VC395_RS00005 SM00360 RNA recognition motif VC395_RS00040 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS00105 SM00857 Resolvase, N terminal domain VC395_RS00160 SM00382 ATPases associated with a variety of cellular activities VC395_RS00165 SM00382 ATPases associated with a variety of cellular activities VC395_RS00165 SM00962 SRP54-type protein, GTPase domain VC395_RS00165 SM00963 SRP54-type protein, helical bundle domain VC395_RS00240 SM01144 VC395_RS00240 VC395_RS00245 SM00052 Putative diguanylate phosphodiesterase VC395_RS00245 SM00267 diguanylate cyclase VC395_RS00245 SM00897 FIST N domain VC395_RS00245 SM01204 VC395_RS00245 VC395_RS00280 SM01219 VC395_RS00280 VC395_RS00315 SM00729 Elongator protein 3, MiaB family, Radical SAM VC395_RS00345 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VC395_RS00345 SM00474 3'-5' exonuclease VC395_RS00345 SM00475 5'-3' exonuclease VC395_RS00345 SM00482 DNA polymerase A domain VC395_RS00355 SM01004 Delta-aminolevulinic acid dehydratase VC395_RS00370 SM00450 Rhodanese Homology Domain VC395_RS00380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VC395_RS00380 SM00091 PAS domain VC395_RS00380 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS00405 SM00563 Phosphate acyltransferases VC395_RS00510 SM00052 Putative diguanylate phosphodiesterase VC395_RS00510 SM00091 PAS domain VC395_RS00510 SM00267 diguanylate cyclase VC395_RS00515 SM00344 helix_turn_helix ASNC type VC395_RS00540 SM00876 Biotin and Thiamin Synthesis associated domain VC395_RS00635 SM01001 AIR carboxylase VC395_RS00660 SM00257 Lysin motif VC395_RS00730 SM00563 Phosphate acyltransferases VC395_RS00735 SM00382 ATPases associated with a variety of cellular activities VC395_RS00765 SM00829 Enoylreductase VC395_RS00820 SM00387 Histidine kinase-like ATPases VC395_RS00820 SM00433 TopoisomeraseII VC395_RS00830 SM00480 DNA polymerase III beta subunit VC395_RS00835 SM00382 ATPases associated with a variety of cellular activities VC395_RS00835 SM00760 Bacterial dnaA protein helix-turn-helix domain VC395_RS00840 SM00062 Bacterial periplasmic substrate-binding proteins VC395_RS00850 SM00382 ATPases associated with a variety of cellular activities VC395_RS00865 SM01234 VC395_RS00865 VC395_RS00890 SM01228 VC395_RS00890 VC395_RS00905 SM00470 ParB-like nuclease domain VC395_RS00945 SM00382 ATPases associated with a variety of cellular activities VC395_RS01110 SM00382 ATPases associated with a variety of cellular activities VC395_RS01160 SM00342 helix_turn_helix, arabinose operon control protein VC395_RS01175 SM00341 Helicase and RNase D C-terminal VC395_RS01175 SM00487 DEAD-like helicases superfamily VC395_RS01175 SM00490 helicase superfamily c-terminal domain VC395_RS01175 SM00956 VC395_RS01175 VC395_RS01190 SM00382 ATPases associated with a variety of cellular activities VC395_RS01200 SM00382 ATPases associated with a variety of cellular activities VC395_RS01275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS01275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS01275 SM01049 VC395_RS01275 VC395_RS01300 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VC395_RS01300 SM01232 VC395_RS01300 VC395_RS01425 SM00382 ATPases associated with a variety of cellular activities VC395_RS01495 SM00849 Metallo-beta-lactamase superfamily VC395_RS01495 SM01027 Beta-Casp domain VC395_RS01505 SM00986 Uracil DNA glycosylase superfamily VC395_RS01505 SM00987 UreE urease accessory protein, C-terminal domain VC395_RS01540 SM00411 bacterial (prokaryotic) histone like domain VC395_RS01550 SM01209 VC395_RS01550 VC395_RS01550 SM01210 VC395_RS01550 VC395_RS01555 SM00798 AICARFT/IMPCHase bienzyme VC395_RS01555 SM00851 MGS-like domain VC395_RS01560 SM00422 helix_turn_helix, mercury resistance VC395_RS01565 SM00862 Transcriptional regulatory protein, C terminal VC395_RS01580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS01580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS01580 SM01049 VC395_RS01580 VC395_RS01615 SM00354 helix_turn _helix lactose operon repressor VC395_RS01630 SM00487 DEAD-like helicases superfamily VC395_RS01630 SM00490 helicase superfamily c-terminal domain VC395_RS01645 SM01101 VC395_RS01645 VC395_RS01710 SM00878 Biotin carboxylase C-terminal domain VC395_RS01730 SM00479 VC395_RS01730 VC395_RS01750 SM00387 Histidine kinase-like ATPases VC395_RS01750 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS01750 SM00448 cheY-homologous receiver domain VC395_RS01760 SM00487 DEAD-like helicases superfamily VC395_RS01760 SM00490 helicase superfamily c-terminal domain VC395_RS01770 SM00357 Cold shock protein domain VC395_RS01770 SM00382 ATPases associated with a variety of cellular activities VC395_RS01770 SM00959 Rho termination factor, N-terminal domain VC395_RS01825 SM00155 Phospholipase D. Active site motifs. VC395_RS01885 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VC395_RS01885 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VC395_RS01890 SM00649 Ribosomal protein L11/L12 VC395_RS01915 SM00663 RNA polymerase I subunit A N-terminus VC395_RS01975 SM00479 VC395_RS01975 VC395_RS02030 SM00257 Lysin motif VC395_RS02030 SM00646 VC395_RS02030 VC395_RS02035 SM00853 MutL C terminal dimerisation domain VC395_RS02035 SM01340 VC395_RS02035 VC395_RS02055 SM00244 prohibitin homologues VC395_RS02060 SM00244 prohibitin homologues VC395_RS02075 SM00320 WD40 repeats VC395_RS02115 SM00838 Elongation factor G C-terminus VC395_RS02115 SM00889 Elongation factor G, domain IV VC395_RS02160 SM00382 