VC395_RS00005 PF00076 RNA recognition motif VC395_RS00010 PF01177 Asp/Glu/Hydantoin racemase VC395_RS00015 PF00082 Subtilase family VC395_RS00015 PF04151 Bacterial pre-peptidase C-terminal domain VC395_RS00015 PF05922 Peptidase inhibitor I9 VC395_RS00020 PF00593 TonB dependent receptor VC395_RS00020 PF07715 TonB-dependent Receptor Plug Domain VC395_RS00035 PF13166 VC395_RS00035 VC395_RS00040 PF01381 Helix-turn-helix VC395_RS00050 PF07804 HipA-like C-terminal domain VC395_RS00050 PF07805 HipA-like N-terminal domain VC395_RS00050 PF13657 HipA N-terminal domain VC395_RS00065 PF13175 AAA ATPase domain VC395_RS00070 PF00580 UvrD/REP helicase N-terminal domain VC395_RS00075 PF01935 Domain of unknown function DUF87 VC395_RS00080 PF13289 VC395_RS00080 VC395_RS00090 PF00665 Integrase core domain VC395_RS00090 PF13276 VC395_RS00090 VC395_RS00095 PF01527 Transposase VC395_RS00100 PF04471 Restriction endonuclease VC395_RS00105 PF00239 Resolvase, N terminal domain VC395_RS00105 PF02796 Helix-turn-helix domain of resolvase VC395_RS00125 PF00589 Phage integrase family VC395_RS00130 PF05958 tRNA (Uracil-5-)-methyltransferase VC395_RS00135 PF07226 VC395_RS00135 VC395_RS00140 PF00440 Bacterial regulatory proteins, tetR family VC395_RS00145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VC395_RS00145 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC395_RS00150 PF00140 Sigma-70 factor, region 1 VC395_RS00150 PF04542 Sigma-70 region 2 VC395_RS00150 PF04545 Sigma-70, region 4 VC395_RS00155 PF02687 VC395_RS00155 VC395_RS00160 PF00005 ABC transporter VC395_RS00165 PF00448 SRP54-type protein, GTPase domain VC395_RS00165 PF02881 SRP54-type protein, helical bundle domain VC395_RS00170 PF03602 Conserved hypothetical protein 95 VC395_RS00175 PF06611 VC395_RS00175 VC395_RS00180 PF07947 VC395_RS00180 VC395_RS00195 PF13643 VC395_RS00195 VC395_RS00200 PF10694 Protein of unknown function (DUF2500) VC395_RS00205 PF00210 Ferritin-like domain VC395_RS00210 PF00563 EAL domain VC395_RS00210 PF08668 HDOD domain VC395_RS00215 PF01810 VC395_RS00215 VC395_RS00220 PF12146 Putative lysophospholipase VC395_RS00225 PF08282 haloacid dehalogenase-like hydrolase VC395_RS00240 PF03942 VC395_RS00240 VC395_RS00245 PF00563 EAL domain VC395_RS00245 PF00990 GGDEF domain VC395_RS00245 PF08495 VC395_RS00245 VC395_RS00245 PF10442 VC395_RS00245 VC395_RS00250 PF13419 Haloacid dehalogenase-like hydrolase VC395_RS00255 PF00589 Phage integrase family VC395_RS00255 PF02899 Phage integrase, N-terminal SAM-like domain VC395_RS00260 PF04340 Protein of unknown function, DUF484 VC395_RS00265 PF01678 Diaminopimelate epimerase VC395_RS00270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VC395_RS00270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VC395_RS00275 PF13627 VC395_RS00275 VC395_RS00280 PF01491 Frataxin-like domain VC395_RS00285 PF01295 VC395_RS00285 VC395_RS00285 PF12633 VC395_RS00285 VC395_RS00295 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VC395_RS00295 PF03900 Porphobilinogen deaminase, C-terminal domain VC395_RS00300 PF02602 Uroporphyrinogen-III synthase HemD VC395_RS00305 PF04375 VC395_RS00305 VC395_RS00310 PF07219 VC395_RS00310 VC395_RS00315 PF04055 Radical SAM superfamily VC395_RS00315 PF06969 HemN C-terminal domain VC395_RS00320 PF10675 VC395_RS00320 VC395_RS00325 PF04220 VC395_RS00325 VC395_RS00330 PF13489 Methyltransferase domain VC395_RS00335 PF00034 Cytochrome c VC395_RS00340 PF01926 50S ribosome-binding GTPase VC395_RS00345 PF00476 DNA polymerase family A VC395_RS00345 PF01367 5'-3' exonuclease, C-terminal SAM fold VC395_RS00345 PF01612 3'-5' exonuclease VC395_RS00345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VC395_RS00350 PF13673 Acetyltransferase (GNAT) domain VC395_RS00355 PF00490 Delta-aminolevulinic acid dehydratase VC395_RS00360 PF01026 TatD related DNase VC395_RS00370 PF00581 Rhodanese-like domain VC395_RS00375 PF01694 Rhomboid family VC395_RS00375 PF12122 Protein of unknown function (DUF3582) VC395_RS00380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS00380 PF08447 PAS fold VC395_RS00380 PF08448 PAS fold VC395_RS00385 PF03748 VC395_RS00385 VC395_RS00395 PF04345 Chorismate lyase VC395_RS00400 PF01040 UbiA prenyltransferase family VC395_RS00405 PF01553 Acyltransferase VC395_RS00410 PF00717 Peptidase S24-like VC395_RS00410 PF01726 LexA DNA binding domain VC395_RS00415 PF04072 Leucine carboxyl methyltransferase VC395_RS00420 PF01554 MatE VC395_RS00425 PF00034 Cytochrome c VC395_RS00425 PF03150 Di-haem cytochrome c peroxidase VC395_RS00430 PF00902 Sec-independent protein translocase protein (TatC) VC395_RS00435 PF02416 mttA/Hcf106 family VC395_RS00440 PF02416 mttA/Hcf106 family VC395_RS00445 PF03109 VC395_RS00445 VC395_RS00450 PF02036 SCP-2 sterol transfer family VC395_RS00455 PF01209 ubiE/COQ5 methyltransferase family VC395_RS00460 PF02646 VC395_RS00460 VC395_RS00465 PF00892 EamA-like transporter family VC395_RS00470 PF03486 HI0933-like protein VC395_RS00475 PF10625 VC395_RS00475 VC395_RS00480 PF00210 Ferritin-like domain VC395_RS00490 PF00582 Universal stress protein family VC395_RS00495 PF00892 EamA-like transporter family VC395_RS00505 PF04445 Putative SAM-dependent methyltransferase VC395_RS00510 PF00563 EAL domain VC395_RS00510 PF00990 GGDEF domain VC395_RS00510 PF13426 PAS domain VC395_RS00515 PF01037 AsnC family VC395_RS00515 PF13404 AsnC-type helix-turn-helix domain VC395_RS00525 PF07690 Major Facilitator Superfamily VC395_RS00530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS00530 PF03466 LysR substrate binding domain VC395_RS00535 PF00557 Metallopeptidase family M24 VC395_RS00535 PF01321 Creatinase/Prolidase N-terminal domain VC395_RS00535 PF16188 VC395_RS00535 VC395_RS00535 PF16189 VC395_RS00535 VC395_RS00540 PF04055 Radical SAM superfamily VC395_RS00540 PF06968 Biotin and Thiamin Synthesis associated domain VC395_RS00545 PF05690 Thiazole biosynthesis protein ThiG VC395_RS00550 PF02597 ThiS family VC395_RS00555 PF00899 ThiF family VC395_RS00560 PF02581 Thiamine monophosphate synthase/TENI VC395_RS00565 PF01964 ThiC family VC395_RS00565 PF13667 ThiC-associated domain VC395_RS00570 PF02537 VC395_RS00570 VC395_RS00610 PF00132 Bacterial transferase hexapeptide (six repeats) VC395_RS00615 PF07369 Protein of unknown function (DUF1488) VC395_RS00620 PF01488 Shikimate / quinate 5-dehydrogenase VC395_RS00620 PF08501 Shikimate dehydrogenase substrate binding domain VC395_RS00625 PF01218 Coproporphyrinogen III oxidase VC395_RS00630 PF01300 Telomere recombination VC395_RS00635 PF00731 AIR carboxylase VC395_RS00640 PF02222 ATP-grasp domain VC395_RS00645 PF01396 VC395_RS00645 VC395_RS00650 PF04361 VC395_RS00650 VC395_RS00655 PF02481 DNA recombination-mediator protein A VC395_RS00660 PF01476 LysM domain VC395_RS00665 PF01327 Polypeptide deformylase VC395_RS00670 PF00551 Formyl transferase VC395_RS00670 PF02911 Formyl transferase, C-terminal domain VC395_RS00675 PF01029 NusB family VC395_RS00675 PF01189 NOL1/NOP2/sun family VC395_RS00680 PF02080 TrkA-C domain VC395_RS00680 PF02254 TrkA-N domain VC395_RS00685 PF02386 Cation transport protein VC395_RS00690 PF11355 VC395_RS00690 VC395_RS00695 PF03006 VC395_RS00695 VC395_RS00700 PF07070 VC395_RS00700 VC395_RS00710 PF06288 Protein of unknown function (DUF1040) VC395_RS00715 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VC395_RS00715 PF12801 VC395_RS00715 VC395_RS00715 PF13746 4Fe-4S dicluster domain VC395_RS00720 PF01636 Phosphotransferase enzyme family VC395_RS00725 PF01323 DSBA-like thioredoxin domain VC395_RS00730 PF01553 Acyltransferase VC395_RS00735 PF01078 Magnesium chelatase, subunit ChlI VC395_RS00735 PF13335 VC395_RS00735 VC395_RS00735 PF13541 Subunit ChlI of Mg-chelatase VC395_RS00740 PF00205 Thiamine pyrophosphate enzyme, central domain VC395_RS00740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VC395_RS00740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VC395_RS00745 PF13710 ACT domain VC395_RS00750 PF01063 Aminotransferase class IV VC395_RS00755 PF00920 Dehydratase family VC395_RS00760 PF00291 Pyridoxal-phosphate dependent enzyme VC395_RS00760 PF00585 C-terminal regulatory domain of Threonine dehydratase VC395_RS00765 PF00107 Zinc-binding dehydrogenase VC395_RS00765 PF08240 Alcohol dehydrogenase GroES-like domain VC395_RS00775 PF01206 Sulfurtransferase TusA VC395_RS00785 PF01169 VC395_RS00785 VC395_RS00790 PF02091 Glycyl-tRNA synthetase alpha subunit VC395_RS00795 PF02092 VC395_RS00795 VC395_RS00795 PF05746 DALR anticodon binding domain VC395_RS00800 PF00155 Aminotransferase class I and II VC395_RS00805 PF00011 Hsp20/alpha crystallin family VC395_RS00820 PF00204 DNA gyrase B VC395_RS00820 PF00986 DNA gyrase B subunit, carboxyl terminus VC395_RS00820 PF01751 Toprim domain VC395_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS00825 PF02463 RecF/RecN/SMC N terminal domain VC395_RS00830 PF00712 DNA polymerase III beta subunit, N-terminal domain VC395_RS00830 PF02767 DNA polymerase III beta subunit, central domain VC395_RS00830 PF02768 DNA polymerase III beta subunit, C-terminal domain VC395_RS00835 PF00308 Bacterial dnaA protein VC395_RS00835 PF08299 Bacterial dnaA protein helix-turn-helix VC395_RS00835 PF11638 DnaA N-terminal domain VC395_RS00840 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS00845 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS00850 PF00005 ABC transporter VC395_RS00855 PF00468 Ribosomal protein L34 VC395_RS00860 PF00825 Ribonuclease P VC395_RS00865 PF01809 VC395_RS00865 VC395_RS00870 PF02096 60Kd inner membrane protein VC395_RS00870 PF14849 YidC periplasmic domain VC395_RS00875 PF01926 50S ribosome-binding GTPase VC395_RS00875 PF10396 GTP-binding protein TrmE N-terminus VC395_RS00875 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE VC395_RS00880 PF00258 Flavodoxin VC395_RS00890 PF01134 Glucose inhibited division protein A VC395_RS00890 PF13932 GidA associated domain 3 VC395_RS00895 PF02527 rRNA small subunit methyltransferase G VC395_RS00900 PF13614 AAA domain VC395_RS00905 PF02195 ParB-like nuclease domain VC395_RS00910 PF03899 VC395_RS00910 VC395_RS00915 PF00119 ATP synthase A chain VC395_RS00920 PF00137 ATP synthase subunit C VC395_RS00925 PF00430 ATP synthase B/B' CF(0) VC395_RS00930 PF00213 ATP synthase delta (OSCP) subunit VC395_RS00935 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VC395_RS00935 PF00306 ATP synthase alpha/beta chain, C terminal domain VC395_RS00935 PF02874 ATP synthase alpha/beta family, beta-barrel domain VC395_RS00940 PF00231 ATP synthase VC395_RS00945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VC395_RS00945 PF02874 ATP synthase alpha/beta family, beta-barrel domain VC395_RS00950 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VC395_RS00950 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VC395_RS00955 PF00132 Bacterial transferase hexapeptide (six repeats) VC395_RS00955 PF12804 MobA-like NTP transferase domain VC395_RS00960 PF07690 Major Facilitator Superfamily VC395_RS00965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS00965 PF03466 LysR substrate binding domain VC395_RS00970 PF00108 Thiolase, N-terminal domain VC395_RS00970 PF02803 Thiolase, C-terminal domain VC395_RS00975 PF00378 Enoyl-CoA hydratase/isomerase family VC395_RS00975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VC395_RS00975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VC395_RS00980 PF01205 Uncharacterized protein family UPF0029 VC395_RS00980 PF09186 Domain of unknown function (DUF1949) VC395_RS00985 PF02386 Cation transport protein VC395_RS00990 PF12724 Flavodoxin domain VC395_RS01035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS01035 PF03466 LysR substrate binding domain VC395_RS01040 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VC395_RS01040 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain VC395_RS01045 PF04380 VC395_RS01045 VC395_RS01050 PF00873 AcrB/AcrD/AcrF family VC395_RS01055 PF16576 VC395_RS01055 VC395_RS01060 PF00440 Bacterial regulatory proteins, tetR family VC395_RS01065 PF00580 UvrD/REP helicase N-terminal domain VC395_RS01065 PF13361 UvrD-like helicase C-terminal domain VC395_RS01070 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VC395_RS01110 PF00005 ABC transporter VC395_RS01110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC395_RS01115 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC395_RS01120 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS01125 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS01125 PF12911 VC395_RS01125 VC395_RS01135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VC395_RS01135 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC395_RS01140 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ VC395_RS01145 PF01432 Peptidase family M3 VC395_RS01150 PF00580 UvrD/REP helicase N-terminal domain VC395_RS01150 PF13361 UvrD-like helicase C-terminal domain VC395_RS01155 PF01810 VC395_RS01155 VC395_RS01160 PF02311 AraC-like ligand binding domain VC395_RS01160 PF12833 Helix-turn-helix domain VC395_RS01165 PF01019 Gamma-glutamyltranspeptidase VC395_RS01170 PF00892 EamA-like transporter family VC395_RS01175 PF00270 DEAD/DEAH box helicase VC395_RS01175 PF00271 Helicase conserved C-terminal domain VC395_RS01175 PF00570 HRDC domain VC395_RS01175 PF09382 RQC domain VC395_RS01175 PF16124 VC395_RS01175 VC395_RS01180 PF12305 VC395_RS01180 VC395_RS01190 PF00005 ABC transporter VC395_RS01190 PF00664 ABC transporter transmembrane region VC395_RS01195 PF00593 TonB dependent receptor VC395_RS01195 PF07715 TonB-dependent Receptor Plug Domain VC395_RS01200 PF00005 ABC transporter VC395_RS01205 PF01497 Periplasmic binding protein VC395_RS01210 PF01032 FecCD transport family VC395_RS01215 PF01380 SIS domain VC395_RS01215 PF01418 Helix-turn-helix domain, rpiR family VC395_RS01225 PF13580 SIS domain VC395_RS01230 PF00367 phosphotransferase system, EIIB VC395_RS01230 PF02378 Phosphotransferase system, EIIC VC395_RS01235 PF03350 VC395_RS01235 VC395_RS01240 PF03755 VC395_RS01240 VC395_RS01240 PF08340 VC395_RS01240 VC395_RS01245 PF01138 3' exoribonuclease family, domain 1 VC395_RS01245 PF03725 3' exoribonuclease family, domain 2 VC395_RS01250 PF00156 Phosphoribosyl transferase domain VC395_RS01255 PF03279 VC395_RS01255 VC395_RS01260 PF03279 VC395_RS01260 VC395_RS01265 PF00440 Bacterial regulatory proteins, tetR family VC395_RS01270 PF02441 Flavoprotein VC395_RS01270 PF04127 DNA / pantothenate metabolism flavoprotein VC395_RS01275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS01275 PF00672 HAMP domain VC395_RS01275 PF17200 VC395_RS01275 VC395_RS01280 PF04002 RadC-like JAB domain VC395_RS01285 PF00830 Ribosomal L28 family VC395_RS01290 PF00471 Ribosomal protein L33 VC395_RS01300 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VC395_RS01300 PF06827 Zinc finger found in FPG and IleRS VC395_RS01300 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VC395_RS01305 PF01467 Cytidylyltransferase VC395_RS01310 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VC395_RS01315 PF00535 Glycosyl transferase family 2 VC395_RS01320 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VC395_RS01325 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family VC395_RS01330 PF07507 VC395_RS01330 VC395_RS01335 PF07507 VC395_RS01335 VC395_RS01350 PF08282 haloacid dehalogenase-like hydrolase VC395_RS01355 PF00534 Glycosyl transferases group 1 VC395_RS01355 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VC395_RS01360 PF04488 Glycosyltransferase sugar-binding region containing DXD motif VC395_RS01365 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VC395_RS01370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VC395_RS01375 PF04932 VC395_RS01375 VC395_RS01380 PF00132 Bacterial transferase hexapeptide (six repeats) VC395_RS01385 PF01522 Polysaccharide deacetylase VC395_RS01385 PF13439 Glycosyltransferase Family 4 VC395_RS01390 PF01370 NAD dependent epimerase/dehydratase family VC395_RS01395 PF00483 Nucleotidyl transferase VC395_RS01395 PF01050 Mannose-6-phosphate isomerase VC395_RS01400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VC395_RS01400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VC395_RS01400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VC395_RS01400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VC395_RS01405 PF16363 VC395_RS01405 VC395_RS01410 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VC395_RS01415 PF00534 Glycosyl transferases group 1 VC395_RS01420 PF01061 VC395_RS01420 VC395_RS01425 PF00005 ABC transporter VC395_RS01430 PF00550 Phosphopantetheine attachment site VC395_RS01435 PF00501 AMP-binding enzyme VC395_RS01435 PF13193 AMP-binding enzyme C-terminal domain VC395_RS01440 PF00465 Iron-containing alcohol dehydrogenase VC395_RS01445 PF04443 VC395_RS01445 VC395_RS01445 PF05893 Acyl-CoA reductase (LuxC) VC395_RS01450 PF00132 Bacterial transferase hexapeptide (six repeats) VC395_RS01455 PF13808 VC395_RS01455 VC395_RS01460 PF01609 Transposase DDE domain VC395_RS01470 PF05575 VC395_RS01470 VC395_RS01475 PF00534 Glycosyl transferases group 1 VC395_RS01475 PF13439 Glycosyltransferase Family 4 VC395_RS01480 PF02719 Polysaccharide biosynthesis protein VC395_RS01485 PF01370 NAD dependent epimerase/dehydratase family VC395_RS01490 PF02397 VC395_RS01490 VC395_RS01495 PF00753 Metallo-beta-lactamase superfamily VC395_RS01495 PF07521 RNA-metabolising metallo-beta-lactamase VC395_RS01495 PF10996 Beta-Casp domain VC395_RS01500 PF00924 Mechanosensitive ion channel VC395_RS01505 PF03167 Uracil DNA glycosylase superfamily VC395_RS01510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC395_RS01515 PF04222 Protein of unknown function (DUF416) VC395_RS01520 PF01238 Phosphomannose isomerase type I VC395_RS01525 PF00480 ROK family VC395_RS01530 PF00571 CBS domain VC395_RS01530 PF01595 VC395_RS01530 VC395_RS01540 PF00216 Bacterial DNA-binding protein VC395_RS01545 PF07356 VC395_RS01545 VC395_RS01550 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VC395_RS01550 PF02843 Phosphoribosylglycinamide synthetase, C domain VC395_RS01550 PF02844 Phosphoribosylglycinamide synthetase, N domain VC395_RS01555 PF01808 AICARFT/IMPCHase bienzyme VC395_RS01555 PF02142 MGS-like domain VC395_RS01560 PF13411 MerR HTH family regulatory protein VC395_RS01565 PF00486 Transcriptional regulatory protein, C terminal VC395_RS01570 PF13520 Amino acid permease VC395_RS01575 PF01276 Orn/Lys/Arg decarboxylase, major domain VC395_RS01575 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VC395_RS01575 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VC395_RS01580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS01580 PF00672 HAMP domain VC395_RS01580 PF17200 VC395_RS01580 VC395_RS01585 PF16357 VC395_RS01585 VC395_RS01590 PF00593 TonB dependent receptor VC395_RS01590 PF07715 TonB-dependent Receptor Plug Domain VC395_RS01595 PF01081 KDPG and KHG aldolase VC395_RS01600 PF02447 VC395_RS01600 VC395_RS01605 PF01202 Shikimate kinase VC395_RS01610 PF00920 Dehydratase family VC395_RS01615 PF00356 Bacterial regulatory proteins, lacI family VC395_RS01615 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VC395_RS01620 PF00589 Phage integrase family VC395_RS01620 PF13356 Domain of unknown function (DUF4102) VC395_RS01625 PF02661 Fic/DOC family VC395_RS01630 PF00270 DEAD/DEAH box helicase VC395_RS01630 PF00271 Helicase conserved C-terminal domain VC395_RS01635 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) VC395_RS01640 PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) VC395_RS01645 PF08798 CRISPR associated protein VC395_RS01650 PF09344 CT1975-like protein VC395_RS01655 PF09704 CRISPR-associated protein (Cas_Cas5) VC395_RS01660 PF01867 CRISPR associated protein Cas1 VC395_RS01665 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) VC395_RS01675 PF11726 VC395_RS01675 VC395_RS01685 PF05930 Prophage CP4-57 regulatory protein (AlpA) VC395_RS01695 PF02954 Bacterial regulatory protein, Fis family VC395_RS01700 PF01207 Dihydrouridine synthase (Dus) VC395_RS01705 PF06325 Ribosomal protein L11 methyltransferase (PrmA) VC395_RS01710 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain VC395_RS01710 PF02785 Biotin carboxylase C-terminal domain VC395_RS01710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VC395_RS01715 PF00364 Biotin-requiring enzyme VC395_RS01720 PF01220 Dehydroquinase class II VC395_RS01725 PF00501 AMP-binding enzyme VC395_RS01725 PF13193 AMP-binding enzyme C-terminal domain VC395_RS01725 PF16177 VC395_RS01725 VC395_RS01730 PF00929 Exonuclease VC395_RS01735 PF00027 Cyclic nucleotide-binding domain VC395_RS01735 PF03445 VC395_RS01735 VC395_RS01735 PF10335 VC395_RS01735 VC395_RS01745 PF12832 MFS_1 like family VC395_RS01750 PF00072 Response regulator receiver domain VC395_RS01750 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS01750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS01750 PF12860 VC395_RS01750 VC395_RS01755 PF02541 Ppx/GppA phosphatase family VC395_RS01760 PF00270 DEAD/DEAH box helicase VC395_RS01760 PF00271 Helicase conserved C-terminal domain VC395_RS01765 PF00085 Thioredoxin VC395_RS01770 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VC395_RS01770 PF07497 Rho termination factor, RNA-binding domain VC395_RS01770 PF07498 Rho termination factor, N-terminal domain VC395_RS01780 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VC395_RS01785 PF00111 2Fe-2S iron-sulfur cluster binding domain VC395_RS01790 PF00175 Oxidoreductase NAD-binding domain VC395_RS01790 PF00970 Oxidoreductase FAD-binding domain VC395_RS01825 PF13091 PLD-like domain VC395_RS01835 PF13508 Acetyltransferase (GNAT) domain VC395_RS01840 PF01565 FAD binding domain VC395_RS01840 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VC395_RS01845 PF02237 Biotin protein ligase C terminal domain VC395_RS01845 PF03099 Biotin/lipoate A/B protein ligase family VC395_RS01845 PF08279 HTH domain VC395_RS01850 PF00485 Phosphoribulokinase / Uridine kinase family VC395_RS01875 PF00009 Elongation factor Tu GTP binding domain VC395_RS01875 PF03143 Elongation factor Tu C-terminal domain VC395_RS01875 PF03144 Elongation factor Tu domain 2 VC395_RS01880 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VC395_RS01885 PF00467 KOW motif VC395_RS01885 PF02357 Transcription termination factor nusG VC395_RS01890 PF00298 Ribosomal protein L11, RNA binding domain VC395_RS01890 PF03946 Ribosomal protein L11, N-terminal domain VC395_RS01895 PF00687 Ribosomal protein L1p/L10e family VC395_RS01900 PF00466 Ribosomal protein L10 VC395_RS01905 PF00542 Ribosomal protein L7/L12 C-terminal domain VC395_RS01905 PF16320 VC395_RS01905 VC395_RS01910 PF00562 RNA polymerase Rpb2, domain 6 VC395_RS01910 PF04560 RNA polymerase Rpb2, domain 7 VC395_RS01910 PF04561 RNA polymerase