 1313900 1314502 + alpha-ribazole-5'-phosphate phosphatase similar to PID:727431 SP:P52086 GB:U00096 PID:1778556 PID:1786857%3B identified by sequence similarity gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=VC1240 VC1242 VC1242 VC1242 1314818 1315846 + succinylglutamate desuccinylase catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=VC1242 VC1244 VC1244 VC1244 1315915 1316922 + vtamin B12-transporter permease with BtuD and BtuF transports vitamin B12 into the cell gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=VC1244 VC1245 VC1245 VC1245 1316909 1317664 + vitamin B12-transporter ATPase ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=VC1245 VC1246 VC1246 VC1246 1318049 1318624 - hypothetical protein gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=VC1246 VC1247 VC1247 VC1247 1318803 1319198 - hypothetical protein gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=VC1247 VC1248 VC1248 VC1248 1319246 1320856 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=VC1248 VC1249 VC1249 VC1249 1321087 1321599 - hypothetical protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=VC1249 VC1250 VC1250 VC1250 1321865 1322764 - hypothetical protein gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=VC1250 VC1252 VC1252 VC1252 1322928 1324175 + competence damage protein CinA similar to GB:U00096 PID:1788583 PID:1799602%3B identified by sequence similarity gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=VC1252 VC1253 VC1253 VC1253 1324348 1324776 - hypothetical protein gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=VC1253 VC1254 VC1254 VC1254 1324877 1325155 - (Fe-S)-binding protein similar to GB:L42023 SP:P45154 PID:1007287 PID:1221440 PID:1205547%3B identified by sequence similarity gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=VC1254 VC1255 VC1255 nrdB nrdB 1325155 1326288 - ribonucleotide-diphosphate reductase subunit beta B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=VC1255 VC1256 VC1256 VC1256 1326384 1328669 - ribonucleotide-diphosphate reductase subunit alpha Catalyzes the rate-limiting step in dNTP synthesis gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=VC1256 VC1257 VC1257 VC1257 1329118 1329855 - 3-demethylubiquinone-9 3-methyltransferase Involved in ubiquinone biosynthesis gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=VC1257 VC1258 VC1258 VC1258 1330207 1332891 + DNA gyrase subunit A similar to GB:X80798 SP:P41513 PID:525202%3B identified by sequence similarity gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=VC1258 VC1259 VC1259 VC1259 1333104 1334102 + hypothetical protein gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=VC1259 VC1260 VC1260 VC1260 1334129 1335028 - AraC family transcriptional regulator similar to GP:2906236%3B identified by sequence similarity gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=VC1260 VC1261 VC1261 VC1261 1335279 1336493 + hypothetical protein gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=VC1261 VC1262 VC1262 VC1262 1336676 1336852 + hypothetical protein gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=VC1262 VC1263 VC1263 ribA ribA 1337023 1337673 + GTP cyclohydrolase II 'catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate' gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=VC1263 VC1264 VC1264 VC1264 1337809 1339116 + iron-regulated protein A similar to SP:P12608 PID:154525%3B identified by sequence similarity gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=VC1264 VC1265 VC1265 VC1265 1339323 1340708 + hypothetical protein gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=VC1265 VC1266 VC1266 VC1266 1340718 1341725 + hypothetical protein gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=VC1266 VC1267 VC1267 VC1267 1341706 1342788 + hypothetical protein gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=VC1267 VC1268 VC1268 VC1268 1343035 1344609 + hypothetical protein gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=VC1268 VC1269 VC1269 VC1269 1344755 1345303 + hypothetical protein gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=VC1269 VC1270 VC1270 VC1270 1345367 1346023 + glyoxylase II family protein similar to GB:U00096 SP:P75849 PID:1787158%3B identified by sequence similarity gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=VC1270 VC1271 VC1271 VC1271 1346017 1346733 - hypothetical protein gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=VC1271 VC1272 VC1272 VC1272 1346837 1347262 + hypothetical protein gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=VC1272 VC1273 VC1273 VC1273 1347624 1348742 + ABC transporter substrate-binding protein similar to PID:1653271%3B identified by sequence similarity gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=VC1273 VC1274 VC1274 VC1274 1348844 1349377 + hypothetical protein gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=VC1274 VC1275 VC1275 VC1275 1349387 1350670 + hypothetical protein gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=VC1275 VC1276 VC1276 VC1276 1350777 1352132 + sensor histidine kinase similar to GB:M23558 SP:P13799 GB:M23649 PID:143088 PID:143498%3B identified by sequence similarity gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=VC1276 VC1277 VC1277 VC1277 1352113 1352763 + LuxR family transcriptional regulator similar to GB:M21658 SP:P13800 GB:M23649 PID:143089 PID:143499%3B identified by sequence similarity gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=VC1277 VC1278 VC1278 VC1278 1352765 1353244 - MarR family transcriptional regulator similar to GB:AL009126%3B identified by sequence similarity gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=VC1278 VC1279 VC1279 VC1279 1353601 1355223 + BCCT family transporter similar to SP:P54417 PID:1524397 PID:2293330 GB:AL009126%3B identified by sequence similarity gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=VC1279 VC1280 VC1280 VC1280 1355388 1356683 - hypothetical protein gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=VC1280 VC1281 VC1281 VC1281 1356926 1357231 + PTS system cellobiose-specific transporter subunit IIB similar to GB:AL009126%3B identified by sequence similarity gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=VC1281 VC1282 VC1282 VC1282 1357310 1358650 + PTS system cellobiose-specific transporter subunit IIC similar to GB:AE000792%3B identified by sequence similarity gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=VC1282 VC1283 VC1283 VC1283 1358697 1359032 + PTS system cellobiose-specific transporter subunit IIA similar to SP:P17335 PID:145480 PID:145486 PID:145488 PID:145490%3B identified by sequence similarity gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=VC1283 VC1284 VC1284 VC1284 1359014 1360336 + 6-phospho-beta-glucosidase similar to SP:P46320 PID:895751 PID:1783269 GB:AL009126%3B identified by sequence similarity gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=VC1284 VC1285 VC1285 VC1285 1360359 1361117 + hypothetical protein gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=VC1285 VC1286 VC1286 VC1286 1361218 1362240 + LacI family transcription regulator similar to PID:882607 GB:U00096 PID:1789068%3B identified by sequence similarity gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=VC1286 VC1287 VC1287 VC1287 1362386 1364551 - glucosyltransferase MdoH necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=VC1287 VC1288 VC1288 mdoG mdoG 1364570 1366207 - glucan biosynthesis protein G involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=VC1288 VC1289 VC1289 VC1289 1366600 1368495 + methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=VC1289 VC1290 VC1290 VC1290 1368634 1369344 - DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=VC1290 VC1291 VC1291 VC1291 1369341 1371254 - hypothetical protein gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=VC1291 VC1293 VC1293 VC1293 1371535 1372725 - aromatic amino acid aminotransferase catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=VC1293 VC1294 VC1294 VC1294 1372937 1373122 - hypothetical protein gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=VC1294 VC1295 VC1295 VC1295 1373094 1374572 - hypothetical protein gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=VC1295 VC1296 VC1296 VC1296 1375081 1375929 + phosphomethylpyrimidine kinase catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=VC1296 VC1297 VC1297 asnC asnC 1375995 1377395 - asparaginyl-tRNA synthetase 'catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA' gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=VC1297 VC1298 VC1298 VC1298 1377542 1379173 - methyl-accepting chemotaxis protein similar to GB:AL009126%3B identified by sequence similarity gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=VC1298 VC1299 VC1299 VC1299 1379571 1379939 + 6-pyruvoyl tetrahydrobiopterin synthase similar to PID:882658 GB:U00096 SP:Q46903 PID:1789124%3B identified by sequence similarity gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=VC1299 VC1300 VC1300 VC1300 1380028 1381389 - L-serine dehydratase 1 similar to GB:M28695 SP:P16095 PID:290464 GB:U00096 PID:1736451%3B identified by sequence similarity gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=VC1300 VC1301 VC1301 VC1301 1381482 1382735 - serine transporter similar to SP:P36559 GB:U01233 PID:402256 PID:882691 GB:U00096%3B identified by sequence similarity gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=VC1301 VC1302 VC1302 VC1302 1383034 1383648 - MutT/nudix family protein similar to SP:P43337 GB:U00096 PID:1788115%3B identified by sequence similarity gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=VC1302 VC1303 VC1303 VC1303 1383845 1385221 - para-aminobenzoate synthase component I catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=VC1303 VC1304 VC1304 VC1304 1385397 1386914 + fumarate hydratase%2C class I similar to GB:U00096 PID:1790564%3B identified by sequence similarity gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=VC1304 VC1305 VC1305 VC1305 1387063 1387248 + hypothetical protein gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=VC1305 VC1306 VC1306 VC1306 1387473 1388846 + hypothetical protein gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=VC1306 VC1307 VC1307 VC1307 1388843 1389861 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=VC1307 VC1308 VC1308 VC1308 1389975 1391516 + transcriptional regulator TyrR similar to GB:M12114 SP:P07604 PID:148092 GB:U00096 PID:1742168%3B identified by sequence similarity gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=VC1308 VC1309 VC1309 VC1309 1391516 1392091 + ribosomal-protein-alanine acetyltransferase similar to GB:M99278 SP:P09454 GB:X06118 PID:147655 PID:42744%3B identified by sequence similarity gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=VC1309 VC1310 VC1310 VC1310 1392186 1392659 + hypothetical protein gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=VC1310 VC1311 VC1311 VC1311 1392727 1393605 - hypothetical protein gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=VC1311 VC1312 VC1312 alr alr 1393726 1394949 - alanine racemase converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=VC1312 VC1313 VC1313 VC1313 1395061 1396692 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=VC1313 VC1314 VC1314 VC1314 1397026 1398489 + transporter similar to GB:AE000657%3B identified by sequence similarity gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=VC1314 VC1315 VC1315 VC1315 1398499 1399848 + sensor histidine kinase similar to SP:P26489 GB:X56658 GB:X59071 PID:38703 PID:38705%3B identified by sequence similarity gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=VC1315 VC1316 VC1316 VC1316 1399817 1400293 + chemotaxis protein CheY similar to GB:X61231 PID:45323 SP:Q51455%3B identified by sequence similarity gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=VC1316 VC1317 VC1317 VC1317 1400321 1401241 - hypothetical protein gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=VC1317 VC1318 VC1318 VC1318 1401339 1402112 - outer membrane protein OmpV similar to SP:P06111 PID:48372%3B identified by sequence similarity gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=VC1318 VC1319 VC1319 VC1319 1402325 1403647 - sensor histidine kinase similar to GB:M36795 SP:P08336 GB:X13307 PID:145590 PID:305015%3B identified by sequence similarity gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=VC1319 VC1320 VC1320 VC1320 1403673 1404377 - DNA-binding response regulator similar to PID:1079807 SP:P52108 GB:U00096 PID:1742647 PID:1742658%3B identified by sequence similarity gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=VC1320 VC1321 VC1321 VC1321 1404753 1407824 + hypothetical protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=VC1321 VC1322 VC1322 VC1322 1407905 1408120 - hypothetical protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=VC1322 VC1323 VC1323 VC1323 1408099 1408581 - hypothetical protein gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=VC1323 VC1325 VC1325 VC1325 1409080 1410054 + galactoside ABC transporter periplasmic D-galactose/D-glucose-binding protein similar to SP:P23905 GB:X52093%3B identified by sequence similarity gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=VC1325 VC1327 VC1327 VC1327 1410224 1411768 + galactose/methyl galaxtoside transporter ATP-binding protein with MglBC transports galactose or methyl galactoside into the cell%3B contains 2 ATP binding domains gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=VC1327 VC1328 VC1328 mglC mglC 1411773 1412786 + beta-methylgalactoside transporter inner membrane protein ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=VC1328 VC1329 VC1329 VC1329 1413196 1413834 + opacity protein-like protein similar to SP:Q04875 GB:X60710 GB:Z18929 PID:44900 PID:490167%3B identified by sequence similarity gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=VC1329 VC1330 VC1330 VC1330 1414155 1414982 + hypothetical protein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=VC1330 VC1332 VC1332 VC1332 1415133 1416662 - hypothetical protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=VC1332 VC1333 VC1333 VC1333 1416672 1417223 - hypothetical protein gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=VC1333 VC1334 VC1334 VC1334 1417421 1418392 - hypothetical protein gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=VC1334 VC1335 VC1335 VC1335 1419022 1419729 + GntR family transcriptional regulator similar to GB:U00096 PID:1787821%3B identified by sequence similarity gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=VC1335 VC1336 VC1336 prpB prpB 1419710 1420636 + 2-methylisocitrate lyase catalyzes the formation of pyruvate and succinate from 2-methylisocitrate gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=VC1336 VC1337 VC1337 VC1337 1420812 1421945 + methylcitrate synthase catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=VC1337 VC1338 VC1338 VC1338 1422041 1424647 + aconitate hydratase Catalyzes the conversion of citrate to isocitrate gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=VC1338 VC1339 VC1339 VC1339 1424656 1425858 + hypothetical protein gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=VC1339 VC1340 VC1340 VC1340 1425842 1427740 + prpE protein similar to GB:U00096 SP:P77495 PID:1657531 PID:1786529%3B identified by sequence similarity gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=VC1340 VC1341 VC1341 VC1341 1427914 1428390 + acetyltransferase similar to PID:1550710 GB:AL123456%3B identified by sequence similarity gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=VC1341 VC1342 VC1342 VC1342 1428471 1429868 + MutT/nudix family protein similar to SP:P32091 PID:298045%3B identified by sequence similarity gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=VC1342 VC1343 VC1343 VC1343 1429934 1431040 - M20A family peptidase similar to SP:P54542 PID:1303956 GB:AL009126%3B identified by sequence similarity gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=VC1343 VC1344 VC1344 VC1344 1431464 1432573 + 4-hydroxyphenylpyruvate dioxygenase similar to PID:2108220%3B identified by sequence similarity gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=VC1344 VC1345 VC1345 VC1345 1432566 1433702 + oxidoreductase similar to SP:Q00667 PID:984327%3B identified by sequence similarity gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=VC1345 VC1346 VC1346 VC1346 1433709 1434728 + hypothetical protein gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=VC1346 VC1347 VC1347 VC1347 1434725 1435372 + glutathione S-transferase similar to PID:2183249%3B identified by sequence similarity gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=VC1347 VC1348 VC1348 VC1348 1435354 1436493 - response regulator similar to PID:1653077%3B identified by sequence similarity gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=VC1348 VC1349 VC1349 VC1349 1436615 1440610 + sensory box sensor histidine kinase/response regulator similar to PID:1653075%3B identified by sequence similarity gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=VC1349 VC1350 VC1350 VC1350 1440716 1441189 - antioxidant similar to SP:P99029%3B identified by sequence similarity gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=VC1350 VC1353 VC1353 VC1353 1441840 1444770 + GGDEF family protein similar to GB:AE000657%3B identified by sequence similarity gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=VC1353 VC1354 VC1354 VC1354 1444812 1446005 - hypothetical protein gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=VC1354 VC1355 VC1355 VC1355 1446242 1446526 + acylphosphatase catalyzes the hydrolysis of acylphosphate gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=VC1355 VC1356 VC1356 VC1356 1446592 1446921 - sulfite reductase subunit gamma-like protein similar to SP:P45572 GB:U00096 PID:1787204%3B identified by sequence similarity gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=VC1356 VC1358 VC1358 VC1358 1447035 1447706 - hypothetical protein gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=VC1358 VC1359 VC1359 VC1359 1447951 1448706 - amino acid ABC transporter ATP-binding protein similar to PID:1154897%3B identified by sequence similarity gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=VC1359 VC1360 VC1360 VC1360 1448729 1449826 - amino acid ABC transporter permease similar to SP:P45768 PID:606211 GB:U00096 PID:1789671%3B identified by sequence similarity gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=VC1360 VC1361 VC1361 VC1361 1449829 1451034 - amino acid ABC transporter permease similar to PID:1154895%3B identified by sequence similarity gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=VC1361 VC1362 VC1362 VC1362 1451160 1452188 - amino acid ABC transporter substrate-binding protein similar to PID:1154894%3B identified by sequence similarity gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=VC1362 VC1363 VC1363 VC1363 1452643 1453581 + siroheme synthase component enzyme similar to PID:576655%3B identified by sequence similarity gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=VC1363 VC1364 VC1364 VC1364 1453647 1454468 - hypothetical protein gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=VC1364 VC1365 VC1365 VC1365 1454744 1455481 + hypothetical protein gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=VC1365 VC1366 VC1366 VC1366 1455494 1456189 + queuosine biosynthesis protein QueC 'YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His' gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=VC1366 VC1367 VC1367 VC1367 1456161 1458164 - GGDEF family protein similar to PID:633121%3B identified by sequence similarity gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=VC1367 VC1368 VC1368 VC1368 1458335 1458583 + hypothetical protein gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=VC1368 VC1369 VC1369 VC1369 1458740 1459756 + hypothetical protein gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=VC1369 VC1370 VC1370 VC1370 1459753 1461084 + GGDEF family protein similar to GB:U00096 PID:1787766 GB:U00096 PID:1787766%3B identified by sequence similarity gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=VC1370 VC1371 VC1371 VC1371 1461135 1461815 - hypothetical protein gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=VC1371 VC1372 VC1372 VC1372 1462189 1463367 + GGDEF family protein similar to GB:U00096 SP:P75908 PID:1787262%3B identified by sequence similarity gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=VC1372 VC1373 VC1373 VC1373 1463479 1466325 - molecular chaperone DnaK similar to SP:O32482%3B identified by sequence similarity gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=VC1373 VC1374 VC1374 VC1374 1466367 1468262 - molecular chaperone DnaK similar to SP:O32482%3B identified by sequence similarity gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=VC1374 VC1375 VC1375 VC1375 1468262 1468894 - hypothetical protein gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=VC1375 VC1376 VC1376 VC1376 1469402 1470967 + GGDEF family protein similar to PID:1652106%3B identified by sequence similarity gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=VC1376 VC1377 VC1377 VC1377 1471032 1471562 + hypothetical protein gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=VC1377 VC1379 VC1379 VC1379 1471848 1472312 - hypothetical protein gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=VC1379 VC1380 VC1380 VC1380 1472359 1472709 - hypothetical protein gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=VC1380 VC1382 VC1382 VC1382 1472998 1476840 + ATP-dependent RNA helicase HrpA 'involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain' gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=VC1382 VC1384 VC1384 VC1384 1476980 1477462 + hypothetical protein gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=VC1384 VC1386 VC1386 VC1386 1477679 1479031 + chaperone similar to SP:P36928 GB:U00096 PID:1788384%3B identified by sequence similarity gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=VC1386 VC1388 VC1388 lplA lplA 1479156 1480172 + lipoate-protein ligase A Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=VC1388 VC1389 VC1389 VC1389 1480408 1480587 + hypothetical protein gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=VC1389 VC1390 VC1390 VC1390 1480565 1481515 - LysR family transcriptional regulator similar to PID:1493807%3B identified by sequence similarity gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=VC1390 VC1391 VC1391 VC1391 1481602 1483008 + multidrug transporter similar to GB:AL009126%3B identified by sequence similarity gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=VC1391 VC1392 VC1392 VC1392 1483164 1484678 + deoxyribodipyrimidine photolyase similar to SP:P05327 GB:X07230%3B identified by sequence similarity gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=VC1392 VC1393 VC1393 VC1393 1484824 1485138 + sugE protein similar to SP:P20928 GB:X06151 PID:45911%3B identified by sequence similarity gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=VC1393 VC1394 VC1394 VC1394 1485193 1486428 - methyl-accepting chemotaxis protein similar to GB:AE000511 PID:2313186%3B identified by sequence similarity gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=VC1394 VC1395 VC1395 VC1395 1486436 1486815 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=VC1395 VC1396 VC1396 VC1396 1486808 1487068 - hypothetical protein gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=VC1396 VC1397 VC1397 VC1397 1487058 1489343 - chemotaxis protein CheA similar to PID:940147 SP:Q56310 GB:AE000512%3B identified by sequence similarity gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=VC1397 VC1398 VC1398 VC1398 1489340 1489714 - chemotaxis protein CheY similar to PID:2292999%3B identified by sequence similarity gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=VC1398 VC1399 VC1399 VC1399 1489689 1490555 - chemotaxis protein CheR similar to GB:M13463 SP:P07364 PID:145523 GB:U00096 PID:1736537%3B identified by sequence similarity gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=VC1399 VC1400 VC1400 VC1400 1490566 1491222 - hypothetical protein gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=VC1400 VC1401 VC1401 VC1401 1491209 1492285 - protein-glutamate methylesterase CheB similar to GB:M13463 SP:P07330 PID:145524 GB:U00096 PID:1736536%3B identified by sequence similarity gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=VC1401 VC1402 VC1402 VC1402 1492306 1493868 - purine-binding chemotaxis protein Chew similar to GB:AE000782%3B identified by sequence similarity gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=VC1402 VC1403 VC1403 VC1403 1493881 1495806 - methyl-accepting chemotaxis protein similar to GB:Pyro_h%3B identified by sequence similarity gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=VC1403 VC1405 VC1405 VC1405 1496398 1498089 + methyl-accepting chemotaxis protein similar to GB:X61367 PID:48195%3B identified by sequence similarity gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=VC1405 VC1406 VC1406 VC1406 1498168 1499484 + methyl-accepting chemotaxis protein similar to GB:X61367 PID:48195%3B identified by sequence similarity gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=VC1406 VC1407 VC1407 VC1407 1499666 1500859 + ATP-dependent RNA helicase RhlE similar to GP:3288677%3B identified by sequence similarity gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=VC1407 VC1408 VC1408 VC1408 1500918 1501520 - TetR family transcriptional regulator similar to GB:M97208 SP:P32398 PID:143046 PID:2226233 GB:AL009126%3B identified by sequence similarity gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=VC1408 VC1409 VC1409 VC1409 1501627 1503081 + multidrug resistance protein similar to GP:3378279%3B identified by sequence similarity gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=VC1409 VC1410 VC1410 VC1410 1503062 1504282 + multidrug resistance protein VceA similar to GP:3378278%3B identified by sequence similarity gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=VC1410 VC1411 VC1411 VC1411 1504292 1505827 + multidrug resistance protein VceB similar to GP:2815578%3B identified by sequence similarity gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=VC1411 VC1413 VC1413 VC1413 1505902 1507638 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=VC1413 VC1414 VC1414 VC1414 1507860 1509434 - thermostable carboxypeptidase 1 similar to SP:P42663 PID:992957%3B identified by sequence similarity gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=VC1414 VC1415 VC1415 VC1415 1509632 1510150 + hcp protein similar to GP:1488371%3B identified by sequence similarity gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=VC1415 VC1416 VC1416 VC1416 1510278 1513769 + VgrG protein similar to GP:2920640%3B identified by sequence similarity gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=VC1416 VC1417 VC1417 VC1417 1513748 1514608 + hypothetical protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=VC1417 VC1418 VC1418 VC1418 1514611 1516536 + hypothetical protein gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=VC1418 VC1419 VC1419 VC1419 1516533 1517276 + hypothetical protein gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=VC1419 VC1420 VC1420 VC1420 1517421 1518158 + hypothetical protein gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=VC1420 VC1421 VC1421 VC1421 1518246 1518884 + hypothetical protein gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=VC1421 VC1422 VC1422 VC1422 1518957 1520333 - sodium/alanine symporter similar to GB:L42023 SP:P44917 PID:1005967 PID:1220986 PID:1205130%3B identified by sequence similarity gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=VC1422 VC1422a VC1422a VC1422a 1520836 1520994 + membrane protein gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=VC1422a VC1423 VC1423 VC1423 1521011 1521745 + hypothetical protein gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=VC1423 VC1424 VC1424 VC1424 1521892 1522929 - spermidine/putrescine ABC transporter substrate-binding protein similar to GB:M64519 SP:P23861 PID:147329 GB:U00096 PID:1651550%3B identified by sequence similarity gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=VC1424 VC1425 VC1425 VC1425 1523041 1524072 - spermidine/putrescine ABC transporter substrate-binding protein similar to GB:M64519 SP:P23861 PID:147329 GB:U00096 PID:1651550%3B identified by sequence similarity gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=VC1425 VC1426 VC1426 potC potC 1524175 1524945 - spermidine/putrescine ABC transporter membrane protein can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=VC1426 VC1427 VC1427 potB potB 1524945 1525805 - spermidine/putrescine ABC transporter membrane protein can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotB is a membrane component gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=VC1427 VC1428 VC1428 potA potA 1525786 1526919 - putrescine/spermidine ABC transporter ATPase protein functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=VC1428 VC1429 VC1429 VC1429 1527205 1528050 + hypothetical protein gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=VC1429 VC1430 VC1430 VC1430 1528040 1528843 + bax protein similar to SP:P27297 PID:466708 GB:U00096 PID:1789994%3B identified by sequence similarity gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=VC1430 VC1431 VC1431 VC1431 1528845 1529504 + hypothetical protein gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=VC1431 VC1432 VC1432 VC1432 1529581 1530513 - C32 tRNA thiolase TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=VC1432 VC1433 VC1433 VC1433 1530639 1531586 - universal stress protein UspE with UspC and UspD is involved in resistance to UV irradiation gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=VC1433 VC1434 VC1434 VC1434 1531716 1532468 - fumarate/nitrate reduction transcriptional regulator Global transcription factor that controls the expression of over 100 target genes in response to anoxia gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=VC1434 VC1435 VC1435 VC1435 1532558 1533232 - hypothetical protein gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=VC1435 VC1436 VC1436 VC1436 1533229 1533393 - FixS-like protein similar to PID:2398785%3B identified by sequence similarity gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=VC1436 VC1437 VC1437 VC1437 1533397 1535769 - cation transporter E1-E2 family ATPase similar to PID:1200219%3B identified by sequence similarity gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=VC1437 VC1438 VC1438 VC1438 1535774 1536250 - hypothetical protein gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=VC1438 VC1439 VC1439 VC1439 1536329 1537309 - cytochrome c oxidase subunit CcoP similar to GB:Z21854 PID:49411%3B identified by sequence similarity gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=VC1439 VC1440 VC1440 VC1440 1537317 1537481 - cytochrome c oxidase subunit CcoQ similar to PID:1377867%3B identified by sequence similarity gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=VC1440 VC1441 VC1441 VC1441 1537493 1538113 - cbb3-type cytochrome c oxidase subunit II CcoO%3B FixO gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=VC1441 VC1442 VC1442 VC1442 1538127 1539560 - cbb3-type cytochrome c oxidase subunit I CcoN%3B FixN gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=VC1442 VC1443 VC1443 VC1443 1539789 1540169 + hypothetical protein gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=VC1443 VC1444 VC1444 VC1444 1540238 1541455 + hypothetical protein gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=VC1444 VC1445 VC1445 VC1445 1541452 1543170 + sensor histidine kinase/response regulator similar to PID:1653075%3B identified by sequence similarity gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=VC1445 VC1446 VC1446 VC1446 1543231 1545396 - toxin secretion transporter similar to SP:P16532 GB:M24197 PID:150495 PID:150514%3B identified by sequence similarity gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=VC1446 VC1447 VC1447 VC1447 1545399 1546802 - RTX toxin transporter similar to GP:4455068%3B identified by sequence similarity gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=VC1447 VC1448 VC1448 VC1448 1546757 1548919 - RTX toxin transporter similar to GP:4455067%3B identified by sequence similarity gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=VC1448 VC1449 VC1449 VC1449 1549277 1549636 + hypothetical protein gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=VC1449 VC1450 VC1450 VC1450 1549662 1550123 + RTX toxin activating protein similar to GB:M90440 PID:141827%3B identified by sequence similarity gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=VC1450 VC1451 VC1451 VC1451 1550108 1563784 + RTX toxin RtxA similar to GP:4455065%3B identified by sequence similarity gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=VC1451 VC1452 VC1452 VC1452 1564152 1564376 - RstC protein similar to GP:2564354%3B identified by sequence similarity gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=VC1452 VC1453 VC1453 VC1453 1564470 1564844 - RstB1 protein similar to GP:2564353%3B identified by sequence similarity gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=VC1453 VC1454 VC1454 VC1454 1564822 1565901 - RstA1 protein similar to GP:2564352%3B identified by sequence similarity gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=VC1454 VC1455 VC1455 VC1455 1566027 1566365 + transcriptional repressor RstR similar to GP:2564351%3B identified by sequence similarity gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=VC1455 VC1456 VC1456 VC1456 1566967 1567341 - cholera enterotoxin subunit B similar to GB:K01170 SP:P01556 GB:D30052 GB:D30053 GB:X58785%3B identified by sequence similarity gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=VC1456 VC1457 VC1457 VC1457 1567338 1568114 - cholera enterotoxin subunit A similar to SP:P01555 GB:D30052 GB:D30053 GB:K02679 GB:X58785%3B identified by sequence similarity gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=VC1457 VC1458 VC1458 VC1458 1568213 1569412 - zona occludens toxin similar to GB:M83563 SP:P38442 PID:155315%3B identified by sequence similarity gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=VC1458 VC1459 VC1459 VC1459 1569409 1569702 - accessory cholera enterotoxin similar to SP:P38441 GB:Z22569 PID:298062%3B identified by sequence similarity gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=VC1459 VC1460 VC1460 VC1460 1569699 1570982 - hypothetical protein gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=VC1460 VC1461 VC1461 VC1461 1570993 1571241 - colonization factor similar to %3B identified by sequence similarity gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=VC1461 VC1462 VC1462 VC1462 1571377 1571760 - RstB2 protein similar to GP:2564358%3B identified by sequence similarity gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=VC1462 VC1463 VC1463 VC1463 1571738 1572817 - RstA2 protein similar to GP:2564352%3B identified by sequence similarity gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=VC1463 VC1464 VC1464 VC1464 1572943 1573281 + transcriptional repressor RstR similar to GP:2564351%3B identified by sequence similarity gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=VC1464 VC1465 VC1465 VC1465 1573771 1574355 - hypothetical protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=VC1465 VC1466 VC1466 VC1466 1574348 1574515 - hypothetical protein gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=VC1466 VC1467 VC1467 VC1467 1574593 1575285 - hypothetical protein gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=VC1467 VC1468 VC1468 VC1468 1575415 1575699 - hypothetical protein gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=VC1468 VC1469 VC1469 VC1469 1575704 1577272 - phage replication protein Cri similar to GP:3220191%3B identified by sequence similarity gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=VC1469 VC1470 VC1470 VC1470 1577434 1578000 + XRE family transcriptional regulator gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=VC1470 VC1471 VC1471 VC1471 1579039 1579206 - hypothetical protein gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=VC1471 VC1472 VC1472 VC1472 1579199 1579366 - hypothetical protein gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=VC1472 VC1473 VC1473 VC1473 1579444 1580136 - hypothetical protein gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=VC1473 VC1474 VC1474 VC1474 1580266 1580550 - hypothetical protein gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=VC1474 VC1475 VC1475 VC1475 1580555 1582123 - phage replication protein Cri similar to GP:3220191%3B identified by sequence similarity gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=VC1475 VC1476 VC1476 VC1476 1582285 1582851 + XRE family transcriptional regulator gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=VC1476 VC1477 VC1477 VC1477 1583160 1583513 + transposase OrfAB subunit A similar to SP:P39213%3B identified by sequence similarity gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=VC1477 VC1478 VC1478 VC1478 1583510 1584382 + transposase OrfAB subunit B similar to GP:3337013%3B identified by sequence similarity gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=VC1478 VC1479 VC1479 VC1479 1585291 1585650 - hypothetical protein gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=VC1479 VC1480 VC1480 VC1480 1585761 1586093 - hypothetical protein gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=VC1480 VC1481 VC1481 VC1481 1586098 1586607 - hypothetical protein gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=VC1481 VC1482 VC1482 VC1482 1586564 1588360 + ATP-dependent protease LA-like protein similar to GB:U00096 PID:1787188%3B identified by sequence similarity gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=VC1482 VC1483 VC1483 VC1483 1588425 1588943 + 3-hydroxydecanoyl-ACP dehydratase 'catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP' gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=VC1483 VC1484 VC1484 VC1484 1589026 1589199 - ribosome modulation factor similar to SP:P22986 GB:X70111 PID:312770 GB:U00096 PID:1651464%3B identified by sequence similarity gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=VC1484 VC1485 VC1485 VC1485 1589366 1591060 - hypothetical protein gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=VC1485 VC1486 VC1486 VC1486 1591066 1592985 - ABC transporter ATPase Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=VC1486 VC1487 VC1487 VC1487 1592963 1593205 - hypothetical protein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=VC1487 VC1488 VC1488 rlmL rlmL 1593214 1595340 - 23S rRNA m(2)G2445 methyltransferase catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=VC1488 VC1490 VC1490 VC1490 1595800 1596342 - hypothetical protein gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=VC1490 VC1491 VC1491 VC1491 1596497 1597507 - dihydroorotate dehydrogenase 2 'catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors' gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=VC1491 VC1492 VC1492 VC1492 1597581 1602422 - hypothetical protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=VC1492 VC1493 VC1493 VC1493 1602611 1602847 - hypothetical protein gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=VC1493 VC1494 VC1494 pepN pepN 1602881 1605487 - aminopeptidase similar to GB:M15273 SP:P04825 GB:M15676 GB:X04020 PID:147142%3B identified by sequence similarity gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=VC1494 VC1495 VC1495 VC1495 1605686 1606402 - hypothetical protein gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=VC1495 VC1496 VC1496 VC1496 1606511 1608508 - carboxy-terminal protease Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=VC1496 VC1497 VC1497 VC1497 1608526 1609152 - solute/DNA competence effector affects solute and DNA transport through an unknown mechanism gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=VC1497 VC1498 VC1498 VC1498 1609253 1609831 - hypothetical protein gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=VC1498 VC1499 VC1499 VC1499 1609776 1611608 + ABC transporter ATP-binding protein similar to SP:P45861 PID:853754 GB:AL009126%3B identified by sequence similarity gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=VC1499 VC1500 VC1500 VC1500 1611642 1612901 + PqiA family protein similar to GB:U00096 PID:1736474 PID:1736480 PID:1788137%3B identified by sequence similarity gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=VC1500 VC1501 VC1501 VC1501 1612911 1615550 + hypothetical protein gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=VC1501 VC1502 VC1502 yebU yebU 1615581 1617092 + rRNA (cytosine-C(5)-)-methyltransferase RsmF in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=VC1502 VC1503 VC1503 VC1503 1617274 1618107 - hypothetical protein gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=VC1503 VC1505 VC1505 VC1505 1618209 1619557 + gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=VC1505 VC1506 VC1506 VC1506 1619550 1620026 - hypothetical protein gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=VC1506 VC1507 VC1507 VC1507 1620302 1621363 + phospho-2-dehydro-3-deoxyheptonate aldolase tryptophan sensitive%3B catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=VC1507 VC1508 VC1508 VC1508 1621375 1621857 + nucleotide-binding protein nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=VC1508 VC1509 VC1509 VC1509 1621992 1622771 - NAD-dependent deacetylase Modulates the activities of several enzymes which are inactive in their acetylated form gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=VC1509 VC1510 VC1510 VC1510 1622869 1623291 - hypothetical protein gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=VC1510 VC1511 VC1511 VC1511 1623278 1624351 - formate dehydrogenase cytochrome B556 subunit similar to GB:AE000657%3B identified by sequence similarity gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=VC1511 VC1512 VC1512 VC1512 1624352 1624960 - formate dehydrogenase iron-sulfur subunit similar to SP:P27273 PID:48508%3B identified by sequence similarity gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=VC1512 VC1513 VC1513 VC1513 1624972 1627826 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=VC1513 VC1514 VC1514 VC1514 1627838 1628035 - hypothetical protein gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=VC1514 VC1515 VC1515 VC1515 1628113 1628769 - formate dehydrogenase-specific chaperone similar to GP:3327032%3B identified by sequence similarity gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=VC1515 VC1516 VC1516 VC1516 1628795 1630456 - (Fe-S)-binding protein similar to GB:X61204 PID:44800 PID:1747410%3B identified by sequence similarity gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=VC1516 VC1517 VC1517 VC1517 1630655 1631320 - hypothetical protein gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=VC1517 VC1518 VC1518 VC1518 1631247 1631723 - hypothetical protein gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=VC1518 VC1519 VC1519 VC1519 1631948 1632781 + formate dehydrogenase accessory protein similar to GB:Z35277 SP:P39756 PID:580895 PID:1648855 GB:AL009126%3B identified by sequence similarity gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=VC1519 VC1520 VC1520 VC1520 1632888 1634480 - ABC transporter ATP-binding protein similar to GB:U00096 PID:1787041%3B identified by sequence similarity gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=VC1520 VC1521 VC1521 VC1521 1634692 1636725 - sensor histidine kinase similar to GB:L13078 SP:Q06067 PID:290419 GB:U00096 PID:1736874%3B identified by sequence similarity gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=VC1521 VC1522 VC1522 VC1522 1636715 1638169 - Fis family transcriptional regulator similar to SP:P14375 GB:M28369 PID:396343 PID:1790437%3B identified by sequence similarity gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=VC1522 VC1523 VC1523 VC1523 1638461 1639288 + hypothetical protein gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=VC1523 VC1524 VC1524 VC1524 1639295 1639993 + ABC transporter permease similar to GB:AE000666%3B identified by sequence similarity gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=VC1524 VC1525 VC1525 VC1525 1640002 1640724 + ABC transporter ATP-binding protein similar to GB:AE000782%3B identified by sequence similarity gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=VC1525 VC1526 VC1526 mobA mobA 1640678 1641289 + molybdopterin-guanine dinucleotide biosynthesis protein MobA in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=VC1526 VC1527 VC1527 VC1527 1641286 1643106 + bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA similar to GB:L42023 SP:P45210 PID:1007555 PID:1221592 PID:1205684%3B identified by sequence similarity gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=VC1527 VC1528 VC1528 VC1528 1643196 1643576 - gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=VC1528 VC1530 VC1530 VC1530 1643985 1644146 - hypothetical protein gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=VC1530 VC1531 VC1531 VC1531 1644190 1644465 + hypothetical protein gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=VC1531 VC1532 VC1532 VC1532 1644672 1645580 - N-acetyl-D-glucosamine kinase catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=VC1532 VC1533 VC1533 VC1533 1645743 1646480 - hypothetical protein gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=VC1533 VC1534 VC1534 VC1534 1646580 1647371 + hypothetical protein gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=VC1534 VC1535 VC1535 VC1535 1647373 1649395 - gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=VC1535 VC1537 VC1537 VC1537 1649484 1649984 + lipoprotein NlpC similar to GB:M14031 SP:P23898 PID:145446 GB:U00096 PID:1742788%3B identified by sequence similarity gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=VC1537 VC1538 VC1538 VC1538 1649994 1650335 - hypothetical protein gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=VC1538 VC1539 VC1539 VC1539 1650858 1651724 + hypothetical protein gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=VC1539 VC1539a VC1539a VC1539a 1651882 1652085 + hypothetical protein gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=VC1539a VC1540 VC1540 VC1540 1652340 1653713 + multidrug efflux protein NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=VC1540 VC1541 VC1541 VC1541 1653917 1654900 + hypothetical protein gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=VC1541 VC1542 VC1542 VC1542 1654907 1655755 - DNA ligase catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=VC1542 VC1543 VC1543 VC1543 1656062 1657240 - hypothetical protein gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=VC1543 VC1544 VC1544 VC1544 1657237 1657857 - TonB2 protein similar to GB:K00431 SP:P02929 PID:148023 PID:902383 PID:902392%3B identified by sequence similarity gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=VC1544 VC1545 VC1545 VC1545 1657857 1658261 - TonB system transport protein ExbD2 similar to PID:1651675%3B identified by sequence similarity gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=VC1545 VC1546 VC1546 VC1546 1658258 1658800 - TonB system transport protein ExbB2 similar to GB:L42023 SP:P43008 PID:1003404 PID:1222176 PID:1204510%3B identified by sequence similarity gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=VC1546 VC1547 VC1547 VC1547 1658807 1660180 - biopolymer transport protein ExbB-like protein similar to PID:1001734 PID:1001752%3B identified by sequence similarity gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=VC1547 VC1548 VC1548 VC1548 1660180 1660938 - hypothetical protein gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=VC1548 VC1549 VC1549 VC1549 1661257 1662561 + glycerol-3-phosphate ABC transporter substrate-binding protein similar to SP:P10904 GB:U00039 GB:M33735 PID:43244 PID:466589%3B identified by sequence similarity gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=VC1549 VC1550 VC1550 VC1550 1662637 1663518 + glycerol-3-phosphate ABC transporter permease similar to SP:P10905 GB:U00039 PID:43247 PID:466588 GB:U00096%3B identified by sequence similarity gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=VC1550 VC1551 VC1551 VC1551 1663528 1664370 + glycerol-3-phosphate ABC transporter permease similar to SP:P10906 GB:U00039 PID:43248 PID:466587 GB:U00096%3B identified by sequence similarity gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=VC1551 VC1552 VC1552 ugpC ugpC 1664360 1665541 + glycerol-3-phosphate transporter ATP-binding subunit part of the UgpABCE glycerol-3-phosphate uptake system gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=VC1552 VC1553 VC1553 VC1553 1665566 1666327 + glycerol-3-phosphate regulon repressor similar to SP:P09392 GB:M96795 PID:146186 PID:606358 GB:U00096%3B identified by sequence similarity gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=VC1553 VC1554 VC1554 VC1554 1666355 1667068 + glycerophosphoryl diester phosphodiesterase similar to SP:P54527 PID:1303930 GB:AL009126%3B identified by sequence similarity gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=VC1554 VC1555 VC1555 VC1555 1667144 1667656 - hypothetical protein gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=VC1555 VC1556 VC1556 VC1556 1667625 1667987 - hypothetical protein gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=VC1556 VC1557 VC1557 VC1557 1668122 1669156 - LacI family transcription regulator similar to PID:882607 GB:U00096 PID:1789068%3B identified by sequence similarity gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=VC1557 VC1558 VC1558 VC1558 1669192 1670628 - 6-phospho-beta-glucosidase similar to PID:887851 GB:U00096 SP:Q46829 PID:2367174%3B identified by sequence similarity gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=VC1558 VC1560 VC1560 VC1560 1671041 1673215 + catalase/peroxidase similar to SP:P14412 GB:M29876 PID:143310%3B identified by sequence similarity gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=VC1560 VC1561 VC1561 VC1561 1673280 1674209 - LysR family transcriptional regulator similar to SP:P10183 PID:150233%3B identified by sequence similarity gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=VC1561 VC1562 VC1562 VC1562 1674273 1675445 + beta-lactamase-like protein similar to GB:M19530 SP:P04190 SP:P14488 PID:143128%3B identified by sequence similarity gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=VC1562 VC1563 VC1563 VC1563 1675622 1676752 + gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=VC1563 VC1565 VC1565 VC1565 1676745 1678004 + outer membrane protein TolC similar to SP:P02930 GB:X54049 PID:43101 PID:43107 PID:882565%3B identified by sequence similarity gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=VC1565 VC1566 VC1566 VC1566 1678004 1679218 + hypothetical protein gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=VC1566 VC1567 VC1567 VC1567 1679222 1680499 + hypothetical protein gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=VC1567 VC1568 VC1568 VC1568 1680499 1681200 + ABC transporter ATP-binding protein similar to GB:AL009126%3B identified by sequence similarity gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=VC1568 VC1570 VC1570 VC1570 1681274 1682266 - quinol oxidase subunit II similar to GP:3550333%3B identified by sequence similarity gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=VC1570 VC1571 VC1571 VC1571 1682263 1683600 - quinol oxidase subunit I similar to GP:3550332%3B identified by sequence similarity gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=VC1571 VC1572 VC1572 VC1572 1684123 1684503 + hypothetical protein gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=VC1572 VC1573 VC1573 fumC fumC 1684519 1685904 + fumarate hydratase class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=VC1573 VC1574 VC1574 VC1574 1686049 1686432 - hypothetical protein gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=VC1574 VC1575 VC1575 VC1575 1686477 1686935 - hypothetical protein gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=VC1575 VC1576 VC1576 VC1576 1686965 1687282 - hypothetical protein gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=VC1576 VC1577 VC1577 VC1577 1687438 1688259 - hypothetical protein gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=VC1577 VC1578 VC1578 VC1578 1688261 1688497 - hypothetical protein gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=VC1578 VC1579 VC1579 VC1579 1688481 1690151 - enterobactin synthetase subunit F similar to GB:M60177 SP:P11454 GB:M17354 PID:145843 PID:551801%3B identified by sequence similarity gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=VC1579 VC1580 VC1580 VC1580 1690215 1691126 - LysR family transcriptional regulator similar to GB:X66866 PID:403331 SP:P52692%3B identified by sequence similarity gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=VC1580 VC1581 VC1581 VC1581 1691206 1692756 + NADH dehydrogenase subunit L Catalyzes the transfer of electrons from NADH to ubiquinone gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=VC1581 VC1582 VC1582 VC1582 1692681 1695269 + hypothetical protein gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=VC1582 VC1583 VC1583 VC1583 1695314 1695829 - superoxide dismutase similar to SP:P00446 PID:150711%3B identified by sequence similarity gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=VC1583 VC1584 VC1584 VC1584 1695869 1696435 - AnkB protein similar to PID:563740 PID:1754534%3B identified by sequence similarity gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=VC1584 VC1585 VC1585 VC1585 1696499 1698010 - catalase similar to PID:1015384 SP:Q59635 PID:1881697%3B identified by sequence similarity gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=VC1585 VC1587 VC1587 VC1587 1698457 1698897 + hypothetical protein gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=VC1587 VC1588 VC1588 VC1588 1699073 1699954 - LysR family transcriptional regulator similar to PID:727227 SP:P52666%3B identified by sequence similarity gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=VC1588 VC1589 VC1589 VC1589 1700060 1700845 + alpha-acetolactate decarboxylase similar to SP:P05361 PID:148345%3B identified by sequence similarity gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=VC1589 VC1590 VC1590 VC1590 1700984 1702687 + acetolactate synthase catalyzes the formation of 2-acetolactate from pyruvate in stationary phase gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=VC1590 VC1591 VC1591 VC1591 1702684 1703442 + short chain dehydrogenase/reductase family oxidoreductase similar to SP:Q11020 PID:1419053 GB:AL123456%3B identified by sequence similarity gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=VC1591 VC1592 VC1592 VC1592 1703680 1704534 + hypothetical protein gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=VC1592 VC1593 VC1593 VC1593 1704617 1705906 + GGDEF family protein similar to GB:AE000657%3B identified by sequence similarity gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=VC1593 VC1594 VC1594 galM galM 1705924 1706955 - aldose 1-epimerase 'catalyzes the conversion of alpha-aldose to the beta-anomer%3B active on D-glucose%2C L-arabinose%2C D-xylose%2C D-galactose%2C maltose and lactose%3B links the metabolism of lactose and galactose' gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=VC1594 VC1595 VC1595 VC1595 1706985 1708202 - galactokinase catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=VC1595 VC1596 VC1596 VC1596 1708211 1709275 - galactose-1-phosphate uridylyltransferase catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=VC1596 VC1597 VC1597 VC1597 1709719 1711152 - multidrug transporter similar to PID:1217600%3B identified by sequence similarity gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=VC1597 VC1598 VC1598 VC1598 1711301 1712125 + ABC transporter substrate-binding protein-like protein similar to GB:L42023 PID:1006358 PID:1221197 PID:1205330 SP:P45024%3B identified by sequence similarity gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=VC1598 VC1599 VC1599 VC1599 1712741 1713802 + GGDEF family protein similar to GB:U00096 SP:P75908 PID:1787262%3B identified by sequence similarity gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=VC1599 VC1600 VC1600 VC1600 1713805 1714494 - hypothetical protein gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=VC1600 VC1601 VC1601 VC1601 1714609 1715412 - hypothetical protein gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=VC1601 VC1602 VC1602 VC1602 1715544 1716530 - chemotaxis protein CheV similar to SP:P37599 GB:U05345 GB:Z29584 PID:453378 PID:580837%3B identified by sequence similarity gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=VC1602 VC1603 VC1603 VC1603 1716549 1717325 - hypothetical protein gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=VC1603 VC1604 VC1604 VC1604 1717391 1718077 - response regulator similar to GB:AL009126%3B identified by sequence similarity gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=VC1604 VC1605 VC1605 VC1605 1718077 1719693 - sensor kinase citA similar to PID:924991 SP:P52687%3B identified by sequence similarity gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=VC1605 VC1605a VC1605a VC1605a 1720022 1720255 + hypothetical protein gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=VC1605a VC1606 VC1606 VC1606 1720423 1721853 + hypothetical protein gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=VC1606 VC1607 VC1607 VC1607 1721865 1722839 + hypothetical protein gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=VC1607 VC1608 VC1608 VC1608 1722843 1724006 + hypothetical protein gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=VC1608 VC1609 VC1609 VC1609 1724003 1725151 + hypothetical protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=VC1609 VC1610 VC1610 VC1610 1725155 1725604 - hypothetical protein gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=VC1610 VC1611 VC1611 VC1611 1725652 1726611 + homoserine O-succinyltransferase catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=VC1611 VC1612 VC1612 VC1612 1726820 1727533 + fimbrial biogenesis and twitching motility protein similar to PID:1162960%3B identified by sequence similarity gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=VC1612 VC1613 VC1613 VC1613 1727537 1727761 - hypothetical protein gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=VC1613 VC1614 VC1614 VC1614 1727960 1729048 - SAM-dependent methyltransferase gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=VC1614 VC1615 VC1615 VC1615 1729045 1729557 - hypothetical protein gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=VC1615 VC1616 VC1616 VC1616 1729725 1729958 + glutaredoxin similar to GB:M60116 SP:P23171 PID:144907%3B identified by sequence similarity gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=VC1616 VC1617 VC1617 VC1617 1729989 1730879 - LysR family transcriptional regulator similar to GB:X73124 SP:P39592 PID:413948 GB:AL009126%3B identified by sequence similarity gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=VC1617 VC1618 VC1618 VC1618 1730964 1732181 + multidrug resistance protein similar to SP:P43531 GB:U00096 PID:1742619 PID:1742630 PID:1787880%3B identified by sequence similarity gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=VC1618 VC1619 VC1619 VC1619 1732238 1732786 + hypothetical protein gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=VC1619 VC1620 VC1620 VC1620 1732896 1741367 - 'This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact.' gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=VC1620 VC1621 VC1621 VC1621 1741764 1743101 + agglutination protein similar to GB:M64540 PID:150976%3B identified by sequence similarity gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=VC1621 VC1622 VC1622 VC1622 1743103 1743741 + hypothetical protein similar to GB:M18975 SP:P13794 GB:M94078 PID:151409 PID:151508%3B identified by sequence similarity gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=VC1622 VC1623 VC1623 VC1623 1743877 1745040 - carboxynorspermidine decarboxylase similar to GB:D31783 PID:498170%3B identified by sequence similarity gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=VC1623 VC1624 VC1624 VC1624 1745276 1746520 - hypothetical protein gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=VC1624 VC1625 VC1625 VC1625 1746534 1749418 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=VC1625 VC1627 VC1627 nhaA nhaA 1750016 1751164 - pH-dependent sodium/proton antiporter exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=VC1627 VC1628 VC1628 VC1628 1751443 1752561 - hypothetical protein gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=VC1628 VC1629 VC1629 VC1629 1752562 1755072 - hypothetical protein gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=VC1629 VC1630 VC1630 VC1630 1754996 1755679 - ABC transporter ATP-binding protein similar to GB:AE000782%3B identified by sequence similarity gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=VC1630 VC1631 VC1631 VC1631 1755793 1757169 - hypothetical protein gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=VC1631 VC1632 VC1632 VC1632 1757297 1758733 + hypothetical protein gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=VC1632 VC1633 VC1633 VC1633 1758800 1759537 - hypothetical protein gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=VC1633 VC1634 VC1634 VC1634 1759459 1760664 - bicyclomycin/multidrug efflux system Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=VC1634 VC1635 VC1635 VC1635 1760983 1761678 - ribosomal small subunit pseudouridine synthase A similar to SP:P33918 PID:405907 GB:U00096 PID:1788510%3B identified by sequence similarity gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=VC1635 VC1636 VC1636 VC1636 1761812 1763596 + helicase-like protein similar to SP:P36927 GB:U00096%3B identified by sequence similarity gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=VC1636 VC1637 VC1637 VC1637 1763861 1764268 + hypothetical protein gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=VC1637 VC1638 VC1638 VC1638 1764280 1764939 + DNA-binding response regulator similar to PID:929822%3B identified by sequence similarity gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=VC1638 VC1639 VC1639 VC1639 1764914 1766302 + sensor histidine kinase similar to PID:929823%3B identified by sequence similarity gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=VC1639 VC1640 VC1640 VC1640 1766460 1766738 + 50S ribosomal protein L25 'the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response' gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=VC1640 VC1641 VC1641 VC1641 1766888 1767661 - hypothetical protein gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=VC1641 VC1642 VC1642 VC1642 1767753 1768154 - hypothetical protein gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=VC1642 VC1643 VC1643 VC1643 1768345 1770135 + methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=VC1643 VC1644 VC1644 VC1644 1770467 1771711 + hypothetical protein gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=VC1644 VC1645 VC1645 VC1645 1771809 1772438 - hypothetical protein gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=VC1645 VC1646 VC1646 VC1646 1772606 1772809 - hypothetical protein gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=VC1646 VC1647 VC1647 VC1647 1773000 1774763 + hypothetical protein gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=VC1647 VC1649 VC1649 VC1649 1774844 1776490 - serine protease similar to SP:P26262 PID:200359%3B identified by sequence similarity gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=VC1649 VC1650 VC1650 VC1650 1776818 1779274 + collagenase similar to GP:4426893%3B identified by sequence similarity gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=VC1650 VC1651 VC1651 VC1651 1779308 1780969 - response regulator VieB similar to GP:3123892%3B identified by sequence similarity gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=VC1651 VC1652 VC1652 VC1652 1780981 1782735 - response regulator VieA similar to GP:3123891%3B identified by sequence similarity gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=VC1652 VC1653 VC1653 VC1653 1782740 1786270 - sensory box sensor histidine kinase/response regulator VieS similar to GP:3123890%3B identified by sequence similarity gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=VC1653 VC1655 VC1655 VC1655 1786971 1788326 + magnesium transporter similar to GP:3123889%3B identified by sequence similarity gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=VC1655 VC1656 VC1656 VC1656 1788409 1789272 - hypothetical protein gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=VC1656 VC1658 VC1658 VC1658 1789608 1790861 + serine transporter similar to SP:P36559 GB:U01233 PID:402256 PID:882691 GB:U00096%3B identified by sequence similarity gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=VC1658 VC1659 VC1659 VC1659 1791030 1791977 + hypothetical protein gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=VC1659 VC1660 VC1660 VC1660 1792910 1794007 + ABC transporter ATP-binding protein gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=VC1660 VC1660a VC1660a VC1660a 1791987 1792913 + ABC transporter permease gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=VC1660a VC1661 VC1661 VC1661 1794166 1794387 + hypothetical protein gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=VC1661 VC1662 VC1662 VC1662 1794393 1794659 - hypothetical protein gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=VC1662 VC1663 VC1663 VC1663 1794806 1795249 + heat shock protein HslJ similar to SP:P52644 GB:U00096 PID:1742252 PID:1742258 PID:1787644%3B identified by sequence similarity gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=VC1663 VC1664 VC1664 VC1664 1795457 1796605 + ABC transporter substrate-binding protein similar to GB:U00096 PID:1788051%3B identified by sequence similarity gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=VC1664 VC1665 VC1665 VC1665 1796619 1798319 + ABC transporter permease similar to GB:U00096 PID:1742865 PID:1788052%3B identified by sequence similarity gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=VC1665 VC1666 VC1666 VC1666 1798285 1798947 + ABC transporter ATP-binding protein similar to GB:U00096 PID:1742866 PID:1788053%3B identified by sequence similarity gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=VC1666 VC1667 VC1667 VC1667 1798940 1799560 + hypothetical protein gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=VC1667 VC1668 VC1668 VC1668 1799619 1800326 - pseudouridine synthase similar to GB:L42023 SP:P43930 PID:1004184 PID:1221947 PID:1204300%3B identified by sequence similarity gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=VC1668 VC1669 VC1669 VC1669 1800425 1801771 - sodium-dependent transporter similar to GB:AL009126%3B identified by sequence similarity gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=VC1669 VC1670 VC1670 cls cls 1802327 1803781 + cardiolipin synthetase catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol) gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=VC1670 VC1671 VC1671 VC1671 1803862 1805052 + cystathionine beta-lyase catalyzes the formation of L-homocysteine from cystathionine gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=VC1671 VC1672 VC1672 VC1672 1805139 1805720 - DNA-3-methyladenine glycosidase I similar to SP:P05100 GB:J02606 GB:X03845 PID:147920 PID:43030%3B identified by sequence similarity gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=VC1672 VC1673 VC1673 VC1673 1805807 1808920 - AcrB/AcrD/AcrF family transporter similar to GB:AE000657%3B identified by sequence similarity gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=VC1673 VC1674 VC1674 VC1674 1808898 1810007 - periplasmic linker protein similar to GP:2605916%3B identified by sequence similarity gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=VC1674 VC1675 VC1675 VC1675 1809979 1811010 - multidrug resistance protein similar to GB:L11616 PID:438853 SP:P52477%3B identified by sequence similarity gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=VC1675 VC1676 VC1676 VC1676 1811182 1811598 - phage shock protein C similar to SP:P23855 GB:X57560 PID:42541 GB:U00096 PID:1742136%3B identified by sequence similarity gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=VC1676 VC1677 VC1677 pspB pspB 1811564 1811797 - phage shock protein B 'acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding' gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=VC1677 VC1678 VC1678 VC1678 1811811 1812479 - phage shock protein A similar to SP:P23853 GB:X57560 PID:42539 GB:U00096 PID:1742134%3B identified by sequence similarity gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=VC1678 VC1679 VC1679 VC1679 1812689 1813705 + psp operon transcriptional activator similar to SP:P37344 PID:1209663 GB:U00096 PID:1742133 PID:1742142%3B identified by sequence similarity gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=VC1679 VC1680 VC1680 VC1680 1813819 1815441 + peptide ABC transporter substrate-binding protein similar to SP:P36634 GB:X52093 GB:X74212 PID:414208%3B identified by sequence similarity gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=VC1680 VC1681 VC1681 VC1681 1815441 1816403 + peptide ABC transporter permease similar to GB:U00096 SP:Q47623 PID:1279401 PID:1742106 PID:1742115%3B identified by sequence similarity gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=VC1681 VC1682 VC1682 VC1682 1816390 1817277 + peptide ABC transporter permease similar to SP:P36669 GB:X74212 PID:414210%3B identified by sequence similarity gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=VC1682 VC1683 VC1683 VC1683 1817277 1818272 + peptide ABC transporter ATP-binding protein similar to SP:P36635 GB:U08190 PID:470682 GB:U00096 PID:1279403%3B identified by sequence similarity gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=VC1683 VC1684 VC1684 VC1684 1818269 1819057 + peptide ABC transporter ATP-binding protein similar to SP:P36637 GB:U08190 PID:470683 GB:U00096 PID:1279404%3B identified by sequence similarity gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=VC1684 VC1685 VC1685 VC1685 1819058 1819828 + hypothetical protein gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=VC1685 VC1686 VC1686 VC1686 1819865 1820254 - hypothetical protein gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=VC1686 VC1687 VC1687 VC1687 1820389 1821294 - manganese-dependent inorganic pyrophosphatase catalyzes the hydrolysis of pyrophosphate to phosphate gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=VC1687 VC1688 VC1688 VC1688 1821441 1822688 + hypothetical protein gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=VC1688 VC1689 VC1689 VC1689 1822752 1824488 - gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=VC1689 VC1692 VC1692 VC1692 1824695 1827157 - trimethylamine-N-oxide reductase similar to GP:3327031%3B identified by sequence similarity gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=VC1692 VC1693 VC1693 VC1693 1827181 1828365 - cytochrome c-type protein TorC similar to GP:3413832%3B identified by sequence similarity gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=VC1693 VC1694 VC1694 VC1694 1828412 1828630 - nitrate reductase protein NapE similar to GP:3445371%3B identified by sequence similarity gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=VC1694 VC1695 VC1695 VC1695 1829274 1830116 - formate transporter 1 similar to SP:P21501 PID:147154 GB:U00096 PID:1651428 PID:1651435%3B identified by sequence similarity gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=VC1695 VC1696 VC1696 VC1696 1830468 1830701 + DNA-binding protein similar to SP:P41136 PID:1030074%3B identified by sequence similarity gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=VC1696 VC1697 VC1697 VC1697 1830805 1831635 + hypothetical protein gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=VC1697 VC1698 VC1698 VC1698 1831628 1832275 + hypothetical protein gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=VC1698 VC1699 VC1699 VC1699 1832408 1832677 + hypothetical protein gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=VC1699 VC1700 VC1700 VC1700 1832906 1833451 + intracellular septation protein A Involved in cell division%3B probably involved in intracellular septation gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=VC1700 VC1701 VC1701 VC1701 1833589 1834029 + hypothetical protein gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=VC1701 VC1702 VC1702 VC1702 1834104 1834400 + hypothetical protein 'unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity' gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=VC1702 VC1703 VC1703 VC1703 1834309 1834800 + hypothetical protein gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=VC1703 VC1704 VC1704 VC1704 1835075 1837360 - 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=VC1704 VC1706 VC1706 VC1706 1837756 1838673 + transcriptional activator MetR similar to GB:M17356 SP:P05984 PID:154177%3B identified by sequence similarity gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=VC1706 VC1707 VC1707 VC1707 1838680 1838883 - hypothetical protein gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=VC1707 VC1708 VC1708 VC1708 1838997 1839683 - hypothetical protein gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=VC1708 VC1709 VC1709 VC1709 1839907 1842675 + zinc protease similar to SP:P31828 GB:X71917 PID:535004 GB:U00096 PID:1742451%3B identified by sequence similarity gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=VC1709 VC1710 VC1710 VC1710 1842809 1845265 - hypothetical protein gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=VC1710 VC1711 VC1711 VC1711 1845545 1847914 + hypothetical protein gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=VC1711 VC1712 VC1712 VC1712 1847962 1848576 - hypothetical protein gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=VC1712 VC1713 VC1713 VC1713 1848654 1849097 + AsnC family transcriptional regulator similar to PID:1816639%3B identified by sequence similarity gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=VC1713 VC1714 VC1714 mukB mukB 1849179 1853654 - cell division protein MukB SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=VC1714 VC1715 VC1715 VC1715 1853651 1854394 - condesin subunit E acts with MukB and MukF to condense the chromosome and allow for segregation during cell division gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=VC1715 VC1716 VC1716 VC1716 1854354 1855691 - condesin subunit F acts with MukB and MukE to condense the chromosome and allow for segregation during cell division gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=VC1716 VC1717 VC1717 VC1717 1855703 1856485 - metallothionein SmtA involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens%3B expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc%3B NO elicits release of Zn ions from SmtA gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=VC1717 VC1718 VC1718 VC1718 1856575 1857423 + hypothetical protein gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=VC1718 VC1719 VC1719 VC1719 1857523 1858227 - DNA-binding transcriptional regulator TorR response regulator in two-component regulatory system with TorS%3B involved in regulation of trimethylamine N-oxide reductase genes gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=VC1719 VC1720 VC1720 torD torD 1858452 1859114 + chaperone protein TorD 'TorD%3B involved in the biogenesis of torA%3B acts on torA before the insertion of the molybdenum cofactor and%2C as a result%2C probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor' gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=VC1720 VC1721 VC1721 VC1721 1859521 1860531 + LacI family transcription regulator similar to PID:1574481%3B identified by sequence similarity gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=VC1721 VC1722 VC1722 VC1722 1860890 1861477 + hypothetical protein gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=VC1722 VC1723 VC1723 VC1723 1861832 1862521 + hypothetical protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=VC1723 VC1724 VC1724 VC1724 1862555 1862866 + hypothetical protein gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=VC1724 VC1725 VC1725 VC1725 1862871 1863689 - beta-ketoadipate enol-lactone hydrolase similar to GB:L05770 PID:141779%3B identified by sequence similarity gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=VC1725 VC1726 VC1726 glgA glgA 1863877 1865331 - glycogen synthase 'catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose' gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=VC1726 VC1727 VC1727 glgC glgC 1865333 1866550 - glucose-1-phosphate adenylyltransferase catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=VC1727 VC1730 VC1730 VC1730 1867219 1869849 - DNA topoisomerase I 'catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity' gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=VC1730 VC1731 VC1731 VC1731 1870186 1870434 + hypothetical protein gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=VC1731 VC1732 VC1732 VC1732 1870525 1871805 - 3-phosphoshikimate 1-carboxyvinyltransferase catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=VC1732 VC1733 VC1733 VC1733 1871809 1872012 + hypothetical protein gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=VC1733 VC1735 VC1735 aat aat 1872072 1872803 + leucyl/phenylalanyl-tRNA--protein transferase 'leucyltransferase%3B phenylalanyltransferse%3B functions in the N-end rule pathway%3B transfers Leu%2C Phe%2C Met%2C from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys' gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=VC1735 VC1736 VC1736 VC1736 1872807 1873508 + arginyl-tRNA-protein transferase Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=VC1736 VC1737 VC1737 infA infA 1873592 1873810 + translation initiation factor IF-1 'stimulates the activities of the other two initiation factors%2C IF-2 and IF-3' gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=VC1737 VC1738 VC1738 VC1738 1874120 1875318 - gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=VC1738 VC1740 VC1740 VC1740 1875517 1877799 - acyl-CoA dehydrogenase functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=VC1740 VC1741 VC1741 VC1741 1877855 1878529 - TetR family transcriptional regulator similar to GB:D28504 PID:551300%3B identified by sequence similarity gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=VC1741 VC1743 VC1743 VC1743 1879014 1879925 + hypothetical protein gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=VC1743 VC1744 VC1744 VC1744 1879970 1880251 + hypothetical protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=VC1744 VC1745 VC1745 VC1745 1880232 1881698 - succinate-semialdehyde dehydrogenase similar to GB:M88334 SP:P25526 PID:147901 GB:U00096 PID:1789015%3B identified by sequence similarity gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=VC1745 VC1746 VC1746 VC1746 1881716 1882345 - TetR family transcriptional regulator similar to PID:868019 GB:U00096 SP:Q59431 PID:1742672 PID:1742680%3B identified by sequence similarity gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=VC1746 VC1748 VC1748 VC1748 1882572 1883396 + hypothetical protein gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=VC1748 VC1749 VC1749 VC1749 1883296 1884522 + hypothetical protein gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=VC1749 VC1750 VC1750 VC1750 1884533 1885654 + hypothetical protein gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=VC1750 VC1751 VC1751 VC1751 1885670 1887379 - hypothetical protein gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=VC1751 VC1753 VC1753 VC1753 1887601 1888905 + paraquat-inducible protein A similar to GB:U00096 PID:1651462 PID:1787183%3B identified by sequence similarity gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=VC1753 VC1754 VC1754 VC1754 1888902 1890545 + paraquat-inducible protein B similar to SP:P43671 PID:695515 GB:U00096 PID:1651463 PID:1787184%3B identified by sequence similarity gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=VC1754 VC1755 VC1755 VC1755 1890542 1891120 + hypothetical protein gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=VC1755 VC1756 VC1756 VC1756 1891336 1892430 + periplasmic linker protein similar to GP:2605916%3B identified by sequence similarity gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=VC1756 VC1757 VC1757 VC1757 1892430 1895480 + AcrB/AcrD/AcrF family transporter similar to GB:AL009126%3B identified by sequence similarity gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=VC1757 VC1758 VC1758 VC1758 1896092 1897327 + phage family integrase similar to GB:U02372 PID:498253 PID:1100883%3B identified by sequence similarity gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=VC1758 VC1759 VC1759 VC1759 1897402 1897878 + 'This region contains a match to at least one other gene that is not full length%2Cand is not the result of a sequencing artifact.' gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=VC1759 VC1760 VC1760 VC1760 1898009 1901459 - gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=VC1760 VC1762 VC1762 VC1762 1901450 1902901 - hypothetical protein gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=VC1762 VC1763 VC1763 VC1763 1902898 1903632 - chemotaxis protein MotB-like protein similar to GB:AE000657%3B identified by sequence similarity gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=VC1763 VC1764 VC1764 VC1764 1903625 1905745 - hypothetical protein gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=VC1764 VC1765 VC1765 VC1765 1905790 1908858 - type I restriction enzyme HsdR similar to GB:M63891 PID:551948%3B identified by sequence similarity gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=VC1765 VC1766 VC1766 VC1766 1908886 1910877 - hypothetical protein gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=VC1766 VC1767 VC1767 VC1767 1910870 1912282 - hypothetical protein gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=VC1767 VC1768 VC1768 VC1768 1912283 1913671 - hypothetical protein gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=VC1768 VC1769 VC1769 VC1769 1913628 1916009 - DNA methylase HsdM similar to GB:AL123456%3B identified by sequence similarity gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=VC1769 VC1770 VC1770 VC1770 1916150 1918213 - hypothetical protein gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=VC1770 VC1771 VC1771 VC1771 1918195 1921857 - hypothetical protein gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=VC1771 VC1772 VC1772 VC1772 1921885 1922745 + hypothetical protein gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=VC1772 VC1773 VC1773 VC1773 1922810 1923880 - hypothetical protein gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=VC1773 VC1774 VC1774 VC1774 1923895 1925049 - N-acetylneuraminic acid mutarotase gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=VC1774 VC1775 VC1775 VC1775 1925231 1926067 - hypothetical protein gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=VC1775 VC1776 VC1776 VC1776 1926196 1927092 - N-acetylneuraminate lyase similar to GB:L42023 SP:P44539 PID:1003186 PID:1222055 PID:1204400%3B identified by sequence similarity gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=VC1776 VC1777 VC1777 VC1777 1927130 1928413 - hypothetical protein gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=VC1777 VC1778 VC1778 VC1778 1928421 1928942 - hypothetical protein gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=VC1778 VC1779 VC1779 VC1779 1928993 1929958 - C4-dicarboxylate-binding protein similar to GB:L42023 SP:P44542 PID:1003193 PID:1222059 PID:1204403%3B identified by sequence similarity gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=VC1779 VC1780 VC1780 VC1780 1929989 1930282 + hypothetical protein gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=VC1780 VC1781 VC1781 VC1781 1930173 1930895 + N-acetylmannosamine-6-phosphate 2-epimerase Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=VC1781 VC1782 VC1782 VC1782 1930883 1931746 + N-acetylmannosamine kinase catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=VC1782 VC1783 VC1783 VC1783 1931750 1932886 + N-acetylglucosamine-6-phosphate deacetylase similar to SP:O32445%3B identified by sequence similarity gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=VC1783 VC1784 VC1784 VC1784 1933231 1935654 + neuraminidase similar to GB:M83562 SP:P37060 GB:M19268 PID:155242%3B identified by sequence similarity gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=VC1784 VC1785 VC1785 VC1785 1935801 1936007 - transcriptional regulator similar to PID:1196729%3B identified by sequence similarity gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=VC1785 VC1786 VC1786 VC1786 1936121 1936597 + DNA repair protein RadC similar to PID:1208991 GB:U00096 PID:1552815 PID:2367100%3B identified by sequence similarity gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=VC1786 VC1788 VC1788 VC1788 1936827 1937522 - hypothetical protein gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=VC1788 VC1789 VC1789 VC1789 1937519 1938391 - transposase OrfAB subunit B similar to GP:3337013%3B identified by sequence similarity gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=VC1789 VC1790 VC1790 VC1790 1938388 1938732 - transposase OrfAB subunit A similar to SP:P39213%3B identified by sequence similarity gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=VC1790 VC1791 VC1791 VC1791 1938739 1939779 - hypothetical protein gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=VC1791 VC1792 VC1792 VC1792 1939914 1940273 - hypothetical protein gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=VC1792 VC1793 VC1793 VC1793 1940322 1940699 - hypothetical protein gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=VC1793 VC1794 VC1794 VC1794 1940754 1941332 - hypothetical protein gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=VC1794 VC1795 VC1795 VC1795 1941351 1941671 - transcriptional regulator similar to SP:P06022 PID:15812 PID:215521 PID:215582%3B identified by sequence similarity gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=VC1795 VC1796 VC1796 VC1796 1941658 1942032 - middle operon regulator-like protein similar to SP:P23848 PID:215576%3B identified by sequence similarity gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=VC1796 VC1797 VC1797 VC1797 1942842 1943303 - hypothetical protein gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=VC1797 VC1798 VC1798 VC1798 1943306 1944457 - eha protein similar to GP:3746932%3B identified by sequence similarity gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=VC1798 VC1799 VC1799 VC1799 1944387 1946144 - hypothetical protein gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=VC1799 VC1800 VC1800 VC1800 1946151 1947122 - hypothetical protein gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=VC1800 VC1801 VC1801 VC1801 1947461 1947823 - hypothetical protein gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=VC1801 VC1802 VC1802 VC1802 1947786 1948022 - hypothetical protein gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=VC1802 VC1803 VC1803 VC1803 1948112 1948573 + hypothetical protein gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=VC1803 VC1804 VC1804 VC1804 1948800 1949114 + hypothetical protein gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=VC1804 VC1805 VC1805 VC1805 1949165 1949611 + hypothetical protein gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=VC1805 VC1806 VC1806 VC1806 1949718 1950704 + hypothetical protein gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=VC1806 VC1807 VC1807 VC1807 1950739 1951379 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=VC1807 VC1808 VC1808 VC1808 1951671 1952516 + hypothetical protein gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=VC1808 VC1809 VC1809 VC1809 1952631 1952861 - transcriptional regulator similar to SP:P12552 PID:15163 PID:15171%3B identified by sequence similarity gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=VC1809 VC1810 VC1810 VC1810 1953461 1953664 + hypothetical protein gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=VC1810 VC1811 VC1811 VC1811 1953656 1954129 - hypothetical protein gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=VC1811 VC1812 VC1812 VC1812 1954253 1954672 - hypothetical protein gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=VC1812 VC1814 VC1814 VC1814 1954789 1956174 + deoxyribodipyrimidine photolyase similar to PID:1652848%3B identified by sequence similarity gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=VC1814 VC1815 VC1815 VC1815 1956171 1956878 + C factor cell-cell signaling protein similar to PID:1652815%3B identified by sequence similarity gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=VC1815 VC1816 VC1816 VC1816 1956889 1957104 - hypothetical protein gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=VC1816 VC1817 VC1817 VC1817 1957201 1958964 - Fis family transcriptional regulator similar to GB:M90471 SP:P28614 PID:141888%3B identified by sequence similarity gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=VC1817 VC1819 VC1819 VC1819 1959245 1960765 + aldehyde dehydrogenase similar to GB:M60658 SP:P23240 PID:155276%3B identified by sequence similarity gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=VC1819 VC1820 VC1820 VC1820 1961098 1961538 + PTS system fructose-specific transporter subunit IIA similar to SP:P32155 GB:X60472 PID:396682 PID:305004 GB:U00096%3B identified by sequence similarity gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=VC1820 VC1821 VC1821 VC1821 1961550 1962953 + PTS system fructose-specific transporter subunit IIBC similar to SP:P32672 GB:U00006 PID:396296 GB:U00096 PID:1790386%3B identified by sequence similarity gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=VC1821 VC1822 VC1822 VC1822 1963028 1964893 - PTS system fructose-specific transporter subunit IIABC similar to GB:AL009126%3B identified by sequence similarity gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=VC1822 VC1823 VC1823 VC1823 1965110 1965409 + PTS system fructose-specific transporter subunit IIB similar to SP:P32673 GB:U00006 PID:396297 GB:U00096 PID:1790387%3B identified by sequence similarity gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=VC1823 VC1824 VC1824 VC1824 1965418 1966197 + PTS system nitrogen regulatory subunit IIA similar to GB:U00096 PID:1788726 PID:1799794%3B identified by sequence similarity gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=VC1824 VC1825 VC1825 VC1825 1966189 1967028 - transcriptional regulator similar to GB:U00096 PID:1788725%3B identified by sequence similarity gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=VC1825 VC1826 VC1826 VC1826 1967400 1969301 + PTS system fructose-specific transporter subunit IIABC similar to GB:AL009126%3B identified by sequence similarity gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=VC1826 VC1827 VC1827 VC1827 1969417 1970583 + mannose-6-phosphate isomerase similar to GB:M15380 SP:P00946 PID:146722 GB:U00096 PID:1742663%3B identified by sequence similarity gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=VC1827 VC1828 VC1828 VC1828 1970703 1971155 - hypothetical protein gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=VC1828 VC1831 VC1831 VC1831 1971491 1973701 - sensor histidine kinase similar to GB:U07069 PID:459205 SP:P54302%3B identified by sequence similarity gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=VC1831 VC1832 VC1832 VC1832 1973909 1974481 + hypothetical protein gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=VC1832 VC1833 VC1833 VC1833 1974555 1975616 - quinolinate synthetase 3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=VC1833 VC1834 VC1834 VC1834 1975790 1976554 - hypothetical protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=VC1834 VC1835 VC1835 VC1835 1976570 1977088 - peptidoglycan-associated lipoprotein similar to SP:P07176 PID:41360 PID:42257 GB:U00096 PID:1651333%3B identified by sequence similarity gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=VC1835 VC1836 VC1836 tolB tolB 1977120 1978472 - translocation protein TolB forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=VC1836 VC1837 VC1837 VC1837 1978487 1979557 - TolA protein similar to GB:M28232 SP:P19934 PID:148019 GB:U00096 PID:1651331%3B identified by sequence similarity gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=VC1837 VC1838 VC1838 VC1838 1979575 1980015 - TolR membrane protein similar to PID:1103861 SP:P50599%3B identified by sequence similarity gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=VC1838 VC1839 VC1839 VC1839 1980018 1980701 - TolQ protein similar to SP:P05828 PID:1128978 GB:U00096 PID:1651329 PID:1786958%3B identified by sequence similarity gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=VC1839 VC1840 VC1840 VC1840 1980691 1981158 - hypothetical protein gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=VC1840 VC1841 VC1841 VC1841 1981267 1981584 - hypothetical protein gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=VC1841 VC1842 VC1842 VC1842 1981577 1981684 - hypothetical protein gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=VC1842 VC1843 VC1843 VC1843 1981697 1982833 - cytochrome d ubiquinol oxidase subunit II similar to GB:J03939 SP:P11027 PID:145640 GB:U00096 PID:1651328%3B identified by sequence similarity gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=VC1843 VC1844 VC1844 VC1844 1982851 1984476 - cytochrome d ubiquinol oxidase subunit I similar to PID:1926318%3B identified by sequence similarity gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=VC1844 VC1845 VC1845 ruvB ruvB 1984896 1985900 - Holliday junction DNA helicase RuvB promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=VC1845 VC1846 VC1846 ruvA ruvA 1985956 1986570 - Holliday junction DNA helicase RuvA plays an essential role in ATP-dependent branch migration of the Holliday junction gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=VC1846 VC1847 VC1847 ruvC ruvC 1986667 1987188 - Holliday junction resolvase endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=VC1847 VC1848 VC1848 cysS cysS 1987276 1988655 - cysteinyl-tRNA synthetase catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=VC1848 VC1849 VC1849 VC1849 1988801 1989295 + peptidyl-prolyl cis-trans isomerase B similar to GB:M55430 SP:P23869 GB:X59293 PID:145290 PID:41205%3B identified by sequence similarity gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=VC1849 VC1850 VC1850 VC1850 1989336 1990064 + UDP-2%2C3-diacylglucosamine hydrolase 'catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine' gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=VC1850 VC1851 VC1851 VC1851 1990171 1991385 + hypothetical protein gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=VC1851 VC1852 VC1852 VC1852 1991447 1991902 + hypothetical protein gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=VC1852 VC1853 VC1853 VC1853 1991934 1992608 - hypothetical protein gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=VC1853 VC1854 VC1854 VC1854 1992727 1993833 - porin similar to GP:3377759%3B identified by sequence similarity gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=VC1854 VC1855 VC1855 dinG dinG 1994271 1996346 + ATP-dependent DNA helicase DinG helicase involved in DNA repair and perhaps also replication gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=VC1855 VC1856 VC1856 VC1856 1996384 1997163 + hypothetical protein gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=VC1856 VC1857 VC1857 VC1857 1997148 1997711 + primosomal replication protein N`` similar to GB:D13958 PID:912452 GB:U00096 PID:1773149 PID:1786673%3B identified by sequence similarity gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=VC1857 VC1858 VC1858 VC1858 1997712 1997924 + hypothetical protein gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=VC1858 VC1859 VC1859 VC1859 1997948 2000068 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=VC1859 VC1860 VC1860 VC1860 2000266 2001072 + exonuclease III removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=VC1860 VC1861 VC1861 VC1861 2001131 2001808 - amino acid ABC transporter permease similar to SP:P20091 GB:Y00455 PID:41704 GB:U00096 PID:1788645%3B identified by sequence similarity gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=VC1861 VC1862 VC1862 VC1862 2001811 2002593 - amino acid ABC transporter permease similar to PID:1166637 SP:P52094 GB:U00096 PID:1788646 PID:1799689%3B identified by sequence similarity gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=VC1862 VC1863 VC1863 VC1863 2002699 2003481 - amino acid ABC transporter substrate-binding protein similar to PID:1166635 GB:U00096 PID:1788649 PID:1799691%3B identified by sequence similarity gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=VC1863 VC1864 VC1864 VC1864 2003660 2004430 - amino acid ABC transporter ATP-binding protein similar to SP:P07109 GB:Y00455 PID:41705 GB:U00096 PID:1788644%3B identified by sequence similarity gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=VC1864 VC1865 VC1865 VC1865 2005135 2006688 + hypothetical protein gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=VC1865 VC1866 VC1866 VC1866 2006954 2009230 + formate acetyltransferase similar to GB:X08035 SP:P09373 PID:42370 GB:U00096 PID:1651427%3B identified by sequence similarity gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=VC1866 VC1867 VC1867 VC1867 2009366 2010394 + hypothetical protein gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=VC1867 VC1868 VC1868 VC1868 2010412 2012292 - methyl-accepting chemotaxis protein similar to PID:1066851%3B identified by sequence similarity gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=VC1868 VC1869 VC1869 pflA pflA 2012625 2013365 + pyruvate formate lyase-activating enzyme 1 activates pyruvate formate-lyase 1 under anaerobic conditions gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=VC1869 VC1870 VC1870 VC1870 2013431 2014093 + hypothetical protein gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=VC1870 VC1871 VC1871 VC1871 2014214 2014714 + hypothetical protein gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=VC1871 VC1872 VC1872 VC1872 2014955 2016889 + hypothetical protein gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=VC1872 VC1873 VC1873 VC1873 2017034 2018305 + hypothetical protein gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=VC1873 VC1874 VC1874 VC1874 2018318 2019868 + SpoVR family protein gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=VC1874 VC1875 VC1875 VC1875 2019953 2020711 - 3-deoxy-manno-octulosonate cytidylyltransferase CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=VC1875 VC1876 VC1876 VC1876 2020711 2020890 - hypothetical protein gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=VC1876 VC1877 VC1877 lpxK lpxK 2020871 2021881 - tetraacyldisaccharide 4'-kinase 'transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate' gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=VC1877 VC1878 VC1878 VC1878 2021881 2023629 - lipid transporter ATP-binding/permease involved in the transport of lipid A across the inner membrane gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=VC1878 VC1879 VC1879 VC1879 2023660 2025918 - Rec2-like protein similar to GB:L42023 SP:P44408 PID:1003026 PID:1221968 PID:1204319%3B identified by sequence similarity gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=VC1879 VC1880 VC1880 VC1880 2025912 2026442 + hypothetical protein gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=VC1880 VC1882 VC1882 VC1882 2026557 2027801 - outer membrane-specific lipoprotein transporter subunit LolE part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=VC1882 VC1883 VC1883 VC1883 2027802 2028488 - ABC transporter ATP-binding protein similar to GB:L42023 SP:P45247 PID:1007753 PID:1221696 PID:1205784%3B identified by sequence similarity gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=VC1883 VC1884 VC1884 VC1884 2028481 2029701 - hypothetical protein gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=VC1884 VC1885 VC1885 VC1885 2029865 2030440 + hypothetical protein gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=VC1885 VC1886 VC1886 VC1886 2030443 2033910 + transcription-repair coupling factor similar to SP:P30958 GB:U00096 PID:1651547 PID:1651549 PID:1787357%3B identified by sequence similarity gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=VC1886 VC1887 VC1887 VC1887 2034050 2034850 + hypothetical protein gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=VC1887 VC1888 VC1888 VC1888 2035185 2037260 + hemolysin-like protein similar to SP:P09545 GB:M36855 GB:X51746 PID:1136779 PID:155182%3B identified by sequence similarity gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=VC1888 VC1889 VC1889 VC1889 2037545 2038081 + ribosomal-protein-serine acetyltransferase similar to SP:P13857 GB:X15860 PID:42749 GB:U00096 PID:1742324%3B identified by sequence similarity gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=VC1889 VC1890 VC1890 VC1890 2038194 2039498 - NADH dehydrogenase similar to SP:P00393 PID:581140 GB:U00096 PID:1651546 PID:1787352%3B identified by sequence similarity gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=VC1890 VC1892 VC1892 VC1892 2039841 2040380 - hypothetical protein gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=VC1892 VC1893 VC1893 VC1893 2040560 2041420 - hypothetical protein gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=VC1893 VC1894 VC1894 VC1894 2041448 2042038 - hypothetical protein gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=VC1894 VC1895 VC1895 VC1895 2042091 2042480 - hypothetical protein gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=VC1895 VC1896 VC1896 VC1896 2042480 2043898 - hypothetical protein gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=VC1896 VC1897 VC1897 VC1897 2043911 2044261 - Hit family protein similar to GB:U00096 PID:1787346%3B identified by sequence similarity gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=VC1897 VC1898 VC1898 VC1898 2044494 2046512 + methyl-accepting chemotaxis protein similar to GB:X61367 PID:48195%3B identified by sequence similarity gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=VC1898 VC1899 VC1899 VC1899 2046682 2047833 + hypothetical protein gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=VC1899 VC1900 VC1900 VC1900 2048068 2048907 - fatty acid metabolism regulator Multifunctional regulator of fatty acid metabolism gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=VC1900 VC1901 VC1901 nhaB nhaB 2049552 2051144 + sodium/proton antiporter involved in regulation of intracellular pH under alkaline conditions gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=VC1901 VC1902 VC1902 VC1902 2051224 2051745 + disulfide bond formation protein B disulfide oxidoreductase%3B integral membrane protein%3B required for perioplasmic disulfide bond formation%3B oxidizes DsbA protein gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=VC1902 VC1903 VC1903 VC1903 2051820 2054702 - DNA translocase FtsK similar to SP:P46889 PID:1004225 GB:U00096 PID:1651412 PID:1651418%3B identified by sequence similarity gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=VC1903 VC1904 VC1904 VC1904 2054880 2055374 - leucine-responsive transcriptional regulator mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=VC1904 VC1905 VC1905 VC1905 2055531 2056655 + alanine dehydrogenase similar to GP:3220269%3B identified by sequence similarity gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=VC1905 VC1906 VC1906 VC1906 2056697 2057893 - hypothetical protein gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=VC1906 VC1907 VC1907 cysB cysB 2057955 2058929 - transcriptional regulator CysB LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=VC1907 VC1909 VC1909 VC1909 2059194 2059982 + hypothetical protein gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=VC1909 VC1910 VC1910 VC1910 2060044 2060820 + tRNA-(MS[2]IO[6]A)-hydroxylase similar to SP:Q08015 PID:312708%3B identified by sequence similarity gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=VC1910 VC1911 VC1911 VC1911 2060878 2061573 - orotidine 5'-phosphate decarboxylase type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=VC1911 VC1912 VC1912 VC1912 2061646 2062815 - hypothetical protein gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=VC1912 VC1913 VC1913 VC1913 2062827 2063108 - hypothetical protein gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=VC1913 VC1914 VC1914 ihfB ihfB 2063247 2063525 - integration host factor subunit beta 'This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control' gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=VC1914 VC1915 VC1915 rpsA rpsA 2063813 2065483 - 30S ribosomal protein S1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=VC1915 VC1916 VC1916 cmk cmk 2065592 2066281 - cytidylate kinase Catalyzes the formation of (d)CDP from ATP and (d)CMP gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=VC1916 VC1917 VC1917 VC1917 2066452 2066763 - hypothetical protein gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=VC1917 VC1918 VC1918 VC1918 2066898 2068757 - peptidyl-prolyl cis-trans isomerse D similar to GB:U00096 SP:P77241 PID:1580712 PID:1773125 PID:1786645%3B identified by sequence similarity gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=VC1918 VC1919 VC1919 VC1919 2068910 2069182 - DNA-binding protein HU-beta similar to SP:P05515 GB:X07844 PID:581767%3B identified by sequence similarity gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=VC1919 VC1920 VC1920 VC1920 2069366 2071726 - ATP-dependent protease LA similar to PID:1655939%3B identified by sequence similarity gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=VC1920 VC1921 VC1921 clpX clpX 2071849 2073129 - ATP-dependent protease ATP-binding subunit ClpX binds and unfolds substrates as part of the ClpXP protease gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=VC1921 VC1922 VC1922 clpP clpP 2073209 2073811 - ATP-dependent Clp protease proteolytic subunit 'hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates' gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=VC1922 VC1923 VC1923 tig tig 2073941 2075242 - trigger factor Tig%3B RopA%3B peptidyl-prolyl cis/trans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=VC1923 VC1924 VC1924 VC1924 2075349 2075768 + hypothetical protein gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=VC1924 VC1925 VC1925 VC1925 2075741 2077534 + C4-dicarboxylate transport sensor protein similar to SP:P10047 GB:X06253 GB:Z11529 PID:46179 PID:46182%3B identified by sequence similarity gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=VC1925 VC1926 VC1926 VC1926 2077537 2078877 + C4-dicarboxylate transport transcriptional regulator similar to GB:J03683 SP:P13632 GB:M26531 PID:152160 PID:152173%3B identified by sequence similarity gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=VC1926 VC1927 VC1927 VC1927 2078993 2080354 - C4-dicarboxylate transport protein similar to GP:2224837%3B identified by sequence similarity gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=VC1927 VC1928 VC1928 VC1928 2080358 2081056 - C4-dicarboxylate transport protein DctQ similar to GP:2224836%3B identified by sequence similarity gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=VC1928 VC1929 VC1929 VC1929 2081087 2082085 - C4-dicarboxylate-binding protein similar to SP:P37735 GB:X63974 PID:46006%3B identified by sequence similarity gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=VC1929 VC1931 VC1931 VC1931 2082317 2083843 - hypothetical protein gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=VC1931 VC1932 VC1932 VC1932 2084014 2084184 - hypothetical protein gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=VC1932 VC1933 VC1933 VC1933 2084346 2084816 + hypothetical protein gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=VC1933 VC1934 VC1934 VC1934 2084780 2086747 + GGDEF family protein similar to GP:3341566%3B identified by sequence similarity gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=VC1934 VC1935 VC1935 VC1935 2086892 2087584 + CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase-like protein similar to GB:U00096 PID:1787676%3B identified by sequence similarity gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=VC1935 VC1936 VC1936 VC1936 2087587 2088519 + phosphatidate cytidylyltransferase similar to GB:U00096 PID:1742297 PID:1742302 PID:1787677%3B identified by sequence similarity gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=VC1936 VC1937 VC1937 VC1937 2088527 2089198 + hypothetical protein gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=VC1937 VC1938 VC1938 VC1938 2089288 2089737 + hypothetical protein gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=VC1938 VC1939 VC1939 VC1939 2090031 2090651 + hypothetical protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=VC1939 VC1940 VC1940 VC1940 2090698 2091360 - hypothetical protein gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=VC1940 VC1941 VC1941 VC1941 2091673 2092968 - hypothetical protein gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=VC1941 VC1942 VC1942 VC1942 2093523 2094458 + bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase 'catalyzes the formation of 5%2C10-methenyltetrahydrofolate from 5%2C10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5%2C10-methenyltetrahydrofolate' gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=VC1942 VC1944 VC1944 VC1944 2094741 2095604 + pyoverdine biosynthesis protein PvcB similar to GP:3212173%3B identified by sequence similarity gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=VC1944 VC1945 VC1945 VC1945 2095589 2097052 + hypothetical protein similar to SP:P15245 PID:170525%3B identified by sequence similarity gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=VC1945 VC1947 VC1947 VC1947 2097183 2098112 - LysR family transcriptional regulator similar to GB:L42023 SP:P43011 PID:1007393 PID:1221499 PID:1139588%3B identified by sequence similarity gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=VC1947 VC1948 VC1948 VC1948 2098271 2098462 + hypothetical protein gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=VC1948 VC1949 VC1949 VC1949 2098432 2100258 + pyoverdine biosynthesis protein PvcA similar to GP:3212172%3B identified by sequence similarity gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=VC1949 VC1950 VC1950 VC1950 2100348 2102795 - biotin sulfoxide reductase similar to SP:P46923 PID:1045667 GB:U00096 PID:1736518 PID:1736526%3B identified by sequence similarity gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=VC1950 VC1951 VC1951 VC1951 2102818 2103924 - cytochrome c-type protein YecK similar to SP:P52005 GB:U00096 PID:1736519 PID:1736527 PID:1788181%3B identified by sequence similarity gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=VC1951 VC1952 VC1952 VC1952 2104179 2106719 - chitinase similar to GP:3851166%3B identified by sequence similarity gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=VC1952 VC1953 VC1953 VC1953 2106983 2108200 - NupC family protein similar to GB:L42023 SP:P44742 PID:1003922 PID:1222453 PID:1204770%3B identified by sequence similarity gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=VC1953 VC1955 VC1955 VC1955 2108531 2109478 - LysR family transcriptional regulator similar to PID:1652912%3B identified by sequence similarity gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=VC1955 VC1956 VC1956 VC1956 2109642 2110613 - lytic murein transglycosylase similar to PID:1944158%3B identified by sequence similarity gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=VC1956 VC1957 VC1957 VC1957 2110638 2110946 - hypothetical protein gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=VC1957 VC1959 VC1959 minC minC 2111116 2111778 + septum formation inhibitor blocks the formation of polar Z-ring septums gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=VC1959 VC1960 VC1960 VC1960 2111781 2112611 + septum site-determining protein MinD similar to GB:J03153 SP:P18197 PID:146867 GB:U00096 PID:1651574%3B identified by sequence similarity gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=VC1960 VC1961 VC1961 minE minE 2112616 2112879 + cell division topological specificity factor MinE works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=VC1961 VC1962 VC1962 VC1962 2113168 2113659 + lipoprotein similar to GB:M74825 SP:P29722 PID:155048 GB:AE000520%3B identified by sequence similarity gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=VC1962 VC1963 VC1963 VC1963 2113726 2114049 - hypothetical protein gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=VC1963 VC1964 VC1964 VC1964 2114204 2115079 - hypothetical protein gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=VC1964 VC1965 VC1965 VC1965 2115273 2115863 + hypothetical protein gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=VC1965 VC1966 VC1966 VC1966 2115867 2117747 + hypothetical protein gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=VC1966 VC1967 VC1967 VC1967 2117923 2119977 + methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=VC1967 VC1968 VC1968 VC1968 2120030 2120575 - transcriptional regulator similar to GB:U00096 SP:P77626 PID:1742340 PID:1742346 PID:1787704%3B identified by sequence similarity gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=VC1968 VC1970 VC1970 VC1970 2120663 2121826 + benzoate transport protein similar to GB:M76990 SP:P07775 PID:141751%3B identified by sequence similarity gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=VC1970 VC1971 VC1971 VC1971 2121855 2123285 - O-succinylbenzoic acid--CoA ligase similar to GB:L35031 SP:P37353 PID:520813 GB:U00096 PID:1788595%3B identified by sequence similarity gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=VC1971 VC1972 VC1972 VC1972 2123261 2124259 - O-succinylbenzoate synthase 'catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate' gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=VC1972 VC1973 VC1973 VC1973 2124347 2125213 - naphthoate synthase 'catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA' gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=VC1973 VC1974 VC1974 VC1974 2125238 2126029 - acyl-CoA thioester hydrolase catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=VC1974 VC1975 VC1975 VC1975 2126019 2127731 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=VC1975 VC1976 VC1976 VC1976 2127728 2129035 - menaquinone-specific isochorismate synthase synthesizes isochorismate acid from chorismate gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=VC1976 VC1977 VC1977 VC1977 2129250 2130464 + aminotransferase 'broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor' gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=VC1977 VC1978 VC1978 VC1978 2130617 2131201 + hypothetical protein gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=VC1978 VC1979 VC1979 VC1979 2131258 2132583 + deoxyguanosinetriphosphate triphosphohydrolase-like protein dGTPase family type 2 subfamily%3B presumably hydrolyzes dGTP to deoxyguanosine and triphosphate gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=VC1979 VC1980 VC1980 VC1980 2132577 2133179 - hypothetical protein gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=VC1980 VC1981 VC1981 VC1981 2133183 2133734 + hypothetical protein gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=VC1981 VC1983 VC1983 VC1983 2133810 2135657 - peptidase similar to SP:P47788 PID:1871406 PID:565284%3B identified by sequence similarity gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=VC1983 VC1984 VC1984 VC1984 2135870 2137015 - ribonuclease D similar to SP:P09155 GB:X07055 GB:X70994 PID:581071 PID:581215%3B identified by sequence similarity gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=VC1984 VC1985 VC1985 VC1985 2137101 2138801 - long-chain-fatty-acid--CoA ligase Activates fatty acids by binding to coenzyme A gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=VC1985 VC1986 VC1986 VC1986 2138926 2139780 - hypothetical protein gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=VC1986 VC1987 VC1987 VC1987 2139777 2140385 - outer membrane lipoprotein Slp similar to GB:U00096 PID:1736439 PID:1736445 PID:1788108%3B identified by sequence similarity gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=VC1987 VC1988 VC1988 VC1988 2140351 2140656 - hypothetical protein gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=VC1988 VC1989 VC1989 VC1989 2140716 2141429 - hypothetical protein gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=VC1989 VC1990 VC1990 VC1990 2141426 2143366 - ATP-dependent helicase DinG similar to GB:U00096 PID:1736441 PID:1736447 PID:1788110%3B identified by sequence similarity gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=VC1990 VC1991 VC1991 VC1991 2143320 2143757 + hypothetical protein gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=VC1991 VC1992 VC1992 purU purU 2143931 2144764 + formyltetrahydrofolate deformylase produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis%3B has a role in one-carbon metabolism%3B forms a homohexamer%3B activated by methionine and inhibited by glycine gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=VC1992 VC1993 VC1993 VC1993 2144838 2146838 - 2%2C4-dienoyl-CoA reductase similar to SP:P42593 PID:606019 GB:U00096 PID:1789463%3B identified by sequence similarity gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=VC1993 VC1994 VC1994 VC1994 2147068 2148918 + endopeptidase IV similar to GB:M13359 SP:P08395 GB:U13772 GB:U13773 GB:U13774%3B identified by sequence similarity gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=VC1994 VC1995 VC1995 ansA ansA 2149035 2150048 + asparaginase I converts asparagine to aspartate and ammonia gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=VC1995 VC1996 VC1996 VC1996 2150146 2150433 - hypothetical protein gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=VC1996 VC1997 VC1997 VC1997 2150537 2151361 + hypothetical protein gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=VC1997 VC1998 VC1998 VC1998 2151522 2151965 - methionine sulfoxide reductase B this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form%3B provides protection against oxidative stress gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=VC1998 VC2000 VC2000 VC2000 2152265 2153260 + glyceraldehyde-3-phosphate dehydrogenase catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=VC2000 VC2001 VC2001 VC2001 2153408 2154298 + hypothetical protein gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=VC2001 VC2002 VC2002 VC2002 2154733 2155737 + hypothetical protein gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=VC2002 VC2003 VC2003 rrmA rrmA 2155892 2156710 + 23S rRNA methyltransferase methylates the guanosine in position 745 of 23S rRNA%3B required for translation and cell growth gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=VC2003 VC2004 VC2004 VC2004 2156731 2157708 + hypothetical protein gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=VC2004 VC2005 VC2005 VC2005 2157848 2158204 + hypothetical protein gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=VC2005 VC2006 VC2006 VC2006 2158278 2159222 - chemotaxis protein CheV similar to GB:AE000511 PID:2313494%3B identified by sequence similarity gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=VC2006 VC2007 VC2007 VC2007 2159327 2160544 - ROK family transcriptional regulator similar to PID:971264 SP:P50456 GB:U00096 PID:1549225 PID:1742617%3B identified by sequence similarity gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=VC2007 VC2008 VC2008 VC2008 2160989 2162434 + pyruvate kinase II similar to GB:M63703 SP:P21599 GB:M87660 PID:147459 PID:146878%3B identified by sequence similarity gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=VC2008 VC2009 VC2009 VC2009 2162476 2163645 - hypothetical protein gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=VC2009 VC2011 VC2011 VC2011 2163877 2164467 + hypothetical protein gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=VC2011 VC2012 VC2012 VC2012 2164974 2166434 + sodium-dependent transporter similar to GB:AE000782%3B identified by sequence similarity gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=VC2012 VC2013 VC2013 VC2013 2166647 2168149 - PTS system glucose-specific transporter subunits IIBC phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=VC2013 VC2014 VC2014 VC2014 2168521 2169288 - hypothetical protein gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=VC2014 VC2015 VC2015 VC2015 2169279 2170253 - DNA polymerase III subunit delta' catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=VC2015 VC2016 VC2016 tmk tmk 2170246 2170884 - thymidylate kinase catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=VC2016 VC2017 VC2017 VC2017 2170881 2171897 - hypothetical protein gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=VC2017 VC2018 VC2018 VC2018 2171894 2172697 - 4-amino-4-deoxychorismate lyase catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=VC2018 VC2019 VC2019 VC2019 2172775 2174019 - 3-oxoacyl-ACP synthase 'FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP' gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=VC2019 VC2020 VC2020 acpP acpP 2174108 2174344 - acyl carrier protein carries the fatty acid chain in fatty acid biosynthesis gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=VC2020 VC2021 VC2021 fabG fabG 2174580 2175326 - 3-ketoacyl-ACP reductase catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=VC2021 VC2022 VC2022 VC2022 2175342 2176280 - ACP S-malonyltransferase similar to GB:M87040 SP:P25715 GB:Z11565 PID:145887 PID:41364%3B identified by sequence similarity gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=VC2022 VC2023 VC2023 VC2023 2176335 2177285 - 3-oxoacyl-ACP synthase FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=VC2023 VC2024 VC2024 VC2024 2177291 2178316 - glycerol-3-phosphate acyltransferase PlsX involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsY gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=VC2024 VC2025 VC2025 rpmF rpmF 2178326 2178496 - 50S ribosomal protein L32 some L32 proteins have zinc finger motifs consisting of CXXC while others do not gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=VC2025 VC2026 VC2026 VC2026 2178531 2179055 - hypothetical protein gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=VC2026 VC2027 VC2027 maf maf 2179203 2179784 + Maf-like protein Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=VC2027 VC2028 VC2028 VC2028 2179885 2180832 - ribosomal large subunit pseudouridine synthase C similar to SP:P23851 GB:M62747 PID:146050 PID:551786 GB:U00096%3B identified by sequence similarity gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=VC2028 VC2030 VC2030 VC2030 2181444 2184602 + ribonuclease E similar to SP:P21513 GB:X67470 GB:L23942 GB:M62747 GB:X54309%3B identified by sequence similarity gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=VC2030 VC2031 VC2031 VC2031 2184950 2186515 + sulfate permease family protein similar to SP:P55189 PID:1256150 GB:AL009126%3B identified by sequence similarity gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=VC2031 VC2032 VC2032 VC2032 2186633 2187508 + hypothetical protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=VC2032 VC2033 VC2033 VC2033 2187618 2190302 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase similar to GB:M33504 SP:P17547 GB:X59263 GB:X67326 PID:145206%3B identified by sequence similarity gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=VC2033 VC2035 VC2035 VC2035 2190929 2191567 + hypothetical protein gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=VC2035 VC2036 VC2036 VC2036 2191657 2192769 - aspartate-semialdehyde dehydrogenase catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=VC2036 VC2037 VC2037 VC2037 2193194 2194639 + Na+/H+ antiporter similar to SP:P54571 PID:1303989 GB:AL009126%3B identified by sequence similarity gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=VC2037 VC2038 VC2038 VC2038 2194664 2195878 - hypothetical protein gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=VC2038 VC2039 VC2039 VC2039 2196041 2197042 - nucleoid-associated protein NdpA gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=VC2039 VC2040 VC2040 VC2040 2197127 2197342 + hypothetical protein gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=VC2040 VC2041 VC2041 VC2041 2197377 2199179 + hypothetical protein gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=VC2041 VC2042 VC2042 VC2042 2199637 2200557 - histone deacetylase/AcuC/AphA family protein similar to SP:P28606 PID:580726 PID:669044 PID:669045%3B identified by sequence similarity gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=VC2042 VC2043 VC2043 VC2043 2200578 2202521 - DNA topoisomerase III decatenates replicating daughter chromosomes gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=VC2043 VC2044 VC2044 VC2044 2202606 2202938 - hypothetical protein gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=VC2044 VC2045 VC2045 VC2045 2203190 2203774 + superoxide dismutase similar to SP:P09213 GB:X81065 PID:531712%3B identified by sequence similarity gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=VC2045 VC2046 VC2046 VC2046 2203856 2204392 + hypothetical protein gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=VC2046 VC2047 VC2047 VC2047 2204761 2205441 + short chain dehydrogenase similar to SP:P37079 GB:X66059 GB:Y00525 PID:43939%3B identified by sequence similarity gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=VC2047 VC2048 VC2048 VC2048 2205454 2206218 - VacJ lipoprotein similar to GB:U00096 SP:P76506 PID:1788688 PID:1799744%3B identified by sequence similarity gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=VC2048 VC2049 VC2049 VC2049 2206271 2207485 - cytochrome C biogenesis protein CcmI gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=VC2049 VC2050 VC2050 VC2050 2207488 2207964 - cytochrome C biogenesis protein CcmH gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=VC2050 VC2051 VC2051 VC2051 2207961 2208515 - thiol:disulfide interchange protein DsbE similar to SP:P33926 PID:405920 GB:U00096 PID:1788523%3B identified by sequence similarity gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=VC2051 VC2052 VC2052 VC2052 2208516 2210471 - cytochrome c-type biogenesis protein CcmF similar to GB:L42023 SP:P45037 PID:1006386 PID:1221212 PID:1205344%3B identified by sequence similarity gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=VC2052 VC2053 VC2053 VC2053 2210468 2210950 - cytochrome c-type biogenesis protein CcmE CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=VC2053 VC2054 VC2054 VC2054 2210947 2211153 - heme exporter protein D similar to SP:P36770 PID:453988 GB:U00096 PID:1788526%3B identified by sequence similarity gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=VC2054 VC2055 VC2055 VC2055 2211153 2211905 - heme exporter protein C similar to GB:L42023 SP:P45034 PID:1006380 PID:1221209 PID:1205341%3B identified by sequence similarity gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=VC2055 VC2056 VC2056 VC2056 2211996 2212664 - heme exporter protein B similar to GB:L42023 SP:P45033 PID:1006378 PID:1221208 PID:1205340%3B identified by sequence similarity gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=VC2056 VC2057 VC2057 VC2057 2212661 2213284 - cytochrome c biogenesis protein CcmA ATP-binding protein%3B required for proper cytochrome c maturation gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=VC2057 VC2058 VC2058 VC2058 2213658 2214161 - hypothetical protein gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=VC2058 VC2059 VC2059 VC2059 2214137 2214661 - purine-binding chemotaxis protein CheW similar to GB:M13462 SP:P07365 PID:145520 GB:U00096 PID:1736540%3B identified by sequence similarity gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=VC2059 VC2060 VC2060 VC2060 2214670 2215686 - hypothetical protein gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=VC2060 VC2061 VC2061 VC2061 2215679 2216455 - ParA family protein similar to GP:3721574%3B identified by sequence similarity gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=VC2061 VC2062 VC2062 VC2062 2216465 2217598 - chemotaxis-specific methylesterase regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=VC2062 VC2063 VC2063 VC2063 2217625 2219982 - chemotaxis protein CheA similar to GB:M34669 SP:P07363 PID:145529 PID:145530 GB:U00096%3B identified by sequence similarity gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=VC2063 VC2064 VC2064 VC2064 2219992 2220711 - chemotaxis protein CheZ similar to GB:M13463 SP:P07366 PID:145526 GB:U00096 PID:1736534%3B identified by sequence similarity gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=VC2064 VC2065 VC2065 VC2065 2220767 2221159 - chemotaxis protein CheY similar to GB:X61231 PID:45323 SP:Q51455%3B identified by sequence similarity gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=VC2065 VC2066 VC2066 fliA fliA 2221181 2221915 - flagellar biosynthesis sigma factor sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=VC2066 VC2067 VC2067 VC2067 2221908 2222849 - MinD-like protein similar to GP:3695013%3B identified by sequence similarity gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=VC2067 VC2068 VC2068 flhF flhF 2222809 2224296 - flagellar biosynthesis regulator FlhF positive regulator of class III flagellar genes gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=VC2068 VC2069 VC2069 flhA flhA 2224331 2226424 - flagellar biosynthesis protein FlhA membrane protein involved in the flagellar export apparatus gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=VC2069 VC2070 VC2070 VC2070 2226756 2227229 - phosphohistidine phosphatase similar to GB:U00096 PID:1788681%3B identified by sequence similarity gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=VC2070 VC2072 VC2072 VC2072 2227373 2230192 + peptidase insulinase family protein similar to SP:P35559 PID:56492%3B identified by sequence similarity gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=VC2072 VC2073 VC2073 VC2073 2230189 2230785 - hypothetical protein gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=VC2073 VC2074 VC2074 argS argS 2230919 2232718 + arginyl-tRNA synthetase 'catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase' gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=VC2074 VC2075 VC2075 VC2075 2232809 2233252 + histidine triad family protein similar to GB:Pyro_h%3B identified by sequence similarity gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=VC2075 VC2076 VC2076 VC2076 2233514 2233744 - hypothetical protein gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=VC2076 VC2077 VC2077 VC2077 2233741 2236017 - ferrous iron transport protein B similar to SP:P33650 PID:606344 PID:1199515 GB:U00096 PID:1789813%3B identified by sequence similarity gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=VC2077 VC2078 VC2078 VC2078 2236014 2236244 - ferrous iron transport protein A similar to SP:P33649 PID:414746 PID:606343 GB:U00096 PID:1789812%3B identified by sequence similarity gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=VC2078 VC2080 VC2080 VC2080 2237016 2240381 - AraC family transcriptional regulator similar to PID:758214%3B identified by sequence similarity gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=VC2080 VC2081 VC2081 VC2081 2240563 2241456 - zinc ABC transporter substrate-binding protein similar to GB:U00096 SP:P39172 PID:1736500 PID:1788164%3B identified by sequence similarity gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=VC2081 VC2082 VC2082 VC2082 2241531 2242319 + zinc ABC transporter ATP-binding protein similar to SP:P52648 GB:U00096 PID:1736501 PID:1736505 PID:1788165%3B identified by sequence similarity gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=VC2082 VC2083 VC2083 VC2083 2242312 2243094 + zinc ABC transporter permease similar to PID:1054959 GB:U00096 PID:1788166%3B identified by sequence similarity gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=VC2083 VC2084 VC2084 VC2084 2243201 2244073 - succinyl-CoA synthetase subunit alpha Catalyzes the only substrate-level phosphorylation in the TCA cycle gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=VC2084 VC2085 VC2085 sucC sucC 2244073 2245239 - succinyl-CoA synthetase subunit beta catalyzes the interconversion of succinyl-CoA and succinate gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=VC2085 VC2086 VC2086 VC2086 2245407 2246621 - dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=VC2086 VC2087 VC2087 sucA sucA 2246650 2249460 - 2-oxoglutarate dehydrogenase E1 SucA%3B E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate%3B SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=VC2087 VC2088 VC2088 sdhB sdhB 2249549 2250259 - succinate dehydrogenase iron-sulfur subunit part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=VC2088 VC2089 VC2089 sdhA sdhA 2250274 2252040 - succinate dehydrogenase flavoprotein subunit part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=VC2089 VC2090 VC2090 VC2090 2252041 2252385 - succinate dehydrogenase hydrophobic membrane anchor protein similar to GB:J01619 SP:P10445 GB:X00980 PID:146198 PID:42924%3B identified by sequence similarity gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=VC2090 VC2091 VC2091 sdhC sdhC 2252379 2252771 - succinate dehydrogenase cytochrome b556 large membrane subunit similar to GB:J01619 SP:P10446 GB:X00980 PID:146197 PID:42923%3B identified by sequence similarity gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=VC2091 VC2092 VC2092 gltA gltA 2253161 2254456 + type II citrate synthase 'type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH' gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=VC2092 VC2093 VC2093 VC2093 2254508 2255278 - hypothetical protein gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=VC2093 VC2094 VC2094 VC2094 2255331 2256104 + hypothetical protein gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=VC2094 VC2095 VC2095 VC2095 2256154 2257800 - phosphoglucomutase catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=VC2095 VC2096 VC2096 VC2096 2257909 2258442 - replication initiation regulator SeqA negative modulator of the initiation of chromosome replication gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=VC2096 VC2097 VC2097 VC2097 2258535 2259308 + esterase similar to GB:U00096 PID:1786902%3B identified by sequence similarity gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=VC2097 VC2098 VC2098 VC2098 2259404 2259625 + hypothetical protein gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=VC2098 VC2099 VC2099 VC2099 2259674 2260201 + flavodoxin FldA 'An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group' gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=VC2099 VC2100 VC2100 VC2100 2260275 2260964 - hypothetical protein gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=VC2100 VC2101 VC2101 VC2101 2260970 2261410 - hypothetical protein gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=VC2101 VC2103 VC2103 VC2103 2261526 2262404 + LysR family transcriptional regulator similar to GB:X73124 SP:P39592 PID:413948 GB:AL009126%3B identified by sequence similarity gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=VC2103 VC2105 VC2105 VC2105 2262408 2262909 - gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=VC2105 VC2106 VC2106 fur fur 2263275 2263727 + ferric uptake regulator negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=VC2106 VC2107 VC2107 VC2107 2263809 2264825 - aspartate-semialdehyde dehydrogenase catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=VC2107 VC2108 VC2108 VC2108 2264806 2265969 - erythronate-4-phosphate dehydrogenase catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=VC2108 VC2109 VC2109 VC2109 2266155 2267365 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=VC2109 VC2110 VC2110 mnmC mnmC 2267483 2269507 + 5-methylaminomethyl-2-thiouridine methyltransferase catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=VC2110 VC2111 VC2111 VC2111 2269586 2270113 - hypothetical protein gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=VC2111 VC2112 VC2112 VC2112 2270321 2270584 - hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=VC2112 VC2113 VC2113 VC2113 2270623 2271153 - hypothetical protein gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=VC2113 VC2115 VC2115 VC2115 2271517 2272140 + hypothetical protein gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=VC2115 VC2116 VC2116 VC2116 2272222 2273307 - chorismate synthase catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=VC2116 VC2118 VC2118 VC2118 2273537 2274481 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase involved in methylation of ribosomal protein L3 gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=VC2118 VC2119 VC2119 VC2119 2274536 2275096 + hypothetical protein gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=VC2119 VC2120 VC2120 flhB flhB 2275104 2276234 - flagellar biosynthesis protein FlhB membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=VC2120 VC2121 VC2121 fliR fliR 2276244 2277026 - flagellar biosynthesis protein FliR 'FliR%2C with proteins FliP and FliQ%2C forms the core of the central channel in the flagella export apparatus' gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=VC2121 VC2122 VC2122 fliQ fliQ 2277035 2277304 - flagellar biosynthesis protein FliQ with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=VC2122 VC2123 VC2123 fliP fliP 2277317 2278216 - flagellar biosynthesis protein FliP 'FliP%2C with proteins FliQ and FliR%2C forms the core of the central channel in the flagella export apparatus' gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=VC2123 VC2124 VC2124 VC2124 2278194 2278583 - flagellar protein FliO similar to GB:L22182 SP:P22586 PID:347242 GB:U00096 PID:1736613%3B identified by sequence similarity gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=VC2124 VC2125 VC2125 fliN fliN 2278587 2279003 - flagellar motor switch protein One of three proteins involved in switching the direction of the flagellar rotation gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=VC2125 VC2126 VC2126 fliM fliM 2279068 2280117 - flagellar motor switch protein FliM with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=VC2126 VC2127 VC2127 fliL fliL 2280125 2280628 - flagellar basal body protein FliL interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=VC2127 VC2128 VC2128 VC2128 2280663 2282687 - flagellar hook-length control protein FliK similar to PID:894083 SP:P52614 GB:U00096 PID:1736609 PID:1788253%3B identified by sequence similarity gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=VC2128 VC2129 VC2129 fliJ fliJ 2282851 2283345 - flagellar biosynthesis chaperone rod/hook and filament chaperone gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=VC2129 VC2130 VC2130 fliI fliI 2283309 2284628 - flagellum-specific ATP synthase involved in type III protein export during flagellum assembly gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=VC2130 VC2131 VC2131 fliH fliH 2284632 2285444 - flagellar assembly protein H binds to and inhibits the function of flagella specific ATPase FliI gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=VC2131 VC2132 VC2132 fliG fliG 2285525 2286571 - flagellar motor switch protein G One of three proteins involved in switching the direction of the flagellar rotation gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=VC2132 VC2133 VC2133 fliF fliF 2286564 2288306 - flagellar MS-ring protein 'the MS-ring anchors the flagellum to the cytoplasmic membrane%3B part of the flagellar basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod' gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=VC2133 VC2134 VC2134 fliE fliE 2288322 2288633 - flagellar hook-basal body protein FliE forms a junction between the M-ring and FlgB during flagella biosynthesis gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=VC2134 VC2135 VC2135 VC2135 2288709 2290148 - Fis family transcriptional regulator similar to PID:2352978%3B identified by sequence similarity gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=VC2135 VC2136 VC2136 VC2136 2290145 2291200 - sensory box sensor histidine kinase similar to PID:2338728%3B identified by sequence similarity gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=VC2136 VC2137 VC2137 VC2137 2291312 2292778 - Fis family transcriptional regulator similar to PID:2338727%3B identified by sequence similarity gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=VC2137 VC2138 VC2138 fliS fliS 2293010 2293420 - flagellar protein FliS flagellin specific chaperone gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=VC2138 VC2139 VC2139 VC2139 2293431 2293745 - flagellar rod protein FlaI similar to GB:U12816 PID:1254204%3B identified by sequence similarity gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=VC2139 VC2140 VC2140 fliD fliD 2293738 2295738 - flagellar capping protein involved in flagellin assembly gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=VC2140 VC2141 VC2141 VC2141 2295760 2296221 - flagellar protein FlaG possibly involved in flagella export gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=VC2141 VC2142 VC2142 VC2142 2296295 2297425 - flagellin 'structural flagella protein%3B Vibrio contains multiple flagellin genes usually localized into two region on the chromosome%2C flaAC and flaCEDB in V. cholerae%2C flaFBA and flaCDE in V. parahemolyticus%3B FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus' gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=VC2142 VC2143 VC2143 VC2143 2297661 2298794 - flagellin 'structural flagella protein%3B Vibrio contains multiple flagellin genes usually localized into two region on the chromosome%2C flaAC and flaCEDB in V. cholerae%2C flaFBA and flaCDE in V. parahemolyticus%3B FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus' gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=VC2143 VC2144 VC2144 VC2144 2299084 2300220 - flagellin 'structural flagella protein%3B Vibrio contains multiple flagellin genes usually localized into two region on the chromosome%2C flaAC and flaCEDB in V. cholerae%2C flaFBA and flaCDE in V. parahemolyticus%3B FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus' gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=VC2144 VC2145 VC2145 VC2145 2300344 2301252 - TyrA protein similar to GP:6648543%3B identified by sequence similarity gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=VC2145 VC2146 VC2146 VC2146 2301318 2301782 - hypothetical protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=VC2146 VC2147 VC2147 VC2147 2301926 2302282 + hypothetical protein gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=VC2147 VC2149 VC2149 VC2149 2302349 2302636 - hypothetical protein gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=VC2149 VC2150 VC2150 VC2150 2302839 2303234 + hypothetical protein gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=VC2150 VC2152 VC2152 VC2152 2303265 2304398 + succinyl-diaminopimelate desuccinylase 'dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase (DapE)%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.' gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=VC2152 VC2153 VC2153 VC2153 2304326 2305075 + D%2CD-carboxypeptidase-like protein similar to GB:L42023 SP:P43941 PID:1003104 PID:1222012 PID:1204359%3B identified by sequence similarity gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=VC2153 VC2154 VC2154 VC2154 2305065 2305289 + hypothetical protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=VC2154 VC2156 VC2156 VC2156 2305382 2306401 - lipoprotein similar to SP:P21167 PID:147409 PID:42126 GB:U00096 PID:1788822%3B identified by sequence similarity gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=VC2156 VC2157 VC2157 dapA dapA 2306459 2307337 - dihydrodipicolinate synthase catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=VC2157 VC2159 VC2159 VC2159 2307615 2308157 + glycine cleavage system transcriptional repressor similar to GB:M63654 SP:P23483 PID:147016 GB:U00096 PID:1607611%3B identified by sequence similarity gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=VC2159 VC2160 VC2160 bcp bcp 2308172 2308639 + thioredoxin-dependent thiol peroxidase bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=VC2160 VC2161 VC2161 VC2161 2308741 2310612 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=VC2161 VC2162 VC2162 VC2162 2310803 2311867 - permease PerM similar to GB:U00096 SP:P77406 PID:1621505 PID:1788838%3B identified by sequence similarity gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=VC2162 VC2163 VC2163 VC2163 2311860 2312096 - hypothetical protein gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=VC2163 VC2164 VC2164 VC2164 2312280 2313734 + hypothetical protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=VC2164 VC2165 VC2165 VC2165 2313757 2314107 + arsenate reductase similar to GB:U00096 PID:1788841%3B identified by sequence similarity gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=VC2165 VC2166 VC2166 VC2166 2314104 2314664 + Trp repressor-binding protein similar to GB:M99166 SP:P30849 PID:148264 GB:U00096 PID:1651499%3B identified by sequence similarity gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=VC2166 VC2167 VC2167 VC2167 2314667 2315104 + hypothetical protein gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=VC2167 VC2168 VC2168 VC2168 2315311 2316459 - hypothetical protein gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=VC2168 VC2171 VC2171 VC2171 2316680 2317933 + uracil permease similar to GB:L42023 SP:P45117 PID:1007126 PID:1221353 PID:1205467%3B identified by sequence similarity gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=VC2171 VC2172 VC2172 VC2172 2318004 2318486 - hypothetical protein gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=VC2172 VC2174 VC2174 ushA ushA 2318621 2320282 - bifunctional UDP-sugar hydrolase/5'-nucleotidase 'catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides' gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=VC2174 VC2175 VC2175 VC2175 2320824 2321675 - 2-dehydro-3-deoxyphosphooctonate aldolase catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=VC2175 VC2176 VC2176 VC2176 2321695 2322507 - hypothetical protein gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=VC2176 VC2177 VC2177 VC2177 2322523 2322906 - hypothetical protein gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=VC2177 VC2178 VC2178 VC2178 2322906 2323766 - protein-(glutamine-N5) methyltransferase HemK similar to GB:D28567 SP:P37186 PID:466533 PID:968931 GB:U00096%3B identified by sequence similarity gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=VC2178 VC2179 VC2179 prfA prfA 2323770 2324858 - peptide chain release factor 1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2 gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=VC2179 VC2180 VC2180 hemA hemA 2324888 2326147 - glutamyl-tRNA reductase catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=VC2180 VC2181 VC2181 lolB lolB 2326288 2326923 + molecular chaperone LolB Incorporates lipoproteins in the outer membrane after they are released by the LolA protein gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=VC2181 VC2182 VC2182 ipk ipk 2326905 2327792 + 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=VC2182 VC2183 VC2183 VC2183 2327823 2328767 + ribose-phosphate pyrophosphokinase catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=VC2183 VC2184 VC2184 VC2184 2328936 2329526 + peptidyl-tRNA hydrolase Enables the recycling of peptidyl-tRNAs produced at termination of translation gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=VC2184 VC2185 VC2185 ychF ychF 2329537 2330628 + GTP-dependent nucleic acid-binding protein EngD translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1 gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=VC2185 VC2187 VC2187 VC2187 2332968 2334101 - flagellin 'structural flagella protein%3B Vibrio contains multiple flagellin genes usually localized into two region on the chromosome%2C flaAC and flaCEDB in V. cholerae%2C flaFBA and flaCDE in V. parahemolyticus%3B FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus' gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=VC2187 VC2188 VC2188 VC2188 2334656 2335795 - flagellin 'structural flagella protein%3B Vibrio contains multiple flagellin genes usually localized into two region on the chromosome%2C flaAC and flaCEDB in V. cholerae%2C flaFBA and flaCDE in V. parahemolyticus%3B FlaA is sigma 54 dependent and essential for motility in V.cholerae but not in V. parahaemolyticus' gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=VC2188 VC2190 VC2190 flgL flgL 2336203 2337396 - flagellar hook-associated protein FlgL 'with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.' gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=VC2190 VC2191 VC2191 flgK flgK 2337409 2339283 - flagellar hook-associated protein FlgK with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=VC2191 VC2192 VC2192 flgJ flgJ 2339463 2340401 - flagellar rod assembly protein/muramidase FlgJ Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=VC2192 VC2193 VC2193 flgI flgI 2340412 2341497 - flagellar basal body P-ring biosynthesis protein FlgA 'part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum' gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=VC2193 VC2194 VC2194 flgH flgH 2341588 2342373 - flagellar basal body L-ring protein 'part of the flagellar basal body which consists of four rings L%2CP%2C S and M mounted on a central rod' gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=VC2194 VC2195 VC2195 flgG flgG 2342388 2343176 - flagellar basal body rod protein FlgG makes up the distal portion of the flagellar basal body rod gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=VC2195 VC2196 VC2196 flgF flgF 2343196 2343945 - flagellar basal body rod protein FlgF 'FlgF%2C with FlgB and C%2C makes up the proximal portion of the flagellar basal body rod' gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=VC2196 VC2197 VC2197 flgE flgE 2344128 2345432 - flagellar hook protein FlgE the hook connects flagellar basal body to the flagellar filament gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=VC2197 VC2198 VC2198 flgD flgD 2345461 2346168 - flagellar basal body rod modification protein 'acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production' gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=VC2198 VC2199 VC2199 flgC flgC 2346186 2346602 - flagellar basal body rod protein FlgC with FlgF and B makes up the proximal portion of the flagellar basal body rod gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=VC2199 VC2200 VC2200 flgB flgB 2346607 2347002 - flagellar basal-body rod protein FlgB with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Vibrio parahaemolyticus protein is associated with the polar flagella gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=VC2200 VC2201 VC2201 VC2201 2347222 2348049 - chemotaxis protein CheR similar to PID:1177141%3B identified by sequence similarity gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=VC2201 VC2202 VC2202 VC2202 2348060 2348986 - chemotaxis protein CheV similar to SP:P37599 GB:U05345 GB:Z29584 PID:453378 PID:580837%3B identified by sequence similarity gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=VC2202 VC2203 VC2203 flgA flgA 2349043 2349810 + flagellar basal body P-ring biosynthesis protein FlgA required for the assembly of the flagellar basal body P-ring gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=VC2203 VC2204 VC2204 VC2204 2349941 2350264 + flagellin synthesis negative regulator FlgM similar to GB:L14437 SP:P39809 PID:451869 PID:1762336 GB:AL009126%3B identified by sequence similarity gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=VC2204 VC2205 VC2205 VC2205 2350362 2350793 + hypothetical protein gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=VC2205 VC2206 VC2206 VC2206 2350903 2351340 - hypothetical protein gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=VC2206 VC2207 VC2207 VC2207 2351348 2352016 - hypothetical protein gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=VC2207 VC2208 VC2208 VC2208 2352144 2353277 + hypothetical protein gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=VC2208 VC2209 VC2209 vibF vibF 2353407 2360647 - nonribosomal peptide synthetase VibF gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=VC2209 VC2210 VC2210 VC2210 2360905 2361720 - vibriobactin utilization protein ViuB similar to GB:U11759 PID:531823 SP:Q56646%3B identified by sequence similarity gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=VC2210 VC2211 VC2211 VC2211 2362024 2364087 - ferric vibriobactin receptor similar to SP:Q00964 PID:531822%3B identified by sequence similarity gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=VC2211 VC2212 VC2212 VC2212 2364507 2365205 + hypothetical protein gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=VC2212 VC2213 VC2213 VC2213 2365293 2366258 - outer membrane protein OmpA similar to GP:2641145%3B identified by sequence similarity gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=VC2213 VC2214 VC2214 gltX gltX 2366554 2368083 - glutamyl-tRNA synthetase Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=VC2214 VC2215 VC2215 VC2215 2368152 2370899 + cation transporter E1-E2 family ATPase similar to GB:U00096 SP:Q59385 PID:1773166 PID:1786691%3B identified by sequence similarity gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=VC2215 VC2216 VC2216 VC2216 2370896 2371348 + hypothetical protein gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=VC2216 VC2217 VC2217 VC2217 2371485 2374136 - beta-N-acetylhexosaminidase similar to PID:1698442%3B identified by sequence similarity gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=VC2217 VC2220 VC2220 VC2220 2374553 2375449 + hypothetical protein gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=VC2220 VC2221 VC2221 VC2221 2375930 2376070 + hypothetical protein gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=VC2221 VC2222 VC2222 VC2222 2376252 2376830 + hypothetical protein gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=VC2222 VC2223 VC2223 VC2223 2376860 2377882 + pseudouridine synthase similar to SP:P32684 PID:396357 GB:U00096 PID:1790453%3B identified by sequence similarity gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=VC2223 VC2224 VC2224 VC2224 2377980 2379518 - GGDEF family protein similar to GB:U00096 PID:1787603%3B identified by sequence similarity gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=VC2224 VC2225 VC2225 upp upp 2379749 2380375 - uracil phosphoribosyltransferase Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=VC2225 VC2226 VC2226 VC2226 2380542 2381582 + phosphoribosylaminoimidazole synthetase catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=VC2226 VC2227 VC2227 purN purN 2381585 2382223 + phosphoribosylglycinamide formyltransferase glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=VC2227 VC2229 VC2229 VC2229 2382364 2383209 - hypothetical protein gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=VC2229 VC2230 VC2230 gmhA gmhA 2383272 2383847 - phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=VC2230 VC2231 VC2231 fadE fadE 2384165 2386609 + acyl-CoA dehydrogenase functions in fatty acid oxidation%3B converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=VC2231 VC2232 VC2232 VC2232 2386756 2388015 - hypothetical protein gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=VC2232 VC2233 VC2233 VC2233 2388024 2388767 - DNA polymerase III subunit epsilon 3'-5' exonuclease of DNA polymerase III gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=VC2233 VC2234 VC2234 rnhA rnhA 2388824 2389294 + ribonuclease H An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=VC2234 VC2235 VC2235 VC2235 2389365 2390102 - hypothetical protein gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=VC2235 VC2236 VC2236 VC2236 2390140 2390898 + hydroxyacylglutathione hydrolase GloB similar to PID:1208973 GB:U00096 SP:Q47677 PID:1552782 PID:1786406%3B identified by sequence similarity gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=VC2236 VC2237 VC2237 VC2237 2390970 2392568 + membrane-bound lytic murein transglycosylase D similar to SP:P23931 GB:X60739 PID:1208972 PID:581068 GB:U00096%3B identified by sequence similarity gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=VC2237 VC2238 VC2238 VC2238 2392585 2393430 - hypothetical protein gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=VC2238 VC2239 VC2239 VC2239 2393498 2393842 - nitrogen regulatory protein P-II similar to SP:P11671 PID:43806%3B identified by sequence similarity gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=VC2239 VC2240 VC2240 VC2240 2393996 2394520 - decarboxylase similar to GB:AL009126%3B identified by sequence similarity gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=VC2240 VC2241 VC2241 VC2241 2394897 2395220 - cytochrome c554 similar to SP:P00105%3B identified by sequence similarity gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=VC2241 VC2242 VC2242 VC2242 2395256 2396578 - MesJ protein similar to GB:U00096 PID:1552765 PID:1786386 PID:971394%3B identified by sequence similarity gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=VC2242 VC2244 VC2244 VC2244 2396718 2397677 - acetyl-CoA carboxylase carboxyltransferase subunit alpha catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=VC2244 VC2245 VC2245 dnaE dnaE 2397732 2401226 - DNA polymerase