ATPases associated with a variety of cellular activities VC395_RS02165 SM01005 Alanine racemase, C-terminal domain VC395_RS02270 SM01018 B12 binding domain VC395_RS02300 SM00421 helix_turn_helix, Lux Regulon VC395_RS02310 SM00052 Putative diguanylate phosphodiesterase VC395_RS02310 SM00267 diguanylate cyclase VC395_RS02330 SM00965 Secretin and TonB N terminus short domain VC395_RS02340 SM00028 Tetratricopeptide repeats VC395_RS02345 SM00382 ATPases associated with a variety of cellular activities VC395_RS02415 SM00316 Ribosomal protein S1-like RNA-binding domain VC395_RS02530 SM00650 Ribosomal RNA adenine dimethylases VC395_RS02550 SM00271 DnaJ molecular chaperone homology domain VC395_RS02580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS02580 SM01049 VC395_RS02580 VC395_RS02615 SM00478 endonuclease III VC395_RS02615 SM00525 VC395_RS02615 VC395_RS02630 SM00729 Elongator protein 3, MiaB family, Radical SAM VC395_RS02645 SM01152 VC395_RS02645 VC395_RS02665 SM00382 ATPases associated with a variety of cellular activities VC395_RS02675 SM00421 helix_turn_helix, Lux Regulon VC395_RS02680 SM00363 S4 RNA-binding domain VC395_RS02685 SM00732 Likely ribonuclease with RNase H fold. VC395_RS02710 SM00731 SprT homologues. VC395_RS02725 SM00861 Transketolase, pyrimidine binding domain VC395_RS02740 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC395_RS02785 SM00420 helix_turn_helix, Deoxyribose operon repressor VC395_RS02785 SM01134 VC395_RS02785 VC395_RS02800 SM00563 Phosphate acyltransferases VC395_RS02815 SM00400 zinc finger VC395_RS02815 SM00493 VC395_RS02815 VC395_RS02815 SM00766 DNA primase DnaG DnaB-binding VC395_RS02840 SM01207 VC395_RS02840 VC395_RS02845 SM00905 Dihydroneopterin aldolase VC395_RS02890 SM00257 Lysin motif VC395_RS02900 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VC395_RS02900 SM00534 ATPase domain of DNA mismatch repair MUTS family VC395_RS02925 SM00382 ATPases associated with a variety of cellular activities VC395_RS02935 SM00382 ATPases associated with a variety of cellular activities VC395_RS02945 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VC395_RS03020 SM00829 Enoylreductase VC395_RS03045 SM01091 Transporter associated domain VC395_RS03055 SM00382 ATPases associated with a variety of cellular activities VC395_RS03055 SM00962 SRP54-type protein, GTPase domain VC395_RS03055 SM00963 SRP54-type protein, helical bundle domain VC395_RS03080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VC395_RS03085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VC395_RS03140 SM00749 bacterial OsmY and nodulation domain VC395_RS03175 SM00947 Carbonic anhydrase VC395_RS03185 SM00382 ATPases associated with a variety of cellular activities VC395_RS03235 SM00487 DEAD-like helicases superfamily VC395_RS03235 SM00490 helicase superfamily c-terminal domain VC395_RS03235 SM00847 Helicase associated domain (HA2) Add an annotation VC395_RS03260 SM00938 Nitrogen regulatory protein P-II VC395_RS03280 SM00382 ATPases associated with a variety of cellular activities VC395_RS03290 SM01068 Putative carbohydrate binding domain VC395_RS03310 SM00382 ATPases associated with a variety of cellular activities VC395_RS03315 SM00382 ATPases associated with a variety of cellular activities VC395_RS03340 SM00091 PAS domain VC395_RS03340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS03340 SM00387 Histidine kinase-like ATPases VC395_RS03340 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS03340 SM00448 cheY-homologous receiver domain VC395_RS03385 SM00363 S4 RNA-binding domain VC395_RS03405 SM01103 VC395_RS03405 VC395_RS03415 SM00382 ATPases associated with a variety of cellular activities VC395_RS03450 SM00316 Ribosomal protein S1-like RNA-binding domain VC395_RS03450 SM00322 K homology RNA-binding domain VC395_RS03470 SM01387 VC395_RS03470 VC395_RS03475 SM00316 Ribosomal protein S1-like RNA-binding domain VC395_RS03475 SM00322 K homology RNA-binding domain VC395_RS03480 SM00028 Tetratricopeptide repeats VC395_RS03485 SM00347 helix_turn_helix multiple antibiotic resistance protein VC395_RS03505 SM00052 Putative diguanylate phosphodiesterase VC395_RS03505 SM00091 PAS domain VC395_RS03505 SM00267 diguanylate cyclase VC395_RS03530 SM00052 Putative diguanylate phosphodiesterase VC395_RS03530 SM00267 diguanylate cyclase VC395_RS03540 SM00487 DEAD-like helicases superfamily VC395_RS03540 SM00490 helicase superfamily c-terminal domain VC395_RS03555 SM00937 VC395_RS03555 VC395_RS03565 SM00382 ATPases associated with a variety of cellular activities VC395_RS03580 SM00927 DNA mismatch repair enzyme MutH VC395_RS03590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VC395_RS03620 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VC395_RS03635 SM00904 Riboflavin kinase VC395_RS03690 SM00448 cheY-homologous receiver domain VC395_RS03690 SM00850 LytTr DNA-binding domain VC395_RS03705 SM00830 Chorismate mutase type II VC395_RS03715 SM00382 ATPases associated with a variety of cellular activities VC395_RS03735 SM00052 Putative diguanylate phosphodiesterase VC395_RS03735 SM00267 diguanylate cyclase VC395_RS03745 SM00830 Chorismate mutase type II VC395_RS03760 SM00363 S4 RNA-binding domain VC395_RS03770 SM00382 ATPases associated with a variety of cellular activities VC395_RS03770 SM01086 C-terminal, D2-small domain, of ClpB protein VC395_RS03825 SM00448 cheY-homologous receiver domain VC395_RS03825 SM00862 Transcriptional regulatory protein, C terminal VC395_RS03830 SM00091 PAS domain VC395_RS03830 