Rpb2, domain 2 VC395_RS01910 PF04563 RNA polymerase beta subunit VC395_RS01910 PF04565 RNA polymerase Rpb2, domain 3 VC395_RS01910 PF10385 RNA polymerase beta subunit external 1 domain VC395_RS01915 PF00623 RNA polymerase Rpb1, domain 2 VC395_RS01915 PF04983 RNA polymerase Rpb1, domain 3 VC395_RS01915 PF04997 RNA polymerase Rpb1, domain 1 VC395_RS01915 PF04998 RNA polymerase Rpb1, domain 5 VC395_RS01915 PF05000 RNA polymerase Rpb1, domain 4 VC395_RS01920 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VC395_RS01925 PF00293 NUDIX domain VC395_RS01925 PF09297 NADH pyrophosphatase zinc ribbon domain VC395_RS01930 PF01208 Uroporphyrinogen decarboxylase (URO-D) VC395_RS01935 PF00440 Bacterial regulatory proteins, tetR family VC395_RS01935 PF13972 Bacterial transcriptional repressor VC395_RS01945 PF01551 Peptidase family M23 VC395_RS01950 PF01676 Metalloenzyme superfamily VC395_RS01950 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VC395_RS01955 PF00892 EamA-like transporter family VC395_RS01960 PF00939 Sodium:sulfate symporter transmembrane region VC395_RS01965 PF02666 VC395_RS01965 VC395_RS01970 PF03193 Protein of unknown function, DUF258 VC395_RS01975 PF00929 Exonuclease VC395_RS02020 PF08331 VC395_RS02020 VC395_RS02020 PF13484 VC395_RS02020 VC395_RS02025 PF02367 Uncharacterised P-loop hydrolase UPF0079 VC395_RS02030 PF01476 LysM domain VC395_RS02030 PF01520 N-acetylmuramoyl-L-alanine amidase VC395_RS02030 PF11741 AMIN domain VC395_RS02035 PF01119 DNA mismatch repair protein, C-terminal domain VC395_RS02035 PF08676 MutL C terminal dimerisation domain VC395_RS02035 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS02040 PF01715 IPP transferase VC395_RS02050 PF01926 50S ribosome-binding GTPase VC395_RS02050 PF13167 VC395_RS02050 VC395_RS02050 PF16360 VC395_RS02050 VC395_RS02055 PF01145 SPFH domain / Band 7 family VC395_RS02055 PF12221 VC395_RS02055 VC395_RS02060 PF01145 SPFH domain / Band 7 family VC395_RS02065 PF09838 VC395_RS02065 VC395_RS02070 PF04102 SlyX VC395_RS02075 PF00400 WD domain, G-beta repeat VC395_RS02080 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC395_RS02080 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VC395_RS02085 PF08348 VC395_RS02085 VC395_RS02085 PF13309 VC395_RS02085 VC395_RS02090 PF02635 DsrE/DsrF-like family VC395_RS02095 PF02635 DsrE/DsrF-like family VC395_RS02100 PF04077 DsrH like protein VC395_RS02105 PF00164 Ribosomal protein S12/S23 VC395_RS02110 PF00177 Ribosomal protein S7p/S5e VC395_RS02115 PF00009 Elongation factor Tu GTP binding domain VC395_RS02115 PF00679 Elongation factor G C-terminus VC395_RS02115 PF03144 Elongation factor Tu domain 2 VC395_RS02115 PF03764 Elongation factor G, domain IV VC395_RS02115 PF14492 Elongation Factor G, domain II VC395_RS02120 PF00009 Elongation factor Tu GTP binding domain VC395_RS02120 PF03143 Elongation factor Tu C-terminal domain VC395_RS02120 PF03144 Elongation factor Tu domain 2 VC395_RS02125 PF04324 BFD-like [2Fe-2S] binding domain VC395_RS02130 PF00210 Ferritin-like domain VC395_RS02135 PF01250 Ribosomal protein S6 VC395_RS02140 PF00436 Single-strand binding protein family VC395_RS02145 PF01084 Ribosomal protein S18 VC395_RS02150 PF01281 Ribosomal protein L9, N-terminal domain VC395_RS02150 PF03948 Ribosomal protein L9, C-terminal domain VC395_RS02155 PF04338 Protein of unknown function, DUF481 VC395_RS02160 PF00772 DnaB-like helicase N terminal domain VC395_RS02160 PF03796 DnaB-like helicase C terminal domain VC395_RS02165 PF00842 Alanine racemase, C-terminal domain VC395_RS02165 PF01168 Alanine racemase, N-terminal domain VC395_RS02170 PF01894 Uncharacterised protein family UPF0047 VC395_RS02175 PF00342 Phosphoglucose isomerase VC395_RS02180 PF12706 Beta-lactamase superfamily domain VC395_RS02185 PF13690 Chemotaxis phosphatase CheX VC395_RS02190 PF01475 Ferric uptake regulator family VC395_RS02195 PF01207 Dihydrouridine synthase (Dus) VC395_RS02200 PF09583 VC395_RS02200 VC395_RS02205 PF13505 Outer membrane protein beta-barrel domain VC395_RS02220 PF00175 Oxidoreductase NAD-binding domain VC395_RS02220 PF00258 Flavodoxin VC395_RS02220 PF00667 FAD binding domain VC395_RS02225 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VC395_RS02225 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VC395_RS02230 PF01507 Phosphoadenosine phosphosulfate reductase family VC395_RS02265 PF00999 Sodium/hydrogen exchanger family VC395_RS02270 PF00809 Pterin binding enzyme VC395_RS02270 PF02310 B12 binding domain VC395_RS02270 PF02574 Homocysteine S-methyltransferase VC395_RS02270 PF02607 B12 binding domain VC395_RS02270 PF02965 Vitamin B12 dependent methionine synthase, activation domain VC395_RS02275 PF00696 Amino acid kinase family VC395_RS02280 PF00266 Aminotransferase class-V VC395_RS02285 PF04932 VC395_RS02285 VC395_RS02285 PF11846 VC395_RS02285 VC395_RS02285 PF15864 VC395_RS02285 VC395_RS02290 PF00005 ABC transporter VC395_RS02295 PF00483 Nucleotidyl transferase VC395_RS02300 PF00196 Bacterial regulatory proteins, luxR family VC395_RS02305 PF00436 Single-strand binding protein family VC395_RS02310 PF00563 EAL domain VC395_RS02310 PF00990 GGDEF domain VC395_RS02310 PF17157 VC395_RS02310 VC395_RS02320 PF04612 Type II secretion system (T2SS), protein M VC395_RS02330 PF00263 VC395_RS02330 VC395_RS02330 PF07655 VC395_RS02330 VC395_RS02335 PF13401 AAA domain VC395_RS02340 PF14559 Tetratricopeptide repeat VC395_RS02345 PF00437 Type II/IV secretion system protein VC395_RS02345 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VC395_RS02350 PF00482 Type II secretion system (T2SS), protein F VC395_RS02360 PF13633 Prokaryotic N-terminal methylation site VC395_RS02365 PF13633 Prokaryotic N-terminal methylation site VC395_RS02370 PF07963 Prokaryotic N-terminal methylation motif VC395_RS02375 PF13633 Prokaryotic N-terminal methylation site VC395_RS02395 PF06723 MreB/Mbl protein VC395_RS02400 PF04085 rod shape-determining protein MreC VC395_RS02405 PF04093 VC395_RS02405 VC395_RS02410 PF02545 Maf-like protein VC395_RS02415 PF00575 S1 RNA binding domain VC395_RS02415 PF10150 Ribonuclease E/G family VC395_RS02420 PF13116 VC395_RS02420 VC395_RS02420 PF13502 VC395_RS02420 VC395_RS02425 PF00795 Carbon-nitrogen hydrolase VC395_RS02430 PF01523 Putative modulator of DNA gyrase VC395_RS02435 PF02274 Amidinotransferase VC395_RS02440 PF06877 Regulator of ribonuclease activity B VC395_RS02450 PF09834 VC395_RS02450 VC395_RS02455 PF00582 Universal stress protein family VC395_RS02460 PF06808 VC395_RS02460 VC395_RS02460 PF11874 VC395_RS02460 VC395_RS02465 PF16868 VC395_RS02465 VC395_RS02470 PF01316 Arginine repressor, DNA binding domain VC395_RS02470 PF02863 Arginine repressor, C-terminal domain VC395_RS02475 PF00056 lactate/malate dehydrogenase, NAD binding domain VC395_RS02475 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VC395_RS02480 PF13520 Amino acid permease VC395_RS02485 PF00348 Polyprenyl synthetase VC395_RS02490 PF00829 Ribosomal prokaryotic L21 protein VC395_RS02495 PF01016 Ribosomal L27 protein VC395_RS02500 PF01018 GTP1/OBG VC395_RS02500 PF01926 50S ribosome-binding GTPase VC395_RS02505 PF06738 VC395_RS02505 VC395_RS02510 PF12821 VC395_RS02510 VC395_RS02515 PF00186 Dihydrofolate reductase VC395_RS02520 PF00149 Calcineurin-like phosphoesterase VC395_RS02525 PF04379 Protein of unknown function (DUF525) VC395_RS02530 PF00398 Ribosomal RNA adenine dimethylase VC395_RS02535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VC395_RS02540 PF09312 SurA N-terminal domain VC395_RS02540 PF13616 PPIC-type PPIASE domain VC395_RS02545 PF03968 OstA-like protein VC395_RS02545 PF04453 Organic solvent tolerance protein VC395_RS02550 PF00226 DnaJ domain VC395_RS02550 PF05099 Tellurite resistance protein TerB VC395_RS02580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS02580 PF17200 VC395_RS02580 VC395_RS02605 PF01464 Transglycosylase SLT domain VC395_RS02605 PF11873 Domain of unknown function (DUF3393) VC395_RS02610 PF04362 Bacterial Fe(2+) trafficking VC395_RS02615 PF00633 Helix-hairpin-helix motif VC395_RS02615 PF00730 HhH-GPD superfamily base excision DNA repair protein VC395_RS02615 PF14815 NUDIX domain VC395_RS02620 PF02390 Putative methyltransferase VC395_RS02625 PF04960 Glutaminase VC395_RS02630 PF04055 Radical SAM superfamily VC395_RS02630 PF06969 HemN C-terminal domain VC395_RS02635 PF01725 Ham1 family VC395_RS02640 PF14467 Domain of unknown function (DUF4426) VC395_RS02645 PF02594 Uncharacterised ACR, YggU family COG1872 VC395_RS02650 PF02325 VC395_RS02650 VC395_RS02655 PF03807 NADP oxidoreductase coenzyme F420-dependent VC395_RS02655 PF14748 Pyrroline-5-carboxylate reductase dimerisation VC395_RS02660 PF01168 Alanine racemase, N-terminal domain VC395_RS02665 PF00437 Type II/IV secretion system protein VC395_RS02670 PF00437 Type II/IV secretion system protein VC395_RS02675 PF00196 Bacterial regulatory proteins, luxR family VC395_RS02680 PF00579 tRNA synthetases class I (W and Y) VC395_RS02680 PF01479 S4 domain VC395_RS02685 PF03652 Uncharacterised protein family (UPF0081) VC395_RS02690 PF02622 Uncharacterized ACR, COG1678 VC395_RS02695 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VC395_RS02695 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VC395_RS02700 PF04452 RNA methyltransferase VC395_RS02705 PF04231 Endonuclease I VC395_RS02710 PF10263 VC395_RS02710 VC395_RS02715 PF00438 S-adenosylmethionine synthetase, N-terminal domain VC395_RS02715 PF02772 S-adenosylmethionine synthetase, central domain VC395_RS02715 PF02773 S-adenosylmethionine synthetase, C-terminal domain VC395_RS02725 PF00456 Transketolase, thiamine diphosphate binding domain VC395_RS02725 PF02779 Transketolase, pyrimidine binding domain VC395_RS02725 PF02780 Transketolase, C-terminal domain VC395_RS02730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS02730 PF03466 LysR substrate binding domain VC395_RS02735 PF00593 TonB dependent receptor VC395_RS02735 PF07715 TonB-dependent Receptor Plug Domain VC395_RS02740 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC395_RS02740 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VC395_RS02745 PF00162 Phosphoglycerate kinase VC395_RS02750 PF01116 Fructose-bisphosphate aldolase class-II VC395_RS02760 PF00924 Mechanosensitive ion channel VC395_RS02760 PF05552 Conserved TM helix VC395_RS02765 PF01810 VC395_RS02765 VC395_RS02770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS02770 PF03466 LysR substrate binding domain VC395_RS02775 PF04402 Protein of unknown function (DUF541) VC395_RS02780 PF00224 Pyruvate kinase, barrel domain VC395_RS02780 PF02887 Pyruvate kinase, alpha/beta domain VC395_RS02785 PF00455 VC395_RS02785 VC395_RS02785 PF08220 DeoR-like helix-turn-helix domain VC395_RS02790 PF01380 SIS domain VC395_RS02790 PF13522 Glutamine amidotransferase domain VC395_RS02795 PF03480 Bacterial extracellular solute-binding protein, family 7 VC395_RS02800 PF01553 Acyltransferase VC395_RS02800 PF13444 Acetyltransferase (GNAT) domain VC395_RS02810 PF00140 Sigma-70 factor, region 1 VC395_RS02810 PF03979 Sigma-70 factor, region 1 VC395_RS02810 PF04539 Sigma-70 region 3 VC395_RS02810 PF04542 Sigma-70 region 2 VC395_RS02810 PF04545 Sigma-70, region 4 VC395_RS02810 PF04546 Sigma-70, non-essential region VC395_RS02815 PF01807 CHC2 zinc finger VC395_RS02815 PF08275 DNA primase catalytic core, N-terminal domain VC395_RS02815 PF08278 DNA primase DnaG DnaB-binding VC395_RS02815 PF10410 DnaB-helicase binding domain of primase VC395_RS02815 PF13155 Toprim-like VC395_RS02820 PF09424 Yqey-like protein VC395_RS02825 PF01165 Ribosomal protein S21 VC395_RS02830 PF00814 Glycoprotease family VC395_RS02835 PF00561 alpha/beta hydrolase fold VC395_RS02840 PF02660 VC395_RS02840 VC395_RS02845 PF02152 Dihydroneopterin aldolase VC395_RS02850 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VC395_RS02855 PF02673 VC395_RS02855 VC395_RS02860 PF04977 Septum formation initiator VC395_RS02865 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VC395_RS02870 PF02542 YgbB family VC395_RS02875 PF01142 tRNA pseudouridine synthase D (TruD) VC395_RS02880 PF01975 Survival protein SurE VC395_RS02885 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) VC395_RS02890 PF01476 LysM domain VC395_RS02890 PF01551 Peptidase family M23 VC395_RS02895 PF00140 Sigma-70 factor, region 1 VC395_RS02895 PF04539 Sigma-70 region 3 VC395_RS02895 PF04542 Sigma-70 region 2 VC395_RS02895 PF04545 Sigma-70, region 4 VC395_RS02900 PF00488 MutS domain V VC395_RS02900 PF01624 MutS domain I VC395_RS02900 PF05188 MutS domain II VC395_RS02900 PF05190 MutS family domain IV VC395_RS02900 PF05192 MutS domain III VC395_RS02905 PF00291 Pyridoxal-phosphate dependent enzyme VC395_RS02910 PF13531 Bacterial extracellular solute-binding protein VC395_RS02915 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS02920 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS02925 PF00005 ABC transporter VC395_RS02925 PF12857 VC395_RS02925 VC395_RS02930 PF02464 Competence-damaged protein VC395_RS02935 PF00154 recA bacterial DNA recombination protein VC395_RS02940 PF02631 RecX family VC395_RS02945 PF01411 tRNA synthetases class II (A) VC395_RS02945 PF02272 DHHA1 domain VC395_RS02945 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VC395_RS02950 PF00696 Amino acid kinase family VC395_RS02955 PF02599 Global regulator protein family VC395_RS03005 PF04277 VC395_RS03005 VC395_RS03010 PF00364 Biotin-requiring enzyme VC395_RS03010 PF00682 HMGL-like VC395_RS03010 PF02436 Conserved carboxylase domain VC395_RS03015 PF03977 VC395_RS03015 VC395_RS03020 PF08240 Alcohol dehydrogenase GroES-like domain VC395_RS03020 PF13602 Zinc-binding dehydrogenase VC395_RS03025 PF09335 VC395_RS03025 VC395_RS03030 PF00675 Insulinase (Peptidase family M16) VC395_RS03030 PF05193 Peptidase M16 inactive domain VC395_RS03035 PF04262 Glutamate-cysteine ligase VC395_RS03040 PF02664 S-Ribosylhomocysteinase (LuxS) VC395_RS03045 PF00571 CBS domain VC395_RS03045 PF01595 VC395_RS03045 VC395_RS03045 PF03471 Transporter associated domain VC395_RS03050 PF01578 VC395_RS03050 VC395_RS03055 PF00448 SRP54-type protein, GTPase domain VC395_RS03055 PF02881 SRP54-type protein, helical bundle domain VC395_RS03055 PF02978 Signal peptide binding domain VC395_RS03060 PF00886 Ribosomal protein S16 VC395_RS03065 PF01782 RimM N-terminal domain VC395_RS03065 PF05239 PRC-barrel domain VC395_RS03070 PF01746 tRNA (Guanine-1)-methyltransferase VC395_RS03075 PF01245 Ribosomal protein L19 VC395_RS03080 PF13180 PDZ domain VC395_RS03080 PF13365 Trypsin-like peptidase domain VC395_RS03085 PF00595 PDZ domain (Also known as DHR or GLGF) VC395_RS03085 PF13180 PDZ domain VC395_RS03085 PF13365 Trypsin-like peptidase domain VC395_RS03090 PF06295 VC395_RS03090 VC395_RS03095 PF03969 AFG1-like ATPase VC395_RS03105 PF00572 Ribosomal protein L13 VC395_RS03110 PF00380 Ribosomal protein S9/S16 VC395_RS03115 PF00355 Rieske [2Fe-2S] domain VC395_RS03115 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VC395_RS03120 PF00032 Cytochrome b(C-terminal)/b6/petD VC395_RS03120 PF00033 Cytochrome b(N-terminal)/b6/petB VC395_RS03125 PF02167 Cytochrome C1 family VC395_RS03130 PF00043 Glutathione S-transferase, C-terminal domain VC395_RS03130 PF13417 Glutathione S-transferase, N-terminal domain VC395_RS03135 PF04386 Stringent starvation protein B VC395_RS03140 PF04972 BON domain VC395_RS03145 PF13580 SIS domain VC395_RS03150 PF02021 Uncharacterised protein family UPF0102 VC395_RS03155 PF04348 LppC putative lipoprotein VC395_RS03160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VC395_RS03165 PF00440 Bacterial regulatory proteins, tetR family VC395_RS03170 PF00156 Phosphoribosyl transferase domain VC395_RS03175 PF00484 Carbonic anhydrase VC395_RS03180 PF00916 VC395_RS03180 VC395_RS03180 PF01740 STAS domain VC395_RS03185 PF00005 ABC transporter VC395_RS03190 PF01061 VC395_RS03190 VC395_RS03195 PF02569 Pantoate-beta-alanine ligase VC395_RS03200 PF02548 Ketopantoate hydroxymethyltransferase VC395_RS03205 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VC395_RS03210 PF01743 Poly A polymerase head domain VC395_RS03210 PF12626 Polymerase A arginine-rich C-terminus VC395_RS03210 PF12627 Probable RNA and SrmB- binding site of polymerase A VC395_RS03215 PF00749 tRNA synthetases class I (E and Q), catalytic domain VC395_RS03220 PF01258 Prokaryotic dksA/traR C4-type zinc finger VC395_RS03225 PF03749 Sugar fermentation stimulation protein VC395_RS03230 PF12697 Alpha/beta hydrolase family VC395_RS03235 PF00270 DEAD/DEAH box helicase VC395_RS03235 PF00271 Helicase conserved C-terminal domain VC395_RS03235 PF04408 Helicase associated domain (HA2) VC395_RS03235 PF08482 VC395_RS03235 VC395_RS03240 PF00905 Penicillin binding protein transpeptidase domain VC395_RS03240 PF00912 Transglycosylase VC395_RS03240 PF14814 Bifunctional transglycosylase second domain VC395_RS03245 PF01734 Patatin-like phospholipase VC395_RS03245 PF07244 Surface antigen variable number repeat VC395_RS03250 PF00330 Aconitase family (aconitate hydratase) VC395_RS03250 PF06434 Aconitate hydratase 2 N-terminus VC395_RS03250 PF11791 Aconitate B N-terminal domain VC395_RS03255 PF06062 VC395_RS03255 VC395_RS03260 PF00543 Nitrogen regulatory protein P-II VC395_RS03265 PF00909 Ammonium Transporter Family VC395_RS03270 PF13343 Bacterial extracellular solute-binding protein VC395_RS03275 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS03280 PF00005 ABC transporter VC395_RS03280 PF08402 TOBE domain VC395_RS03285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VC395_RS03285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VC395_RS03285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VC395_RS03285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VC395_RS03290 PF06165 Glycosyltransferase family 36 VC395_RS03290 PF17167 VC395_RS03290 VC395_RS03295 PF00728 Glycosyl hydrolase family 20, catalytic domain VC395_RS03295 PF02838 Glycosyl hydrolase family 20, domain 2 VC395_RS03300 PF01869 BadF/BadG/BcrA/BcrD ATPase family VC395_RS03305 PF00759 Glycosyl hydrolase family 9 VC395_RS03305 PF02927 N-terminal ig-like domain of cellulase VC395_RS03310 PF00005 ABC transporter VC395_RS03310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC395_RS03315 PF00005 ABC transporter VC395_RS03315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC395_RS03320 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS03320 PF12911 VC395_RS03320 VC395_RS03325 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS03330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC395_RS03340 PF00072 Response regulator receiver domain VC395_RS03340 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS03340 PF00672 HAMP domain VC395_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS03340 PF13188 PAS domain VC395_RS03345 PF05175 Methyltransferase small domain VC395_RS03345 PF08468 Methyltransferase small domain N-terminal VC395_RS03350 PF01594 VC395_RS03350 VC395_RS03360 PF00202 Aminotransferase class-III VC395_RS03365 PF01521 Iron-sulphur cluster biosynthesis VC395_RS03370 PF16576 VC395_RS03370 VC395_RS03375 PF00873 AcrB/AcrD/AcrF family VC395_RS03380 PF01551 Peptidase family M23 VC395_RS03380 PF08525 VC395_RS03380 VC395_RS03385 PF00579 tRNA synthetases class I (W and Y) VC395_RS03385 PF01479 S4 domain VC395_RS03390 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VC395_RS03395 PF13609 Gram-negative porin VC395_RS03400 PF01272 Transcription elongation factor, GreA/GreB, C-term VC395_RS03400 PF03449 Transcription elongation factor, N-terminal VC395_RS03405 PF01985 CRS1 / YhbY (CRM) domain VC395_RS03410 PF01728 FtsJ-like methyltransferase VC395_RS03415 PF00004 ATPase family associated with various cellular activities (AAA) VC395_RS03415 PF01434 Peptidase family M41 VC395_RS03415 PF06480 FtsH Extracellular VC395_RS03420 PF00809 Pterin binding enzyme VC395_RS03425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VC395_RS03425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VC395_RS03425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VC395_RS03425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VC395_RS03430 PF03840 Preprotein translocase SecG subunit VC395_RS03445 PF02576 Uncharacterised BCR, YhbC family COG0779 VC395_RS03450 PF08529 NusA N-terminal domain VC395_RS03450 PF13184 NusA-like KH domain VC395_RS03450 PF14520 Helix-hairpin-helix domain VC395_RS03455 PF00009 Elongation factor Tu GTP binding domain VC395_RS03455 PF04760 Translation initiation factor IF-2, N-terminal region VC395_RS03455 PF08364 VC395_RS03455 VC395_RS03455 PF11987 Translation-initiation factor 2 VC395_RS03460 PF02033 Ribosome-binding factor A VC395_RS03465 PF01509 TruB family pseudouridylate synthase (N terminal domain) VC395_RS03465 PF09157 Pseudouridine synthase II TruB, C-terminal VC395_RS03465 PF16198 VC395_RS03465 VC395_RS03470 PF00312 Ribosomal protein S15 VC395_RS03475 PF00013 KH domain VC395_RS03475 PF00575 S1 RNA binding domain VC395_RS03475 PF01138 3' exoribonuclease family, domain 1 VC395_RS03475 PF03725 3' exoribonuclease family, domain 2 VC395_RS03475 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VC395_RS03485 PF01047 MarR family VC395_RS03490 PF01554 MatE VC395_RS03495 PF01136 VC395_RS03495 VC395_RS03500 PF01136 VC395_RS03500 VC395_RS03505 PF00563 EAL domain VC395_RS03505 PF00990 GGDEF domain VC395_RS03505 PF08448 PAS fold VC395_RS03505 PF13188 PAS domain VC395_RS03510 PF02036 SCP-2 sterol transfer family VC395_RS03515 PF13527 Acetyltransferase (GNAT) domain VC395_RS03520 PF03603 DNA polymerase III psi subunit VC395_RS03525 PF00583 Acetyltransferase (GNAT) family VC395_RS03530 PF00563 EAL domain VC395_RS03530 PF00990 GGDEF domain VC395_RS03535 PF00009 Elongation factor Tu GTP binding domain VC395_RS03535 PF03144 Elongation factor Tu domain 2 VC395_RS03535 PF16658 VC395_RS03535 VC395_RS03540 PF00270 DEAD/DEAH box helicase VC395_RS03540 PF00271 Helicase conserved C-terminal domain VC395_RS03545 PF05175 Methyltransferase small domain VC395_RS03550 PF05525 VC395_RS03550 VC395_RS03555 PF00472 RF-1 domain VC395_RS03555 PF03462 PCRF domain VC395_RS03560 PF00152 tRNA synthetases class II (D, K and N) VC395_RS03560 PF01336 OB-fold nucleic acid binding domain VC395_RS03565 PF00158 Sigma-54 interaction domain VC395_RS03565 PF02954 Bacterial regulatory protein, Fis family VC395_RS03575 PF00248 Aldo/keto reductase family VC395_RS03580 PF02976 DNA mismatch repair enzyme MutH VC395_RS03585 PF00293 NUDIX domain VC395_RS03590 PF00391 PEP-utilising enzyme, mobile domain VC395_RS03590 PF01590 GAF domain VC395_RS03590 PF02896 PEP-utilising enzyme, TIM barrel domain VC395_RS03590 PF05524 PEP-utilising enzyme, N-terminal VC395_RS03595 PF01925 VC395_RS03595 VC395_RS03600 PF01790 VC395_RS03600 VC395_RS03605 PF00303 Thymidylate