III subunit alpha catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=VC2245 VC2246 VC2246 rnhB rnhB 2401250 2401870 - ribonuclease HII RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=VC2246 VC2247 VC2247 lpxB lpxB 2401895 2403034 - lipid-A-disaccharide synthase 'catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM' gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=VC2247 VC2248 VC2248 VC2248 2403195 2403983 - UDP-N-acetylglucosamine acyltransferase catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=VC2248 VC2249 VC2249 fabZ fabZ 2403985 2404446 - (3R)-hydroxymyristoyl-ACP dehydratase in Pseudomonas aeruginosa this enzyme is a trimer of dimers%3B essential for membrane formation%3B performs third step of type II fatty acid biosynthesis%3B catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=VC2249 VC2250 VC2250 lpxD lpxD 2404522 2405577 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=VC2250 VC2251 VC2251 VC2251 2405587 2406096 - outer membrane protein OmpH similar to PID:1935023%3B identified by sequence similarity gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=VC2251 VC2252 VC2252 VC2252 2406111 2408522 - outer membrane protein assembly factor YaeT 'part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins' gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=VC2252 VC2253 VC2253 VC2253 2408571 2409929 - hypothetical protein gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=VC2253 VC2254 VC2254 VC2254 2409926 2411134 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=VC2254 VC2255 VC2255 VC2255 2411183 2412025 - phosphatidate cytidylyltransferase similar to GB:L42023 SP:P44937 PID:1006039 PID:1221024 PID:1205166%3B identified by sequence similarity gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=VC2255 VC2256 VC2256 VC2256 2412043 2412813 - undecaprenyl diphosphate synthase similar to GB:L42023 SP:P44938 PID:1006041 PID:1221025 PID:1205167%3B identified by sequence similarity gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=VC2256 VC2257 VC2257 frr frr 2412887 2413444 - ribosome recycling factor Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=VC2257 VC2258 VC2258 pyrH pyrH 2413498 2414229 - uridylate kinase Catalyzes the phosphorylation of UMP to UDP gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=VC2258 VC2259 VC2259 tsf tsf 2414417 2415259 - elongation factor Ts EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=VC2259 VC2260 VC2260 rpsB rpsB 2415391 2416119 - 30S ribosomal protein S2 one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=VC2260 VC2261 VC2261 VC2261 2416460 2417302 + methionine aminopeptidase 'catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn' gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=VC2261 VC2262 VC2262 VC2262 2417392 2420037 + PII uridylyl-transferase catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=VC2262 VC2264 VC2264 VC2264 2420283 2420696 + hypothetical protein gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=VC2264 VC2265 VC2265 VC2265 2420737 2421246 - phosphatidylglycerophosphatase A hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=VC2265 VC2266 VC2266 VC2266 2421243 2422247 - thiamine monophosphate kinase catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=VC2266 VC2267 VC2267 nusB nusB 2422308 2422778 - transcription antitermination protein NusB Regulates rRNA biosynthesis by transcriptional antitermination gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=VC2267 VC2268 VC2268 ribH ribH 2422778 2423248 - 6%2C7-dimethyl-8-ribityllumazine synthase 'RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not' gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=VC2268 VC2269 VC2269 VC2269 2423513 2424622 - 3%2C4-dihydroxy-2-butanone 4-phosphate synthase similar to GB:M90094 SP:Q02008 PID:150708%3B identified by sequence similarity gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=VC2269 VC2270 VC2270 VC2270 2424663 2425316 - riboflavin synthase subunit alpha 'catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine' gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=VC2270 VC2271 VC2271 VC2271 2425321 2426424 - riboflavin-specific deaminase similar to GB:L42023 SP:P44326 PID:1006089 PID:1221052 PID:1205192%3B identified by sequence similarity gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=VC2271 VC2272 VC2272 nrdR nrdR 2426450 2426899 - transcriptional regulator NrdR gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=VC2272 VC2273 VC2273 proA proA 2426999 2428252 - gamma-glutamyl phosphate reductase Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=VC2273 VC2274 VC2274 VC2274 2428261 2429394 - gamma-glutamyl kinase catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=VC2274 VC2275 VC2275 VC2275 2429515 2429904 - DNA-binding transcriptional regulator Crl involved in the expression of csgBA which is involved in curli formation%3B interacts with sigmaS gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=VC2275 VC2276 VC2276 frsA frsA 2430038 2431285 - fermentation/respiration switch protein forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=VC2276 VC2277 VC2277 VC2277 2431382 2431846 - xanthine-guanine phosphoribosyltransferase 'catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively' gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=VC2277 VC2278 VC2278 VC2278 2431884 2433176 - hypothetical protein gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=VC2278 VC2279 VC2279 VC2279 2434055 2435527 + aminoacyl-histidine dipeptidase similar to GB:M34034 SP:P15288 GB:X14790 PID:1208983 PID:147140%3B identified by sequence similarity gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=VC2279 VC2280 VC2280 VC2280 2435761 2436204 + hypothetical protein gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=VC2280 VC2281 VC2281 VC2281 2436201 2437106 + ribosomal protein S6 modification protein similar to SP:P17116 GB:X15859 PID:42747 GB:U00096 PID:1651386%3B identified by sequence similarity gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=VC2281 VC2282 VC2282 VC2282 2437066 2438154 + hypothetical protein gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=VC2282 VC2283 VC2283 VC2283 2438223 2439578 - sodium-dependent transporter similar to GB:AL009126%3B identified by sequence similarity gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=VC2283 VC2285 VC2285 VC2285 2439735 2441252 - GGDEF family protein similar to GP:2529422%3B identified by sequence similarity gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=VC2285 VC2286 VC2286 VC2286 2441316 2442086 - hypothetical protein gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=VC2286 VC2287 VC2287 VC2287 2442332 2443414 - DNA polymerase IV involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=VC2287 VC2288 VC2288 VC2288 2443523 2443756 - hypothetical protein gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=VC2288 VC2289 VC2289 VC2289 2443773 2444777 - thiamin biosynthesis lipoprotein ApbE similar to GB:L42023 SP:P44550 PID:1003244 PID:1222087 PID:1204428%3B identified by sequence similarity gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=VC2289 VC2290 VC2290 VC2290 2444923 2446149 - Na(+)-translocating NADH-quinone reductase subunit F uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=VC2290 VC2291 VC2291 VC2291 2446183 2446779 - Na(+)-translocating NADH-quinone reductase subunit E 'Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.' gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=VC2291 VC2292 VC2292 VC2292 2446787 2447419 - Na(+)-translocating NADH-quinone reductase subunit D 'Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm' gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=VC2292 VC2293 VC2293 VC2293 2447419 2448192 - Na(+)-translocating NADH-quinone reductase subunit C uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=VC2293 VC2294 VC2294 VC2294 2448179 2449462 - Na(+)-translocating NADH-quinone reductase subunit B uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=VC2294 VC2295 VC2295 VC2295 2449432 2450820 - Na(+)-translocating NADH-quinone reductase subunit A uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=VC2295 VC2296 VC2296 VC2296 2451257 2451577 - penicillin binding proteins/beta lactamase transcription regulator BolA similar to PID:663269%3B identified by sequence similarity gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=VC2296 VC2297 VC2297 VC2297 2451622 2452872 + hypothetical protein gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=VC2297 VC2298 VC2298 VC2298 2452869 2453489 + lipoprotein similar to GB:L42023 SP:P43782 PID:1003225 PID:1222077 PID:644853%3B identified by sequence similarity gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=VC2298 VC2299 VC2299 VC2299 2453446 2454030 + peptidyl-prolyl cis-trans isomerase A similar to GB:M28363 SP:P20752 PID:145287 PID:145954 PID:147052%3B identified by sequence similarity gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=VC2299 VC2300 VC2300 VC2300 2454099 2455487 + ampG protein similar to GB:U00096 SP:P36670 PID:1773117 PID:1786636 PID:563855%3B identified by sequence similarity gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=VC2300 VC2301 VC2301 VC2301 2455575 2456255 - transcriptional activator similar to SP:P40685%3B identified by sequence similarity gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=VC2301 VC2302 VC2302 VC2302 2456252 2456836 - RNA polymerase sigma factor Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=VC2302 VC2303 VC2303 VC2303 2456927 2457508 - hypothetical protein gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=VC2303 VC2305 VC2305 VC2305 2457836 2458636 + outer membrane protein OmpK similar to PID:1166401 SP:P51002%3B identified by sequence similarity gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=VC2305 VC2307 VC2307 VC2307 2458775 2459665 + 2-dehydropantoate 2-reductase ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=VC2307 VC2308 VC2308 VC2308 2459650 2460267 + 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein similar to PID:1100872 GB:U00096 SP:Q46948 PID:1773108 PID:1786626%3B identified by sequence similarity gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=VC2308 VC2309 VC2309 VC2309 2460251 2461465 + class V aminotransferase similar to PID:882705 GB:U00096 PID:1789175%3B identified by sequence similarity gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=VC2309 VC2310 VC2310 VC2310 2461535 2461969 - hypothetical protein gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=VC2310 VC2311 VC2311 VC2311 2461974 2462795 - HesA/MoeB/ThiF family protein similar to GB:D21145 PID:471103 PID:882707 GB:U00096 SP:Q46927%3B identified by sequence similarity gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=VC2311 VC2312 VC2312 mltA mltA 2462887 2463993 - murein transglycosylase A 'membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues' gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=VC2312 VC2314 VC2314 VC2314 2464064 2464468 - hypothetical protein gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=VC2314 VC2316 VC2316 VC2316 2464704 2466074 + N-acetylglutamate synthase catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=VC2316 VC2318 VC2318 VC2318 2466301 2466486 + hypothetical protein gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=VC2318 VC2319 VC2319 VC2319 2466516 2468636 - exodeoxyribonuclease V similar to GP:3142727%3B identified by sequence similarity gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=VC2319 VC2320 VC2320 VC2320 2468633 2472259 - exodeoxyribonuclease V similar to SP:P08394 GB:X04581 GB:X04582 PID:42682 PID:763090%3B identified by sequence similarity gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=VC2320 VC2322 VC2322 recC recC 2472524 2475970 - exonuclease V subunit gamma catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=VC2322 VC2323 VC2323 VC2323 2476209 2477177 - hypothetical protein gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=VC2323 VC2324 VC2324 VC2324 2477288 2478202 + LysR family transcriptional regulator similar to SP:P32484 PID:405876 PID:466777 GB:U00096 PID:1788481%3B identified by sequence similarity gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=VC2324 VC2326 VC2326 VC2326 2478318 2478626 + hypothetical protein gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=VC2326 VC2329 VC2329 VC2329 2479033 2480064 + 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase similar to GP:3183692%3B identified by sequence similarity gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=VC2329 VC2330 VC2330 VC2330 2480146 2481390 - hypothetical protein gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=VC2330 VC2332 VC2332 VC2332 2481493 2482584 - acetyltransferase similar to GB:Pyro_h%3B identified by sequence similarity gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=VC2332 VC2333 VC2333 VC2333 2482789 2484240 + ribosomal protein S6 modification protein-like protein similar to GB:AE000782%3B identified by sequence similarity gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=VC2333 VC2334 VC2334 VC2334 2484430 2485413 + hypothetical protein gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=VC2334 VC2335 VC2335 VC2335 2485397 2485984 + hypothetical protein gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=VC2335 VC2336 VC2336 VC2336 2485981 2486325 - hypothetical protein similar to SP:P42589 PID:606012 GB:U00096 PID:1789455%3B identified by sequence similarity gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=VC2336 VC2337 VC2337 VC2337 2486484 2487491 + LacI family transcription regulator similar to GB:J01614 SP:P03024 GB:V00280 PID:146068 PID:41534%3B identified by sequence similarity gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=VC2337 VC2338 VC2338 VC2338 2487503 2490636 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=VC2338 VC2339 VC2339 VC2339 2490959 2492101 + chromate resistance protein-like protein similar to GB:S41232 GB:S41228%3B identified by sequence similarity gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=VC2339 VC2340 VC2340 VC2340 2492237 2493391 + hypothetical protein gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=VC2340 VC2341 VC2341 VC2341 2493591 2495282 + long-chain-fatty-acid--CoA ligase similar to GB:AE000782%3B identified by sequence similarity gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=VC2341 VC2342 VC2342 fusA fusA 2495396 2497483 - elongation factor G EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=VC2342 VC2343 VC2343 VC2343 2497754 2499133 - DNA repair protein RadA Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents gene gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=VC2343 VC2344 VC2344 VC2344 2499261 2501600 + hypothetical protein gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=VC2344 VC2345 VC2345 serB serB 2501805 2502791 - phosphoserine phosphatase catalyzes the formation of serine from O-phosphoserine gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=VC2345 VC2346 VC2346 VC2346 2502888 2503511 + smp protein similar to SP:P18838 GB:M30784 GB:X03046 PID:432633 PID:436177%3B identified by sequence similarity gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=VC2346 VC2347 VC2347 deoD deoD 2503591 2504316 - purine nucleoside phosphorylase catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=VC2347 VC2348 VC2348 VC2348 2504399 2505619 - phosphopentomutase catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=VC2348 VC2349 VC2349 deoA deoA 2505637 2506983 - thymidine phosphorylase 'Catalyzes the reversible phosphorolysis of thymidine%2C deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate' gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=VC2349 VC2350 VC2350 VC2350 2507071 2507850 - deoxyribose-phosphate aldolase catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=VC2350 VC2352 VC2352 VC2352 2508452 2509708 - NupC family protein similar to GB:L42023 SP:P44742 PID:1003922 PID:1222453 PID:1204770%3B identified by sequence similarity gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=VC2352 VC2353 VC2353 VC2353 2509895 2510746 - hypothetical protein gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=VC2353 VC2355 VC2355 VC2355 2510861 2511634 - hypothetical protein gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=VC2355 VC2356 VC2356 VC2356 2511798 2513228 - sodium/alanine symporter similar to SP:P30143 GB:U00096 PID:1786188%3B identified by sequence similarity gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=VC2356 VC2357 VC2357 VC2357 2513867 2514100 + hypothetical protein gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=VC2357 VC2358 VC2358 VC2358 2514244 2514795 - hypothetical protein gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=VC2358 VC2359 VC2359 VC2359 2514885 2515565 - uracil-DNA glycosylase Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=VC2359 VC2360 VC2360 VC2360 2515934 2516794 - endonuclease IV Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=VC2360 VC2361 VC2361 VC2361 2517140 2517517 + autonomous glycyl radical cofactor GrcA stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=VC2361 VC2362 VC2362 VC2362 2517597 2518877 - threonine synthase catalyzes the formation of L-threonine from O-phospho-L-homoserine gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=VC2362 VC2363 VC2363 VC2363 2518874 2519830 - homoserine kinase catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=VC2363 VC2364 VC2364 thrA thrA 2519851 2522310 - bifunctional aspartokinase I/homoserine dehydrogenase I multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=VC2364 VC2365 VC2365 VC2365 2522858 2523340 + hypothetical protein gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=VC2365 VC2366 VC2366 VC2366 2523337 2523825 - ribonuclease activity regulator protein RraA regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=VC2366 VC2367 VC2367 VC2367 2523852 2524235 - hypothetical protein gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=VC2367 VC2368 VC2368 VC2368 2524550 2525266 + two-component response regulator similar to SP:P03026 GB:M10044 PID:145818 PID:537241 GB:U00096%3B identified by sequence similarity gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=VC2368 VC2369 VC2369 VC2369 2525325 2527682 - aerobic respiration control sensor protein ArcB sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=VC2369 VC2370 VC2370 VC2370 2527789 2529528 - sensory box/GGDEF family protein similar to PID:1652133%3B identified by sequence similarity gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=VC2370 VC2371 VC2371 VC2371 2529596 2530546 - hypothetical protein gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=VC2371 VC2373 VC2373 VC2373 2531065 2535657 + glutamate synthase large subunit similar to GB:X80485 PID:515938 SP:P55037 PID:1652093%3B identified by sequence similarity gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=VC2373 VC2374 VC2374 gltD gltD 2535658 2537127 + glutamate synthase subunit beta 'glutamate synthase is composed of subunits alpha and beta%3B beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase%3B provides electrons to the alpha subunit%2C which binds L-glutamine and 2-oxoglutarate and forms L-glutamate' gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=VC2374 VC2376 VC2376 gltB gltB 2537655 2542118 + glutamate synthase subunit alpha catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=VC2376 VC2377 VC2377 gltD gltD 2542134 2543549 + glutamate synthase subunit beta 'glutamate synthase is composed of subunits alpha and beta%3B beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase%3B provides electrons to the alpha subunit%2C which binds L-glutamine and 2-oxoglutarate and forms L-glutamate' gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=VC2377 VC2378 VC2378 VC2378 2543736 2544170 + hypothetical protein gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=VC2378 VC2379 VC2379 VC2379 2544258 2544953 + 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=VC2379 VC2380 VC2380 VC2380 2544966 2545919 + adenosylcobinamide-phosphate synthase catalyzes the formation of adenosylcobinamide-phosphate from adenosylcobyric acid gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=VC2380 VC2381 VC2381 VC2381 2545920 2546750 + hypothetical protein gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=VC2381 VC2382 VC2382 VC2382 2546833 2547453 + hypothetical protein gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=VC2382 VC2383 VC2383 VC2383 2547605 2548465 + LysR family transcriptional regulator similar to SP:Q01610 PID:45367%3B identified by sequence similarity gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=VC2383 VC2384 VC2384 VC2384 2548395 2549180 - hypothetical protein gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=VC2384 VC2385 VC2385 VC2385 2549642 2550613 + RNA-directed DNA polymerase similar to GB:Z12832 PID:42501%3B identified by sequence similarity gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=VC2385 VC2386 VC2386 VC2386 2550614 2552236 + hypothetical protein gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=VC2386 VC2387 VC2387 VC2387 2552249 2552866 + hypothetical protein gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=VC2387 VC2388 VC2388 VC2388 2553477 2553959 + hypothetical protein gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=VC2388 VC2389 VC2389 carB carB 2554049 2557279 - carbamoyl phosphate synthase large subunit four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=VC2389 VC2390 VC2390 VC2390 2557296 2558435 - carbamoyl phosphate synthase small subunit catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=VC2390 VC2391 VC2391 VC2391 2558918 2559727 - dihydrodipicolinate reductase 'catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis' gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=VC2391 VC2392 VC2392 VC2392 2559842 2560240 - mutator MutT protein similar to GB:D10483 SP:P08337 GB:M20791 GB:X04831 PID:147795%3B identified by sequence similarity gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=VC2392 VC2394 VC2394 secA secA 2560390 2563101 - preprotein translocase subunit SecA functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=VC2394 VC2395 VC2395 VC2395 2563455 2563928 + hypothetical protein gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=VC2395 VC2396 VC2396 lpxC lpxC 2564032 2564949 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=VC2396 VC2397 VC2397 VC2397 2565047 2566243 - cell division protein FtsZ 'GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function' gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=VC2397 VC2398 VC2398 ftsA ftsA 2566274 2567536 - cell division protein FtsA ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=VC2398 VC2399 VC2399 VC2399 2567529 2568311 - cell division protein FtsQ similar to GB:D10483 SP:P06136 GB:K02668 GB:X02821 PID:145725%3B identified by sequence similarity gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=VC2399 VC2400 VC2400 murC murC 2568493 2569953 - UDP-N-acetylmuramate--L-alanine ligase Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=VC2400 VC2401 VC2401 murG murG 2569967 2571031 - undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=VC2401 VC2402 VC2402 VC2402 2571015 2572211 - cell division protein FtsW similar to GB:D10483 SP:P16457 GB:M30807 PID:146039 PID:216503%3B identified by sequence similarity gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=VC2402 VC2403 VC2403 murD murD 2572228 2573562 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=VC2403 VC2404 VC2404 mraY mraY 2573574 2574656 - phospho-N-acetylmuramoyl-pentapeptide-transferase First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=VC2404 VC2405 VC2405 VC2405 2574653 2576014 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimelate--D-alanyl-D-alanyl ligase similar to GB:D10483 SP:P11880 PID:216500 PID:40854 PID:42048%3B identified by sequence similarity gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=VC2405 VC2406 VC2406 murE murE 2576011 2577549 - UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=VC2406 VC2407 VC2407 VC2407 2577515 2579257 - penicillin-binding protein 3 similar to GB:D10483 SP:P04286 GB:K00137 GB:S49802 GB:S49875%3B identified by sequence similarity gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=VC2407 VC2408 VC2408 VC2408 2579254 2579574 - cell division protein FtsL similar to SP:P22187 GB:K00137 GB:S49802 GB:S49875 GB:X52063%3B identified by sequence similarity gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=VC2408 VC2409 VC2409 mraW mraW 2579584 2580534 - S-adenosyl-methyltransferase MraW gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=VC2409 VC2412 VC2412 VC2412 2581292 2582719 - dihydrolipoamide dehydrogenase E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=VC2412 VC2413 VC2413 aceF aceF 2582987 2584894 - dihydrolipoamide acetyltransferase E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=VC2413 VC2414 VC2414 aceE aceE 2584895 2587555 - pyruvate dehydrogenase subunit E1 E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=VC2414 VC2415 VC2415 pdhR pdhR 2587605 2588375 - transcriptional regulator PdhR activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=VC2415 VC2416 VC2416 VC2416 2588859 2590763 + 2`%2C3`-cyclic-nucleotide 2`-phosphodiesterase similar to GB:AE000511 PID:2313187%3B identified by sequence similarity gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=VC2416 VC2417 VC2417 VC2417 2590808 2592547 - ssDNA exonuclease RecJ 5'-3' single-stranded-DNA-specific exonuclease gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=VC2417 VC2418 VC2418 VC2418 2592606 2593358 - thiol:disulfide interchange protein DsbC similar to GB:M54884 SP:P21892 PID:147549 PID:887843 GB:U00096%3B identified by sequence similarity gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=VC2418 VC2419 VC2419 xerD xerD 2593375 2594283 - site-specific tyrosine recombinase XerD site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=VC2419 VC2420 VC2420 VC2420 2594421 2594939 + flavodoxin FldB 'An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic' gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=VC2420 VC2421 VC2421 VC2421 2595217 2595762 - N-acetyl-anhydromuranmyl-L-alanine amidase similar to GB:D26562 SP:P13016 GB:L28105 GB:X15237 PID:40908%3B identified by sequence similarity gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=VC2421 VC2422 VC2422 VC2422 2596058 2596948 + quinolinate phosphoribosyltransferase 'catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide' gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=VC2422 VC2423 VC2423 VC2423 2597151 2597654 + fimbrial protein similar to GB:M24281 SP:P08015 SP:P17837 GB:M14850 PID:151463%3B identified by sequence similarity gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=VC2423 VC2424 VC2424 VC2424 2597654 2599342 + type IV pilus assembly protein PilB similar to GP:3220230%3B identified by sequence similarity gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=VC2424 VC2425 VC2425 VC2425 2599385 2600611 + type IV pilin biogenesis protein PilC similar to GP:3228677%3B identified by sequence similarity gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=VC2425 VC2426 VC2426 VC2426 2600669 2601544 + leader peptidase PilD similar to GP:3025799%3B identified by sequence similarity gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=VC2426 VC2427 VC2427 coaE coaE 2601508 2602149 + dephospho-CoA kinase catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=VC2427 VC2428 VC2428 VC2428 2602181 2602921 + hypothetical protein gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=VC2428 VC2429 VC2429 VC2429 2603063 2603260 + zinc-binding protein gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=VC2429 VC2430 VC2430 VC2430 2603309 2605594 - DNA topoisomerase IV subunit A decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=VC2430 VC2431 VC2431 VC2431 2605598 2607478 - DNA topoisomerase IV subunit B decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=VC2431 VC2432 VC2432 VC2432 2607807 2608394 - esterase Displays esterase activity toward palmitoyl-CoA and pNP-butyrate gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=VC2432 VC2433 VC2433 VC2433 2608396 2609214 - cyclic 3'%2C5'-adenosine monophosphate phosphodiesterase similar to GB:L42023 SP:P44685 PID:1003682 PID:1222327 PID:1204649%3B identified by sequence similarity gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=VC2433 VC2434 VC2434 VC2434 2609239 2609685 - hypothetical protein gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=VC2434 VC2435 VC2435 VC2435 2609692 2610318 - MutT/nudix family protein similar to SP:P36651 PID:882564 GB:U00096 PID:1789412%3B identified by sequence similarity gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=VC2435 VC2436 VC2436 tolC tolC 2610550 2611866 + outer membrane channel protein trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules%3B functions with a number of efflux systems in the inner membrane to transport molecules out of the cell gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=VC2436 VC2437 VC2437 VC2437 2611972 2613401 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=VC2437 VC2438 VC2438 VC2438 2613465 2616311 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=VC2438 VC2439 VC2439 VC2439 2616435 2617736 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=VC2439 VC2440 VC2440 VC2440 2618176 2619693 - hypothetical protein gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=VC2440 VC2441 VC2441 VC2441 2619893 2620579 + hypothetical protein gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=VC2441 VC2442 VC2442 VC2442 2620683 2621984 + pho4 family protein similar to GB:L42023 SP:P45268 PID:1007859 PID:1221747 PID:1205836%3B identified by sequence similarity gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=VC2442 VC2443 VC2443 VC2443 2622151 2622759 + hypothetical protein gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=VC2443 VC2444 VC2444 VC2444 2622851 2623621 - general secretion pathway protein B similar to GB:X81473 SP:P45755 PID:551217%3B identified by sequence similarity gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=VC2444 VC2445 VC2445 VC2445 2623621 2625210 - general secretion pathway protein A similar to GB:X81473 SP:P45754 PID:551216%3B identified by sequence similarity gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=VC2445 VC2446 VC2446 cca cca 2625303 2626514 + multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 'catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases' gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=VC2446 VC2447 VC2447 eno eno 2626616 2627917 - phosphopyruvate hydratase enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=VC2447 VC2448 VC2448 pyrG pyrG 2627996 2629633 - CTP synthetase CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=VC2448 VC2450 VC2450 mazG mazG 2629908 2630723 - nucleoside triphosphate pyrophosphohydrolase functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase protein Era gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=VC2450 VC2451 VC2451 VC2451 2630823 2633039 - GTP pyrophosphokinase similar to GB:U13769 PID:537617 SP:P55133%3B identified by sequence similarity gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=VC2451 VC2452 VC2452 rumA rumA 2633103 2634425 - 23S rRNA 5-methyluridine methyltransferase in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S] gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=VC2452 VC2453 VC2453 VC2453 2634597 2637380 + hybrid sensory histidine kinase BarA part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=VC2453 VC2454 VC2454 VC2454 2637368 2638660 - GGDEF family protein similar to GB:U00096 PID:1787766 GB:U00096 PID:1787766%3B identified by sequence similarity gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=VC2454 VC2455 VC2455 VC2455 2638653 2639063 - hypothetical protein gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=VC2455 VC2456 VC2456 VC2456 2639073 2640410 - hypothetical protein gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=VC2456 VC2457 VC2457 acpS acpS 2640613 2640993 - 4'-phosphopantetheinyl transferase 'Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids' gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=VC2457 VC2458 VC2458 VC2458 2640997 2641728 - pyridoxine 5'-phosphate synthase involved in the de novo synthesis of pyridoxine (Vitamin B6) gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=VC2458 VC2459 VC2459 recO recO 2641725 2642450 - DNA repair protein RecO involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=VC2459 VC2460 VC2460 era era 2642520 2643497 - GTP-binding protein Era Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=VC2460 VC2461 VC2461 rnc rnc 2643490 2644167 - ribonuclease III cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=VC2461 VC2462 VC2462 VC2462 2644199 2645095 - signal peptidase I similar to SP:P23697 GB:X52093 GB:X54933 PID:47757%3B identified by sequence similarity gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=VC2462 VC2463 VC2463 VC2463 2645187 2646980 - GTP-binding protein LepA binds to the ribosome on the universally-conserved alpha-sarcin loop gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=VC2463 VC2464 VC2464 VC2464 2647093 2647563 - sigma-E factor regulatory protein RseC similar to SP:P46187 PID:987645 PID:1045631 PID:1050877 GB:U00096%3B identified by sequence similarity gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=VC2464 VC2465 VC2465 rseB rseB 2647560 2648525 - periplasmic negative regulator of sigmaE periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=VC2465 VC2466 VC2466 VC2466 2648522 2649160 - sigma-E factor negative regulatory protein RseA similar to SP:P38106 GB:U10148 GB:U00096 PID:1788925 PID:987647%3B identified by sequence similarity gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=VC2466 VC2467 VC2467 VC2467 2649174 2649746 - RNA polymerase sigma factor RpoE Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=VC2467 VC2469 VC2469 VC2469 2650206 2651858 + L-aspartate oxidase catalyzes the formation of oxaloacetate from L-aspartate gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=VC2469 VC2470 VC2470 VC2470 2651883 2652245 - hypothetical protein gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=VC2470 VC2471 VC2471 VC2471 2652277 2652537 - hypothetical protein gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=VC2471 VC2472 VC2472 VC2472 2652690 2653661 + hypothetical protein gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=VC2472 VC2473 VC2473 VC2473 2654268 2654501 + hypothetical protein gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=VC2473 VC2474 VC2474 VC2474 2654602 2655831 - 2-octaprenyl-6-methoxyphenol hydroxylase 'catalyzes the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone from 2-octaprenyl-6-methoxyphenol' gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=VC2474 VC2475 VC2475 VC2475 2655843 2657051 - 2-octaprenyl-6-methoxyphenyl hydroxylase 'Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone' gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=VC2475 VC2476 VC2476 VC2476 2657072 2657646 - gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=VC2476 VC2478 VC2478 VC2478 2657888 2658196 + hypothetical protein gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=VC2478 VC2479 VC2479 VC2479 2658396 2658980 + hypothetical protein gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=VC2479 VC2480 VC2480 VC2480 2659090 2659746 + ribose-5-phosphate isomerase A Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=VC2480 VC2481 VC2481 VC2481 2660000 2661229 + D-3-phosphoglycerate dehydrogenase catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=VC2481 VC2482 VC2482 ilvH ilvH 2661461 2661955 - acetolactate synthase 3 regulatory subunit 'with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit' gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=VC2482 VC2483 VC2483 VC2483 2661957 2663678 - acetolactate synthase 3 catalytic subunit with IlvH catalyzes the formation of 2-acetolactate from pyruvate gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=VC2483 VC2484 VC2484 VC2484 2664163 2665968 - long-chain-fatty-acid--CoA ligase similar to GB:L42023 SP:P44446 PID:1004105 PID:1221904 PID:1204261%3B identified by sequence similarity gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=VC2484 VC2485 VC2485 leuO leuO 2666145 2667110 - leucine transcriptional activator activator for leuABCD operon%3B member of LysR family of transcriptional activators gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=VC2485 VC2487 VC2487 VC2487 2667410 2668498 - hypothetical protein gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=VC2487 VC2488 VC2488 VC2488 2668495 2669031 - hypothetical protein gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=VC2488 VC2489 VC2489 VC2489 2669158 2669793 - TetR family transcriptional regulator similar to GB:AL123456%3B identified by sequence similarity gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=VC2489 VC2490 VC2490 VC2490 2670176 2671726 + 2-isopropylmalate synthase catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=VC2490 VC2491 VC2491 VC2491 2671838 2672929 + 3-isopropylmalate dehydrogenase catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=VC2491 VC2492 VC2492 VC2492 2672987 2674390 + isopropylmalate isomerase large subunit 'dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate' gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=VC2492 VC2493 VC2493 leuD leuD 2674406 2675008 + isopropylmalate isomerase small subunit catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=VC2493 VC2494 VC2494 VC2494 2675109 2675900 + hypothetical protein gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=VC2494 VC2497 VC2497 VC2497 2681920 2683173 - hypothetical protein gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=VC2497 VC2498 VC2498 VC2498 2683604 2684086 + hypothetical protein gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=VC2498 VC2499 VC2499 VC2499 2684192 2685262 - hypothetical protein gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=VC2499 VC2500 VC2500 VC2500 2685266 2686366 - hypothetical protein gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=VC2500 VC2501 VC2501 VC2501 2686560 2688071 + leucyl aminopeptidase catalyzes the removal of N-terminal amino acids preferably leucine from various peptides gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=VC2501 VC2502 VC2502 VC2502 2688155 2688604 + DNA polymerase III subunit chi binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=VC2502 VC2503 VC2503 valS valS 2688698 2691559 + valyl-tRNA synthetase valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val)%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=VC2503 VC2504 VC2504 VC2504 2691637 2692614 - D-lactate dehydrogenase 'Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate%2C alpha-ketoglutarate%2C and to a much lower extent%2C KHTCA%2C but not pyruvate. Involved in the biosynthes' gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=VC2504 VC2505 VC2505 VC2505 2692654 2693391 - ribosomal large subunit pseudouridine synthase A similar to SP:P39219 GB:U00096 PID:1786244%3B identified by sequence similarity gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=VC2505 VC2506 VC2506 VC2506 2693488 2696397 - ATP-dependent helicase HepA 'transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA' gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=VC2506 VC2507 VC2507 VC2507 2696819 2698195 + hypothetical protein gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=VC2507 VC2508 VC2508 VC2508 2698345 2699349 + ornithine carbamoyltransferase catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=VC2508 VC2510 VC2510 pyrB pyrB 2699599 2700528 + aspartate carbamoyltransferase catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=VC2510 VC2511 VC2511 VC2511 2700540 2701007 + aspartate carbamoyltransferase involved in the allosteric regulation of aspartate carbamoyltransferase gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=VC2511 VC2512 VC2512 VC2512 2701112 2701501 + hypothetical protein gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=VC2512 VC2513 VC2513 VC2513 2701582 2702367 - 1-acyl-sn-glycerol-3-phosphate acyltransferase similar to GB:M68936 SP:P26974 PID:154236%3B identified by sequence similarity gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=VC2513 VC2514 VC2514 VC2514 2702389 2703648 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=VC2514 VC2515 VC2515 VC2515 2703656 2703910 - BolA/YrbA family protein similar to SP:P43781 PID:606128 GB:U00096 PID:1789581%3B identified by sequence similarity gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=VC2515 VC2516 VC2516 VC2516 2703903 2704232 - anti-sigma B factor antagonist similar to SP:P45389 PID:606129 GB:U00096 PID:1789582%3B identified by sequence similarity gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=VC2516 VC2517 VC2517 VC2517 2704229 2704870 - hypothetical protein gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=VC2517 VC2518 VC2518 VC2518 2704871 2705362 - hypothetical protein gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=VC2518 VC2519 VC2519 VC2519 2705365 2706141 - hypothetical protein gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=VC2519 VC2520 VC2520 VC2520 2706146 2706949 - ABC transporter ATP-binding protein similar to SP:P45393 PID:606133 GB:U00096 PID:1789586%3B identified by sequence similarity gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=VC2520 VC2522 VC2522 VC2522 2707506 2708504 + hypothetical protein gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=VC2522 VC2523 VC2523 VC2523 2708554 2709534 + hypothetical protein gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=VC2523 VC2524 VC2524 VC2524 2709534 2710091 + 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=VC2524 VC2525 VC2525 VC2525 2710088 2710651 + hypothetical protein gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=VC2525 VC2527 VC2527 VC2527 2710587 2711126 + hypothetical protein gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=VC2527 VC2528 VC2528 VC2528 2711129 2711854 + ABC transporter ATP-binding protein similar to PID:2317737%3B identified by sequence similarity gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=VC2528 VC2529 VC2529 VC2529 2711910 2713373 + RNA polymerase factor sigma-54 'sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen' gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=VC2529 VC2530 VC2530 VC2530 2713398 2713685 + sigma-54 modulation protein similar to PID:2317739%3B identified by sequence similarity gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=VC2530 VC2531 VC2531 VC2531 2713688 2714134 + PTS system nitrogen regulatory subunit IIA similar to PID:2317740%3B identified by sequence similarity gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=VC2531 VC2532 VC2532 VC2532 2714147 2715007 + hypothetical protein gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=VC2532 VC2533 VC2533 VC2533 2715016 2715294 + phosphocarrier protein NPr similar to SP:P33996 GB:Z27094 PID:414889 PID:551342 PID:606145%3B identified by sequence similarity gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=VC2533 VC2534 VC2534 VC2534 2715455 2716816 + magnesium transporter similar to GB:AL009126%3B identified by sequence similarity gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=VC2534 VC2535 VC2535 tldE tldE 2716888 2718231 - peptidase PmbA protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=VC2535 VC2536 VC2536 VC2536 2718330 2718911 + hypothetical protein gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=VC2536 VC2537 VC2537 VC2537 2719014 2719748 - thiamine ABC transporter ATP-binding protein similar to GB:D10483 SP:P31548 PID:216486 GB:U00096 PID:1786253%3B identified by sequence similarity gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=VC2537 VC2538 VC2538 thiP thiP 2719742 2721334 - thiamine transporter membrane protein permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=VC2538 VC2539 VC2539 tbpA tbpA 2721344 2722336 - thiamine transporter substrate binding subunit part of the thiamine and TPP transport system tbpA-thiPQ gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=VC2539 VC2540 VC2540 VC2540 2722206 2722598 - hypothetical protein gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=VC2540 VC2541 VC2541 VC2541 2722598 2723233 - aromatic acid decarboxylase catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=VC2541 VC2542 VC2542 VC2542 2723240 2724595 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase similar to GB:U14003 SP:P37773 PID:537075 GB:U00096 PID:1790680%3B identified by sequence similarity gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=VC2542 VC2544 VC2544 VC2544 2724901 2725911 + fructose-1%2C6-bisphosphatase 'catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate' gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=VC2544 VC2545 VC2545 VC2545 2726081 2726611 + inorganic pyrophosphatase catalyzes the hydrolysis of pyrophosphate to phosphate gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=VC2545 VC2546 VC2546 VC2546 2726671 2727018 - hypothetical protein gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=VC2546 VC2547 VC2547 VC2547 2727029 2730793 - hypothetical protein gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=VC2547 VC2548 VC2548 VC2548 2730790 2732538 - hypothetical protein gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=VC2548 VC2549 VC2549 VC2549 2732684 2733322 + methionine sulfoxide reductase A this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=VC2549 VC2550 VC2550 VC2550 2733404 2733955 + hypothetical protein gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=VC2550 VC2551 VC2551 VC2551 2734173 2734478 + hypothetical protein gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=VC2551 VC2552 VC2552 VC2552 2734527 2735255 + hypothetical protein gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=VC2552 VC2553 VC2553 VC2553 2735337 2736053 + ABC transporter ATP-binding protein%2C authentic frameshift identified by match to PFAM protein family HMM PF00005 gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=VC2553 VC2554 VC2554 VC2554 2736044 2737309 + hypothetical protein gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=VC2554 VC2555 VC2555 VC2555 2737362 2737883 + hypothetical protein gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=VC2555 VC2557 VC2557 VC2557 2738194 2739092 + gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=VC2557 VC2558 VC2558 VC2558 2739165 2739812 - adenylylsulfate kinase converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=VC2558 VC2559 VC2559 cysN cysN 2739823 2741253 - sulfate adenylyltransferase subunit 1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=VC2559 VC2560 VC2560 VC2560 2741271 2742179 - sulfate adenylyltransferase subunit 2 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=VC2560 VC2561 VC2561 VC2561 2742282 2743181 - uroporphyrin-III C-methyltransferase 'catalyzes 2 sequential methylations%2C the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III%2C and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1' gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=VC2561 VC2562 VC2562 cpdB cpdB 2743466 2745427 + bifunctional 2'%2C3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase 'periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate' gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=VC2562 VC2563 VC2563 VC2563 2745547 2746116 + hypothetical protein gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=VC2563 VC2564 VC2564 VC2564 2746119 2747501 - ATP-dependent RNA helicase DbpA 'exhibits an RNA-dependent ATPase activity%2C specifically stimulated by bacterial 23S rRNA' gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=VC2564 VC2565 VC2565 VC2565 2747727 2748176 + ElaA protein similar to SP:P52077 GB:U00096 PID:1381660 PID:1788602%3B identified by sequence similarity gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=VC2565 VC2566 VC2566 VC2566 2748179 2748988 + hypothetical protein gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=VC2566 VC2567 VC2567 VC2567 2748938 2749510 - hypothetical protein gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=VC2567 VC2568 VC2568 VC2568 2749721 2750350 + FKBP-type peptidylprolyl isomerase similar to GB:U14003 SP:P39311 PID:537048 GB:U00096 PID:1790652%3B identified by sequence similarity gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=VC2568 VC2569 VC2569 VC2569 2750486 2750968 + hypothetical protein gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=VC2569 VC2570 VC2570 rplQ rplQ 2751112 2751498 - 50S ribosomal protein L17 is a component of the macrolide binding site in the peptidyl transferase center gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=VC2570 VC2571 VC2571 VC2571 2751525 2752517 - DNA-directed RNA polymerase subunit alpha catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=VC2571 VC2572 VC2572 rpsD rpsD 2752542 2753162 - 30S ribosomal protein S4 primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=VC2572 VC2573 VC2573 VC2573 2753190 2753579 - 30S ribosomal protein S11 'located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3' gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=VC2573 VC2574 VC2574 rpsM rpsM 2753599 2753955 - 30S ribosomal protein S13 'located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA' gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=VC2574 VC2575 VC2575 rpmJ rpmJ 2754105 2754218 - 50S ribosomal protein L36 smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=VC2575 VC2576 VC2576 secY secY 2754257 2755591 - preprotein translocase subunit SecY forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=VC2576 VC2577 VC2577 rplO rplO 2755612 2756046 - 50S ribosomal protein L15 late assembly protein gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=VC2577 VC2578 VC2578 rpmD rpmD 2756052 2756228 - 50S ribosomal protein L30 L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7 gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=VC2578 VC2579 VC2579 rpsE rpsE 2756235 2756738 - 30S ribosomal protein S5 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=VC2579 VC2580 VC2580 rplR rplR 2756753 2757106 - 50S ribosomal protein L18 binds 5S rRNA along with protein L5 and L25 gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=VC2580 VC2581 VC2581 rplF rplF 2757116 2757649 - 50S ribosomal protein L6 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7/L12 stalk and the central protuberance gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=VC2581 VC2582 VC2582 rpsH rpsH 2757664 2758056 - 30S ribosomal protein S8 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=VC2582 VC2583 VC2583 rpsN rpsN 2758086 2758391 - 30S ribosomal protein S14 'located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif' gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=VC2583 VC2584 VC2584 rplE rplE 2758409 2758948 - 50S ribosomal protein L5 part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13 gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=VC2584 VC2585 VC2585 rplX rplX 2758973 2759290 - 50S ribosomal protein L24 assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=VC2585 VC2586 VC2586 rplN rplN 2759303 2759674 - 50S ribosomal protein L14 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=VC2586 VC2587 VC2587 rpsQ rpsQ 2759837 2760091 - 30S ribosomal protein S17 primary binding protein%3B helps mediate assembly%3B involved in translation fidelity gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=VC2587 VC2588 VC2588 rpmC rpmC 2760091 2760282 - 50S ribosomal protein L29 one of the stabilizing components for the large ribosomal subunit gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=VC2588 VC2589 VC2589 rplP rplP 2760282 2760692 - 50S ribosomal protein L16 located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=VC2589 VC2590 VC2590 rpsC rpsC 2760704 2761405 - 30S ribosomal protein S3 forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=VC2590 VC2591 VC2591 rplV rplV 2761425 2761757 - 50S ribosomal protein L22 binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=VC2591 VC2592 VC2592 rpsS rpsS 2761768 2762046 - 30S ribosomal protein S19 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=VC2592 VC2593 VC2593 rplB rplB 2762067 2762891 - 50S ribosomal protein L2 'one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation' gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=VC2593 