SM00387 Histidine kinase-like ATPases VC395_RS03830 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS03860 SM00382 ATPases associated with a variety of cellular activities VC395_RS03900 SM00116 Domain in cystathionine beta-synthase and other proteins. VC395_RS03920 SM01323 VC395_RS03920 VC395_RS03965 SM00271 DnaJ molecular chaperone homology domain VC395_RS03990 SM00562 VC395_RS03990 VC395_RS04000 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS04020 SM00564 beta-propeller repeat VC395_RS04025 SM00382 ATPases associated with a variety of cellular activities VC395_RS04045 SM00116 Domain in cystathionine beta-synthase and other proteins. VC395_RS04045 SM01240 VC395_RS04045 VC395_RS04055 SM00495 Chitin-binding domain type 3 VC395_RS04105 SM00382 ATPases associated with a variety of cellular activities VC395_RS04120 SM00849 Metallo-beta-lactamase superfamily VC395_RS04150 SM00448 cheY-homologous receiver domain VC395_RS04155 SM00091 PAS domain VC395_RS04155 SM00387 Histidine kinase-like ATPases VC395_RS04180 SM00764 Citrate lyase ligase C-terminal domain VC395_RS04255 SM00487 DEAD-like helicases superfamily VC395_RS04255 SM00490 helicase superfamily c-terminal domain VC395_RS04265 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS04300 SM00060 Fibronectin type 3 domain VC395_RS04320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS04325 SM00862 Transcriptional regulatory protein, C terminal VC395_RS04385 SM00342 helix_turn_helix, arabinose operon control protein VC395_RS04395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS04395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS04425 SM01276 VC395_RS04425 VC395_RS04480 SM00271 DnaJ molecular chaperone homology domain VC395_RS04530 SM00062 Bacterial periplasmic substrate-binding proteins VC395_RS04540 SM01211 VC395_RS04540 VC395_RS04545 SM01321 VC395_RS04545 VC395_RS04630 SM00861 Transketolase, pyrimidine binding domain VC395_RS04655 SM00981 VC395_RS04655 VC395_RS04675 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VC395_RS04675 SM00475 5'-3' exonuclease VC395_RS04685 SM00267 diguanylate cyclase VC395_RS04690 SM00028 Tetratricopeptide repeats VC395_RS04720 SM00382 ATPases associated with a variety of cellular activities VC395_RS04720 SM00930 VC395_RS04720 VC395_RS04730 SM00354 helix_turn _helix lactose operon repressor VC395_RS04740 SM00642 Alpha-amylase domain VC395_RS04775 SM00226 Low molecular weight phosphatase family VC395_RS04785 SM00984 UDP binding domain VC395_RS04845 SM00710 Parallel beta-helix repeats VC395_RS04910 SM00729 Elongator protein 3, MiaB family, Radical SAM VC395_RS04930 SM00936 Penicillin-binding protein 5, C-terminal domain VC395_RS04985 SM00116 Domain in cystathionine beta-synthase and other proteins. VC395_RS04985 SM01091 Transporter associated domain VC395_RS05000 SM00729 Elongator protein 3, MiaB family, Radical SAM VC395_RS05040 SM00771 ZipA, C-terminal domain (FtsZ-binding) VC395_RS05045 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VC395_RS05045 SM00292 breast cancer carboxy-terminal domain VC395_RS05045 SM00532 Ligase N family VC395_RS05060 SM00422 helix_turn_helix, mercury resistance VC395_RS05070 SM00244 prohibitin homologues VC395_RS05105 SM00862 Transcriptional regulatory protein, C terminal VC395_RS05110 SM00387 Histidine kinase-like ATPases VC395_RS05130 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VC395_RS05130 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VC395_RS05205 SM00479 VC395_RS05205 VC395_RS05230 SM00478 endonuclease III VC395_RS05230 SM00525 VC395_RS05230 VC395_RS05240 SM00900 VC395_RS05240 VC395_RS05270 SM00487 DEAD-like helicases superfamily VC395_RS05270 SM00490 helicase superfamily c-terminal domain VC395_RS05280 SM00382 ATPases associated with a variety of cellular activities VC395_RS05280 SM00448 cheY-homologous receiver domain VC395_RS05295 SM00729 Elongator protein 3, MiaB family, Radical SAM VC395_RS05300 SM00852 Probable molybdopterin binding domain VC395_RS05320 SM00267 diguanylate cyclase VC395_RS05325 SM00116 Domain in cystathionine beta-synthase and other proteins. VC395_RS05375 SM00226 Low molecular weight phosphatase family VC395_RS05425 SM00448 cheY-homologous receiver domain VC395_RS05445 SM00382 ATPases associated with a variety of cellular activities VC395_RS05455 SM00493 VC395_RS05455 VC395_RS05485 SM00344 helix_turn_helix ASNC type VC395_RS05510 SM00062 Bacterial periplasmic substrate-binding proteins VC395_RS05510 SM00267 diguanylate cyclase VC395_RS05515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VC395_RS05520 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC395_RS05550 SM00342 helix_turn_helix, arabinose operon control protein VC395_RS05575 SM00448 cheY-homologous receiver domain VC395_RS05580 SM00448 cheY-homologous receiver domain VC395_RS05590 SM00387 Histidine kinase-like ATPases VC395_RS05590 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS05595 SM00387 Histidine kinase-like ATPases VC395_RS05600 SM00052 Putative diguanylate phosphodiesterase VC395_RS05600 SM00448 cheY-homologous receiver domain VC395_RS05605 SM00448 cheY-homologous receiver domain VC395_RS05610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS05610 SM00387 Histidine kinase-like ATPases VC395_RS05635 SM00382 ATPases associated with a variety of cellular activities VC395_RS05640 SM00382 ATPases associated with a variety of cellular activities VC395_RS05685 SM00267 diguanylate cyclase VC395_RS05705 SM00382 ATPases associated with a variety