synthase VC395_RS03610 PF02690 VC395_RS03610 VC395_RS03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS03615 PF03466 LysR substrate binding domain VC395_RS03620 PF01022 Bacterial regulatory protein, arsR family VC395_RS03625 PF01649 Ribosomal protein S20 VC395_RS03630 PF03023 VC395_RS03630 VC395_RS03635 PF01687 Riboflavin kinase VC395_RS03635 PF06574 FAD synthetase VC395_RS03640 PF00133 tRNA synthetases class I (I, L, M and V) VC395_RS03640 PF06827 Zinc finger found in FPG and IleRS VC395_RS03640 PF08264 Anticodon-binding domain of tRNA VC395_RS03645 PF01252 VC395_RS03645 VC395_RS03650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC395_RS03655 PF02401 LytB protein VC395_RS03660 PF02554 VC395_RS03660 VC395_RS03660 PF13722 VC395_RS03660 VC395_RS03665 PF10973 VC395_RS03665 VC395_RS03670 PF00999 Sodium/hydrogen exchanger family VC395_RS03670 PF02254 TrkA-N domain VC395_RS03675 PF13580 SIS domain VC395_RS03680 PF03702 Uncharacterised protein family (UPF0075) VC395_RS03685 PF00933 Glycosyl hydrolase family 3 N terminal domain VC395_RS03690 PF00072 Response regulator receiver domain VC395_RS03690 PF04397 LytTr DNA-binding domain VC395_RS03695 PF06580 VC395_RS03695 VC395_RS03695 PF07694 5TMR of 5TMR-LYT VC395_RS03695 PF13492 GAF domain VC395_RS03700 PF00793 DAHP synthetase I family VC395_RS03705 PF01817 Chorismate mutase type II VC395_RS03705 PF02153 Prephenate dehydrogenase VC395_RS03710 PF07238 PilZ domain VC395_RS03715 PF00005 ABC transporter VC395_RS03715 PF12848 ABC transporter VC395_RS03720 PF01464 Transglycosylase SLT domain VC395_RS03720 PF14718 Soluble lytic murein transglycosylase L domain VC395_RS03725 PF01371 Trp repressor protein VC395_RS03730 PF01931 Protein of unknown function DUF84 VC395_RS03735 PF00563 EAL domain VC395_RS03735 PF00672 HAMP domain VC395_RS03735 PF00990 GGDEF domain VC395_RS03740 PF13416 Bacterial extracellular solute-binding protein VC395_RS03745 PF00800 Prephenate dehydratase VC395_RS03745 PF01817 Chorismate mutase type II VC395_RS03750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VC395_RS03755 PF13525 Outer membrane lipoprotein VC395_RS03760 PF00849 RNA pseudouridylate synthase VC395_RS03760 PF01479 S4 domain VC395_RS03765 PF02578 Multi-copper polyphenol oxidoreductase laccase VC395_RS03770 PF00004 ATPase family associated with various cellular activities (AAA) VC395_RS03770 PF02861 Clp amino terminal domain VC395_RS03770 PF07724 AAA domain (Cdc48 subfamily) VC395_RS03770 PF10431 C-terminal, D2-small domain, of ClpB protein VC395_RS03800 PF08921 Domain of unknown function (DUF1904) VC395_RS03805 PF00881 Nitroreductase family VC395_RS03810 PF12838 4Fe-4S dicluster domain VC395_RS03815 PF01136 VC395_RS03815 VC395_RS03815 PF16325 VC395_RS03815 VC395_RS03820 PF04381 Putative exonuclease, RdgC VC395_RS03825 PF00072 Response regulator receiver domain VC395_RS03825 PF00486 Transcriptional regulatory protein, C terminal VC395_RS03830 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS03830 PF00989 PAS fold VC395_RS03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS03830 PF11808 VC395_RS03830 VC395_RS03835 PF12849 PBP superfamily domain VC395_RS03840 PF02541 Ppx/GppA phosphatase family VC395_RS03845 PF02503 Polyphosphate kinase middle domain VC395_RS03845 PF13089 Polyphosphate kinase N-terminal domain VC395_RS03845 PF13090 Polyphosphate kinase C-terminal domain VC395_RS03850 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS03855 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS03860 PF00005 ABC transporter VC395_RS03865 PF01895 PhoU domain VC395_RS03870 PF03976 Polyphosphate kinase 2 (PPK2) VC395_RS03875 PF03932 CutC family VC395_RS03880 PF00578 AhpC/TSA family VC395_RS03880 PF10417 C-terminal domain of 1-Cys peroxiredoxin VC395_RS03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS03885 PF03466 LysR substrate binding domain VC395_RS03890 PF01274 Malate synthase VC395_RS03895 PF00463 Isocitrate lyase family VC395_RS03900 PF00571 CBS domain VC395_RS03905 PF02547 Queuosine biosynthesis protein VC395_RS03915 PF01702 Queuine tRNA-ribosyltransferase VC395_RS03920 PF02699 Preprotein translocase subunit VC395_RS03925 PF02355 Protein export membrane protein VC395_RS03925 PF07549 SecD/SecF GG Motif VC395_RS03925 PF13721 SecD export protein N-terminal TM region VC395_RS03930 PF02355 Protein export membrane protein VC395_RS03930 PF07549 SecD/SecF GG Motif VC395_RS03935 PF00459 Inositol monophosphatase family VC395_RS03940 PF00588 SpoU rRNA Methylase family VC395_RS03945 PF02082 Transcriptional regulator VC395_RS03950 PF00266 Aminotransferase class-V VC395_RS03955 PF01592 NifU-like N terminal domain VC395_RS03960 PF01521 Iron-sulphur cluster biosynthesis VC395_RS03965 PF00226 DnaJ domain VC395_RS03965 PF07743 HSCB C-terminal oligomerisation domain VC395_RS03970 PF00012 Hsp70 protein VC395_RS03975 PF00111 2Fe-2S iron-sulfur cluster binding domain VC395_RS03980 PF04384 Iron-sulphur cluster assembly VC395_RS03985 PF00883 Cytosol aminopeptidase family, catalytic domain VC395_RS03985 PF12404 VC395_RS03985 VC395_RS03990 PF00334 Nucleoside diphosphate kinase VC395_RS03995 PF04055 Radical SAM superfamily VC395_RS04000 PF13413 Helix-turn-helix domain VC395_RS04000 PF13464 VC395_RS04000 VC395_RS04005 PF04551 GcpE protein VC395_RS04010 PF03129 Anticodon binding domain VC395_RS04010 PF13393 Histidyl-tRNA synthetase VC395_RS04015 PF09976 Tetratricopeptide repeat VC395_RS04020 PF13360 PQQ-like domain VC395_RS04025 PF01926 50S ribosome-binding GTPase VC395_RS04025 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VC395_RS04035 PF07191 zinc-ribbons VC395_RS04040 PF02601 VC395_RS04040 VC395_RS04040 PF13742 VC395_RS04040 VC395_RS04045 PF00478 IMP dehydrogenase / GMP reductase domain VC395_RS04045 PF00571 CBS domain VC395_RS04050 PF00117 Glutamine amidotransferase class-I VC395_RS04050 PF00958 GMP synthase C terminal domain VC395_RS04050 PF02540 NAD synthase VC395_RS04055 PF00182 Chitinase class I VC395_RS04055 PF02839 Carbohydrate binding domain VC395_RS04060 PF01184 VC395_RS04060 VC395_RS04065 PF00550 Phosphopantetheine attachment site VC395_RS04065 PF00857 Isochorismatase family VC395_RS04070 PF00501 AMP-binding enzyme VC395_RS04070 PF13193 AMP-binding enzyme C-terminal domain VC395_RS04075 PF00425 chorismate binding enzyme VC395_RS04080 PF13561 Enoyl-(Acyl carrier protein) reductase VC395_RS04085 PF00668 Condensation domain VC395_RS04090 PF01497 Periplasmic binding protein VC395_RS04095 PF01032 FecCD transport family VC395_RS04100 PF01032 FecCD transport family VC395_RS04105 PF00005 ABC transporter VC395_RS04110 PF01648 4'-phosphopantetheinyl transferase superfamily VC395_RS04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS04115 PF03466 LysR substrate binding domain VC395_RS04120 PF00753 Metallo-beta-lactamase superfamily VC395_RS04120 PF14863 Alkyl sulfatase dimerisation VC395_RS04120 PF14864 Alkyl sulfatase C-terminal VC395_RS04125 PF01235 VC395_RS04125 VC395_RS04130 PF01266 FAD dependent oxidoreductase VC395_RS04135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS04135 PF03466 LysR substrate binding domain VC395_RS04140 PF08883 Dopa 4,5-dioxygenase family VC395_RS04150 PF00072 Response regulator receiver domain VC395_RS04150 PF12431 VC395_RS04150 VC395_RS04155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS04155 PF17203 VC395_RS04155 VC395_RS04160 PF03977 VC395_RS04160 VC395_RS04165 PF00364 Biotin-requiring enzyme VC395_RS04165 PF00682 HMGL-like VC395_RS04165 PF02436 Conserved carboxylase domain VC395_RS04170 PF04277 VC395_RS04170 VC395_RS04175 PF03390 VC395_RS04175 VC395_RS04180 PF08218 Citrate lyase ligase C-terminal domain VC395_RS04180 PF13673 Acetyltransferase (GNAT) domain VC395_RS04185 PF06857 VC395_RS04185 VC395_RS04190 PF03328 HpcH/HpaI aldolase/citrate lyase family VC395_RS04195 PF04223 Citrate lyase, alpha subunit (CitF) VC395_RS04200 PF03802 VC395_RS04200 VC395_RS04205 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VC395_RS04210 PF10000 ACT domain VC395_RS04210 PF13840 ACT domain VC395_RS04215 PF00588 SpoU rRNA Methylase family VC395_RS04220 PF11953 Domain of unknown function (DUF3470) VC395_RS04220 PF13187 4Fe-4S dicluster domain VC395_RS04240 PF04434 VC395_RS04240 VC395_RS04250 PF08378 VC395_RS04250 VC395_RS04255 PF00271 Helicase conserved C-terminal domain VC395_RS04255 PF04851 Type III restriction enzyme, res subunit VC395_RS04255 PF13091 PLD-like domain VC395_RS04260 PF13489 Methyltransferase domain VC395_RS04265 PF01381 Helix-turn-helix VC395_RS04270 PF07804 HipA-like C-terminal domain VC395_RS04270 PF07805 HipA-like N-terminal domain VC395_RS04280 PF00665 Integrase core domain VC395_RS04280 PF13565 VC395_RS04280 VC395_RS04285 PF13737 VC395_RS04285 VC395_RS04290 PF13737 VC395_RS04290 VC395_RS04295 PF00171 Aldehyde dehydrogenase family VC395_RS04300 PF00041 Fibronectin type III domain VC395_RS04300 PF10462 Peptidase M66 VC395_RS04300 PF12561 VC395_RS04300 VC395_RS04315 PF08534 Redoxin VC395_RS04320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS04325 PF00486 Transcriptional regulatory protein, C terminal VC395_RS04335 PF05946 Toxin-coregulated pilus subunit TcpA VC395_RS04345 PF10671 Toxin co-regulated pilus biosynthesis protein Q VC395_RS04370 PF00437 Type II/IV secretion system protein VC395_RS04375 PF00482 Type II secretion system (T2SS), protein F VC395_RS04380 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F VC395_RS04385 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family VC395_RS04390 PF01478 Type IV leader peptidase family VC395_RS04390 PF06750 VC395_RS04390 VC395_RS04395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS04395 PF00672 HAMP domain VC395_RS04395 PF02743 Cache domain VC395_RS04400 PF13531 Bacterial extracellular solute-binding protein VC395_RS04405 PF06271 VC395_RS04405 VC395_RS04410 PF01551 Peptidase family M23 VC395_RS04415 PF13505 Outer membrane protein beta-barrel domain VC395_RS04425 PF13322 VC395_RS04425 VC395_RS04425 PF13402 Peptidase M60-like family VC395_RS04435 PF00589 Phage integrase family VC395_RS04435 PF13356 Domain of unknown function (DUF4102) VC395_RS04440 PF01668 SmpB protein VC395_RS04445 PF03364 Polyketide cyclase / dehydrase and lipid transport VC395_RS04450 PF03658 RnfH family Ubiquitin VC395_RS04455 PF04355 SmpA / OmlA family VC395_RS04460 PF02463 RecF/RecN/SMC N terminal domain VC395_RS04465 PF01513 ATP-NAD kinase VC395_RS04470 PF01025 GrpE VC395_RS04475 PF00012 Hsp70 protein VC395_RS04480 PF00226 DnaJ domain VC395_RS04480 PF00684 DnaJ central domain VC395_RS04480 PF01556 DnaJ C terminal domain VC395_RS04485 PF13544 VC395_RS04485 VC395_RS04485 PF16732 VC395_RS04485 VC395_RS04490 PF12019 Type II transport protein GspH VC395_RS04490 PF13633 Prokaryotic N-terminal methylation site VC395_RS04505 PF13633 Prokaryotic N-terminal methylation site VC395_RS04515 PF03806 VC395_RS04515 VC395_RS04520 PF14437 VC395_RS04520 VC395_RS04530 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS04530 PF01464 Transglycosylase SLT domain VC395_RS04540 PF02769 AIR synthase related protein, C-terminal domain VC395_RS04540 PF13507 CobB/CobQ-like glutamine amidotransferase domain VC395_RS04545 PF01797 Transposase IS200 like VC395_RS04550 PF14056 VC395_RS04550 VC395_RS04555 PF06786 VC395_RS04555 VC395_RS04560 PF04391 VC395_RS04560 VC395_RS04570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VC395_RS04570 PF03129 Anticodon binding domain VC395_RS04570 PF04073 Aminoacyl-tRNA editing domain VC395_RS04575 PF01980 Uncharacterised protein family UPF0066 VC395_RS04580 PF01197 Ribosomal protein L31 VC395_RS04585 PF00444 Ribosomal protein L36 VC395_RS04590 PF03806 VC395_RS04590 VC395_RS04595 PF02639 VC395_RS04595 VC395_RS04605 PF13302 Acetyltransferase (GNAT) domain VC395_RS04610 PF11743 VC395_RS04610 VC395_RS04615 PF12069 VC395_RS04615 VC395_RS04620 PF04287 tRNA pseudouridine synthase C VC395_RS04625 PF00849 RNA pseudouridylate synthase VC395_RS04630 PF02779 Transketolase, pyrimidine binding domain VC395_RS04630 PF02780 Transketolase, C-terminal domain VC395_RS04630 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VC395_RS04635 PF00348 Polyprenyl synthetase VC395_RS04640 PF02609 Exonuclease VII small subunit VC395_RS04645 PF01618 VC395_RS04645 VC395_RS04650 PF00691 OmpA family VC395_RS04650 PF13677 VC395_RS04650 VC395_RS04655 PF02568 Thiamine biosynthesis protein (ThiI) VC395_RS04655 PF02926 THUMP domain VC395_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS04665 PF03466 LysR substrate binding domain VC395_RS04670 PF04241 VC395_RS04670 VC395_RS04675 PF01367 5'-3' exonuclease, C-terminal SAM fold VC395_RS04675 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VC395_RS04680 PF03641 Possible lysine decarboxylase VC395_RS04680 PF11892 Domain of unknown function (DUF3412) VC395_RS04680 PF14793 Domain of unknown function (DUF4478) VC395_RS04685 PF00990 GGDEF domain VC395_RS04690 PF13424 Tetratricopeptide repeat VC395_RS04695 PF14489 QueF-like protein VC395_RS04695 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VC395_RS04700 PF07348 Syd protein (SUKH-2) VC395_RS04705 PF10071 VC395_RS04705 VC395_RS04710 PF03180 NLPA lipoprotein VC395_RS04715 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS04720 PF00005 ABC transporter VC395_RS04720 PF09383 NIL domain VC395_RS04725 PF13242 HAD-hyrolase-like VC395_RS04730 PF00356 Bacterial regulatory proteins, lacI family VC395_RS04730 PF13377 Periplasmic binding protein-like domain VC395_RS04735 PF00367 phosphotransferase system, EIIB VC395_RS04735 PF02378 Phosphotransferase system, EIIC VC395_RS04740 PF00128 Alpha amylase, catalytic domain VC395_RS04765 PF16576 VC395_RS04765 VC395_RS04770 PF00873 AcrB/AcrD/AcrF family VC395_RS04775 PF01451 Low molecular weight phosphotyrosine protein phosphatase VC395_RS04780 PF02350 UDP-N-acetylglucosamine 2-epimerase VC395_RS04785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VC395_RS04785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VC395_RS04785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VC395_RS04790 PF00132 Bacterial transferase hexapeptide (six repeats) VC395_RS04795 PF00534 Glycosyl transferases group 1 VC395_RS04795 PF13439 Glycosyltransferase Family 4 VC395_RS04800 PF13440 VC395_RS04800 VC395_RS04805 PF13440 VC395_RS04805 VC395_RS04805 PF14667 Polysaccharide biosynthesis C-terminal domain VC395_RS04815 PF00132 Bacterial transferase hexapeptide (six repeats) VC395_RS04820 PF00501 AMP-binding enzyme VC395_RS04825 PF00534 Glycosyl transferases group 1 VC395_RS04835 PF03808 VC395_RS04835 VC395_RS04845 PF12708 Pectate lyase superfamily protein VC395_RS04850 PF16458 VC395_RS04850 VC395_RS04855 PF04932 VC395_RS04855 VC395_RS04865 PF02397 VC395_RS04865 VC395_RS04865 PF13727 CoA-binding domain VC395_RS04870 PF10082 VC395_RS04870 VC395_RS04875 PF02563 Polysaccharide biosynthesis/export protein VC395_RS04875 PF10531 SLBB domain VC395_RS04880 PF02706 Chain length determinant protein VC395_RS04880 PF13614 AAA domain VC395_RS04880 PF13807 VC395_RS04880 VC395_RS04890 PF04892 VC395_RS04890 VC395_RS04895 PF02588 VC395_RS04895 VC395_RS04900 PF00464 Serine hydroxymethyltransferase VC395_RS04910 PF04055 Radical SAM superfamily VC395_RS04910 PF16881 VC395_RS04910 VC395_RS04915 PF03099 Biotin/lipoate A/B protein ligase family VC395_RS04920 PF04359 Protein of unknown function (DUF493) VC395_RS04930 PF00768 D-alanyl-D-alanine carboxypeptidase VC395_RS04930 PF07943 Penicillin-binding protein 5, C-terminal domain VC395_RS04935 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel VC395_RS04935 PF05036 Sporulation related domain VC395_RS04940 PF01098 VC395_RS04940 VC395_RS04945 PF00905 Penicillin binding protein transpeptidase domain VC395_RS04945 PF03717 Penicillin-binding Protein dimerisation domain VC395_RS04950 PF02590 Predicted SPOUT methyltransferase VC395_RS04955 PF02410 Oligomerisation domain VC395_RS04960 PF06144 DNA polymerase III, delta subunit VC395_RS04960 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VC395_RS04965 PF04390 Lipopolysaccharide-assembly VC395_RS04970 PF00133 tRNA synthetases class I (I, L, M and V) VC395_RS04970 PF08264 Anticodon-binding domain of tRNA VC395_RS04970 PF13603 Leucyl-tRNA synthetase, Domain 2 VC395_RS04975 PF07295 VC395_RS04975 VC395_RS04980 PF00795 Carbon-nitrogen hydrolase VC395_RS04985 PF00571 CBS domain VC395_RS04985 PF03471 Transporter associated domain VC395_RS04990 PF02130 Uncharacterized protein family UPF0054 VC395_RS04995 PF02562 PhoH-like protein VC395_RS05000 PF00919 Uncharacterized protein family UPF0004 VC395_RS05000 PF01938 TRAM domain VC395_RS05000 PF04055 Radical SAM superfamily VC395_RS05005 PF01494 FAD binding domain VC395_RS05010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VC395_RS05015 PF00391 PEP-utilising enzyme, mobile domain VC395_RS05015 PF02896 PEP-utilising enzyme, TIM barrel domain VC395_RS05015 PF05524 PEP-utilising enzyme, N-terminal VC395_RS05020 PF00381 PTS HPr component phosphorylation site VC395_RS05030 PF00291 Pyridoxal-phosphate dependent enzyme VC395_RS05035 PF07264 Etoposide-induced protein 2 VC395_RS05040 PF04354 ZipA, C-terminal FtsZ-binding domain VC395_RS05045 PF00533 BRCA1 C Terminus (BRCT) domain VC395_RS05045 PF01653 NAD-dependent DNA ligase adenylation domain VC395_RS05045 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VC395_RS05045 PF03120 NAD-dependent DNA ligase OB-fold domain VC395_RS05045 PF12826 Helix-hairpin-helix motif VC395_RS05045 PF14520 Helix-hairpin-helix domain VC395_RS05050 PF13609 Gram-negative porin VC395_RS05060 PF13411 MerR HTH family regulatory protein VC395_RS05065 PF01957 NfeD-like C-terminal, partner-binding VC395_RS05070 PF01145 SPFH domain / Band 7 family VC395_RS05070 PF16200 VC395_RS05070 VC395_RS05075 PF00085 Thioredoxin VC395_RS05075 PF14559 Tetratricopeptide repeat VC395_RS05075 PF14561 Tetratricopeptide repeat VC395_RS05080 PF00106 short chain dehydrogenase VC395_RS05085 PF01370 NAD dependent epimerase/dehydratase family VC395_RS05085 PF08338 Domain of unknown function (DUF1731) VC395_RS05090 PF12850 Calcineurin-like phosphoesterase superfamily domain VC395_RS05095 PF10262 Rdx family VC395_RS05105 PF00486 Transcriptional regulatory protein, C terminal VC395_RS05110 PF00183 Hsp90 protein VC395_RS05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS05115 PF00406 Adenylate kinase VC395_RS05115 PF05191 Adenylate kinase, active site lid VC395_RS05120 PF00762 Ferrochelatase VC395_RS05125 PF00854 POT family VC395_RS05130 PF02357 Transcription termination factor nusG VC395_RS05135 PF00733 Asparagine synthase VC395_RS05135 PF13537 Glutamine amidotransferase domain VC395_RS05140 PF00999 Sodium/hydrogen exchanger family VC395_RS05140 PF02254 TrkA-N domain VC395_RS05145 PF00480 ROK family VC395_RS05150 PF01979 Amidohydrolase family VC395_RS05155 PF00367 phosphotransferase system, EIIB VC395_RS05155 PF02378 Phosphotransferase system, EIIC VC395_RS05160 PF00749 tRNA synthetases class I (E and Q), catalytic domain VC395_RS05160 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VC395_RS05170 PF01416 tRNA pseudouridine synthase VC395_RS05175 PF01039 Carboxyl transferase domain VC395_RS05180 PF02875 Mur ligase family, glutamate ligase domain VC395_RS05180 PF08245 Mur ligase middle domain VC395_RS05185 PF05036 Sporulation related domain VC395_RS05190 PF02674 VC395_RS05190 VC395_RS05195 PF13522 Glutamine amidotransferase domain VC395_RS05200 PF03553 VC395_RS05200 VC395_RS05200 PF13726 VC395_RS05200 VC395_RS05205 PF00929 Exonuclease VC395_RS05215 PF00691 OmpA family VC395_RS05220 PF10952 VC395_RS05220 VC395_RS05225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VC395_RS05230 PF00633 Helix-hairpin-helix motif VC395_RS05230 PF00730 HhH-GPD superfamily base excision DNA repair protein VC395_RS05230 PF10576 Iron-sulfur binding domain of endonuclease III VC395_RS05235 PF02508 VC395_RS05235 VC395_RS05240 PF04205 FMN-binding domain VC395_RS05245 PF03116 VC395_RS05245 VC395_RS05250 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VC395_RS05250 PF10531 SLBB domain VC395_RS05250 PF12838 4Fe-4S dicluster domain VC395_RS05250 PF13375 RnfC Barrel sandwich hybrid domain VC395_RS05255 PF04060 Putative Fe-S cluster VC395_RS05255 PF14697 4Fe-4S dicluster domain VC395_RS05260 PF02508 VC395_RS05260 VC395_RS05270 PF00271 Helicase conserved C-terminal domain VC395_RS05270 PF02151 UvrB/uvrC motif VC395_RS05270 PF04851 Type III restriction enzyme, res subunit VC395_RS05270 PF12344 Ultra-violet resistance protein B VC395_RS05280 PF00072 Response regulator receiver domain VC395_RS05280 PF00158 Sigma-54 interaction domain VC395_RS05280 PF02954 Bacterial regulatory protein, Fis family VC395_RS05285 PF01627 Hpt domain VC395_RS05290 PF01933 Uncharacterised protein family UPF0052 VC395_RS05295 PF04055 Radical SAM superfamily VC395_RS05295 PF06463 Molybdenum Cofactor Synthesis C VC395_RS05295 PF13353 4Fe-4S single cluster domain VC395_RS05300 PF00994 Probable molybdopterin binding domain VC395_RS05305 PF01967 MoaC family VC395_RS05310 PF02597 ThiS family VC395_RS05315 PF02391 MoaE protein VC395_RS05320 PF00990 GGDEF domain VC395_RS05325 PF00571 CBS domain VC395_RS05335 PF00122 E1-E2 ATPase VC395_RS05335 PF00403 Heavy-metal-associated domain VC395_RS05335 PF00702 haloacid dehalogenase-like hydrolase VC395_RS05340 PF01048 Phosphorylase superfamily VC395_RS05350 PF01588 Putative tRNA binding domain VC395_RS05350 PF09334 tRNA synthetases class I (M) VC395_RS05355 PF10609 ParA/MinD ATPase like VC395_RS05360 PF00485 Phosphoribulokinase / Uridine kinase family VC395_RS05365 PF05170 VC395_RS05365 VC395_RS05370 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VC395_RS05370 PF12557 Cob(I)alamin adenosyltransferase N terminal VC395_RS05375 PF01451 Low molecular weight phosphotyrosine protein phosphatase VC395_RS05380 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VC395_RS05385 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VC395_RS05390 PF11859 VC395_RS05390 VC395_RS05395 PF04542 Sigma-70 region 2 VC395_RS05395 PF08281 Sigma-70, region 4 VC395_RS05405 PF00108 Thiolase, N-terminal domain VC395_RS05405 PF02803 Thiolase, C-terminal domain VC395_RS05410 PF00378 Enoyl-CoA hydratase/isomerase family VC395_RS05410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VC395_RS05410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VC395_RS05415 PF00881 Nitroreductase family VC395_RS05420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS05420 PF03466 LysR substrate binding domain VC395_RS05425 PF00072 Response regulator receiver domain VC395_RS05435 PF04304 VC395_RS05435 VC395_RS05440 PF00156 Phosphoribosyl transferase domain VC395_RS05445 PF12168 VC395_RS05445 VC395_RS05445 PF12169 DNA polymerase III subunits gamma and tau domain III VC395_RS05445 PF12170 DNA polymerase III tau