VC2594 VC2594 rplW rplW 2762908 2763210 - 50S ribosomal protein L23 binds third domain of 23S rRNA and protein L29%3B part of exit tunnel gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=VC2594 VC2595 VC2595 rplD rplD 2763207 2763809 - 50S ribosomal protein L4 L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=VC2595 VC2596 VC2596 rplC rplC 2763826 2764455 - 50S ribosomal protein L3 'binds directly near the 3' end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin' gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=VC2596 VC2597 VC2597 rpsJ rpsJ 2764470 2764781 - 30S ribosomal protein S10 'NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex' gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=VC2597 VC2598 VC2598 VC2598 2765252 2765995 - 23S rRNA (guanosine-2'-O-)-methyltransferase Specifically methylates the ribose of guanosine 2251 in 23S rRNA gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=VC2598 VC2599 VC2599 VC2599 2766003 2768468 - ribonuclease R similar to GB:U14003 SP:P21499 PID:537020 GB:U00096 PID:1790622%3B identified by sequence similarity gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=VC2599 VC2600 VC2600 VC2600 2768612 2770480 + hypothetical protein gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=VC2600 VC2601 VC2601 VC2601 2770507 2771142 - sodium-type flagellar protein MotX similar to GB:U09005 SP:P40608 PID:507737%3B identified by sequence similarity gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=VC2601 VC2602 VC2602 VC2602 2771350 2772648 - adenylosuccinate synthetase 'catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis' gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=VC2602 VC2603 VC2603 VC2603 2772776 2773756 - asparaginase similar to SP:P37595 GB:U00096 PID:1787050%3B identified by sequence similarity gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=VC2603 VC2604 VC2604 VC2604 2773919 2774524 - FKBP-type peptidylprolyl isomerase similar to GB:L13261 SP:P30856 GB:Z21496 PID:394720 PID:475995%3B identified by sequence similarity gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=VC2604 VC2605 VC2605 VC2605 2774616 2774816 - hypothetical protein gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=VC2605 VC2606 VC2606 VC2606 2774826 2776628 - glutathione-regulated potassium-efflux system protein KefB involved in potassium efflux gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=VC2606 VC2607 VC2607 VC2607 2776609 2777199 - glutathione-regulated potassium-efflux system ancillary protein KefG required for KefB activity gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=VC2607 VC2608 VC2608 VC2608 2777323 2779239 + ABC transporter ATP-binding protein similar to SP:P45535 PID:606286 GB:U00096 PID:1789751%3B identified by sequence similarity gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=VC2608 VC2609 VC2609 VC2609 2779240 2779725 + hypothetical protein gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=VC2609 VC2610 VC2610 VC2610 2779722 2780711 + hydrolase gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=VC2610 VC2612 VC2612 VC2612 2780839 2781048 + hypothetical protein gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=VC2612 VC2613 VC2613 VC2613 2781145 2782014 + phosphoribulokinase similar to SP:P37307 PID:606289 GB:U00096 PID:2367214%3B identified by sequence similarity gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=VC2613 VC2614 VC2614 VC2614 2782257 2782889 + cAMP-regulatory protein complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=VC2614 VC2615 VC2615 VC2615 2782968 2783759 - hypothetical protein gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=VC2615 VC2616 VC2616 astD astD 2783902 2785359 - succinylglutamic semialdehyde dehydrogenase a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity%3B converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=VC2616 VC2617 VC2617 VC2617 2785369 2786388 - arginine/ornithine succinyltransferase similar to GB:U00096 PID:1788043%3B identified by sequence similarity gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=VC2617 VC2618 VC2618 argD argD 2786528 2787739 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 'DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate' gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=VC2618 VC2619 VC2619 VC2619 2788137 2788718 - para-aminobenzoate synthase component II aminodeoxychorismate synthase subunit PabA%3B with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis%3B PabA provides the glutamine amidotransferase activity gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=VC2619 VC2620 VC2620 rimO rimO 2788972 2790384 + ribosomal protein S12 methylthiotransferase catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=VC2620 VC2621 VC2621 VC2621 2790458 2793067 - extracellular nuclease-like protein similar to PID:1185049%3B identified by sequence similarity gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=VC2621 VC2622 VC2622 VC2622 2793337 2794110 - hypothetical protein gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=VC2622 VC2623 VC2623 VC2623 2794267 2795283 - tryptophanyl-tRNA synthetase 'catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA' gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=VC2623 VC2624 VC2624 VC2624 2795411 2796091 - phosphoglycolate phosphatase catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=VC2624 VC2625 VC2625 VC2625 2796111 2796821 - ribulose-phosphate 3-epimerase catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=VC2625 VC2626 VC2626 VC2626 2796912 2797745 - DNA adenine methylase similar to GB:J01600 SP:P00475 GB:V00272 GB:Z19601 PID:145706%3B identified by sequence similarity gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=VC2626 VC2627 VC2627 VC2627 2797815 2799290 - DamX-like protein similar to SP:P11557 GB:Z19601 PID:41226 PID:43274 PID:606322%3B identified by sequence similarity gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=VC2627 VC2628 VC2628 aroB aroB 2799345 2800445 - 3-dehydroquinate synthase catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=VC2628 VC2629 VC2629 aroK aroK 2800458 2800982 - shikimate kinase I type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=VC2629 VC2630 VC2630 VC2630 2801169 2802905 - fimbrial assembly protein similar to GB:L13865 SP:P34750 PID:459551%3B identified by sequence similarity gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=VC2630 VC2631 VC2631 VC2631 2802910 2803428 - fimbrial assembly protein PilP similar to PID:1173874 PID:1914828%3B identified by sequence similarity gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=VC2631 VC2632 VC2632 VC2632 2803418 2804017 - fimbrial assembly protein PilO similar to GB:U12892 PID:530858%3B identified by sequence similarity gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=VC2632 VC2633 VC2633 VC2633 2804001 2804591 - fimbrial assembly protein PilN similar to GB:U12892 PID:530857%3B identified by sequence similarity gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=VC2633 VC2634 VC2634 VC2634 2804575 2805591 - fimbrial assembly protein PilM similar to GB:L28837 PID:895925%3B identified by sequence similarity gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=VC2634 VC2635 VC2635 VC2635 2805704 2808211 + penicillin-binding protein 1A similar to SP:P02918 GB:X02164 PID:581194 PID:606330 GB:U00096%3B identified by sequence similarity gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=VC2635 VC2636 VC2636 VC2636 2808285 2809178 - DNA-binding transcriptional regulator OxyR 'Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA' gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=VC2636 VC2637 VC2637 VC2637 2809306 2810049 + peroxiredoxin family protein/glutaredoxin similar to GB:L42023 PID:1004026 PID:1222510 PID:1204821 SP:P44758%3B identified by sequence similarity gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=VC2637 VC2638 VC2638 VC2638 2810121 2811575 + dihydrolipoamide dehydrogenase Catalyzes the oxidation of dihydrolipoamide to lipoamide gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=VC2638 VC2640 VC2640 VC2640 2811801 2812064 + hypothetical protein gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=VC2640 VC2641 VC2641 VC2641 2812315 2813691 - argininosuccinate lyase catalyzes the formation of arginine from (N-L-arginino)succinate gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=VC2641 VC2642 VC2642 VC2642 2813924 2815138 - argininosuccinate synthase 'catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis%2C AMP-forming' gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=VC2642 VC2643 VC2643 VC2643 2815214 2816002 - acetylglutamate kinase catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=VC2643 VC2644 VC2644 argC argC 2816012 2817013 - N-acetyl-gamma-glutamyl-phosphate reductase 'catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis%3B involved in both the arginine and lysine biosynthetic pathways%3B lysine is produced via the AAA pathway%2C lysine from alpha-aminoadipate' gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=VC2644 VC2645 VC2645 VC2645 2817169 2818305 + acetylornithine deacetylase catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=VC2645 VC2646 VC2646 VC2646 2818512 2821142 + phosphoenolpyruvate carboxylase catalyzes the formation of oxaloacetate from phosphoenolpyruvate gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=VC2646 VC2647 VC2647 VC2647 2821501 2822040 + hypothetical protein gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=VC2647 VC2649 VC2649 cysE cysE 2822156 2822977 - serine acetyltransferase catalyzes the O-acetylation of serine gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=VC2649 VC2650 VC2650 VC2650 2822864 2823175 + hypothetical protein gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=VC2650 VC2651 VC2651 gpsA gpsA 2823050 2824084 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=VC2651 VC2652 VC2652 VC2652 2824217 2824387 + hypothetical protein gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=VC2652 VC2653 VC2653 VC2653 2824274 2824738 - preprotein translocase subunit SecB molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=VC2653 VC2654 VC2654 VC2654 2824905 2825339 - hypothetical protein gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=VC2654 VC2655 VC2655 VC2655 2825469 2826443 - lysyl-tRNA synthetase lysine--tRNA ligase beta chain%3B poxA%3B class II aminoacyl tRNA synthetase%3B catalyzes a two-step reaction%3B first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=VC2655 VC2656 VC2656 VC2656 2826752 2828560 + fumarate reductase flavoprotein subunit 'part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB' gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=VC2656 VC2657 VC2657 VC2657 2828560 2829318 + fumarate reductase iron-sulfur subunit 'part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB' gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=VC2657 VC2658 VC2658 VC2658 2829321 2829704 + fumarate reductase subunit C 'part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB' gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=VC2658 VC2659 VC2659 VC2659 2829685 2830077 + fumarate reductase subunit D in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=VC2659 VC2660 VC2660 VC2660 2830191 2830757 - elongation factor P Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=VC2660 VC2661 VC2661 VC2661 2830790 2831812 + hypothetical protein gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=VC2661 VC2662 VC2662 VC2662 2831849 2832424 - hypothetical protein gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=VC2662 VC2664 VC2664 groEL groEL 2832620 2834254 - molecular chaperone GroEL '60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth' gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=VC2664 VC2665 VC2665 groES groES 2834308 2834598 - co-chaperonin GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=VC2665 VC2666 VC2666 VC2666 2834958 2835575 + hypothetical protein gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=VC2666 VC2667 VC2667 VC2667 2835714 2836073 + hypothetical protein gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=VC2667 VC2668 VC2668 VC2668 2836200 2836640 - hypothetical protein gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=VC2668 VC2669 VC2669 VC2669 2836660 2837010 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase similar to GB:X53666 GB:Z37980 SP:Q05354 PID:41106 PID:757829%3B identified by sequence similarity gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=VC2669 VC2670 VC2670 tpiA tpiA 2837230 2838027 + triosephosphate isomerase Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=VC2670 VC2671 VC2671 VC2671 2838145 2839527 + hypothetical protein gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=VC2671 VC2672 VC2672 VC2672 2839613 2840128 - ribonuclease activity regulator protein RraA regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=VC2672 VC2673 VC2673 VC2673 2840203 2841120 - 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase 'catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate' gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=VC2673 VC2674 VC2674 hslU hslU 2841224 2842555 - ATP-dependent protease ATP-binding subunit HslU heat shock protein involved in degradation of misfolded proteins gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=VC2674 VC2675 VC2675 VC2675 2842621 2843178 - ATP-dependent protease peptidase subunit heat shock protein involved in degradation of misfolded proteins gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=VC2675 VC2676 VC2676 VC2676 2843315 2843866 - cell division protein FtsN similar to GB:L19201 SP:P29131 GB:L14281 PID:290448 PID:305036%3B identified by sequence similarity gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=VC2676 VC2677 VC2677 VC2677 2844038 2845045 - DNA-binding transcriptional regulator CytR 'negatively controls the transcription initiation of genes such as deoCABD%2C udp%2C and cdd encoding catabolizing enzymes and nupC%2C nupG%2C and tsx encoding transporting and pore-forming proteins' gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=VC2677 VC2678 VC2678 VC2678 2845351 2847555 - primosome assembly protein PriA 'binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity' gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=VC2678 VC2679 VC2679 rpmE rpmE 2847810 2848028 + 50S ribosomal protein L31 'RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome' gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=VC2679 VC2681 VC2681 VC2681 2848336 2849613 + malate oxidoreductase similar to PID:1902828%3B identified by sequence similarity gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=VC2681 VC2682 VC2682 VC2682 2849724 2850041 - transcriptional repressor protein MetJ when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=VC2682 VC2683 VC2683 VC2683 2850309 2851475 + cystathionine gamma-synthase catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=VC2683 VC2684 VC2684 metL metL 2851488 2853899 + bifunctional aspartate kinase II/homoserine dehydrogenase II multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=VC2684 VC2685 VC2685 metF metF 2854186 2855073 + 5%2C10-methylenetetrahydrofolate reductase 'MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor' gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=VC2685 VC2686 VC2686 VC2686 2855136 2855378 - hypothetical protein gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=VC2686 VC2688 VC2688 glpX glpX 2855699 2856706 + fructose 1%2C6-bisphosphatase II 'type II fructose 1%2C6-bisphosphatae%3B in Escherichia coli this protein forms a dimer and binds manganese' gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=VC2688 VC2689 VC2689 pfkA pfkA 2856783 2857778 - 6-phosphofructokinase 'catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis' gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=VC2689 VC2690 VC2690 fieF fieF 2858008 2858916 - ferrous iron efflux protein F 'member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers' gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=VC2690 VC2691 VC2691 cpxP cpxP 2859114 2859617 - periplasmic repressor CpxP repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=VC2691 VC2692 VC2692 VC2692 2859805 2860491 + transcriptional regulator CpxR similar to GB:L19201 SP:P16244 GB:L14579 GB:X13307 PID:145589%3B identified by sequence similarity gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=VC2692 VC2693 VC2693 cpxA cpxA 2860491 2861885 + two-component sensor protein part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=VC2693 VC2694 VC2694 VC2694 2861967 2862635 + superoxide dismutase similar to GB:X62682 SP:P28760 PID:39453%3B identified by sequence similarity gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=VC2694 VC2695 VC2695 VC2695 2862688 2863164 + rRNA methylase similar to SP:P33899 PID:466744 GB:U00096 PID:1790034%3B identified by sequence similarity gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=VC2695 VC2696 VC2696 fxsA fxsA 2863198 2863683 - FxsA protein F exclusion of bacteriophage T7%3B overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7%3B interacts with the F plasmid-encoded PifA protein%3B inner membrane protein gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=VC2696 VC2697 VC2697 VC2697 2863775 2864713 - GGDEF family protein similar to PID:576655 PID:576657%3B identified by sequence similarity gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=VC2697 VC2698 VC2698 aspA aspA 2864958 2866409 + aspartate ammonia-lyase catalyzes the formation of fumarate from aspartate gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=VC2698 VC2699 VC2699 VC2699 2866537 2867844 + anaerobic C4-dicarboxylate transporter functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=VC2699 VC2700 VC2700 VC2700 2868277 2871836 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=VC2700 VC2701 VC2701 dipZ dipZ 2871996 2873798 + thiol:disulfide interchange protein two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=VC2701 VC2702 VC2702 VC2702 2873971 2874600 + LuxR family transcriptional regulator similar to GB:M60805 SP:P29369 PID:151239%3B identified by sequence similarity gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=VC2702 VC2703 VC2703 cvrA cvrA 2874699 2876444 - potassium/proton antiporter the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=VC2703 VC2704 VC2704 VC2704 2876823 2877089 + hypothetical protein gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=VC2704 VC2705 VC2705 VC2705 2877100 2878803 + sodium/solute symporter similar to GB:AE000657%3B identified by sequence similarity gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=VC2705 VC2706 VC2706 VC2706 2878901 2879572 - hypothetical protein gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=VC2706 VC2708 VC2708 gmk gmk 2879941 2880564 + guanylate kinase 'Essential for recycling GMP and indirectly%2C cGMP' gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=VC2708 VC2709 VC2709 rpoZ rpoZ 2880672 2880944 + DNA-directed RNA polymerase subunit omega promotes RNA polymerase assembly or stability%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=VC2709 VC2710 VC2710 VC2710 2880976 2883093 + bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase similar to GB:L10328 SP:P17580 GB:M24503 PID:290500 PID:551840%3B identified by sequence similarity gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=VC2710 VC2711 VC2711 VC2711 2883212 2885290 + ATP-dependent DNA helicase RecG catalyzes branch migration in Holliday junction intermediates gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=VC2711 VC2712 VC2712 VC2712 2885599 2887041 + xanthine/uracil permease family protein similar to GB:L10328 SP:P27432 PID:290504 GB:U00096 PID:1790087%3B identified by sequence similarity gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=VC2712 VC2713 VC2713 envZ envZ 2887066 2888382 - osmolarity sensor protein membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=VC2713 VC2714 VC2714 ompR ompR 2888451 2889173 - osmolarity response regulator part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=VC2714 VC2715 VC2715 greB greB 2889311 2889796 - transcription elongation factor GreB 'necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus' gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=VC2715 VC2716 VC2716 VC2716 2890041 2892362 + hypothetical protein gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=VC2716 VC2717 VC2717 VC2717 2892454 2892951 - hypothetical protein gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=VC2717 VC2718 VC2718 VC2718 2893086 2893892 - pimeloyl-ACP carboxylesterase similar to SP:P13001 GB:X15587 PID:41068 PID:606347 GB:U00096%3B identified by sequence similarity gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=VC2718 VC2719 VC2719 VC2719 2893783 2894643 + ComF-like protein similar to SP:P46846 PID:606348 GB:U00096 PID:1789818%3B identified by sequence similarity gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=VC2719 VC2720 VC2720 VC2720 2894731 2895318 + DNA uptake protein cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=VC2720 VC2721 VC2721 nudE nudE 2895457 2896005 + ADP-ribose diphosphatase NudE ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=VC2721 VC2722 VC2722 VC2722 2896028 2896855 + cysQ protein similar to SP:P70714 PID:1651207%3B identified by sequence similarity gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=VC2722 VC2723 VC2723 VC2723 2896907 2897665 - general secretion pathway protein N similar to SP:P45784 PID:609635%3B identified by sequence similarity gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=VC2723 VC2724 VC2724 VC2724 2897667 2898167 - cholera toxin secretion protein EpsM similar to GB:L13660 SP:P41851 PID:407330 PID:609634%3B identified by sequence similarity gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=VC2724 VC2725 VC2725 VC2725 2898174 2899397 - general secretion pathway protein L similar to SP:P45782 PID:609633%3B identified by sequence similarity gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=VC2725 VC2726 VC2726 VC2726 2899354 2900364 - general secretion pathway protein K similar to SP:P45781 PID:609632%3B identified by sequence similarity gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=VC2726 VC2727 VC2727 VC2727 2900354 2901019 - general secretion pathway protein J similar to SP:P45776 PID:609631%3B identified by sequence similarity gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=VC2727 VC2728 VC2728 VC2728 2901006 2901359 - general secretion pathway protein I similar to SP:P45775 PID:609630%3B identified by sequence similarity gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=VC2728 VC2729 VC2729 VC2729 2901349 2901933 - general secretion pathway protein H similar to SP:P45774 PID:609629%3B identified by sequence similarity gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=VC2729 VC2730 VC2730 VC2730 2901967 2902407 - general secretion pathway protein G similar to SP:P45773 PID:609628%3B identified by sequence similarity gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=VC2730 VC2731 VC2731 VC2731 2902448 2903668 - general secretion pathway protein F similar to SP:P45780 PID:609627%3B identified by sequence similarity gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=VC2731 VC2732 VC2732 VC2732 2903668 2905179 - general secretion pathway protein E similar to GB:M96172 SP:P37093 GB:L33796 PID:295430 PID:609626%3B identified by sequence similarity gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=VC2732 VC2733 VC2733 VC2733 2905176 2907199 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=VC2733 VC2734 VC2734 VC2734 2907245 2908162 - general secretion pathway protein C similar to SP:P45777 PID:609624%3B identified by sequence similarity gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=VC2734 VC2735 VC2735 VC2735 2908386 2908769 + hypothetical protein gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=VC2735 VC2736 VC2736 hslO hslO 2908788 2909678 + heat shock protein 33 'becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers' gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=VC2736 VC2738 VC2738 VC2738 2910015 2911643 + phosphoenolpyruvate carboxykinase PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=VC2738 VC2739 VC2739 VC2739 2911830 2913716 + hypothetical protein gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=VC2739 VC2740 VC2740 VC2740 2913758 2914690 - hypothetical protein gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=VC2740 VC2741 VC2741 VC2741 2914757 2915191 - D-tyrosyl-tRNA(Tyr) deacylase hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=VC2741 VC2742 VC2742 rbn rbn 2915209 2916102 - ribonuclease BN RNase BN%3B required for 3' maturation of certain phage T4-encoded tRNAs%3B forms a dimer%3B specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence%3B 3' to 5' exoribonuclease gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=VC2742 VC2743 VC2743 VC2743 2916129 2916683 - hypothetical protein gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=VC2743 VC2744 VC2744 VC2744 2916766 2918595 - GTP-binding protein TypA similar to GB:L19201 SP:P32132 PID:304976 GB:U00096 PID:1790302%3B identified by sequence similarity gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=VC2744 VC2745 VC2745 VC2745 2918615 2918938 - hypothetical protein gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=VC2745 VC2746 VC2746 glnA glnA 2919083 2920492 + glutamine synthetase forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=VC2746 VC2747 VC2747 VC2747 2920670 2921260 + hypothetical protein gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=VC2747 VC2748 VC2748 glnL glnL 2921393 2922457 + nitrogen regulation protein NR(II) sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=VC2748 VC2749 VC2749 VC2749 2922461 2923867 + nitrogen regulation protein NR(I) similar to SP:P41789 PID:728724%3B identified by sequence similarity gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=VC2749 VC2750 VC2750 VC2750 2923908 2926457 + GGDEF family protein similar to PID:1653584%3B identified by sequence similarity gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=VC2750 VC2751 VC2751 VC2751 2926549 2927553 + adenosine deaminase catalyzes the formation of inosine from adenosine gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=VC2751 VC2753 VC2753 VC2753 2939167 2939307 - hypothetical protein gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=VC2753 VC2755 VC2755 hemG hemG 2939455 2939979 - protoporphyrinogen oxidase catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=VC2755 VC2756 VC2756 VC2756 2940002 2941459 - potassium uptake protein TrkH similar to SP:P21166%3B identified by sequence similarity gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=VC2756 VC2757 VC2757 VC2757 2941479 2942111 - hypothetical protein gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=VC2757 VC2758 VC2758 fadB fadB 2942322 2944493 + multifunctional fatty acid oxidation complex subunit alpha 'includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids' gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=VC2758 VC2759 VC2759 fadA fadA 2944519 2945682 + 3-ketoacyl-CoA thiolase FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=VC2759 VC2760 VC2760 VC2760 2945749 2946657 - DNA-binding transcriptional regulator similar to SP:P37598 GB:U00096 PID:1742732 PID:1742742 PID:1787949%3B identified by sequence similarity gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=VC2760 VC2761 VC2761 VC2761 2946813 2948015 + inner membrane transport protein YdhC uncharacterized member of the major facilitator superfamily (MFS) gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=VC2761 VC2762 VC2762 glmU glmU 2948077 2949438 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=VC2762 VC2763 VC2763 atpC atpC 2949685 2950107 - ATP synthase F0F1 subunit epsilon part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=VC2763 VC2764 VC2764 VC2764 2950126 2951529 - ATP synthase F0F1 subunit beta Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=VC2764 VC2765 VC2765 VC2765 2951564 2952430 - ATP synthase F0F1 subunit gamma Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=VC2765 VC2766 VC2766 VC2766 2952475 2954046 - ATP synthase F0F1 subunit alpha produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=VC2766 VC2767 VC2767 VC2767 2954030 2954563 - ATP synthase F0F1 subunit delta Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=VC2767 VC2768 VC2768 VC2768 2954578 2955048 - ATP synthase F0F1 subunit B Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=VC2768 VC2769 VC2769 VC2769 2955122 2955379 - ATP synthase F0F1 subunit C Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=VC2769 VC2770 VC2770 VC2770 2955423 2956235 - ATP synthase F0F1 subunit A Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=VC2770 VC2771 VC2771 VC2771 2956244 2956633 - F0F1 ATP synthase subunit I Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=VC2771 VC2772 VC2772 VC2772 2956823 2957704 - ParB family protein similar to SP:P31857 PID:45714%3B identified by sequence similarity gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=VC2772 VC2773 VC2773 VC2773 2957731 2958504 - ParA family protein similar to SP:P31856 PID:45713%3B identified by sequence similarity gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=VC2773 VC2774 VC2774 gidB gidB 2958519 2959151 - 16S rRNA methyltransferase GidB glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=VC2774 VC2775 VC2775 gidA gidA 2959151 2961046 - tRNA uridine 5-carboxymethylaminomethyl modification protein GidA GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=VC2775 VCA0002 VCA0002 VCA0002 1134 3110 + hypothetical protein gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0002 VCA0003 VCA0003 VCA0003 3330 3944 - hypothetical protein gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0003 VCA0004 VCA0004 VCA0004 4154 4351 + hypothetical protein gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0004 VCA0005 VCA0005 VCA0005 4445 4723 + hypothetical protein gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0005 VCA0006 VCA0006 VCA0006 4811 5530 + hypothetical protein gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0006 VCA0007 VCA0007 VCA0007 5645 6520 + 3-hydroxyisobutyrate dehydrogenase similar to GB:AL009126%3B identified by sequence similarity gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0007 VCA0008 VCA0008 VCA0008 6624 8285 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0008 VCA0009 VCA0009 VCA0009 8288 8482 + hypothetical protein gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0009 VCA0010 VCA0010 VCA0010 8563 8919 + hypothetical protein gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0010 VCA0011 VCA0011 VCA0011 8986 11751 - transcriptional regulator MalT Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0011 VCA0013 VCA0013 VCA0013 12271 14724 + maltodextrin phosphorylase similar to SP:P00490 GB:J01647 GB:V00304 GB:X02003 GB:X06791%3B identified by sequence similarity gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0013 VCA0014 VCA0014 malQ malQ 14810 16990 + 4-alpha-glucanotransferase amylomaltase%3B acts to release glucose from maltodextrins gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0014 VCA0015 VCA0015 VCA0015 17196 19386 + gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0015 VCA0017 VCA0017 VCA0017 19781 20299 + hcp protein similar to GP:1488371%3B identified by sequence similarity gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0017 VCA0018 VCA0018 VCA0018 20427 22511 + VgrG protein similar to GP:2920640%3B identified by sequence similarity gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0018 VCA0019 VCA0019 VCA0019 22511 23398 + hypothetical protein gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0019 VCA0020 VCA0020 VCA0020 23395 26652 + hypothetical protein gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0020 VCA0021 VCA0021 VCA0021 26653 27381 + hypothetical protein gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0021 VCA0022 VCA0022 VCA0022 27484 27885 + glutathione S-transferase similar to GB:U77604 PID:1747521%3B identified by sequence similarity gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0022 VCA0023 VCA0023 VCA0023 28058 29098 - hypothetical protein gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0023 VCA0024 VCA0024 VCA0024 29214 30206 - hypothetical protein gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0024 VCA0025 VCA0025 VCA0025 30484 31872 + NadC family protein similar to GB:L42023 PID:1005433 PID:1220685 PID:1204859 SP:Q57486%3B identified by sequence similarity gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0025 VCA0026 VCA0026 VCA0026 31968 32603 - hypothetical protein gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0026 VCA0027 VCA0027 VCA0027 33035 35584 + chitinase similar to SP:P32823 PID:216207%3B identified by sequence similarity gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0027 VCA0028 VCA0028 VCA0028 35606 35860 - hypothetical protein gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0028 VCA0029 VCA0029 VCA0029 35950 36684 + transcriptional regulator similar to GB:AL123456%3B identified by sequence similarity gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0029 VCA0030 VCA0030 VCA0030 36685 37527 + hypothetical protein gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0030 VCA0031 VCA0031 VCA0031 37648 39213 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0031 VCA0032 VCA0032 VCA0032 39311 39871 - hypothetical protein gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0032 VCA0033 VCA0033 VCA0033 40280 42154 + hypothetical protein gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0033 VCA0034 VCA0034 VCA0034 42214 43086 - hypothetical protein gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0034 VCA0035 VCA0035 VCA0035 43274 44026 + phosphatidylglycerophosphatase B similar to GB:M23628 SP:P18201 PID:450384 GB:U00096 PID:1742092%3B identified by sequence similarity gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0035 VCA0036 VCA0036 VCA0036 44080 45297 - serine/threonine transporter SstT involved in the import of serine and threonine coupled with the import of sodium gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0036 VCA0037 VCA0037 VCA0037 45638 46090 - hypothetical protein gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0037 VCA0038 VCA0038 VCA0038 46104 46685 - Sco1-like protein similar to SP:P38072 PID:498753 PID:536232%3B identified by sequence similarity gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0038 VCA0039 VCA0039 VCA0039 46682 47104 - hypothetical protein gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0039 VCA0040 VCA0040 VCA0040 47303 48229 - hypothetical protein gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0040 VCA0041 VCA0041 VCA0041 48768 49994 + sodium/glutamate symporter similar to GB:L42023 SP:P45240 PID:1007715 PID:1221675 PID:1205765%3B identified by sequence similarity gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0041 VCA0042 VCA0042 VCA0042 50073 50831 - hypothetical protein gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0042 VCA0043 VCA0043 VCA0043 50963 51247 + hypothetical protein gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0043 VCA0044 VCA0044 VCA0044 51480 54154 + gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0044 VCA0047 VCA0047 VCA0047 54930 56060 - hypothetical protein gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0047 VCA0048 VCA0048 VCA0048 56060 56449 - hypothetical protein gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0048 VCA0049 VCA0049 VCA0049 56584 58163 - gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0049 VCA0051 VCA0051 VCA0051 58144 59667 - hypothetical protein gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0051 VCA0052 VCA0052 VCA0052 59786 61255 - hypothetical protein gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0052 VCA0053 VCA0053 VCA0053 61320 62030 - purine nucleoside phosphorylase catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0053 VCA0055 VCA0055 VCA0055 62337 63305 + hypothetical protein gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0055 VCA0056 VCA0056 VCA0056 63295 64092 + MerR family transcriptional regulator similar to SP:P33358 PID:405858 GB:U00096 PID:1788448%3B identified by sequence similarity gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0056 VCA0057 VCA0057 VCA0057 64102 65511 + deoxyribodipyrimidine photolyase similar to GB:K01299 SP:P00914 PID:147268 GB:U00096 PID:1651311%3B identified by sequence similarity gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0057 VCA0058 VCA0058 VCA0058 65520 66440 + hypothetical protein gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0058 VCA0059 VCA0059 VCA0059 66526 66774 - major outer membrane lipoprotein similar to GB:M13176 SP:P09461 GB:M28554 PID:150894 PID:150896%3B identified by sequence similarity gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0059 VCA0061 VCA0061 VCA0061 67304 68662 + DEAD/DEAH box helicase similar to GB:L02123 SP:P25888 PID:560801 GB:U00096 PID:1651360%3B identified by sequence similarity gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0061 VCA0063 VCA0063 VCA0063 68875 70872 + protease II similar to GB:D10976 SP:P24555 PID:216624 GB:U00096 PID:1736485%3B identified by sequence similarity gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0063 VCA0064 VCA0064 VCA0064 70872 73013 + TonB system receptor similar to GB:L27149 PID:529727%3B identified by sequence similarity gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0064 VCA0065 VCA0065 VCA0065 73023 75329 + hypothetical protein gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0065 VCA0066 VCA0066 VCA0066 75326 76768 + hypothetical protein gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0066 VCA0067 VCA0067 VCA0067 76765 77325 + hypothetical protein gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0067 VCA0068 VCA0068 VCA0068 77459 79102 - methyl-accepting chemotaxis protein similar to SP:P15492 GB:X16945 PID:48362 PID:2190531%3B identified by sequence similarity gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0068 VCA0070 VCA0070 VCA0070 79473 80294 + phosphate ABC transporter substrate-binding protein similar to GB:AE000666%3B identified by sequence similarity gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0070 VCA0071 VCA0071 VCA0071 80372 81292 + phosphate ABC transporter permease similar to GB:AE000666%3B identified by sequence similarity gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0071 VCA0072 VCA0072 VCA0072 81292 82161 + phosphate ABC transporter permease similar to GB:AE000783%3B identified by sequence similarity gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0072 VCA0073 VCA0073 VCA0073 82190 82945 + phosphate ABC transporter ATP-binding protein ATP-binding protein%3B PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0073 VCA0074 VCA0074 VCA0074 82992 84092 - diguanylate cyclase similar to GP:1800009%3B identified by sequence similarity gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0074 VCA0075 VCA0075 VCA0075 84089 84556 - hypothetical protein gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0075 VCA0076 VCA0076 VCA0076 84847 86223 - hypothetical protein gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0076 VCA0077 VCA0077 VCA0077 86658 88319 - sulfate permease similar to GB:AL009126%3B identified by sequence similarity gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0077 VCA0078 VCA0078 VCA0078 88624 88956 + hypothetical protein gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0078 VCA0079 VCA0079 VCA0079 89148 90440 + hypothetical protein gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0079 VCA0080 VCA0080 VCA0080 90558 92381 - diguanylate cyclase similar to GP:6759486%3B identified by sequence similarity gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0080 VCA0082 VCA0082 VCA0082 92604 93491 - LysR family transcriptional regulator similar to PID:1652750%3B identified by sequence similarity gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0082 VCA0083 VCA0083 VCA0083 93581 94792 + multidrug resistance protein D similar to GB:X78969 PID:474915%3B identified by sequence similarity gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0083 VCA0084 VCA0084 VCA0084 94834 95280 - DNA-binding transcriptional dual regulator SoxR similar to GB:U00096 PID:1790498%3B identified by sequence similarity gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0084 VCA0085 VCA0085 VCA0085 95459 96661 + hypothetical protein gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0085 VCA0086 VCA0086 VCA0086 96762 97142 + hypothetical protein gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0086 VCA0087 VCA0087 VCA0087 97216 97380 + hypothetical protein gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0087 VCA0088 VCA0088 VCA0088 97546 98820 - proton/glutamate symporter similar to SP:P21345 GB:M32488 GB:M84805 PID:147160 PID:396412%3B identified by sequence similarity gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0088 VCA0090 VCA0090 VCA0090 99076 99969 - hypothetical protein gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0090 VCA0091 VCA0091 VCA0091 100199 100495 + hypothetical protein gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0091 VCA0092 VCA0092 VCA0092 100666 101295 - hypothetical protein gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0092 VCA0094 VCA0094 VCA0094 101796 102152 + hypothetical protein gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0094 VCA0095 VCA0095 VCA0095 102421 103119 + hypothetical protein gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0095 VCA0096 VCA0096 VCA0096 103162 104385 + hypothetical protein gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0096 VCA0097 VCA0097 VCA0097 104398 105114 - hypothetical protein gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0097 VCA0098 VCA0098 VCA0098 105513 106820 + nicotinate phosphoribosyltransferase catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0098 VCA0099 VCA0099 VCA0099 106851 107891 + Gfo/Idh/MocA family oxidoreductase similar to GB:U00096 PID:1742678 PID:1742686 PID:1742694 PID:1742718%3B identified by sequence similarity gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0099 VCA0100 VCA0100 VCA0100 107928 108299 - phage shock protein E similar to GP:7226016%3B identified by sequence similarity gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0100 VCA0101 VCA0101 VCA0101 108299 109855 - hypothetical protein gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0101 VCA0102 VCA0102 VCA0102 110031 110690 - CbbY family protein similar to GB:U00096 PID:1789046%3B identified by sequence similarity gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0102 VCA0103 VCA0103 VCA0103 110871 112649 + sulfate permease similar to GB:AL123456%3B identified by sequence similarity gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0103 VCA0104 VCA0104 VCA0104 112691 114370 - ribosomal large subunit pseudouridine synthase A similar to SP:P39219 GB:U00096 PID:1786244%3B identified by sequence similarity gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0104 VCA0105 VCA0105 VCA0105 115142 115426 + hypothetical protein gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0105 VCA0106 VCA0106 VCA0106 115410 116414 + hypothetical protein gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0106 VCA0107 VCA0107 VCA0107 116846 117352 + hypothetical protein gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0107 VCA0108 VCA0108 VCA0108 117393 118871 + hypothetical protein gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0108 VCA0109 VCA0109 VCA0109 118874 119311 + hypothetical protein gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0109 VCA0110 VCA0110 VCA0110 119317 121086 + hypothetical protein gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0110 VCA0111 VCA0111 VCA0111 121050 122066 + hypothetical protein gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0111 VCA0112 VCA0112 VCA0112 122069 123556 + hypothetical protein gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0112 VCA0113 VCA0113 VCA0113 123559 124035 + hypothetical protein gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0113 VCA0114 VCA0114 VCA0114 124042 125376 + hypothetical protein gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0114 VCA0115 VCA0115 VCA0115 125379 126152 + hypothetical protein gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0115 VCA0116 VCA0116 VCA0116 126178 128787 + clpB protein similar to GB:M29364 SP:P03815 GB:V00350 GB:X57620 PID:1236633%3B identified by sequence similarity gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0116 VCA0117 VCA0117 VCA0117 128790 130382 + sigma-54 dependent transcriptional regulator similar to GB:M64988 SP:P25852 PID:154142%3B identified by sequence similarity gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0117 VCA0118 VCA0118 VCA0118 130352 131035 + hypothetical protein gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0118 VCA0119 VCA0119 VCA0119 131045 132454 + hypothetical protein gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0119 VCA0120 VCA0120 VCA0120 132470 136015 + IcmF-like protein similar to GP:2897626%3B identified by sequence similarity gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0120 VCA0121 VCA0121 VCA0121 136063 137328 + hypothetical protein gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0121 VCA0122 VCA0122 VCA0122 137379 137621 + hypothetical protein gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0122 VCA0123 VCA0123 VCA0123 137581 140634 + VgrG protein similar to GP:2920640%3B identified by sequence similarity gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0123 VCA0124 VCA0124 VCA0124 140631 140999 + hypothetical protein gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0124 VCA0125 VCA0125 VCA0125 141147 141407 - hypothetical protein gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0125 VCA0127 VCA0127 VCA0127 141691 142110 + D-ribose pyranase cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0127 VCA0128 VCA0128 VCA0128 142137 143639 + D-ribose transporter ATP-binding protein with RbsBCD acts to import ribose into the cell%3B RbsA contains 2 ATP-binding domain gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0128 VCA0129 VCA0129 rbsC rbsC 143636 144634 + ribose ABC transporter permease functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0129 VCA0130 VCA0130 VCA0130 144693 145577 + D-ribose transporter subunit RbsB periplasmic substrate-binding component of the ATP-dependent ribose transport system gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0130 VCA0131 VCA0131 VCA0131 145716 146636 + ribokinase catalyzes the formation of D-ribose 5-phosphate from ribose gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0131 VCA0132 VCA0132 VCA0132 146647 147651 + ribose operon repressor similar to GB:L10328 SP:P25551 GB:D10466 GB:M13169 PID:147517%3B identified by sequence similarity gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0132 VCA0133 VCA0133 VCA0133 147777 148511 + 'This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact.' gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0133 VCA0134 VCA0134 VCA0134 148508 149239 + uridine phosphorylase similar to GB:L42023 SP:P43770 PID:1003456 PID:1222205 PID:1204536%3B identified by sequence similarity gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0134 VCA0135 VCA0135 VCA0135 149379 150059 + cyclic nucleotide binding protein similar to GB:AE000520%3B identified by sequence similarity gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0135 VCA0136 VCA0136 glpQ glpQ 150112 151179 - glycerophosphodiester phosphodiesterase hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0136 VCA0137 VCA0137 glpT glpT 151333 152691 - sn-glycerol-3-phosphate transporter catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0137 VCA0139 VCA0139 VCA0139 153117 153464 - hypothetical protein gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0139 VCA0140 VCA0140 VCA0140 153872 155080 + spindolin-like protein similar to PID:1145625%3B identified by sequence similarity gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0140 VCA0141 VCA0141 VCA0141 155195 157249 - C4-dicarboxylate transport sensor protein similar to SP:P10047 GB:X06253 GB:Z11529 PID:46179 PID:46182%3B identified by sequence similarity gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0141 VCA0142 VCA0142 VCA0142 157539 158891 + C4-dicarboxylate transport transcriptional regulator similar to SP:P10046 GB:X06253 GB:Z11529 PID:46180 PID:46183%3B identified by sequence similarity gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0142 VCA0143 VCA0143 VCA0143 158957 159067 + hypothetical protein gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0143 VCA0144 VCA0144 VCA0144 159145 160200 + hypothetical protein similar to SP:P12920 PID:144105%3B identified by sequence similarity gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0144 VCA0146 VCA0146 VCA0146 160350 162515 + hypothetical protein gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0146 VCA0147 VCA0147 VCA0147 162512 163723 + hydroxyglutarate oxidase catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0147 VCA0148 VCA0148 VCA0148 164096 167839 + TagA-like protein similar to GB:U12265 SP:P24019 PID:516033%3B identified by sequence similarity gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0148 VCA0150 VCA0150 def def 167987 168493 + peptide deformylase cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+) gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0150 VCA0151 VCA0151 VCA0151 168622 169974 + oxidoreductase similar to GB:D16629 PID:391842%3B identified by sequence similarity gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0151 VCA0152 VCA0152 VCA0152 170049 170372 - monovalent cation/H+ antiporter subunit G 'subunit G of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B in S. meliloti it is known to be involved specifically with K+ transport' gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0152 VCA0153 VCA0153 VCA0153 170372 170683 - monovalent cation/H+ antiporter subunit F 'subunit F of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali%3B in S. meliloti it is known to be involved specifically with K+ transport' gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0153 VCA0154 VCA0154 VCA0154 170643 171119 - hypothetical protein gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0154 VCA0155 VCA0155 VCA0155 171116 172612 - NADH dehydrogenase similar to GP:1934776%3B identified by sequence similarity gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0155 VCA0156 VCA0156 VCA0156 172609 172962 - monovalent cation/H+ antiporter subunit C 'subunit C of antiporter complex involved in resistance to high concentrations of Na+%2C K+%2C Li+ and/or alkali' gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0156 VCA0157 VCA0157 VCA0157 172962 175637 - NADH dehydrogenase similar to GB:AL009126%3B identified by sequence similarity gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0157 VCA0158 VCA0158 VCA0158 175784 175984 - hypothetical protein gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0158 VCA0159 VCA0159 VCA0159 176056 176997 - hypothetical protein gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0159 VCA0160 VCA0160 VCA0160 177193 178428 - tryptophan-specific transport protein similar to GB:L42023 SP:P44614 PID:1003469 PID:1222213 PID:1204542%3B identified by sequence similarity gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0160 VCA0161 VCA0161 tnaA tnaA 178507 179925 - tryptophanase tryptophan indole-lyase%3B catalyzes the formation of indole and pyruvate from tryptophan gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0161 VCA0163 VCA0163 VCA0163 180706 180918 + hypothetical protein gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0163 VCA0164 VCA0164 VCA0164 180988 181470 - hypothetical protein gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0164 VCA0165 VCA0165 VCA0165 181879 184011 + diguanylate cyclase similar to PID:1653866%3B identified by sequence similarity gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0165 VCA0166 VCA0166 VCA0166 184257 184469 + cold shock transcriptional regulator CspA similar to GB:L23115 SP:P37410 GB:X52093 PID:349561%3B identified by sequence similarity gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0166 VCA0167 VCA0167 VCA0167 184758 185474 - hypothetical protein gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0167 