of cellular activities VC395_RS05720 SM00729 Elongator protein 3, MiaB family, Radical SAM VC395_RS05720 SM00876 Biotin and Thiamin Synthesis associated domain VC395_RS05810 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS06075 SM00528 Domain in histone-like proteins of HNS family VC395_RS06135 SM00357 Cold shock protein domain VC395_RS06145 SM00382 ATPases associated with a variety of cellular activities VC395_RS06145 SM01086 C-terminal, D2-small domain, of ClpB protein VC395_RS06200 SM00448 cheY-homologous receiver domain VC395_RS06205 SM00387 Histidine kinase-like ATPases VC395_RS06525 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS06570 SM00481 DNA polymerase alpha chain like domain VC395_RS06580 SM00363 S4 RNA-binding domain VC395_RS06585 SM00382 ATPases associated with a variety of cellular activities VC395_RS06590 SM00382 ATPases associated with a variety of cellular activities VC395_RS06610 SM00267 diguanylate cyclase VC395_RS06625 SM00919 Malic enzyme, NAD binding domain VC395_RS06625 SM01274 VC395_RS06625 VC395_RS06650 SM00271 DnaJ molecular chaperone homology domain VC395_RS06650 SM00671 Sel1-like repeats. VC395_RS06680 SM00020 Trypsin-like serine protease VC395_RS06710 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC395_RS06710 SM00866 VC395_RS06710 VC395_RS06725 SM00841 Elongation factor P, C-terminal VC395_RS06725 SM01185 VC395_RS06725 VC395_RS06735 SM00052 Putative diguanylate phosphodiesterase VC395_RS06740 SM00486 DNA polymerase type-B family VC395_RS06745 SM00421 helix_turn_helix, Lux Regulon VC395_RS06745 SM00448 cheY-homologous receiver domain VC395_RS06750 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VC395_RS06750 SM00465 GIY-YIG type nucleases (URI domain) VC395_RS06780 SM00267 diguanylate cyclase VC395_RS06795 SM00873 B3/4 domain VC395_RS06795 SM00874 tRNA synthetase B5 domain VC395_RS06795 SM00896 Ferredoxin-fold anticodon binding domain VC395_RS06800 SM00411 bacterial (prokaryotic) histone like domain VC395_RS06880 SM00855 Phosphoglycerate mutase family VC395_RS06895 SM00382 ATPases associated with a variety of cellular activities VC395_RS06910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS06910 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS06910 SM01049 VC395_RS06910 VC395_RS06925 SM00852 Probable molybdopterin binding domain VC395_RS06955 SM00434 DNA Topoisomerase IV VC395_RS06960 SM00450 Rhodanese Homology Domain VC395_RS06965 SM00342 helix_turn_helix, arabinose operon control protein VC395_RS07015 SM00849 Metallo-beta-lactamase superfamily VC395_RS07045 SM00387 Histidine kinase-like ATPases VC395_RS07045 SM01049 VC395_RS07045 VC395_RS07050 SM00421 helix_turn_helix, Lux Regulon VC395_RS07050 SM00448 cheY-homologous receiver domain VC395_RS07055 SM00347 helix_turn_helix multiple antibiotic resistance protein VC395_RS07065 SM00495 Chitin-binding domain type 3 VC395_RS07095 SM00354 helix_turn _helix lactose operon repressor VC395_RS07110 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS07110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS07115 SM00479 VC395_RS07115 VC395_RS07120 SM00100 Cyclic nucleotide-monophosphate binding domain VC395_RS07120 SM00116 Domain in cystathionine beta-synthase and other proteins. VC395_RS07135 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS07135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC395_RS07150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS07150 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS07200 SM00091 PAS domain VC395_RS07200 SM00382 ATPases associated with a variety of cellular activities VC395_RS07220 SM01005 Alanine racemase, C-terminal domain VC395_RS07225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS07225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS07235 SM00387 Histidine kinase-like ATPases VC395_RS07240 SM00448 cheY-homologous receiver domain VC395_RS07255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS07255 SM00387 Histidine kinase-like ATPases VC395_RS07255 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS07260 SM00448 cheY-homologous receiver domain VC395_RS07260 SM00862 Transcriptional regulatory protein, C terminal VC395_RS07295 SM00382 ATPases associated with a variety of cellular activities VC395_RS07330 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC395_RS07330 SM00895 VC395_RS07330 VC395_RS07395 SM00448 cheY-homologous receiver domain VC395_RS07395 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC395_RS07400 SM00073 Histidine Phosphotransfer domain VC395_RS07400 SM00091 PAS domain VC395_RS07400 SM00387 Histidine kinase-like ATPases VC395_RS07400 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS07400 SM00448 cheY-homologous receiver domain VC395_RS07415 SM00267 diguanylate cyclase VC395_RS07420 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VC395_RS07440 SM00382 ATPases associated with a variety of cellular activities VC395_RS07455 SM00062 Bacterial periplasmic substrate-binding proteins VC395_RS07480 SM00028 Tetratricopeptide repeats VC395_RS07480 SM00267 diguanylate cyclase VC395_RS07495 SM00267 diguanylate cyclase VC395_RS07505 SM00267 diguanylate cyclase VC395_RS07530 SM00267 diguanylate cyclase VC395_RS07530 SM01079 VC395_RS07530 VC395_RS07535 SM00479 VC395_RS07535 VC395_RS07560 SM00382 ATPases associated with a variety of cellular activities VC395_RS07560 SM00487 DEAD-like helicases superfamily VC395_RS07560 SM00490 helicase superfamily c-terminal domain VC395_RS07560 SM00847 Helicase