subunit V interacting with alpha VC395_RS05445 PF13177 DNA polymerase III, delta subunit VC395_RS05450 PF02575 YbaB/EbfC DNA-binding family VC395_RS05455 PF02132 RecR protein VC395_RS05455 PF13662 Toprim domain VC395_RS05460 PF03692 VC395_RS05460 VC395_RS05465 PF03692 VC395_RS05465 VC395_RS05470 PF00106 short chain dehydrogenase VC395_RS05475 PF01343 Peptidase family S49 VC395_RS05475 PF08496 VC395_RS05475 VC395_RS05480 PF00291 Pyridoxal-phosphate dependent enzyme VC395_RS05485 PF01037 AsnC family VC395_RS05485 PF13412 Winged helix-turn-helix DNA-binding VC395_RS05490 PF13622 Thioesterase-like superfamily VC395_RS05495 PF09619 Type III secretion system lipoprotein chaperone (YscW) VC395_RS05500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VC395_RS05510 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS05510 PF00990 GGDEF domain VC395_RS05515 PF01022 Bacterial regulatory protein, arsR family VC395_RS05520 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC395_RS05520 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VC395_RS05525 PF00782 Dual specificity phosphatase, catalytic domain VC395_RS05530 PF07690 Major Facilitator Superfamily VC395_RS05540 PF02517 CAAX protease self-immunity VC395_RS05545 PF01161 Phosphatidylethanolamine-binding protein VC395_RS05550 PF12833 Helix-turn-helix domain VC395_RS05565 PF01300 Telomere recombination VC395_RS05565 PF03481 Putative GTP-binding controlling metal-binding VC395_RS05570 PF01627 Hpt domain VC395_RS05575 PF00072 Response regulator receiver domain VC395_RS05575 PF08668 HDOD domain VC395_RS05580 PF00072 Response regulator receiver domain VC395_RS05585 PF04509 CheC-like family VC395_RS05590 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS05590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS05590 PF08448 PAS fold VC395_RS05595 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS05595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS05600 PF00072 Response regulator receiver domain VC395_RS05600 PF00563 EAL domain VC395_RS05605 PF00072 Response regulator receiver domain VC395_RS05605 PF13487 HD domain VC395_RS05610 PF00672 HAMP domain VC395_RS05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS05615 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein VC395_RS05620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC395_RS05625 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS05630 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS05630 PF12911 VC395_RS05630 VC395_RS05635 PF00005 ABC transporter VC395_RS05635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC395_RS05640 PF00005 ABC transporter VC395_RS05640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC395_RS05645 PF13409 Glutathione S-transferase, N-terminal domain VC395_RS05645 PF13410 Glutathione S-transferase, C-terminal domain VC395_RS05650 PF01515 Phosphate acetyl/butaryl transferase VC395_RS05650 PF07085 DRTGG domain VC395_RS05650 PF13500 AAA domain VC395_RS05655 PF00871 Acetokinase family VC395_RS05660 PF04217 VC395_RS05660 VC395_RS05665 PF09905 Uncharacterized conserved protein (DUF2132) VC395_RS05670 PF04392 ABC transporter substrate binding protein VC395_RS05675 PF02653 VC395_RS05675 VC395_RS05685 PF00990 GGDEF domain VC395_RS05695 PF02810 SEC-C motif VC395_RS05695 PF03695 Uncharacterised protein family (UPF0149) VC395_RS05700 PF03548 Outer membrane lipoprotein carrier protein LolA VC395_RS05705 PF00004 ATPase family associated with various cellular activities (AAA) VC395_RS05705 PF12002 MgsA AAA+ ATPase C terminal VC395_RS05705 PF16193 VC395_RS05705 VC395_RS05710 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VC395_RS05710 PF02403 Seryl-tRNA synthetase N-terminal domain VC395_RS05715 PF00202 Aminotransferase class-III VC395_RS05720 PF04055 Radical SAM superfamily VC395_RS05720 PF06968 Biotin and Thiamin Synthesis associated domain VC395_RS05725 PF00155 Aminotransferase class I and II VC395_RS05730 PF08241 Methyltransferase domain VC395_RS05735 PF13500 AAA domain VC395_RS05745 PF01435 Peptidase family M48 VC395_RS05750 PF12680 SnoaL-like domain VC395_RS05755 PF00106 short chain dehydrogenase VC395_RS05760 PF01593 Flavin containing amine oxidoreductase VC395_RS05765 PF07103 VC395_RS05765 VC395_RS05770 PF02353 Mycolic acid cyclopropane synthetase VC395_RS05775 PF11086 VC395_RS05775 VC395_RS05780 PF16036 VC395_RS05780 VC395_RS05785 PF12915 VC395_RS05785 VC395_RS05790 PF00206 Lyase VC395_RS05790 PF08328 Adenylosuccinate lyase C-terminal VC395_RS05795 PF04356 Protein of unknown function (DUF489) VC395_RS05800 PF03054 tRNA methyl transferase VC395_RS05805 PF00294 pfkB family carbohydrate kinase VC395_RS05810 PF00717 Peptidase S24-like VC395_RS05815 PF13693 Winged helix-turn-helix DNA-binding VC395_RS05820 PF02316 Mu DNA-binding domain VC395_RS05820 PF02914 Bacteriophage Mu transposase VC395_RS05820 PF09039 Mu DNA binding, I gamma subdomain VC395_RS05820 PF09299 Mu transposase, C-terminal VC395_RS05825 PF09077 Mu B transposition protein, C terminal VC395_RS05825 PF13401 AAA domain VC395_RS05850 PF11363 VC395_RS05850 VC395_RS05885 PF04448 VC395_RS05885 VC395_RS05890 PF06252 VC395_RS05890 VC395_RS05900 PF08765 Mor transcription activator family VC395_RS05905 PF05838 Glycosyl hydrolase 108 VC395_RS05905 PF09374 Predicted Peptidoglycan domain VC395_RS05920 PF01258 Prokaryotic dksA/traR C4-type zinc finger VC395_RS05925 PF10805 VC395_RS05925 VC395_RS05935 PF11985 VC395_RS05935 VC395_RS05945 PF06074 VC395_RS05945 VC395_RS05950 PF04233 VC395_RS05950 VC395_RS05960 PF16532 VC395_RS05960 VC395_RS05975 PF10123 VC395_RS05975 VC395_RS05980 PF10123 VC395_RS05980 VC395_RS05985 PF10124 VC395_RS05985 VC395_RS05995 PF07030 VC395_RS05995 VC395_RS06000 PF05069 VC395_RS06000 VC395_RS06010 PF10948 VC395_RS06010 VC395_RS06015 PF04984 Phage tail sheath protein VC395_RS06020 PF10618 VC395_RS06020 VC395_RS06025 PF10109 VC395_RS06025 VC395_RS06035 PF07157 VC395_RS06035 VC395_RS06040 PF05954 Phage late control gene D protein (GPD) VC395_RS06045 PF06890 Bacteriophage Mu Gp45 protein VC395_RS06050 PF07409 VC395_RS06050 VC395_RS06055 PF04865 VC395_RS06055 VC395_RS06060 PF10076 VC395_RS06060 VC395_RS06075 PF00816 H-NS histone family VC395_RS06080 PF03553 VC395_RS06080 VC395_RS06085 PF01634 ATP phosphoribosyltransferase VC395_RS06085 PF08029 HisG, C-terminal domain VC395_RS06090 PF00815 Histidinol dehydrogenase VC395_RS06095 PF00155 Aminotransferase class I and II VC395_RS06100 PF00475 Imidazoleglycerol-phosphate dehydratase VC395_RS06100 PF08645 Polynucleotide kinase 3 phosphatase VC395_RS06105 PF00117 Glutamine amidotransferase class-I VC395_RS06110 PF00977 Histidine biosynthesis protein VC395_RS06115 PF00977 Histidine biosynthesis protein VC395_RS06120 PF01502 Phosphoribosyl-AMP cyclohydrolase VC395_RS06120 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VC395_RS06125 PF00849 RNA pseudouridylate synthase VC395_RS06130 PF03971 Monomeric isocitrate dehydrogenase VC395_RS06135 PF00313 'Cold-shock' DNA-binding domain VC395_RS06140 PF02617 ATP-dependent Clp protease adaptor protein ClpS VC395_RS06145 PF00004 ATPase family associated with various cellular activities (AAA) VC395_RS06145 PF02861 Clp amino terminal domain VC395_RS06145 PF07724 AAA domain (Cdc48 subfamily) VC395_RS06145 PF10431 C-terminal, D2-small domain, of ClpB protein VC395_RS06150 PF02080 TrkA-C domain VC395_RS06150 PF06826 VC395_RS06150 VC395_RS06155 PF00462 Glutaredoxin VC395_RS06160 PF00465 Iron-containing alcohol dehydrogenase VC395_RS06165 PF01380 SIS domain VC395_RS06165 PF01418 Helix-turn-helix domain, rpiR family VC395_RS06170 PF00282 Pyridoxal-dependent decarboxylase conserved domain VC395_RS06180 PF03956 VC395_RS06180 VC395_RS06185 PF08668 HDOD domain VC395_RS06190 PF04993 TfoX N-terminal domain VC395_RS06190 PF04994 TfoX C-terminal domain VC395_RS06200 PF00072 Response regulator receiver domain VC395_RS06205 PF00027 Cyclic nucleotide-binding domain VC395_RS06205 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS06205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS06210 PF06097 VC395_RS06210 VC395_RS06215 PF00266 Aminotransferase class-V VC395_RS06220 PF14397 VC395_RS06220 VC395_RS06225 PF14400 VC395_RS06225 VC395_RS06225 PF14402 VC395_RS06225 VC395_RS06230 PF05618 Putative ATP-dependant zinc protease VC395_RS06235 PF08003 Protein of unknown function (DUF1698) VC395_RS06240 PF13649 Methyltransferase domain VC395_RS06245 PF01904 Protein of unknown function DUF72 VC395_RS06250 PF00152 tRNA synthetases class II (D, K and N) VC395_RS06250 PF01336 OB-fold nucleic acid binding domain VC395_RS06250 PF02938 GAD domain VC395_RS06255 PF00265 Thymidine kinase VC395_RS06260 PF00375 Sodium:dicarboxylate symporter family VC395_RS06275 PF10076 VC395_RS06275 VC395_RS06280 PF04865 VC395_RS06280 VC395_RS06285 PF07409 VC395_RS06285 VC395_RS06290 PF06890 Bacteriophage Mu Gp45 protein VC395_RS06295 PF05954 Phage late control gene D protein (GPD) VC395_RS06300 PF07157 VC395_RS06300 VC395_RS06310 PF10109 VC395_RS06310 VC395_RS06315 PF10618 VC395_RS06315 VC395_RS06320 PF04984 Phage tail sheath protein VC395_RS06325 PF10948 VC395_RS06325 VC395_RS06335 PF05069 VC395_RS06335 VC395_RS06340 PF07030 VC395_RS06340 VC395_RS06350 PF10124 VC395_RS06350 VC395_RS06355 PF10123 VC395_RS06355 VC395_RS06360 PF10123 VC395_RS06360 VC395_RS06375 PF16532 VC395_RS06375 VC395_RS06385 PF04233 VC395_RS06385 VC395_RS06390 PF06074 VC395_RS06390 VC395_RS06400 PF11985 VC395_RS06400 VC395_RS06410 PF10805 VC395_RS06410 VC395_RS06415 PF01258 Prokaryotic dksA/traR C4-type zinc finger VC395_RS06430 PF05838 Glycosyl hydrolase 108 VC395_RS06430 PF09374 Predicted Peptidoglycan domain VC395_RS06435 PF08765 Mor transcription activator family VC395_RS06445 PF06252 VC395_RS06445 VC395_RS06450 PF04448 VC395_RS06450 VC395_RS06485 PF11363 VC395_RS06485 VC395_RS06510 PF09077 Mu B transposition protein, C terminal VC395_RS06510 PF13401 AAA domain VC395_RS06515 PF02316 Mu DNA-binding domain VC395_RS06515 PF02914 Bacteriophage Mu transposase VC395_RS06515 PF09039 Mu DNA binding, I gamma subdomain VC395_RS06515 PF09299 Mu transposase, C-terminal VC395_RS06520 PF13693 Winged helix-turn-helix DNA-binding VC395_RS06525 PF00717 Peptidase S24-like VC395_RS06530 PF00375 Sodium:dicarboxylate symporter family VC395_RS06535 PF00290 Tryptophan synthase alpha chain VC395_RS06540 PF00291 Pyridoxal-phosphate dependent enzyme VC395_RS06545 PF00218 Indole-3-glycerol phosphate synthase VC395_RS06545 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VC395_RS06550 PF00591 Glycosyl transferase family, a/b domain VC395_RS06550 PF02885 Glycosyl transferase family, helical bundle domain VC395_RS06555 PF00117 Glutamine amidotransferase class-I VC395_RS06560 PF00425 chorismate binding enzyme VC395_RS06560 PF04715 Anthranilate synthase component I, N terminal region VC395_RS06565 PF08056 VC395_RS06565 VC395_RS06570 PF02811 PHP domain VC395_RS06575 PF01300 Telomere recombination VC395_RS06580 PF00849 RNA pseudouridylate synthase VC395_RS06580 PF01479 S4 domain VC395_RS06585 PF00005 ABC transporter VC395_RS06590 PF00005 ABC transporter VC395_RS06590 PF00664 ABC transporter transmembrane region VC395_RS06595 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC395_RS06600 PF10014 2OG-Fe dioxygenase VC395_RS06605 PF00266 Aminotransferase class-V VC395_RS06610 PF00990 GGDEF domain VC395_RS06615 PF02698 DUF218 domain VC395_RS06620 PF11872 VC395_RS06620 VC395_RS06625 PF00390 Malic enzyme, N-terminal domain VC395_RS06625 PF03949 Malic enzyme, NAD binding domain VC395_RS06635 PF01259 SAICAR synthetase VC395_RS06650 PF08238 Sel1 repeat VC395_RS06655 PF00691 OmpA family VC395_RS06655 PF13488 VC395_RS06655 VC395_RS06660 PF10979 VC395_RS06660 VC395_RS06665 PF11813 VC395_RS06665 VC395_RS06670 PF01565 FAD binding domain VC395_RS06670 PF02913 FAD linked oxidases, C-terminal domain VC395_RS06670 PF13183 4Fe-4S dicluster domain VC395_RS06675 PF04191 Phospholipid methyltransferase VC395_RS06680 PF00089 Trypsin VC395_RS06685 PF12119 VC395_RS06685 VC395_RS06690 PF00221 Aromatic amino acid lyase VC395_RS06695 PF01175 Urocanase VC395_RS06700 PF00491 Arginase family VC395_RS06705 PF01979 Amidohydrolase family VC395_RS06710 PF00392 Bacterial regulatory proteins, gntR family VC395_RS06710 PF07702 UTRA domain VC395_RS06715 PF11383 VC395_RS06715 VC395_RS06720 PF04269 Protein of unknown function, DUF440 VC395_RS06725 PF01132 Elongation factor P (EF-P) OB domain VC395_RS06725 PF08207 Elongation factor P (EF-P) KOW-like domain VC395_RS06725 PF09285 Elongation factor P, C-terminal VC395_RS06730 PF01909 Nucleotidyltransferase domain VC395_RS06735 PF00563 EAL domain VC395_RS06735 PF02378 Phosphotransferase system, EIIC VC395_RS06740 PF00136 DNA polymerase family B VC395_RS06740 PF03104 DNA polymerase family B, exonuclease domain VC395_RS06745 PF00072 Response regulator receiver domain VC395_RS06745 PF00196 Bacterial regulatory proteins, luxR family VC395_RS06750 PF01541 GIY-YIG catalytic domain VC395_RS06750 PF02151 UvrB/uvrC motif VC395_RS06750 PF08459 UvrC Helix-hairpin-helix N-terminal VC395_RS06750 PF14520 Helix-hairpin-helix domain VC395_RS06755 PF01066 CDP-alcohol phosphatidyltransferase VC395_RS06780 PF00990 GGDEF domain VC395_RS06780 PF01814 Hemerythrin HHE cation binding domain VC395_RS06785 PF00583 Acetyltransferase (GNAT) family VC395_RS06790 PF01409 tRNA synthetases class II core domain (F) VC395_RS06790 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VC395_RS06795 PF01588 Putative tRNA binding domain VC395_RS06795 PF03147 Ferredoxin-fold anticodon binding domain VC395_RS06795 PF03483 B3/4 domain VC395_RS06795 PF03484 tRNA synthetase B5 domain VC395_RS06800 PF00216 Bacterial DNA-binding protein VC395_RS06810 PF04607 Region found in RelA / SpoT proteins VC395_RS06815 PF05724 Thiopurine S-methyltransferase (TPMT) VC395_RS06825 PF02222 ATP-grasp domain VC395_RS06830 PF03547 VC395_RS06830 VC395_RS06835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VC395_RS06835 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VC395_RS06840 PF04172 VC395_RS06840 VC395_RS06845 PF03788 VC395_RS06845 VC395_RS06850 PF00929 Exonuclease VC395_RS06850 PF08411 Exonuclease C-terminal VC395_RS06855 PF00375 Sodium:dicarboxylate symporter family VC395_RS06860 PF01641 SelR domain VC395_RS06865 PF02277 Phosphoribosyltransferase VC395_RS06870 PF02654 VC395_RS06870 VC395_RS06875 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VC395_RS06880 PF00300 Histidine phosphatase superfamily (branch 1) VC395_RS06885 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VC395_RS06890 PF01032 FecCD transport family VC395_RS06895 PF00005 ABC transporter VC395_RS06900 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VC395_RS06905 PF11042 VC395_RS06905 VC395_RS06910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS06910 PF00672 HAMP domain VC395_RS06910 PF17200 VC395_RS06910 VC395_RS06915 PF13740 ACT domain VC395_RS06920 PF13084 VC395_RS06920 VC395_RS06925 PF00994 Probable molybdopterin binding domain VC395_RS06935 PF00111 2Fe-2S iron-sulfur cluster binding domain VC395_RS06940 PF00268 Ribonucleotide reductase, small chain VC395_RS06945 PF00317 Ribonucleotide reductase, all-alpha domain VC395_RS06945 PF02867 Ribonucleotide reductase, barrel domain VC395_RS06945 PF03477 ATP cone domain VC395_RS06950 PF13489 Methyltransferase domain VC395_RS06955 PF00521 DNA gyrase/topoisomerase IV, subunit A VC395_RS06955 PF03989 DNA gyrase C-terminal domain, beta-propeller VC395_RS06960 PF00581 Rhodanese-like domain VC395_RS06965 PF12833 Helix-turn-helix domain VC395_RS06970 PF07690 Major Facilitator Superfamily VC395_RS06980 PF00925 GTP cyclohydrolase II VC395_RS06985 PF09375 Imelysin VC395_RS06990 PF06537 VC395_RS06990 VC395_RS06995 PF09375 Imelysin VC395_RS07000 PF07433 VC395_RS07000 VC395_RS07005 PF01471 Putative peptidoglycan binding domain VC395_RS07005 PF03734 L,D-transpeptidase catalytic domain VC395_RS07010 PF05951 VC395_RS07010 VC395_RS07015 PF00753 Metallo-beta-lactamase superfamily VC395_RS07020 PF11201 VC395_RS07020 VC395_RS07030 PF03480 Bacterial extracellular solute-binding protein, family 7 VC395_RS07035 PF04290 VC395_RS07035 VC395_RS07040 PF06808 VC395_RS07040 VC395_RS07045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS07045 PF07730 Histidine kinase VC395_RS07045 PF17200 VC395_RS07045 VC395_RS07050 PF00072 Response regulator receiver domain VC395_RS07050 PF00196 Bacterial regulatory proteins, luxR family VC395_RS07055 PF01047 MarR family VC395_RS07060 PF02028 BCCT family transporter VC395_RS07065 PF01522 Polysaccharide deacetylase VC395_RS07065 PF02839 Carbohydrate binding domain VC395_RS07070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC395_RS07075 PF02378 Phosphotransferase system, EIIC VC395_RS07080 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VC395_RS07085 PF02056 Family 4 glycosyl hydrolase VC395_RS07085 PF11975 Family 4 glycosyl hydrolase C-terminal domain VC395_RS07090 PF04794 YdjC-like protein VC395_RS07095 PF00356 Bacterial regulatory proteins, lacI family VC395_RS07095 PF13377 Periplasmic binding protein-like domain VC395_RS07100 PF13632 Glycosyl transferase family group 2 VC395_RS07105 PF04349 Periplasmic glucan biosynthesis protein, MdoG VC395_RS07110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS07110 PF00672 HAMP domain VC395_RS07110 PF02743 Cache domain VC395_RS07115 PF00929 Exonuclease VC395_RS07120 PF00027 Cyclic nucleotide-binding domain VC395_RS07120 PF00571 CBS domain VC395_RS07120 PF03445 VC395_RS07120 VC395_RS07120 PF10335 VC395_RS07120 VC395_RS07125 PF00155 Aminotransferase class I and II VC395_RS07135 PF01966 HD domain VC395_RS07140 PF08543 Phosphomethylpyrimidine kinase VC395_RS07145 PF00152 tRNA synthetases class II (D, K and N) VC395_RS07145 PF01336 OB-fold nucleic acid binding domain VC395_RS07150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS07150 PF00672 HAMP domain VC395_RS07155 PF01242 6-pyruvoyl tetrahydropterin synthase VC395_RS07160 PF03313 VC395_RS07160 VC395_RS07160 PF03315 Serine dehydratase beta chain VC395_RS07165 PF01490 VC395_RS07165 VC395_RS07170 PF00293 NUDIX domain VC395_RS07175 PF00425 chorismate binding enzyme VC395_RS07175 PF04715 Anthranilate synthase component I, N terminal region VC395_RS07180 PF05681 VC395_RS07180 VC395_RS07180 PF05683 Fumarase C-terminus VC395_RS07190 PF04317 VC395_RS07190 VC395_RS07195 PF05128 VC395_RS07195 VC395_RS07200 PF00158 Sigma-54 interaction domain VC395_RS07200 PF00989 PAS fold VC395_RS07205 PF13302 Acetyltransferase (GNAT) domain VC395_RS07210 PF11163 VC395_RS07210 VC395_RS07215 PF00892 EamA-like transporter family VC395_RS07220 PF00842 Alanine racemase, C-terminal domain VC395_RS07220 PF01168 Alanine racemase, N-terminal domain VC395_RS07225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS07225 PF00672 HAMP domain VC395_RS07225 PF12729 VC395_RS07225 VC395_RS07230 PF00939 Sodium:sulfate symporter transmembrane region VC395_RS07235 PF00027 Cyclic nucleotide-binding domain VC395_RS07235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS07240 PF00072 Response regulator receiver domain VC395_RS07245 PF04393 VC395_RS07245 VC395_RS07250 PF06629 VC395_RS07250 VC395_RS07255 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS07255 PF00672 HAMP domain VC395_RS07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS07260 PF00072 Response regulator receiver domain VC395_RS07260 PF00486 Transcriptional regulatory protein, C terminal VC395_RS07265 PF00912 Transglycosylase VC395_RS07270 PF04400 VC395_RS07270 VC395_RS07275 PF02579 Dinitrogenase iron-molybdenum cofactor VC395_RS07285 PF13407 Periplasmic binding protein domain VC395_RS07295 PF00005 ABC transporter VC395_RS07300 PF02653 VC395_RS07300 VC395_RS07305 PF13505 Outer membrane protein beta-barrel domain VC395_RS07310 PF07313 Protein of unknown function (DUF1460) VC395_RS07315 PF01970 VC395_RS07315 VC395_RS07320 PF07331 VC395_RS07320 VC395_RS07325 PF03401 Tripartite tricarboxylate transporter family receptor VC395_RS07330 PF00392 Bacterial regulatory proteins, gntR family VC395_RS07330 PF07729 FCD domain VC395_RS07335 PF13714 Phosphoenolpyruvate phosphomutase VC395_RS07340 PF00285 Citrate synthase VC395_RS07345 PF00330 Aconitase family (aconitate hydratase) VC395_RS07345 PF00694 Aconitase C-terminal domain VC395_RS07350 PF04303 PrpF protein VC395_RS07355 PF00501 AMP-binding enzyme VC395_RS07355 PF13193 AMP-binding enzyme C-terminal domain VC395_RS07355 PF16177 VC395_RS07355 VC395_RS07360 PF00583 Acetyltransferase (GNAT) family VC395_RS07365 PF00293 NUDIX domain VC395_RS07370 PF01546 Peptidase family M20/M25/M40 VC395_RS07370 PF07687 Peptidase dimerisation domain VC395_RS07375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VC395_RS07375 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal VC395_RS07380 PF04209 homogentisate 1,2-dioxygenase VC395_RS07385 PF01557 Fumarylacetoacetate (FAA) hydrolase family VC395_RS07390 PF13417 Glutathione S-transferase, N-terminal domain VC395_RS07390 PF14497 Glutathione S-transferase, C-terminal domain VC395_RS07395 PF00072 Response regulator receiver domain VC395_RS07395 PF13487 HD domain VC395_RS07400 PF00072 Response regulator receiver domain VC395_RS07400 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS07400 PF01627 Hpt domain VC395_RS07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS07400 PF08448 PAS fold VC395_RS07405 PF08534 Redoxin VC395_RS07415 PF00990 GGDEF domain VC395_RS07415 PF07494 Two component regulator propeller VC395_RS07415 PF07495 Y_Y_Y domain VC395_RS07420 PF10672 S-adenosylmethionine-dependent methyltransferase VC395_RS07425 PF00708 Acylphosphatase VC395_RS07430 PF04358 DsrC like protein VC395_RS07435 PF01027 Inhibitor of apoptosis-promoting Bax1 VC395_RS07440 PF00005 ABC transporter VC395_RS07445 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS07450 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS07455 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS07460 PF10414 Sirohaem synthase dimerisation region VC395_RS07460 PF13241 Putative NAD(P)-binding VC395_RS07465 PF08282 haloacid dehalogenase-like hydrolase VC395_RS07470 PF04055 Radical SAM superfamily VC395_RS07470 PF13394 4Fe-4S single cluster domain VC395_RS07475 PF06508 Queuosine biosynthesis protein QueC VC395_RS07480 PF00990 GGDEF domain VC395_RS07480 PF13424 Tetratricopeptide repeat VC395_RS07480 PF13432 Tetratricopeptide repeat VC395_RS07490 PF09084 NMT1/THI5 like VC395_RS07495 PF00990 GGDEF domain VC395_RS07505 PF00990 GGDEF domain VC395_RS07510 PF00012 Hsp70 protein VC395_RS07510 PF12531 VC395_RS07510 VC395_RS07515 PF00012 Hsp70 protein VC395_RS07530 PF00990 GGDEF domain VC395_RS07530 PF03924 CHASE domain VC395_RS07535 PF00929 Exonuclease VC395_RS07545 PF05099 Tellurite resistance protein TerB VC395_RS07560 