VCA0168 VCA0168 VCA0168 185635 187290 - gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0168 VCA0171 VCA0171 VCA0171 187284 189224 - hypothetical protein gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0171 VCA0172 VCA0172 VCA0172 189226 190182 - hypothetical protein gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0172 VCA0173 VCA0173 VCA0173 190169 190657 - hypothetical protein gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0173 VCA0174 VCA0174 VCA0174 190654 191589 - hypothetical protein gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0174 VCA0175 VCA0175 VCA0175 191593 192549 - MoxR-like protein similar to GB:AE000783%3B identified by sequence similarity gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0175 VCA0176 VCA0176 VCA0176 192834 194768 + methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0176 VCA0177 VCA0177 VCA0177 194825 195028 + hypothetical protein gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0177 VCA0178 VCA0178 VCA0178 195304 195957 - FrnE protein similar to GP:3170570%3B identified by sequence similarity gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0178 VCA0179 VCA0179 VCA0179 196603 197811 + NupC family protein similar to GB:L42023 SP:P44742 PID:1003922 PID:1222453 PID:1204770%3B identified by sequence similarity gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0179 VCA0180 VCA0180 VCA0180 198062 199294 + peptidase T catalyzes the release of the N-terminal amino acid from a tripeptide gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0180 VCA0181 VCA0181 VCA0181 199466 200341 + hypothetical protein gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0181 VCA0182 VCA0182 VCA0182 200338 201930 - anaerobic nitric oxide reductase transcriptional regulator Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0182 VCA0183 VCA0183 VCA0183 202121 203305 + nitric oxide dioxygenase flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0183 VCA0184 VCA0184 VCA0184 203449 203658 - cold shock DNA-binding domain-containing protein similar to PID:1513081%3B identified by sequence similarity gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0184 VCA0185 VCA0185 VCA0185 204017 204244 + hypothetical protein gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0185 VCA0186 VCA0186 VCA0186 204632 205009 + hypothetical protein gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0186 VCA0188 VCA0188 VCA0188 205244 205522 + hypothetical protein gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0188 VCA0189 VCA0189 VCA0189 205609 206613 + response regulator similar to PID:1736859 PID:1736868%3B identified by sequence similarity gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0189 VCA0190 VCA0190 VCA0190 206613 207059 + hypothetical protein gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0190 VCA0191 VCA0191 VCA0191 207097 208581 + hypothetical protein gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0191 VCA0192 VCA0192 VCA0192 208570 209565 - D-lactate dehydrogenase 'Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate%2C alpha-ketoglutarate%2C and to a much lower extent%2C KHTCA%2C but not pyruvate. Involved in the biosynthes' gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0192 VCA0193 VCA0193 VCA0193 209748 211091 + Na+/H+ antiporter similar to GB:AE000783%3B identified by sequence similarity gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0193 VCA0194 VCA0194 VCA0194 211093 211935 - potassium channel protein similar to PID:1089906%3B identified by sequence similarity gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0194 VCA0195 VCA0195 VCA0195 212001 212549 - hypothetical protein gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0195 VCA0197 VCA0197 VCA0197 213207 214250 + guanosine 5'-monophosphate oxidoreductase catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0197 VCA0198 VCA0198 VCA0198 214574 215725 + site-specific DNA-methyltransferase similar to SP:P34906%3B identified by sequence similarity gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0198 VCA0199 VCA0199 VCA0199 215849 217765 + hypothetical protein gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0199 VCA0200 VCA0200 VCA0200 217758 218882 + hypothetical protein gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0200 VCA0201 VCA0201 VCA0201 218879 219757 + hypothetical protein gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0201 VCA0202 VCA0202 VCA0202 219825 220262 - IS1004 transposase similar to PID:1054866 PID:2271024%3B identified by sequence similarity gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0202 VCA0203 VCA0203 VCA0203 220175 220419 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0203 VCA0204 VCA0204 VCA0204 220767 222122 - ATP-dependent RNA helicase RhlE similar to GB:L02123 SP:P25888 PID:560801 GB:U00096 PID:1651360%3B identified by sequence similarity gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0204 VCA0205 VCA0205 VCA0205 222312 223640 - anaerobic C4-dicarboxylate transporter 'functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters' gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0205 VCA0207 VCA0207 nadE nadE 223891 224721 - NAD synthetase catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0207 VCA0208 VCA0208 VCA0208 224824 225351 + nicotinic acid mononucleotide adenylyltransferase catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0208 VCA0209 VCA0209 VCA0209 225302 225484 + hypothetical protein gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0209 VCA0210 VCA0210 VCA0210 225591 227159 + response regulator similar to PID:558266%3B identified by sequence similarity gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0210 VCA0211 VCA0211 VCA0211 227217 229163 - sensory box sensor histidine kinase similar to PID:561864%3B identified by sequence similarity gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0211 VCA0212 VCA0212 VCA0212 229338 230387 + hypothetical protein gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0212 VCA0213 VCA0213 VCA0213 230465 232054 - hypothetical protein gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0213 VCA0214 VCA0214 emrD emrD 232449 233693 - multidrug resistance protein D multidrug efflux protein involved in adaptation to low energy shock gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0214 VCA0216 VCA0216 VCA0216 233907 234173 + hypothetical protein gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0216 VCA0217 VCA0217 VCA0217 234164 235243 - diguanylate cyclase similar to GB:AE000657%3B identified by sequence similarity gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0217 VCA0218 VCA0218 VCA0218 235364 236620 - thermolabile hemolysin similar to GB:M36437 SP:Q99289 PID:155178%3B identified by sequence similarity gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0218 VCA0219 VCA0219 VCA0219 237590 239815 + hemolysin similar to GP:587586%3B identified by sequence similarity gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0219 VCA0220 VCA0220 VCA0220 240114 241760 + hemolysin secretion protein HylB similar to SP:P15492 GB:X16945 PID:48362 PID:2190531%3B identified by sequence similarity gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0220 VCA0221 VCA0221 VCA0221 242108 243046 + lactonizing lipase similar to PID:2193963%3B identified by sequence similarity gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0221 VCA0222 VCA0222 VCA0222 243056 243910 + lipase chaperone acts as a molecular chaperone to fold and export lipase A gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0222 VCA0223 VCA0223 VCA0223 243986 246742 - protease similar to PID:2193965%3B identified by sequence similarity gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0223 VCA0224 VCA0224 VCA0224 246827 247132 - hypothetical protein gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0224 VCA0225 VCA0225 VCA0225 247686 248450 + hypothetical protein gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0225 VCA0227 VCA0227 VCA0227 248766 249767 + iron(III) ABC transporter substrate-binding protein similar to GB:AL009126%3B identified by sequence similarity gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0227 VCA0228 VCA0228 VCA0228 249820 250758 + iron(III) ABC transporter permease similar to GB:AL009126%3B identified by sequence similarity gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0228 VCA0229 VCA0229 VCA0229 250748 251698 + iron(III) ABC transporter permease similar to GB:AL009126%3B identified by sequence similarity gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0229 VCA0230 VCA0230 VCA0230 251701 252465 + iron(III) ABC transporter ATP-binding protein similar to GB:AL009126%3B identified by sequence similarity gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0230 VCA0231 VCA0231 VCA0231 252511 253587 - AraC family transcriptional regulator similar to SP:P27029 GB:X57299 PID:47906%3B identified by sequence similarity gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0231 VCA0232 VCA0232 VCA0232 253614 255592 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0232 VCA0233 VCA0233 VCA0233 255650 255970 + hypothetical protein gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0233 VCA0235 VCA0235 VCA0235 256240 257433 + acetate kinase AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0235 VCA0236 VCA0236 VCA0236 257514 257810 + hypothetical protein gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0236 VCA0237 VCA0237 VCA0237 257928 258497 - hypothetical protein gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0237 VCA0238 VCA0238 VCA0238 258742 260391 + sensor histidine kinase similar to PID:1064813 GB:AL009126%3B identified by sequence similarity gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0238 VCA0239 VCA0239 VCA0239 260372 261046 + transcriptional regulator similar to SP:Q44006%3B identified by sequence similarity gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0239 VCA0240 VCA0240 VCA0240 261049 261678 - hypothetical protein gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0240 VCA0241 VCA0241 VCA0241 261638 262522 - L-xylulose 5-phosphate 3-epimerase 'L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated%3B may be involved in the utilization of 2%2C3-diketo-L-gulonate' gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0241 VCA0242 VCA0242 ulaD ulaD 262534 263181 - 3-keto-L-gulonate-6-phosphate decarboxylase catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0242 VCA0243 VCA0243 VCA0243 263187 264008 - hypothetical protein gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0243 VCA0244 VCA0244 araD araD 264014 264706 - L-ribulose-5-phosphate 4-epimerase catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0244 VCA0245 VCA0245 VCA0245 264715 265221 - PTS system transporter subunit IIA similar to GB:U14003 SP:P39303 PID:537036 GB:U00096 PID:2367359%3B identified by sequence similarity gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0245 VCA0246 VCA0246 ulaA ulaA 265319 267079 - PTS system ascorbate-specific transporter subunits IICB membrane component%3B functions with enzymes IIB (sgaB%3B ulaB) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0246 VCA0247 VCA0247 VCA0247 267445 268200 + transcriptional repressor UlaR negative regulator of ulaG and ulaABCDEF gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0247 VCA0248 VCA0248 VCA0248 268327 269394 + L-ascorbate 6-phosphate lactonase gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0248 VCA0249 VCA0249 VCA0249 269494 270027 - cytochrome b561 similar to SP:P08732 GB:X07569 PID:41191 GB:U00096 PID:1787687%3B identified by sequence similarity gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0249 VCA0250 VCA0250 VCA0250 270200 271600 - alpha-amylase similar to PID:1177849%3B identified by sequence similarity gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0250 VCA0253 VCA0253 VCA0253 271933 272631 + antibiotic acetyltransferase similar to SP:P26838 GB:M80188 PID:150399%3B identified by sequence similarity gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0253 VCA0254 VCA0254 VCA0254 273253 275421 - hypothetical protein gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0254 VCA0255 VCA0255 VCA0255 275510 276340 - hypothetical protein gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0255 VCA0256 VCA0256 VCA0256 276337 277008 - transcriptional regulator similar to GB:M31794 SP:P45605 PID:149295%3B identified by sequence similarity gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0256 VCA0257 VCA0257 VCA0257 276984 278438 - sensor histidine kinase similar to PID:1001492 PID:1001594%3B identified by sequence similarity gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0257 VCA0258 VCA0258 VCA0258 278541 279053 - hypothetical protein gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0258 VCA0260 VCA0260 VCA0260 279248 279756 - gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0260 VCA0262 VCA0262 VCA0262 279866 280276 - hypothetical protein gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0262 VCA0263 VCA0263 VCA0263 280382 280924 - acetyltransferase similar to SP:P45473 PID:606096 GB:U00096 PID:1789546%3B identified by sequence similarity gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0263 VCA0264 VCA0264 VCA0264 280935 282113 - transcriptional regulator similar to PID:1651704%3B identified by sequence similarity gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0264 VCA0265 VCA0265 VCA0265 282297 282677 + hypothetical protein gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0265 VCA0266 VCA0266 VCA0266 282737 283510 - AraC family transcriptional regulator similar to GB:U00096 PID:1788091%3B identified by sequence similarity gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0266 VCA0267 VCA0267 VCA0267 283612 284751 + multidrug resistance protein D similar to GB:X78969 PID:474915%3B identified by sequence similarity gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0267 VCA0268 VCA0268 VCA0268 285034 286965 + methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0268 VCA0269 VCA0269 VCA0269 286981 288654 + decarboxylase%2C group II similar to GB:L42023 PID:1161418 PID:1221055 PID:1205195 PID:1573971%3B identified by sequence similarity gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0269 VCA0270 VCA0270 VCA0270 288819 289988 + D-alanyl-D-alanine carboxypeptidase similar to GB:L42023 SP:P44466 PID:1004158 PID:1221933 PID:1204287%3B identified by sequence similarity gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0270 VCA0271 VCA0271 VCA0271 290166 290513 + hypothetical protein gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0271 VCA0274 VCA0274 VCA0274 291259 291978 + carbonic anhydrase similar to GP:2773324%3B identified by sequence similarity gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0274 VCA0274a VCA0274a VCA0274a 290608 291042 - hypothetical protein gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0274a VCA0275 VCA0275 VCA0275 292265 292702 - IS1004 transposase similar to PID:1054866 PID:2271024%3B identified by sequence similarity gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0275 VCA0276 VCA0276 VCA0276 292882 295745 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0276 VCA0277 VCA0277 VCA0277 295889 296269 - glycine cleavage system protein H 'part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor' gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0277 VCA0278 VCA0278 VCA0278 296306 297613 - serine hydroxymethyltransferase 'catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate' gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0278 VCA0279 VCA0279 VCA0279 298001 298624 + transcriptional regulator similar to GB:AE000666%3B identified by sequence similarity gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0279 VCA0280 VCA0280 VCA0280 298868 300000 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0280 VCA0281 VCA0281 VCA0281 300467 301624 + integrase similar to GP:3294478%3B identified by sequence similarity gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0281 VCA0282 VCA0282 VCA0282 301670 302650 + IS5 transposase similar to GB:J01735%3B identified by sequence similarity gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0282 VCA0283 VCA0283 VCA0283 302926 304149 + hypothetical protein gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0283 VCA0284 VCA0284 VCA0284 304670 305200 + hypothetical protein gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0284 VCA0285 VCA0285 VCA0285 305200 305871 + hypothetical protein gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0285 VCA0286 VCA0286 VCA0286 305873 306223 + hypothetical protein gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0286 VCA0287 VCA0287 VCA0287 306492 308420 + threonyl-tRNA synthetase 'catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)%3B catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA' gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0287 VCA0288 VCA0288 infC infC 308586 308975 + initiation factor IF3 gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0288 VCA0289 VCA0289 rpmI rpmI 309079 309273 + 50S ribosomal protein L35 similar to GP:3095163%3B identified by sequence similarity gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0289 VCA0290 VCA0290 rplT rplT 309315 309668 + 50S ribosomal protein L20 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0290 VCA0291 VCA0291 VCA0291 309750 310712 - site-specific recombinase IntI4 similar to GP:3095165%3B identified by sequence similarity gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0291 VCA0292 VCA0292 VCA0292 311034 311300 + hypothetical protein gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0292 VCA0293 VCA0293 VCA0293 311455 312054 + hypothetical protein gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0293 VCA0294 VCA0294 VCA0294 312716 313090 + hypothetical protein gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0294 VCA0297 VCA0297 VCA0297 313887 314069 + hypothetical protein gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0297 VCA0298 VCA0298 VCA0298 314325 314576 + hypothetical protein gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0298 VCA0299 VCA0299 VCA0299 314717 315160 + hypothetical protein gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0299 VCA0300 VCA0300 VCA0300 315311 315940 + chloramphenicol acetyltransferase similar to SP:P26838 GB:M80188 PID:150399%3B identified by sequence similarity gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0300 VCA0301 VCA0301 VCA0301 316096 316848 + short chain dehydrogenase/reductase oxidoreductase similar to PID:887852 GB:U00096 PID:1773222 PID:2160242 PID:2367175%3B identified by sequence similarity gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0301 VCA0302 VCA0302 VCA0302 317150 317332 + hypothetical protein gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0302 VCA0303 VCA0303 VCA0303 317510 317914 + hypothetical protein gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0303 VCA0304 VCA0304 VCA0304 318210 318392 + hypothetical protein gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0304 VCA0306 VCA0306 VCA0306 318746 318928 + hypothetical protein gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0306 VCA0307 VCA0307 VCA0307 319123 319800 + hypothetical protein gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0307 VCA0308 VCA0308 VCA0308 319962 321170 + deoxyguanosinetriphosphate triphosphohydrolase-like protein similar to PID:1150772%3B identified by sequence similarity gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0308 VCA0309 VCA0309 VCA0309 321332 322036 + hypothetical protein gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0309 VCA0310 VCA0310 VCA0310 322167 322532 + hypothetical protein gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0310 VCA0311 VCA0311 VCA0311 322686 323021 - hypothetical protein gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0311 VCA0312 VCA0312 VCA0312 323022 323264 - hypothetical protein gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0312 VCA0313 VCA0313 VCA0313 323508 323894 + MutT/nudix family protein similar to GB:AE000666%3B identified by sequence similarity gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0313 VCA0314 VCA0314 VCA0314 324013 324294 + hypothetical protein gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0314 VCA0315 VCA0315 VCA0315 324270 324428 - hypothetical protein gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0315 VCA0316 VCA0316 VCA0316 324552 325088 + acetyltransferase similar to SP:P05332 GB:X07542 PID:39573%3B identified by sequence similarity gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0316 VCA0317 VCA0317 VCA0317 325225 325740 + lipoprotein Blc similar to GP:2565357%3B identified by sequence similarity gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0317 VCA0318 VCA0318 VCA0318 325890 326387 - hypothetical protein gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0318 VCA0319 VCA0319 VCA0319 326384 326656 - hypothetical protein gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0319 VCA0322 VCA0322 VCA0322 327418 327870 + hypothetical protein gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0322 VCA0323 VCA0323 VCA0323 328018 328314 - hypothetical protein gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0323 VCA0324 VCA0324 VCA0324 328280 328558 - DNA-damage-inducible protein J similar to PID:984582 GB:U00096 SP:Q47150 PID:1786420%3B identified by sequence similarity gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0324 VCA0325 VCA0325 VCA0325 328799 329122 + hypothetical protein gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0325 VCA0328 VCA0328 VCA0328 329859 330257 + biphenyl-2%2C3-diol 1%2C2-dioxygenase similar to GB:X75635 SP:P47233 PID:473121%3B identified by sequence similarity gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0328 VCA0329 VCA0329 VCA0329 330452 330703 + hypothetical protein gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0329 VCA0329a VCA0329a VCA0329a 330806 331159 + hypothetical protein gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0329a VCA0329b VCA0329b VCA0329b 331366 331689 + hypothetical protein gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0329b VCA0330 VCA0330 VCA0330 332490 332978 + hypothetical protein gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0330 VCA0331 VCA0331 VCA0331 333106 333768 + hypothetical protein gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0331 VCA0332 VCA0332 VCA0332 333953 334219 + hypothetical protein gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0332 VCA0333 VCA0333 VCA0333 334206 334451 + hypothetical protein gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0333 VCA0334 VCA0334 VCA0334 334535 335341 + hypothetical protein gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0334 VCA0336 VCA0336 VCA0336 335633 335815 + hypothetical protein gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0336 VCA0337 VCA0337 VCA0337 336031 337035 + microcin immunity protein MccF similar to GP:2565352%3B identified by sequence similarity gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0337 VCA0338 VCA0338 VCA0338 337188 337547 + hypothetical protein gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0338 VCA0339 VCA0339 VCA0339 337820 338053 + hypothetical protein gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0339 VCA0340 VCA0340 VCA0340 338321 338827 + hypothetical protein gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0340 VCA0341 VCA0341 VCA0341 338972 339370 + biphenyl-2%2C3-diol 1%2C2-dioxygenase similar to GB:X75635 SP:P47233 PID:473121%3B identified by sequence similarity gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0341 VCA0342 VCA0342 VCA0342 339528 339830 + hypothetical protein gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0342 VCA0343 VCA0343 VCA0343 340025 340276 + hypothetical protein gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0343 VCA0344 VCA0344 VCA0344 340545 340970 + hypothetical protein gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0344 VCA0345 VCA0345 VCA0345 341170 341799 + hypothetical protein gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0345 VCA0346 VCA0346 VCA0346 342012 342491 + H-REV 107-like protein similar to SP:P53817 PID:433963%3B identified by sequence similarity gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0346 VCA0347 VCA0347 VCA0347 342679 343092 + hypothetical protein gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0347 VCA0348 VCA0348 VCA0348 343243 343521 - hypothetical protein gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0348 VCA0349 VCA0349 VCA0349 343518 343802 - RelB protein similar to SP:P07007 GB:X02405 PID:42700 GB:U00096 PID:1742559%3B identified by sequence similarity gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0349 VCA0350 VCA0350 VCA0350 343997 344512 + lipoprotein Blc similar to GP:2565360%3B identified by sequence similarity gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0350 VCA0351 VCA0351 VCA0351 344577 345173 + hypothetical protein gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0351 VCA0353 VCA0353 VCA0353 345564 345746 + hypothetical protein gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0353 VCA0354 VCA0354 VCA0354 345946 346419 + hypothetical protein gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0354 VCA0355 VCA0355 VCA0355 346568 347194 + hypothetical protein gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0355 VCA0356 VCA0356 VCA0356 347308 348015 + hypothetical protein gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0356 VCA0356a VCA0356a VCA0356a 348195 348356 + hypothetical protein gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0356a VCA0357 VCA0357 VCA0357 348713 348892 + hypothetical protein gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0357 VCA0358 VCA0358 VCA0358 349076 349501 + hypothetical protein gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0358 VCA0359 VCA0359 VCA0359 349629 349928 - plasmid stabilization element ParE similar to GB:AL123456%3B identified by sequence similarity gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0359 VCA0361 VCA0361 VCA0361 350396 350974 + hypothetical protein gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0361 VCA0361a VCA0361a VCA0361a 351148 351309 + hypothetical protein gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0361a VCA0362 VCA0362 VCA0362 351085 351393 - hypothetical protein gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0362 VCA0363 VCA0363 VCA0363 351512 352195 + hypothetical protein gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0363 VCA0364 VCA0364 VCA0364 352409 352675 + hypothetical protein gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0364 VCA0365 VCA0365 VCA0365 352830 353428 + gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0365 VCA0366 VCA0366 VCA0366 353709 354644 + hypothetical protein gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0366 VCA0367 VCA0367 VCA0367 354862 355884 + hypothetical protein gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0367 VCA0368 VCA0368 VCA0368 355817 356431 + hypothetical protein gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0368 VCA0369 VCA0369 VCA0369 356492 356866 - hypothetical protein gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0369 VCA0370 VCA0370 VCA0370 356492 357187 - hypothetical protein gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0370 VCA0371 VCA0371 VCA0371 357184 358056 - transposase OrfAB subunit B similar to GP:3337013%3B identified by sequence similarity gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0371 VCA0372 VCA0372 VCA0372 358053 358397 - transposase OrfAB subunit A similar to SP:P39213%3B identified by sequence similarity gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0372 VCA0374 VCA0374 VCA0374 358749 359786 + hypothetical protein gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0374 VCA0375 VCA0375 VCA0375 359966 360289 + hypothetical protein gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0375 VCA0376 VCA0376 VCA0376 360542 360937 + hypothetical protein gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0376 VCA0378 VCA0378 VCA0378 361243 361421 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0378 VCA0379 VCA0379 VCA0379 361598 361993 + hypothetical protein gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0379 VCA0380 VCA0380 VCA0380 362137 362673 + hypothetical protein gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0380 VCA0381 VCA0381 VCA0381 362970 363149 + hypothetical protein gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0381 VCA0382 VCA0382 VCA0382 363345 363770 + hypothetical protein gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0382 VCA0382a VCA0382a VCA0382a 363919 364266 + membrane protein gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0382a VCA0385 VCA0385 VCA0385 365351 365686 - hypothetical protein gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0385 VCA0386 VCA0386 VCA0386 365687 365929 - hypothetical protein gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0386 VCA0387 VCA0387 VCA0387 366171 366680 + toxin resistance protein similar to GP:3095168%3B identified by sequence similarity gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0387 VCA0388 VCA0388 VCA0388 366737 367390 + hypothetical protein gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0388 VCA0389 VCA0389 VCA0389 367685 367918 + hypothetical protein gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0389 VCA0391 VCA0391 VCA0391 369360 369713 + killer protein similar to GB:L42023 SP:P44138 PID:1007172 PID:1221379 PID:1205491%3B identified by sequence similarity gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0391 VCA0392 VCA0392 VCA0392 369724 370041 + antidote protein similar to GB:L42023 PID:1007174 PID:1221380 PID:1205492 SP:Q57089%3B identified by sequence similarity gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0392 VCA0395 VCA0395 VCA0395 370629 371468 + hypothetical protein gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0395 VCA0396 VCA0396 VCA0396 371673 372503 + hypothetical protein gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0396 VCA0397 VCA0397 VCA0397 372560 373042 + hypothetical protein gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0397 VCA0398 VCA0398 VCA0398 373206 373373 + hypothetical protein gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0398 VCA0399 VCA0399 VCA0399 373489 374364 + hypothetical protein gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0399 VCA0400 VCA0400 VCA0400 374494 374949 + acetyltransferase similar to GB:AE000657%3B identified by sequence similarity gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0400 VCA0401 VCA0401 VCA0401 375133 375546 + hypothetical protein gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0401 VCA0402 VCA0402 VCA0402 375697 376131 + acetyltransferase similar to PID:1222692%3B identified by sequence similarity gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0402 VCA0403 VCA0403 VCA0403 376324 376581 + hypothetical protein gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0403 VCA0405 VCA0405 VCA0405 377315 377935 + hypothetical protein gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0405 VCA0406 VCA0406 VCA0406 378083 378598 + lipoprotein Blc similar to GP:2565357%3B identified by sequence similarity gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0406 VCA0407 VCA0407 VCA0407 378901 379083 + hypothetical protein gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0407 VCA0408 VCA0408 VCA0408 379262 379609 + hypothetical protein gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0408 VCA0409 VCA0409 VCA0409 379771 380229 + hypothetical protein gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0409 VCA0410 VCA0410 VCA0410 380380 380742 + hypothetical protein gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0410 VCA0412 VCA0412 VCA0412 381045 381224 + hypothetical protein gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0412 VCA0413 VCA0413 VCA0413 381420 382073 + hypothetical protein gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0413 VCA0414 VCA0414 VCA0414 382198 382623 + hypothetical protein gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0414 VCA0415 VCA0415 VCA0415 382786 383145 + hypothetical protein gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0415 VCA0416 VCA0416 VCA0416 383328 383651 + hypothetical protein gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0416 VCA0417 VCA0417 VCA0417 383932 384468 + acetyltransferase similar to SP:P05332 GB:X07542 PID:39573%3B identified by sequence similarity gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0417 VCA0418 VCA0418 VCA0418 385229 385411 + hypothetical protein gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0418 VCA0419 VCA0419 VCA0419 385530 386315 + hypothetical protein gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0419 VCA0420 VCA0420 VCA0420 386465 386779 + hypothetical protein gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0420 VCA0421 VCA0421 VCA0421 387025 387450 + hypothetical protein gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0421 VCA0422 VCA0422 VCA0422 387652 387945 + hypothetical protein gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0422 VCA0423 VCA0423 VCA0423 387942 388301 + hypothetical protein gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0423 VCA0424 VCA0424 VCA0424 388283 388729 + hypothetical protein gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0424 VCA0425 VCA0425 VCA0425 388985 389410 + hypothetical protein gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0425 VCA0426 VCA0426 VCA0426 389588 389821 + hypothetical protein gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0426 VCA0427 VCA0427 VCA0427 389797 389955 - hypothetical protein gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0427 VCA0428 VCA0428 VCA0428 390185 390610 + hypothetical protein gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0428 VCA0431 VCA0431 VCA0431 391439 391753 + hypothetical protein gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0431 VCA0432 VCA0432 VCA0432 391927 392361 + hypothetical protein gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0432 VCA0433 VCA0433 VCA0433 392515 393372 + hypothetical protein gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0433 VCA0435 VCA0435 VCA0435 393668 393847 + hypothetical protein gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0435 VCA0436 VCA0436 VCA0436 394041 394556 + acetyltransferase similar to GB:AL009126%3B identified by sequence similarity gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0436 VCA0439 VCA0439 VCA0439 395245 396249 + microcin immunity protein MccF similar to GP:2565352%3B identified by sequence similarity gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0439 VCA0440 VCA0440 VCA0440 396402 396848 + hypothetical protein gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0440 VCA0441 VCA0441 VCA0441 396968 397897 + hypothetical protein gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0441 VCA0442 VCA0442 VCA0442 398032 398508 + acetyltransferase similar to GB:D25276 SP:P37354 PID:517105 GB:U00096 PID:1742583%3B identified by sequence similarity gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0442 VCA0443 VCA0443 VCA0443 398645 399160 + lipoprotein Blc similar to GP:2565357%3B identified by sequence similarity gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0443 VCA0444 VCA0444 VCA0444 399296 399586 - RelE protein similar to SP:P07008 GB:X02405 PID:42701 GB:U00096 PID:1787846%3B identified by sequence similarity gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0444 VCA0445 VCA0445 VCA0445 399576 399824 - hypothetical protein gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0445 VCA0446 VCA0446 VCA0446 400089 400280 + hemagglutinin similar to GB:X64097 PID:396848 PID:48356%3B identified by sequence similarity gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0446 VCA0447 VCA0447 VCA0447 400356 401048 + hemagglutinin associated protein similar to GB:X64387 PID:396849 PID:48357%3B identified by sequence similarity gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0447 VCA0448 VCA0448 VCA0448 401320 401745 + hypothetical protein gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0448 VCA0449 VCA0449 VCA0449 401923 402348 + hypothetical protein gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0449 VCA0450 VCA0450 VCA0450 402499 403029 + hypothetical protein gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0450 VCA0451 VCA0451 VCA0451 403167 403667 + hypothetical protein gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0451 VCA0453 VCA0453 VCA0453 404320 404784 - hypothetical protein gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0453 VCA0454 VCA0454 VCA0454 405167 406015 - sulfate-binding protein gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0454 VCA0455 VCA0455 VCA0455 406385 406981 + hypothetical protein gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0455 VCA0457 VCA0457 VCA0457 407778 408392 + hypothetical protein gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0457 VCA0458 VCA0458 VCA0458 408539 409396 + hypothetical protein gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0458 VCA0459 VCA0459 VCA0459 409543 410103 + hypothetical protein gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0459 VCA0460 VCA0460 VCA0460 410246 410593 + hypothetical protein gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0460 VCA0463 VCA0463 VCA0463 412362 412760 + biphenyl-2%2C3-diol 1%2C2-dioxygenase similar to GB:X75635 SP:P47233 PID:473121%3B identified by sequence similarity gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0463 VCA0464 VCA0464 VCA0464 412827 413204 + hypothetical protein gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0464 VCA0465 VCA0465 VCA0465 413348 413752 + hypothetical protein gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0465 VCA0466 VCA0466 VCA0466 414129 414287 - hypothetical protein gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0466 VCA0467 VCA0467 VCA0467 414638 414796 - hypothetical protein gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0467 VCA0468 VCA0468 VCA0468 414949 415281 + hypothetical protein gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0468 VCA0469 VCA0469 VCA0469 415268 415582 + hypothetical protein gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0469 VCA0470 VCA0470 VCA0470 415719 416153 + acetyltransferase similar to GB:U00096 PID:1788774%3B identified by sequence similarity gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0470 VCA0471 VCA0471 VCA0471 416321 416476 + hypothetical protein gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0471 VCA0472 VCA0472 VCA0472 416601 417581 - IS5 transposase similar to GB:J01735%3B identified by sequence similarity gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0472 VCA0473 VCA0473 VCA0473 417604 417921 + acetyltransferase similar to PID:1181627 PID:1196901%3B identified by sequence similarity gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0473 VCA0474 VCA0474 VCA0474 418092 418784 + acetyltransferase similar to SP:P39909 PID:600711 PID:1303698 GB:AL009126%3B identified by sequence similarity gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0474 VCA0475 VCA0475 VCA0475 418784 419185 + doc protein similar to PID:1359621%3B identified by sequence similarity gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0475 VCA0476 VCA0476 VCA0476 419373 419786 + hypothetical protein gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0476 VCA0477 VCA0477 VCA0477 419979 420251 + hypothetical protein gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0477 VCA0478 VCA0478 VCA0478 420238 420528 + hypothetical protein gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0478 VCA0479 VCA0479 VCA0479 420656 421111 + acetyltransferase similar to GB:AE000657%3B identified by sequence similarity gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0479 VCA0480 VCA0480 VCA0480 421433 421585 + hypothetical protein gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0480 VCA0481 VCA0481 VCA0481 421787 422284 - hypothetical protein gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0481 VCA0482 VCA0482 VCA0482 422281 422553 - hypothetical protein gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0482 VCA0483 VCA0483 VCA0483 422784 423452 + hypothetical protein gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0483 VCA0484 VCA0484 VCA0484 423604 423891 + hypothetical protein gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0484 VCA0485 VCA0485 VCA0485 424032 424403 + MazG domain-containing protein similar to GB:J04039 SP:P33646 PID:416198 PID:882675 GB:U00096%3B identified by sequence similarity gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0485 VCA0486 VCA0486 VCA0486 424626 424895 + hypothetical protein gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0486 VCA0487 VCA0487 VCA0487 424892 425425 + hypothetical protein gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0487 VCA0488 VCA0488 VCA0488 425627 425884 + hypothetical protein gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0488 VCA0489 VCA0489 VCA0489 425872 426174 + hypothetical protein gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0489 VCA0490 VCA0490 VCA0490 426408 427325 + GDXG family lipase similar to GB:AE000782%3B identified by sequence similarity gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0490 VCA0491 VCA0491 VCA0491 427482 427871 + hypothetical protein gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0491 VCA0492 VCA0492 VCA0492 428007 428260 + 'This region contains an authentic point mutation%2C causing a premature stop%2C and is not the result of a sequencing artifact.' gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0492 VCA0493 VCA0493 VCA0493 428335 428772 + IS1004 transposase similar to PID:1054866 PID:2271024%3B identified by sequence similarity gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0493 VCA0494 VCA0494 VCA0494 428878 429054 + hypothetical protein gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0494 VCA0495 VCA0495 VCA0495 429229 430101 + hypothetical protein gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0495 VCA0496 VCA0496 VCA0496 430170 430850 + glutathione S-transferase similar to SP:P28342 PID:167968 PID:18330%3B identified by sequence similarity gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0496 VCA0497 VCA0497 VCA0497 431036 431311 + hypothetical protein gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0497 VCA0498 VCA0498 VCA0498 431305 431826 + hypothetical protein gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0498 VCA0501 VCA0501 VCA0501 432501 432896 + hypothetical protein gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0501 VCA0503 VCA0503 VCA0503 433035 433313 - hypothetical protein gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0503 VCA0504 VCA0504 VCA0504 433310 433594 - RelB protein similar to SP:P07007 GB:X02405 PID:42700 GB:U00096 PID:1742559%3B identified by sequence similarity gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0504 VCA0505 VCA0505 VCA0505 433788 434303 + acetyltransferase similar to SP:P05332 GB:X07542 PID:39573%3B identified by sequence similarity gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0505 VCA0506 VCA0506 VCA0506 434487 434900 + hypothetical protein gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0506 VCA0507 VCA0507 VCA0507 435419 435763 + transposase OrfAB subunit A similar to SP:P39213%3B identified by sequence similarity gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0507 VCA0508 VCA0508 VCA0508 435760 436632 + transposase OrfAB subunit B similar to GP:3337013%3B identified by sequence similarity gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0508 VCA0510 VCA0510 VCA0510 436922 439828 + hypothetical protein gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0510 VCA0511 VCA0511 VCA0511 440291 442411 + anaerobic ribonucleoside triphosphate reductase Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0511 VCA0512 VCA0512 nrdG nrdG 442416 442883 + anaerobic ribonucleotide reductase-activating protein activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0512 VCA0513 VCA0513 VCA0513 443005 444186 + aromatic amino acid aminotransferase catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0513 VCA0514 VCA0514 VCA0514 444244 444927 + hypothetical protein gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0514 VCA0516 VCA0516 VCA0516 445161 446903 - PTS system fructose-specific transporter subunit IIBC similar to SP:P20966 GB:M23196 PID:405893 PID:450372 GB:U00096%3B identified by sequence similarity gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0516 VCA0517 VCA0517 VCA0517 446916 447869 - 1-phosphofructokinase similar to SP:P23539 GB:X53948 PID:405894 PID:41487 GB:U00096%3B identified by sequence similarity gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0517 VCA0518 VCA0518 VCA0518 447880 449082 - PTS system fructose-specific transporter subunit IIA/HPr protein 'phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr' gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0518 VCA0519 VCA0519 VCA0519 449421 450401 + DNA-binding transcriptional regulator FruR binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0519 VCA0520 VCA0520 VCA0520 450455 451594 + exonuclease SbcD similar to GB:AE000520%3B identified by sequence similarity gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0520 VCA0521 VCA0521 VCA0521 451596 454637 + exonuclease SbcC similar to GB:AE000520%3B identified by sequence similarity gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0521 VCA0522 VCA0522 VCA0522 454734 456794 + sensor histidine kinase/response regulator LuxN similar to PID:1653075%3B identified by sequence similarity gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0522 VCA0523 VCA0523 VCA0523 457023 458192 - hypothetical protein similar to GB:L42023 SP:P44422 PID:1007761 PID:1221700 PID:1205788%3B identified by sequence similarity gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0523 VCA0524 VCA0524 VCA0524 458389 459351 - hypothetical protein gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0524 VCA0526 VCA0526 VCA0526 459498 460904 - chloride channel protein Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0526 VCA0527 VCA0527 VCA0527 461371 462360 + hypothetical protein gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0527 VCA0528 VCA0528 rbgA rbgA 462424 463368 - ribosomal biogenesis GTPase essential GTPase%3B functions in ribosome assembly%3B binds a unique part of the 23S rRNA%3B interacts with ribosomal protein L25(Ctc) gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0528 VCA0529 VCA0529 VCA0529 463691 465553 + potassium uptake protein%2C Kup system similar to SP:P30016 GB:X68551 PID:41888 PID:290597 GB:U00096%3B identified by sequence similarity gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0529 VCA0530 VCA0530 VCA0530 465651 468890 - pyruvate-flavoredoxin oxidoreductase similar to GB:U00096 PID:1742250 PID:1742256 PID:1787642%3B identified by sequence similarity gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0530 VCA0531 VCA0531 VCA0531 468993 470486 + sensor histidine kinase similar to GB:M36066 SP:P21865 PID:146551 GB:U00096 PID:1651302%3B identified by sequence similarity gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0531 VCA0532 VCA0532 VCA0532 470476 471168 + DNA-binding response regulator similar to GB:U00096 PID:1651301 PID:1786911%3B identified by sequence similarity gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0532 VCA0533 VCA0533 VCA0533 471368 471604 + Tata protein similar to GB:M87049 SP:P27856 PID:148236 GB:U00096 PID:2367310%3B identified by sequence similarity gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0533 VCA0534 VCA0534 VCA0534 471820 472495 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0534 VCA0535 VCA0535 VCA0535 472658 473038 - hypothetical protein gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0535 VCA0536 VCA0536 VCA0536 473172 474038 - hypothetical protein gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0536 VCA0537 VCA0537 VCA0537 474365 474999 - gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0537 VCA0538 VCA0538 VCA0538 475386 475931 + cytochrome b561 similar to PID:1236738 GB:U00096 PID:1787296%3B identified by sequence similarity gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0538 VCA0539 VCA0539 VCA0539 475928 476497 + hypothetical protein gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0539 VCA0540 VCA0540 VCA0540 476605 478056 - formate transporter 1 similar to SP:P21501 PID:147154 GB:U00096 PID:1651428 PID:1651435%3B identified by sequence similarity gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0540 VCA0542 VCA0542 VCA0542 478273 479178 + LysR family transcriptional regulator similar to SP:P32484 PID:405876 PID:466777 GB:U00096 PID:1788481%3B identified by sequence similarity gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0542 VCA0543 VCA0543 VCA0543 479340 479852 + hypothetical protein gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0543 VCA0544 VCA0544 VCA0544 480084 481748 - hypothetical protein gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0544 VCA0545 VCA0545 VCA0545 481978 483720 + 5`-nucleotidase similar to GB:AE000520%3B identified by sequence similarity gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0545 VCA0546 VCA0546 VCA0546 484280 485236 + hypothetical protein gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0546 VCA0547 VCA0547 VCA0547 485540 485728 + hypothetical protein gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0547 VCA0549 VCA0549 VCA0549 485878 486453 - phnA protein similar to SP:P16680 GB:U14003 PID:147194 PID:536952 GB:U00096%3B identified by sequence similarity gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0549 VCA0550 VCA0550 VCA0550 486637 487719 + hypothetical protein gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0550 VCA0551 VCA0551 VCA0551 487773 488003 - hypothetical protein gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0551 VCA0552 VCA0552 VCA0552 488171 490471 - fatty acid cis/trans isomerase similar to GP:2612821%3B identified by sequence similarity gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0552 VCA0553 VCA0553 VCA0553 490560 490733 - hypothetical protein gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0553 VCA0554 VCA0554 VCA0554 490884 492116 - oxalate/formate antiporter similar to GB:AE000782%3B identified by sequence similarity gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0554 VCA0556 VCA0556 VCA0556 492527 493081 + hypothetical protein gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0556 VCA0557 VCA0557 VCA0557 493351 494760 + diguanylate cyclase similar to GB:U00096 SP:P75908 PID:1787262%3B identified by sequence similarity gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0557 VCA0558 VCA0558 VCA0558 495055 496623 + gamma-glutamyltranspeptidase similar to GB:AL009126%3B identified by sequence similarity gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0558 VCA0559 VCA0559 VCA0559 496698 497681 + hypothetical protein gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0559 VCA0560 VCA0560 VCA0560 497678 498916 - diguanylate cyclase similar to GP:3392922%3B identified by sequence similarity gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0560 VCA0561 VCA0561 VCA0561 499272 499646 + hypothetical protein gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0561 VCA0562 VCA0562 VCA0562 499656 499934 + hypothetical protein gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0562 VCA0563 VCA0563 pntA pntA 500227 501765 + NAD(P) transhydrogenase subunit alpha forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0563 VCA0564 VCA0564 pntB pntB 501777 503153 + pyridine nucleotide transhydrogenase catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0564 VCA0565 VCA0565 VCA0565 503254 504753 + sensor histidine kinase similar to GB:AE000511 PID:2313251%3B identified by sequence similarity gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0565 VCA0566 VCA0566 VCA0566 504647 505384 + transcriptional regulator similar to SP:Q11156 PID:1449289 PID:2190480 GB:AL123456%3B identified by sequence similarity gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0566 VCA0567 VCA0567 VCA0567 505381 506271 + hypothetical protein gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0567 VCA0568 VCA0568 VCA0568 506332 507498 + hypothetical protein gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0568 