associated domain (HA2) Add an annotation VC395_RS07605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS07610 SM00448 cheY-homologous receiver domain VC395_RS07620 SM00073 Histidine Phosphotransfer domain VC395_RS07620 SM00260 Two component signalling adaptor domain VC395_RS07620 SM00387 Histidine kinase-like ATPases VC395_RS07620 SM01231 VC395_RS07620 VC395_RS07625 SM00448 cheY-homologous receiver domain VC395_RS07630 SM00138 Methyltransferase, chemotaxis proteins VC395_RS07640 SM00448 cheY-homologous receiver domain VC395_RS07645 SM00260 Two component signalling adaptor domain VC395_RS07650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS07655 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS07655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS07660 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VC395_RS07660 SM00091 PAS domain VC395_RS07660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS07665 SM00487 DEAD-like helicases superfamily VC395_RS07665 SM00490 helicase superfamily c-terminal domain VC395_RS07690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS07690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS07770 SM00382 ATPases associated with a variety of cellular activities VC395_RS07800 SM00100 Cyclic nucleotide-monophosphate binding domain VC395_RS07800 SM00419 helix_turn_helix, cAMP Regulatory protein VC395_RS07850 SM00897 FIST N domain VC395_RS07850 SM01204 VC395_RS07850 VC395_RS07855 SM00387 Histidine kinase-like ATPases VC395_RS07855 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS07855 SM00448 cheY-homologous receiver domain VC395_RS07860 SM00382 ATPases associated with a variety of cellular activities VC395_RS07870 SM00382 ATPases associated with a variety of cellular activities VC395_RS07920 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS07935 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS07950 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS07980 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS08010 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS08065 SM00382 ATPases associated with a variety of cellular activities VC395_RS08075 SM00981 VC395_RS08075 VC395_RS08115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VC395_RS08115 SM00245 tail specific protease VC395_RS08120 SM00945 ProQ/FINO family VC395_RS08130 SM00382 ATPases associated with a variety of cellular activities VC395_RS08150 SM00316 Ribosomal protein S1-like RNA-binding domain VC395_RS08195 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VC395_RS08230 SM00382 ATPases associated with a variety of cellular activities VC395_RS08235 SM00387 Histidine kinase-like ATPases VC395_RS08235 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS08240 SM00382 ATPases associated with a variety of cellular activities VC395_RS08240 SM00448 cheY-homologous receiver domain VC395_RS08255 SM00382 ATPases associated with a variety of cellular activities VC395_RS08265 SM00852 Probable molybdopterin binding domain VC395_RS08295 SM01144 VC395_RS08295 VC395_RS08305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS08390 SM00382 ATPases associated with a variety of cellular activities VC395_RS08395 SM00420 helix_turn_helix, Deoxyribose operon repressor VC395_RS08395 SM01134 VC395_RS08395 VC395_RS08415 SM00354 helix_turn _helix lactose operon repressor VC395_RS08435 SM00849 Metallo-beta-lactamase superfamily VC395_RS08460 SM00382 ATPases associated with a variety of cellular activities VC395_RS08495 SM01022 VC395_RS08495 VC395_RS08535 SM00248 ankyrin repeats VC395_RS08540 SM01060 VC395_RS08540 VC395_RS08565 SM00822 VC395_RS08565 VC395_RS08570 SM00052 Putative diguanylate phosphodiesterase VC395_RS08575 SM00267 diguanylate cyclase VC395_RS08630 SM00260 Two component signalling adaptor domain VC395_RS08630 SM00448 cheY-homologous receiver domain VC395_RS08640 SM00448 cheY-homologous receiver domain VC395_RS08645 SM00387 Histidine kinase-like ATPases VC395_RS08685 SM00028 Tetratricopeptide repeats VC395_RS08685 SM00386 HAT (Half-A-TPR) repeats VC395_RS08700 SM01321 VC395_RS08700 VC395_RS08735 SM00112 Cadherin repeats. VC395_RS08780 SM00382 ATPases associated with a variety of cellular activities VC395_RS08805 SM00363 S4 RNA-binding domain VC395_RS08810 SM00487 DEAD-like helicases superfamily VC395_RS08810 SM00490 helicase superfamily c-terminal domain VC395_RS08820 SM00448 cheY-homologous receiver domain VC395_RS08820 SM00862 Transcriptional regulatory protein, C terminal VC395_RS08825 SM00387 Histidine kinase-like ATPases VC395_RS08835 SM00052 Putative diguanylate phosphodiesterase VC395_RS08850 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS08850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS08875 SM00020 Trypsin-like serine protease VC395_RS08885 SM00448 cheY-homologous receiver domain VC395_RS08890 SM00052 Putative diguanylate phosphodiesterase VC395_RS08890 SM00421 helix_turn_helix, Lux Regulon VC395_RS08890 SM00448 cheY-homologous receiver domain VC395_RS08895 SM00062 Bacterial periplasmic substrate-binding proteins VC395_RS08895 SM00073 Histidine Phosphotransfer domain VC395_RS08895 SM00387 Histidine kinase-like ATPases VC395_RS08895 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS08895 SM00448 cheY-homologous receiver domain VC395_RS08895 SM00918 Ligated ion channel L-glutamate- and glycine-binding site VC395_RS08900 SM00116 Domain in cystathionine beta-synthase and other proteins. VC395_RS08920 SM00382 ATPases associated with a variety of