PF00270 DEAD/DEAH box helicase VC395_RS07560 PF00271 Helicase conserved C-terminal domain VC395_RS07560 PF04408 Helicase associated domain (HA2) VC395_RS07560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VC395_RS07560 PF11898 VC395_RS07560 VC395_RS07565 PF13505 Outer membrane protein beta-barrel domain VC395_RS07570 PF00012 Hsp70 protein VC395_RS07575 PF03099 Biotin/lipoate A/B protein ligase family VC395_RS07575 PF10437 Bacterial lipoate protein ligase C-terminus VC395_RS07580 PF10013 VC395_RS07580 VC395_RS07585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS07585 PF03466 LysR substrate binding domain VC395_RS07590 PF07690 Major Facilitator Superfamily VC395_RS07595 PF00875 DNA photolyase VC395_RS07595 PF03441 FAD binding domain of DNA photolyase VC395_RS07600 PF00893 Small Multidrug Resistance protein VC395_RS07605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS07610 PF00072 Response regulator receiver domain VC395_RS07620 PF01584 CheW-like domain VC395_RS07620 PF01627 Hpt domain VC395_RS07620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS07620 PF02895 Signal transducing histidine kinase, homodimeric domain VC395_RS07625 PF00072 Response regulator receiver domain VC395_RS07630 PF01739 CheR methyltransferase, SAM binding domain VC395_RS07630 PF03705 CheR methyltransferase, all-alpha domain VC395_RS07640 PF00072 Response regulator receiver domain VC395_RS07640 PF01339 CheB methylesterase VC395_RS07645 PF01584 CheW-like domain VC395_RS07650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS07655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS07655 PF00672 HAMP domain VC395_RS07660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS07660 PF08447 PAS fold VC395_RS07660 PF13426 PAS domain VC395_RS07665 PF00270 DEAD/DEAH box helicase VC395_RS07665 PF00271 Helicase conserved C-terminal domain VC395_RS07670 PF00440 Bacterial regulatory proteins, tetR family VC395_RS07670 PF14246 AefR-like transcriptional repressor, C-terminal region VC395_RS07675 PF02321 Outer membrane efflux protein VC395_RS07680 PF13437 HlyD family secretion protein VC395_RS07680 PF13533 Biotin-lipoyl like VC395_RS07685 PF07690 Major Facilitator Superfamily VC395_RS07690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS07690 PF00672 HAMP domain VC395_RS07695 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VC395_RS07700 PF05638 Protein of unknown function (DUF796) VC395_RS07705 PF05954 Phage late control gene D protein (GPD) VC395_RS07705 PF16671 VC395_RS07705 VC395_RS07710 PF13503 VC395_RS07710 VC395_RS07715 PF01764 Lipase (class 3) VC395_RS07725 PF11153 VC395_RS07725 VC395_RS07730 PF01810 VC395_RS07730 VC395_RS07735 PF01235 VC395_RS07735 VC395_RS07750 PF13416 Bacterial extracellular solute-binding protein VC395_RS07755 PF13416 Bacterial extracellular solute-binding protein VC395_RS07760 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS07765 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS07770 PF00005 ABC transporter VC395_RS07770 PF08402 TOBE domain VC395_RS07780 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VC395_RS07785 PF11205 VC395_RS07785 VC395_RS07790 PF01171 PP-loop family VC395_RS07795 PF00582 Universal stress protein family VC395_RS07800 PF00027 Cyclic nucleotide-binding domain VC395_RS07800 PF13545 Crp-like helix-turn-helix domain VC395_RS07805 PF13386 VC395_RS07805 VC395_RS07810 PF03597 VC395_RS07810 VC395_RS07815 PF00122 E1-E2 ATPase VC395_RS07815 PF00403 Heavy-metal-associated domain VC395_RS07815 PF00702 haloacid dehalogenase-like hydrolase VC395_RS07815 PF12156 VC395_RS07815 VC395_RS07820 PF05751 VC395_RS07820 VC395_RS07825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VC395_RS07825 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VC395_RS07830 PF05545 VC395_RS07830 VC395_RS07835 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO VC395_RS07840 PF00115 Cytochrome C and Quinol oxidase polypeptide I VC395_RS07850 PF08495 VC395_RS07850 VC395_RS07850 PF10442 VC395_RS07850 VC395_RS07855 PF00072 Response regulator receiver domain VC395_RS07855 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS07860 PF00005 ABC transporter VC395_RS07860 PF00664 ABC transporter transmembrane region VC395_RS07860 PF03412 Peptidase C39 family VC395_RS07865 PF13437 HlyD family secretion protein VC395_RS07870 PF00005 ABC transporter VC395_RS07870 PF00664 ABC transporter transmembrane region VC395_RS07875 PF11647 C-terminal region of Pasteurella multocida toxin residues 569-1285 VC395_RS07875 PF11713 Peptidase C80 family VC395_RS07875 PF12146 Putative lysophospholipase VC395_RS07875 PF16671 VC395_RS07875 VC395_RS07880 PF01376 Heat-labile enterotoxin beta chain VC395_RS07885 PF01375 Heat-labile enterotoxin alpha chain VC395_RS07890 PF05707 Zonular occludens toxin (Zot) VC395_RS07895 PF10734 VC395_RS07895 VC395_RS07900 PF16710 VC395_RS07900 VC395_RS07910 PF07459 VC395_RS07910 VC395_RS07915 PF02486 VC395_RS07915 VC395_RS07920 PF01381 Helix-turn-helix VC395_RS07925 PF07459 VC395_RS07925 VC395_RS07930 PF02486 VC395_RS07930 VC395_RS07935 PF01381 Helix-turn-helix VC395_RS07940 PF12375 VC395_RS07940 VC395_RS07960 PF05144 VC395_RS07960 VC395_RS07960 PF05155 VC395_RS07960 VC395_RS07965 PF01381 Helix-turn-helix VC395_RS07990 PF05144 VC395_RS07990 VC395_RS07990 PF05155 VC395_RS07990 VC395_RS07995 PF01381 Helix-turn-helix VC395_RS08020 PF05144 VC395_RS08020 VC395_RS08020 PF05155 VC395_RS08020 VC395_RS08025 PF01381 Helix-turn-helix VC395_RS08035 PF12321 VC395_RS08035 VC395_RS08040 PF06303 Organiser of macrodomain of Terminus of chromosome VC395_RS08045 PF05362 Lon protease (S16) C-terminal proteolytic domain VC395_RS08045 PF13654 AAA domain VC395_RS08050 PF07977 FabA-like domain VC395_RS08055 PF04957 Ribosome modulation factor VC395_RS08060 PF11949 VC395_RS08060 VC395_RS08065 PF00005 ABC transporter VC395_RS08065 PF12848 ABC transporter VC395_RS08065 PF16326 VC395_RS08065 VC395_RS08070 PF05768 Glutaredoxin-like domain (DUF836) VC395_RS08075 PF01170 Putative RNA methylase family UPF0020 VC395_RS08075 PF02926 THUMP domain VC395_RS08075 PF10672 S-adenosylmethionine-dependent methyltransferase VC395_RS08080 PF07126 VC395_RS08080 VC395_RS08085 PF01180 Dihydroorotate dehydrogenase VC395_RS08090 PF05088 VC395_RS08090 VC395_RS08095 PF05088 VC395_RS08095 VC395_RS08100 PF11197 VC395_RS08100 VC395_RS08105 PF01433 Peptidase family M1 VC395_RS08105 PF11940 Domain of unknown function (DUF3458) VC395_RS08115 PF00595 PDZ domain (Also known as DHR or GLGF) VC395_RS08115 PF03572 Peptidase family S41 VC395_RS08115 PF08180 VC395_RS08115 VC395_RS08115 PF11818 VC395_RS08115 VC395_RS08120 PF04352 ProQ/FINO family VC395_RS08125 PF13185 GAF domain VC395_RS08130 PF00005 ABC transporter VC395_RS08130 PF00664 ABC transporter transmembrane region VC395_RS08135 PF04403 VC395_RS08135 VC395_RS08140 PF02470 VC395_RS08140 VC395_RS08145 PF01189 NOL1/NOP2/sun family VC395_RS08145 PF13636 pre-rRNA processing and ribosome biogenesis VC395_RS08145 PF17125 VC395_RS08145 VC395_RS08150 PF13509 S1 domain VC395_RS08160 PF14539 Domain of unknown function (DUF4442) VC395_RS08165 PF00793 DAHP synthetase I family VC395_RS08170 PF04461 Protein of unknown function (DUF520) VC395_RS08175 PF02146 Sir2 family VC395_RS08185 PF01292 Prokaryotic cytochrome b561 VC395_RS08190 PF13247 4Fe-4S dicluster domain VC395_RS08195 PF00384 Molybdopterin oxidoreductase VC395_RS08195 PF01568 Molydopterin dinucleotide binding domain VC395_RS08195 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VC395_RS08200 PF10518 TAT (twin-arginine translocation) pathway signal sequence VC395_RS08205 PF02613 Nitrate reductase delta subunit VC395_RS08210 PF12838 4Fe-4S dicluster domain VC395_RS08210 PF13187 4Fe-4S dicluster domain VC395_RS08215 PF11748 VC395_RS08215 VC395_RS08220 PF11749 VC395_RS08220 VC395_RS08225 PF02634 FdhD/NarQ family VC395_RS08230 PF00005 ABC transporter VC395_RS08230 PF12848 ABC transporter VC395_RS08235 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS08235 PF00672 HAMP domain VC395_RS08235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS08235 PF17202 VC395_RS08235 VC395_RS08240 PF00072 Response regulator receiver domain VC395_RS08240 PF00158 Sigma-54 interaction domain VC395_RS08240 PF02954 Bacterial regulatory protein, Fis family VC395_RS08245 PF12849 PBP superfamily domain VC395_RS08250 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS08255 PF00005 ABC transporter VC395_RS08260 PF12804 MobA-like NTP transferase domain VC395_RS08265 PF00994 Probable molybdopterin binding domain VC395_RS08265 PF03205 Molybdopterin guanine dinucleotide synthesis protein B VC395_RS08265 PF03453 MoeA N-terminal region (domain I and II) VC395_RS08265 PF03454 MoeA C-terminal region (domain IV) VC395_RS08270 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS08285 PF11173 VC395_RS08285 VC395_RS08290 PF00480 ROK family VC395_RS08295 PF03942 VC395_RS08295 VC395_RS08300 PF04116 VC395_RS08300 VC395_RS08305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS08310 PF00877 NlpC/P60 family VC395_RS08315 PF12290 VC395_RS08315 VC395_RS08320 PF03881 Fructosamine kinase VC395_RS08325 PF14255 VC395_RS08325 VC395_RS08330 PF01554 MatE VC395_RS08335 PF11279 VC395_RS08335 VC395_RS08340 PF01068 ATP dependent DNA ligase domain VC395_RS08340 PF14743 DNA ligase OB-like domain VC395_RS08350 PF03544 Gram-negative bacterial TonB protein C-terminal VC395_RS08355 PF02472 Biopolymer transport protein ExbD/TolR VC395_RS08360 PF01618 VC395_RS08360 VC395_RS08365 PF01618 VC395_RS08365 VC395_RS08370 PF11932 VC395_RS08370 VC395_RS08375 PF13416 Bacterial extracellular solute-binding protein VC395_RS08380 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS08385 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS08390 PF00005 ABC transporter VC395_RS08395 PF00455 VC395_RS08395 VC395_RS08395 PF08220 DeoR-like helix-turn-helix domain VC395_RS08400 PF03009 Glycerophosphoryl diester phosphodiesterase family VC395_RS08405 PF04074 Domain of unknown function (DUF386) VC395_RS08410 PF01042 Endoribonuclease L-PSP VC395_RS08415 PF00356 Bacterial regulatory proteins, lacI family VC395_RS08415 PF13377 Periplasmic binding protein-like domain VC395_RS08420 PF00232 Glycosyl hydrolase family 1 VC395_RS08425 PF00141 Peroxidase VC395_RS08430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS08430 PF03466 LysR substrate binding domain VC395_RS08435 PF00753 Metallo-beta-lactamase superfamily VC395_RS08440 PF16576 VC395_RS08440 VC395_RS08445 PF02321 Outer membrane efflux protein VC395_RS08450 PF02687 VC395_RS08450 VC395_RS08450 PF12704 MacB-like periplasmic core domain VC395_RS08455 PF02687 VC395_RS08455 VC395_RS08455 PF12704 MacB-like periplasmic core domain VC395_RS08460 PF00005 ABC transporter VC395_RS08465 PF02322 VC395_RS08465 VC395_RS08470 PF01654 VC395_RS08470 VC395_RS08480 PF00206 Lyase VC395_RS08480 PF10415 Fumarase C C-terminus VC395_RS08485 PF04342 VC395_RS08485 VC395_RS08490 PF09900 VC395_RS08490 VC395_RS08495 PF04266 ASCH domain VC395_RS08500 PF03279 VC395_RS08500 VC395_RS08510 PF00501 AMP-binding enzyme VC395_RS08515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS08515 PF03466 LysR substrate binding domain VC395_RS08520 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains VC395_RS08525 PF10070 VC395_RS08525 VC395_RS08530 PF00080 Copper/zinc superoxide dismutase (SODC) VC395_RS08535 PF12796 Ankyrin repeats (3 copies) VC395_RS08540 PF00199 Catalase VC395_RS08540 PF06628 Catalase-related immune-responsive VC395_RS08545 PF04224 VC395_RS08545 VC395_RS08550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS08550 PF03466 LysR substrate binding domain VC395_RS08555 PF03306 Alpha-acetolactate decarboxylase VC395_RS08560 PF00205 Thiamine pyrophosphate enzyme, central domain VC395_RS08560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VC395_RS08560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VC395_RS08565 PF13561 Enoyl-(Acyl carrier protein) reductase VC395_RS08570 PF00563 EAL domain VC395_RS08575 PF00990 GGDEF domain VC395_RS08580 PF01263 Aldose 1-epimerase VC395_RS08585 PF00288 GHMP kinases N terminal domain VC395_RS08585 PF08544 GHMP kinases C terminal VC395_RS08585 PF10509 Galactokinase galactose-binding signature VC395_RS08590 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VC395_RS08590 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VC395_RS08595 PF07690 Major Facilitator Superfamily VC395_RS08600 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS08620 PF10881 VC395_RS08620 VC395_RS08630 PF00072 Response regulator receiver domain VC395_RS08630 PF01584 CheW-like domain VC395_RS08635 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS08640 PF00072 Response regulator receiver domain VC395_RS08640 PF12431 VC395_RS08640 VC395_RS08645 PF00989 PAS fold VC395_RS08645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS08645 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VC395_RS08645 PF17203 VC395_RS08645 VC395_RS08655 PF02321 Outer membrane efflux protein VC395_RS08660 PF16576 VC395_RS08660 VC395_RS08665 PF12698 ABC-2 family transporter protein VC395_RS08670 PF12698 ABC-2 family transporter protein VC395_RS08675 PF13671 AAA domain VC395_RS08680 PF04204 Homoserine O-succinyltransferase VC395_RS08685 PF13424 Tetratricopeptide repeat VC395_RS08685 PF13432 Tetratricopeptide repeat VC395_RS08695 PF05971 Protein of unknown function (DUF890) VC395_RS08700 PF01797 Transposase IS200 like VC395_RS08705 PF05971 Protein of unknown function (DUF890) VC395_RS08710 PF01863 Protein of unknown function DUF45 VC395_RS08715 PF00462 Glutaredoxin VC395_RS08720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS08720 PF03466 LysR substrate binding domain VC395_RS08725 PF07690 Major Facilitator Superfamily VC395_RS08730 PF07209 VC395_RS08730 VC395_RS08735 PF00028 Cadherin domain VC395_RS08735 PF00353 Hemolysin-type calcium-binding repeat (2 copies) VC395_RS08735 PF03160 Calx-beta domain VC395_RS08740 PF02321 Outer membrane efflux protein VC395_RS08745 PF00691 OmpA family VC395_RS08750 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VC395_RS08755 PF03435 Saccharopine dehydrogenase VC395_RS08755 PF16653 VC395_RS08755 VC395_RS08760 PF00202 Aminotransferase class-III VC395_RS08760 PF00282 Pyridoxal-dependent decarboxylase conserved domain VC395_RS08765 PF06965 Na+/H+ antiporter 1 VC395_RS08770 PF07143 Hydroxyneurosporene synthase (CrtC) VC395_RS08770 PF17186 VC395_RS08770 VC395_RS08775 PF02687 VC395_RS08775 VC395_RS08780 PF00005 ABC transporter VC395_RS08785 PF01554 MatE VC395_RS08790 PF11066 VC395_RS08790 VC395_RS08790 PF13460 NADH(P)-binding VC395_RS08795 PF11140 VC395_RS08795 VC395_RS08800 PF07690 Major Facilitator Superfamily VC395_RS08805 PF00849 RNA pseudouridylate synthase VC395_RS08805 PF01479 S4 domain VC395_RS08810 PF00271 Helicase conserved C-terminal domain VC395_RS08810 PF04851 Type III restriction enzyme, res subunit VC395_RS08820 PF00072 Response regulator receiver domain VC395_RS08820 PF00486 Transcriptional regulatory protein, C terminal VC395_RS08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS08830 PF01386 Ribosomal L25p family VC395_RS08835 PF00563 EAL domain VC395_RS08840 PF12614 VC395_RS08840 VC395_RS08850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS08850 PF00672 HAMP domain VC395_RS08850 PF12729 VC395_RS08850 VC395_RS08855 PF11301 VC395_RS08855 VC395_RS08860 PF13419 Haloacid dehalogenase-like hydrolase VC395_RS08870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC395_RS08870 PF12793 VC395_RS08870 VC395_RS08875 PF00089 Trypsin VC395_RS08885 PF00072 Response regulator receiver domain VC395_RS08890 PF00072 Response regulator receiver domain VC395_RS08890 PF00196 Bacterial regulatory proteins, luxR family VC395_RS08890 PF00563 EAL domain VC395_RS08895 PF00072 Response regulator receiver domain VC395_RS08895 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS08895 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS08895 PF01627 Hpt domain VC395_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS08900 PF00571 CBS domain VC395_RS08900 PF01769 Divalent cation transporter VC395_RS08905 PF00892 EamA-like transporter family VC395_RS08910 PF03222 Tryptophan/tyrosine permease family VC395_RS08915 PF13437 HlyD family secretion protein VC395_RS08920 PF00005 ABC transporter VC395_RS08925 PF12698 ABC-2 family transporter protein VC395_RS08935 PF06945 VC395_RS08935 VC395_RS08940 PF03724 META domain VC395_RS08945 PF13416 Bacterial extracellular solute-binding protein VC395_RS08950 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS08955 PF00005 ABC transporter VC395_RS08960 PF01066 CDP-alcohol phosphatidyltransferase VC395_RS08965 PF00849 RNA pseudouridylate synthase VC395_RS08970 PF00209 Sodium:neurotransmitter symporter family VC395_RS08975 PF13091 PLD-like domain VC395_RS08975 PF13396 VC395_RS08975 VC395_RS08980 PF01053 Cys/Met metabolism PLP-dependent enzyme VC395_RS08985 PF03352 Methyladenine glycosylase VC395_RS08990 PF00873 AcrB/AcrD/AcrF family VC395_RS08995 PF13437 HlyD family secretion protein VC395_RS08995 PF13533 Biotin-lipoyl like VC395_RS09000 PF16576 VC395_RS09000 VC395_RS09005 PF04024 VC395_RS09005 VC395_RS09010 PF06667 VC395_RS09010 VC395_RS09015 PF04012 VC395_RS09015 VC395_RS09020 PF00158 Sigma-54 interaction domain VC395_RS09020 PF02954 Bacterial regulatory protein, Fis family VC395_RS09025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC395_RS09030 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS09035 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS09035 PF12911 VC395_RS09035 VC395_RS09040 PF00005 ABC transporter VC395_RS09040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VC395_RS09045 PF00005 ABC transporter VC395_RS09050 PF11150 VC395_RS09050 VC395_RS09055 PF11042 VC395_RS09055 VC395_RS09060 PF01368 DHH family VC395_RS09060 PF02833 DHHA2 domain VC395_RS09065 PF11449 VC395_RS09065 VC395_RS09070 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS09075 PF02065 Melibiase VC395_RS09080 PF00384 Molybdopterin oxidoreductase VC395_RS09080 PF01568 Molydopterin dinucleotide binding domain VC395_RS09085 PF03264 NapC/NirT cytochrome c family, N-terminal region VC395_RS09090 PF06796 VC395_RS09090 VC395_RS09100 PF01226 Formate/nitrite transporter VC395_RS09105 PF06146 VC395_RS09105 VC395_RS09110 PF13460 NADH(P)-binding VC395_RS09115 PF02698 DUF218 domain VC395_RS09125 PF04279 VC395_RS09125 VC395_RS09130 PF03061 Thioesterase superfamily VC395_RS09135 PF03795 YCII-related domain VC395_RS09140 PF16549 VC395_RS09140 VC395_RS09145 PF01717 Cobalamin-independent synthase, Catalytic domain VC395_RS09145 PF08267 Cobalamin-independent synthase, N-terminal domain VC395_RS09150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS09150 PF03466 LysR substrate binding domain VC395_RS09155 PF14056 VC395_RS09155 VC395_RS09165 PF00675 Insulinase (Peptidase family M16) VC395_RS09165 PF05193 Peptidase M16 inactive domain VC395_RS09170 PF00563 EAL domain VC395_RS09170 PF13426 PAS domain VC395_RS09175 PF04055 Radical SAM superfamily VC395_RS09175 PF08497 VC395_RS09175 VC395_RS09175 PF11842 VC395_RS09175 VC395_RS09180 PF01810 VC395_RS09180 VC395_RS09190 PF04310 MukB N-terminal VC395_RS09190 PF13558 Putative exonuclease SbcCD, C subunit VC395_RS09190 PF16330 VC395_RS09190 VC395_RS09195 PF04288 MukE-like family VC395_RS09200 PF03882 KicB killing factor VC395_RS09200 PF17192 VC395_RS09200 VC395_RS09200 PF17193 VC395_RS09200 VC395_RS09205 PF08241 Methyltransferase domain VC395_RS09210 PF02698 DUF218 domain VC395_RS09215 PF00072 Response regulator receiver domain VC395_RS09215 PF00486 Transcriptional regulatory protein, C terminal VC395_RS09220 PF02613 Nitrate reductase delta subunit VC395_RS09225 PF00356 Bacterial regulatory proteins, lacI family VC395_RS09225 PF13377 Periplasmic binding protein-like domain VC395_RS09230 PF04993 TfoX N-terminal domain VC395_RS09230 PF04994 TfoX C-terminal domain VC395_RS09235 PF09335 VC395_RS09235 VC395_RS09240 PF09413 Domain of unknown function (DUF2007) VC395_RS09245 PF00561 alpha/beta hydrolase fold VC395_RS09250 PF00534 Glycosyl transferases group 1 VC395_RS09250 PF08323 Starch synthase catalytic domain VC395_RS09255 PF00483 Nucleotidyl transferase VC395_RS09260 PF01131 DNA topoisomerase VC395_RS09260 PF01396 VC395_RS09260 VC395_RS09260 PF01751 Toprim domain VC395_RS09260 PF08272 Topoisomerase I zinc-ribbon-like VC395_RS09265 PF10692 Protein of unknown function (DUF2498) VC395_RS09270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VC395_RS09280 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VC395_RS09285 PF04376 VC395_RS09285 VC395_RS09285 PF04377 VC395_RS09285 VC395_RS09290 PF01176 Translation initiation factor 1A / IF-1 VC395_RS09295 PF07055 Enoyl reductase FAD binding domain VC395_RS09295 PF12241 Trans-2-enoyl-CoA reductase catalytic region VC395_RS09295 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VC395_RS09300 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VC395_RS09300 PF02770 Acyl-CoA dehydrogenase, middle domain VC395_RS09300 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VC395_RS09300 PF09317 VC395_RS09300 VC395_RS09305 PF00440 Bacterial regulatory proteins, tetR family VC395_RS09315 PF07383 VC395_RS09315 VC395_RS09320 PF00171 Aldehyde dehydrogenase family VC395_RS09325 PF00440 Bacterial regulatory proteins, tetR family VC395_RS09325 PF14246 AefR-like transcriptional repressor, C-terminal region VC395_RS09340 PF01103 Surface antigen VC395_RS09345 PF13265 VC395_RS09345 VC395_RS09350 PF00924 Mechanosensitive ion channel VC395_RS09355 PF04403 VC395_RS09355 VC395_RS09360 PF02470 VC395_RS09360 VC395_RS09365 PF03886 Protein of unknown function (DUF330) VC395_RS09370 PF16576 VC395_RS09370 VC395_RS09375 PF00873 AcrB/AcrD/AcrF family VC395_RS09385 PF00589 Phage integrase family VC395_RS09385 PF13356 Domain of unknown function (DUF4102) VC395_RS09395 PF00176 SNF2 family N-terminal domain VC395_RS09395 PF00271 Helicase conserved C-terminal domain VC395_RS09395 PF04471 Restriction endonuclease VC395_RS09400 PF15611 VC395_RS09400 VC395_RS09405 PF00691 OmpA family VC395_RS09415 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VC395_RS09415 PF04851 Type III restriction enzyme, res subunit VC395_RS09420 PF03235 VC395_RS09420 VC395_RS09420 PF07510 VC395_RS09420 VC395_RS09425 PF03235 VC395_RS09425 VC395_RS09430 PF01420 Type I restriction modification DNA specificity domain VC395_RS09435 PF02384 N-6 DNA Methylase VC395_RS09435 PF12161 HsdM N-terminal domain VC395_RS09450 PF13280 VC395_RS09450 VC395_RS09455 PF07646 Kelch motif VC395_RS09460 PF01344 Kelch motif VC395_RS09465 PF01380 SIS domain VC395_RS09465 PF01418 Helix-turn-helix domain, rpiR family VC395_RS09470 PF00701 Dihydrodipicolinate synthetase family VC395_RS09475 PF06808 