VCA0569 VCA0569 VCA0569 507539 507700 + hypothetical protein gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0569 VCA0570 VCA0570 VCA0570 508285 508596 - translation initiation factor Sui1 involved in start site selection during the initiation of translation gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0570 VCA0571 VCA0571 VCA0571 508604 508987 - hypothetical protein gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0571 VCA0572 VCA0572 ddl ddl 509159 510163 - D-alanyl-alanine synthetase A D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0572 VCA0573 VCA0573 VCA0573 510314 510901 - DamX-like protein similar to SP:P11557 GB:Z19601 PID:41226 PID:43274 PID:606322%3B identified by sequence similarity gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0573 VCA0574 VCA0574 VCA0574 511108 513789 + hypothetical protein gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0574 VCA0575 VCA0575 VCA0575 513839 514726 - LysR family transcriptional regulator similar to SP:P42623 PID:606046 GB:U00096 PID:1789492%3B identified by sequence similarity gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0575 VCA0576 VCA0576 VCA0576 514944 517040 + heme transport protein HutA similar to GB:L27149 PID:529727%3B identified by sequence similarity gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0576 VCA0578 VCA0578 VCA0578 517364 519061 - hypothetical protein gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0578 VCA0579 VCA0579 VCA0579 519142 519375 - hypothetical protein gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0579 VCA0580 VCA0580 VCA0580 519376 519861 - hypothetical protein gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0580 VCA0581 VCA0581 VCA0581 519996 520787 + hypothetical protein gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0581 VCA0582 VCA0582 VCA0582 520899 521381 - hypothetical protein gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0582 VCA0583 VCA0583 VCA0583 521497 522282 + hypothetical protein gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0583 VCA0584 VCA0584 VCA0584 522368 523036 - glutathione S-transferase similar to PID:643638%3B identified by sequence similarity gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0584 VCA0585 VCA0585 VCA0585 523048 523659 - glutathione S-transferase similar to PID:2266412%3B identified by sequence similarity gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0585 VCA0586 VCA0586 VCA0586 523761 524357 + hypothetical protein gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0586 VCA0587 VCA0587 VCA0587 524354 524746 + hypothetical protein gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0587 VCA0588 VCA0588 VCA0588 524830 526422 - peptide ABC transporter ATP-binding protein similar to SP:P33916 PID:405909 GB:U00096 PID:1736845 PID:1788506%3B identified by sequence similarity gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0588 VCA0589 VCA0589 VCA0589 526419 527477 - peptide ABC transporter permease similar to SP:P33915 GB:U00008 PID:405908 GB:U00096 PID:1736844%3B identified by sequence similarity gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0589 VCA0590 VCA0590 VCA0590 527474 528556 - peptide ABC transporter permease similar to SP:P33914 GB:U00008 PID:405905 GB:U00096 PID:1736843%3B identified by sequence similarity gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0590 VCA0591 VCA0591 VCA0591 528565 530400 - peptide ABC transporter substrate-binding protein similar to SP:P33913 GB:U00008 PID:453986 GB:U00096 PID:1788503%3B identified by sequence similarity gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0591 VCA0592 VCA0592 VCA0592 530597 531157 - MutT/nudix family protein similar to SP:P46351%3B identified by sequence similarity gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0592 VCA0593 VCA0593 VCA0593 531211 532143 - hypothetical protein gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0593 VCA0594 VCA0594 VCA0594 532353 532634 + hemolysin similar to PID:1197184%3B identified by sequence similarity gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0594 VCA0595 VCA0595 VCA0595 532716 533669 - hypothetical protein gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0595 VCA0596 VCA0596 VCA0596 533888 535361 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0596 VCA0599 VCA0599 VCA0599 535461 536366 - hypothetical protein gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0599 VCA0600 VCA0600 VCA0600 536432 537136 - repressor protein PhnR similar to GP:1763080%3B identified by sequence similarity gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0600 VCA0601 VCA0601 VCA0601 537161 538939 - ABC transporter permease similar to GB:L42023 PID:1003160 PID:1222041 PID:1204387 PID:1573082%3B identified by sequence similarity gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0601 VCA0602 VCA0602 VCA0602 538872 540083 - ABC transporter ATP-binding protein similar to PID:1653298%3B identified by sequence similarity gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0602 VCA0603 VCA0603 VCA0603 540239 541258 - ABC transporter substrate-binding protein similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164%3B identified by sequence similarity gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0603 VCA0604 VCA0604 VCA0604 541490 542593 + 2-aminoethylphosphonate--pyruvate transaminase catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0604 VCA0605 VCA0605 VCA0605 542611 544008 + 4-aminobutyrate aminotransferase catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0605 VCA0606 VCA0606 VCA0606 544015 544830 + phosphonoacetaldehyde hydrolase catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0606 VCA0607 VCA0607 VCA0607 544995 545402 + nucleoside diphosphate kinase regulator 'Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis%2C CTP for lipid synthesis%2C and GTP for protein elongation' gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0607 VCA0608 VCA0608 VCA0608 545462 546136 - nucleotidase 'manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily' gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0608 VCA0609 VCA0609 VCA0609 546331 546513 + hypothetical protein gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0609 VCA0610 VCA0610 VCA0610 546518 547168 + isoprenoid biosynthesis protein similar to GB:D13188 SP:P26428 PID:436038 PID:606148 GB:U00096%3B identified by sequence similarity gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0610 VCA0612 VCA0612 mscL mscL 547439 547849 + large-conductance mechanosensitive channel forms homopentamer%3B channel that opens in response to pressure or hypoosmotic shock gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0612 VCA0614 VCA0614 VCA0614 548080 549828 + formate--tetrahydrofolate ligase catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0614 VCA0615 VCA0615 VCA0615 549956 551140 + bifunctional methionine sulfoxide reductase A/B 'this fusion consists of methionine sulfoxide A reductase at the N-terminus and B at the C-terminus%3B A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress%2C S and R epimers of methionine sulfoxide%2C respectively%3B a fusion' gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0615 VCA0616 VCA0616 folE folE 551233 551925 - GTP cyclohydrolase I 'involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer' gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0616 VCA0617 VCA0617 VCA0617 552038 553273 + molybdopterin biosynthesis MoeA protein similar to GB:M21151 SP:P12281 PID:145539 GB:U00096 PID:1651376%3B identified by sequence similarity gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0617 VCA0618 VCA0618 VCA0618 553276 554040 + molybdopterin biosynthesis protein MoeB 'ATP-dependent adenylate transferase%2C transfers adenyl moiety to the MoeD subunit of molybdopterin synthase' gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0618 VCA0619 VCA0619 VCA0619 554224 554592 + hypothetical protein gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0619 VCA0620 VCA0620 VCA0620 554614 555444 + thiosulfate sulfurtransferase SseA similar to SP:P31142 GB:U00096 PID:1788869 PID:1799924%3B identified by sequence similarity gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0620 VCA0621 VCA0621 VCA0621 555529 556524 - SorC family transcriptional regulator similar to SP:P39140 PID:558556 PID:1408505 GB:AL009126%3B identified by sequence similarity gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0621 VCA0622 VCA0622 VCA0622 556523 556633 + hypothetical protein gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0622 VCA0623 VCA0623 VCA0623 557117 558067 + transaldolase B Maintains the balance of metabolites in the pentose-phosphate pathway gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0623 VCA0624 VCA0624 VCA0624 558116 560158 + transketolase 'catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase' gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0624 VCA0625 VCA0625 VCA0625 560275 562629 - TonB receptor-like protein similar to PID:1638846%3B identified by sequence similarity gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0625 VCA0627 VCA0627 VCA0627 562843 563355 + rRNA methylase similar to GP:3328978%3B identified by sequence similarity gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0627 VCA0628 VCA0628 VCA0628 563793 565967 + SecA-like protein similar to GB:X79725 SP:P47994 PID:499335%3B identified by sequence similarity gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0628 VCA0629 VCA0629 VCA0629 566238 567278 - hypothetical protein gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0629 VCA0630 VCA0630 VCA0630 567291 568262 - D-3-phosphoglycerate dehydrogenase similar to GB:Pyro_h%3B identified by sequence similarity gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0630 VCA0631 VCA0631 VCA0631 568278 568793 - hypothetical protein gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0631 VCA0632 VCA0632 VCA0632 568826 569275 - MutT/nudix family protein similar to GB:U00096 PID:1742868 PID:1788056%3B identified by sequence similarity gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0632 VCA0633 VCA0633 VCA0633 569315 569665 - membrane protein GlpM similar to GB:L06231 PID:1066871 SP:P52112%3B identified by sequence similarity gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0633 VCA0634 VCA0634 VCA0634 569857 570582 + hypothetical protein gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0634 VCA0635 VCA0635 VCA0635 570592 571533 + LysR family transcriptional regulator similar to GB:U00096 PID:1788100%3B identified by sequence similarity gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0635 VCA0636 VCA0636 VCA0636 571530 571820 - hypothetical protein gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0636 VCA0637 VCA0637 VCA0637 571824 572477 - dihydropteridine reductase 'catalyzes the reduction of nitroaromatic compounds such as nitrofurazone%2C quinones and the anti-tumor agent CB1954%3B NAD(P)H-dependent%3B oxygen insensitive' gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0637 VCA0638 VCA0638 VCA0638 572693 575896 - AcrB/AcrD/AcrF family transporter similar to GB:AE000657%3B identified by sequence similarity gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0638 VCA0639 VCA0639 VCA0639 575853 576857 - AcrA/AcrE family protein similar to GB:AE000657%3B identified by sequence similarity gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0639 VCA0640 VCA0640 VCA0640 576967 577431 - hypothetical protein gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0640 VCA0641 VCA0641 VCA0641 577436 577855 - hypothetical protein gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0641 VCA0642 VCA0642 VCA0642 577872 578189 - ArsR family transcriptional regulator similar to GB:X66866 PID:403332 SP:P52695%3B identified by sequence similarity gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0642 VCA0643 VCA0643 VCA0643 578344 578529 + hypothetical protein gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0643 VCA0644 VCA0644 VCA0644 578595 580298 + NADH oxidase similar to GB:AE000782%3B identified by sequence similarity gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0644 VCA0645 VCA0645 VCA0645 580391 580771 - hypothetical protein gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0645 VCA0646 VCA0646 VCA0646 580887 582632 - hemolysin gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0646 VCA0647 VCA0647 VCA0647 582629 583075 - hypothetical protein gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0647 VCA0648 VCA0648 VCA0648 583086 583832 - hypothetical protein gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0648 VCA0649 VCA0649 VCA0649 583832 584374 - hypothetical protein gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0649 VCA0650 VCA0650 VCA0650 584463 585599 - hypothetical protein gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0650 VCA0651 VCA0651 VCA0651 585596 586177 - hypothetical protein gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0651 VCA0652 VCA0652 VCA0652 586449 586886 + hypothetical protein gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0652 VCA0653 VCA0653 VCA0653 587052 588491 - PTS system sucrose-specific transporter subunit IIBC similar to GB:M76768 SP:P22825 PID:155262%3B identified by sequence similarity gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0653 VCA0654 VCA0654 VCA0654 588792 589784 + sucrose operon repressor ScrR similar to GB:L14685 PID:289864%3B identified by sequence similarity gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0654 VCA0655 VCA0655 VCA0655 589860 591506 + sucrose-6-phosphate dehydrogenase similar to GB:M74035 PID:155269%3B identified by sequence similarity gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0655 VCA0656 VCA0656 VCA0656 591628 592599 - aminoimidazole riboside kinase phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P)%3B synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0656 VCA0657 VCA0657 glpD glpD 592946 594484 + glycerol-3-phosphate dehydrogenase in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0657 VCA0658 VCA0658 VCA0658 594586 596196 - methyl-accepting chemotaxis protein similar to GB:X61367 PID:48195%3B identified by sequence similarity gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0658 VCA0659 VCA0659 VCA0659 596382 597005 - protein F-like protein similar to PID:2062640%3B identified by sequence similarity gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0659 VCA0661 VCA0661 VCA0661 597218 597691 + peptidyl-prolyl cis-trans isomerase-like protein similar to GB:U14003 SP:P39311 PID:537048 GB:U00096 PID:1790652%3B identified by sequence similarity gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0661 VCA0662 VCA0662 VCA0662 597772 598410 - CbbY family protein similar to GB:U00096 PID:1789046%3B identified by sequence similarity gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0662 VCA0663 VCA0663 VCA0663 598557 600320 + methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0663 VCA0665 VCA0665 dcuC dcuC 600714 602093 + C4-dicarboxylate transporter DcuC responsible for the transport of C4-dicarboxylates during anaerobic growth gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0665 VCA0666 VCA0666 VCA0666 602191 603621 - L-serine dehydratase 1 similar to GB:M28695 SP:P16095 PID:290464 GB:U00096 PID:1736451%3B identified by sequence similarity gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0666 VCA0667 VCA0667 VCA0667 603572 605113 - sodium/solute symporter similar to PID:1653432%3B identified by sequence similarity gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0667 VCA0669 VCA0669 VCA0669 605452 606747 + sugar transporter family protein similar to SP:P41036 PID:606163 PID:639470 GB:U00096 PID:1789618%3B identified by sequence similarity gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0669 VCA0671 VCA0671 VCA0671 606844 607860 + hypothetical protein gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0671 VCA0673 VCA0673 VCA0673 608100 609131 + LacI family transcriptional regulator similar to GB:AL009126%3B identified by sequence similarity gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0673 VCA0674 VCA0674 VCA0674 609182 609807 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0674 VCA0675 VCA0675 VCA0675 609797 611548 - nitrate/nitrite sensor protein NarQ similar to GB:M94724 SP:P27896 GB:X65714 PID:146928 PID:581139%3B identified by sequence similarity gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0675 VCA0676 VCA0676 VCA0676 611706 612212 + (Fe-S)-binding protein similar to SP:P33939 PID:453990 GB:U00096 PID:1736849 PID:1788536%3B identified by sequence similarity gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0676 VCA0677 VCA0677 VCA0677 612218 612559 + nitrate reductase assembly protein NapD similar to SP:P33938 PID:405935 GB:U00096 PID:1788535%3B identified by sequence similarity gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0677 VCA0678 VCA0678 VCA0678 612556 615045 + nitrate reductase catalytic subunit periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0678 VCA0679 VCA0679 VCA0679 615112 615567 + periplasmic nitrate reductase cytochrome c-type protein similar to GB:X71385 SP:P39186 PID:402548%3B identified by sequence similarity gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0679 VCA0680 VCA0680 VCA0680 615585 616160 + periplasmic nitrate reductase cytochrome c-type protein similar to PID:1150572 SP:Q53178%3B identified by sequence similarity gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0680 VCA0681 VCA0681 VCA0681 616344 617639 - hypothetical protein gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0681 VCA0682 VCA0682 VCA0682 617798 618424 + transcriptional regulator UhpA similar to GB:L10328 SP:P10940 GB:M89479 PID:148112 PID:148117%3B identified by sequence similarity gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0682 VCA0683 VCA0683 VCA0683 618427 620010 + sensor protein UhpB similar to GB:M89480 SP:P27668 PID:154409%3B identified by sequence similarity gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0683 VCA0684 VCA0684 VCA0684 620078 621388 + regulatory protein UhpC membrane protein regulates uhpT expression gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0684 VCA0685 VCA0685 VCA0685 621501 622535 + iron(III) ABC transporter substrate-binding protein similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164%3B identified by sequence similarity gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0685 VCA0686 VCA0686 VCA0686 622639 624741 + iron(III) ABC transporter permease similar to PID:1469285 PID:1477454%3B identified by sequence similarity gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0686 VCA0687 VCA0687 fbpC fbpC 624753 625808 + ferric transporter ATP-binding subunit Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0687 VCA0688 VCA0688 VCA0688 625894 627669 - polyhydroxyalkanoic acid synthase similar to GB:U04848 GB:L37761 PID:443736 PID:576785%3B identified by sequence similarity gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0688 VCA0689 VCA0689 VCA0689 627727 628074 - hypothetical protein gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0689 VCA0690 VCA0690 VCA0690 628104 629309 - acetyl-CoA acetyltransferase 'Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B in Rhizobia and Ralstonia is involved in PHB biosynthesis' gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0690 VCA0691 VCA0691 VCA0691 629322 630062 - acetoacetyl-CoA reductase catalyzes the conversion of 3-hydroxyacyl-CoA to 3-oxyacyl-CoA gene gene3307 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0691 VCA0692 VCA0692 VCA0692 630733 631633 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3308 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0692 VCA0693 VCA0693 secD secD 631637 633475 - preprotein translocase subunit SecD 'part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane' gene gene3309 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0693 VCA0694 VCA0694 VCA0694 633547 634002 - hypothetical protein gene gene3310 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0694 VCA0695 VCA0695 VCA0695 634079 634750 - hypothetical protein gene gene3311 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0695 VCA0697 VCA0697 VCA0697 635108 637036 + sensory box/GGDEF family protein similar to PID:1001780 PID:1001841%3B identified by sequence similarity gene gene3312 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0697 VCA0699 VCA0699 glgC glgC 637339 638562 + glucose-1-phosphate adenylyltransferase catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate gene gene3313 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0699 VCA0700 VCA0700 VCA0700 638828 641983 - chitodextrinase similar to GP:3928775%3B identified by sequence similarity gene gene3314 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0700 VCA0702 VCA0702 VCA0702 642655 643803 + iron-containing alcohol dehydrogenase similar to PID:882540 GB:U00096 PID:1789386%3B identified by sequence similarity gene gene3315 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0702 VCA0703 VCA0703 VCA0703 643882 644571 + hypothetical protein gene gene3316 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0703 VCA0704 VCA0704 VCA0704 644568 645887 - phosphoglycerate transport system transcriptional regulatory protein PgtA similar to GB:M13923 SP:P06184 PID:154255%3B identified by sequence similarity gene gene3317 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0704 VCA0705 VCA0705 VCA0705 645805 648174 - phosphoglycerate transport regulatory protein PgtB similar to PID:858753%3B identified by sequence similarity gene gene3318 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0705 VCA0706 VCA0706 VCA0706 648171 649493 - phosphoglycerate transport regulatory protein PgtC similar to GB:M21279 SP:P37591 GB:X52093 PID:154258%3B identified by sequence similarity gene gene3319 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0706 VCA0707 VCA0707 VCA0707 649740 651119 + regulatory protein UhpC similar to GB:M89480 SP:P27669 GB:X52093 PID:154410%3B identified by sequence similarity gene gene3320 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0707 VCA0708 VCA0708 VCA0708 651241 652701 + pyruvate kinase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene3321 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0708 VCA0709 VCA0709 VCA0709 652820 655774 - sensor protein TorS similar to SP:P39453 PID:1122856 GB:U00096 PID:1787227%3B identified by sequence similarity gene gene3322 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0709 VCA0710 VCA0710 VCA0710 655805 656854 + TMAO reductase system periplasmic protein TorT periplasmic sensory protein associated with the TorRS two-component regulatory system gene gene3323 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0710 VCA0711 VCA0711 mgsA mgsA 656909 657364 + methylglyoxal synthase catalyzes the formation of methylglyoxal from glycerone phosphate gene gene3324 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0711 VCA0712 VCA0712 VCA0712 657433 658053 - pyrazinamidase/nicotinamidase similar to GB:M26934 SP:P21369 PID:145280 GB:U00096 PID:1788066%3B identified by sequence similarity gene gene3325 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0712 VCA0714 VCA0714 VCA0714 658358 658714 + diacylglycerol kinase similar to GB:L42023 SP:P44424 PID:1003561 PID:1222260 PID:1204587%3B identified by sequence similarity gene gene3326 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0714 VCA0715 VCA0715 VCA0715 658854 659171 + hypothetical protein gene gene3327 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0715 VCA0716 VCA0716 VCA0716 659164 659700 + hypothetical protein gene gene3328 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0716 VCA0717 VCA0717 helD helD 659756 661819 - DNA helicase IV catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand gene gene3329 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0717 VCA0718 VCA0718 VCA0718 662006 664183 + hypothetical protein gene gene3330 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0718 VCA0719 VCA0719 VCA0719 664193 665140 - sensor histide kinase similar to GB:L13078 SP:Q06067 PID:290419 GB:U00096 PID:1736874%3B identified by sequence similarity gene gene3331 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0719 VCA0720 VCA0720 VCA0720 665137 665712 - guanylate cyclase-like protein similar to PID:861203%3B identified by sequence similarity gene gene3332 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0720 VCA0721 VCA0721 VCA0721 665990 666151 + hypothetical protein gene gene3333 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0721 VCA0722 VCA0722 VCA0722 666208 666498 + hypothetical protein gene gene3334 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0722 VCA0723 VCA0723 VCA0723 666528 667838 + 3-hydroxy-3-methylglutaryl-CoA reductase similar to GB:AE000666%3B identified by sequence similarity gene gene3335 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0723 VCA0724 VCA0724 modC modC 667937 669037 - molybdate transporter ATP-binding protein Part of the ABC transporter complex modABC involved in molybdenum import gene gene3336 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0724 VCA0725 VCA0725 modB modB 669051 669749 - molybdate ABC transporter permease part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE gene gene3337 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0725 VCA0726 VCA0726 VCA0726 669750 670514 - molybdenum ABC transporter substrate-binding protein similar to GB:L34009 SP:P37329 PID:504498 PID:973214 PID:1147817%3B identified by sequence similarity gene gene3338 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0726 VCA0727 VCA0727 VCA0727 670520 671974 - cobyric acid synthase 'catalyzes amidations at positions B%2C D%2C E%2C and G on adenosylcobyrinic A%2CC-diamide. NH(2) groups are provided by glutamine%2C and one molecule of ATP is hydrogenolyzed for each amidation' gene gene3339 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0727 VCA0728 VCA0728 VCA0728 672577 674748 - hypothetical protein gene gene3340 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0728 VCA0729 VCA0729 VCA0729 674741 675364 - hypothetical protein gene gene3341 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0729 VCA0730 VCA0730 VCA0730 675367 677196 - hypothetical protein gene gene3342 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0730 VCA0731 VCA0731 VCA0731 677895 678200 - hypothetical protein gene gene3343 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0731 VCA0732 VCA0732 VCA0732 678403 678801 + hypothetical protein gene gene3344 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0732 VCA0733 VCA0733 VCA0733 678842 678994 + hypothetical protein gene gene3345 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0733 VCA0734 VCA0734 VCA0734 679032 679571 + hypothetical protein gene gene3346 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0734 VCA0735 VCA0735 VCA0735 679770 680480 + hypothetical protein gene gene3347 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0735 VCA0736 VCA0736 VCA0736 680472 683045 - sensor histidine kinase LuxQ similar to GB:U07069 PID:459205 SP:P54302%3B identified by sequence similarity gene gene3348 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0736 VCA0737 VCA0737 VCA0737 683063 684157 - luxP protein similar to GB:U07069 PID:459204 SP:P54300%3B identified by sequence similarity gene gene3349 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0737 VCA0738 VCA0738 VCA0738 684369 685529 - hypothetical protein gene gene3350 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0738 VCA0739 VCA0739 VCA0739 685631 685936 - hypothetical protein gene gene3351 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0739 VCA0740 VCA0740 VCA0740 685953 686603 - hypothetical protein gene gene3352 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0740 VCA0741 VCA0741 VCA0741 687029 687349 + hypothetical protein gene gene3353 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0741 VCA0742 VCA0742 VCA0742 687349 687498 + hypothetical protein gene gene3354 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0742 VCA0743 VCA0743 VCA0743 687762 688013 + hypothetical protein gene gene3355 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0743 VCA0744 VCA0744 glpK glpK 688094 689611 - glycerol kinase Converts glycerol and ADP to glycerol-3-phosphate and ADP gene gene3356 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0744 VCA0745 VCA0745 VCA0745 689741 690596 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3357 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0745 VCA0747 VCA0747 glpA glpA 691251 692894 + sn-glycerol-3-phosphate dehydrogenase subunit A 'anaerobic%2C catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor' gene gene3358 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0747 VCA0748 VCA0748 VCA0748 692891 694201 + anaerobic glycerol-3-phosphate dehydrogenase subunit B sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters gene gene3359 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0748 VCA0749 VCA0749 glpC glpC 694198 695439 + sn-glycerol-3-phosphate dehydrogenase subunit C anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate gene gene3360 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0749 VCA0751 VCA0751 VCA0751 695581 696669 - 3-oxoacyl-ACP synthase FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs%3B in Pseudomonas this protein is involved in quinolone signal biosynthesis gene gene3361 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0751 VCA0752 VCA0752 VCA0752 696838 697272 + thioredoxin 2 similar to SP:P33636 GB:U00096 PID:1788936 PID:1799987%3B identified by sequence similarity gene gene3362 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0752 VCA0753 VCA0753 VCA0753 697461 698615 + hypothetical protein gene gene3363 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0753 VCA0754 VCA0754 VCA0754 698700 699530 + lipase-like protein similar to SP:P19515 PID:488853%3B identified by sequence similarity gene gene3364 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0754 VCA0754a VCA0754a VCA0754a 699965 700465 - glyoxalase family protein gene gene3367 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0754a VCA0756 VCA0756 VCA0756 700640 701545 + LysR family transcriptional regulator similar to GB:X73124 SP:P39647 PID:580884 GB:AL009126%3B identified by sequence similarity gene gene3368 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0756 VCA0757 VCA0757 artM artM 701598 702266 - arginine transporter permease subunit ArtM with ArtPQJI acts to transport arginine across the inner membrane gene gene3369 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0757 VCA0758 VCA0758 VCA0758 702263 702952 - arginine transporter permease subunit ArtQ with ArtPMJI transports arginine across the inner membrane gene gene3370 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0758 VCA0759 VCA0759 VCA0759 702954 703685 - arginine ABC transporter substrate-binding protein similar to SP:P30859 GB:X67753 GB:X86160 PID:40931 PID:769791%3B identified by sequence similarity gene gene3371 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0759 VCA0760 VCA0760 artP artP 703759 704487 - arginine transporter ATP-binding subunit With ArtMQJI transports arginine across the inner membrane gene gene3372 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0760 VCA0762 VCA0762 yieM yieM 705080 706525 - hypothetical protein contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA gene gene3374 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0762 VCA0763 VCA0763 VCA0763 706534 708192 - hypothetical protein gene gene3375 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0763 VCA0764 VCA0764 VCA0764 708502 709059 + MutT/nudix family protein similar to SP:P54570 PID:1303984 GB:AL009126%3B identified by sequence similarity gene gene3376 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0764 VCA0765 VCA0765 VCA0765 709044 710075 + L-allo-threonine aldolase similar to GB:U00096 SP:P75823 PID:1787095 PID:2225892%3B identified by sequence similarity gene gene3377 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0765 VCA0766 VCA0766 VCA0766 710204 710512 + cytochrome c554 similar to SP:P00105%3B identified by sequence similarity gene gene3378 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0766 VCA0767 VCA0767 VCA0767 710616 711350 + TetR family transcriptional regulator similar to SP:P34000 GB:U00734 PID:532309 GB:U00096 PID:1773146%3B identified by sequence similarity gene gene3379 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0767 VCA0768 VCA0768 VCA0768 711450 712718 - DEAD/DEAH box helicase similar to GB:L02123 SP:P25888 PID:560801 GB:U00096 PID:1651360%3B identified by sequence similarity gene gene3380 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0768 VCA0769 VCA0769 VCA0769 712755 713336 - hypothetical protein gene gene3381 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0769 VCA0770 VCA0770 VCA0770 713373 713492 - hypothetical protein gene gene3382 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0770 VCA0772 VCA0772 VCA0772 713856 715058 + tyrosine-specific transport protein similar to GB:M23240 SP:P18199 PID:148089 GB:U00096 PID:1736569%3B identified by sequence similarity gene gene3383 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0772 VCA0773 VCA0773 VCA0773 715286 716707 + methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene3384 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0773 VCA0774 VCA0774 VCA0774 716793 717809 - UDP-glucose 4-epimerase similar to SP:P09147 GB:V00278 GB:X06226 GB:X51449 PID:41523%3B identified by sequence similarity gene gene3385 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0774 VCA0776 VCA0776 VCA0776 718129 718869 + LamB/YcsF family protein gene gene3386 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0776 VCA0777 VCA0777 VCA0777 718873 719583 + hypothetical protein gene gene3387 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0777 VCA0778 VCA0778 VCA0778 719693 720622 + hypothetical protein gene gene3388 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0778 VCA0779 VCA0779 VCA0779 720674 722107 - hypothetical protein gene gene3389 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0779 VCA0780 VCA0780 VCA0780 722216 723382 - UDP-glucose 6-dehydrogenase similar to GP:3721692%3B identified by sequence similarity gene gene3390 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0780 VCA0781 VCA0781 VCA0781 723771 726218 - hypothetical protein gene gene3391 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0781 VCA0782 VCA0782 VCA0782 726215 726892 - ABC transporter ATP-binding protein similar to SP:P31219 GB:U00096 PID:1773177 PID:1786703%3B identified by sequence similarity gene gene3392 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0782 VCA0783 VCA0783 VCA0783 726843 727490 + arylesterase similar to GB:X71116 SP:Q07792 PID:296403%3B identified by sequence similarity gene gene3393 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0783 VCA0784 VCA0784 VCA0784 727580 728788 + trans-2-enoyl-CoA reductase enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity gene gene3394 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0784 VCA0785 VCA0785 VCA0785 728957 730840 + diguanylate cyclase similar to PID:1651932%3B identified by sequence similarity gene gene3395 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0785 VCA0786 VCA0786 VCA0786 730966 732615 + hypothetical protein gene gene3396 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0786 VCA0787 VCA0787 VCA0787 732612 732716 - hypothetical protein gene gene3397 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0787 VCA0788 VCA0788 VCA0788 732773 733402 - DnaJ-like protein similar to SP:P48207 PID:893246%3B identified by sequence similarity gene gene3398 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0788 VCA0789 VCA0789 VCA0789 733638 734225 + hypothetical protein gene gene3399 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0789 VCA0790 VCA0790 VCA0790 734399 735778 + hypothetical protein gene gene3400 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0790 VCA0791 VCA0791 VCA0791 735771 736643 - transposase OrfAB subunit B similar to GP:3337013%3B identified by sequence similarity gene gene3401 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0791 VCA0792 VCA0792 VCA0792 736640 736984 - transposase OrfAB subunit A similar to SP:P39213%3B identified by sequence similarity gene gene3402 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0792 VCA0793 VCA0793 VCA0793 737061 737543 + hypothetical protein gene gene3403 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0793 VCA0794 VCA0794 VCA0794 737544 737837 + hypothetical protein gene gene3404 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0794 VCA0795 VCA0795 VCA0795 738052 739008 + resolvase similar to SP:P05823 GB:M15197 PID:154868%3B identified by sequence similarity gene gene3405 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0795 VCA0798 VCA0798 VCA0798 739663 740343 - CbbY family protein similar to GB:L10328 SP:P31467 PID:290563 GB:U00096 PID:1790151%3B identified by sequence similarity gene gene3406 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0798 VCA0799 VCA0799 VCA0799 740482 740988 - hypothetical protein gene gene3407 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0799 VCA0800 VCA0800 VCA0800 741310 741792 + creA protein similar to SP:P08367 GB:M13608 PID:147249 PID:147691 PID:537237%3B identified by sequence similarity gene gene3408 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0800 VCA0801 VCA0801 VCA0801 741911 743215 + inosine-guanosine kinase similar to GB:D00798 SP:P22937 PID:216562 PID:520811 PID:216519%3B identified by sequence similarity gene gene3409 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0801 VCA0802 VCA0802 VCA0802 743300 745273 - hypothetical protein gene gene3410 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0802 VCA0803 VCA0803 VCA0803 745355 746347 - serine protease similar to PID:1336053%3B identified by sequence similarity gene gene3411 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0803 VCA0804 VCA0804 VCA0804 746491 748482 - ATP-dependent RNA helicase DeaD similar to GB:L08387 SP:P33906 GB:X12599 PID:149184%3B identified by sequence similarity gene gene3412 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0804 VCA0805 VCA0805 VCA0805 748796 750832 + exoribonuclease II Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction gene gene3413 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0805 VCA0806 VCA0806 VCA0806 750927 751400 - hypothetical protein gene gene3414 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0806 VCA0807 VCA0807 VCA0807 751488 752324 + ABC transporter substrate-binding protein similar to GB:AE000666%3B identified by sequence similarity gene gene3415 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0807 VCA0808 VCA0808 VCA0808 752470 753162 - NodN-like protein similar to GB:AL123456%3B identified by sequence similarity gene gene3416 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0808 VCA0809 VCA0809 VCA0809 753436 754986 - hypothetical protein gene gene3417 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0809 VCA0811 VCA0811 VCA0811 755480 756937 + N-acetylglucosamine-binding protein A 'GbpA%3B plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium%3B in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin%2C glycoproteins and lipids on intestinal epithelial cells' gene gene3418 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0811 VCA0812 VCA0812 VCA0812 757265 758695 + leucine aminopeptidase-like protein similar to PID:1694931%3B identified by sequence similarity gene gene3419 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0812 VCA0813 VCA0813 VCA0813 758730 760235 + aminopeptidase similar to PID:1694931%3B identified by sequence similarity gene gene3420 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0813 VCA0814 VCA0814 VCA0814 760423 761352 - agmatinase catalyzes the formation of putrescine from agmatine gene gene3421 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0814 VCA0815 VCA0815 VCA0815 761353 763338 - arginine decarboxylase catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis gene gene3422 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0815 VCA0817 VCA0817 VCA0817 763686 764270 + hypothetical protein gene gene3423 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0817 VCA0818 VCA0818 VCA0818 764273 765637 + magnesium transporter MgtE similar to PID:1652477%3B identified by sequence similarity gene gene3424 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0818 VCA0819 VCA0819 groES groES 765822 766112 + co-chaperonin GroES 10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring gene gene3425 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0819 VCA0820 VCA0820 groEL groEL 766141 767733 + molecular chaperone GroEL '60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is not essential for growth' gene gene3426 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0820 VCA0821 VCA0821 VCA0821 767766 767972 + hypothetical protein gene gene3427 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0821 VCA0822 VCA0822 VCA0822 768053 769477 - aspartate kinase catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP gene gene3428 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0822 VCA0823 VCA0823 ectC ectC 769474 769890 - L-ectoine synthase 'N-acetyldiaminobutyrate dehydratase%3B catalyzes the formation of the osmoprotectant ecotoine from gamma-N-acetyl-alpha%2Cgamma-diaminobutyric acid' gene gene3429 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0823 VCA0824 VCA0824 VCA0824 769955 771190 - diaminobutyrate--2-oxoglutarate aminotransferase catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde gene gene3430 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0824 VCA0825 VCA0825 VCA0825 771214 771735 - L-2%2C4-diaminobutyric acid acetyltransferase similar to SP:O52249%3B identified by sequence similarity gene gene3431 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0825 VCA0827 VCA0827 phhB phhB 772435 772764 - pterin-4-alpha-carbinolamine dehydratase '4-alpha-hydroxytetrahydrobiopterin dehydratase activity%3B catalyzes the formation of (6R)-6-(L-erythro-1%2C2-dihydroxypropyl)-7%2C8-dihydro-6H-pterin from (6R)-6-(L-erythro-1%2C2-dihydroxypropyl)-5%2C6%2C7%2C8-tetrahydro-4a-hydroxypterin%3B functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction' gene gene3432 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0827 VCA0828 VCA0828 phhA phhA 772754 773548 - phenylalanine 4-monooxygenase phenylalanine 4-hydroxylase%3B phenylalanine 4-hydroxylase%3B catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin gene gene3433 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0828 VCA0829 VCA0829 VCA0829 773782 775731 + acetoacetyl-CoA synthetase AcsA%3B in Sinorhizobium meliloti this enzyme is required for acetoacetate activation%3B similar to acetyl-CoA synthase gene gene3434 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0829 VCA0830 VCA0830 VCA0830 775834 776808 + LysR family transcriptional regulator similar to SP:P10183 PID:150233%3B identified by sequence similarity gene gene3435 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0830 VCA0831 VCA0831 VCA0831 776810 777004 + hypothetical protein gene gene3436 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0831 VCA0832 VCA0832 VCA0832 777308 777940 - methyltransferase similar to SP:P37431 PID:295895%3B identified by sequence similarity gene gene3437 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0832 VCA0833 VCA0833 VCA0833 778082 778960 + LysR family transcriptional regulator similar to GB:AE000657%3B identified by sequence similarity gene gene3438 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0833 VCA0834 VCA0834 VCA0834 779097 780050 + hypothetical protein gene gene3439 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0834 VCA0835 VCA0835 VCA0835 780082 781068 - hypothetical protein gene gene3440 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0835 VCA0836 VCA0836 VCA0836 781106 781684 - hexapeptide repeat-containing acetyltransferase similar to GB:D26185 SP:P37515 GB:L16865 PID:438465 PID:467369%3B identified by sequence similarity gene gene3441 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0836 VCA0837 VCA0837 VCA0837 781822 783135 - hemolysin similar to GB:U14003 SP:P39319 PID:537059 GB:U00096 PID:1790664%3B identified by sequence similarity gene gene3442 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0837 VCA0838 VCA0838 VCA0838 783290 783694 - hypothetical protein gene gene3443 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0838 VCA0840 VCA0840 VCA0840 784587 785072 + deoxycytidylate deaminase similar to SP:P33968 GB:X70289 PID:396216%3B identified by sequence similarity gene gene3444 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0840 VCA0843 VCA0843 VCA0843 785728 787257 + glyceraldehyde-3-phosphate dehydrogenase catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate%3B involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium%3B NAD and NADP dependent gene gene3445 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0843 VCA0845 VCA0845 VCA0845 787558 787782 + hypothetical protein gene gene3446 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0845 VCA0846 VCA0846 VCA0846 787831 788445 - hypothetical protein gene gene3447 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0846 VCA0847 VCA0847 VCA0847 788631 789875 + hypothetical protein uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function gene gene3448 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0847 VCA0848 VCA0848 VCA0848 789918 790898 - diguanylate cyclase similar to PID:576655 PID:576657%3B identified by sequence similarity gene gene3449 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0848 VCA0849 VCA0849 VCA0849 791029 800820 - hypothetical protein gene gene3450 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0849 VCA0850 VCA0850 VCA0850 801121 801906 - response regulator similar to GB:M23230 SP:P26275 PID:151004 PID:1196739%3B identified by sequence similarity gene gene3451 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0850 VCA0851 VCA0851 VCA0851 802066 803145 - hypothetical protein gene gene3452 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0851 VCA0852 VCA0852 VCA0852 803146 804390 - hypothetical protein gene gene3453 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0852 VCA0853 VCA0853 VCA0853 804395 805138 - hypothetical protein gene gene3454 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0853 VCA0854 VCA0854 VCA0854 805131 806390 - hypothetical protein gene gene3455 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0854 VCA0855 VCA0855 VCA0855 806378 807061 - ABC transporter ATP-binding protein similar to GB:AE000782%3B identified by sequence similarity gene gene3456 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0855 VCA0856 VCA0856 VCA0856 807070 807741 - hypothetical protein gene gene3457 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0856 VCA0858 VCA0858 VCA0858 807903 808046 + hypothetical protein gene gene3458 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0858 VCA0859 VCA0859 VCA0859 808054 808977 - aldo/keto reductase similar to GB:U00096 PID:1787936%3B identified by sequence similarity gene gene3459 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0859 VCA0860 VCA0860 malS malS 809269 811341 + alpha-amylase 'periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB%3B hydrolyzes alpha-(1%2C4) glycosidic linkages%3B contains internal disulfide bonds' gene gene3460 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0860 VCA0862 VCA0862 VCA0862 811876 813114 + long-chain fatty acid transport protein similar to GB:M60607 SP:P10384 GB:Y00552 PID:145910 PID:41372%3B identified by sequence similarity gene gene3461 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0862 VCA0863 VCA0863 VCA0863 813130 815520 + lipase similar to GP:3746951%3B identified by sequence similarity gene gene3462 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0863 VCA0864 VCA0864 VCA0864 815998 817278 + methyl-accepting chemotaxis protein similar to GB:L29189 SP:P39214 PID:459690 GB:AL009126%3B identified by sequence similarity gene gene3463 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0864 VCA0865 VCA0865 VCA0865 817359 819188 - hemagglutinin/protease similar to GB:M59466 SP:P24153 PID:155308%3B identified by sequence similarity gene gene3464 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0865 VCA0866 VCA0866 VCA0866 819174 819413 + hypothetical protein gene gene3465 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0866 VCA0867 VCA0867 VCA0867 819609 820262 - outer membrane protein W receptor for colicin S4 gene gene3466 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0867 VCA0868 VCA0868 VCA0868 820464 820739 + gene gene3467 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0868 VCA0870 VCA0870 pbpG pbpG 821216 822166 + D-alanyl-D-alanine endopeptidase specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7 gene gene3468 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0870 VCA0871 VCA0871 VCA0871 822401 823822 + GntR family transcriptional regulator similar to GB:U00096 PID:1742348 PID:1742355 PID:1787710%3B identified by sequence similarity gene gene3469 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0871 VCA0872 VCA0872 VCA0872 823951 825543 + cytochrome d ubiquinol oxidase subunit I similar to GB:J03939 SP:P11026 PID:497637 GB:U00096 PID:1651327%3B identified by sequence similarity gene gene3470 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0872 VCA0873 VCA0873 VCA0873 825556 826692 + cytochrome d ubiquinol oxidase subunit II similar to GB:J03939 SP:P11027 PID:145640 GB:U00096 PID:1651328%3B identified by sequence similarity gene gene3471 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0873 VCA0874 VCA0874 VCA0874 827514 827717 + hypothetical protein gene gene3472 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0874 VCA0875 VCA0875 VCA0875 827934 829259 - D-serine dehydratase catalyzes the formation of pyruvate from serine gene gene3473 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0875 VCA0876 VCA0876 VCA0876 829467 830411 + DNA-binding transcriptional regulator DsdC regulates the synthesis and expression of the dsdXA operon and dadA gene gene gene3474 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0876 VCA0877 VCA0877 VCA0877 830711 831787 + hydrolase similar to PID:882252 SP:P54965%3B identified by sequence similarity gene gene3475 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0877 VCA0878 VCA0878 VCA0878 831895 832056 + integrase-like protein similar to GB:U00096 PID:1787861%3B identified by sequence similarity gene gene3476 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0878 VCA0880 VCA0880 VCA0880 832685 833065 + hypothetical protein gene gene3477 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0880 VCA0881 VCA0881 VCA0881 833090 833485 + hypothetical protein gene gene3478 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0881 VCA0882 VCA0882 VCA0882 833497 834561 + hypothetical protein gene gene3479 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0882 VCA0883 VCA0883 VCA0883 834574 835683 + hypothetical protein gene gene3480 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0883 VCA0884 VCA0884 VCA0884 835734 836795 + hypothetical protein gene gene3481 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0884 VCA0885 VCA0885 tdh tdh 837892 838923 - L-threonine 3-dehydrogenase 'converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism' gene gene3482 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0885 VCA0886 VCA0886 VCA0886 838926 840119 - 2-amino-3-ketobutyrate CoA ligase catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine gene gene3483 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0886 VCA0887 VCA0887 VCA0887 840439 841298 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3484 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0887 VCA0888 VCA0888 VCA0888 841276 842037 + LuxR family transcriptional regulator similar to GB:M98835 SP:Q03316 PID:152430%3B identified by sequence similarity gene gene3485 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0888 VCA0889 VCA0889 VCA0889 842137 843075 + LysR family transcriptional regulator similar to PID:924993 SP:P52689%3B identified by sequence similarity gene gene3486 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0889 VCA0890 VCA0890 VCA0890 843069 843452 + glyoxylase I family protein similar to GB:U00096 PID:1552764 PID:1786385 PID:971393%3B identified by sequence similarity gene gene3487 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0890 VCA0891 VCA0891 VCA0891 843530 844942 - hypothetical protein gene gene3488 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0891 VCA0892 VCA0892 VCA0892 845054 845452 - hypothetical protein gene gene3489 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0892 VCA0893 VCA0893 VCA0893 845558 845941 - hypothetical protein gene gene3490 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0893 VCA0894 VCA0894 VCA0894 846018 846764 - hydrolase gene gene3491 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0894 VCA0895 VCA0895 VCA0895 846932 849877 + chemotactic transducer-like protein similar to PID:1652854%3B identified by sequence similarity gene gene3492 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0895 VCA0896 VCA0896 VCA0896 850221 851726 + glucose-6-phosphate 1-dehydrogenase 'catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate' gene gene3493 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0896 VCA0897 VCA0897 VCA0897 851723 852439 + 6-phosphogluconolactonase 'catalyzes the formation of 6-phospho-D-gluconate from 6-phospho-D-glucono-1%2C5-lactone' gene gene3494 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0897 VCA0898 VCA0898 VCA0898 852453 853901 + 6-phosphogluconate dehydrogenase catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate gene gene3495 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0898 VCA0899 VCA0899 VCA0899 854057 854194 + hypothetical protein gene gene3496 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0899 VCA0900 VCA0900 VCA0900 854462 855376 + hypothetical protein gene gene3497 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0900 VCA0901 VCA0901 VCA0901 855370 855999 + hypothetical protein gene gene3498 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0901 VCA0902 VCA0902 VCA0902 856032 856868 - hypothetical protein gene gene3499 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0902 VCA0903 VCA0903 VCA0903 857004 858137 - hypothetical protein gene gene3500 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0903 VCA0904 VCA0904 VCA0904 858156 859508 - permease similar to GB:J01603 SP:P08555 GB:X86379 PID:145805 PID:784980%3B identified by sequence similarity gene gene3501 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0904 VCA0905 VCA0905 VCA0905 859667 860806 - hypothetical protein gene gene3502 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0905 VCA0906 VCA0906 VCA0906 860947 862683 - methyl-accepting chemotaxis protein similar to SP:P15492 GB:X16945 PID:48362 PID:2190531%3B identified by sequence similarity gene gene3503 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0906 VCA0907 VCA0907 VCA0907 862985 863515 - hypothetical protein gene gene3504 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0907 VCA0908 VCA0908 VCA0908 863540 864043 - hypothetical protein gene gene3505 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0908 VCA0909 VCA0909 VCA0909 864067 865434 - coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III gene gene3506 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0909 VCA0910 VCA0910 VCA0910 865691 866440 + TonB1 protein similar to SP:O52042%3B identified by sequence similarity gene gene3507 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0910 VCA0911 VCA0911 VCA0911 866440 867126 + TonB system transport protein ExbB1 similar to SP:O52043%3B identified by sequence similarity gene gene3508 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0911 VCA0912 VCA0912 VCA0912 867123 867539 + TonB system transport protein ExbD1 similar to SP:O52044%3B identified by sequence similarity gene gene3509 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0912 VCA0913 VCA0913 VCA0913 867550 868383 + hemin ABC transporter substrate-binding protein HutB similar to GP:2738773%3B identified by sequence similarity gene gene3510 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0913 VCA0914 VCA0914 VCA0914 868395 869426 + hemin ABC transporter permease similar to GP:2738774%3B identified by sequence similarity gene gene3511 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0914 VCA0915 VCA0915 hmuV hmuV 869458 870204 + hemin importer ATP-binding protein with HmuTU is involved in the transport of hemin gene gene3512 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0915 VCA0917 VCA0917 VCA0917 870338 870823 - TetR family transcriptional regulator similar to PID:2183255%3B identified by sequence similarity gene gene3513 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0917 VCA0919 VCA0919 VCA0919 871322 871624 + hypothetical protein gene gene3514 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0919 VCA0920 VCA0920 VCA0920 871827 872426 + hypothetical protein gene gene3515 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0920 VCA0921 VCA0921 VCA0921 872487 873605 - hypothetical protein gene gene3516 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0921 VCA0922 VCA0922 VCA0922 873771 874379 + hypothetical protein gene gene3517 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0922 VCA0923 VCA0923 VCA0923 874526 876400 + methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene3518 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0923 VCA0924 VCA0924 VCA0924 876463 878280 - hypothetical protein gene gene3519 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0924 VCA0925 VCA0925 VCA0925 878819 879871 + dihydroorotase catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis gene gene3520 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0925 VCA0926 VCA0926 VCA0926 879934 881031 - AraC family transcriptional regulator similar to GP:2906236%3B identified by sequence similarity gene gene3521 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0926 VCA0927 VCA0927 VCA0927 881142 881492 + hypothetical protein gene gene3522 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0927 VCA0928 VCA0928 VCA0928 881489 881998 + hypothetical protein gene gene3523 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0928 VCA0929 VCA0929 rumB rumB 882048 883175 - 23S rRNA methyluridine methyltransferase RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA gene gene3524 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0929 VCA0930 VCA0930 VCA0930 883289 884224 - hypothetical protein gene gene3525 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0930 VCA0931 VCA0931 VCA0931 884337 885719 - hypothetical protein gene gene3526 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0931 VCA0933 VCA0933 VCA0933 886068 886280 + cold shock domain-contain protein similar to GB:U00096 PID:1651256 PID:1778540 PID:1786841 PID:833769%3B identified by sequence similarity gene gene3527 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0933 VCA0935 VCA0935 VCA0935 886850 887206 + hypothetical protein gene gene3528 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0935 VCA0936 VCA0936 VCA0936 887418 888356 + hypothetical protein gene gene3529 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0936 VCA0937 VCA0937 VCA0937 888345 889136 - AraC family transcriptional regulator similar to GB:U00096 PID:1788091%3B identified by sequence similarity gene gene3530 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0937 VCA0938 VCA0938 VCA0938 889110 890134 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3531 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0938 VCA0939 VCA0939 VCA0939 890253 891218 + sensory box/GGDEF family protein similar to PID:1001780 PID:1001789%3B identified by sequence similarity gene gene3532 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0939 VCA0940 VCA0940 VCA0940 891370 892131 + DeoR family transcriptional regulator similar to SP:P09392 GB:M96795 PID:146186 PID:606358 GB:U00096%3B identified by sequence similarity gene gene3533 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0940 VCA0941 VCA0941 VCA0941 892283 892771 + acyl-CoA thioester hydrolase similar to PID:2398774%3B identified by sequence similarity gene gene3534 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0941 VCA0942 VCA0942 VCA0942 892855 893133 + hypothetical protein gene gene3535 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0942 VCA0943 VCA0943 malG malG 893457 894347 - maltose transporter permease with MalKFE is involved in the transport of maltose into the cell gene gene3536 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0943 VCA0944 VCA0944 malF malF 894359 895933 - maltose transporter membrane protein with MalKGE is involved in maltose transport into the cell gene gene3537 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0944 VCA0945 VCA0945 malE malE 896008 897228 - maltose ABC transporter substrate-binding protein functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis gene gene3538 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0945 VCA0946 VCA0946 VCA0946 897862 898983 + maltose/maltodextrin transporter ATP-binding protein with malEFG is involved in import of maltose/maltodextrin gene gene3539 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0946 VCA0947 VCA0947 VCA0947 899206 899727 + spermidine n1-acetyltransferase similar to GB:D25276 SP:P37354 PID:517105 GB:U00096 PID:1742583%3B identified by sequence similarity gene gene3540 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0947 VCA0948 VCA0948 VCA0948 899732 899977 + hypothetical protein gene gene3541 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0948 VCA0949 VCA0949 VCA0949 900115 900732 - SM-20-like protein similar to GP:469478%3B identified by sequence similarity gene gene3542 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0949 VCA0951 VCA0951 VCA0951 900939 901259 + hypothetical protein gene gene3543 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0951 VCA0952 VCA0952 VCA0952 901426 902100 - LuxR family transcriptional regulator similar to PID:1147562 SP:P52106 GB:U00096 PID:1787277%3B identified by sequence similarity gene gene3544 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0952 VCA0953 VCA0953 VCA0953 902678 902956 - peptidyl-prolyl cis-trans isomerase C similar to SP:P39159 PID:836657 PID:693800 GB:U00096 PID:1790211%3B identified by sequence similarity gene gene3545 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0953 VCA0954 VCA0954 VCA0954 903131 904051 + chemotaxis protein CheV similar to PID:1165186%3B identified by sequence similarity gene gene3546 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0954 VCA0955 VCA0955 VCA0955 904127 904651 - MarR family transcriptional regulator similar to GB:X74409 SP:P42195 PID:396458%3B identified by sequence similarity gene gene3547 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0955 VCA0956 VCA0956 VCA0956 904820 905839 + diguanylate cyclase similar to GB:AE000657%3B identified by sequence similarity gene gene3548 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0956 VCA0957 VCA0957 VCA0957 905958 906566 - malate synthase Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle gene gene3549 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0957 VCA0958 VCA0958 VCA0958 906685 908202 + hypothetical protein gene gene3550 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0958 VCA0960 VCA0960 VCA0960 908482 909855 - diguanylate cyclase similar to PID:1239987 SP:P54595 PID:1336656 GB:AL009126%3B identified by sequence similarity gene gene3551 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0960 VCA0961 VCA0961 VCA0961 910197 910805 + hypothetical protein gene gene3552 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0961 VCA0962 VCA0962 VCA0962 911092 912300 + hypothetical protein gene gene3553 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0962 VCA0963 VCA0963 VCA0963 912325 913248 - hypothetical protein gene gene3554 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0963 VCA0964 VCA0964 VCA0964 913349 914254 + glycine cleavage operon activator similar to GB:L42023 SP:P45099 PID:1007064 PID:1221317 PID:1205437%3B identified by sequence similarity gene gene3555 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0964 VCA0965 VCA0965 VCA0965 914406 915596 + diguanylate cyclase similar to GB:AE000657%3B identified by sequence similarity gene gene3556 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0965 VCA0966 VCA0966 VCA0966 915599 915895 - hypothetical protein gene gene3557 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0966 VCA0969 VCA0969 VCA0969 916070 916918 + pirin similar to GP:1907076%3B identified by sequence similarity gene gene3558 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0969 VCA0970 VCA0970 VCA0970 917056 917370 - hypothetical protein gene gene3559 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0970 VCA0971 VCA0971 VCA0971 917882 918322 + hypothetical protein gene gene3560 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0971 VCA0972 VCA0972 VCA0972 918331 919635 - hypothetical protein gene gene3561 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0972 VCA0973 VCA0973 VCA0973 919692 919865 + hypothetical protein gene gene3562 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0973 VCA0974 VCA0974 VCA0974 919898 921583 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene3563 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0974 VCA0975 VCA0975 VCA0975 921798 924158 - ATP-dependent protease LA-like protein similar to GB:AE000520%3B identified by sequence similarity gene gene3564 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0975 VCA0976 VCA0976 VCA0976 924362 924856 + hypothetical protein gene gene3565 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0976 VCA0977 VCA0977 VCA0977 924885 926504 + ABC transporter ATP-binding protein similar to SP:P33916 PID:405909 GB:U00096 PID:1736845 PID:1788506%3B identified by sequence similarity gene gene3566 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0977 VCA0978 VCA0978 VCA0978 926671 927402 - amino acid ABC transporter substrate-binding protein similar to GB:J01805 SP:P02910 GB:V01372 GB:V01373 GB:X52093%3B identified by sequence similarity gene gene3567 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0978 VCA0979 VCA0979 VCA0979 927422 928970 - gene gene3568 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0979 VCA0981 VCA0981 VCA0981 929101 929844 - hypothetical protein gene gene3569 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0981 VCA0982 VCA0982 VCA0982 929998 930897 - LysR family transcriptional regulator similar to PID:1652750%3B identified by sequence similarity gene gene3570 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0982 VCA0983 VCA0983 VCA0983 931049 932797 + L-lactate permease similar to GB:AE000782%3B identified by sequence similarity gene gene3571 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0983 VCA0984 VCA0984 lldD lldD 932920 934056 + L-lactate dehydrogenase flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration gene gene3572 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0984 VCA0985 VCA0985 VCA0985 934154 937033 + oxidoreductase/iron-sulfur cluster-binding protein similar to GB:AE000511 PID:2314381%3B identified by sequence similarity gene gene3573 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0985 VCA0986 VCA0986 VCA0986 937117 937950 - hypothetical protein gene gene3574 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0986 VCA0987 VCA0987 VCA0987 938085 940496 + phosphoenolpyruvate synthase catalyzes the formation of phosphoenolpyruvate from pyruvate gene gene3575 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0987 VCA0988 VCA0988 VCA0988 940679 942235 + methyl-accepting chemotaxis protein similar to GB:X61367 PID:48195%3B identified by sequence similarity gene gene3576 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0988 VCA0989 VCA0989 VCA0989 942593 943927 + hypothetical protein gene gene3577 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0989 VCA0990 VCA0990 VCA0990 944006 945292 - DEAD/DEAH box helicase similar to GB:L02123 SP:P25888 PID:560801 GB:U00096 PID:1651360%3B identified by sequence similarity gene gene3578 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0990 VCA0991 VCA0991 VCA0991 945384 946310 - LysR family transcriptional regulator similar to PID:1652912%3B identified by sequence similarity gene gene3579 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0991 VCA0992 VCA0992 VCA0992 946431 947087 + glutaredoxin cofactor involved in the reduction of disulfides gene gene3580 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0992 VCA0993 VCA0993 VCA0993 947097 948200 + N-ethylmaleimide reductase similar to GB:U00096 SP:P77258 PID:1711244 PID:1787939%3B identified by sequence similarity gene gene3581 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0993 VCA0994 VCA0994 VCA0994 948321 949301 - hypothetical protein gene gene3582 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0994 VCA0996 VCA0996 VCA0996 949658 951517 + ABC transporter ATP-binding protein similar to GB:L42023 PID:1006302 PID:1221167 PID:1205301 SP:Q57180%3B identified by sequence similarity gene gene3583 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0996 VCA0997 VCA0997 VCA0997 951648 952373 + hypothetical protein gene gene3584 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0997 VCA0998 VCA0998 VCA0998 952463 953506 - Oye family NADH-dependent flavin oxidoreductase similar to PID:1655954%3B identified by sequence similarity gene gene3585 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0998 VCA0999 VCA0999 VCA0999 953656 954231 + TetR family transcriptional regulator similar to GB:U00096 PID:1787354%3B identified by sequence similarity gene gene3586 http://www.ncbi.nlm.nih.gov/gene/?term=VCA0999 VCA1000 VCA1000 VCA1000 954303 954932 - hypothetical protein gene gene3587 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1000 VCA1001 VCA1001 VCA1001 955133 955966 + AraC family transcriptional regulator similar to GP:3294250%3B identified by sequence similarity gene gene3588 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1001 VCA1002 VCA1002 VCA1002 956118 956837 + AzlC family protein similar to GB:U00096 PID:1789038%3B identified by sequence similarity gene gene3589 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1002 VCA1003 VCA1003 VCA1003 956834 957151 + hypothetical protein gene gene3590 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1003 VCA1004 VCA1004 VCA1004 957203 957817 - hypothetical protein gene gene3591 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1004 VCA1005 VCA1005 VCA1005 957933 958391 - MarR family transcriptional regulator similar to GB:AL009126%3B identified by sequence similarity gene gene3592 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1005 VCA1006 VCA1006 VCA1006 958488 958925 + organic hydroperoxide resistance protein similar to GP:3098342%3B identified by sequence similarity gene gene3593 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1006 VCA1008 VCA1008 VCA1008 959181 960176 + outer membrane protein similar to PID:1658032%3B identified by sequence similarity gene gene3594 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1008 VCA1010 VCA1010 VCA1010 960337 961233 + hypothetical protein gene gene3595 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1010 VCA1011 VCA1011 VCA1011 961260 961898 + glutaredoxin-like protein similar to SP:P37687 PID:466748 GB:U00096 PID:1790039%3B identified by sequence similarity gene gene3596 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1011 VCA1012 VCA1012 VCA1012 962112 962579 - hypothetical protein gene gene3597 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1012 VCA1013 VCA1013 VCA1013 962576 963307 - hypothetical protein gene gene3598 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1013 VCA1015 VCA1015 VCA1015 963699 965132 + Na+/H+ antiporter similar to GP:3123728%3B identified by sequence similarity gene gene3599 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1015 VCA1016 VCA1016 VCA1016 965198 965599 - hypothetical protein gene gene3600 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1016 VCA1017 VCA1017 VCA1017 965610 966083 - methylated DNA-protein cysteine methyltransferase similar to GB:U00014 PID:466930 SP:P52982%3B identified by sequence similarity gene gene3601 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1017 VCA1018 VCA1018 VCA1018 966084 967442 - ada regulatory protein similar to SP:Q10630 PID:1340083 PID:1513196 GB:AL123456%3B identified by sequence similarity gene gene3602 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1018 VCA1019 VCA1019 VCA1019 967698 968144 + hypothetical protein gene gene3603 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1019 VCA1020 VCA1020 VCA1020 968221 969141 - LysR family transcriptional regulator similar to PID:1684731%3B identified by sequence similarity gene gene3604 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1020 VCA1021 VCA1021 VCA1021 969256 969615 + hypothetical protein gene gene3605 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1021 VCA1022 VCA1022 VCA1022 969661 969885 + hypothetical protein gene gene3606 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1022 VCA1023 VCA1023 VCA1023 969825 971684 + hypothetical protein gene gene3607 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1023 VCA1024 VCA1024 VCA1024 971811 972062 - hypothetical protein gene gene3608 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1024 VCA1025 VCA1025 nagB nagB 972427 973227 + glucosamine-6-phosphate deaminase catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate gene gene3609 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1025 VCA1026 VCA1026 VCA1026 973358 974515 - hypothetical protein gene gene3610 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1026 VCA1027 VCA1027 VCA1027 974668 975504 - maltose operon periplasmic protein similar to SP:P03841 GB:J01648 GB:M26131 GB:X04477 PID:146595%3B identified by sequence similarity gene gene3611 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1027 VCA1028 VCA1028 lamB lamB 975709 976959 - maltoporin porin involved in the transport of maltose and maltodextrins gene gene3612 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1028 VCA1029 VCA1029 VCA1029 977379 979349 + glycogen operon protein GlgX similar to SP:Q10767 PID:1403478 GB:AL123456%3B identified by sequence similarity gene gene3613 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1029 VCA1030 VCA1030 VCA1030 979484 979735 + hypothetical protein gene gene3614 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1030 VCA1031 VCA1031 VCA1031 980195 981827 + This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3615 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1031 VCA1032 VCA1032 VCA1032 981942 982349 - hypothetical protein gene gene3616 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1032 VCA1033 VCA1033 VCA1033 982617 983993 - extracellular solute-binding protein similar to GB:M77351 SP:Q00749 PID:153737%3B identified by sequence similarity gene gene3617 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1033 VCA1034 VCA1034 VCA1034 984002 986002 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene3618 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1034 VCA1035 VCA1035 VCA1035 986185 986433 + hypothetical protein gene gene3619 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1035 VCA1036 VCA1036 VCA1036 986424 987695 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3620 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1036 VCA1037 VCA1037 VCA1037 987883 988602 + amino acid ABC transporter ATP-binding protein similar to PID:1051225 PID:1655715%3B identified by sequence similarity gene gene3621 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1037 VCA1038 VCA1038 VCA1038 988599 989399 + amino acid ABC transporter permease similar to GB:AE000782%3B identified by sequence similarity gene gene3622 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1038 VCA1039 VCA1039 VCA1039 989435 990271 + amino acid ABC transporter substrate-binding protein similar to GB:U00096 SP:P39174 PID:1736579 PID:1736587 PID:1788228%3B identified by sequence similarity gene gene3623 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1039 VCA1040 VCA1040 VCA1040 990272 991168 + amino acid ABC transporter permease similar to GB:AE000782%3B identified by sequence similarity gene gene3624 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1040 VCA1041 VCA1041 VCA1041 991281 992984 + phosphomannomutase similar to GB:AE000520%3B identified by sequence similarity gene gene3625 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1041 VCA1042 VCA1042 VCA1042 993043 993444 - Ccm2-like protein similar to GB:AE000511 PID:2314731%3B identified by sequence similarity gene gene3626 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1042 VCA1043 VCA1043 VCA1043 993354 994298 - TagE protein similar to GB:AE000511 PID:2314724%3B identified by sequence similarity gene gene3627 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1043 VCA1044 VCA1044 VCA1044 994599 994742 + hypothetical protein gene gene3628 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1044 VCA1045 VCA1045 VCA1045 994881 996830 + PTS system mannitol-specific transporter subunit IIABC similar to SP:P00550 GB:V01503 PID:42034 PID:466737 GB:U00096%3B identified by sequence similarity gene gene3629 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1045 VCA1046 VCA1046 VCA1046 996931 998085 + mannitol-1-phosphate 5-dehydrogenase similar to SP:P09424 GB:X51359 PID:42039 PID:466738 GB:U00096%3B identified by sequence similarity gene gene3630 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1046 VCA1047 VCA1047 mtlR mtlR 998134 998715 + mannitol repressor protein Acts as a repressor of the mtlAD operon gene gene3631 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1047 VCA1048 VCA1048 VCA1048 998829 999764 + Gfo/Idh/MocA family oxidoreductase similar to GB:U00096 SP:P75931 PID:1787307%3B identified by sequence similarity gene gene3632 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1048 VCA1049 VCA1049 VCA1049 999865 1000743 - hypothetical protein gene gene3633 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1049 VCA1050 VCA1050 VCA1050 1000877 1001800 + hypothetical protein gene gene3634 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1050 VCA1051 VCA1051 VCA1051 1001797 1002228 - hypothetical protein gene gene3635 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1051 VCA1052 VCA1052 VCA1052 1002304 1003026 - hypothetical protein gene gene3636 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1052 VCA1053 VCA1053 VCA1053 1003208 1003603 - hypothetical protein gene gene3637 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1053 VCA1054 VCA1054 VCA1054 1003730 1004368 - hypothetical protein gene gene3638 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1054 VCA1055 VCA1055 VCA1055 1004468 1005391 + LysR family transcriptional regulator similar to PID:1652750%3B identified by sequence similarity gene gene3639 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1055 VCA1056 VCA1056 VCA1056 1005434 1007746 - methyl-accepting chemotaxis protein similar to GB:X61367 PID:48195%3B identified by sequence similarity gene gene3640 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1056 VCA1057 VCA1057 VCA1057 1008136 1008855 - short chain dehydrogenase/reductase oxidoreductase similar to PID:1001780 PID:1001805%3B identified by sequence similarity gene gene3641 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1057 VCA1058 VCA1058 VCA1058 1009003 1009908 + LysR family transcriptional regulator similar to PID:1493807%3B identified by sequence similarity gene gene3642 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1058 VCA1059 VCA1059 VCA1059 1010002 1010619 + hypothetical protein gene gene3643 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1059 VCA1060 VCA1060 ribB ribB 1010684 1011340 - 3%2C4-dihydroxy-2-butanone 4-phosphate synthase DHBP synthase%3B functions during riboflavin biosynthesis gene gene3644 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1060 VCA1062 VCA1062 potE potE 1011799 1013118 - putrescine transporter 'catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system' gene gene3645 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1062 VCA1063 VCA1063 VCA1063 1013186 1015348 - ornithine decarboxylase similar to GB:M64495 SP:P24169 PID:147331 GB:U00096 PID:1651300%3B identified by sequence similarity gene gene3646 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1063 VCA1066 VCA1066 VCA1066 1016102 1016341 - hypothetical protein gene gene3647 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1066 VCA1067 VCA1067 VCA1067 1016331 1017773 - aldehyde dehydrogenase similar to SP:P12693 PID:49082%3B identified by sequence similarity gene gene3648 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1067 VCA1068 VCA1068 VCA1068 1017946 1018428 - AsnC family transcriptional regulator similar to PID:1816639%3B identified by sequence similarity gene gene3649 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1068 VCA1069 VCA1069 VCA1069 1018626 1020545 - methyl-accepting chemotaxis protein similar to PID:1255679%3B identified by sequence similarity gene gene3650 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1069 VCA1070 VCA1070 VCA1070 1020875 1021096 - hypothetical protein gene gene3651 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1070 VCA1071 VCA1071 VCA1071 1021280 1022770 - sodium/proline symporter similar to SP:P07117 GB:L01132 GB:L01133 GB:L01150 GB:L01151%3B identified by sequence similarity gene gene3652 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1071 VCA1072 VCA1072 VCA1072 1022843 1023541 - hypothetical protein gene gene3653 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1072 VCA1073 VCA1073 VCA1073 1023563 1026682 - bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase gene gene3654 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1073 VCA1074 VCA1074 VCA1074 1027022 1027885 - AraC family transcriptional regulator similar to PID:1185446 SP:Q51872%3B identified by sequence similarity gene gene3655 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1074 VCA1075 VCA1075 VCA1075 1028244 1029383 + hypothetical protein gene gene3656 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1075 VCA1077 VCA1077 VCA1077 1029543 1031360 + hypothetical protein gene gene3657 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1077 VCA1078 VCA1078 VCA1078 1031679 1032419 + LuxR family transcriptional regulator similar to PID:887806 GB:U00096 SP:Q46791 PID:1789219%3B identified by sequence similarity gene gene3658 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1078 VCA1079 VCA1079 VCA1079 1032448 1033083 - pyridoxamine 5'-phosphate oxidase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate gene gene3659 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1079 VCA1080 VCA1080 VCA1080 1033253 1034698 + HlyD family secretion protein similar to GP:1314576%3B identified by sequence similarity gene gene3660 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1080 VCA1081 VCA1081 VCA1081 1034707 1035369 + hypothetical protein gene gene3661 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1081 VCA1082 VCA1082 VCA1082 1035375 1037284 + gene gene3662 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1082 VCA1084 VCA1084 VCA1084 1037299 1039413 + toxin secretion ATP-binding protein similar to GB:L12145 GB:X68815 GB:X80055 SP:Q04473 PID:38959%3B identified by sequence similarity gene gene3663 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1084 VCA1085 VCA1085 VCA1085 1039548 1041218 - hypothetical protein gene gene3664 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1085 VCA1086 VCA1086 VCA1086 1041477 1043183 - response regulator similar to PID:1653310%3B identified by sequence similarity gene gene3665 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1086 VCA1087 VCA1087 VCA1087 1043207 1043506 - anti-sigma F factor antagonist similar to PID:1552542%3B identified by sequence similarity gene gene3666 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1087 VCA1088 VCA1088 VCA1088 1043516 1044670 - methyl-accepting chemotaxis protein similar to GB:Pyro_h%3B identified by sequence similarity gene gene3667 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1088 VCA1089 VCA1089 VCA1089 1044713 1045752 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3668 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1089 VCA1090 VCA1090 VCA1090 1045749 1046450 - chemoreceptor glutamine deamidase CheD catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors gene gene3669 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1090 VCA1091 VCA1091 VCA1091 1046389 1047219 - chemotaxis protein CheR similar to GB:M13463 SP:P07364 PID:145523 GB:U00096 PID:1736537%3B identified by sequence similarity gene gene3670 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1091 VCA1092 VCA1092 VCA1092 1047234 1049270 - methyl-accepting chemotaxis protein similar to SP:P02942 GB:J01718 GB:V00373 PID:148077 PID:537197%3B identified by sequence similarity gene gene3671 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1092 VCA1093 VCA1093 VCA1093 1049284 1049745 - purine-binding chemotaxis protein CheW similar to GB:M13462 SP:P07365 PID:145520 GB:U00096 PID:1736540%3B identified by sequence similarity gene gene3672 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1093 VCA1094 VCA1094 VCA1094 1049742 1050269 - purine-binding chemotaxis protein CheW similar to GB:M13462 SP:P07365 PID:145520 GB:U00096 PID:1736540%3B identified by sequence similarity gene gene3673 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1094 VCA1095 VCA1095 VCA1095 1050278 1052440 - chemotaxis protein CheA similar to GB:M34669 SP:P07363 PID:145529 PID:145530 GB:U00096%3B identified by sequence similarity gene gene3674 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1095 VCA1096 VCA1096 VCA1096 1052489 1052866 - chemotaxis protein CheY similar to GB:U13166 PID:534836%3B identified by sequence similarity gene gene3675 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1096 VCA1097 VCA1097 VCA1097 1052859 1053164 - hypothetical protein gene gene3676 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1097 VCA1098 VCA1098 VCA1098 1053362 1054927 + ABC transporter substrate-binding protein similar to SP:P33590 GB:X73143 PID:404845 PID:466612 GB:U00096%3B identified by sequence similarity gene gene3677 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1098 VCA1099 VCA1099 VCA1099 1054920 1055876 + ABC transporter permease similar to SP:P33591 GB:X73143 PID:404846 PID:466613 GB:U00096%3B identified by sequence similarity gene gene3678 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1099 VCA1100 VCA1100 VCA1100 1055857 1056669 + ABC transporter permease similar to SP:P37315 PID:349227 PID:466681 GB:U00096 PID:1789964%3B identified by sequence similarity gene gene3679 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1100 VCA1101 VCA1101 VCA1101 1056588 1058048 + ABC transporter ATP-binding protein similar to SP:P33916 PID:405909 GB:U00096 PID:1736845 PID:1788506%3B identified by sequence similarity gene gene3680 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1101 VCA1102 VCA1102 VCA1102 1058303 1059955 + hypothetical protein gene gene3681 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1102 VCA1104 VCA1104 VCA1104 1060107 1061520 - This region contains an authentic frame shift and is not the result of a sequencing artifact. gene gene3682 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1104 VCA1105 VCA1105 VCA1105 1061510 1062166 - DNA-binding response regulator similar to PID:882555 SP:P52076 GB:U00096 PID:1789402%3B identified by sequence similarity gene gene3683 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1105 VCA1106 VCA1106 VCA1106 1062171 1062802 - gene gene3684 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1106 VCA1108 VCA1108 VCA1108 1062830 1063627 - short chain dehydrogenase similar to GB:M84991 SP:P25716 PID:145881 PID:145888 GB:U00096%3B identified by sequence similarity gene gene3685 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1108 VCA1109 VCA1109 VCA1109 1063637 1064347 - hypothetical protein gene gene3686 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1109 VCA1110 VCA1110 VCA1110 1064363 1065886 - long-chain-fatty-acid--CoA ligase similar to GP:3293047%3B identified by sequence similarity gene gene3687 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1110 VCA1111 VCA1111 VCA1111 1065897 1066499 - thermostable hemolysin similar to GP:3293046%3B identified by sequence similarity gene gene3688 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1111 VCA1112 VCA1112 VCA1112 1066673 1068799 - hypothetical protein gene gene3689 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1112 VCA1113 VCA1113 VCA1113 1068927 1069958 + spermidine/putrescine ABC transporter substrate-binding protein similar to GB:L42023 SP:P44731 PID:1003880 PID:1222429 PID:1204749%3B identified by sequence similarity gene gene3690 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1113 VCA1114 VCA1114 VCA1114 1070018 1070989 - ParB family protein similar to SP:P08867 GB:M12987 GB:X04619 PID:148592 PID:42432%3B identified by sequence similarity gene gene3691 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1114 VCA1115 VCA1115 VCA1115 1070997 1072220 - ParA family protein similar to PID:215654%3B identified by sequence similarity gene gene3692 http://www.ncbi.nlm.nih.gov/gene/?term=VCA1115 VCAt1 VCAt1 tRNA-Gly-8 tRNA-Gly-8 494884 494958 + tRNA-Gly tRNA gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=VCAt1 VCAt2 VCAt2 tRNA-Cys-2 tRNA-Cys-2 699563 699636 - tRNA-Cys tRNA gene3365 http://www.ncbi.nlm.nih.gov/gene/?term=VCAt2 VCAt3 VCAt3 tRNA-Leu-12 tRNA-Leu-12 699661 699747 - tRNA-Leu tRNA gene3366 http://www.ncbi.nlm.nih.gov/gene/?term=VCAt3 VCAt4 VCAt4 tRNA-Cys-3 tRNA-Cys-3 704783 704856 - tRNA-Cys tRNA gene3373 http://www.ncbi.nlm.nih.gov/gene/?term=VCAt4 VCr001 VCr001 16Sa 16Sa 53823 55357 + 16S ribosomal RNA rRNA gene57 http://www.ncbi.nlm.nih.gov/gene/?term=VCr001 VCr002 VCr002 23Sa 23Sa 55784 58670 + 23S ribosomal RNA rRNA gene59 http://www.ncbi.nlm.nih.gov/gene/?term=VCr002 VCr003 VCr003 5Sa 5Sa 58798 58915 + 5S ribosomal RNA rRNA gene60 http://www.ncbi.nlm.nih.gov/gene/?term=VCr003 VCr004 VCr004 16Sb 16Sb 151059 152593 + 16S ribosomal RNA rRNA gene154 http://www.ncbi.nlm.nih.gov/gene/?term=VCr004 VCr005 VCr005 23Sb 23Sb 153026 155912 + 23S ribosomal RNA rRNA gene156 http://www.ncbi.nlm.nih.gov/gene/?term=VCr005 VCr006 VCr006 5Sb 5Sb 156041 156158 + 5S ribosomal RNA rRNA gene157 http://www.ncbi.nlm.nih.gov/gene/?term=VCr006 VCr007 VCr007 16Sc 16Sc 324147 325681 + 16S ribosomal RNA rRNA gene306 http://www.ncbi.nlm.nih.gov/gene/?term=VCr007 VCr008 VCr008 23Sc 23Sc 326193 329079 + 23S ribosomal RNA rRNA gene309 http://www.ncbi.nlm.nih.gov/gene/?term=VCr008 VCr009 VCr009 5Sc 5Sc 329207 329324 + 5S ribosomal RNA rRNA gene310 http://www.ncbi.nlm.nih.gov/gene/?term=VCr009 VCr010 VCr010 16Sd 16Sd 401751 403286 + 16S ribosomal RNA rRNA gene393 http://www.ncbi.nlm.nih.gov/gene/?term=VCr010 VCr011 VCr011 23Sd 23Sd 403799 406685 + 23S ribosomal RNA rRNA gene396 http://www.ncbi.nlm.nih.gov/gene/?term=VCr011 VCr012 VCr012 5Sd 5Sd 406813 406930 + 5S ribosomal RNA rRNA gene397 http://www.ncbi.nlm.nih.gov/gene/?term=VCr012 VCr013 VCr013 16Se 16Se 762775 764309 + 16S ribosomal RNA rRNA gene723 http://www.ncbi.nlm.nih.gov/gene/?term=VCr013 VCr014 VCr014 23Se 23Se 764742 767627 + 23S ribosomal RNA rRNA gene725 http://www.ncbi.nlm.nih.gov/gene/?term=VCr014 VCr015 VCr015 5Se 5Se 767755 767872 + 5S ribosomal RNA rRNA gene726 http://www.ncbi.nlm.nih.gov/gene/?term=VCr015 VCr016 VCr016 5Sf 5Sf 2676241 2676358 - 5S ribosomal RNA rRNA gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=VCr016 VCr017 VCr017 23Sf 23Sf 2676486 2679372 - 23S ribosomal RNA rRNA gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=VCr017 VCr018 VCr018 16Sf 16Sf 2679884 2681418 - 16S ribosomal RNA rRNA gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=VCr018 VCr019 VCr019 5Sg 5Sg 2927898 2928015 - 5S ribosomal RNA rRNA gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=VCr019 VCr020 VCr020 23Sg 23Sg 2928143 2931031 - 23S ribosomal RNA rRNA gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=VCr020 VCr021 VCr021 16Sg 16Sg 2931745 2933279 - 16S ribosomal RNA rRNA gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=VCr021 VCr022 VCr022 5Sh 5Sh 2933646 2933763 - 5S ribosomal RNA rRNA gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=VCr022 VCr023 VCr023 23Sh 23Sh 2933891 2936778 - 23S ribosomal RNA rRNA gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=VCr023 VCr024 VCr024 16Sh 16Sh 2937466 2939001 - 16S ribosomal RNA rRNA gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=VCr024 VCr025 VCr025 VCr025 2675957 2676080 - 5S ribosomal RNA rRNA gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=VCr025 VCt001 VCt001 tRNA-Ala-5 tRNA-Ala-5 55421 55496 + tRNA-Ala tRNA gene58 http://www.ncbi.nlm.nih.gov/gene/?term=VCt001 VCt002 VCt002 tRNA-Asp-4 tRNA-Asp-4 58941 59017 + tRNA-Asp tRNA gene61 http://www.ncbi.nlm.nih.gov/gene/?term=VCt002 VCt003 VCt003 tRNA-Trp-1 tRNA-Trp-1 59047 59123 + tRNA-Trp tRNA gene62 http://www.ncbi.nlm.nih.gov/gene/?term=VCt003 VCt004 VCt004 tRNA-Glu-1 tRNA-Glu-1 152663 152738 + tRNA-Glu tRNA gene155 http://www.ncbi.nlm.nih.gov/gene/?term=VCt004 VCt005 VCt005 tRNA-Ser-1 tRNA-Ser-1 156206 156296 + tRNA-Ser tRNA gene158 http://www.ncbi.nlm.nih.gov/gene/?term=VCt005 VCt006 VCt006 tRNA-Arg-1 tRNA-Arg-1 167187 167263 + tRNA-Arg tRNA gene167 http://www.ncbi.nlm.nih.gov/gene/?term=VCt006 VCt007 VCt007 tRNA-His-1 tRNA-His-1 167299 167374 + tRNA-His tRNA gene168 http://www.ncbi.nlm.nih.gov/gene/?term=VCt007 VCt008 VCt008 tRNA-Pro-1 tRNA-Pro-1 167436 167512 + tRNA-Pro tRNA gene169 http://www.ncbi.nlm.nih.gov/gene/?term=VCt008 VCt009 VCt009 tRNA-His-2 tRNA-His-2 167583 167658 + tRNA-His tRNA gene170 http://www.ncbi.nlm.nih.gov/gene/?term=VCt009 VCt010 VCt010 tRNA-Pro-2 tRNA-Pro-2 167720 167796 + tRNA-Pro tRNA gene171 http://www.ncbi.nlm.nih.gov/gene/?term=VCt010 VCt011 VCt011 tRNA-Ile-2 tRNA-Ile-2 325745 325821 + tRNA-Ile tRNA gene307 http://www.ncbi.nlm.nih.gov/gene/?term=VCt011 VCt012 VCt012 tRNA-Ala-3 tRNA-Ala-3 325830 325905 + tRNA-Ala tRNA gene308 http://www.ncbi.nlm.nih.gov/gene/?term=VCt012 VCt013 VCt013 tRNA-Asp-2 tRNA-Asp-2 329350 329426 + tRNA-Asp tRNA gene311 http://www.ncbi.nlm.nih.gov/gene/?term=VCt013 VCt014 VCt014 tRNA-Thr-2 tRNA-Thr-2 334819 334894 + tRNA-Thr tRNA gene317 http://www.ncbi.nlm.nih.gov/gene/?term=VCt014 VCt015 VCt015 tRNA-Tyr-1 tRNA-Tyr-1 334930 335014 + tRNA-Tyr tRNA gene318 http://www.ncbi.nlm.nih.gov/gene/?term=VCt015 VCt016 VCt016 tRNA-Gly-3 tRNA-Gly-3 335050 335124 + tRNA-Gly tRNA gene319 http://www.ncbi.nlm.nih.gov/gene/?term=VCt016 VCt017 VCt017 tRNA-Thr-3 tRNA-Thr-3 335138 335213 + tRNA-Thr tRNA gene320 http://www.ncbi.nlm.nih.gov/gene/?term=VCt017 VCt018 VCt018 tRNA-Gly-4 tRNA-Gly-4 361861 361936 + tRNA-Gly tRNA gene342 http://www.ncbi.nlm.nih.gov/gene/?term=VCt018 VCt019 VCt019 tRNA-Gly-5 tRNA-Gly-5 361971 362046 + tRNA-Gly tRNA gene343 http://www.ncbi.nlm.nih.gov/gene/?term=VCt019 VCt020 VCt020 tRNA-Gly-6 tRNA-Gly-6 362203 362278 + tRNA-Gly tRNA gene344 http://www.ncbi.nlm.nih.gov/gene/?term=VCt020 VCt021 VCt021 tRNA-Met-4 tRNA-Met-4 362318 362394 + tRNA-Met tRNA gene345 http://www.ncbi.nlm.nih.gov/gene/?term=VCt021 VCt022 VCt022 tRNA-Gly-7 tRNA-Gly-7 362429 362504 + tRNA-Gly tRNA gene346 http://www.ncbi.nlm.nih.gov/gene/?term=VCt022 VCt023 VCt023 tRNA-Met-5 tRNA-Met-5 362691 362767 + tRNA-Met tRNA gene347 http://www.ncbi.nlm.nih.gov/gene/?term=VCt023 VCt024 VCt024 tRNA-Met-6 tRNA-Met-6 362810 362886 + tRNA-Met tRNA gene348 http://www.ncbi.nlm.nih.gov/gene/?term=VCt024 VCt025 VCt025 tRNA-Met-7 tRNA-Met-7 362929 363005 + tRNA-Met tRNA gene349 http://www.ncbi.nlm.nih.gov/gene/?term=VCt025 VCt026 VCt026 tRNA-Ile-3 tRNA-Ile-3 403350 403426 + tRNA-Ile tRNA gene394 http://www.ncbi.nlm.nih.gov/gene/?term=VCt026 VCt027 VCt027 tRNA-Ala-4 tRNA-Ala-4 403435 403511 + tRNA-Ala tRNA gene395 http://www.ncbi.nlm.nih.gov/gene/?term=VCt027 VCt028 VCt028 tRNA-Asp-3 tRNA-Asp-3 406956 407032 + tRNA-Asp tRNA gene398 http://www.ncbi.nlm.nih.gov/gene/?term=VCt028 VCt029 VCt029 tRNA-Asn-2 tRNA-Asn-2 478401 478476 - tRNA-Asn tRNA gene457 http://www.ncbi.nlm.nih.gov/gene/?term=VCt029 VCt030 VCt030 tRNA-Thr-4 tRNA-Thr-4 478491 478566 - tRNA-Thr tRNA gene458 http://www.ncbi.nlm.nih.gov/gene/?term=VCt030 VCt031 VCt031 tRNA-Asn-3 tRNA-Asn-3 478595 478670 - tRNA-Asn tRNA gene459 http://www.ncbi.nlm.nih.gov/gene/?term=VCt031 VCt032 VCt032 tRNA-Thr-5 tRNA-Thr-5 478686 478761 - tRNA-Thr tRNA gene460 http://www.ncbi.nlm.nih.gov/gene/?term=VCt032 VCt033 VCt033 tRNA-Phe-1 tRNA-Phe-1 478803 478878 - tRNA-Phe tRNA gene461 http://www.ncbi.nlm.nih.gov/gene/?term=VCt033 VCt034 VCt034 tRNA-Asn-4 tRNA-Asn-4 481175 481250 - tRNA-Asn tRNA gene463 http://www.ncbi.nlm.nih.gov/gene/?term=VCt034 VCt035 VCt035 tRNA-Phe-2 tRNA-Phe-2 481288 481363 - tRNA-Phe tRNA gene464 http://www.ncbi.nlm.nih.gov/gene/?term=VCt035 VCt036 VCt036 tRNA-Thr-6 tRNA-Thr-6 481374 481449 - tRNA-Thr tRNA gene465 http://www.ncbi.nlm.nih.gov/gene/?term=VCt036 VCt037 VCt037 tRNA-Phe-3 tRNA-Phe-3 481498 481573 - tRNA-Phe tRNA gene466 http://www.ncbi.nlm.nih.gov/gene/?term=VCt037 VCt038 VCt038 tRNA-Met-8 tRNA-Met-8 550187 550262 - tRNA-Met tRNA gene532 http://www.ncbi.nlm.nih.gov/gene/?term=VCt038 VCt039 VCt039 tRNA-Ser-4 tRNA-Ser-4 580968 581060 + tRNA-Ser tRNA gene563 http://www.ncbi.nlm.nih.gov/gene/?term=VCt039 VCt040 VCt040 tRNA-Arg-3 tRNA-Arg-3 581094 581170 + tRNA-Arg tRNA gene564 http://www.ncbi.nlm.nih.gov/gene/?term=VCt040 VCt041 VCt041 tRNA-Ser-5 tRNA-Ser-5 581193 581285 + tRNA-Ser tRNA gene565 http://www.ncbi.nlm.nih.gov/gene/?term=VCt041 VCt042 VCt042 tRNA-Arg-4 tRNA-Arg-4 581352 581428 + tRNA-Arg tRNA gene566 http://www.ncbi.nlm.nih.gov/gene/?term=VCt042 VCt043 VCt043 tRNA-Arg-5 tRNA-Arg-5 581484 581560 + tRNA-Arg tRNA gene567 http://www.ncbi.nlm.nih.gov/gene/?term=VCt043 VCt044 VCt044 tRNA-Arg-6 tRNA-Arg-6 581633 581709 + tRNA-Arg tRNA gene568 http://www.ncbi.nlm.nih.gov/gene/?term=VCt044 VCt045 VCt045 tRNA-Arg-7 tRNA-Arg-7 581766 581842 + tRNA-Arg tRNA gene569 http://www.ncbi.nlm.nih.gov/gene/?term=VCt045 VCt046 VCt046 tRNA-Arg-8 tRNA-Arg-8 581914 581990 + tRNA-Arg tRNA gene570 http://www.ncbi.nlm.nih.gov/gene/?term=VCt046 VCt047 VCt047 tRNA-Leu-11 tRNA-Leu-11 682928 683011 + tRNA-Leu tRNA gene654 http://www.ncbi.nlm.nih.gov/gene/?term=VCt047 VCt048 VCt048 tRNA-Met-9 tRNA-Met-9 683065 683141 + tRNA-Met tRNA gene655 http://www.ncbi.nlm.nih.gov/gene/?term=VCt048 VCt049 VCt049 tRNA-Glu-4 tRNA-Glu-4 764379 764454 + tRNA-Glu tRNA gene724 http://www.ncbi.nlm.nih.gov/gene/?term=VCt049 VCt050 VCt050 tRNA-Asp-5 tRNA-Asp-5 767948 768024 + tRNA-Asp tRNA gene727 http://www.ncbi.nlm.nih.gov/gene/?term=VCt050 VCt051 VCt051 tRNA-Tyr-2 tRNA-Tyr-2 973171 973255 - tRNA-Tyr tRNA gene911 http://www.ncbi.nlm.nih.gov/gene/?term=VCt051 VCt052 VCt052 tRNA-Tyr-3 tRNA-Tyr-3 973340 973424 - tRNA-Tyr tRNA gene912 http://www.ncbi.nlm.nih.gov/gene/?term=VCt052 VCt053 VCt053 tRNA-Tyr-4 tRNA-Tyr-4 973509 973593 - tRNA-Tyr tRNA gene913 http://www.ncbi.nlm.nih.gov/gene/?term=VCt053 VCt054 VCt054 tRNA-Tyr-5 tRNA-Tyr-5 973679 973763 - tRNA-Tyr tRNA gene914 http://www.ncbi.nlm.nih.gov/gene/?term=VCt054 VCt055 VCt055 tRNA-Asn-1 tRNA-Asn-1 1087128 1087203 - tRNA-Asn tRNA gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=VCt055 VCt056 VCt056 tRNA-Cys-1 tRNA-Cys-1 1293914 1293987 + tRNA-Cys tRNA gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=VCt056 VCt057 VCt057 tRNA-Gly-1 tRNA-Gly-1 1293990 1294065 + tRNA-Gly tRNA gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=VCt057 VCt058 VCt058 tRNA-Leu-1 tRNA-Leu-1 1294130 1294216 + tRNA-Leu tRNA gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=VCt058 VCt059 VCt059 tRNA-Gly-2 tRNA-Gly-2 1294227 1294302 + tRNA-Gly tRNA gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=VCt059 VCt060 VCt060 tRNA-Val-1 tRNA-Val-1 1712295 1712371 - tRNA-Val tRNA gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=VCt060 VCt061 VCt061 tRNA-Val-2 tRNA-Val-2 1712393 1712469 - tRNA-Val tRNA gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=VCt061 VCt062 VCt062 tRNA-Ser-2 tRNA-Ser-2 1895692 1895779 + tRNA-Ser tRNA gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=VCt062 VCt063 VCt063 tRNA-Arg-2 tRNA-Arg-2 2093320 2093396 - tRNA-Arg tRNA gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=VCt063 VCt064 VCt064 tRNA-Pro-3 tRNA-Pro-3 2199243 2199319 + tRNA-Pro tRNA gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=VCt064 VCt065 VCt065 tRNA-Ser-3 tRNA-Ser-3 2199484 2199574 + tRNA-Ser tRNA gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=VCt065 VCt066 VCt066 tRNA-Met-1 tRNA-Met-1 2330906 2330982 + tRNA-Met tRNA gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=VCt066 VCt067 VCt067 tRNA-Leu-2 tRNA-Leu-2 2331011 2331096 + tRNA-Leu tRNA gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=VCt067 VCt068 VCt068 tRNA-Leu-3 tRNA-Leu-3 2331121 2331205 + tRNA-Leu tRNA gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=VCt068 VCt069 VCt069 tRNA-Gln-1 tRNA-Gln-1 2331233 2331307 + tRNA-Gln tRNA gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=VCt069 VCt070 VCt070 tRNA-Met-2 tRNA-Met-2 2331385 2331461 + tRNA-Met tRNA gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=VCt070 VCt071 VCt071 tRNA-Leu-4 tRNA-Leu-4 2331485 2331570 + tRNA-Leu tRNA gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=VCt071 VCt072 VCt072 tRNA-Gln-2 tRNA-Gln-2 2331588 2331662 + tRNA-Gln tRNA gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=VCt072 VCt073 VCt073 tRNA-Leu-5 tRNA-Leu-5 2331704 2331788 + tRNA-Leu tRNA gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=VCt073 VCt074 VCt074 tRNA-Gln-3 tRNA-Gln-3 2331815 2331889 + tRNA-Gln tRNA gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=VCt074 VCt075 VCt075 tRNA-Leu-6 tRNA-Leu-6 2331931 2332015 + tRNA-Leu tRNA gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=VCt075 VCt076 VCt076 tRNA-Met-3 tRNA-Met-3 2332041 2332117 + tRNA-Met tRNA gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=VCt076 VCt077 VCt077 tRNA-Leu-7 tRNA-Leu-7 2332140 2332225 + tRNA-Leu tRNA gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=VCt077 VCt078 VCt078 tRNA-Gln-4 tRNA-Gln-4 2332243 2332317 + tRNA-Gln tRNA gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=VCt078 VCt079 VCt079 tRNA-Leu-8 tRNA-Leu-8 2332361 2332445 + tRNA-Leu tRNA gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=VCt079 VCt080 VCt080 tRNA-Gln-5 tRNA-Gln-5 2332484 2332558 + tRNA-Gln tRNA gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=VCt080 VCt081 VCt081 tRNA-Leu-9 tRNA-Leu-9 2332600 2332684 + tRNA-Leu tRNA gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=VCt081 VCt082 VCt082 tRNA-Pro-4 tRNA-Pro-4 2375624 2375700 - tRNA-Pro tRNA gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=VCt082 VCt083 VCt083 tRNA-Thr-1 tRNA-Thr-1 2676117 2676192 - tRNA-Thr tRNA gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=VCt083 VCt084 VCt084 tRNA-Ala-1 tRNA-Ala-1 2679660 2679735 - tRNA-Ala tRNA gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=VCt084 VCt085 VCt085 tRNA-Ile-1 tRNA-Ile-1 2679744 2679820 - tRNA-Ile tRNA gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=VCt085 VCt086 VCt086 tRNA-Leu-10 tRNA-Leu-10 2683338 2683422 - tRNA-Leu tRNA gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=VCt086 VCt087 VCt087 tRNA-Asp-1 tRNA-Asp-1 2927796 2927872 - tRNA-Asp tRNA gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=VCt087 VCt088 VCt088 tRNA-Ala-2 tRNA-Ala-2 2931319 2931394 - tRNA-Ala tRNA gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=VCt088 VCt089 VCt089 tRNA-Val-3 tRNA-Val-3 2931400 2931475 - tRNA-Val tRNA gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=VCt089 VCt090 VCt090 tRNA-Lys-1 tRNA-Lys-1 2931506 2931580 - tRNA-Lys tRNA gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=VCt090 VCt091 VCt091 tRNA-Glu-2 tRNA-Glu-2 2931600 2931675 - tRNA-Glu tRNA gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=VCt091 VCt092 VCt092 tRNA-Val-4 tRNA-Val-4 2937121 2937196 - tRNA-Val tRNA gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=VCt092 VCt093 VCt093 tRNA-Lys-2 tRNA-Lys-2 2937227 2937301 - tRNA-Lys tRNA gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=VCt093 VCt094 VCt094 tRNA-Glu-3 tRNA-Glu-3 2937321 2937396 - tRNA-Glu tRNA gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=VCt094