cellular activities VC395_RS08955 SM00382 ATPases associated with a variety of cellular activities VC395_RS08975 SM00155 Phospholipase D. Active site motifs. VC395_RS09020 SM00382 ATPases associated with a variety of cellular activities VC395_RS09040 SM00382 ATPases associated with a variety of cellular activities VC395_RS09045 SM00382 ATPases associated with a variety of cellular activities VC395_RS09060 SM01131 VC395_RS09060 VC395_RS09170 SM00052 Putative diguanylate phosphodiesterase VC395_RS09170 SM00091 PAS domain VC395_RS09175 SM00729 Elongator protein 3, MiaB family, Radical SAM VC395_RS09215 SM00448 cheY-homologous receiver domain VC395_RS09215 SM00862 Transcriptional regulatory protein, C terminal VC395_RS09225 SM00354 helix_turn _helix lactose operon repressor VC395_RS09260 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VC395_RS09260 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VC395_RS09260 SM00493 VC395_RS09260 VC395_RS09290 SM00316 Ribosomal protein S1-like RNA-binding domain VC395_RS09395 SM00487 DEAD-like helicases superfamily VC395_RS09395 SM00490 helicase superfamily c-terminal domain VC395_RS09415 SM00487 DEAD-like helicases superfamily VC395_RS09470 SM01130 VC395_RS09470 VC395_RS09670 SM00382 ATPases associated with a variety of cellular activities VC395_RS09705 SM00342 helix_turn_helix, arabinose operon control protein VC395_RS09725 SM00387 Histidine kinase-like ATPases VC395_RS09725 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS09725 SM00448 cheY-homologous receiver domain VC395_RS09795 SM00382 ATPases associated with a variety of cellular activities VC395_RS09800 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VC395_RS09810 SM00840 VC395_RS09810 VC395_RS09825 SM00052 Putative diguanylate phosphodiesterase VC395_RS09845 SM00491 VC395_RS09845 VC395_RS09865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS09865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS09885 SM00062 Bacterial periplasmic substrate-binding proteins VC395_RS09885 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VC395_RS09890 SM00382 ATPases associated with a variety of cellular activities VC395_RS09910 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS09930 SM00763 PrkA AAA domain VC395_RS09960 SM00382 ATPases associated with a variety of cellular activities VC395_RS09965 SM00849 Metallo-beta-lactamase superfamily VC395_RS09980 SM00382 ATPases associated with a variety of cellular activities VC395_RS09995 SM00487 DEAD-like helicases superfamily VC395_RS09995 SM00490 helicase superfamily c-terminal domain VC395_RS09995 SM00982 VC395_RS09995 VC395_RS09995 SM01058 CarD-like/TRCF domain VC395_RS10050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS10050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS10060 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC395_RS10075 SM00843 VC395_RS10075 VC395_RS10080 SM00344 helix_turn_helix ASNC type VC395_RS10085 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VC395_RS10085 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VC395_RS10110 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VC395_RS10115 SM00028 Tetratricopeptide repeats VC395_RS10125 SM00411 bacterial (prokaryotic) histone like domain VC395_RS10130 SM00316 Ribosomal protein S1-like RNA-binding domain VC395_RS10140 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VC395_RS10150 SM00411 bacterial (prokaryotic) histone like domain VC395_RS10155 SM00382 ATPases associated with a variety of cellular activities VC395_RS10155 SM00464 Found in ATP-dependent protease La (LON) VC395_RS10160 SM00382 ATPases associated with a variety of cellular activities VC395_RS10160 SM00994 ClpX C4-type zinc finger VC395_RS10160 SM01086 C-terminal, D2-small domain, of ClpB protein VC395_RS10180 SM00387 Histidine kinase-like ATPases VC395_RS10180 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS10185 SM00382 ATPases associated with a variety of cellular activities VC395_RS10185 SM00448 cheY-homologous receiver domain VC395_RS10220 SM00052 Putative diguanylate phosphodiesterase VC395_RS10220 SM00267 diguanylate cyclase VC395_RS10235 SM00563 Phosphate acyltransferases VC395_RS10300 SM00495 Chitin-binding domain type 3 VC395_RS10300 SM00636 VC395_RS10300 VC395_RS10350 SM00978 VC395_RS10350 VC395_RS10360 SM00563 Phosphate acyltransferases VC395_RS10370 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS10370 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS10375 SM00530 Helix-turn-helix XRE-family like proteins VC395_RS10390 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VC395_RS10420 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC395_RS10425 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC395_RS10430 SM01144 VC395_RS10430 VC395_RS10445 SM00474 3'-5' exonuclease VC395_RS10475 SM00487 DEAD-like helicases superfamily VC395_RS10475 SM00491 VC395_RS10475 VC395_RS10500 SM00870 VC395_RS10500 VC395_RS10520 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VC395_RS10550 SM00260 Two component signalling adaptor domain VC395_RS10550 SM00448 cheY-homologous receiver domain VC395_RS10615 SM00825 Beta-ketoacyl synthase VC395_RS10625 SM00822 VC395_RS10625 VC395_RS10630 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VC395_RS10660 SM00363 S4 RNA-binding domain VC395_RS10675 SM00316 Ribosomal protein S1-like RNA-binding domain VC395_RS10700 SM00859 Semialdehyde dehydrogenase, NAD binding domain VC395_RS10710 SM00073 Histidine Phosphotransfer domain VC395_RS10745 