VC395_RS09475 VC395_RS09480 PF04290 VC395_RS09480 VC395_RS09485 PF03480 Bacterial extracellular solute-binding protein, family 7 VC395_RS09495 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase VC395_RS09500 PF00480 ROK family VC395_RS09505 PF01979 Amidohydrolase family VC395_RS09510 PF09264 Vibrio cholerae sialidase, lectin insertion VC395_RS09510 PF13088 BNR repeat-like domain VC395_RS09515 PF05930 Prophage CP4-57 regulatory protein (AlpA) VC395_RS09520 PF04002 RadC-like JAB domain VC395_RS09530 PF00665 Integrase core domain VC395_RS09530 PF13276 VC395_RS09530 VC395_RS09535 PF01527 Transposase VC395_RS09545 PF10109 VC395_RS09545 VC395_RS09560 PF08765 Mor transcription activator family VC395_RS09565 PF08765 Mor transcription activator family VC395_RS09580 PF13401 AAA domain VC395_RS09585 PF00665 Integrase core domain VC395_RS09620 PF10980 Protein of unknown function (DUF2787) VC395_RS09625 PF01926 50S ribosome-binding GTPase VC395_RS09635 PF05930 Prophage CP4-57 regulatory protein (AlpA) VC395_RS09640 PF11661 VC395_RS09640 VC395_RS09645 PF01936 NYN domain VC395_RS09650 PF04134 VC395_RS09650 VC395_RS09655 PF00875 DNA photolyase VC395_RS09655 PF03441 FAD binding domain of DNA photolyase VC395_RS09660 PF00106 short chain dehydrogenase VC395_RS09665 PF09905 Uncharacterized conserved protein (DUF2132) VC395_RS09670 PF00158 Sigma-54 interaction domain VC395_RS09670 PF01590 GAF domain VC395_RS09670 PF02954 Bacterial regulatory protein, Fis family VC395_RS09675 PF00171 Aldehyde dehydrogenase family VC395_RS09680 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC395_RS09685 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC395_RS09690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC395_RS09690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC395_RS09690 PF02378 Phosphotransferase system, EIIC VC395_RS09695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC395_RS09700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC395_RS09705 PF12833 Helix-turn-helix domain VC395_RS09710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC395_RS09710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VC395_RS09710 PF02378 Phosphotransferase system, EIIC VC395_RS09715 PF01238 Phosphomannose isomerase type I VC395_RS09720 PF06610 VC395_RS09720 VC395_RS09725 PF00072 Response regulator receiver domain VC395_RS09725 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS09725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS09725 PF02743 Cache domain VC395_RS09730 PF03695 Uncharacterised protein family (UPF0149) VC395_RS09735 PF02445 Quinolinate synthetase A protein VC395_RS09740 PF13174 Tetratricopeptide repeat VC395_RS09740 PF13432 Tetratricopeptide repeat VC395_RS09740 PF16331 VC395_RS09740 VC395_RS09745 PF00691 OmpA family VC395_RS09750 PF04052 TolB amino-terminal domain VC395_RS09750 PF07676 WD40-like Beta Propeller Repeat VC395_RS09755 PF06519 TolA C-terminal VC395_RS09760 PF02472 Biopolymer transport protein ExbD/TolR VC395_RS09765 PF01618 VC395_RS09765 VC395_RS09775 PF09600 VC395_RS09775 VC395_RS09780 PF08173 VC395_RS09780 VC395_RS09785 PF02322 VC395_RS09785 VC395_RS09790 PF01654 VC395_RS09790 VC395_RS09795 PF05491 Holliday junction DNA helicase ruvB C-terminus VC395_RS09795 PF05496 Holliday junction DNA helicase ruvB N-terminus VC395_RS09800 PF01330 RuvA N terminal domain VC395_RS09800 PF07499 RuvA, C-terminal domain VC395_RS09800 PF14520 Helix-hairpin-helix domain VC395_RS09805 PF02075 Crossover junction endodeoxyribonuclease RuvC VC395_RS09810 PF01406 tRNA synthetases class I (C) catalytic domain VC395_RS09810 PF09190 DALR domain VC395_RS09815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VC395_RS09820 PF00149 Calcineurin-like phosphoesterase VC395_RS09825 PF00563 EAL domain VC395_RS09825 PF08668 HDOD domain VC395_RS09830 PF02810 SEC-C motif VC395_RS09835 PF09829 VC395_RS09835 VC395_RS09840 PF13609 Gram-negative porin VC395_RS09845 PF06733 DEAD_2 VC395_RS09845 PF13307 Helicase C-terminal domain VC395_RS09850 PF01925 VC395_RS09850 VC395_RS09855 PF07445 Primosomal replication protein priB and priC VC395_RS09860 PF10689 VC395_RS09860 VC395_RS09865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS09865 PF00672 HAMP domain VC395_RS09870 PF03372 Endonuclease/Exonuclease/phosphatase family VC395_RS09875 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS09880 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS09885 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS09890 PF00005 ABC transporter VC395_RS09895 PF11840 VC395_RS09895 VC395_RS09900 PF01228 Glycine radical VC395_RS09900 PF02901 Pyruvate formate lyase VC395_RS09905 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) VC395_RS09910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS09910 PF00672 HAMP domain VC395_RS09915 PF04055 Radical SAM superfamily VC395_RS09915 PF13353 4Fe-4S single cluster domain VC395_RS09920 PF01891 Cobalt uptake substrate-specific transmembrane region VC395_RS09925 PF03887 YfbU domain VC395_RS09930 PF06798 VC395_RS09930 VC395_RS09930 PF08298 PrkA AAA domain VC395_RS09935 PF04285 VC395_RS09935 VC395_RS09940 PF04293 VC395_RS09940 VC395_RS09945 PF02348 Cytidylyltransferase VC395_RS09950 PF03966 Trm112p-like protein VC395_RS09955 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VC395_RS09960 PF00005 ABC transporter VC395_RS09960 PF00664 ABC transporter transmembrane region VC395_RS09965 PF00753 Metallo-beta-lactamase superfamily VC395_RS09965 PF03772 VC395_RS09965 VC395_RS09965 PF13567 VC395_RS09965 VC395_RS09970 PF09835 VC395_RS09970 VC395_RS09975 PF02687 VC395_RS09975 VC395_RS09975 PF12704 MacB-like periplasmic core domain VC395_RS09980 PF00005 ABC transporter VC395_RS09985 PF02687 VC395_RS09985 VC395_RS09985 PF12704 MacB-like periplasmic core domain VC395_RS09995 PF00270 DEAD/DEAH box helicase VC395_RS09995 PF00271 Helicase conserved C-terminal domain VC395_RS09995 PF02559 CarD-like/TRCF domain VC395_RS09995 PF03461 TRCF domain VC395_RS10000 PF10972 VC395_RS10000 VC395_RS10005 PF16458 VC395_RS10005 VC395_RS10010 PF13302 Acetyltransferase (GNAT) domain VC395_RS10015 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC395_RS10020 PF05728 Uncharacterised protein family (UPF0227) VC395_RS10025 PF01636 Phosphotransferase enzyme family VC395_RS10030 PF13036 Protein of unknown function (DUF3897) VC395_RS10035 PF07233 Protein of unknown function (DUF1425) VC395_RS10045 PF01230 HIT domain VC395_RS10050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS10050 PF00672 HAMP domain VC395_RS10055 PF09002 Domain of unknown function (DUF1887) VC395_RS10060 PF00392 Bacterial regulatory proteins, gntR family VC395_RS10060 PF07840 FadR C-terminal domain VC395_RS10065 PF06450 VC395_RS10065 VC395_RS10070 PF02600 Disulfide bond formation protein DsbB VC395_RS10075 PF01580 FtsK/SpoIIIE family VC395_RS10075 PF09397 Ftsk gamma domain VC395_RS10075 PF13491 VC395_RS10075 VC395_RS10080 PF01037 AsnC family VC395_RS10080 PF13412 Winged helix-turn-helix DNA-binding VC395_RS10085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VC395_RS10085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VC395_RS10090 PF13679 VC395_RS10090 VC395_RS10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS10095 PF03466 LysR substrate binding domain VC395_RS10105 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VC395_RS10110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VC395_RS10115 PF13176 Tetratricopeptide repeat VC395_RS10120 PF06305 VC395_RS10120 VC395_RS10125 PF00216 Bacterial DNA-binding protein VC395_RS10130 PF00575 S1 RNA binding domain VC395_RS10135 PF02224 Cytidylate kinase VC395_RS10140 PF12836 Helix-hairpin-helix motif VC395_RS10145 PF13616 PPIC-type PPIASE domain VC395_RS10145 PF13624 SurA N-terminal domain VC395_RS10150 PF00216 Bacterial DNA-binding protein VC395_RS10155 PF00004 ATPase family associated with various cellular activities (AAA) VC395_RS10155 PF02190 ATP-dependent protease La (LON) domain VC395_RS10155 PF05362 Lon protease (S16) C-terminal proteolytic domain VC395_RS10160 PF06689 ClpX C4-type zinc finger VC395_RS10160 PF07724 AAA domain (Cdc48 subfamily) VC395_RS10160 PF10431 C-terminal, D2-small domain, of ClpB protein VC395_RS10165 PF00574 Clp protease VC395_RS10170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC395_RS10170 PF05697 Bacterial trigger factor protein (TF) VC395_RS10170 PF05698 Bacterial trigger factor protein (TF) C-terminus VC395_RS10180 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS10180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS10185 PF00072 Response regulator receiver domain VC395_RS10185 PF00158 Sigma-54 interaction domain VC395_RS10185 PF02954 Bacterial regulatory protein, Fis family VC395_RS10190 PF06808 VC395_RS10190 VC395_RS10195 PF04290 VC395_RS10195 VC395_RS10200 PF03480 Bacterial extracellular solute-binding protein, family 7 VC395_RS10205 PF02696 VC395_RS10205 VC395_RS10220 PF00563 EAL domain VC395_RS10220 PF00990 GGDEF domain VC395_RS10225 PF01066 CDP-alcohol phosphatidyltransferase VC395_RS10230 PF01148 Cytidylyltransferase family VC395_RS10235 PF01553 Acyltransferase VC395_RS10240 PF13279 Thioesterase-like superfamily VC395_RS10245 PF01810 VC395_RS10245 VC395_RS10250 PF12710 haloacid dehalogenase-like hydrolase VC395_RS10255 PF10129 VC395_RS10255 VC395_RS10265 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VC395_RS10265 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VC395_RS10270 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VC395_RS10275 PF01494 FAD binding domain VC395_RS10280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS10280 PF03466 LysR substrate binding domain VC395_RS10285 PF02668 Taurine catabolism dioxygenase TauD, TfdA family VC395_RS10285 PF05141 Pyoverdine/dityrosine biosynthesis protein VC395_RS10290 PF00384 Molybdopterin oxidoreductase VC395_RS10290 PF01568 Molydopterin dinucleotide binding domain VC395_RS10295 PF03264 NapC/NirT cytochrome c family, N-terminal region VC395_RS10300 PF00704 Glycosyl hydrolases family 18 VC395_RS10300 PF02839 Carbohydrate binding domain VC395_RS10305 PF01773 Na+ dependent nucleoside transporter N-terminus VC395_RS10305 PF07662 Na+ dependent nucleoside transporter C-terminus VC395_RS10305 PF07670 Nucleoside recognition VC395_RS10310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS10310 PF03466 LysR substrate binding domain VC395_RS10315 PF13406 Transglycosylase SLT domain VC395_RS10320 PF05166 YcgL domain VC395_RS10325 PF03775 Septum formation inhibitor MinC, C-terminal domain VC395_RS10325 PF05209 Septum formation inhibitor MinC, N-terminal domain VC395_RS10330 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VC395_RS10335 PF03776 Septum formation topological specificity factor MinE VC395_RS10340 PF04170 NlpE N-terminal domain VC395_RS10345 PF06844 Protein of unknown function (DUF1244) VC395_RS10350 PF04280 Tim44-like domain VC395_RS10350 PF07466 VC395_RS10350 VC395_RS10355 PF13305 WHG domain VC395_RS10360 PF01553 Acyltransferase VC395_RS10360 PF07690 Major Facilitator Superfamily VC395_RS10370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS10370 PF00672 HAMP domain VC395_RS10375 PF01381 Helix-turn-helix VC395_RS10380 PF03594 VC395_RS10380 VC395_RS10385 PF00501 AMP-binding enzyme VC395_RS10390 PF13378 Enolase C-terminal domain-like VC395_RS10395 PF00378 Enoyl-CoA hydratase/isomerase family VC395_RS10400 PF12697 Alpha/beta hydrolase family VC395_RS10405 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VC395_RS10405 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VC395_RS10405 PF16582 VC395_RS10405 VC395_RS10410 PF00425 chorismate binding enzyme VC395_RS10415 PF00155 Aminotransferase class I and II VC395_RS10420 PF13023 HD domain VC395_RS10425 PF01966 HD domain VC395_RS10425 PF13286 Phosphohydrolase-associated domain VC395_RS10430 PF03942 VC395_RS10430 VC395_RS10435 PF01694 Rhomboid family VC395_RS10440 PF01432 Peptidase family M3 VC395_RS10445 PF00570 HRDC domain VC395_RS10445 PF01612 3'-5' exonuclease VC395_RS10450 PF00501 AMP-binding enzyme VC395_RS10450 PF13193 AMP-binding enzyme C-terminal domain VC395_RS10455 PF12697 Alpha/beta hydrolase family VC395_RS10460 PF03843 VC395_RS10460 VC395_RS10470 PF00814 Glycoprotease family VC395_RS10475 PF00270 DEAD/DEAH box helicase VC395_RS10475 PF06733 DEAD_2 VC395_RS10475 PF13307 Helicase C-terminal domain VC395_RS10485 PF00551 Formyl transferase VC395_RS10485 PF01842 ACT domain VC395_RS10490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VC395_RS10490 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC395_RS10495 PF01343 Peptidase family S49 VC395_RS10500 PF00710 Asparaginase VC395_RS10505 PF07023 VC395_RS10505 VC395_RS10510 PF11207 VC395_RS10510 VC395_RS10515 PF01641 SelR domain VC395_RS10520 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC395_RS10520 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VC395_RS10525 PF01263 Aldose 1-epimerase VC395_RS10530 PF11059 VC395_RS10530 VC395_RS10535 PF13649 Methyltransferase domain VC395_RS10540 PF04187 Protein of unknown function, DUF399 VC395_RS10550 PF00072 Response regulator receiver domain VC395_RS10550 PF01584 CheW-like domain VC395_RS10555 PF00480 ROK family VC395_RS10560 PF00224 Pyruvate kinase, barrel domain VC395_RS10560 PF02887 Pyruvate kinase, alpha/beta domain VC395_RS10565 PF01734 Patatin-like phospholipase VC395_RS10580 PF00209 Sodium:neurotransmitter symporter family VC395_RS10585 PF00367 phosphotransferase system, EIIB VC395_RS10585 PF02378 Phosphotransferase system, EIIC VC395_RS10590 PF01026 TatD related DNase VC395_RS10595 PF09115 DNA polymerase III, delta subunit, C terminal VC395_RS10595 PF13177 DNA polymerase III, delta subunit VC395_RS10600 PF02223 Thymidylate kinase VC395_RS10605 PF02618 YceG-like family VC395_RS10610 PF01063 Aminotransferase class IV VC395_RS10615 PF00109 Beta-ketoacyl synthase, N-terminal domain VC395_RS10615 PF02801 Beta-ketoacyl synthase, C-terminal domain VC395_RS10620 PF00550 Phosphopantetheine attachment site VC395_RS10625 PF13561 Enoyl-(Acyl carrier protein) reductase VC395_RS10630 PF00698 Acyl transferase domain VC395_RS10635 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VC395_RS10635 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VC395_RS10640 PF02504 Fatty acid synthesis protein VC395_RS10645 PF01783 Ribosomal L32p protein family VC395_RS10650 PF02620 VC395_RS10650 VC395_RS10655 PF02545 Maf-like protein VC395_RS10660 PF00849 RNA pseudouridylate synthase VC395_RS10660 PF01479 S4 domain VC395_RS10675 PF00575 S1 RNA binding domain VC395_RS10675 PF10150 Ribonuclease E/G family VC395_RS10680 PF00916 VC395_RS10680 VC395_RS10680 PF01740 STAS domain VC395_RS10690 PF00171 Aldehyde dehydrogenase family VC395_RS10690 PF00465 Iron-containing alcohol dehydrogenase VC395_RS10695 PF01914 VC395_RS10695 VC395_RS10700 PF01118 Semialdehyde dehydrogenase, NAD binding domain VC395_RS10700 PF02774 Semialdehyde dehydrogenase, dimerisation domain VC395_RS10705 PF03553 VC395_RS10705 VC395_RS10710 PF01627 Hpt domain VC395_RS10715 PF04245 VC395_RS10715 VC395_RS10720 PF07208 Protein of unknown function (DUF1414) VC395_RS10725 PF00884 Sulfatase VC395_RS10725 PF11893 VC395_RS10725 VC395_RS10740 PF00850 Histone deacetylase domain VC395_RS10745 PF01131 DNA topoisomerase VC395_RS10745 PF01751 Toprim domain VC395_RS10750 PF00462 Glutaredoxin VC395_RS10755 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VC395_RS10755 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VC395_RS10760 PF11993 VC395_RS10760 VC395_RS10765 PF00106 short chain dehydrogenase VC395_RS10770 PF04333 VC395_RS10770 VC395_RS10775 PF14559 Tetratricopeptide repeat VC395_RS10780 PF03918 Cytochrome C biogenesis protein VC395_RS10785 PF08534 Redoxin VC395_RS10790 PF01578 VC395_RS10790 VC395_RS10790 PF16327 VC395_RS10790 VC395_RS10795 PF03100 CcmE VC395_RS10800 PF04995 VC395_RS10800 VC395_RS10805 PF01578 VC395_RS10805 VC395_RS10810 PF03379 VC395_RS10810 VC395_RS10815 PF00005 ABC transporter VC395_RS10820 PF10975 VC395_RS10820 VC395_RS10825 PF01584 CheW-like domain VC395_RS10830 PF01584 CheW-like domain VC395_RS10835 PF13614 AAA domain VC395_RS10840 PF00072 Response regulator receiver domain VC395_RS10840 PF01339 CheB methylesterase VC395_RS10845 PF01584 CheW-like domain VC395_RS10845 PF01627 Hpt domain VC395_RS10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS10845 PF02895 Signal transducing histidine kinase, homodimeric domain VC395_RS10850 PF04344 Chemotaxis phosphatase, CheZ VC395_RS10855 PF00072 Response regulator receiver domain VC395_RS10860 PF04539 Sigma-70 region 3 VC395_RS10860 PF04542 Sigma-70 region 2 VC395_RS10860 PF04545 Sigma-70, region 4 VC395_RS10865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VC395_RS10870 PF00448 SRP54-type protein, GTPase domain VC395_RS10875 PF00771 FHIPEP family VC395_RS10880 PF00300 Histidine phosphatase superfamily (branch 1) VC395_RS10885 PF00675 Insulinase (Peptidase family M16) VC395_RS10885 PF05193 Peptidase M16 inactive domain VC395_RS10885 PF16187 VC395_RS10885 VC395_RS10890 PF06185 YecM protein VC395_RS10895 PF00750 tRNA synthetases class I (R) VC395_RS10895 PF03485 Arginyl tRNA synthetase N terminal domain VC395_RS10895 PF05746 DALR anticodon binding domain VC395_RS10900 PF01230 HIT domain VC395_RS10905 PF09012 FeoC like transcriptional regulator VC395_RS10910 PF02421 Ferrous iron transport protein B VC395_RS10910 PF07664 VC395_RS10910 VC395_RS10910 PF07670 Nucleoside recognition VC395_RS10915 PF04023 FeoA domain VC395_RS10920 PF12833 Helix-turn-helix domain VC395_RS10925 PF01297 Periplasmic solute binding protein family VC395_RS10930 PF00005 ABC transporter VC395_RS10935 PF00950 VC395_RS10935 VC395_RS10940 PF00549 CoA-ligase VC395_RS10940 PF02629 CoA binding domain VC395_RS10945 PF00549 CoA-ligase VC395_RS10945 PF08442 ATP-grasp domain VC395_RS10950 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VC395_RS10950 PF00364 Biotin-requiring enzyme VC395_RS10950 PF02817 e3 binding domain VC395_RS10955 PF00676 Dehydrogenase E1 component VC395_RS10955 PF02779 Transketolase, pyrimidine binding domain VC395_RS10955 PF16078 VC395_RS10955 VC395_RS10955 PF16870 VC395_RS10955 VC395_RS10960 PF13085 2Fe-2S iron-sulfur cluster binding domain VC395_RS10960 PF13534 4Fe-4S dicluster domain VC395_RS10965 PF00890 FAD binding domain VC395_RS10965 PF02910 Fumarate reductase flavoprotein C-term VC395_RS10970 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VC395_RS10975 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VC395_RS10980 PF00285 Citrate synthase VC395_RS10985 PF01784 NIF3 (NGG1p interacting factor 3) VC395_RS10990 PF08907 VC395_RS10990 VC395_RS10995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VC395_RS10995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VC395_RS10995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VC395_RS10995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VC395_RS11000 PF03925 SeqA protein VC395_RS11005 PF12697 Alpha/beta hydrolase family VC395_RS11010 PF10981 VC395_RS11010 VC395_RS11015 PF00258 Flavodoxin VC395_RS11020 PF04172 VC395_RS11020 VC395_RS11025 PF03788 VC395_RS11025 VC395_RS11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS11030 PF03466 LysR substrate binding domain VC395_RS11035 PF14539 Domain of unknown function (DUF4442) VC395_RS11040 PF01475 Ferric uptake regulator family VC395_RS11045 PF01118 Semialdehyde dehydrogenase, NAD binding domain VC395_RS11045 PF02774 Semialdehyde dehydrogenase, dimerisation domain VC395_RS11050 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VC395_RS11050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC395_RS11050 PF11890 Domain of unknown function (DUF3410) VC395_RS11055 PF00109 Beta-ketoacyl synthase, N-terminal domain VC395_RS11055 PF02801 Beta-ketoacyl synthase, C-terminal domain VC395_RS11060 PF01266 FAD dependent oxidoreductase VC395_RS11060 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VC395_RS11065 PF03358 NADPH-dependent FMN reductase VC395_RS11070 PF08891 VC395_RS11070 VC395_RS11075 PF04315 VC395_RS11075 VC395_RS11080 PF03458 VC395_RS11080 VC395_RS11085 PF01264 Chorismate synthase VC395_RS11095 PF05175 Methyltransferase small domain VC395_RS11100 PF01713 Smr domain VC395_RS11105 PF01312 FlhB HrpN YscU SpaS Family VC395_RS11110 PF01311 VC395_RS11110 VC395_RS11115 PF01313 VC395_RS11115 VC395_RS11120 PF00813 VC395_RS11120 VC395_RS11125 PF04347 VC395_RS11125 VC395_RS11130 PF01052 Surface presentation of antigens (SPOA) VC395_RS11135 PF01052 Surface presentation of antigens (SPOA) VC395_RS11135 PF02154 Flagellar motor switch protein FliM VC395_RS11140 PF03748 VC395_RS11140 VC395_RS11145 PF02120 Flagellar hook-length control protein FliK VC395_RS11150 PF02050 Flagellar FliJ protein VC395_RS11155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VC395_RS11160 PF02108 VC395_RS11160 VC395_RS11165 PF01706 FliG C-terminal domain VC395_RS11165 PF14841 FliG middle domain VC395_RS11165 PF14842 FliG N-terminal domain VC395_RS11170 PF01514 Secretory protein of YscJ/FliF family VC395_RS11170 PF08345 VC395_RS11170 VC395_RS11175 PF02049 VC395_RS11175 VC395_RS11180 PF00072 Response regulator receiver domain VC395_RS11180 PF00158 Sigma-54 interaction domain VC395_RS11180 PF02954 Bacterial regulatory protein, Fis family VC395_RS11185 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS11185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS11185 PF13188 PAS domain VC395_RS11190 PF00158 Sigma-54 interaction domain VC395_RS11190 PF02954 Bacterial regulatory protein, Fis family VC395_RS11190 PF06490 VC395_RS11190 VC395_RS11195 PF02561 Flagellar protein FliS VC395_RS11205 PF02465 VC395_RS11205 VC395_RS11205 PF07195 VC395_RS11205 VC395_RS11205 PF07196 Flagellin hook IN motif VC395_RS11210 PF03646 FlaG protein VC395_RS11215 PF00669 Bacterial flagellin N-terminal helical region VC395_RS11215 PF00700 Bacterial flagellin C-terminal helical region VC395_RS11215 PF07196 Flagellin hook IN motif VC395_RS11220 PF00669 Bacterial flagellin N-terminal helical region VC395_RS11220 PF00700 Bacterial flagellin C-terminal helical region VC395_RS11220 PF07196 Flagellin hook IN motif VC395_RS11225 PF00669 Bacterial flagellin N-terminal helical region VC395_RS11225 PF00700 Bacterial flagellin C-terminal helical region VC395_RS11225 PF07196 Flagellin hook IN motif VC395_RS11230 PF04261 Dyp-type peroxidase family VC395_RS11235 PF11143 VC395_RS11235 VC395_RS11240 PF11169 VC395_RS11240 VC395_RS11245 PF09904 Winged helix-turn helix VC395_RS11250 PF03960 ArsC family VC395_RS11255 PF01546 Peptidase family M20/M25/M40 VC395_RS11255 PF07687 Peptidase dimerisation domain VC395_RS11260 PF02557 D-alanyl-D-alanine carboxypeptidase VC395_RS11265 PF11446 VC395_RS11265 VC395_RS11270 PF06804 NlpB/DapX lipoprotein VC395_RS11275 PF00701 Dihydrodipicolinate synthetase family VC395_RS11280 PF13740 ACT domain VC395_RS11285 PF00578 AhpC/TSA family VC395_RS11290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS11290 PF00672 HAMP domain VC395_RS11290 PF02743 Cache domain VC395_RS11295 PF01594 VC395_RS11295 VC395_RS11300 PF01206 Sulfurtransferase TusA VC395_RS11305 PF01435 Peptidase family M48 VC395_RS11305 PF13181 Tetratricopeptide repeat VC395_RS11305 PF14559 Tetratricopeptide repeat VC395_RS11310 PF03960 ArsC family VC395_RS11315 PF03358 NADPH-dependent FMN reductase VC395_RS11320 PF09842 VC395_RS11320 VC395_RS11325 PF09839 VC395_RS11325 VC395_RS11330 PF00860 Permease family VC395_RS11335 PF04073 Aminoacyl-tRNA editing domain VC395_RS11340 PF00149 Calcineurin-like phosphoesterase VC395_RS11340 PF02872 5'-nucleotidase, C-terminal domain VC395_RS11345 PF00793 DAHP synthetase I family VC395_RS11350 PF13369 VC395_RS11350 VC395_RS11350 PF13371 Tetratricopeptide repeat VC395_RS11355 PF04247 VC395_RS11355 VC395_RS11360 PF13847 Methyltransferase domain VC395_RS11365 PF00472 RF-1 domain VC395_RS11365 PF03462 PCRF domain VC395_RS11370 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VC395_RS11370 PF01488 Shikimate / quinate 5-dehydrogenase VC395_RS11370 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VC395_RS11375 PF03550 Outer membrane lipoprotein LolB VC395_RS11380 PF00288 GHMP kinases N terminal domain VC395_RS11380 PF08544 GHMP kinases C terminal VC395_RS11385 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VC395_RS11385 PF14572 Phosphoribosyl synthetase-associated domain VC395_RS11390 PF01195 Peptidyl-tRNA hydrolase VC395_RS11395 PF01926 50S ribosome-binding GTPase VC395_RS11395 PF06071 Protein of unknown function (DUF933) VC395_RS11470 PF01797 Transposase IS200 like VC395_RS11475 PF00669 Bacterial flagellin N-terminal helical region VC395_RS11475 PF00700 Bacterial flagellin C-terminal helical region VC395_RS11475 PF07196 Flagellin hook IN motif VC395_RS11480 PF00669 Bacterial flagellin N-terminal helical region VC395_RS11480 PF00700 Bacterial flagellin C-terminal helical region VC395_RS11480 PF07196 Flagellin hook IN motif VC395_RS11490 PF00669 Bacterial flagellin N-terminal helical region VC395_RS11490 PF00700 Bacterial flagellin C-terminal helical region VC395_RS11495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC395_RS11500 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VC395_RS11500 PF10135 VC395_RS11500 VC395_RS11505 PF02119 VC395_RS11505 VC395_RS11510 PF02107 VC395_RS11510 VC395_RS11515 PF00460 Flagella basal body rod protein VC395_RS11515 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC395_RS11520 PF00460 Flagella basal body rod protein VC395_RS11520 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC395_RS11525 PF00460 Flagella basal body rod protein VC395_RS11525 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC395_RS11525 PF07559 Flagellar basal body protein FlaE VC395_RS11530 PF03963 VC395_RS11530 VC395_RS11530 PF13860 FlgD Ig-like domain VC395_RS11530 PF13861 FlgD Tudor-like domain VC395_RS11535 PF00460 Flagella basal body rod protein VC395_RS11535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VC395_RS11545 PF01739 CheR methyltransferase, SAM binding domain VC395_RS11545 PF03705 CheR methyltransferase, all-alpha domain VC395_RS11550 PF00072 Response regulator receiver domain VC395_RS11550 PF01584 CheW-like domain VC395_RS11555 PF13144 SAF-like VC395_RS11560 PF04316 Anti-sigma-28 factor, FlgM VC395_RS11565 PF05130 FlgN protein VC395_RS11570 PF02169 LPP20 lipoprotein VC395_RS11580 PF16538 VC395_RS11580 VC395_RS11580 PF16539 VC395_RS11580 VC395_RS11580 PF16548 VC395_RS11580 VC395_RS11585 PF00501 AMP-binding enzyme VC395_RS11585 PF00550 Phosphopantetheine attachment site VC395_RS11585 PF00668 Condensation domain VC395_RS11585 PF08415 VC395_RS11585 VC395_RS11585 PF13193 AMP-binding enzyme C-terminal domain VC395_RS11590 PF04954 Siderophore-interacting protein VC395_RS11590 PF08021 Siderophore-interacting FAD-binding domain VC395_RS11595 PF00593 TonB dependent receptor VC395_RS11595 PF07715 TonB-dependent Receptor Plug Domain VC395_RS11605 PF00691 OmpA family VC395_RS11605 PF01389 OmpA-like transmembrane domain VC395_RS11610 PF00749 tRNA synthetases class I (E and Q), catalytic domain VC395_RS11615 PF00122 E1-E2 ATPase VC395_RS11615 PF00403 Heavy-metal-associated domain VC395_RS11615 PF00702 haloacid dehalogenase-like hydrolase VC395_RS11620 PF04214 VC395_RS11620 VC395_RS11625 PF00728 Glycosyl hydrolase family 20, catalytic domain VC395_RS11625 PF02838 Glycosyl hydrolase family 20, domain 2 VC395_RS11625 PF03173 Putative carbohydrate binding domain VC395_RS11625 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VC395_RS11630 PF01963 VC395_RS11630 VC395_RS11640 PF11346 VC395_RS11640 VC395_RS11645 PF01713 Smr domain VC395_RS11650 PF00849 RNA pseudouridylate synthase VC395_RS11650 PF01479 S4 domain VC395_RS11655 PF00990 GGDEF domain VC395_RS11655 PF02743 Cache domain VC395_RS11660 PF14681 Uracil phosphoribosyltransferase VC395_RS11665 PF00586 AIR synthase related protein, N-terminal domain VC395_RS11665 PF02769 AIR synthase related protein, C-terminal domain VC395_RS11670 PF00551 Formyl transferase VC395_RS11675 PF13230 Glutamine amidotransferases class-II VC395_RS11680 PF13580 SIS domain VC395_RS11685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VC395_RS11685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VC395_RS11685 PF09317 VC395_RS11685 VC395_RS11695 PF00929 Exonuclease VC395_RS11700 PF00075 RNase H VC395_RS11705 PF08241 Methyltransferase domain VC395_RS11710 PF00753 Metallo-beta-lactamase superfamily VC395_RS11710 PF16123 VC395_RS11710 VC395_RS11715 PF01464 Transglycosylase SLT domain VC395_RS11715 PF01476 LysM domain VC395_RS11720 PF03372 Endonuclease/Exonuclease/phosphatase family VC395_RS11725 PF00543 Nitrogen regulatory protein P-II VC395_RS11730 PF05870 Phenolic acid decarboxylase (PAD) VC395_RS11735 PF00034 Cytochrome c VC395_RS11740 PF01171 PP-loop family VC395_RS11740 PF09179 TilS substrate binding domain VC395_RS11740 PF11734 TilS substrate C-terminal domain VC395_RS11745 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VC395_RS11750 PF01336 OB-fold nucleic acid binding domain VC395_RS11750 PF02811 PHP domain VC395_RS11750 PF07733 Bacterial DNA polymerase III alpha subunit VC395_RS11750 PF14579 Helix-hairpin-helix motif VC395_RS11755 PF01351 Ribonuclease HII VC395_RS11760 PF02684 VC395_RS11760 VC395_RS11765 PF00132 Bacterial transferase hexapeptide (six repeats) VC395_RS11765 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VC395_RS11770 PF07977 FabA-like domain VC395_RS11775 PF00132 Bacterial transferase hexapeptide (six repeats) VC395_RS11775 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VC395_RS11775 PF14602 Hexapeptide repeat of succinyl-transferase VC395_RS11780 PF03938 Outer membrane protein (OmpH-like) VC395_RS11785 PF01103 Surface antigen VC395_RS11785 PF07244 Surface antigen variable number repeat VC395_RS11790 PF00595 PDZ domain (Also known as DHR or GLGF) VC395_RS11790 PF02163 Peptidase family M50 VC395_RS11795 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VC395_RS11795 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal VC395_RS11795 PF13288 DXP reductoisomerase C-terminal domain VC395_RS11800 PF01148 Cytidylyltransferase family VC395_RS11805 PF01255 Putative undecaprenyl diphosphate synthase VC395_RS11810 PF01765 Ribosome recycling factor VC395_RS11815 PF00696 Amino acid kinase family VC395_RS11820 PF00889 Elongation factor TS VC395_RS11825 PF00318 Ribosomal protein S2 VC395_RS11830 PF00557 Metallopeptidase family M24 VC395_RS11835 PF01909 Nucleotidyltransferase domain VC395_RS11835 PF01966 HD domain VC395_RS11835 PF08335 GlnD PII-uridylyltransferase VC395_RS11840 PF11944 VC395_RS11840 VC395_RS11845 PF04608 Phosphatidylglycerophosphatase A VC395_RS11850 PF00586 AIR synthase related protein, N-terminal domain VC395_RS11850 PF02769 AIR synthase related protein, C-terminal domain VC395_RS11855 PF01029 NusB family VC395_RS11860 PF00885 6,7-dimethyl-8-ribityllumazine synthase VC395_RS11865 PF00925 GTP cyclohydrolase II VC395_RS11865 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VC395_RS11870 PF00677 Lumazine binding domain VC395_RS11875 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VC395_RS11875 PF01872 RibD C-terminal domain VC395_RS11880 PF03477 ATP cone domain VC395_RS11885 PF00171 Aldehyde dehydrogenase family VC395_RS11890 PF00696 Amino acid kinase family VC395_RS11890 PF01472 PUA domain VC395_RS11895 PF07417 Transcriptional regulator Crl VC395_RS11900 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VC395_RS11905 PF00156 Phosphoribosyl transferase domain VC395_RS11910 PF00860 Permease family VC395_RS11915 PF01546 Peptidase family M20/M25/M40 VC395_RS11915 PF07687 Peptidase dimerisation domain VC395_RS11920 PF05618 Putative ATP-dependant zinc protease VC395_RS11925 PF08443 RimK-like ATP-grasp domain VC395_RS11930 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VC395_RS11935 PF00209 Sodium:neurotransmitter symporter family VC395_RS11940 PF00990 GGDEF domain VC395_RS11940 PF05228 VC395_RS11940 VC395_RS11945 PF11101 VC395_RS11945 VC395_RS11950 PF00817 impB/mucB/samB family VC395_RS11950 PF11798 IMS family HHH motif VC395_RS11955 PF04400 VC395_RS11955 VC395_RS11960 PF02424 ApbE family VC395_RS11965 PF00111 2Fe-2S iron-sulfur cluster binding domain VC395_RS11965 PF00175 Oxidoreductase NAD-binding domain VC395_RS11965 PF00970 Oxidoreductase FAD-binding domain VC395_RS11970 PF02508 VC395_RS11970 VC395_RS11975 PF02508 VC395_RS11975 VC395_RS11980 PF04205 FMN-binding domain VC395_RS11985 PF03116 VC395_RS11985 VC395_RS11990 PF05896 VC395_RS11990 VC395_RS11990 PF11973 VC395_RS11990 VC395_RS11995 PF01722 BolA-like protein VC395_RS12000 PF05175 Methyltransferase small domain VC395_RS12005 PF03923 VC395_RS12005 VC395_RS12010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VC395_RS12015 PF07690 Major Facilitator Superfamily VC395_RS12020 PF12973 ChrR Cupin-like domain VC395_RS12020 PF13490 Putative zinc-finger VC395_RS12025 PF04542 Sigma-70 region 2 VC395_RS12025 PF04545 Sigma-70, region 4 VC395_RS12030 PF02190 ATP-dependent protease La (LON) domain VC395_RS12035 PF03502 Nucleoside-specific channel-forming protein, Tsx VC395_RS12040 PF02558 Ketopantoate reductase PanE/ApbA VC395_RS12040 PF08546 Ketopantoate reductase PanE/ApbA C terminal VC395_RS12045 PF01965 DJ-1/PfpI family VC395_RS12050 PF00266 Aminotransferase class-V VC395_RS12055 PF02657 Fe-S metabolism associated domain VC395_RS12060 PF00899 ThiF family VC395_RS12065 PF03562 MltA specific insert domain VC395_RS12065 PF06725 3D domain VC395_RS12070 PF11012 VC395_RS12070 VC395_RS12075 PF00696 Amino acid kinase family VC395_RS12090 PF13538 UvrD-like helicase C-terminal domain VC395_RS12090 PF13604 AAA domain VC395_RS12095 PF00580 UvrD/REP helicase N-terminal domain VC395_RS12095 PF12705 PD-(D/E)XK nuclease superfamily VC395_RS12095 PF13361 UvrD-like helicase C-terminal domain VC395_RS12100 PF04257 Exodeoxyribonuclease V, gamma subunit VC395_RS12105 PF03595 Voltage-dependent anion channel VC395_RS12110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS12110 PF03466 LysR substrate binding domain VC395_RS12115 PF07130 YebG protein VC395_RS12120 PF14602 Hexapeptide repeat of succinyl-transferase VC395_RS12120 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VC395_RS12120 PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal VC395_RS12125 PF05940 VC395_RS12125 VC395_RS12130 PF11814 VC395_RS12130 VC395_RS12130 PF13673 Acetyltransferase (GNAT) domain VC395_RS12135 PF08443 RimK-like ATP-grasp domain VC395_RS12135 PF14401 VC395_RS12135 VC395_RS12140 PF01544 CorA-like Mg2+ transporter protein VC395_RS12145 PF06094 AIG2-like family VC395_RS12150 PF01588 Putative tRNA binding domain VC395_RS12155 PF00356 Bacterial regulatory proteins, lacI family VC395_RS12155 PF13377 Periplasmic binding protein-like domain VC395_RS12160 PF00703 Glycosyl hydrolases family 2 VC395_RS12160 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VC395_RS12160 PF02837 Glycosyl hydrolases family 2, sugar binding domain VC395_RS12160 PF02929 Beta galactosidase small chain VC395_RS12160 PF16353 VC395_RS12160 VC395_RS12165 PF02417 VC395_RS12165 VC395_RS12170 PF13487 HD domain VC395_RS12175 PF00501 AMP-binding enzyme VC395_RS12180 PF00009 Elongation factor Tu GTP binding domain VC395_RS12180 PF00679 Elongation factor G C-terminus VC395_RS12180 PF03144 Elongation factor Tu domain 2 VC395_RS12180 PF03764 Elongation factor G, domain IV VC395_RS12180 PF14492 Elongation Factor G, domain II VC395_RS12185 PF13481 AAA domain VC395_RS12185 PF13541 Subunit ChlI of Mg-chelatase VC395_RS12190 PF07238 PilZ domain VC395_RS12195 PF00702 haloacid dehalogenase-like hydrolase VC395_RS12200 PF10144 VC395_RS12200 VC395_RS12205 PF01048 Phosphorylase superfamily VC395_RS12210 PF01676 Metalloenzyme superfamily VC395_RS12215 PF00591 Glycosyl transferase family, a/b domain VC395_RS12215 PF02885 Glycosyl transferase family, helical bundle domain VC395_RS12215 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VC395_RS12220 PF01791 DeoC/LacD family aldolase VC395_RS12230 PF01773 Na+ dependent nucleoside transporter N-terminus VC395_RS12230 PF07662 Na+ dependent nucleoside transporter C-terminus VC395_RS12230 PF07670 Nucleoside recognition VC395_RS12235 PF01026 TatD related DNase VC395_RS12240 PF03883 VC395_RS12240 VC395_RS12245 PF01235 VC395_RS12245 VC395_RS12250 PF12065 VC395_RS12250 VC395_RS12255 PF01814 Hemerythrin HHE cation binding domain VC395_RS12260 PF03167 Uracil DNA glycosylase superfamily VC395_RS12265 PF01261 Xylose isomerase-like TIM barrel VC395_RS12270 PF01228 Glycine radical VC395_RS12275 PF00291 Pyridoxal-phosphate dependent enzyme VC395_RS12275 PF14821 Threonine synthase N terminus VC395_RS12280 PF00288 GHMP kinases N terminal domain VC395_RS12280 PF08544 GHMP kinases C terminal VC395_RS12285 PF00696 Amino acid kinase family VC395_RS12285 PF00742 Homoserine dehydrogenase VC395_RS12285 PF01842 ACT domain VC395_RS12285 PF03447 Homoserine dehydrogenase, NAD binding domain VC395_RS12285 PF13840 ACT domain VC395_RS12295 PF03737 Demethylmenaquinone methyltransferase VC395_RS12300 PF11697 VC395_RS12300 VC395_RS12305 PF00072 Response regulator receiver domain VC395_RS12305 PF00486 Transcriptional regulatory protein, C terminal VC395_RS12310 PF00072 Response regulator receiver domain VC395_RS12310 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS12310 PF00989 PAS fold VC395_RS12310 PF01627 Hpt domain VC395_RS12310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS12315 PF00990 GGDEF domain VC395_RS12315 PF08448 PAS fold VC395_RS12315 PF13188 PAS domain VC395_RS12320 PF04055 Radical SAM superfamily VC395_RS12320 PF16199 VC395_RS12320 VC395_RS12325 PF00310 Glutamine amidotransferases class-II VC395_RS12325 PF01493 GXGXG motif VC395_RS12325 PF01645 Conserved region in glutamate synthase VC395_RS12325 PF04898 Glutamate synthase central domain VC395_RS12330 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC395_RS12330 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VC395_RS12335 PF00310 Glutamine amidotransferases class-II VC395_RS12335 PF01493 GXGXG motif VC395_RS12335 PF01645 Conserved region in glutamate synthase VC395_RS12335 PF04898 Glutamate synthase central domain VC395_RS12340 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC395_RS12340 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VC395_RS12345 PF07386 VC395_RS12345 VC395_RS12350 PF01048 Phosphorylase superfamily VC395_RS12355 PF03186 VC395_RS12355 VC395_RS12360 PF01497 Periplasmic binding protein VC395_RS12365 PF03458 VC395_RS12365 VC395_RS12370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS12370 PF03466 LysR substrate binding domain VC395_RS12375 PF01925 VC395_RS12375 VC395_RS12380 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VC395_RS12405 PF02142 MGS-like domain VC395_RS12405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VC395_RS12405 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VC395_RS12410 PF00117 Glutamine amidotransferase class-I VC395_RS12410 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VC395_RS12420 PF01113 Dihydrodipicolinate reductase, N-terminus VC395_RS12420 PF05173 Dihydrodipicolinate reductase, C-terminus VC395_RS12425 PF00293 NUDIX domain VC395_RS12435 PF01043 SecA preprotein cross-linking domain VC395_RS12435 PF02810 SEC-C motif VC395_RS12435 PF07516 SecA Wing and Scaffold domain VC395_RS12435 PF07517 SecA DEAD-like domain VC395_RS12440 PF05258 VC395_RS12440 VC395_RS12445 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VC395_RS12450 PF00091 Tubulin/FtsZ family, GTPase domain VC395_RS12450 PF12327 FtsZ family, C-terminal domain VC395_RS12455 PF02491 SHS2 domain inserted in FTSA VC395_RS12455 PF14450 Cell division protein FtsA VC395_RS12460 PF03799 Cell division protein FtsQ VC395_RS12460 PF08478 POTRA domain, FtsQ-type VC395_RS12465 PF01225 Mur ligase family, catalytic domain VC395_RS12465 PF02875 Mur ligase family, glutamate ligase domain VC395_RS12465 PF08245 Mur ligase middle domain VC395_RS12470 PF03033 Glycosyltransferase family 28 N-terminal domain VC395_RS12470 PF04101 Glycosyltransferase family 28 C-terminal domain VC395_RS12475 PF01098 VC395_RS12475 VC395_RS12480 PF02875 Mur ligase family, glutamate ligase domain VC395_RS12480 PF08245 Mur ligase middle domain VC395_RS12485 PF00953 Glycosyl transferase family 4 VC395_RS12485 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VC395_RS12490 PF01225 Mur ligase family, catalytic domain VC395_RS12490 PF02875 Mur ligase family, glutamate ligase domain VC395_RS12490 PF08245 Mur ligase middle domain VC395_RS12495 PF01225 Mur ligase family, catalytic domain VC395_RS12495 PF02875 Mur ligase family, glutamate ligase domain VC395_RS12495 PF08245 Mur ligase middle domain VC395_RS12500 PF00905 Penicillin binding protein transpeptidase domain VC395_RS12500 PF03717 Penicillin-binding Protein dimerisation domain VC395_RS12505 PF04999 VC395_RS12505 VC395_RS12510 PF01795 MraW methylase family VC395_RS12515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VC395_RS12515 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC395_RS12520 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VC395_RS12520 PF00364 Biotin-requiring enzyme VC395_RS12520 PF02817 e3 binding domain VC395_RS12525 PF00456 Transketolase, thiamine diphosphate binding domain VC395_RS12530 PF00392 Bacterial regulatory proteins, gntR family VC395_RS12530 PF07729 FCD domain VC395_RS12535 PF00149 Calcineurin-like phosphoesterase VC395_RS12535 PF02872 5'-nucleotidase, C-terminal domain VC395_RS12540 PF01368 DHH family VC395_RS12540 PF02272 DHHA1 domain VC395_RS12545 PF10411 Disulfide bond isomerase protein N-terminus VC395_RS12545 PF13098 Thioredoxin-like domain VC395_RS12550 PF00589 Phage integrase family VC395_RS12550 PF02899 Phage integrase, N-terminal SAM-like domain VC395_RS12555 PF00258 Flavodoxin VC395_RS12560 PF01510 N-acetylmuramoyl-L-alanine amidase VC395_RS12565 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VC395_RS12565 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VC395_RS12570 PF00114 Pilin (bacterial filament) VC395_RS12570 PF13633 Prokaryotic N-terminal methylation site VC395_RS12575 PF00437 Type II/IV secretion system protein VC395_RS12575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VC395_RS12580 PF00482 Type II secretion system (T2SS), protein F VC395_RS12585 PF01478 Type IV leader peptidase family VC395_RS12585 PF06750 VC395_RS12585 VC395_RS12590 PF01121 Dephospho-CoA kinase VC395_RS12595 PF07072 Protein of unknown function (DUF1342) VC395_RS12600 PF03884 Domain of unknown function (DUF329) VC395_RS12605 PF00521 DNA gyrase/topoisomerase IV, subunit A VC395_RS12605 PF03989 DNA gyrase C-terminal domain, beta-propeller VC395_RS12610 PF00204 DNA gyrase B VC395_RS12610 PF00986 DNA gyrase B subunit, carboxyl terminus VC395_RS12610 PF01751 Toprim domain VC395_RS12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS12615 PF05728 Uncharacterised protein family (UPF0227) VC395_RS12620 PF00149 Calcineurin-like phosphoesterase VC395_RS12625 PF06853 VC395_RS12625 VC395_RS12630 PF00293 NUDIX domain VC395_RS12635 PF02321 Outer membrane efflux protein VC395_RS12640 PF00294 pfkB family carbohydrate kinase VC395_RS12640 PF01467 Cytidylyltransferase VC395_RS12645 PF03710 Glutamate-ammonia ligase adenylyltransferase VC395_RS12645 PF08335 GlnD PII-uridylyltransferase VC395_RS12650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VC395_RS12650 PF00672 HAMP domain VC395_RS12655 PF01928 CYTH domain VC395_RS12655 PF05235 CHAD domain VC395_RS12660 PF01865 Protein of unknown function DUF47 VC395_RS12665 PF01384 VC395_RS12665 VC395_RS12670 PF08239 Bacterial SH3 domain VC395_RS12675 PF16537 VC395_RS12675 VC395_RS12680 PF01471 Putative peptidoglycan binding domain VC395_RS12680 PF13401 AAA domain VC395_RS12685 PF01743 Poly A polymerase head domain VC395_RS12685 PF01966 HD domain VC395_RS12685 PF12627 Probable RNA and SrmB- binding site of polymerase A VC395_RS12690 PF00113 Enolase, C-terminal TIM barrel domain VC395_RS12690 PF03952 Enolase, N-terminal domain VC395_RS12695 PF00117 Glutamine amidotransferase class-I VC395_RS12695 PF06418 CTP synthase N-terminus VC395_RS12700 PF03819 MazG nucleotide pyrophosphohydrolase domain VC395_RS12705 PF02824 TGS domain VC395_RS12705 PF04607 Region found in RelA / SpoT proteins VC395_RS12705 PF13291 ACT domain VC395_RS12705 PF13328 HD domain VC395_RS12710 PF01938 TRAM domain VC395_RS12710 PF05958 tRNA (Uracil-5-)-methyltransferase VC395_RS12715 PF00072 Response regulator receiver domain VC395_RS12715 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS12715 PF00672 HAMP domain VC395_RS12715 PF01627 Hpt domain VC395_RS12715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS12715 PF09984 VC395_RS12715 VC395_RS12720 PF00672 HAMP domain VC395_RS12720 PF00990 GGDEF domain VC395_RS12735 PF01648 4'-phosphopantetheinyl transferase superfamily VC395_RS12740 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VC395_RS12745 PF02565 Recombination protein O C terminal VC395_RS12745 PF11967 Recombination protein O N terminal VC395_RS12750 PF01926 50S ribosome-binding GTPase VC395_RS12750 PF07650 KH domain VC395_RS12755 PF00035 Double-stranded RNA binding motif VC395_RS12755 PF14622 Ribonuclease-III-like VC395_RS12760 PF00717 Peptidase S24-like VC395_RS12760 PF10502 Signal peptidase, peptidase S26 VC395_RS12765 PF00009 Elongation factor Tu GTP binding domain VC395_RS12765 PF00679 Elongation factor G C-terminus VC395_RS12765 PF03144 Elongation factor Tu domain 2 VC395_RS12765 PF06421 GTP-binding protein LepA C-terminus VC395_RS12770 PF04246 VC395_RS12770 VC395_RS12775 PF03888 MucB/RseB family VC395_RS12775 PF17188 VC395_RS12775 VC395_RS12780 PF03872 Anti sigma-E protein RseA, N-terminal domain VC395_RS12780 PF03873 Anti sigma-E protein RseA, C-terminal domain VC395_RS12785 PF04542 Sigma-70 region 2 VC395_RS12785 PF08281 Sigma-70, region 4 VC395_RS12795 PF00890 FAD binding domain VC395_RS12795 PF02910 Fumarate reductase flavoprotein C-term VC395_RS12805 PF03937 Flavinator of succinate dehydrogenase VC395_RS12810 PF01571 Aminomethyltransferase folate-binding domain VC395_RS12815 PF06526 Protein of unknown function (DUF1107) VC395_RS12820 PF01494 FAD binding domain VC395_RS12825 PF01494 FAD binding domain VC395_RS12830 PF03695 Uncharacterised protein family (UPF0149) VC395_RS12835 PF05164 Cell division protein ZapA VC395_RS12840 PF01812 5-formyltetrahydrofolate cyclo-ligase family VC395_RS12845 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VC395_RS12850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VC395_RS12850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC395_RS12855 PF10369 Small subunit of acetolactate synthase VC395_RS12855 PF13710 ACT domain VC395_RS12860 PF00205 Thiamine pyrophosphate enzyme, central domain VC395_RS12860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VC395_RS12860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VC395_RS12865 PF00501 AMP-binding enzyme VC395_RS12870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS12870 PF03466 LysR substrate binding domain VC395_RS12875 PF13528 Glycosyl transferase family 1 VC395_RS12880 PF01569 PAP2 superfamily VC395_RS12885 PF00440 Bacterial regulatory proteins, tetR family VC395_RS12885 PF14514 Transcriptional regulator, TetR, C-terminal VC395_RS12890 PF00682 HMGL-like VC395_RS12890 PF08502 LeuA allosteric (dimerisation) domain VC395_RS12895 PF00180 Isocitrate/isopropylmalate dehydrogenase VC395_RS12900 PF00330 Aconitase family (aconitate hydratase) VC395_RS12905 PF00694 Aconitase C-terminal domain VC395_RS12910 PF04784 VC395_RS12910 VC395_RS12950 PF01966 HD domain VC395_RS12950 PF11871 VC395_RS12950 VC395_RS12960 PF06271 VC395_RS12960 VC395_RS12965 PF03739 VC395_RS12965 VC395_RS12970 PF03739 VC395_RS12970 VC395_RS12975 PF00883 Cytosol aminopeptidase family, catalytic domain VC395_RS12975 PF02789 Cytosol aminopeptidase family, N-terminal domain VC395_RS12980 PF04364 DNA polymerase III chi subunit, HolC VC395_RS12985 PF00133 tRNA synthetases class I (I, L, M and V) VC395_RS12985 PF08264 Anticodon-binding domain of tRNA VC395_RS12985 PF10458 Valyl tRNA synthetase tRNA binding arm VC395_RS12990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VC395_RS12990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VC395_RS12995 PF00849 RNA pseudouridylate synthase VC395_RS13000 PF00176 SNF2 family N-terminal domain VC395_RS13000 PF00271 Helicase conserved C-terminal domain VC395_RS13000 PF12137 RNA polymerase recycling family C-terminal VC395_RS13010 PF02562 PhoH-like protein VC395_RS13010 PF13638 PIN domain VC395_RS13015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VC395_RS13015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VC395_RS13020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VC395_RS13020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VC395_RS13025 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VC395_RS13025 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VC395_RS13030 PF01042 Endoribonuclease L-PSP VC395_RS13035 PF01553 Acyltransferase VC395_RS13040 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VC395_RS13045 PF01722 BolA-like protein VC395_RS13050 PF13466 STAS domain VC395_RS13055 PF05494 Toluene tolerance, Ttg2 VC395_RS13060 PF02470 VC395_RS13060 VC395_RS13065 PF02405 VC395_RS13065 VC395_RS13070 PF00005 ABC transporter VC395_RS13080 PF01699 Sodium/calcium exchanger protein VC395_RS13085 PF00571 CBS domain VC395_RS13085 PF01380 SIS domain VC395_RS13090 PF08282 haloacid dehalogenase-like hydrolase VC395_RS13095 PF06835 Lipopolysaccharide-assembly, LptC-related VC395_RS13100 PF03968 OstA-like protein VC395_RS13105 PF00005 ABC transporter VC395_RS13105 PF12399 Branched-chain amino acid ATP-binding cassette transporter VC395_RS13110 PF00309 VC395_RS13110 VC395_RS13110 PF04552 Sigma-54, DNA binding domain VC395_RS13110 PF04963 Sigma-54 factor, core binding domain VC395_RS13115 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VC395_RS13120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VC395_RS13125 PF03668 VC395_RS13125 VC395_RS13130 PF00381 PTS HPr component phosphorylation site VC395_RS13135 PF00571 CBS domain VC395_RS13135 PF01769 Divalent cation transporter VC395_RS13135 PF03448 MgtE intracellular N domain VC395_RS13140 PF01523 Putative modulator of DNA gyrase VC395_RS13145 PF04751 Protein of unknown function (DUF615) VC395_RS13150 PF00005 ABC transporter VC395_RS13155 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS13160 PF13343 Bacterial extracellular solute-binding protein VC395_RS13165 PF02441 Flavoprotein VC395_RS13170 PF01225 Mur ligase family, catalytic domain VC395_RS13170 PF02875 Mur ligase family, glutamate ligase domain VC395_RS13170 PF08245 Mur ligase middle domain VC395_RS13180 PF00316 Fructose-1-6-bisphosphatase VC395_RS13185 PF00719 Inorganic pyrophosphatase VC395_RS13190 PF06094 AIG2-like family VC395_RS13195 PF04357 VC395_RS13195 VC395_RS13200 PF01103 Surface antigen VC395_RS13205 PF01625 Peptide methionine sulfoxide reductase VC395_RS13210 PF09695 VC395_RS13210 VC395_RS13215 PF10795 VC395_RS13215 VC395_RS13220 PF10986 VC395_RS13220 VC395_RS13225 PF00005 ABC transporter VC395_RS13230 PF02687 VC395_RS13230 VC395_RS13230 PF12704 MacB-like periplasmic core domain VC395_RS13235 PF11736 Protein of unknown function (DUF3299) VC395_RS13240 PF10987 VC395_RS13240 VC395_RS13245 PF01583 Adenylylsulphate kinase VC395_RS13250 PF00009 Elongation factor Tu GTP binding domain VC395_RS13255 PF01507 Phosphoadenosine phosphosulfate reductase family VC395_RS13260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VC395_RS13265 PF00149 Calcineurin-like phosphoesterase VC395_RS13265 PF02872 5'-nucleotidase, C-terminal domain VC395_RS13275 PF00270 DEAD/DEAH box helicase VC395_RS13275 PF00271 Helicase conserved C-terminal domain VC395_RS13275 PF03880 DbpA RNA binding domain VC395_RS13280 PF13673 Acetyltransferase (GNAT) domain VC395_RS13285 PF00892 EamA-like transporter family VC395_RS13290 PF04225 Opacity-associated protein A LysM-like domain VC395_RS13290 PF08525 VC395_RS13290 VC395_RS13295 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC395_RS13295 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VC395_RS13300 PF01797 Transposase IS200 like VC395_RS13305 PF11075 VC395_RS13305 VC395_RS13310 PF01196 Ribosomal protein L17 VC395_RS13315 PF01000 RNA polymerase Rpb3/RpoA insert domain VC395_RS13315 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VC395_RS13315 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VC395_RS13320 PF00163 Ribosomal protein S4/S9 N-terminal domain VC395_RS13320 PF01479 S4 domain VC395_RS13325 PF00411 Ribosomal protein S11 VC395_RS13330 PF00416 Ribosomal protein S13/S18 VC395_RS13335 PF00444 Ribosomal protein L36 VC395_RS13340 PF00344 SecY translocase VC395_RS13345 PF00828 Ribosomal protein L18e/L15 VC395_RS13350 PF00327 Ribosomal protein L30p/L7e VC395_RS13355 PF00333 Ribosomal protein S5, N-terminal domain VC395_RS13355 PF03719 Ribosomal protein S5, C-terminal domain VC395_RS13360 PF00861 Ribosomal L18p/L5e family VC395_RS13365 PF00347 Ribosomal protein L6 VC395_RS13370 PF00410 Ribosomal protein S8 VC395_RS13375 PF00253 Ribosomal protein S14p/S29e VC395_RS13380 PF00281 Ribosomal protein L5 VC395_RS13380 PF00673 ribosomal L5P family C-terminus VC395_RS13385 PF00467 KOW motif VC395_RS13385 PF17136 VC395_RS13385 VC395_RS13390 PF00238 Ribosomal protein L14p/L23e VC395_RS13395 PF00366 Ribosomal protein S17 VC395_RS13400 PF00831 Ribosomal L29 protein VC395_RS13405 PF00252 Ribosomal protein L16p/L10e VC395_RS13410 PF00189 Ribosomal protein S3, C-terminal domain VC395_RS13410 PF07650 KH domain VC395_RS13415 PF00237 Ribosomal protein L22p/L17e VC395_RS13420 PF00203 Ribosomal protein S19 VC395_RS13425 PF00181 Ribosomal Proteins L2, RNA binding domain VC395_RS13425 PF03947 Ribosomal Proteins L2, C-terminal domain VC395_RS13430 PF00276 Ribosomal protein L23 VC395_RS13435 PF00573 Ribosomal protein L4/L1 family VC395_RS13440 PF00297 Ribosomal protein L3 VC395_RS13445 PF00338 Ribosomal protein S10p/S20e VC395_RS13450 PF00588 SpoU rRNA Methylase family VC395_RS13450 PF08032 RNA 2'-O ribose methyltransferase substrate binding VC395_RS13455 PF00575 S1 RNA binding domain VC395_RS13455 PF00773 RNB domain VC395_RS13455 PF08206 Ribonuclease B OB domain VC395_RS13455 PF08461 Ribonuclease R winged-helix domain VC395_RS13460 PF00884 Sulfatase VC395_RS13460 PF11893 VC395_RS13460 VC395_RS13465 PF08238 Sel1 repeat VC395_RS13470 PF00709 Adenylosuccinate synthetase VC395_RS13475 PF01112 Asparaginase VC395_RS13480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VC395_RS13485 PF09526 VC395_RS13485 VC395_RS13490 PF00999 Sodium/hydrogen exchanger family VC395_RS13490 PF02254 TrkA-N domain VC395_RS13495 PF02525 Flavodoxin-like fold VC395_RS13500 PF00005 ABC transporter VC395_RS13500 PF09496 Cenp-O kinetochore centromere component VC395_RS13500 PF12848 ABC transporter VC395_RS13505 PF09523 VC395_RS13505 VC395_RS13510 PF00561 alpha/beta hydrolase fold VC395_RS13515 PF06794 Uncharacterised protein family (UPF0270) VC395_RS13520 PF00485 Phosphoribulokinase / Uridine kinase family VC395_RS13525 PF00027 Cyclic nucleotide-binding domain VC395_RS13525 PF00325 Bacterial regulatory proteins, crp family VC395_RS13530 PF07063 Domain of unknown function (DUF1338) VC395_RS13535 PF00171 Aldehyde dehydrogenase family VC395_RS13540 PF04958 Arginine N-succinyltransferase beta subunit VC395_RS13545 PF00202 Aminotransferase class-III VC395_RS13550 PF00117 Glutamine amidotransferase class-I VC395_RS13555 PF00919 Uncharacterized protein family UPF0004 VC395_RS13555 PF04055 Radical SAM superfamily VC395_RS13560 PF00932 Lamin Tail Domain VC395_RS13565 PF00497 Bacterial extracellular solute-binding proteins, family 3 VC395_RS13570 PF00579 tRNA synthetases class I (W and Y) VC395_RS13575 PF13419 Haloacid dehalogenase-like hydrolase VC395_RS13580 PF00834 Ribulose-phosphate 3 epimerase family VC395_RS13585 PF02086 D12 class N6 adenine-specific DNA methyltransferase VC395_RS13590 PF05036 Sporulation related domain VC395_RS13590 PF13401 AAA domain VC395_RS13595 PF01761 3-dehydroquinate synthase VC395_RS13600 PF01202 Shikimate kinase VC395_RS13605 PF00263 VC395_RS13605 VC395_RS13605 PF03958 Bacterial type II/III secretion system short domain VC395_RS13610 PF04351 Pilus assembly protein, PilP VC395_RS13615 PF04350 Pilus assembly protein, PilO VC395_RS13620 PF05137 VC395_RS13620 VC395_RS13625 PF11104 Type IV pilus assembly protein PilM; VC395_RS13630 PF00905 Penicillin binding protein transpeptidase domain VC395_RS13630 PF00912 Transglycosylase VC395_RS13630 PF17092 VC395_RS13630 VC395_RS13635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VC395_RS13635 PF03466 LysR substrate binding domain VC395_RS13640 PF00462 Glutaredoxin VC395_RS13640 PF08534 Redoxin VC395_RS13645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VC395_RS13645 PF07992 Pyridine nucleotide-disulphide oxidoreductase VC395_RS13650 PF12292 VC395_RS13650 VC395_RS13655 PF00206 Lyase VC395_RS13655 PF14698 Argininosuccinate lyase C-terminal VC395_RS13660 PF00764 Arginosuccinate synthase VC395_RS13665 PF00696 Amino acid kinase family VC395_RS13670 PF01118 Semialdehyde dehydrogenase, NAD binding domain VC395_RS13670 PF02774 Semialdehyde dehydrogenase, dimerisation domain VC395_RS13675 PF01546 Peptidase family M20/M25/M40 VC395_RS13675 PF07687 Peptidase dimerisation domain VC395_RS13680 PF00311 Phosphoenolpyruvate carboxylase VC395_RS13685 PF03551 Transcriptional regulator PadR-like family VC395_RS13685 PF10400 Virulence activator alpha C-term VC395_RS13690 PF00132 Bacterial transferase hexapeptide (six repeats) VC395_RS13690 PF06426 Serine acetyltransferase, N-terminal VC395_RS13695 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VC395_RS13695 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VC395_RS13700 PF02556 Preprotein translocase subunit SecB VC395_RS13705 PF00581 Rhodanese-like domain VC395_RS13710 PF00152 tRNA synthetases class II (D, K and N) VC395_RS13715 PF00890 FAD binding domain VC395_RS13715 PF02910 Fumarate reductase flavoprotein C-term VC395_RS13720 PF13085 2Fe-2S iron-sulfur cluster binding domain VC395_RS13720 PF13183 4Fe-4S dicluster domain VC395_RS13725 PF02300 Fumarate reductase subunit C VC395_RS13730 PF02313 Fumarate reductase subunit D VC395_RS13735 PF01132 Elongation factor P (EF-P) OB domain VC395_RS13735 PF08207 Elongation factor P (EF-P) KOW-like domain VC395_RS13735 PF09285 Elongation factor P, C-terminal VC395_RS13740 PF04055 Radical SAM superfamily VC395_RS13740 PF13353 4Fe-4S single cluster domain VC395_RS13750 PF00118 TCP-1/cpn60 chaperonin family VC395_RS13755 PF00166 Chaperonin 10 Kd subunit VC395_RS13760 PF13412 Winged helix-turn-helix DNA-binding VC395_RS13765 PF11333 VC395_RS13765 VC395_RS13770 PF05656 VC395_RS13770 VC395_RS13775 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase VC395_RS13780 PF00121 Triosephosphate isomerase VC395_RS13785 PF01554 MatE VC395_RS13790 PF03737 Demethylmenaquinone methyltransferase VC395_RS13795 PF01040 UbiA prenyltransferase family VC395_RS13800 PF00004 ATPase family associated with various cellular activities (AAA) VC395_RS13800 PF07724 AAA domain (Cdc48 subfamily) VC395_RS13800 PF10431 C-terminal, D2-small domain, of ClpB protein VC395_RS13805 PF00227 Proteasome subunit VC395_RS13810 PF05036 Sporulation related domain VC395_RS13815 PF00356 Bacterial regulatory proteins, lacI family VC395_RS13815 PF13377 Periplasmic binding protein-like domain VC395_RS13820 PF00270 DEAD/DEAH box helicase VC395_RS13820 PF00271 Helicase conserved C-terminal domain VC395_RS13825 PF01197 Ribosomal protein L31 VC395_RS13830 PF00390 Malic enzyme, N-terminal domain VC395_RS13830 PF03949 Malic enzyme, NAD binding domain VC395_RS13835 PF01340 Met Apo-repressor, MetJ VC395_RS13840 PF01053 Cys/Met metabolism PLP-dependent enzyme VC395_RS13845 PF00696 Amino acid kinase family VC395_RS13845 PF00742 Homoserine dehydrogenase VC395_RS13845 PF03447 Homoserine dehydrogenase, NAD binding domain VC395_RS13850 PF02219 Methylenetetrahydrofolate reductase VC395_RS13855 PF06005 Protein of unknown function (DUF904) VC395_RS13860 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VC395_RS13865 PF00365 Phosphofructokinase VC395_RS13870 PF01545 Cation efflux family VC395_RS13870 PF16916 VC395_RS13870 VC395_RS13875 PF07813 LTXXQ motif family protein VC395_RS13880 PF00072 Response regulator receiver domain VC395_RS13880 PF00486 Transcriptional regulatory protein, C terminal VC395_RS13885 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS13885 PF00672 HAMP domain VC395_RS13885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS13885 PF16527 VC395_RS13885 VC395_RS13890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VC395_RS13890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VC395_RS13895 PF00588 SpoU rRNA Methylase family VC395_RS13900 PF04186 VC395_RS13900 VC395_RS13905 PF00990 GGDEF domain VC395_RS13910 PF00206 Lyase VC395_RS13910 PF10415 Fumarase C C-terminus VC395_RS13915 PF03605 VC395_RS13915 VC395_RS13920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VC395_RS13920 PF03714 Bacterial pullanase-associated domain VC395_RS13925 PF11852 Domain of unknown function (DUF3372) VC395_RS13930 PF02683 VC395_RS13930 VC395_RS13930 PF11412 Disulphide bond corrector protein DsbC VC395_RS13930 PF13899 Thioredoxin-like VC395_RS13935 PF00072 Response regulator receiver domain VC395_RS13935 PF00196 Bacterial regulatory proteins, luxR family VC395_RS13940 PF00999 Sodium/hydrogen exchanger family VC395_RS13940 PF02080 TrkA-C domain VC395_RS13940 PF03471 Transporter associated domain VC395_RS13945 PF13937 VC395_RS13945 VC395_RS13950 PF00474 Sodium:solute symporter family VC395_RS13955 PF02592 VC395_RS13955 VC395_RS13960 PF00625 Guanylate kinase VC395_RS13965 PF01192 RNA polymerase Rpb6 VC395_RS13970 PF02824 TGS domain VC395_RS13970 PF04607 Region found in RelA / SpoT proteins VC395_RS13970 PF13291 ACT domain VC395_RS13970 PF13328 HD domain VC395_RS13975 PF00270 DEAD/DEAH box helicase VC395_RS13975 PF00271 Helicase conserved C-terminal domain VC395_RS13975 PF17191 VC395_RS13975 VC395_RS13980 PF00860 Permease family VC395_RS13985 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS13985 PF00672 HAMP domain VC395_RS13985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS13990 PF00072 Response regulator receiver domain VC395_RS13990 PF00486 Transcriptional regulatory protein, C terminal VC395_RS13995 PF01272 Transcription elongation factor, GreA/GreB, C-term VC395_RS13995 PF03449 Transcription elongation factor, N-terminal VC395_RS14000 PF00575 S1 RNA binding domain VC395_RS14000 PF09371 Tex-like protein N-terminal domain VC395_RS14000 PF12836 Helix-hairpin-helix motif VC395_RS14000 PF16921 VC395_RS14000 VC395_RS14010 PF00561 alpha/beta hydrolase fold VC395_RS14015 PF00156 Phosphoribosyl transferase domain VC395_RS14020 PF01106 NifU-like domain VC395_RS14020 PF01521 Iron-sulphur cluster biosynthesis VC395_RS14025 PF00293 NUDIX domain VC395_RS14030 PF00459 Inositol monophosphatase family VC395_RS14035 PF01203 VC395_RS14035 VC395_RS14040 PF04612 Type II secretion system (T2SS), protein M VC395_RS14045 PF05134 Type II secretion system (T2SS), protein L VC395_RS14045 PF12693 GspL periplasmic domain VC395_RS14050 PF03934 Type II secretion system (T2SS), protein K VC395_RS14055 PF11612 Type II secretion system (T2SS), protein J VC395_RS14055 PF13633 Prokaryotic N-terminal methylation site VC395_RS14060 PF02501 Type II secretion system (T2SS), protein I VC395_RS14060 PF13633 Prokaryotic N-terminal methylation site VC395_RS14065 PF12019 Type II transport protein GspH VC395_RS14070 PF08334 Type II secretion system (T2SS), protein G VC395_RS14070 PF13544 VC395_RS14070 VC395_RS14075 PF00482 Type II secretion system (T2SS), protein F VC395_RS14080 PF00437 Type II/IV secretion system protein VC395_RS14085 PF00263 VC395_RS14085 VC395_RS14085 PF03958 Bacterial type II/III secretion system short domain VC395_RS14090 PF11356 Type IV pilus biogenesis VC395_RS14095 PF01479 S4 domain VC395_RS14100 PF01430 Hsp33 protein VC395_RS14105 PF01293 Phosphoenolpyruvate carboxykinase VC395_RS14110 PF05170 VC395_RS14110 VC395_RS14115 PF09500 Putative thioesterase (yiiD_Cterm) VC395_RS14115 PF13673 Acetyltransferase (GNAT) domain VC395_RS14120 PF02580 D-Tyr-tRNA(Tyr) deacylase VC395_RS14125 PF03631 VC395_RS14125 VC395_RS14130 PF13521 AAA domain VC395_RS14135 PF00009 Elongation factor Tu GTP binding domain VC395_RS14135 PF00679 Elongation factor G C-terminus VC395_RS14135 PF03144 Elongation factor Tu domain 2 VC395_RS14145 PF00120 Glutamine synthetase, catalytic domain VC395_RS14145 PF03951 Glutamine synthetase, beta-Grasp domain VC395_RS14150 PF13511 VC395_RS14150 VC395_RS14155 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS14155 PF00989 PAS fold VC395_RS14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS14160 PF00072 Response regulator receiver domain VC395_RS14160 PF00158 Sigma-54 interaction domain VC395_RS14160 PF02954 Bacterial regulatory protein, Fis family VC395_RS14165 PF00563 EAL domain VC395_RS14165 PF00672 HAMP domain VC395_RS14165 PF00990 GGDEF domain VC395_RS14165 PF02743 Cache domain VC395_RS14170 PF00962 Adenosine/AMP deaminase VC395_RS14460 PF01295 VC395_RS14460 VC395_RS14570 PF01553 Acyltransferase VC395_RS14605 PF03109 VC395_RS14605 VC395_RS14800 PF02386 Cation transport protein VC395_RS14905 PF02092 VC395_RS14905 VC395_RS15010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VC395_RS15185 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC395_RS15190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VC395_RS15210 PF00528 Binding-protein-dependent transport system inner membrane component VC395_RS15310 PF09382 RQC domain VC395_RS15340 PF07715 TonB-dependent Receptor Plug Domain VC395_RS15360 PF01032 FecCD transport family VC395_RS15750 PF00589 Phage integrase family VC395_RS15785 PF09344 CT1975-like protein VC395_RS15945 PF00512 His Kinase A (phospho-acceptor) domain VC395_RS15945 PF12860 VC395_RS15945 VC395_RS16015 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VC395_RS16030 PF00175 Oxidoreductase NAD-binding domain VC395_RS16155 PF04563 RNA polymerase beta subunit VC395_RS16185 PF00562 RNA polymerase Rpb2, domain 6 VC395_RS16190 PF00562 RNA polymerase Rpb2, domain 6 VC395_RS16190 PF04560 RNA polymerase Rpb2, domain 7 VC395_RS16215 PF04983 RNA polymerase Rpb1, domain 3 VC395_RS16360 PF01520 N-acetylmuramoyl-L-alanine amidase VC395_RS16460 PF00009 Elongation factor Tu GTP binding domain VC395_RS16680 PF02574 Homocysteine S-methyltransferase VC395_RS16705 PF02965 Vitamin B12 dependent methionine synthase, activation domain VC395_RS16785 PF17157 VC395_RS16785 VC395_RS16900 PF13116 VC395_RS16900 VC395_RS17345 PF02464 Competence-damaged protein VC395_RS17380 PF00682 HMGL-like VC395_RS17405 PF00675 Insulinase (Peptidase family M16) VC395_RS17405 PF05193 Peptidase M16 inactive domain VC395_RS17430 PF00448 SRP54-type protein, GTPase domain VC395_RS17545 PF00916 VC395_RS17545 VC395_RS17575 PF03749 Sugar fermentation stimulation protein VC395_RS17605 PF00912 Transglycosylase VC395_RS17605 PF14814 Bifunctional transglycosylase second domain VC395_RS17760 PF00672 HAMP domain VC395_RS18145 PF00672 HAMP domain VC395_RS18145 PF00990 GGDEF domain VC395_RS18250 PF13090 Polyphosphate kinase C-terminal domain VC395_RS18380 PF00012 Hsp70 protein VC395_RS18410 PF02601 VC395_RS18410 VC395_RS18410 PF13742 VC395_RS18410 VC395_RS18805 PF13531 Bacterial extracellular solute-binding protein VC395_RS18840 PF13402 Peptidase M60-like family VC395_RS19135 PF00873 AcrB/AcrD/AcrF family VC395_RS19140 PF00873 AcrB/AcrD/AcrF family VC395_RS19185 PF14667 Polysaccharide biosynthesis C-terminal domain VC395_RS19230 PF16458 VC395_RS19230 VC395_RS19400 PF00291 Pyridoxal-phosphate dependent enzyme VC395_RS19460 PF00183 Hsp90 protein VC395_RS19460 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VC395_RS19475 PF00762 Ferrochelatase VC395_RS19610 PF03116 VC395_RS19610 VC395_RS19615 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VC395_RS19615 PF10531 SLBB domain VC395_RS19615 PF12838 4Fe-4S dicluster domain VC395_RS19645 PF09339 IclR helix-turn-helix domain