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VC395_RS10745 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VC395_RS10745 SM00493 VC395_RS10745 VC395_RS10815 SM00382 ATPases associated with a variety of cellular activities VC395_RS10825 SM00260 Two component signalling adaptor domain VC395_RS10830 SM00260 Two component signalling adaptor domain VC395_RS10840 SM00448 cheY-homologous receiver domain VC395_RS10845 SM00073 Histidine Phosphotransfer domain VC395_RS10845 SM00260 Two component signalling adaptor domain VC395_RS10845 SM00387 Histidine kinase-like ATPases VC395_RS10845 SM01231 VC395_RS10845 VC395_RS10855 SM00448 cheY-homologous receiver domain VC395_RS10870 SM00382 ATPases associated with a variety of cellular activities VC395_RS10870 SM00962 SRP54-type protein, GTPase domain VC395_RS10880 SM00855 Phosphoglycerate mutase family VC395_RS10895 SM00836 DALR anticodon binding domain VC395_RS10895 SM01016 Arginyl tRNA synthetase N terminal dom VC395_RS10915 SM00899 VC395_RS10915 VC395_RS10920 SM00342 helix_turn_helix, arabinose operon control protein VC395_RS10930 SM00382 ATPases associated with a variety of cellular activities VC395_RS10940 SM00881 CoA binding domain VC395_RS10955 SM00861 Transketolase, pyrimidine binding domain VC395_RS11045 SM00859 Semialdehyde dehydrogenase, NAD binding domain VC395_RS11055 SM00825 Beta-ketoacyl synthase VC395_RS11100 SM00463 Small MutS-related domain VC395_RS11155 SM00382 ATPases associated with a variety of cellular activities VC395_RS11180 SM00382 ATPases associated with a variety of cellular activities VC395_RS11180 SM00448 cheY-homologous receiver domain VC395_RS11185 SM00091 PAS domain VC395_RS11185 SM00387 Histidine kinase-like ATPases VC395_RS11185 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS11190 SM00382 ATPases associated with a variety of cellular activities VC395_RS11275 SM01130 VC395_RS11275 VC395_RS11290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS11290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS11305 SM00028 Tetratricopeptide repeats VC395_RS11365 SM00937 VC395_RS11365 VC395_RS11385 SM01400 VC395_RS11385 VC395_RS11470 SM01321 VC395_RS11470 VC395_RS11500 SM00047 Lysozyme subfamily 2 VC395_RS11545 SM00138 Methyltransferase, chemotaxis proteins VC395_RS11550 SM00260 Two component signalling adaptor domain VC395_RS11550 SM00448 cheY-homologous receiver domain VC395_RS11555 SM00858 VC395_RS11555 VC395_RS11585 SM00823 Phosphopantetheine attachment site VC395_RS11625 SM01081 Putative carbohydrate binding domain VC395_RS11645 SM00463 Small MutS-related domain VC395_RS11650 SM00363 S4 RNA-binding domain VC395_RS11655 SM00267 diguanylate cyclase VC395_RS11695 SM00479 VC395_RS11695 VC395_RS11710 SM00849 Metallo-beta-lactamase superfamily VC395_RS11715 SM00257 Lysin motif VC395_RS11725 SM00938 Nitrogen regulatory protein P-II VC395_RS11740 SM00977 TilS substrate C-terminal domain VC395_RS11750 SM00481 DNA polymerase alpha chain like domain VC395_RS11780 SM00935 Outer membrane protein (OmpH-like) VC395_RS11790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VC395_RS11835 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC395_RS11890 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VC395_RS11940 SM00267 diguanylate cyclase VC395_RS11980 SM00900 VC395_RS11980 VC395_RS12030 SM00464 Found in ATP-dependent protease La (LON) VC395_RS12065 SM00925 MltA specific insert domain VC395_RS12155 SM00354 helix_turn _helix lactose operon repressor VC395_RS12160 SM01038 Beta galactosidase small chain VC395_RS12180 SM00838 Elongation factor G C-terminus VC395_RS12180 SM00889 Elongation factor G, domain IV VC395_RS12185 SM00382 ATPases associated with a variety of cellular activities VC395_RS12215 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VC395_RS12220 SM01133 VC395_RS12220 VC395_RS12260 SM00986 Uracil DNA glycosylase superfamily VC395_RS12260 SM00987 UreE urease accessory protein, C-terminal domain VC395_RS12265 SM00518 AP endonuclease family 2 VC395_RS12305 SM00448 cheY-homologous receiver domain VC395_RS12305 SM00862 Transcriptional regulatory protein, C terminal VC395_RS12310 SM00073 Histidine Phosphotransfer domain VC395_RS12310 SM00091 PAS domain VC395_RS12310 SM00387 Histidine kinase-like ATPases VC395_RS12310 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS12310 SM00448 cheY-homologous receiver domain VC395_RS12315 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) VC395_RS12315 SM00091 PAS domain VC395_RS12315 SM00267 diguanylate cyclase VC395_RS12320 SM00729 Elongator protein 3, MiaB family, Radical SAM VC395_RS12390 SM00507 HNH nucleases VC395_RS12405 SM00851 MGS-like domain VC395_RS12405 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VC395_RS12410 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VC395_RS12435 SM00957 SecA DEAD-like domain VC395_RS12435 SM00958 SecA preprotein cross-linking domain VC395_RS12450 SM00864 Tubulin/FtsZ family, GTPase domain VC395_RS12450 SM00865 Tubulin/FtsZ family, C-terminal domain VC395_RS12455 SM00842 Cell division protein FtsA VC395_RS12530 SM00345 helix_turn_helix gluconate operon transcriptional repressor VC395_RS12530 SM00895 VC395_RS12530 VC395_RS12560 SM00644 VC395_RS12560 VC395_RS12605 SM00434 DNA Topoisomerase IV VC395_RS12610 SM00387 Histidine kinase-like ATPases VC395_RS12610 SM00433 TopoisomeraseII VC395_RS12650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VC395_RS12650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS12655 SM00880 VC395_RS12655 VC395_RS12655 SM01118 VC395_RS12655 VC395_RS12670 SM00287 Bacterial SH3 domain homologues VC395_RS12680 SM00382 ATPases associated with a variety of cellular activities VC395_RS12690 SM01192 VC395_RS12690 VC395_RS12690 SM01193 VC395_RS12690 VC395_RS12705 SM00954 Region found in RelA / SpoT proteins VC395_RS12715 SM00073 Histidine Phosphotransfer domain VC395_RS12715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS12715 SM00387 Histidine kinase-like ATPases VC395_RS12715 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS12715 SM00448 cheY-homologous receiver domain VC395_RS12720 SM00267 diguanylate cyclase VC395_RS12755 SM00358 Double-stranded RNA binding motif VC395_RS12755 SM00535 Ribonuclease III family VC395_RS12880 SM00014 Acid phosphatase homologues VC395_RS12890 SM00917 LeuA allosteric (dimerisation) domain VC395_RS12895 SM01329 VC395_RS12895 VC395_RS12950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC395_RS13000 SM00487 DEAD-like helicases superfamily VC395_RS13000 SM00490 helicase superfamily c-terminal domain VC395_RS13010 SM00670 Large family of predicted nucleotide-binding domains VC395_RS13035 SM00563 Phosphate acyltransferases VC395_RS13070 SM00382 ATPases associated with a variety of cellular activities VC395_RS13085 SM00116 Domain in cystathionine beta-synthase and other proteins. VC395_RS13105 SM00382 ATPases associated with a variety of cellular activities VC395_RS13135 SM00924 MgtE intracellular N domain VC395_RS13150 SM00382 ATPases associated with a variety of cellular activities VC395_RS13225 SM00382 ATPases associated with a variety of cellular activities VC395_RS13275 SM00487 DEAD-like helicases superfamily VC395_RS13275 SM00490 helicase superfamily c-terminal domain VC395_RS13300 SM01321 VC395_RS13300 VC395_RS13315 SM00662 RNA polymerases D VC395_RS13320 SM00363 S4 RNA-binding domain VC395_RS13320 SM01390 VC395_RS13320 VC395_RS13385 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VC395_RS13390 SM01374 VC395_RS13390 VC395_RS13410 SM00322 K homology RNA-binding domain VC395_RS13425 SM01382 VC395_RS13425 VC395_RS13425 SM01383 VC395_RS13425 VC395_RS13445 SM01403 VC395_RS13445 VC395_RS13450 SM00967 RNA 2'-O ribose methyltransferase substrate binding VC395_RS13455 SM00316 Ribosomal protein S1-like RNA-binding domain VC395_RS13455 SM00357 Cold shock protein domain VC395_RS13455 SM00955 VC395_RS13455 VC395_RS13465 SM00671 Sel1-like repeats. VC395_RS13470 SM00788 Adenylosuccinate synthetase VC395_RS13500 SM00382 ATPases associated with a variety of cellular activities VC395_RS13525 SM00100 Cyclic nucleotide-monophosphate binding domain VC395_RS13525 SM00419 helix_turn_helix, cAMP Regulatory protein VC395_RS13530 SM01150 VC395_RS13530 VC395_RS13555 SM00729 Elongator protein 3, MiaB family, Radical SAM VC395_RS13605 SM00965 Secretin and TonB N terminus short domain VC395_RS13670 SM00859 Semialdehyde dehydrogenase, NAD binding domain VC395_RS13690 SM00971 Serine acetyltransferase, N-terminal VC395_RS13705 SM00450 Rhodanese Homology Domain VC395_RS13735 SM00841 Elongation factor P, C-terminal VC395_RS13735 SM01185 VC395_RS13735 VC395_RS13755 SM00883 Chaperonin 10 Kd subunit VC395_RS13800 SM00382 ATPases associated with a variety of cellular activities VC395_RS13800 SM01086 C-terminal, D2-small domain, of ClpB protein VC395_RS13815 SM00354 helix_turn _helix lactose operon repressor VC395_RS13820 SM00487 DEAD-like helicases superfamily VC395_RS13820 SM00490 helicase superfamily c-terminal domain VC395_RS13830 SM00919 Malic enzyme, NAD binding domain VC395_RS13830 SM01274 VC395_RS13830 VC395_RS13880 SM00448 cheY-homologous receiver domain VC395_RS13880 SM00862 Transcriptional regulatory protein, C terminal VC395_RS13885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS13885 SM00387 Histidine kinase-like ATPases VC395_RS13885 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS13905 SM00267 diguanylate cyclase VC395_RS13935 SM00421 helix_turn_helix, Lux Regulon VC395_RS13935 SM00448 cheY-homologous receiver domain VC395_RS13940 SM01091 Transporter associated domain VC395_RS13960 SM00072 Guanylate kinase homologues. VC395_RS13965 SM01409 VC395_RS13965 VC395_RS13970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VC395_RS13970 SM00954 Region found in RelA / SpoT proteins VC395_RS13975 SM00487 DEAD-like helicases superfamily VC395_RS13975 SM00490 helicase superfamily c-terminal domain VC395_RS13985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VC395_RS13985 SM00387 Histidine kinase-like ATPases VC395_RS13985 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS13990 SM00448 cheY-homologous receiver domain VC395_RS13990 SM00862 Transcriptional regulatory protein, C terminal VC395_RS14000 SM00316 Ribosomal protein S1-like RNA-binding domain VC395_RS14000 SM00732 Likely ribonuclease with RNase H fold. VC395_RS14080 SM00382 ATPases associated with a variety of cellular activities VC395_RS14095 SM00363 S4 RNA-binding domain VC395_RS14145 SM01230 VC395_RS14145 VC395_RS14155 SM00091 PAS domain VC395_RS14155 SM00387 Histidine kinase-like ATPases VC395_RS14155 SM00388 His Kinase A (phosphoacceptor) domain VC395_RS14160 SM00382 ATPases associated with a variety of cellular activities VC395_RS14160 SM00448 cheY-homologous receiver domain VC395_RS14165 SM00052 Putative diguanylate phosphodiesterase VC395_RS14165 SM00267 diguanylate cyclase VC395_RS17430 SM00962 SRP54-type protein, GTPase domain VC395_RS17760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain