locus-tag class description HPY04_RS00005 PF00308 Bacterial dnaA protein HPY04_RS00005 PF11638 DnaA N-terminal domain HPY04_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HPY04_RS00010 PF02767 DNA polymerase III beta subunit, central domain HPY04_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HPY04_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HPY04_RS00015 PF02463 RecF/RecN/SMC N terminal domain HPY04_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus HPY04_RS00020 PF18053 DNA gyrase B subunit insert domain HPY04_RS00020 PF00204 DNA gyrase B HPY04_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS00020 PF01751 Toprim domain HPY04_RS00045 PF00665 Integrase core domain HPY04_RS00045 PF09299 Mu transposase, C-terminal HPY04_RS00075 PF00011 Hsp20/alpha crystallin family HPY04_RS00080 PF00155 Aminotransferase class I and II HPY04_RS00085 PF05746 DALR anticodon binding domain HPY04_RS00085 PF02092 Glycyl-tRNA synthetase beta subunit HPY04_RS00090 PF02091 Glycyl-tRNA synthetase alpha subunit HPY04_RS00095 PF01169 Uncharacterized protein family UPF0016 HPY04_RS00105 PF01206 Sulfurtransferase TusA HPY04_RS00115 PF08240 Alcohol dehydrogenase GroES-like domain HPY04_RS00115 PF00107 Zinc-binding dehydrogenase HPY04_RS00120 PF00585 C-terminal regulatory domain of Threonine dehydratase HPY04_RS00120 PF00291 Pyridoxal-phosphate dependent enzyme HPY04_RS00125 PF00920 Dehydratase family HPY04_RS00130 PF01063 Amino-transferase class IV HPY04_RS00140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY04_RS00140 PF00205 Thiamine pyrophosphate enzyme, central domain HPY04_RS00140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY04_RS00145 PF13335 Magnesium chelatase, subunit ChlI C-terminal HPY04_RS00145 PF01078 Magnesium chelatase, subunit ChlI HPY04_RS00150 PF01553 Acyltransferase HPY04_RS00155 PF01323 DSBA-like thioredoxin domain HPY04_RS00160 PF01636 Phosphotransferase enzyme family HPY04_RS00165 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HPY04_RS00165 PF12801 4Fe-4S binding domain HPY04_RS00165 PF13746 4Fe-4S dicluster domain HPY04_RS00170 PF06288 Protein of unknown function (DUF1040) HPY04_RS00180 PF07070 SpoOM protein HPY04_RS00185 PF03006 Haemolysin-III related HPY04_RS00195 PF02386 Cation transport protein HPY04_RS00200 PF02254 TrkA-N domain HPY04_RS00200 PF02080 TrkA-C domain HPY04_RS00205 PF01189 16S rRNA methyltransferase RsmB/F HPY04_RS00205 PF01029 NusB family HPY04_RS00210 PF02911 Formyl transferase, C-terminal domain HPY04_RS00210 PF00551 Formyl transferase HPY04_RS00215 PF01327 Polypeptide deformylase HPY04_RS00220 PF01476 LysM domain HPY04_RS00225 PF02481 DNA recombination-mediator protein A HPY04_RS00225 PF17782 DprA winged helix domain HPY04_RS00230 PF04361 Protein of unknown function (DUF494) HPY04_RS00235 PF01396 Topoisomerase DNA binding C4 zinc finger HPY04_RS00240 PF02222 ATP-grasp domain HPY04_RS00240 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HPY04_RS00245 PF00731 AIR carboxylase HPY04_RS00250 PF01300 Telomere recombination HPY04_RS00255 PF01218 Coproporphyrinogen III oxidase HPY04_RS00260 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HPY04_RS00260 PF01488 Shikimate / quinate 5-dehydrogenase HPY04_RS00260 PF08501 Shikimate dehydrogenase substrate binding domain HPY04_RS00270 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS00310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HPY04_RS00315 PF13667 ThiC-associated domain HPY04_RS00315 PF01964 Radical SAM ThiC family HPY04_RS00320 PF02581 Thiamine monophosphate synthase HPY04_RS00325 PF00899 ThiF family HPY04_RS00330 PF02597 ThiS family HPY04_RS00335 PF05690 Thiazole biosynthesis protein ThiG HPY04_RS00340 PF06968 Biotin and Thiamin Synthesis associated domain HPY04_RS00340 PF04055 Radical SAM superfamily HPY04_RS00345 PF01321 Creatinase/Prolidase N-terminal domain HPY04_RS00345 PF00557 Metallopeptidase family M24 HPY04_RS00345 PF01321 Creatinase/Prolidase N-terminal domain HPY04_RS00345 PF00557 Metallopeptidase family M24 HPY04_RS00350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS00350 PF03466 LysR substrate binding domain HPY04_RS00355 PF07690 Major Facilitator Superfamily HPY04_RS00365 PF01037 Lrp/AsnC ligand binding domain HPY04_RS00370 PF08448 PAS fold HPY04_RS00370 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS00370 PF00563 EAL domain HPY04_RS00375 PF04445 Putative SAM-dependent methyltransferase HPY04_RS00385 PF00892 EamA-like transporter family HPY04_RS00390 PF00582 Universal stress protein family HPY04_RS00395 PF00210 Ferritin-like domain HPY04_RS00400 PF10625 Universal stress protein B (UspB) HPY04_RS00415 PF02646 RmuC family HPY04_RS00420 PF01209 ubiE/COQ5 methyltransferase family HPY04_RS00425 PF02036 SCP-2 sterol transfer family HPY04_RS00430 PF03109 ABC1 family HPY04_RS00435 PF02416 mttA/Hcf106 family HPY04_RS00440 PF02416 mttA/Hcf106 family HPY04_RS00445 PF00902 Sec-independent protein translocase protein (TatC) HPY04_RS00450 PF03150 Di-haem cytochrome c peroxidase HPY04_RS00450 PF00034 Cytochrome c HPY04_RS00455 PF01554 MatE HPY04_RS00465 PF01726 LexA DNA binding domain HPY04_RS00465 PF00717 Peptidase S24-like HPY04_RS00470 PF01553 Acyltransferase HPY04_RS00475 PF01040 UbiA prenyltransferase family HPY04_RS00480 PF04345 Chorismate lyase HPY04_RS00485 PF03748 Flagellar basal body-associated protein FliL HPY04_RS00490 PF00672 HAMP domain HPY04_RS00490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS00490 PF02203 Tar ligand binding domain homologue HPY04_RS00495 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HPY04_RS00495 PF01694 Rhomboid family HPY04_RS00500 PF00581 Rhodanese-like domain HPY04_RS00505 PF01026 TatD related DNase HPY04_RS00510 PF00490 Delta-aminolevulinic acid dehydratase HPY04_RS00520 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY04_RS00520 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY04_RS00520 PF00476 DNA polymerase family A HPY04_RS00520 PF01612 3'-5' exonuclease HPY04_RS00525 PF01926 50S ribosome-binding GTPase HPY04_RS00530 PF00034 Cytochrome c HPY04_RS00540 PF04220 Der GTPase activator (YihI) HPY04_RS00545 PF10675 Protein of unknown function (DUF2489) HPY04_RS00550 PF06969 HemN C-terminal domain HPY04_RS00550 PF04055 Radical SAM superfamily HPY04_RS00555 PF07219 HemY protein N-terminus HPY04_RS00560 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HPY04_RS00565 PF02602 Uroporphyrinogen-III synthase HemD HPY04_RS00570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HPY04_RS00570 PF03900 Porphobilinogen deaminase, C-terminal domain HPY04_RS00575 PF01295 Adenylate cyclase, class-I HPY04_RS00575 PF12633 Adenylate cyclase NT domain HPY04_RS00580 PF01491 Frataxin-like domain HPY04_RS00590 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPY04_RS00590 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY04_RS00595 PF01678 Diaminopimelate epimerase HPY04_RS00600 PF04340 Protein of unknown function, DUF484 HPY04_RS00605 PF00589 Phage integrase family HPY04_RS00605 PF02899 Phage integrase, N-terminal SAM-like domain HPY04_RS00610 PF13419 Haloacid dehalogenase-like hydrolase HPY04_RS00615 PF08495 FIST N domain HPY04_RS00615 PF10442 FIST C domain HPY04_RS00615 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS00615 PF00563 EAL domain HPY04_RS00635 PF12146 Serine aminopeptidase, S33 HPY04_RS00640 PF01810 LysE type translocator HPY04_RS00645 PF08668 HDOD domain HPY04_RS00645 PF00563 EAL domain HPY04_RS00650 PF00210 Ferritin-like domain HPY04_RS00685 PF00448 SRP54-type protein, GTPase domain HPY04_RS00685 PF02881 SRP54-type protein, helical bundle domain HPY04_RS00690 PF00005 ABC transporter HPY04_RS00695 PF18075 FtsX extracellular domain HPY04_RS00700 PF00140 Sigma-70 factor, region 1.2 HPY04_RS00700 PF04545 Sigma-70, region 4 HPY04_RS00700 PF04542 Sigma-70 region 2 HPY04_RS00705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY04_RS00705 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS00710 PF00440 Bacterial regulatory proteins, tetR family HPY04_RS00720 PF05958 tRNA (Uracil-5-)-methyltransferase HPY04_RS00725 PF00593 TonB dependent receptor HPY04_RS00725 PF07715 TonB-dependent Receptor Plug Domain HPY04_RS00730 PF05922 Peptidase inhibitor I9 HPY04_RS00730 PF00082 Subtilase family HPY04_RS00730 PF04151 Bacterial pre-peptidase C-terminal domain HPY04_RS00735 PF01177 Asp/Glu/Hydantoin racemase HPY04_RS00805 PF00962 Adenosine/AMP deaminase HPY04_RS00810 PF00563 EAL domain HPY04_RS00810 PF13188 PAS domain HPY04_RS00810 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS00810 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS00815 PF00158 Sigma-54 interaction domain HPY04_RS00815 PF02954 Bacterial regulatory protein, Fis family HPY04_RS00815 PF00072 Response regulator receiver domain HPY04_RS00820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS00820 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS00820 PF00989 PAS fold HPY04_RS00830 PF00120 Glutamine synthetase, catalytic domain HPY04_RS00830 PF03951 Glutamine synthetase, beta-Grasp domain HPY04_RS00850 PF03631 Virulence factor BrkB HPY04_RS00855 PF02580 D-Tyr-tRNA(Tyr) deacylase HPY04_RS00860 PF09500 Putative thioesterase (yiiD_Cterm) HPY04_RS00860 PF00583 Acetyltransferase (GNAT) family HPY04_RS00870 PF01293 Phosphoenolpyruvate carboxykinase HPY04_RS00875 PF01430 Hsp33 protein HPY04_RS00880 PF01479 S4 domain HPY04_RS00885 PF11356 Type II secretion system protein C HPY04_RS00890 PF03958 Bacterial type II/III secretion system short domain HPY04_RS00890 PF00263 Bacterial type II and III secretion system protein HPY04_RS00895 PF00437 Type II/IV secretion system protein HPY04_RS00900 PF00482 Type II secretion system (T2SS), protein F HPY04_RS00905 PF08334 Type II secretion system (T2SS), protein G HPY04_RS00905 PF07963 Prokaryotic N-terminal methylation motif HPY04_RS00910 PF12019 Type II transport protein GspH HPY04_RS00915 PF07963 Prokaryotic N-terminal methylation motif HPY04_RS00915 PF02501 Type II secretion system (T2SS), protein I HPY04_RS00920 PF07963 Prokaryotic N-terminal methylation motif HPY04_RS00920 PF11612 Type II secretion system (T2SS), protein J HPY04_RS00925 PF03934 Type II secretion system (T2SS), protein K HPY04_RS00930 PF05134 Type II secretion system (T2SS), protein L HPY04_RS00930 PF12693 GspL periplasmic domain HPY04_RS00935 PF04612 Type II secretion system (T2SS), protein M HPY04_RS00940 PF01203 Type II secretion system (T2SS), protein N HPY04_RS00945 PF00459 Inositol monophosphatase family HPY04_RS00950 PF00293 NUDIX domain HPY04_RS00955 PF01521 Iron-sulphur cluster biosynthesis HPY04_RS00955 PF01106 NifU-like domain HPY04_RS00960 PF00156 Phosphoribosyl transferase domain HPY04_RS00970 PF00561 alpha/beta hydrolase fold HPY04_RS00980 PF16921 Tex protein YqgF-like domain HPY04_RS00980 PF17674 HHH domain HPY04_RS00980 PF00575 S1 RNA binding domain HPY04_RS00980 PF09371 Tex-like protein N-terminal domain HPY04_RS00985 PF03449 Transcription elongation factor, N-terminal HPY04_RS00985 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY04_RS00990 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS00990 PF17152 Periplasmic sensor domain HPY04_RS00995 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS00995 PF00072 Response regulator receiver domain HPY04_RS01000 PF00672 HAMP domain HPY04_RS01000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS01000 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS01005 PF00860 Permease family HPY04_RS01010 PF17191 RecG wedge domain HPY04_RS01010 PF00271 Helicase conserved C-terminal domain HPY04_RS01010 PF00270 DEAD/DEAH box helicase HPY04_RS01015 PF13291 ACT domain HPY04_RS01015 PF04607 Region found in RelA / SpoT proteins HPY04_RS01015 PF02824 TGS domain HPY04_RS01020 PF01192 RNA polymerase Rpb6 HPY04_RS01025 PF00625 Guanylate kinase HPY04_RS01030 PF02592 Putative vitamin uptake transporter HPY04_RS01035 PF00474 Sodium:solute symporter family HPY04_RS01045 PF02080 TrkA-C domain HPY04_RS01045 PF00999 Sodium/hydrogen exchanger family HPY04_RS01045 PF03471 Transporter associated domain HPY04_RS01050 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS01050 PF00072 Response regulator receiver domain HPY04_RS01055 PF02683 Cytochrome C biogenesis protein transmembrane region HPY04_RS01055 PF11412 Disulphide bond corrector protein DsbC HPY04_RS01060 PF03714 Bacterial pullanase-associated domain HPY04_RS01060 PF17967 Pullulanase N2 domain HPY04_RS01060 PF18494 Pullulanase Ins domain HPY04_RS01060 PF11852 Domain of unknown function (DUF3372) HPY04_RS01060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY04_RS01065 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY04_RS01070 PF00206 Lyase HPY04_RS01070 PF10415 Fumarase C C-terminus HPY04_RS01075 PF17158 Membrane-associated sensor, integral membrane domain HPY04_RS01075 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS01080 PF04186 FxsA cytoplasmic membrane protein HPY04_RS01085 PF00588 SpoU rRNA Methylase family HPY04_RS01090 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY04_RS01090 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY04_RS01095 PF16527 Two-component sensor protein CpxA, periplasmic domain HPY04_RS01095 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS01095 PF00672 HAMP domain HPY04_RS01095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS01100 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS01100 PF00072 Response regulator receiver domain HPY04_RS01110 PF01545 Cation efflux family HPY04_RS01110 PF16916 Dimerisation domain of Zinc Transporter HPY04_RS01115 PF00365 Phosphofructokinase HPY04_RS01120 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HPY04_RS01125 PF06005 Cell division protein ZapB HPY04_RS01130 PF02219 Methylenetetrahydrofolate reductase HPY04_RS01135 PF00696 Amino acid kinase family HPY04_RS01135 PF03447 Homoserine dehydrogenase, NAD binding domain HPY04_RS01135 PF00742 Homoserine dehydrogenase HPY04_RS01140 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY04_RS01145 PF01340 Met Apo-repressor, MetJ HPY04_RS01150 PF03949 Malic enzyme, NAD binding domain HPY04_RS01150 PF00390 Malic enzyme, N-terminal domain HPY04_RS01155 PF01197 Ribosomal protein L31 HPY04_RS01160 PF00270 DEAD/DEAH box helicase HPY04_RS01160 PF17764 3′ DNA-binding domain (3′BD) HPY04_RS01160 PF00271 Helicase conserved C-terminal domain HPY04_RS01160 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HPY04_RS01160 PF18074 Primosomal protein N C-terminal domain HPY04_RS01165 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS01170 PF05036 Sporulation related domain HPY04_RS01175 PF00227 Proteasome subunit HPY04_RS01180 PF07724 AAA domain (Cdc48 subfamily) HPY04_RS01180 PF10431 C-terminal, D2-small domain, of ClpB protein HPY04_RS01180 PF00004 ATPase family associated with various cellular activities (AAA) HPY04_RS01185 PF01040 UbiA prenyltransferase family HPY04_RS01190 PF03737 Aldolase/RraA HPY04_RS01195 PF01554 MatE HPY04_RS01200 PF00121 Triosephosphate isomerase HPY04_RS01220 PF08220 DeoR-like helix-turn-helix domain HPY04_RS01220 PF00455 DeoR C terminal sensor domain HPY04_RS01225 PF00166 Chaperonin 10 Kd subunit HPY04_RS01230 PF00118 TCP-1/cpn60 chaperonin family HPY04_RS01235 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HPY04_RS01250 PF04055 Radical SAM superfamily HPY04_RS01255 PF01132 Elongation factor P (EF-P) OB domain HPY04_RS01255 PF08207 Elongation factor P (EF-P) KOW-like domain HPY04_RS01255 PF09285 Elongation factor P, C-terminal HPY04_RS01260 PF02313 Fumarate reductase subunit D HPY04_RS01265 PF02300 Fumarate reductase subunit C HPY04_RS01270 PF13183 4Fe-4S dicluster domain HPY04_RS01270 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY04_RS01275 PF02910 Fumarate reductase flavoprotein C-term HPY04_RS01275 PF00890 FAD binding domain HPY04_RS01280 PF00152 tRNA synthetases class II (D, K and N) HPY04_RS01285 PF00581 Rhodanese-like domain HPY04_RS01290 PF02556 Preprotein translocase subunit SecB HPY04_RS01295 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HPY04_RS01295 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HPY04_RS01300 PF06426 Serine acetyltransferase, N-terminal HPY04_RS01300 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS01310 PF00311 Phosphoenolpyruvate carboxylase HPY04_RS01315 PF07687 Peptidase dimerisation domain HPY04_RS01315 PF01546 Peptidase family M20/M25/M40 HPY04_RS01320 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY04_RS01320 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY04_RS01325 PF00696 Amino acid kinase family HPY04_RS01330 PF00764 Arginosuccinate synthase HPY04_RS01335 PF00206 Lyase HPY04_RS01335 PF14698 Argininosuccinate lyase C-terminal HPY04_RS01345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY04_RS01345 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS01350 PF08534 Redoxin HPY04_RS01350 PF00462 Glutaredoxin HPY04_RS01355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS01355 PF03466 LysR substrate binding domain HPY04_RS01360 PF00912 Transglycosylase HPY04_RS01360 PF00905 Penicillin binding protein transpeptidase domain HPY04_RS01360 PF17092 Penicillin-binding protein OB-like domain HPY04_RS01385 PF07660 Secretin and TonB N terminus short domain HPY04_RS01385 PF03958 Bacterial type II/III secretion system short domain HPY04_RS01385 PF00263 Bacterial type II and III secretion system protein HPY04_RS01385 PF11741 AMIN domain HPY04_RS01390 PF01202 Shikimate kinase HPY04_RS01395 PF01761 3-dehydroquinate synthase HPY04_RS01405 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPY04_RS01410 PF00834 Ribulose-phosphate 3 epimerase family HPY04_RS01415 PF13419 Haloacid dehalogenase-like hydrolase HPY04_RS01420 PF00579 tRNA synthetases class I (W and Y) HPY04_RS01435 PF00919 Uncharacterized protein family UPF0004 HPY04_RS01435 PF04055 Radical SAM superfamily HPY04_RS01435 PF18693 TRAM domain HPY04_RS01440 PF00117 Glutamine amidotransferase class-I HPY04_RS01445 PF00202 Aminotransferase class-III HPY04_RS01450 PF04958 Arginine N-succinyltransferase beta subunit HPY04_RS01455 PF00171 Aldehyde dehydrogenase family HPY04_RS01465 PF13545 Crp-like helix-turn-helix domain HPY04_RS01465 PF00027 Cyclic nucleotide-binding domain HPY04_RS01470 PF00485 Phosphoribulokinase / Uridine kinase family HPY04_RS01475 PF06794 Uncharacterised protein family (UPF0270) HPY04_RS01480 PF00561 alpha/beta hydrolase fold HPY04_RS01490 PF12848 ABC transporter HPY04_RS01490 PF00005 ABC transporter HPY04_RS01495 PF02525 Flavodoxin-like fold HPY04_RS01500 PF02254 TrkA-N domain HPY04_RS01500 PF00999 Sodium/hydrogen exchanger family HPY04_RS01510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY04_RS01515 PF01112 Asparaginase HPY04_RS01520 PF00709 Adenylosuccinate synthetase HPY04_RS01525 PF08238 Sel1 repeat HPY04_RS01530 PF00884 Sulfatase HPY04_RS01530 PF11893 Domain of unknown function (DUF3413) HPY04_RS01535 PF00773 RNB domain HPY04_RS01535 PF17876 Cold shock domain HPY04_RS01535 PF00575 S1 RNA binding domain HPY04_RS01535 PF08461 Ribonuclease R winged-helix domain HPY04_RS01535 PF08206 Ribonuclease B OB domain HPY04_RS01540 PF00588 SpoU rRNA Methylase family HPY04_RS01540 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY04_RS01545 PF00338 Ribosomal protein S10p/S20e HPY04_RS01550 PF00297 Ribosomal protein L3 HPY04_RS01555 PF00573 Ribosomal protein L4/L1 family HPY04_RS01560 PF00276 Ribosomal protein L23 HPY04_RS01565 PF03947 Ribosomal Proteins L2, C-terminal domain HPY04_RS01565 PF00181 Ribosomal Proteins L2, RNA binding domain HPY04_RS01570 PF00203 Ribosomal protein S19 HPY04_RS01575 PF00237 Ribosomal protein L22p/L17e HPY04_RS01580 PF07650 KH domain HPY04_RS01580 PF00189 Ribosomal protein S3, C-terminal domain HPY04_RS01585 PF00252 Ribosomal protein L16p/L10e HPY04_RS01590 PF00831 Ribosomal L29 protein HPY04_RS01595 PF00366 Ribosomal protein S17 HPY04_RS01600 PF00238 Ribosomal protein L14p/L23e HPY04_RS01605 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HPY04_RS01605 PF00467 KOW motif HPY04_RS01610 PF00673 ribosomal L5P family C-terminus HPY04_RS01610 PF00281 Ribosomal protein L5 HPY04_RS01615 PF00253 Ribosomal protein S14p/S29e HPY04_RS01620 PF00410 Ribosomal protein S8 HPY04_RS01625 PF00347 Ribosomal protein L6 HPY04_RS01630 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HPY04_RS01635 PF03719 Ribosomal protein S5, C-terminal domain HPY04_RS01635 PF00333 Ribosomal protein S5, N-terminal domain HPY04_RS01640 PF00327 Ribosomal protein L30p/L7e HPY04_RS01645 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HPY04_RS01650 PF00344 SecY translocase HPY04_RS01655 PF00444 Ribosomal protein L36 HPY04_RS01660 PF00416 Ribosomal protein S13/S18 HPY04_RS01665 PF00411 Ribosomal protein S11 HPY04_RS01670 PF01479 S4 domain HPY04_RS01670 PF00163 Ribosomal protein S4/S9 N-terminal domain HPY04_RS01675 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HPY04_RS01675 PF01000 RNA polymerase Rpb3/RpoA insert domain HPY04_RS01675 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HPY04_RS01680 PF01196 Ribosomal protein L17 HPY04_RS01690 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY04_RS01690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY04_RS01695 PF08525 Opacity-associated protein A N-terminal motif HPY04_RS01695 PF04225 Opacity-associated protein A LysM-like domain HPY04_RS01700 PF00892 EamA-like transporter family HPY04_RS01705 PF13673 Acetyltransferase (GNAT) domain HPY04_RS01710 PF03880 DbpA RNA binding domain HPY04_RS01710 PF00270 DEAD/DEAH box helicase HPY04_RS01710 PF00271 Helicase conserved C-terminal domain HPY04_RS01720 PF02872 5'-nucleotidase, C-terminal domain HPY04_RS01720 PF00149 Calcineurin-like phosphoesterase HPY04_RS01725 PF14824 Sirohaem biosynthesis protein central HPY04_RS01725 PF10414 Sirohaem synthase dimerisation region HPY04_RS01725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY04_RS01730 PF01507 Phosphoadenosine phosphosulfate reductase family HPY04_RS01735 PF00009 Elongation factor Tu GTP binding domain HPY04_RS01760 PF00005 ABC transporter HPY04_RS01770 PF10795 Protein of unknown function (DUF2607) HPY04_RS01775 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HPY04_RS01780 PF01625 Peptide methionine sulfoxide reductase HPY04_RS01785 PF17243 POTRA domain TamA domain 1 HPY04_RS01785 PF01103 Surface antigen HPY04_RS01785 PF07244 Surface antigen variable number repeat HPY04_RS01790 PF04357 TamB, inner membrane protein subunit of TAM complex HPY04_RS01795 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HPY04_RS01800 PF00719 Inorganic pyrophosphatase HPY04_RS01805 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HPY04_RS01810 PF08245 Mur ligase middle domain HPY04_RS01810 PF01225 Mur ligase family, catalytic domain HPY04_RS01810 PF02875 Mur ligase family, glutamate ligase domain HPY04_RS01815 PF02441 Flavoprotein HPY04_RS01825 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS01830 PF00005 ABC transporter HPY04_RS01835 PF04751 Protein of unknown function (DUF615) HPY04_RS01840 PF01523 Putative modulator of DNA gyrase HPY04_RS01845 PF03448 MgtE intracellular N domain HPY04_RS01845 PF01769 Divalent cation transporter HPY04_RS01845 PF00571 CBS domain HPY04_RS01850 PF00381 PTS HPr component phosphorylation site HPY04_RS01855 PF03668 P-loop ATPase protein family HPY04_RS01860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY04_RS01865 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY04_RS01870 PF00309 Sigma-54 factor, Activator interacting domain (AID) HPY04_RS01870 PF04552 Sigma-54, DNA binding domain HPY04_RS01870 PF04963 Sigma-54 factor, core binding domain HPY04_RS01875 PF00005 ABC transporter HPY04_RS01875 PF12399 Branched-chain amino acid ATP-binding cassette transporter HPY04_RS01880 PF03968 OstA-like protein HPY04_RS01895 PF00571 CBS domain HPY04_RS01895 PF01380 SIS domain HPY04_RS01900 PF01699 Sodium/calcium exchanger protein HPY04_RS01905 PF00005 ABC transporter HPY04_RS01910 PF02405 Permease MlaE HPY04_RS01915 PF02470 MlaD protein HPY04_RS01920 PF05494 MlaC protein HPY04_RS01930 PF01722 BolA-like protein HPY04_RS01935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY04_RS01940 PF01553 Acyltransferase HPY04_RS01945 PF01042 Endoribonuclease L-PSP HPY04_RS01950 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HPY04_RS01950 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HPY04_RS01955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY04_RS01955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY04_RS01960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY04_RS01960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY04_RS01965 PF13638 PIN domain HPY04_RS01965 PF02562 PhoH-like protein HPY04_RS01970 PF18337 RapA N-terminal Tudor like domain HPY04_RS01970 PF18339 RapA N-terminal Tudor like domain 1 HPY04_RS01970 PF00176 SNF2 family N-terminal domain HPY04_RS01970 PF12137 RNA polymerase recycling family C-terminal HPY04_RS01970 PF00271 Helicase conserved C-terminal domain HPY04_RS01975 PF00849 RNA pseudouridylate synthase HPY04_RS01980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY04_RS01980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY04_RS01985 PF08264 Anticodon-binding domain of tRNA HPY04_RS01985 PF10458 Valyl tRNA synthetase tRNA binding arm HPY04_RS01985 PF00133 tRNA synthetases class I (I, L, M and V) HPY04_RS01990 PF04364 DNA polymerase III chi subunit, HolC HPY04_RS01995 PF02789 Cytosol aminopeptidase family, N-terminal domain HPY04_RS01995 PF00883 Cytosol aminopeptidase family, catalytic domain HPY04_RS02000 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY04_RS02005 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY04_RS02020 PF00072 Response regulator receiver domain HPY04_RS02065 PF00694 Aconitase C-terminal domain HPY04_RS02070 PF00330 Aconitase family (aconitate hydratase) HPY04_RS02075 PF00180 Isocitrate/isopropylmalate dehydrogenase HPY04_RS02080 PF00682 HMGL-like HPY04_RS02080 PF08502 LeuA allosteric (dimerisation) domain HPY04_RS02085 PF01569 PAP2 superfamily HPY04_RS02095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS02095 PF03466 LysR substrate binding domain HPY04_RS02100 PF00501 AMP-binding enzyme HPY04_RS02105 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY04_RS02105 PF00205 Thiamine pyrophosphate enzyme, central domain HPY04_RS02105 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY04_RS02110 PF10369 Small subunit of acetolactate synthase HPY04_RS02115 PF01842 ACT domain HPY04_RS02115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY04_RS02115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY04_RS02120 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HPY04_RS02125 PF01812 5-formyltetrahydrofolate cyclo-ligase family HPY04_RS02135 PF05164 Cell division protein ZapA HPY04_RS02140 PF03695 Uncharacterised protein family (UPF0149) HPY04_RS02145 PF01494 FAD binding domain HPY04_RS02150 PF01494 FAD binding domain HPY04_RS02165 PF03937 Flavinator of succinate dehydrogenase HPY04_RS02175 PF02910 Fumarate reductase flavoprotein C-term HPY04_RS02175 PF00890 FAD binding domain HPY04_RS02180 PF08281 Sigma-70, region 4 HPY04_RS02180 PF04542 Sigma-70 region 2 HPY04_RS02185 PF03873 Anti sigma-E protein RseA, C-terminal domain HPY04_RS02185 PF03872 Anti sigma-E protein RseA, N-terminal domain HPY04_RS02190 PF17188 MucB/RseB C-terminal domain HPY04_RS02190 PF03888 MucB/RseB N-terminal domain HPY04_RS02200 PF00679 Elongation factor G C-terminus HPY04_RS02200 PF06421 GTP-binding protein LepA C-terminus HPY04_RS02200 PF03144 Elongation factor Tu domain 2 HPY04_RS02200 PF00009 Elongation factor Tu GTP binding domain HPY04_RS02205 PF10502 Signal peptidase, peptidase S26 HPY04_RS02210 PF00035 Double-stranded RNA binding motif HPY04_RS02210 PF14622 Ribonuclease-III-like HPY04_RS02215 PF07650 KH domain HPY04_RS02215 PF01926 50S ribosome-binding GTPase HPY04_RS02220 PF11967 Recombination protein O N terminal HPY04_RS02220 PF02565 Recombination protein O C terminal HPY04_RS02225 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HPY04_RS02230 PF01648 4'-phosphopantetheinyl transferase superfamily HPY04_RS02245 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS02245 PF00563 EAL domain HPY04_RS02250 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY04_RS02250 PF00072 Response regulator receiver domain HPY04_RS02250 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS02250 PF01627 Hpt domain HPY04_RS02250 PF00672 HAMP domain HPY04_RS02255 PF01938 TRAM domain HPY04_RS02255 PF05958 tRNA (Uracil-5-)-methyltransferase HPY04_RS02260 PF13291 ACT domain HPY04_RS02260 PF02824 TGS domain HPY04_RS02260 PF04607 Region found in RelA / SpoT proteins HPY04_RS02265 PF03819 MazG nucleotide pyrophosphohydrolase domain HPY04_RS02270 PF06418 CTP synthase N-terminus HPY04_RS02270 PF00117 Glutamine amidotransferase class-I HPY04_RS02275 PF00113 Enolase, C-terminal TIM barrel domain HPY04_RS02275 PF03952 Enolase, N-terminal domain HPY04_RS02280 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY04_RS02280 PF01966 HD domain HPY04_RS02280 PF01743 Poly A polymerase head domain HPY04_RS02285 PF01471 Putative peptidoglycan binding domain HPY04_RS02285 PF13401 AAA domain HPY04_RS02295 PF08239 Bacterial SH3 domain HPY04_RS02300 PF01384 Phosphate transporter family HPY04_RS02305 PF01865 Protein of unknown function DUF47 HPY04_RS02310 PF01928 CYTH domain HPY04_RS02315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS02315 PF00672 HAMP domain HPY04_RS02315 PF02743 Cache domain HPY04_RS02320 PF03710 Glutamate-ammonia ligase adenylyltransferase HPY04_RS02320 PF08335 GlnD PII-uridylyltransferase HPY04_RS02325 PF01467 Cytidylyltransferase-like HPY04_RS02325 PF00294 pfkB family carbohydrate kinase HPY04_RS02330 PF02321 Outer membrane efflux protein HPY04_RS02335 PF00293 NUDIX domain HPY04_RS02340 PF06853 Protein of unknown function (DUF1249) HPY04_RS02345 PF00149 Calcineurin-like phosphoesterase HPY04_RS02350 PF05728 Uncharacterised protein family (UPF0227) HPY04_RS02355 PF00986 DNA gyrase B subunit, carboxyl terminus HPY04_RS02355 PF00204 DNA gyrase B HPY04_RS02355 PF01751 Toprim domain HPY04_RS02355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS02360 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY04_RS02360 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY04_RS02365 PF03884 DNA gyrase inhibitor YacG HPY04_RS02370 PF07072 Cell division protein HPY04_RS02375 PF01121 Dephospho-CoA kinase HPY04_RS02380 PF06750 Bacterial Peptidase A24 N-terminal domain HPY04_RS02380 PF01478 Type IV leader peptidase family HPY04_RS02385 PF00482 Type II secretion system (T2SS), protein F HPY04_RS02390 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HPY04_RS02390 PF00437 Type II/IV secretion system protein HPY04_RS02400 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HPY04_RS02400 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HPY04_RS02405 PF01510 N-acetylmuramoyl-L-alanine amidase HPY04_RS02410 PF00258 Flavodoxin HPY04_RS02415 PF00589 Phage integrase family HPY04_RS02415 PF02899 Phage integrase, N-terminal SAM-like domain HPY04_RS02420 PF13098 Thioredoxin-like domain HPY04_RS02420 PF10411 Disulfide bond isomerase protein N-terminus HPY04_RS02425 PF01368 DHH family HPY04_RS02425 PF02272 DHHA1 domain HPY04_RS02425 PF17768 RecJ OB domain HPY04_RS02430 PF02872 5'-nucleotidase, C-terminal domain HPY04_RS02430 PF00149 Calcineurin-like phosphoesterase HPY04_RS02435 PF00392 Bacterial regulatory proteins, gntR family HPY04_RS02435 PF07729 FCD domain HPY04_RS02440 PF17831 Pyruvate dehydrogenase E1 component middle domain HPY04_RS02440 PF00456 Transketolase, thiamine diphosphate binding domain HPY04_RS02445 PF02817 e3 binding domain HPY04_RS02445 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY04_RS02445 PF00364 Biotin-requiring enzyme HPY04_RS02450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY04_RS02450 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS02460 PF01795 MraW methylase family HPY04_RS02465 PF04999 Cell division protein FtsL HPY04_RS02470 PF00905 Penicillin binding protein transpeptidase domain HPY04_RS02470 PF03717 Penicillin-binding Protein dimerisation domain HPY04_RS02475 PF01225 Mur ligase family, catalytic domain HPY04_RS02475 PF02875 Mur ligase family, glutamate ligase domain HPY04_RS02475 PF08245 Mur ligase middle domain HPY04_RS02480 PF01225 Mur ligase family, catalytic domain HPY04_RS02480 PF02875 Mur ligase family, glutamate ligase domain HPY04_RS02480 PF08245 Mur ligase middle domain HPY04_RS02485 PF00953 Glycosyl transferase family 4 HPY04_RS02485 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HPY04_RS02490 PF02875 Mur ligase family, glutamate ligase domain HPY04_RS02490 PF08245 Mur ligase middle domain HPY04_RS02495 PF01098 Cell cycle protein HPY04_RS02500 PF04101 Glycosyltransferase family 28 C-terminal domain HPY04_RS02500 PF03033 Glycosyltransferase family 28 N-terminal domain HPY04_RS02505 PF02875 Mur ligase family, glutamate ligase domain HPY04_RS02505 PF08245 Mur ligase middle domain HPY04_RS02505 PF01225 Mur ligase family, catalytic domain HPY04_RS02510 PF03799 Cell division protein FtsQ HPY04_RS02510 PF08478 POTRA domain, FtsQ-type HPY04_RS02515 PF02491 SHS2 domain inserted in FTSA HPY04_RS02520 PF00091 Tubulin/FtsZ family, GTPase domain HPY04_RS02520 PF12327 FtsZ family, C-terminal domain HPY04_RS02525 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HPY04_RS02535 PF02810 SEC-C motif HPY04_RS02535 PF07517 SecA DEAD-like domain HPY04_RS02535 PF01043 SecA preprotein cross-linking domain HPY04_RS02535 PF07516 SecA Wing and Scaffold domain HPY04_RS02540 PF00293 NUDIX domain HPY04_RS02545 PF01113 Dihydrodipicolinate reductase, N-terminus HPY04_RS02545 PF05173 Dihydrodipicolinate reductase, C-terminus HPY04_RS02555 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HPY04_RS02555 PF00117 Glutamine amidotransferase class-I HPY04_RS02560 PF02142 MGS-like domain HPY04_RS02560 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY04_RS02560 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HPY04_RS02570 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HPY04_RS02580 PF01609 Transposase DDE domain HPY04_RS02580 PF02281 Transposase Tn5 dimerisation domain HPY04_RS02580 PF14706 Transposase DNA-binding HPY04_RS02585 PF01925 Sulfite exporter TauE/SafE HPY04_RS02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS02590 PF03466 LysR substrate binding domain HPY04_RS02595 PF03458 UPF0126 domain HPY04_RS02600 PF01497 Periplasmic binding protein HPY04_RS02610 PF01048 Phosphorylase superfamily HPY04_RS02620 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS02620 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY04_RS02625 PF04898 Glutamate synthase central domain HPY04_RS02625 PF00310 Glutamine amidotransferases class-II HPY04_RS02625 PF01493 GXGXG motif HPY04_RS02625 PF01645 Conserved region in glutamate synthase HPY04_RS02630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY04_RS02630 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS02635 PF01493 GXGXG motif HPY04_RS02635 PF04898 Glutamate synthase central domain HPY04_RS02635 PF01645 Conserved region in glutamate synthase HPY04_RS02635 PF00310 Glutamine amidotransferases class-II HPY04_RS02640 PF04055 Radical SAM superfamily HPY04_RS02640 PF16199 Radical_SAM C-terminal domain HPY04_RS02645 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS02645 PF00360 Phytochrome region HPY04_RS02645 PF01590 GAF domain HPY04_RS02645 PF00563 EAL domain HPY04_RS02650 PF18415 Histidine kinase receptor ArcB trans-membrane domain HPY04_RS02650 PF00072 Response regulator receiver domain HPY04_RS02650 PF00989 PAS fold HPY04_RS02650 PF01627 Hpt domain HPY04_RS02650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS02650 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS02655 PF00072 Response regulator receiver domain HPY04_RS02655 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS02665 PF03737 Aldolase/RraA HPY04_RS02680 PF01842 ACT domain HPY04_RS02680 PF03447 Homoserine dehydrogenase, NAD binding domain HPY04_RS02680 PF13840 ACT domain HPY04_RS02680 PF00696 Amino acid kinase family HPY04_RS02680 PF00742 Homoserine dehydrogenase HPY04_RS02685 PF00288 GHMP kinases N terminal domain HPY04_RS02685 PF08544 GHMP kinases C terminal HPY04_RS02690 PF14821 Threonine synthase N terminus HPY04_RS02690 PF00291 Pyridoxal-phosphate dependent enzyme HPY04_RS02695 PF01228 Glycine radical HPY04_RS02700 PF01261 Xylose isomerase-like TIM barrel HPY04_RS02705 PF03167 Uracil DNA glycosylase superfamily HPY04_RS02720 PF01235 Sodium:alanine symporter family HPY04_RS02725 PF03883 Peroxide stress protein YaaA HPY04_RS02735 PF01026 TatD related DNase HPY04_RS02740 PF01773 Na+ dependent nucleoside transporter N-terminus HPY04_RS02740 PF07662 Na+ dependent nucleoside transporter C-terminus HPY04_RS02740 PF07670 Nucleoside recognition HPY04_RS02750 PF01791 DeoC/LacD family aldolase HPY04_RS02755 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HPY04_RS02755 PF00591 Glycosyl transferase family, a/b domain HPY04_RS02755 PF02885 Glycosyl transferase family, helical bundle domain HPY04_RS02760 PF01676 Metalloenzyme superfamily HPY04_RS02765 PF01048 Phosphorylase superfamily HPY04_RS02775 PF18429 Domain of unknown function (DUF5609) HPY04_RS02785 PF18073 Rubredoxin metal binding domain HPY04_RS02790 PF03764 Elongation factor G, domain IV HPY04_RS02790 PF03144 Elongation factor Tu domain 2 HPY04_RS02790 PF14492 Elongation Factor G, domain II HPY04_RS02790 PF00009 Elongation factor Tu GTP binding domain HPY04_RS02790 PF00679 Elongation factor G C-terminus HPY04_RS02795 PF00501 AMP-binding enzyme HPY04_RS02800 PF00072 Response regulator receiver domain HPY04_RS02810 PF02837 Glycosyl hydrolases family 2, sugar binding domain HPY04_RS02810 PF00703 Glycosyl hydrolases family 2 HPY04_RS02810 PF02929 Beta galactosidase small chain HPY04_RS02810 PF16353 Domain of unknown function(DUF4981) HPY04_RS02810 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HPY04_RS02815 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS02820 PF01588 Putative tRNA binding domain HPY04_RS02830 PF01544 CorA-like Mg2+ transporter protein HPY04_RS02835 PF02080 TrkA-C domain HPY04_RS02835 PF18030 RimK PreATP-grasp domain HPY04_RS02835 PF08443 RimK-like ATP-grasp domain HPY04_RS02840 PF00583 Acetyltransferase (GNAT) family HPY04_RS02850 PF14602 Hexapeptide repeat of succinyl-transferase HPY04_RS02850 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HPY04_RS02855 PF07130 YebG protein HPY04_RS02870 PF17946 RecC C-terminal domain HPY04_RS02875 PF13361 UvrD-like helicase C-terminal domain HPY04_RS02875 PF00580 UvrD/REP helicase N-terminal domain HPY04_RS02875 PF12705 PD-(D/E)XK nuclease superfamily HPY04_RS02880 PF13538 UvrD-like helicase C-terminal domain HPY04_RS02890 PF00696 Amino acid kinase family HPY04_RS02890 PF00583 Acetyltransferase (GNAT) family HPY04_RS02900 PF06725 3D domain HPY04_RS02900 PF03562 MltA specific insert domain HPY04_RS02905 PF00899 ThiF family HPY04_RS02910 PF02657 Fe-S metabolism associated domain HPY04_RS02920 PF01965 DJ-1/PfpI family HPY04_RS02925 PF08546 Ketopantoate reductase PanE/ApbA C terminal HPY04_RS02925 PF02558 Ketopantoate reductase PanE/ApbA HPY04_RS02930 PF03502 Nucleoside-specific channel-forming protein, Tsx HPY04_RS02940 PF04545 Sigma-70, region 4 HPY04_RS02940 PF04542 Sigma-70 region 2 HPY04_RS02950 PF07690 Major Facilitator Superfamily HPY04_RS02955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY04_RS02965 PF05175 Methyltransferase small domain HPY04_RS02970 PF01722 BolA-like protein HPY04_RS02975 PF11973 NQRA C-terminal domain HPY04_RS02975 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HPY04_RS02980 PF03116 NQR2, RnfD, RnfE family HPY04_RS02985 PF04205 FMN-binding domain HPY04_RS02990 PF02508 Rnf-Nqr subunit, membrane protein HPY04_RS02995 PF02508 Rnf-Nqr subunit, membrane protein HPY04_RS03000 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY04_RS03000 PF00970 Oxidoreductase FAD-binding domain HPY04_RS03000 PF00175 Oxidoreductase NAD-binding domain HPY04_RS03005 PF02424 ApbE family HPY04_RS03015 PF00817 impB/mucB/samB family HPY04_RS03015 PF11798 IMS family HHH motif HPY04_RS03025 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS03025 PF17158 Membrane-associated sensor, integral membrane domain HPY04_RS03030 PF00209 Sodium:neurotransmitter symporter family HPY04_RS03040 PF08443 RimK-like ATP-grasp domain HPY04_RS03040 PF18030 RimK PreATP-grasp domain HPY04_RS03045 PF18030 RimK PreATP-grasp domain HPY04_RS03045 PF08443 RimK-like ATP-grasp domain HPY04_RS03050 PF01546 Peptidase family M20/M25/M40 HPY04_RS03050 PF07687 Peptidase dimerisation domain HPY04_RS03055 PF00860 Permease family HPY04_RS03060 PF00156 Phosphoribosyl transferase domain HPY04_RS03070 PF07417 Sigma factor-binding transcriptional regulator Crl HPY04_RS03075 PF00696 Amino acid kinase family HPY04_RS03075 PF01472 PUA domain HPY04_RS03080 PF00171 Aldehyde dehydrogenase family HPY04_RS03085 PF03477 ATP cone domain HPY04_RS03090 PF01872 RibD C-terminal domain HPY04_RS03090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY04_RS03095 PF00677 Lumazine binding domain HPY04_RS03100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY04_RS03100 PF00925 GTP cyclohydrolase II HPY04_RS03105 PF00885 6,7-dimethyl-8-ribityllumazine synthase HPY04_RS03110 PF01029 NusB family HPY04_RS03115 PF00586 AIR synthase related protein, N-terminal domain HPY04_RS03115 PF02769 AIR synthase related protein, C-terminal domain HPY04_RS03120 PF04608 Phosphatidylglycerophosphatase A HPY04_RS03125 PF11944 Protein of unknown function (DUF3461) HPY04_RS03130 PF01966 HD domain HPY04_RS03130 PF01909 Nucleotidyltransferase domain HPY04_RS03130 PF08335 GlnD PII-uridylyltransferase HPY04_RS03135 PF00557 Metallopeptidase family M24 HPY04_RS03140 PF00318 Ribosomal protein S2 HPY04_RS03145 PF00889 Elongation factor TS HPY04_RS03150 PF00696 Amino acid kinase family HPY04_RS03155 PF01765 Ribosome recycling factor HPY04_RS03160 PF01255 Putative undecaprenyl diphosphate synthase HPY04_RS03170 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPY04_RS03170 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HPY04_RS03170 PF13288 DXP reductoisomerase C-terminal domain HPY04_RS03175 PF02163 Peptidase family M50 HPY04_RS03175 PF17820 PDZ domain HPY04_RS03180 PF07244 Surface antigen variable number repeat HPY04_RS03180 PF01103 Surface antigen HPY04_RS03185 PF03938 Outer membrane protein (OmpH-like) HPY04_RS03190 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HPY04_RS03190 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS03195 PF07977 FabA-like domain HPY04_RS03200 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS03200 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HPY04_RS03205 PF02684 Lipid-A-disaccharide synthetase HPY04_RS03210 PF01351 Ribonuclease HII HPY04_RS03215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPY04_RS03215 PF01336 OB-fold nucleic acid binding domain HPY04_RS03215 PF02811 PHP domain HPY04_RS03215 PF14579 Helix-hairpin-helix motif HPY04_RS03215 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPY04_RS03220 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HPY04_RS03225 PF01171 PP-loop family HPY04_RS03225 PF09179 TilS substrate binding domain HPY04_RS03225 PF11734 TilS substrate C-terminal domain HPY04_RS03230 PF00034 Cytochrome c HPY04_RS03235 PF05870 Phenolic acid decarboxylase (PAD) HPY04_RS03240 PF00543 Nitrogen regulatory protein P-II HPY04_RS03245 PF03372 Endonuclease/Exonuclease/phosphatase family HPY04_RS03250 PF01464 Transglycosylase SLT domain HPY04_RS03250 PF01476 LysM domain HPY04_RS03255 PF00753 Metallo-beta-lactamase superfamily HPY04_RS03255 PF16123 Hydroxyacylglutathione hydrolase C-terminus HPY04_RS03260 PF08241 Methyltransferase domain HPY04_RS03265 PF00075 RNase H HPY04_RS03270 PF00929 Exonuclease HPY04_RS03280 PF09317 Domain of unknown function (DUF1974) HPY04_RS03280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY04_RS03280 PF02770 Acyl-CoA dehydrogenase, middle domain HPY04_RS03280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY04_RS03285 PF13580 SIS domain HPY04_RS03290 PF13230 Glutamine amidotransferases class-II HPY04_RS03295 PF00551 Formyl transferase HPY04_RS03300 PF02769 AIR synthase related protein, C-terminal domain HPY04_RS03300 PF00586 AIR synthase related protein, N-terminal domain HPY04_RS03310 PF08448 PAS fold HPY04_RS03310 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS03315 PF00849 RNA pseudouridylate synthase HPY04_RS03315 PF01479 S4 domain HPY04_RS03320 PF01713 Smr domain HPY04_RS03340 PF03173 Putative carbohydrate binding domain HPY04_RS03340 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HPY04_RS03340 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY04_RS03340 PF02838 Glycosyl hydrolase family 20, domain 2 HPY04_RS03350 PF00403 Heavy-metal-associated domain HPY04_RS03355 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY04_RS03360 PF01389 OmpA-like transmembrane domain HPY04_RS03360 PF00691 OmpA family HPY04_RS03370 PF07715 TonB-dependent Receptor Plug Domain HPY04_RS03375 PF04954 Siderophore-interacting protein HPY04_RS03375 PF08021 Siderophore-interacting FAD-binding domain HPY04_RS03380 PF00550 Phosphopantetheine attachment site HPY04_RS03380 PF08242 Methyltransferase domain HPY04_RS03380 PF00668 Condensation domain HPY04_RS03380 PF00501 AMP-binding enzyme HPY04_RS03415 PF01584 CheW-like domain HPY04_RS03415 PF00072 Response regulator receiver domain HPY04_RS03420 PF01739 CheR methyltransferase, SAM binding domain HPY04_RS03420 PF03705 CheR methyltransferase, all-alpha domain HPY04_RS03425 PF00460 Flagella basal body rod protein HPY04_RS03430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY04_RS03430 PF00460 Flagella basal body rod protein HPY04_RS03435 PF13860 FlgD Ig-like domain HPY04_RS03435 PF13861 FlgD Tudor-like domain HPY04_RS03435 PF03963 Flagellar hook capping protein - N-terminal region HPY04_RS03440 PF07559 Flagellar basal body protein FlaE HPY04_RS03440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY04_RS03440 PF00460 Flagella basal body rod protein HPY04_RS03445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY04_RS03445 PF00460 Flagella basal body rod protein HPY04_RS03450 PF00460 Flagella basal body rod protein HPY04_RS03450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY04_RS03455 PF02107 Flagellar L-ring protein HPY04_RS03460 PF02119 Flagellar P-ring protein HPY04_RS03465 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HPY04_RS03465 PF10135 Rod binding protein HPY04_RS03470 PF07196 Flagellin hook IN motif HPY04_RS03470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY04_RS03480 PF00700 Bacterial flagellin C-terminal helical region HPY04_RS03480 PF07196 Flagellin hook IN motif HPY04_RS03480 PF00669 Bacterial flagellin N-terminal helical region HPY04_RS03485 PF00669 Bacterial flagellin N-terminal helical region HPY04_RS03485 PF00700 Bacterial flagellin C-terminal helical region HPY04_RS03485 PF07196 Flagellin hook IN motif HPY04_RS03570 PF01926 50S ribosome-binding GTPase HPY04_RS03570 PF06071 Protein of unknown function (DUF933) HPY04_RS03575 PF01195 Peptidyl-tRNA hydrolase HPY04_RS03580 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HPY04_RS03580 PF14572 Phosphoribosyl synthetase-associated domain HPY04_RS03585 PF00288 GHMP kinases N terminal domain HPY04_RS03585 PF08544 GHMP kinases C terminal HPY04_RS03590 PF03550 Outer membrane lipoprotein LolB HPY04_RS03595 PF01488 Shikimate / quinate 5-dehydrogenase HPY04_RS03595 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HPY04_RS03595 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HPY04_RS03600 PF00472 RF-1 domain HPY04_RS03600 PF03462 PCRF domain HPY04_RS03605 PF17827 PrmC N-terminal domain HPY04_RS03605 PF13847 Methyltransferase domain HPY04_RS03610 PF04247 Invasion gene expression up-regulator, SirB HPY04_RS03615 PF13369 Transglutaminase-like superfamily HPY04_RS03620 PF00793 DAHP synthetase I family HPY04_RS03625 PF00149 Calcineurin-like phosphoesterase HPY04_RS03625 PF02872 5'-nucleotidase, C-terminal domain HPY04_RS03630 PF04073 Aminoacyl-tRNA editing domain HPY04_RS03635 PF00860 Permease family HPY04_RS03650 PF03358 NADPH-dependent FMN reductase HPY04_RS03655 PF03960 ArsC family HPY04_RS03660 PF01435 Peptidase family M48 HPY04_RS03660 PF13181 Tetratricopeptide repeat HPY04_RS03670 PF01594 AI-2E family transporter HPY04_RS03675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS03675 PF00672 HAMP domain HPY04_RS03675 PF02743 Cache domain HPY04_RS03680 PF00578 AhpC/TSA family HPY04_RS03690 PF00701 Dihydrodipicolinate synthetase family HPY04_RS03695 PF06804 NlpB/DapX lipoprotein HPY04_RS03705 PF02557 D-alanyl-D-alanine carboxypeptidase HPY04_RS03710 PF07687 Peptidase dimerisation domain HPY04_RS03710 PF01546 Peptidase family M20/M25/M40 HPY04_RS03715 PF03960 ArsC family HPY04_RS03730 PF11143 Protein of unknown function (DUF2919) HPY04_RS03735 PF04261 Dyp-type peroxidase family HPY04_RS03740 PF00669 Bacterial flagellin N-terminal helical region HPY04_RS03740 PF00700 Bacterial flagellin C-terminal helical region HPY04_RS03740 PF07196 Flagellin hook IN motif HPY04_RS03745 PF07196 Flagellin hook IN motif HPY04_RS03745 PF00700 Bacterial flagellin C-terminal helical region HPY04_RS03745 PF00669 Bacterial flagellin N-terminal helical region HPY04_RS03750 PF00700 Bacterial flagellin C-terminal helical region HPY04_RS03750 PF07196 Flagellin hook IN motif HPY04_RS03750 PF00669 Bacterial flagellin N-terminal helical region HPY04_RS03755 PF03646 FlaG protein HPY04_RS03760 PF02465 Flagellar hook-associated protein 2 N-terminus HPY04_RS03760 PF07195 Flagellar hook-associated protein 2 C-terminus HPY04_RS03760 PF07196 Flagellin hook IN motif HPY04_RS03770 PF02561 Flagellar protein FliS HPY04_RS03775 PF02954 Bacterial regulatory protein, Fis family HPY04_RS03775 PF00158 Sigma-54 interaction domain HPY04_RS03775 PF06490 Flagellar regulatory protein FleQ HPY04_RS03780 PF00989 PAS fold HPY04_RS03780 PF13426 PAS domain HPY04_RS03780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS03780 PF13493 Domain of unknown function (DUF4118) HPY04_RS03780 PF08447 PAS fold HPY04_RS03780 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS03785 PF02954 Bacterial regulatory protein, Fis family HPY04_RS03785 PF00072 Response regulator receiver domain HPY04_RS03785 PF00158 Sigma-54 interaction domain HPY04_RS03790 PF02049 Flagellar hook-basal body complex protein FliE HPY04_RS03795 PF08345 Flagellar M-ring protein C-terminal HPY04_RS03795 PF01514 Secretory protein of YscJ/FliF family HPY04_RS03800 PF01706 FliG C-terminal domain HPY04_RS03800 PF14841 FliG middle domain HPY04_RS03800 PF14842 FliG N-terminal domain HPY04_RS03805 PF02108 Flagellar assembly protein FliH HPY04_RS03810 PF18269 T3SS EscN ATPase C-terminal domain HPY04_RS03810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY04_RS03830 PF03748 Flagellar basal body-associated protein FliL HPY04_RS03835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY04_RS03835 PF02154 Flagellar motor switch protein FliM HPY04_RS03840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY04_RS03845 PF04347 Flagellar biosynthesis protein, FliO HPY04_RS03850 PF00813 FliP family HPY04_RS03855 PF01313 Bacterial export proteins, family 3 HPY04_RS03860 PF01311 Bacterial export proteins, family 1 HPY04_RS03865 PF01312 FlhB HrpN YscU SpaS Family HPY04_RS03870 PF01713 Smr domain HPY04_RS03875 PF05175 Methyltransferase small domain HPY04_RS03880 PF01264 Chorismate synthase HPY04_RS03885 PF03458 UPF0126 domain HPY04_RS03890 PF04315 Elongation factor P hydroxylase HPY04_RS03895 PF08891 YfcL protein HPY04_RS03900 PF03358 NADPH-dependent FMN reductase HPY04_RS03905 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HPY04_RS03905 PF01266 FAD dependent oxidoreductase HPY04_RS03910 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY04_RS03910 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY04_RS03915 PF11890 Domain of unknown function (DUF3410) HPY04_RS03915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY04_RS03915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY04_RS03920 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY04_RS03920 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY04_RS03925 PF01475 Ferric uptake regulator family HPY04_RS03935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS03935 PF03466 LysR substrate binding domain HPY04_RS03940 PF03788 LrgA family HPY04_RS03945 PF04172 LrgB-like family HPY04_RS03950 PF00258 Flavodoxin HPY04_RS03960 PF12697 Alpha/beta hydrolase family HPY04_RS03965 PF17206 SeqA protein N-terminal domain HPY04_RS03965 PF03925 SeqA protein C-terminal domain HPY04_RS03970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY04_RS03970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY04_RS03970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY04_RS03970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY04_RS03980 PF01784 NIF3 (NGG1p interacting factor 3) HPY04_RS03985 PF00285 Citrate synthase, C-terminal domain HPY04_RS03990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY04_RS03995 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY04_RS04000 PF00890 FAD binding domain HPY04_RS04000 PF02910 Fumarate reductase flavoprotein C-term HPY04_RS04005 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY04_RS04010 PF16078 2-oxoglutarate dehydrogenase N-terminus HPY04_RS04010 PF00676 Dehydrogenase E1 component HPY04_RS04010 PF02779 Transketolase, pyrimidine binding domain HPY04_RS04010 PF16870 2-oxoglutarate dehydrogenase C-terminal HPY04_RS04015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY04_RS04015 PF00364 Biotin-requiring enzyme HPY04_RS04015 PF02817 e3 binding domain HPY04_RS04020 PF08442 ATP-grasp domain HPY04_RS04020 PF00549 CoA-ligase HPY04_RS04025 PF00549 CoA-ligase HPY04_RS04025 PF02629 CoA binding domain HPY04_RS04030 PF00950 ABC 3 transport family HPY04_RS04035 PF00005 ABC transporter HPY04_RS04040 PF01297 Zinc-uptake complex component A periplasmic HPY04_RS04045 PF02311 AraC-like ligand binding domain HPY04_RS04045 PF12833 Helix-turn-helix domain HPY04_RS04050 PF04023 FeoA domain HPY04_RS04055 PF02421 Ferrous iron transport protein B HPY04_RS04055 PF07670 Nucleoside recognition HPY04_RS04055 PF07664 Ferrous iron transport protein B C terminus HPY04_RS04070 PF00750 tRNA synthetases class I (R) HPY04_RS04070 PF05746 DALR anticodon binding domain HPY04_RS04070 PF03485 Arginyl tRNA synthetase N terminal domain HPY04_RS04080 PF05193 Peptidase M16 inactive domain HPY04_RS04080 PF00675 Insulinase (Peptidase family M16) HPY04_RS04085 PF00300 Histidine phosphatase superfamily (branch 1) HPY04_RS04090 PF00771 FHIPEP family HPY04_RS04095 PF00448 SRP54-type protein, GTPase domain HPY04_RS04100 PF10609 NUBPL iron-transfer P-loop NTPase HPY04_RS04105 PF04542 Sigma-70 region 2 HPY04_RS04105 PF04539 Sigma-70 region 3 HPY04_RS04105 PF04545 Sigma-70, region 4 HPY04_RS04110 PF00072 Response regulator receiver domain HPY04_RS04115 PF04344 Chemotaxis phosphatase, CheZ HPY04_RS04120 PF01627 Hpt domain HPY04_RS04120 PF01584 CheW-like domain HPY04_RS04120 PF00072 Response regulator receiver domain HPY04_RS04120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS04120 PF02895 Signal transducing histidine kinase, homodimeric domain HPY04_RS04125 PF00072 Response regulator receiver domain HPY04_RS04125 PF01339 CheB methylesterase HPY04_RS04130 PF13614 AAA domain HPY04_RS04140 PF01584 CheW-like domain HPY04_RS04150 PF00005 ABC transporter HPY04_RS04155 PF03379 CcmB protein HPY04_RS04160 PF01578 Cytochrome C assembly protein HPY04_RS04165 PF04995 Heme exporter protein D (CcmD) HPY04_RS04170 PF03100 CcmE HPY04_RS04175 PF01578 Cytochrome C assembly protein HPY04_RS04175 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HPY04_RS04180 PF08534 Redoxin HPY04_RS04185 PF03918 Cytochrome C biogenesis protein HPY04_RS04195 PF04333 MlaA lipoprotein HPY04_RS04210 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY04_RS04210 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY04_RS04215 PF00462 Glutaredoxin HPY04_RS04220 PF01131 DNA topoisomerase HPY04_RS04220 PF01751 Toprim domain HPY04_RS04225 PF00850 Histone deacetylase domain HPY04_RS04240 PF11893 Domain of unknown function (DUF3413) HPY04_RS04240 PF00884 Sulfatase HPY04_RS04245 PF07208 Protein of unknown function (DUF1414) HPY04_RS04250 PF04245 37-kD nucleoid-associated bacterial protein HPY04_RS04260 PF03553 Na+/H+ antiporter family HPY04_RS04265 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY04_RS04265 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY04_RS04270 PF01914 MarC family integral membrane protein HPY04_RS04275 PF00465 Iron-containing alcohol dehydrogenase HPY04_RS04275 PF00171 Aldehyde dehydrogenase family HPY04_RS04285 PF00916 Sulfate permease family HPY04_RS04285 PF01740 STAS domain HPY04_RS04290 PF12111 Polyribonucleotide phosphorylase C terminal HPY04_RS04290 PF00575 S1 RNA binding domain HPY04_RS04290 PF10150 Ribonuclease E/G family HPY04_RS04295 PF01479 S4 domain HPY04_RS04295 PF00849 RNA pseudouridylate synthase HPY04_RS04300 PF02545 Maf-like protein HPY04_RS04305 PF02620 Large ribosomal RNA subunit accumulation protein YceD HPY04_RS04310 PF01783 Ribosomal L32p protein family HPY04_RS04315 PF02504 Fatty acid synthesis protein HPY04_RS04320 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY04_RS04320 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY04_RS04325 PF00698 Acyl transferase domain HPY04_RS04335 PF00550 Phosphopantetheine attachment site HPY04_RS04340 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY04_RS04340 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY04_RS04345 PF01063 Amino-transferase class IV HPY04_RS04350 PF02618 YceG-like family HPY04_RS04355 PF02223 Thymidylate kinase HPY04_RS04360 PF09115 DNA polymerase III, delta subunit, C terminal HPY04_RS04365 PF01026 TatD related DNase HPY04_RS04370 PF00367 phosphotransferase system, EIIB HPY04_RS04370 PF02378 Phosphotransferase system, EIIC HPY04_RS04375 PF14706 Transposase DNA-binding HPY04_RS04375 PF01609 Transposase DDE domain HPY04_RS04375 PF02281 Transposase Tn5 dimerisation domain HPY04_RS04385 PF00209 Sodium:neurotransmitter symporter family HPY04_RS04400 PF01734 Patatin-like phospholipase HPY04_RS04405 PF00224 Pyruvate kinase, barrel domain HPY04_RS04405 PF02887 Pyruvate kinase, alpha/beta domain HPY04_RS04410 PF00480 ROK family HPY04_RS04415 PF01584 CheW-like domain HPY04_RS04415 PF00072 Response regulator receiver domain HPY04_RS04430 PF13847 Methyltransferase domain HPY04_RS04440 PF01263 Aldose 1-epimerase HPY04_RS04445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY04_RS04445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY04_RS04450 PF01641 SelR domain HPY04_RS04460 PF07023 Protein of unknown function (DUF1315) HPY04_RS04465 PF00710 Asparaginase, N-terminal HPY04_RS04465 PF17763 Glutaminase/Asparaginase C-terminal domain HPY04_RS04470 PF01343 Peptidase family S49 HPY04_RS04475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY04_RS04475 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS04480 PF01842 ACT domain HPY04_RS04480 PF00551 Formyl transferase HPY04_RS04490 PF04851 Type III restriction enzyme, res subunit HPY04_RS04490 PF13307 Helicase C-terminal domain HPY04_RS04495 PF00814 Glycoprotease family HPY04_RS04510 PF00561 alpha/beta hydrolase fold HPY04_RS04515 PF00501 AMP-binding enzyme HPY04_RS04515 PF13193 AMP-binding enzyme C-terminal domain HPY04_RS04520 PF01612 3'-5' exonuclease HPY04_RS04520 PF00570 HRDC domain HPY04_RS04535 PF13286 Phosphohydrolase-associated domain HPY04_RS04535 PF01966 HD domain HPY04_RS04545 PF00155 Aminotransferase class I and II HPY04_RS04550 PF00425 chorismate binding enzyme HPY04_RS04555 PF16582 Middle domain of thiamine pyrophosphate HPY04_RS04555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY04_RS04555 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY04_RS04560 PF12697 Alpha/beta hydrolase family HPY04_RS04565 PF00378 Enoyl-CoA hydratase/isomerase HPY04_RS04570 PF13378 Enolase C-terminal domain-like HPY04_RS04575 PF13193 AMP-binding enzyme C-terminal domain HPY04_RS04575 PF00501 AMP-binding enzyme HPY04_RS04580 PF03594 Benzoate membrane transport protein HPY04_RS04585 PF07690 Major Facilitator Superfamily HPY04_RS04605 PF04170 NlpE N-terminal domain HPY04_RS04610 PF03776 Septum formation topological specificity factor MinE HPY04_RS04615 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY04_RS04620 PF03775 Septum formation inhibitor MinC, C-terminal domain HPY04_RS04620 PF05209 Septum formation inhibitor MinC, N-terminal domain HPY04_RS04625 PF05166 YcgL domain HPY04_RS04630 PF13406 Transglycosylase SLT domain HPY04_RS04635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS04635 PF03466 LysR substrate binding domain HPY04_RS04640 PF07662 Na+ dependent nucleoside transporter C-terminus HPY04_RS04640 PF07670 Nucleoside recognition HPY04_RS04640 PF01773 Na+ dependent nucleoside transporter N-terminus HPY04_RS04645 PF00704 Glycosyl hydrolases family 18 HPY04_RS04650 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY04_RS04655 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY04_RS04655 PF00384 Molybdopterin oxidoreductase HPY04_RS04655 PF01568 Molydopterin dinucleotide binding domain HPY04_RS04665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS04665 PF03466 LysR substrate binding domain HPY04_RS04670 PF01494 FAD binding domain HPY04_RS04675 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HPY04_RS04680 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HPY04_RS04680 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HPY04_RS04725 PF13188 PAS domain HPY04_RS04725 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS04725 PF00563 EAL domain HPY04_RS04725 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS04735 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HPY04_RS04740 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY04_RS04745 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY04_RS04750 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY04_RS04755 PF00072 Response regulator receiver domain HPY04_RS04755 PF00158 Sigma-54 interaction domain HPY04_RS04755 PF02954 Bacterial regulatory protein, Fis family HPY04_RS04760 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS04760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS04760 PF02743 Cache domain HPY04_RS04770 PF05698 Bacterial trigger factor protein (TF) C-terminus HPY04_RS04770 PF05697 Bacterial trigger factor protein (TF) HPY04_RS04770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY04_RS04775 PF00574 Clp protease HPY04_RS04780 PF06689 ClpX C4-type zinc finger HPY04_RS04780 PF07724 AAA domain (Cdc48 subfamily) HPY04_RS04780 PF10431 C-terminal, D2-small domain, of ClpB protein HPY04_RS04785 PF00004 ATPase family associated with various cellular activities (AAA) HPY04_RS04785 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY04_RS04785 PF02190 ATP-dependent protease La (LON) substrate-binding domain HPY04_RS04790 PF00216 Bacterial DNA-binding protein HPY04_RS04795 PF13145 PPIC-type PPIASE domain HPY04_RS04805 PF02224 Cytidylate kinase HPY04_RS04810 PF00575 S1 RNA binding domain HPY04_RS04815 PF00216 Bacterial DNA-binding protein HPY04_RS04820 PF06305 Lipopolysaccharide assembly protein A domain HPY04_RS04825 PF18073 Rubredoxin metal binding domain HPY04_RS04830 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY04_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS04840 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS04840 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY04_RS04845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY04_RS04850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS04850 PF00005 ABC transporter HPY04_RS04855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS04855 PF00005 ABC transporter HPY04_RS04870 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HPY04_RS04880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS04880 PF03466 LysR substrate binding domain HPY04_RS04890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY04_RS04890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY04_RS04895 PF01037 Lrp/AsnC ligand binding domain HPY04_RS04900 PF17854 FtsK alpha domain HPY04_RS04900 PF01580 FtsK/SpoIIIE family HPY04_RS04900 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HPY04_RS04900 PF09397 Ftsk gamma domain HPY04_RS04905 PF02600 Disulfide bond formation protein DsbB HPY04_RS04910 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HPY04_RS04915 PF00392 Bacterial regulatory proteins, gntR family HPY04_RS04915 PF07840 FadR C-terminal domain HPY04_RS04925 PF00672 HAMP domain HPY04_RS04925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS04930 PF01230 HIT domain HPY04_RS04945 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HPY04_RS04945 PF13036 Peptidoglycan-synthase activator LpoB HPY04_RS04955 PF05728 Uncharacterised protein family (UPF0227) HPY04_RS04960 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS04970 PF16458 Beta-prism lectin HPY04_RS04970 PF12563 Hemolytic toxin N terminal HPY04_RS04970 PF07968 Leukocidin/Hemolysin toxin family HPY04_RS04980 PF00271 Helicase conserved C-terminal domain HPY04_RS04980 PF03461 TRCF domain HPY04_RS04980 PF00270 DEAD/DEAH box helicase HPY04_RS04980 PF02559 CarD-like/TRCF domain HPY04_RS04980 PF17757 UvrB interaction domain HPY04_RS04990 PF02687 FtsX-like permease family HPY04_RS04990 PF12704 MacB-like periplasmic core domain HPY04_RS04995 PF00005 ABC transporter HPY04_RS05000 PF12704 MacB-like periplasmic core domain HPY04_RS05000 PF02687 FtsX-like permease family HPY04_RS05010 PF00753 Metallo-beta-lactamase superfamily HPY04_RS05010 PF03772 Competence protein HPY04_RS05010 PF13567 Domain of unknown function (DUF4131) HPY04_RS05015 PF00005 ABC transporter HPY04_RS05015 PF00664 ABC transporter transmembrane region HPY04_RS05020 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HPY04_RS05025 PF03966 Trm112p-like protein HPY04_RS05030 PF02348 Cytidylyltransferase HPY04_RS05035 PF04293 SpoVR like protein HPY04_RS05040 PF04285 Protein of unknown function (DUF444) HPY04_RS05045 PF08298 PrkA AAA domain HPY04_RS05045 PF06798 PrkA serine protein kinase C-terminal domain HPY04_RS05050 PF03887 YfbU domain HPY04_RS05060 PF04055 Radical SAM superfamily HPY04_RS05065 PF00672 HAMP domain HPY04_RS05065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS05065 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS05075 PF01228 Glycine radical HPY04_RS05075 PF02901 Pyruvate formate lyase-like HPY04_RS05085 PF00005 ABC transporter HPY04_RS05090 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY04_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS05100 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS05105 PF03372 Endonuclease/Exonuclease/phosphatase family HPY04_RS05110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS05110 PF00672 HAMP domain HPY04_RS05115 PF10689 Protein of unknown function (DUF2496) HPY04_RS05120 PF07445 Primosomal replication protein priC HPY04_RS05125 PF01925 Sulfite exporter TauE/SafE HPY04_RS05130 PF06733 DEAD_2 HPY04_RS05130 PF13307 Helicase C-terminal domain HPY04_RS05135 PF13609 Gram-negative porin HPY04_RS05140 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY04_RS05145 PF02810 SEC-C motif HPY04_RS05150 PF08668 HDOD domain HPY04_RS05150 PF00563 EAL domain HPY04_RS05155 PF00149 Calcineurin-like phosphoesterase HPY04_RS05160 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY04_RS05165 PF01406 tRNA synthetases class I (C) catalytic domain HPY04_RS05165 PF09190 DALR domain HPY04_RS05170 PF02075 Crossover junction endodeoxyribonuclease RuvC HPY04_RS05175 PF01330 RuvA N terminal domain HPY04_RS05175 PF07499 RuvA, C-terminal domain HPY04_RS05180 PF17864 RuvB AAA lid domain HPY04_RS05180 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPY04_RS05180 PF05491 RuvB C-terminal winged helix domain HPY04_RS05185 PF01654 Cytochrome bd terminal oxidase subunit I HPY04_RS05190 PF02322 Cytochrome bd terminal oxidase subunit II HPY04_RS05195 PF08173 Membrane bound YbgT-like protein HPY04_RS05200 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HPY04_RS05205 PF03061 Thioesterase superfamily HPY04_RS05210 PF01618 MotA/TolQ/ExbB proton channel family HPY04_RS05215 PF02472 Biopolymer transport protein ExbD/TolR HPY04_RS05225 PF04052 TolB amino-terminal domain HPY04_RS05225 PF07676 WD40-like Beta Propeller Repeat HPY04_RS05230 PF00691 OmpA family HPY04_RS05240 PF02445 Quinolinate synthetase A protein HPY04_RS05250 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS05250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS05250 PF09308 LuxQ, periplasmic HPY04_RS05250 PF00072 Response regulator receiver domain HPY04_RS05255 PF06610 L-alanine exporter HPY04_RS05260 PF00171 Aldehyde dehydrogenase family HPY04_RS05265 PF01590 GAF domain HPY04_RS05265 PF02954 Bacterial regulatory protein, Fis family HPY04_RS05265 PF00158 Sigma-54 interaction domain HPY04_RS05270 PF09905 DNA-binding protein VF530 HPY04_RS05280 PF03441 FAD binding domain of DNA photolyase HPY04_RS05280 PF00875 DNA photolyase HPY04_RS05295 PF12102 Domain of unknown function (DUF3578) HPY04_RS05295 PF07728 AAA domain (dynein-related subfamily) HPY04_RS05325 PF09264 Vibrio cholerae sialidase, lectin insertion HPY04_RS05325 PF13088 BNR repeat-like domain HPY04_RS05330 PF01979 Amidohydrolase family HPY04_RS05335 PF00480 ROK family HPY04_RS05340 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase HPY04_RS05345 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY04_RS05350 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY04_RS05355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY04_RS05360 PF00701 Dihydrodipicolinate synthetase family HPY04_RS05365 PF01380 SIS domain HPY04_RS05365 PF01418 Helix-turn-helix domain, rpiR family HPY04_RS05370 PF01344 Kelch motif HPY04_RS05375 PF07646 Kelch motif HPY04_RS05385 PF11999 Protein of unknown function (DUF3494) HPY04_RS05385 PF02368 Bacterial Ig-like domain (group 2) HPY04_RS05410 PF00561 alpha/beta hydrolase fold HPY04_RS05415 PF03347 Vibrio thermostable direct hemolysin HPY04_RS05420 PF13402 Peptidase M60, enhancin and enhancin-like HPY04_RS05420 PF17291 N-terminal domain of M60-like peptidases HPY04_RS05420 PF13322 Domain of unknown function (DUF4092) HPY04_RS05525 PF00771 FHIPEP family HPY04_RS05530 PF01312 FlhB HrpN YscU SpaS Family HPY04_RS05535 PF00691 OmpA family HPY04_RS05560 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS05570 PF00813 FliP family HPY04_RS05585 PF03958 Bacterial type II/III secretion system short domain HPY04_RS05585 PF00263 Bacterial type II and III secretion system protein HPY04_RS05590 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY04_RS05590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY04_RS05590 PF18269 T3SS EscN ATPase C-terminal domain HPY04_RS05635 PF03545 Yersinia virulence determinant (YopE) HPY04_RS05635 PF09020 YopE, N terminal HPY04_RS05650 PF13356 Arm DNA-binding domain HPY04_RS05650 PF00589 Phage integrase family HPY04_RS05660 PF00873 AcrB/AcrD/AcrF family HPY04_RS05665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY04_RS05675 PF02470 MlaD protein HPY04_RS05680 PF04403 Paraquat-inducible protein A HPY04_RS05685 PF05552 Conserved TM helix HPY04_RS05685 PF00924 Mechanosensitive ion channel HPY04_RS05705 PF00440 Bacterial regulatory proteins, tetR family HPY04_RS05705 PF08362 YcdC-like protein, C-terminal region HPY04_RS05710 PF00171 Aldehyde dehydrogenase family HPY04_RS05715 PF07383 Protein of unknown function (DUF1496) HPY04_RS05730 PF16295 Tetracyclin repressor-like, C-terminal domain HPY04_RS05730 PF00440 Bacterial regulatory proteins, tetR family HPY04_RS05735 PF02770 Acyl-CoA dehydrogenase, middle domain HPY04_RS05735 PF09317 Domain of unknown function (DUF1974) HPY04_RS05735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY04_RS05735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY04_RS05740 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY04_RS05740 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY04_RS05740 PF07055 Enoyl reductase FAD binding domain HPY04_RS05745 PF01176 Translation initiation factor 1A / IF-1 HPY04_RS05750 PF04377 Arginine-tRNA-protein transferase, C terminus HPY04_RS05750 PF04376 Arginine-tRNA-protein transferase, N terminus HPY04_RS05755 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HPY04_RS05760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY04_RS05765 PF10692 Protein of unknown function (DUF2498) HPY04_RS05770 PF01751 Toprim domain HPY04_RS05770 PF08272 Topoisomerase I zinc-ribbon-like HPY04_RS05770 PF01396 Topoisomerase DNA binding C4 zinc finger HPY04_RS05770 PF01131 DNA topoisomerase HPY04_RS05775 PF00483 Nucleotidyl transferase HPY04_RS05780 PF08323 Starch synthase catalytic domain HPY04_RS05780 PF00534 Glycosyl transferases group 1 HPY04_RS05800 PF04994 TfoX C-terminal domain HPY04_RS05800 PF04993 TfoX N-terminal domain HPY04_RS05805 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS05810 PF02613 Nitrate reductase delta subunit HPY04_RS05815 PF00072 Response regulator receiver domain HPY04_RS05815 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS05820 PF02698 DUF218 domain HPY04_RS05825 PF13847 Methyltransferase domain HPY04_RS05830 PF03882 MukF winged-helix domain HPY04_RS05830 PF17193 MukF C-terminal domain HPY04_RS05830 PF17192 MukF middle domain HPY04_RS05835 PF04288 MukE-like family HPY04_RS05840 PF16330 MukB hinge domain HPY04_RS05840 PF04310 MukB N-terminal HPY04_RS05845 PF00465 Iron-containing alcohol dehydrogenase HPY04_RS05850 PF06719 AraC-type transcriptional regulator N-terminus HPY04_RS05850 PF12833 Helix-turn-helix domain HPY04_RS05860 PF01037 Lrp/AsnC ligand binding domain HPY04_RS05865 PF01810 LysE type translocator HPY04_RS05870 PF08497 Radical SAM N-terminal HPY04_RS05870 PF11842 Domain of unknown function (DUF3362) HPY04_RS05870 PF04055 Radical SAM superfamily HPY04_RS05875 PF00563 EAL domain HPY04_RS05875 PF08447 PAS fold HPY04_RS05875 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS05875 PF08448 PAS fold HPY04_RS05880 PF00675 Insulinase (Peptidase family M16) HPY04_RS05880 PF05193 Peptidase M16 inactive domain HPY04_RS05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS05895 PF03466 LysR substrate binding domain HPY04_RS05900 PF01717 Cobalamin-independent synthase, Catalytic domain HPY04_RS05900 PF08267 Cobalamin-independent synthase, N-terminal domain HPY04_RS05910 PF03795 YCII-related domain HPY04_RS05915 PF03061 Thioesterase superfamily HPY04_RS05920 PF04279 Intracellular septation protein A HPY04_RS05930 PF02698 DUF218 domain HPY04_RS05935 PF01370 NAD dependent epimerase/dehydratase family HPY04_RS05945 PF01226 Formate/nitrite transporter HPY04_RS05950 PF06796 Periplasmic nitrate reductase protein NapE HPY04_RS05955 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY04_RS05960 PF00384 Molybdopterin oxidoreductase HPY04_RS05960 PF01568 Molydopterin dinucleotide binding domain HPY04_RS05960 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY04_RS05975 PF02833 DHHA2 domain HPY04_RS05975 PF01368 DHH family HPY04_RS05990 PF00005 ABC transporter HPY04_RS05995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS05995 PF00005 ABC transporter HPY04_RS06000 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS06000 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY04_RS06005 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS06010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY04_RS06015 PF02954 Bacterial regulatory protein, Fis family HPY04_RS06015 PF00158 Sigma-54 interaction domain HPY04_RS06020 PF04012 PspA/IM30 family HPY04_RS06035 PF00529 HlyD membrane-fusion protein of T1SS HPY04_RS06035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY04_RS06040 PF13533 Biotin-lipoyl like HPY04_RS06045 PF00873 AcrB/AcrD/AcrF family HPY04_RS06050 PF03352 Methyladenine glycosylase HPY04_RS06055 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY04_RS06060 PF13396 Phospholipase_D-nuclease N-terminal HPY04_RS06060 PF13091 PLD-like domain HPY04_RS06065 PF00209 Sodium:neurotransmitter symporter family HPY04_RS06070 PF00849 RNA pseudouridylate synthase HPY04_RS06075 PF01066 CDP-alcohol phosphatidyltransferase HPY04_RS06080 PF00005 ABC transporter HPY04_RS06085 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS06090 PF13416 Bacterial extracellular solute-binding protein HPY04_RS06100 PF06945 Protein of unknown function (DUF1289) HPY04_RS06115 PF00005 ABC transporter HPY04_RS06120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY04_RS06125 PF03222 Tryptophan/tyrosine permease family HPY04_RS06135 PF00571 CBS domain HPY04_RS06135 PF01769 Divalent cation transporter HPY04_RS06135 PF03448 MgtE intracellular N domain HPY04_RS06140 PF09308 LuxQ, periplasmic HPY04_RS06140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS06140 PF00072 Response regulator receiver domain HPY04_RS06140 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS06145 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS06145 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS06145 PF00563 EAL domain HPY04_RS06155 PF08453 Peptidase family M9 N-terminal HPY04_RS06155 PF04151 Bacterial pre-peptidase C-terminal domain HPY04_RS06155 PF01752 Collagenase HPY04_RS06165 PF12793 Sugar transport-related sRNA regulator N-term HPY04_RS06165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY04_RS06180 PF09009 Exotoxin A catalytic HPY04_RS06180 PF09102 Exotoxin A, targeting HPY04_RS06180 PF09101 Exotoxin A binding HPY04_RS06190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS06190 PF00672 HAMP domain HPY04_RS06190 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS06200 PF00563 EAL domain HPY04_RS06200 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS06200 PF00360 Phytochrome region HPY04_RS06200 PF01590 GAF domain HPY04_RS06205 PF01386 Ribosomal L25p family HPY04_RS06210 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS06210 PF00989 PAS fold HPY04_RS06210 PF11808 Phosphate regulon sensor protein PhoR HPY04_RS06215 PF00072 Response regulator receiver domain HPY04_RS06215 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS06225 PF00271 Helicase conserved C-terminal domain HPY04_RS06225 PF04851 Type III restriction enzyme, res subunit HPY04_RS06230 PF00849 RNA pseudouridylate synthase HPY04_RS06230 PF01479 S4 domain HPY04_RS06235 PF07690 Major Facilitator Superfamily HPY04_RS06245 PF13460 NAD(P)H-binding HPY04_RS06245 PF11066 Protein of unknown function (DUF2867) HPY04_RS06250 PF01554 MatE HPY04_RS06255 PF00005 ABC transporter HPY04_RS06270 PF06965 Na+/H+ antiporter 1 HPY04_RS06275 PF00202 Aminotransferase class-III HPY04_RS06280 PF16653 Saccharopine dehydrogenase C-terminal domain HPY04_RS06280 PF03435 Saccharopine dehydrogenase NADP binding domain HPY04_RS06290 PF05736 OprF membrane domain HPY04_RS06290 PF00691 OmpA family HPY04_RS06295 PF02321 Outer membrane efflux protein HPY04_RS06315 PF03466 LysR substrate binding domain HPY04_RS06315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS06325 PF01863 Protein of unknown function DUF45 HPY04_RS06330 PF05971 RNA methyltransferase HPY04_RS06345 PF04204 Homoserine O-succinyltransferase HPY04_RS06365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY04_RS06380 PF17203 Single cache domain 3 HPY04_RS06380 PF00989 PAS fold HPY04_RS06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS06380 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HPY04_RS06385 PF00072 Response regulator receiver domain HPY04_RS06385 PF12431 Transcriptional regulator HPY04_RS06395 PF00072 Response regulator receiver domain HPY04_RS06395 PF01584 CheW-like domain HPY04_RS06415 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS06415 PF00072 Response regulator receiver domain HPY04_RS06435 PF07690 Major Facilitator Superfamily HPY04_RS06440 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HPY04_RS06440 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HPY04_RS06445 PF00288 GHMP kinases N terminal domain HPY04_RS06445 PF08544 GHMP kinases C terminal HPY04_RS06445 PF10509 Galactokinase galactose-binding signature HPY04_RS06450 PF01263 Aldose 1-epimerase HPY04_RS06455 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS06460 PF00563 EAL domain HPY04_RS06460 PF17154 Gammaproteobacterial periplasmic sensor domain HPY04_RS06460 PF00672 HAMP domain HPY04_RS06460 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS06470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY04_RS06470 PF00205 Thiamine pyrophosphate enzyme, central domain HPY04_RS06470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY04_RS06475 PF03306 Alpha-acetolactate decarboxylase HPY04_RS06480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS06480 PF03466 LysR substrate binding domain HPY04_RS06490 PF00199 Catalase HPY04_RS06490 PF06628 Catalase-related immune-responsive HPY04_RS06500 PF00080 Copper/zinc superoxide dismutase (SODC) HPY04_RS06505 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HPY04_RS06510 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY04_RS06510 PF00361 Proton-conducting membrane transporter HPY04_RS06515 PF03466 LysR substrate binding domain HPY04_RS06515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS06520 PF00501 AMP-binding enzyme HPY04_RS06520 PF13193 AMP-binding enzyme C-terminal domain HPY04_RS06550 PF10415 Fumarase C C-terminus HPY04_RS06550 PF00206 Lyase HPY04_RS06560 PF01654 Cytochrome bd terminal oxidase subunit I HPY04_RS06565 PF02322 Cytochrome bd terminal oxidase subunit II HPY04_RS06570 PF02687 FtsX-like permease family HPY04_RS06570 PF00005 ABC transporter HPY04_RS06570 PF12704 MacB-like periplasmic core domain HPY04_RS06575 PF12704 MacB-like periplasmic core domain HPY04_RS06575 PF02687 FtsX-like permease family HPY04_RS06575 PF00005 ABC transporter HPY04_RS06580 PF12704 MacB-like periplasmic core domain HPY04_RS06580 PF02687 FtsX-like permease family HPY04_RS06580 PF00005 ABC transporter HPY04_RS06590 PF00529 HlyD membrane-fusion protein of T1SS HPY04_RS06600 PF00141 Peroxidase HPY04_RS06605 PF00232 Glycosyl hydrolase family 1 HPY04_RS06610 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS06615 PF01042 Endoribonuclease L-PSP HPY04_RS06620 PF04074 YhcH/YjgK/YiaL HPY04_RS06625 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY04_RS06630 PF00455 DeoR C terminal sensor domain HPY04_RS06630 PF08220 DeoR-like helix-turn-helix domain HPY04_RS06635 PF00005 ABC transporter HPY04_RS06635 PF17912 MalK OB fold domain HPY04_RS06640 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS06645 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS06650 PF13416 Bacterial extracellular solute-binding protein HPY04_RS06660 PF01618 MotA/TolQ/ExbB proton channel family HPY04_RS06665 PF01618 MotA/TolQ/ExbB proton channel family HPY04_RS06670 PF02472 Biopolymer transport protein ExbD/TolR HPY04_RS06675 PF03544 Gram-negative bacterial TonB protein C-terminal HPY04_RS06685 PF01068 ATP dependent DNA ligase domain HPY04_RS06685 PF14743 DNA ligase OB-like domain HPY04_RS06695 PF01554 MatE HPY04_RS06705 PF03881 Fructosamine kinase HPY04_RS06715 PF00877 NlpC/P60 family HPY04_RS06720 PF00672 HAMP domain HPY04_RS06720 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS06720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS06735 PF00480 ROK family HPY04_RS06745 PF03453 MoeA N-terminal region (domain I and II) HPY04_RS06745 PF00994 Probable molybdopterin binding domain HPY04_RS06745 PF03454 MoeA C-terminal region (domain IV) HPY04_RS06750 PF12804 MobA-like NTP transferase domain HPY04_RS06755 PF08402 TOBE domain HPY04_RS06755 PF00005 ABC transporter HPY04_RS06760 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS06765 PF12849 PBP superfamily domain HPY04_RS06770 PF00158 Sigma-54 interaction domain HPY04_RS06770 PF00072 Response regulator receiver domain HPY04_RS06770 PF02954 Bacterial regulatory protein, Fis family HPY04_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS06775 PF00989 PAS fold HPY04_RS06775 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS06780 PF12848 ABC transporter HPY04_RS06780 PF00005 ABC transporter HPY04_RS06785 PF02634 FdhD/NarQ family HPY04_RS06805 PF02613 Nitrate reductase delta subunit HPY04_RS06815 PF01568 Molydopterin dinucleotide binding domain HPY04_RS06815 PF00384 Molybdopterin oxidoreductase HPY04_RS06815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY04_RS06820 PF13247 4Fe-4S dicluster domain HPY04_RS06835 PF02146 Sir2 family HPY04_RS06840 PF04461 Protein of unknown function (DUF520) HPY04_RS06845 PF00793 DAHP synthetase I family HPY04_RS06860 PF17783 CvfB-like winged helix domain HPY04_RS06860 PF13509 S1 domain HPY04_RS06865 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HPY04_RS06865 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HPY04_RS06865 PF01189 16S rRNA methyltransferase RsmB/F HPY04_RS06870 PF02470 MlaD protein HPY04_RS06875 PF04403 Paraquat-inducible protein A HPY04_RS06880 PF00005 ABC transporter HPY04_RS06880 PF00664 ABC transporter transmembrane region HPY04_RS06885 PF13185 GAF domain HPY04_RS06890 PF17516 ProQ C-terminal domain HPY04_RS06890 PF04352 ProQ/FINO family HPY04_RS06895 PF00595 PDZ domain HPY04_RS06895 PF03572 Peptidase family S41 HPY04_RS06895 PF17804 Tail specific protease N-terminal domain HPY04_RS06895 PF11818 C-terminal domain of tail specific protease (DUF3340) HPY04_RS06905 PF01433 Peptidase family M1 domain HPY04_RS06905 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HPY04_RS06905 PF11940 Domain of unknown function (DUF3458) Ig-like fold HPY04_RS06915 PF05088 Bacterial NAD-glutamate dehydrogenase HPY04_RS06920 PF01180 Dihydroorotate dehydrogenase HPY04_RS06925 PF07126 Cell-division protein ZapC HPY04_RS06930 PF10672 S-adenosylmethionine-dependent methyltransferase HPY04_RS06930 PF02926 THUMP domain HPY04_RS06930 PF01170 Putative RNA methylase family UPF0020 HPY04_RS06950 PF04957 Ribosome modulation factor HPY04_RS06955 PF07977 FabA-like domain HPY04_RS06960 PF13654 AAA domain HPY04_RS06960 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY04_RS06965 PF17414 MatP C-terminal ribbon-helix-helix domain HPY04_RS06965 PF06303 MatP N-terminal domain HPY04_RS07060 PF07634 RtxA repeat HPY04_RS07060 PF11647 Membrane Localization Domain HPY04_RS07060 PF12146 Serine aminopeptidase, S33 HPY04_RS07060 PF11713 Peptidase C80 family HPY04_RS07060 PF16671 Actin cross-linking domain HPY04_RS07065 PF02794 RTX toxin acyltransferase family HPY04_RS07075 PF00005 ABC transporter HPY04_RS07075 PF00664 ABC transporter transmembrane region HPY04_RS07075 PF03412 Peptidase C39 family HPY04_RS07085 PF00664 ABC transporter transmembrane region HPY04_RS07085 PF00005 ABC transporter HPY04_RS07085 PF03412 Peptidase C39 family HPY04_RS07090 PF00072 Response regulator receiver domain HPY04_RS07090 PF09308 LuxQ, periplasmic HPY04_RS07090 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS07090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS07105 PF00115 Cytochrome C and Quinol oxidase polypeptide I HPY04_RS07120 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HPY04_RS07120 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY04_RS07130 PF00403 Heavy-metal-associated domain HPY04_RS07145 PF00027 Cyclic nucleotide-binding domain HPY04_RS07145 PF13545 Crp-like helix-turn-helix domain HPY04_RS07150 PF00582 Universal stress protein family HPY04_RS07155 PF01171 PP-loop family HPY04_RS07175 PF00005 ABC transporter HPY04_RS07175 PF08402 TOBE domain HPY04_RS07180 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS07185 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS07190 PF13416 Bacterial extracellular solute-binding protein HPY04_RS07195 PF13416 Bacterial extracellular solute-binding protein HPY04_RS07210 PF01235 Sodium:alanine symporter family HPY04_RS07215 PF01810 LysE type translocator HPY04_RS07260 PF16671 Actin cross-linking domain HPY04_RS07260 PF04717 Type VI secretion system, phage-baseplate injector HPY04_RS07265 PF05638 Type VI secretion system effector, Hcp HPY04_RS07270 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HPY04_RS07275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS07275 PF00672 HAMP domain HPY04_RS07275 PF02743 Cache domain HPY04_RS07280 PF07690 Major Facilitator Superfamily HPY04_RS07285 PF00529 HlyD membrane-fusion protein of T1SS HPY04_RS07285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY04_RS07290 PF02321 Outer membrane efflux protein HPY04_RS07305 PF00271 Helicase conserved C-terminal domain HPY04_RS07305 PF00270 DEAD/DEAH box helicase HPY04_RS07310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS07310 PF08447 PAS fold HPY04_RS07310 PF13426 PAS domain HPY04_RS07315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS07315 PF00672 HAMP domain HPY04_RS07315 PF02743 Cache domain HPY04_RS07325 PF17202 Single cache domain 3 HPY04_RS07325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS07325 PF00672 HAMP domain HPY04_RS07330 PF01584 CheW-like domain HPY04_RS07335 PF01339 CheB methylesterase HPY04_RS07335 PF00072 Response regulator receiver domain HPY04_RS07345 PF03705 CheR methyltransferase, all-alpha domain HPY04_RS07345 PF01739 CheR methyltransferase, SAM binding domain HPY04_RS07350 PF00072 Response regulator receiver domain HPY04_RS07350 PF01627 Hpt domain HPY04_RS07350 PF01584 CheW-like domain HPY04_RS07350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS07350 PF02895 Signal transducing histidine kinase, homodimeric domain HPY04_RS07355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS07355 PF01584 CheW-like domain HPY04_RS07355 PF02895 Signal transducing histidine kinase, homodimeric domain HPY04_RS07355 PF07194 P2 response regulator binding domain HPY04_RS07355 PF01627 Hpt domain HPY04_RS07365 PF00072 Response regulator receiver domain HPY04_RS07370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS07370 PF00672 HAMP domain HPY04_RS07375 PF00893 Small Multidrug Resistance protein HPY04_RS07380 PF00875 DNA photolyase HPY04_RS07380 PF03441 FAD binding domain of DNA photolyase HPY04_RS07385 PF07690 Major Facilitator Superfamily HPY04_RS07390 PF03466 LysR substrate binding domain HPY04_RS07390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS07400 PF01979 Amidohydrolase family HPY04_RS07405 PF10437 Bacterial lipoate protein ligase C-terminus HPY04_RS07405 PF03099 Biotin/lipoate A/B protein ligase family HPY04_RS07410 PF00012 Hsp70 protein HPY04_RS07420 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HPY04_RS07420 PF00271 Helicase conserved C-terminal domain HPY04_RS07420 PF00270 DEAD/DEAH box helicase HPY04_RS07420 PF11898 Domain of unknown function (DUF3418) HPY04_RS07420 PF04408 Helicase associated domain (HA2) HPY04_RS07440 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS07440 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS07440 PF00563 EAL domain HPY04_RS07450 PF00012 Hsp70 protein HPY04_RS07455 PF00012 Hsp70 protein HPY04_RS07460 PF17158 Membrane-associated sensor, integral membrane domain HPY04_RS07460 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS07470 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS07470 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS07470 PF00563 EAL domain HPY04_RS07490 PF06508 Queuosine biosynthesis protein QueC HPY04_RS07495 PF04055 Radical SAM superfamily HPY04_RS07505 PF14824 Sirohaem biosynthesis protein central HPY04_RS07505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY04_RS07505 PF10414 Sirohaem synthase dimerisation region HPY04_RS07510 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY04_RS07515 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS07520 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS07525 PF00005 ABC transporter HPY04_RS07530 PF01027 Inhibitor of apoptosis-promoting Bax1 HPY04_RS07535 PF04358 DsrC like protein HPY04_RS07540 PF00708 Acylphosphatase HPY04_RS07545 PF10672 S-adenosylmethionine-dependent methyltransferase HPY04_RS07545 PF17785 PUA-like domain HPY04_RS07550 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS07555 PF00462 Glutaredoxin HPY04_RS07555 PF08534 Redoxin HPY04_RS07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS07560 PF00672 HAMP domain HPY04_RS07560 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS07560 PF01627 Hpt domain HPY04_RS07560 PF00072 Response regulator receiver domain HPY04_RS07560 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY04_RS07565 PF00072 Response regulator receiver domain HPY04_RS07570 PF14497 Glutathione S-transferase, C-terminal domain HPY04_RS07570 PF02798 Glutathione S-transferase, N-terminal domain HPY04_RS07580 PF04209 homogentisate 1,2-dioxygenase HPY04_RS07585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY04_RS07590 PF07687 Peptidase dimerisation domain HPY04_RS07590 PF01546 Peptidase family M20/M25/M40 HPY04_RS07605 PF13006 Insertion element 4 transposase N-terminal HPY04_RS07605 PF01609 Transposase DDE domain HPY04_RS07610 PF00501 AMP-binding enzyme HPY04_RS07610 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY04_RS07610 PF13193 AMP-binding enzyme C-terminal domain HPY04_RS07615 PF04303 PrpF protein HPY04_RS07620 PF00330 Aconitase family (aconitate hydratase) HPY04_RS07620 PF00694 Aconitase C-terminal domain HPY04_RS07625 PF00285 Citrate synthase, C-terminal domain HPY04_RS07635 PF07729 FCD domain HPY04_RS07635 PF00392 Bacterial regulatory proteins, gntR family HPY04_RS07650 PF01970 Tripartite tricarboxylate transporter TctA family HPY04_RS07665 PF02653 Branched-chain amino acid transport system / permease component HPY04_RS07670 PF00005 ABC transporter HPY04_RS07675 PF13407 Periplasmic binding protein domain HPY04_RS07695 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS07695 PF00072 Response regulator receiver domain HPY04_RS07700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS07700 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS07700 PF00672 HAMP domain HPY04_RS07705 PF06629 MltA-interacting protein MipA HPY04_RS07710 PF04393 Protein of unknown function (DUF535) HPY04_RS07715 PF00072 Response regulator receiver domain HPY04_RS07715 PF02954 Bacterial regulatory protein, Fis family HPY04_RS07715 PF00158 Sigma-54 interaction domain HPY04_RS07720 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS07720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS07720 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY04_RS07725 PF00939 Sodium:sulfate symporter transmembrane region HPY04_RS07730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS07730 PF00672 HAMP domain HPY04_RS07735 PF01168 Alanine racemase, N-terminal domain HPY04_RS07735 PF00842 Alanine racemase, C-terminal domain HPY04_RS07740 PF00892 EamA-like transporter family HPY04_RS07750 PF13302 Acetyltransferase (GNAT) domain HPY04_RS07755 PF18024 Helix-turn-helix domain HPY04_RS07755 PF00158 Sigma-54 interaction domain HPY04_RS07760 PF05128 Domain of unknown function (DUF697) HPY04_RS07765 PF04317 YcjX-like family, DUF463 HPY04_RS07780 PF04715 Anthranilate synthase component I, N terminal region HPY04_RS07780 PF00425 chorismate binding enzyme HPY04_RS07785 PF00293 NUDIX domain HPY04_RS07790 PF03222 Tryptophan/tyrosine permease family HPY04_RS07795 PF03315 Serine dehydratase beta chain HPY04_RS07795 PF03313 Serine dehydratase alpha chain HPY04_RS07800 PF01242 6-pyruvoyl tetrahydropterin synthase HPY04_RS07805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS07805 PF00672 HAMP domain HPY04_RS07805 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS07810 PF00152 tRNA synthetases class II (D, K and N) HPY04_RS07810 PF01336 OB-fold nucleic acid binding domain HPY04_RS07815 PF08543 Phosphomethylpyrimidine kinase HPY04_RS07820 PF00672 HAMP domain HPY04_RS07820 PF01966 HD domain HPY04_RS07825 PF00155 Aminotransferase class I and II HPY04_RS07840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS07840 PF17200 Single Cache domain 2 HPY04_RS07840 PF00672 HAMP domain HPY04_RS07845 PF04349 Periplasmic glucan biosynthesis protein, MdoG HPY04_RS07850 PF13506 Glycosyl transferase family 21 HPY04_RS07855 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS07860 PF04794 YdjC-like protein HPY04_RS07865 PF02056 Family 4 glycosyl hydrolase HPY04_RS07865 PF11975 Family 4 glycosyl hydrolase C-terminal domain HPY04_RS07870 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit HPY04_RS07875 PF02378 Phosphotransferase system, EIIC HPY04_RS07880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY04_RS07885 PF01522 Polysaccharide deacetylase HPY04_RS07890 PF02028 BCCT, betaine/carnitine/choline family transporter HPY04_RS07895 PF01047 MarR family HPY04_RS07900 PF00072 Response regulator receiver domain HPY04_RS07900 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS07905 PF17200 Single Cache domain 2 HPY04_RS07905 PF07730 Histidine kinase HPY04_RS07910 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY04_RS07920 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY04_RS07935 PF00753 Metallo-beta-lactamase superfamily HPY04_RS07940 PF05951 Bacterial protein of unknown function (DUF882) HPY04_RS07970 PF00925 GTP cyclohydrolase II HPY04_RS07980 PF07690 Major Facilitator Superfamily HPY04_RS07995 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY04_RS07995 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY04_RS08005 PF03477 ATP cone domain HPY04_RS08005 PF02867 Ribonucleotide reductase, barrel domain HPY04_RS08005 PF00317 Ribonucleotide reductase, all-alpha domain HPY04_RS08010 PF00268 Ribonucleotide reductase, small chain HPY04_RS08015 PF00175 Oxidoreductase NAD-binding domain HPY04_RS08015 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY04_RS08015 PF00970 Oxidoreductase FAD-binding domain HPY04_RS08025 PF00994 Probable molybdopterin binding domain HPY04_RS08040 PF00672 HAMP domain HPY04_RS08040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS08040 PF17200 Single Cache domain 2 HPY04_RS08055 PF00005 ABC transporter HPY04_RS08060 PF01032 FecCD transport family HPY04_RS08065 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HPY04_RS08075 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HPY04_RS08080 PF02654 Cobalamin-5-phosphate synthase HPY04_RS08085 PF02277 Phosphoribosyltransferase HPY04_RS08090 PF01641 SelR domain HPY04_RS08100 PF08411 Exonuclease C-terminal HPY04_RS08100 PF00929 Exonuclease HPY04_RS08105 PF03788 LrgA family HPY04_RS08110 PF04172 LrgB-like family HPY04_RS08115 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HPY04_RS08115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY04_RS08125 PF02222 ATP-grasp domain HPY04_RS08130 PF05724 Thiopurine S-methyltransferase (TPMT) HPY04_RS08140 PF00216 Bacterial DNA-binding protein HPY04_RS08145 PF03483 B3/4 domain HPY04_RS08145 PF01588 Putative tRNA binding domain HPY04_RS08145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HPY04_RS08145 PF03484 tRNA synthetase B5 domain HPY04_RS08145 PF03147 Ferredoxin-fold anticodon binding domain HPY04_RS08150 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HPY04_RS08150 PF01409 tRNA synthetases class II core domain (F) HPY04_RS08160 PF00072 Response regulator receiver domain HPY04_RS08160 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS08185 PF01066 CDP-alcohol phosphatidyltransferase HPY04_RS08190 PF02151 UvrB/uvrC motif HPY04_RS08190 PF08459 UvrC Helix-hairpin-helix N-terminal HPY04_RS08190 PF01541 GIY-YIG catalytic domain HPY04_RS08195 PF00072 Response regulator receiver domain HPY04_RS08195 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS08200 PF00136 DNA polymerase family B HPY04_RS08200 PF03104 DNA polymerase family B, exonuclease domain HPY04_RS08205 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS08205 PF13426 PAS domain HPY04_RS08205 PF00563 EAL domain HPY04_RS08215 PF09285 Elongation factor P, C-terminal HPY04_RS08215 PF08207 Elongation factor P (EF-P) KOW-like domain HPY04_RS08215 PF01132 Elongation factor P (EF-P) OB domain HPY04_RS08220 PF04269 Protein of unknown function, DUF440 HPY04_RS08230 PF00392 Bacterial regulatory proteins, gntR family HPY04_RS08230 PF07702 UTRA domain HPY04_RS08235 PF01979 Amidohydrolase family HPY04_RS08240 PF00491 Arginase family HPY04_RS08245 PF01175 Urocanase Rossmann-like domain HPY04_RS08245 PF17392 Urocanase C-terminal domain HPY04_RS08245 PF17391 Urocanase N-terminal domain HPY04_RS08250 PF00221 Aromatic amino acid lyase HPY04_RS08265 PF04191 Phospholipid methyltransferase HPY04_RS08270 PF02913 FAD linked oxidases, C-terminal domain HPY04_RS08270 PF01565 FAD binding domain HPY04_RS08270 PF13183 4Fe-4S dicluster domain HPY04_RS08285 PF00691 OmpA family HPY04_RS08285 PF13488 Glycine zipper HPY04_RS08305 PF01259 SAICAR synthetase HPY04_RS08315 PF03949 Malic enzyme, NAD binding domain HPY04_RS08315 PF00390 Malic enzyme, N-terminal domain HPY04_RS08325 PF02698 DUF218 domain HPY04_RS08330 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS08330 PF08448 PAS fold HPY04_RS08335 PF00266 Aminotransferase class-V HPY04_RS08345 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS08350 PF00664 ABC transporter transmembrane region HPY04_RS08350 PF00005 ABC transporter HPY04_RS08355 PF00005 ABC transporter HPY04_RS08355 PF00664 ABC transporter transmembrane region HPY04_RS08360 PF01479 S4 domain HPY04_RS08360 PF00849 RNA pseudouridylate synthase HPY04_RS08365 PF01300 Telomere recombination HPY04_RS08370 PF02811 PHP domain HPY04_RS08375 PF08056 Tryptophan operon leader peptide HPY04_RS08380 PF04715 Anthranilate synthase component I, N terminal region HPY04_RS08380 PF00425 chorismate binding enzyme HPY04_RS08385 PF00117 Glutamine amidotransferase class-I HPY04_RS08390 PF02885 Glycosyl transferase family, helical bundle domain HPY04_RS08390 PF00591 Glycosyl transferase family, a/b domain HPY04_RS08395 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HPY04_RS08395 PF00218 Indole-3-glycerol phosphate synthase HPY04_RS08400 PF00291 Pyridoxal-phosphate dependent enzyme HPY04_RS08405 PF00290 Tryptophan synthase alpha chain HPY04_RS08410 PF00375 Sodium:dicarboxylate symporter family HPY04_RS08415 PF00265 Thymidine kinase HPY04_RS08420 PF00152 tRNA synthetases class II (D, K and N) HPY04_RS08420 PF02938 GAD domain HPY04_RS08420 PF01336 OB-fold nucleic acid binding domain HPY04_RS08425 PF01904 Protein of unknown function DUF72 HPY04_RS08430 PF13649 Methyltransferase domain HPY04_RS08435 PF08003 Protein of unknown function (DUF1698) HPY04_RS08440 PF18030 RimK PreATP-grasp domain HPY04_RS08440 PF08443 RimK-like ATP-grasp domain HPY04_RS08455 PF00266 Aminotransferase class-V HPY04_RS08465 PF00989 PAS fold HPY04_RS08465 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS08480 PF04993 TfoX N-terminal domain HPY04_RS08480 PF04994 TfoX C-terminal domain HPY04_RS08490 PF03956 Lysine exporter LysO HPY04_RS08500 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY04_RS08505 PF01380 SIS domain HPY04_RS08505 PF01418 Helix-turn-helix domain, rpiR family HPY04_RS08510 PF00171 Aldehyde dehydrogenase family HPY04_RS08510 PF00465 Iron-containing alcohol dehydrogenase HPY04_RS08515 PF00462 Glutaredoxin HPY04_RS08520 PF02080 TrkA-C domain HPY04_RS08520 PF06826 Predicted Permease Membrane Region HPY04_RS08525 PF07724 AAA domain (Cdc48 subfamily) HPY04_RS08525 PF17871 AAA lid domain HPY04_RS08525 PF00004 ATPase family associated with various cellular activities (AAA) HPY04_RS08525 PF02861 Clp amino terminal domain, pathogenicity island component HPY04_RS08525 PF10431 C-terminal, D2-small domain, of ClpB protein HPY04_RS08530 PF02617 ATP-dependent Clp protease adaptor protein ClpS HPY04_RS08535 PF00313 'Cold-shock' DNA-binding domain HPY04_RS08540 PF03971 Monomeric isocitrate dehydrogenase HPY04_RS08545 PF00849 RNA pseudouridylate synthase HPY04_RS08550 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HPY04_RS08550 PF01502 Phosphoribosyl-AMP cyclohydrolase HPY04_RS08555 PF00977 Histidine biosynthesis protein HPY04_RS08560 PF00977 Histidine biosynthesis protein HPY04_RS08565 PF00117 Glutamine amidotransferase class-I HPY04_RS08570 PF08645 Polynucleotide kinase 3 phosphatase HPY04_RS08570 PF00475 Imidazoleglycerol-phosphate dehydratase HPY04_RS08575 PF00155 Aminotransferase class I and II HPY04_RS08580 PF00815 Histidinol dehydrogenase HPY04_RS08585 PF01634 ATP phosphoribosyltransferase HPY04_RS08585 PF08029 HisG, C-terminal domain HPY04_RS08590 PF03553 Na+/H+ antiporter family HPY04_RS08595 PF00816 H-NS histone family HPY04_RS08600 PF00294 pfkB family carbohydrate kinase HPY04_RS08610 PF04356 Protein of unknown function (DUF489) HPY04_RS08615 PF08328 Adenylosuccinate lyase C-terminal HPY04_RS08615 PF00206 Lyase HPY04_RS08625 PF16036 Chalcone isomerase-like HPY04_RS08650 PF00106 short chain dehydrogenase HPY04_RS08660 PF01435 Peptidase family M48 HPY04_RS08675 PF08241 Methyltransferase domain HPY04_RS08680 PF00155 Aminotransferase class I and II HPY04_RS08685 PF04055 Radical SAM superfamily HPY04_RS08685 PF06968 Biotin and Thiamin Synthesis associated domain HPY04_RS08690 PF00202 Aminotransferase class-III HPY04_RS08695 PF02403 Seryl-tRNA synthetase N-terminal domain HPY04_RS08695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY04_RS08700 PF16193 AAA C-terminal domain HPY04_RS08700 PF00004 ATPase family associated with various cellular activities (AAA) HPY04_RS08700 PF12002 MgsA AAA+ ATPase C terminal HPY04_RS08705 PF03548 Outer membrane lipoprotein carrier protein LolA HPY04_RS08710 PF02810 SEC-C motif HPY04_RS08710 PF01043 SecA preprotein cross-linking domain HPY04_RS08710 PF07516 SecA Wing and Scaffold domain HPY04_RS08710 PF07517 SecA DEAD-like domain HPY04_RS08715 PF01207 Dihydrouridine synthase (Dus) HPY04_RS08720 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS08725 PF00005 ABC transporter HPY04_RS08730 PF02653 Branched-chain amino acid transport system / permease component HPY04_RS08740 PF09905 DNA-binding protein VF530 HPY04_RS08745 PF04217 Protein of unknown function, DUF412 HPY04_RS08750 PF00871 Acetokinase family HPY04_RS08755 PF01515 Phosphate acetyl/butaryl transferase HPY04_RS08755 PF07085 DRTGG domain HPY04_RS08760 PF13409 Glutathione S-transferase, N-terminal domain HPY04_RS08765 PF00005 ABC transporter HPY04_RS08765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS08770 PF00005 ABC transporter HPY04_RS08770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS08775 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS08775 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY04_RS08780 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS08785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY04_RS08795 PF08448 PAS fold HPY04_RS08795 PF13188 PAS domain HPY04_RS08795 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS08795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS08795 PF00072 Response regulator receiver domain HPY04_RS08800 PF00072 Response regulator receiver domain HPY04_RS08800 PF00158 Sigma-54 interaction domain HPY04_RS08800 PF02954 Bacterial regulatory protein, Fis family HPY04_RS08805 PF13188 PAS domain HPY04_RS08805 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS08805 PF00563 EAL domain HPY04_RS08805 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS08810 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS08810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS08815 PF00989 PAS fold HPY04_RS08815 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS08815 PF13426 PAS domain HPY04_RS08815 PF13188 PAS domain HPY04_RS08825 PF00072 Response regulator receiver domain HPY04_RS08840 PF01300 Telomere recombination HPY04_RS08840 PF03481 Putative GTP-binding controlling metal-binding HPY04_RS08855 PF01161 Phosphatidylethanolamine-binding protein HPY04_RS08865 PF00704 Glycosyl hydrolases family 18 HPY04_RS08865 PF06483 Chitinase C HPY04_RS08880 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY04_RS08880 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY04_RS08885 PF01022 Bacterial regulatory protein, arsR family HPY04_RS08895 PF00583 Acetyltransferase (GNAT) family HPY04_RS08900 PF02321 Outer membrane efflux protein HPY04_RS08905 PF00873 AcrB/AcrD/AcrF family HPY04_RS08910 PF00529 HlyD membrane-fusion protein of T1SS HPY04_RS08910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY04_RS08915 PF00072 Response regulator receiver domain HPY04_RS08915 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS08920 PF16736 Single Cache-like HPY04_RS08920 PF00989 PAS fold HPY04_RS08920 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS08920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS08930 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS08930 PF08448 PAS fold HPY04_RS08940 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY04_RS08955 PF01037 Lrp/AsnC ligand binding domain HPY04_RS08955 PF13404 AsnC-type helix-turn-helix domain HPY04_RS08960 PF00291 Pyridoxal-phosphate dependent enzyme HPY04_RS08965 PF08496 Peptidase family S49 N-terminal HPY04_RS08965 PF01343 Peptidase family S49 HPY04_RS08970 PF00106 short chain dehydrogenase HPY04_RS08975 PF03692 Putative zinc- or iron-chelating domain HPY04_RS08980 PF03692 Putative zinc- or iron-chelating domain HPY04_RS08985 PF02132 RecR protein HPY04_RS08985 PF13662 Toprim domain HPY04_RS08990 PF02575 YbaB/EbfC DNA-binding family HPY04_RS08995 PF12170 DNA polymerase III tau subunit V interacting with alpha HPY04_RS08995 PF12169 DNA polymerase III subunits gamma and tau domain III HPY04_RS08995 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HPY04_RS09000 PF00156 Phosphoribosyl transferase domain HPY04_RS09005 PF04304 Protein of unknown function (DUF454) HPY04_RS09010 PF00072 Response regulator receiver domain HPY04_RS09015 PF03466 LysR substrate binding domain HPY04_RS09015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS09020 PF00881 Nitroreductase family HPY04_RS09025 PF00378 Enoyl-CoA hydratase/isomerase HPY04_RS09025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY04_RS09025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY04_RS09030 PF00108 Thiolase, N-terminal domain HPY04_RS09030 PF02803 Thiolase, C-terminal domain HPY04_RS09035 PF04542 Sigma-70 region 2 HPY04_RS09035 PF08281 Sigma-70, region 4 HPY04_RS09045 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY04_RS09050 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY04_RS09055 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY04_RS09060 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HPY04_RS09060 PF12557 Cob(I)alamin adenosyltransferase N terminal HPY04_RS09065 PF05170 AsmA family HPY04_RS09070 PF00485 Phosphoribulokinase / Uridine kinase family HPY04_RS09075 PF10609 NUBPL iron-transfer P-loop NTPase HPY04_RS09080 PF09334 tRNA synthetases class I (M) HPY04_RS09080 PF01588 Putative tRNA binding domain HPY04_RS09090 PF01048 Phosphorylase superfamily HPY04_RS09095 PF00403 Heavy-metal-associated domain HPY04_RS09100 PF01743 Poly A polymerase head domain HPY04_RS09100 PF00571 CBS domain HPY04_RS09105 PF07694 5TMR of 5TMR-LYT HPY04_RS09105 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS09110 PF02391 MoaE protein HPY04_RS09115 PF02597 ThiS family HPY04_RS09120 PF01967 MoaC family HPY04_RS09125 PF00994 Probable molybdopterin binding domain HPY04_RS09130 PF06463 Molybdenum Cofactor Synthesis C HPY04_RS09130 PF04055 Radical SAM superfamily HPY04_RS09135 PF01933 Uncharacterised protein family UPF0052 HPY04_RS09140 PF01627 Hpt domain HPY04_RS09145 PF00072 Response regulator receiver domain HPY04_RS09145 PF00158 Sigma-54 interaction domain HPY04_RS09145 PF02954 Bacterial regulatory protein, Fis family HPY04_RS09150 PF17757 UvrB interaction domain HPY04_RS09150 PF12344 Ultra-violet resistance protein B HPY04_RS09150 PF02151 UvrB/uvrC motif HPY04_RS09150 PF04851 Type III restriction enzyme, res subunit HPY04_RS09150 PF00271 Helicase conserved C-terminal domain HPY04_RS09160 PF02508 Rnf-Nqr subunit, membrane protein HPY04_RS09165 PF04060 Putative Fe-S cluster HPY04_RS09170 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HPY04_RS09170 PF12838 4Fe-4S dicluster domain HPY04_RS09170 PF10531 SLBB domain HPY04_RS09170 PF13375 RnfC Barrel sandwich hybrid domain HPY04_RS09175 PF03116 NQR2, RnfD, RnfE family HPY04_RS09180 PF04205 FMN-binding domain HPY04_RS09185 PF02508 Rnf-Nqr subunit, membrane protein HPY04_RS09190 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY04_RS09190 PF00633 Helix-hairpin-helix motif HPY04_RS09190 PF10576 Iron-sulfur binding domain of endonuclease III HPY04_RS09195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY04_RS09200 PF10952 Protein of unknown function (DUF2753) HPY04_RS09205 PF18393 MotY N-terminal domain HPY04_RS09205 PF00691 OmpA family HPY04_RS09210 PF00929 Exonuclease HPY04_RS09215 PF03553 Na+/H+ antiporter family HPY04_RS09215 PF13726 Na+-H+ antiporter family HPY04_RS09220 PF00156 Phosphoribosyl transferase domain HPY04_RS09225 PF02674 Colicin V production protein HPY04_RS09230 PF05036 Sporulation related domain HPY04_RS09235 PF02875 Mur ligase family, glutamate ligase domain HPY04_RS09235 PF08245 Mur ligase middle domain HPY04_RS09240 PF17848 Acetyl-coA carboxylase zinc finger domain HPY04_RS09240 PF01039 Carboxyl transferase domain HPY04_RS09245 PF01416 tRNA pseudouridine synthase HPY04_RS09255 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HPY04_RS09255 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY04_RS09260 PF00367 phosphotransferase system, EIIB HPY04_RS09260 PF02378 Phosphotransferase system, EIIC HPY04_RS09260 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY04_RS09265 PF01979 Amidohydrolase family HPY04_RS09270 PF01047 MarR family HPY04_RS09270 PF00480 ROK family HPY04_RS09275 PF02254 TrkA-N domain HPY04_RS09275 PF00999 Sodium/hydrogen exchanger family HPY04_RS09280 PF00733 Asparagine synthase HPY04_RS09280 PF13537 Glutamine amidotransferase domain HPY04_RS09285 PF02357 Transcription termination factor nusG HPY04_RS09290 PF00854 POT family HPY04_RS09295 PF00762 Ferrochelatase HPY04_RS09300 PF05191 Adenylate kinase, active site lid HPY04_RS09305 PF00183 Hsp90 protein HPY04_RS09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS09310 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS09315 PF17323 Trans-membrane regulatory protein ToxS HPY04_RS09325 PF12850 Calcineurin-like phosphoesterase superfamily domain HPY04_RS09330 PF08338 Domain of unknown function (DUF1731) HPY04_RS09330 PF01370 NAD dependent epimerase/dehydratase family HPY04_RS09335 PF00106 short chain dehydrogenase HPY04_RS09340 PF00085 Thioredoxin HPY04_RS09345 PF01145 SPFH domain / Band 7 family HPY04_RS09345 PF16200 C-terminal region of band_7 HPY04_RS09350 PF01957 NfeD-like C-terminal, partner-binding HPY04_RS09355 PF13411 MerR HTH family regulatory protein HPY04_RS09360 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY04_RS09365 PF13609 Gram-negative porin HPY04_RS09370 PF12826 Helix-hairpin-helix motif HPY04_RS09370 PF03120 NAD-dependent DNA ligase OB-fold domain HPY04_RS09370 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HPY04_RS09370 PF01653 NAD-dependent DNA ligase adenylation domain HPY04_RS09370 PF00533 BRCA1 C Terminus (BRCT) domain HPY04_RS09375 PF04354 ZipA, C-terminal FtsZ-binding domain HPY04_RS09385 PF00291 Pyridoxal-phosphate dependent enzyme HPY04_RS09390 PF00381 PTS HPr component phosphorylation site HPY04_RS09395 PF02896 PEP-utilising enzyme, TIM barrel domain HPY04_RS09395 PF05524 PEP-utilising enzyme, N-terminal HPY04_RS09395 PF00391 PEP-utilising enzyme, mobile domain HPY04_RS09400 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY04_RS09405 PF01494 FAD binding domain HPY04_RS09410 PF00919 Uncharacterized protein family UPF0004 HPY04_RS09410 PF04055 Radical SAM superfamily HPY04_RS09410 PF01938 TRAM domain HPY04_RS09415 PF02562 PhoH-like protein HPY04_RS09420 PF02130 Uncharacterized protein family UPF0054 HPY04_RS09425 PF00571 CBS domain HPY04_RS09425 PF03471 Transporter associated domain HPY04_RS09430 PF00795 Carbon-nitrogen hydrolase HPY04_RS09435 PF07295 Zinc-ribbon containing domain HPY04_RS09440 PF13603 Leucyl-tRNA synthetase, Domain 2 HPY04_RS09440 PF00133 tRNA synthetases class I (I, L, M and V) HPY04_RS09440 PF08264 Anticodon-binding domain of tRNA HPY04_RS09445 PF04390 Lipopolysaccharide-assembly HPY04_RS09450 PF06144 DNA polymerase III, delta subunit HPY04_RS09450 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HPY04_RS09460 PF02590 Predicted SPOUT methyltransferase HPY04_RS09465 PF03717 Penicillin-binding Protein dimerisation domain HPY04_RS09465 PF00905 Penicillin binding protein transpeptidase domain HPY04_RS09470 PF01098 Cell cycle protein HPY04_RS09475 PF03330 Lytic transglycolase HPY04_RS09475 PF05036 Sporulation related domain HPY04_RS09480 PF07943 Penicillin-binding protein 5, C-terminal domain HPY04_RS09480 PF00768 D-alanyl-D-alanine carboxypeptidase HPY04_RS09485 PF04359 Protein of unknown function (DUF493) HPY04_RS09490 PF03099 Biotin/lipoate A/B protein ligase family HPY04_RS09495 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HPY04_RS09495 PF04055 Radical SAM superfamily HPY04_RS09505 PF00464 Serine hydroxymethyltransferase HPY04_RS09525 PF02706 Chain length determinant protein HPY04_RS09525 PF13807 G-rich domain on putative tyrosine kinase HPY04_RS09525 PF13614 AAA domain HPY04_RS09530 PF10531 SLBB domain HPY04_RS09530 PF02563 Polysaccharide biosynthesis/export protein HPY04_RS09530 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HPY04_RS09540 PF02397 Bacterial sugar transferase HPY04_RS09555 PF12561 ToxR activated gene A lipoprotein domain HPY04_RS09555 PF17945 Beta/Gamma crystallin HPY04_RS09570 PF03808 Glycosyl transferase WecB/TagA/CpsF family HPY04_RS09580 PF00862 Sucrose synthase HPY04_RS09580 PF00534 Glycosyl transferases group 1 HPY04_RS09590 PF00534 Glycosyl transferases group 1 HPY04_RS09590 PF13439 Glycosyltransferase Family 4 HPY04_RS09610 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPY04_RS09610 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY04_RS09610 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY04_RS09615 PF02350 UDP-N-acetylglucosamine 2-epimerase HPY04_RS09620 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY04_RS09625 PF00873 AcrB/AcrD/AcrF family HPY04_RS09630 PF13533 Biotin-lipoyl like HPY04_RS09655 PF00128 Alpha amylase, catalytic domain HPY04_RS09655 PF16657 Maltogenic Amylase, C-terminal domain HPY04_RS09660 PF00367 phosphotransferase system, EIIB HPY04_RS09660 PF02378 Phosphotransferase system, EIIC HPY04_RS09665 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS09675 PF00005 ABC transporter HPY04_RS09675 PF09383 NIL domain HPY04_RS09680 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS09685 PF03180 NLPA lipoprotein HPY04_RS09690 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HPY04_RS09695 PF07348 Syd protein (SUKH-2) HPY04_RS09700 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HPY04_RS09700 PF14489 QueF-like protein HPY04_RS09710 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS09715 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HPY04_RS09715 PF03641 Possible lysine decarboxylase HPY04_RS09715 PF11892 Domain of unknown function (DUF3412) HPY04_RS09720 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY04_RS09720 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY04_RS09725 PF04241 Protein of unknown function (DUF423) HPY04_RS09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS09730 PF03466 LysR substrate binding domain HPY04_RS09735 PF02926 THUMP domain HPY04_RS09735 PF02568 Thiamine biosynthesis protein (ThiI) HPY04_RS09740 PF13677 Membrane MotB of proton-channel complex MotA/MotB HPY04_RS09740 PF00691 OmpA family HPY04_RS09745 PF01618 MotA/TolQ/ExbB proton channel family HPY04_RS09750 PF02609 Exonuclease VII small subunit HPY04_RS09755 PF00348 Polyprenyl synthetase HPY04_RS09760 PF02780 Transketolase, C-terminal domain HPY04_RS09760 PF02779 Transketolase, pyrimidine binding domain HPY04_RS09760 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HPY04_RS09765 PF00849 RNA pseudouridylate synthase HPY04_RS09770 PF04287 tRNA pseudouridine synthase C HPY04_RS09785 PF13302 Acetyltransferase (GNAT) domain HPY04_RS09795 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HPY04_RS09800 PF03806 AbgT putative transporter family HPY04_RS09805 PF00444 Ribosomal protein L36 HPY04_RS09810 PF01197 Ribosomal protein L31 HPY04_RS09815 PF18389 TrmO C-terminal domain HPY04_RS09815 PF01980 tRNA-methyltransferase O HPY04_RS09820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY04_RS09820 PF03129 Anticodon binding domain HPY04_RS09820 PF04073 Aminoacyl-tRNA editing domain HPY04_RS09825 PF01797 Transposase IS200 like HPY04_RS09835 PF06786 Uncharacterised protein family (UPF0253) HPY04_RS09845 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HPY04_RS09845 PF02769 AIR synthase related protein, C-terminal domain HPY04_RS09845 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HPY04_RS09850 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY04_RS09850 PF01464 Transglycosylase SLT domain HPY04_RS09855 PF14437 MafB19-like deaminase HPY04_RS09860 PF03806 AbgT putative transporter family HPY04_RS09885 PF00114 Pilin (bacterial filament) HPY04_RS09885 PF07963 Prokaryotic N-terminal methylation motif HPY04_RS09890 PF00226 DnaJ domain HPY04_RS09890 PF00684 DnaJ central domain HPY04_RS09890 PF01556 DnaJ C terminal domain HPY04_RS09895 PF00012 Hsp70 protein HPY04_RS09900 PF01025 GrpE HPY04_RS09905 PF01513 ATP-NAD kinase HPY04_RS09910 PF02463 RecF/RecN/SMC N terminal domain HPY04_RS09915 PF04355 SmpA / OmlA family HPY04_RS09920 PF03658 RnfH family Ubiquitin HPY04_RS09925 PF03364 Polyketide cyclase / dehydrase and lipid transport HPY04_RS09930 PF01668 SmpB protein HPY04_RS09940 PF13356 Arm DNA-binding domain HPY04_RS09940 PF00589 Phage integrase family HPY04_RS09960 PF04851 Type III restriction enzyme, res subunit HPY04_RS09960 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HPY04_RS09960 PF00271 Helicase conserved C-terminal domain HPY04_RS09960 PF08463 EcoEI R protein C-terminal HPY04_RS09965 PF01555 DNA methylase HPY04_RS09980 PF12161 HsdM N-terminal domain HPY04_RS09980 PF02384 N-6 DNA Methylase HPY04_RS09985 PF01420 Type I restriction modification DNA specificity domain HPY04_RS10000 PF00239 Resolvase, N terminal domain HPY04_RS10000 PF02796 Helix-turn-helix domain of resolvase HPY04_RS10020 PF12833 Helix-turn-helix domain HPY04_RS10020 PF02311 AraC-like ligand binding domain HPY04_RS10025 PF13438 Domain of unknown function (DUF4113) HPY04_RS10025 PF11799 impB/mucB/samB family C-terminal domain HPY04_RS10025 PF11798 IMS family HHH motif HPY04_RS10025 PF00817 impB/mucB/samB family HPY04_RS10030 PF00717 Peptidase S24-like HPY04_RS10095 PF00037 4Fe-4S binding domain HPY04_RS10095 PF11953 Domain of unknown function (DUF3470) HPY04_RS10100 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY04_RS10100 PF00588 SpoU rRNA Methylase family HPY04_RS10110 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HPY04_RS10115 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HPY04_RS10120 PF04223 Citrate lyase, alpha subunit (CitF) HPY04_RS10125 PF03328 HpcH/HpaI aldolase/citrate lyase family HPY04_RS10130 PF06857 Malonate decarboxylase delta subunit (MdcD) HPY04_RS10135 PF08218 Citrate lyase ligase C-terminal domain HPY04_RS10140 PF03390 2-hydroxycarboxylate transporter family HPY04_RS10145 PF04277 Oxaloacetate decarboxylase, gamma chain HPY04_RS10150 PF00364 Biotin-requiring enzyme HPY04_RS10150 PF02436 Conserved carboxylase domain HPY04_RS10150 PF00682 HMGL-like HPY04_RS10155 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY04_RS10160 PF17203 Single cache domain 3 HPY04_RS10160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS10165 PF12431 Transcriptional regulator HPY04_RS10165 PF00072 Response regulator receiver domain HPY04_RS10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS10180 PF03466 LysR substrate binding domain HPY04_RS10185 PF01266 FAD dependent oxidoreductase HPY04_RS10190 PF01235 Sodium:alanine symporter family HPY04_RS10195 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HPY04_RS10195 PF01648 4'-phosphopantetheinyl transferase superfamily HPY04_RS10200 PF00005 ABC transporter HPY04_RS10205 PF01032 FecCD transport family HPY04_RS10210 PF01032 FecCD transport family HPY04_RS10215 PF01497 Periplasmic binding protein HPY04_RS10230 PF00425 chorismate binding enzyme HPY04_RS10235 PF13193 AMP-binding enzyme C-terminal domain HPY04_RS10235 PF00501 AMP-binding enzyme HPY04_RS10240 PF00550 Phosphopantetheine attachment site HPY04_RS10240 PF00857 Isochorismatase family HPY04_RS10245 PF01184 GPR1/FUN34/yaaH family HPY04_RS10250 PF06483 Chitinase C HPY04_RS10250 PF00704 Glycosyl hydrolases family 18 HPY04_RS10255 PF00117 Glutamine amidotransferase class-I HPY04_RS10255 PF02540 NAD synthase HPY04_RS10255 PF00958 GMP synthase C terminal domain HPY04_RS10260 PF00571 CBS domain HPY04_RS10260 PF00478 IMP dehydrogenase / GMP reductase domain HPY04_RS10265 PF13742 OB-fold nucleic acid binding domain HPY04_RS10265 PF02601 Exonuclease VII, large subunit HPY04_RS10280 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPY04_RS10280 PF01926 50S ribosome-binding GTPase HPY04_RS10285 PF13360 PQQ-like domain HPY04_RS10290 PF09976 Tetratricopeptide repeat-like domain HPY04_RS10295 PF13393 Histidyl-tRNA synthetase HPY04_RS10295 PF03129 Anticodon binding domain HPY04_RS10300 PF04551 GcpE protein HPY04_RS10305 PF13464 Domain of unknown function (DUF4115) HPY04_RS10310 PF04055 Radical SAM superfamily HPY04_RS10315 PF00334 Nucleoside diphosphate kinase HPY04_RS10320 PF12404 Peptidase HPY04_RS10320 PF00883 Cytosol aminopeptidase family, catalytic domain HPY04_RS10325 PF04384 Iron-sulphur cluster assembly HPY04_RS10330 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY04_RS10335 PF00012 Hsp70 protein HPY04_RS10340 PF00226 DnaJ domain HPY04_RS10340 PF07743 HSCB C-terminal oligomerisation domain HPY04_RS10345 PF01521 Iron-sulphur cluster biosynthesis HPY04_RS10350 PF01592 NifU-like N terminal domain HPY04_RS10355 PF00266 Aminotransferase class-V HPY04_RS10360 PF02082 Transcriptional regulator HPY04_RS10365 PF00588 SpoU rRNA Methylase family HPY04_RS10370 PF00459 Inositol monophosphatase family HPY04_RS10375 PF07549 SecD/SecF GG Motif HPY04_RS10375 PF02355 Protein export membrane protein HPY04_RS10380 PF07549 SecD/SecF GG Motif HPY04_RS10380 PF13721 SecD export protein N-terminal TM region HPY04_RS10380 PF02355 Protein export membrane protein HPY04_RS10385 PF02699 Preprotein translocase subunit HPY04_RS10390 PF01702 Queuine tRNA-ribosyltransferase HPY04_RS10395 PF02547 Queuosine biosynthesis protein HPY04_RS10400 PF00571 CBS domain HPY04_RS10405 PF00463 Isocitrate lyase family HPY04_RS10410 PF01274 Malate synthase HPY04_RS10415 PF03466 LysR substrate binding domain HPY04_RS10415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS10420 PF10417 C-terminal domain of 1-Cys peroxiredoxin HPY04_RS10420 PF00578 AhpC/TSA family HPY04_RS10425 PF03932 CutC family HPY04_RS10430 PF03976 Polyphosphate kinase 2 (PPK2) HPY04_RS10435 PF01895 PhoU domain HPY04_RS10440 PF00005 ABC transporter HPY04_RS10445 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS10450 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS10455 PF13089 Polyphosphate kinase N-terminal domain HPY04_RS10455 PF17941 Polyphosphate kinase C-terminal domain 1 HPY04_RS10455 PF02503 Polyphosphate kinase middle domain HPY04_RS10455 PF13090 Polyphosphate kinase C-terminal domain 2 HPY04_RS10460 PF02541 Ppx/GppA phosphatase family HPY04_RS10465 PF12849 PBP superfamily domain HPY04_RS10470 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS10470 PF11808 Phosphate regulon sensor protein PhoR HPY04_RS10470 PF00989 PAS fold HPY04_RS10470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS10475 PF00072 Response regulator receiver domain HPY04_RS10475 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS10480 PF04381 Putative exonuclease, RdgC HPY04_RS10490 PF00037 4Fe-4S binding domain HPY04_RS10495 PF00881 Nitroreductase family HPY04_RS10535 PF02861 Clp amino terminal domain, pathogenicity island component HPY04_RS10535 PF00004 ATPase family associated with various cellular activities (AAA) HPY04_RS10535 PF10431 C-terminal, D2-small domain, of ClpB protein HPY04_RS10535 PF07724 AAA domain (Cdc48 subfamily) HPY04_RS10535 PF17871 AAA lid domain HPY04_RS10545 PF00849 RNA pseudouridylate synthase HPY04_RS10545 PF01479 S4 domain HPY04_RS10550 PF13525 Outer membrane lipoprotein HPY04_RS10555 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY04_RS10560 PF00800 Prephenate dehydratase HPY04_RS10560 PF01817 Chorismate mutase type II HPY04_RS10565 PF13416 Bacterial extracellular solute-binding protein HPY04_RS10570 PF00563 EAL domain HPY04_RS10570 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS10575 PF01931 Protein of unknown function DUF84 HPY04_RS10580 PF01371 Trp repressor protein HPY04_RS10585 PF01464 Transglycosylase SLT domain HPY04_RS10585 PF14718 Soluble lytic murein transglycosylase L domain HPY04_RS10590 PF12848 ABC transporter HPY04_RS10590 PF00005 ABC transporter HPY04_RS10595 PF07238 PilZ domain HPY04_RS10600 PF01817 Chorismate mutase type II HPY04_RS10600 PF02153 Prephenate dehydrogenase HPY04_RS10605 PF00793 DAHP synthetase I family HPY04_RS10610 PF07694 5TMR of 5TMR-LYT HPY04_RS10610 PF06580 Histidine kinase HPY04_RS10615 PF04397 LytTr DNA-binding domain HPY04_RS10615 PF00072 Response regulator receiver domain HPY04_RS10620 PF00933 Glycosyl hydrolase family 3 N terminal domain HPY04_RS10625 PF03702 Anhydro-N-acetylmuramic acid kinase HPY04_RS10630 PF13580 SIS domain HPY04_RS10640 PF02554 Carbon starvation protein CstA HPY04_RS10645 PF02401 LytB protein HPY04_RS10650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY04_RS10655 PF01252 Signal peptidase (SPase) II HPY04_RS10660 PF06827 Zinc finger found in FPG and IleRS HPY04_RS10660 PF00133 tRNA synthetases class I (I, L, M and V) HPY04_RS10660 PF08264 Anticodon-binding domain of tRNA HPY04_RS10665 PF01687 Riboflavin kinase HPY04_RS10665 PF06574 FAD synthetase HPY04_RS10670 PF03023 Lipid II flippase MurJ HPY04_RS10675 PF01649 Ribosomal protein S20 HPY04_RS10680 PF01022 Bacterial regulatory protein, arsR family HPY04_RS10685 PF03466 LysR substrate binding domain HPY04_RS10685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS10690 PF02690 Na+/Pi-cotransporter HPY04_RS10695 PF00303 Thymidylate synthase HPY04_RS10700 PF01790 Prolipoprotein diacylglyceryl transferase HPY04_RS10705 PF01925 Sulfite exporter TauE/SafE HPY04_RS10710 PF01590 GAF domain HPY04_RS10710 PF05524 PEP-utilising enzyme, N-terminal HPY04_RS10710 PF00391 PEP-utilising enzyme, mobile domain HPY04_RS10710 PF02896 PEP-utilising enzyme, TIM barrel domain HPY04_RS10715 PF00293 NUDIX domain HPY04_RS10720 PF02976 DNA mismatch repair enzyme MutH HPY04_RS10725 PF00248 Aldo/keto reductase family HPY04_RS10735 PF02954 Bacterial regulatory protein, Fis family HPY04_RS10735 PF00158 Sigma-54 interaction domain HPY04_RS10735 PF00072 Response regulator receiver domain HPY04_RS10740 PF01336 OB-fold nucleic acid binding domain HPY04_RS10740 PF00152 tRNA synthetases class II (D, K and N) HPY04_RS10750 PF05525 Branched-chain amino acid transport protein HPY04_RS10755 PF05175 Methyltransferase small domain HPY04_RS10760 PF00271 Helicase conserved C-terminal domain HPY04_RS10760 PF00270 DEAD/DEAH box helicase HPY04_RS10765 PF03144 Elongation factor Tu domain 2 HPY04_RS10765 PF00009 Elongation factor Tu GTP binding domain HPY04_RS10765 PF16658 Class II release factor RF3, C-terminal domain HPY04_RS10770 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS10770 PF00563 EAL domain HPY04_RS10770 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS10785 PF13508 Acetyltransferase (GNAT) domain HPY04_RS10790 PF02036 SCP-2 sterol transfer family HPY04_RS10795 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS10795 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS10795 PF00563 EAL domain HPY04_RS10800 PF01136 Peptidase family U32 HPY04_RS10805 PF01136 Peptidase family U32 HPY04_RS10820 PF07719 Tetratricopeptide repeat HPY04_RS10820 PF13181 Tetratricopeptide repeat HPY04_RS10825 PF00013 KH domain HPY04_RS10825 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HPY04_RS10825 PF01138 3' exoribonuclease family, domain 1 HPY04_RS10825 PF03725 3' exoribonuclease family, domain 2 HPY04_RS10825 PF00575 S1 RNA binding domain HPY04_RS10830 PF00312 Ribosomal protein S15 HPY04_RS10835 PF09157 Pseudouridine synthase II TruB, C-terminal HPY04_RS10835 PF01509 TruB family pseudouridylate synthase (N terminal domain) HPY04_RS10835 PF16198 tRNA pseudouridylate synthase B C-terminal domain HPY04_RS10840 PF02033 Ribosome-binding factor A HPY04_RS10845 PF04760 Translation initiation factor IF-2, N-terminal region HPY04_RS10845 PF00009 Elongation factor Tu GTP binding domain HPY04_RS10845 PF08364 Bacterial translation initiation factor IF-2 associated region HPY04_RS10845 PF11987 Translation-initiation factor 2 HPY04_RS10850 PF00575 S1 RNA binding domain HPY04_RS10850 PF08529 NusA N-terminal domain HPY04_RS10850 PF13184 NusA-like KH domain HPY04_RS10855 PF17384 RimP C-terminal SH3 domain HPY04_RS10855 PF02576 RimP N-terminal domain HPY04_RS10870 PF03840 Preprotein translocase SecG subunit HPY04_RS10875 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY04_RS10875 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY04_RS10875 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY04_RS10875 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY04_RS10880 PF00809 Pterin binding enzyme HPY04_RS10885 PF00004 ATPase family associated with various cellular activities (AAA) HPY04_RS10885 PF17862 AAA+ lid domain HPY04_RS10885 PF01434 Peptidase family M41 HPY04_RS10885 PF06480 FtsH Extracellular HPY04_RS10890 PF01728 FtsJ-like methyltransferase HPY04_RS10895 PF01985 CRS1 / YhbY (CRM) domain HPY04_RS10900 PF03449 Transcription elongation factor, N-terminal HPY04_RS10900 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY04_RS10905 PF13609 Gram-negative porin HPY04_RS10910 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HPY04_RS10915 PF01479 S4 domain HPY04_RS10915 PF00579 tRNA synthetases class I (W and Y) HPY04_RS10920 PF04225 Opacity-associated protein A LysM-like domain HPY04_RS10920 PF01551 Peptidase family M23 HPY04_RS10925 PF00873 AcrB/AcrD/AcrF family HPY04_RS10935 PF01521 Iron-sulphur cluster biosynthesis HPY04_RS10940 PF00202 Aminotransferase class-III HPY04_RS10945 PF01594 AI-2E family transporter HPY04_RS10950 PF08468 Methyltransferase small domain N-terminal HPY04_RS10950 PF05175 Methyltransferase small domain HPY04_RS10955 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS10955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS10955 PF00072 Response regulator receiver domain HPY04_RS10955 PF09308 LuxQ, periplasmic HPY04_RS10960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY04_RS10965 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS10970 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS10970 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY04_RS10975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS10975 PF00005 ABC transporter HPY04_RS10980 PF00005 ABC transporter HPY04_RS10980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS10990 PF01869 BadF/BadG/BcrA/BcrD ATPase family HPY04_RS10995 PF02838 Glycosyl hydrolase family 20, domain 2 HPY04_RS10995 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY04_RS11000 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HPY04_RS11000 PF06165 Glycosyltransferase family 36 HPY04_RS11005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY04_RS11005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY04_RS11005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY04_RS11005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY04_RS11010 PF00005 ABC transporter HPY04_RS11010 PF08402 TOBE domain HPY04_RS11020 PF13416 Bacterial extracellular solute-binding protein HPY04_RS11025 PF00909 Ammonium Transporter Family HPY04_RS11030 PF00543 Nitrogen regulatory protein P-II HPY04_RS11035 PF06062 Uncharacterised protein family (UPF0231) HPY04_RS11040 PF11791 Aconitate B N-terminal domain HPY04_RS11040 PF00330 Aconitase family (aconitate hydratase) HPY04_RS11040 PF06434 Aconitate hydratase 2 N-terminus HPY04_RS11045 PF01734 Patatin-like phospholipase HPY04_RS11050 PF00905 Penicillin binding protein transpeptidase domain HPY04_RS11050 PF14814 Bifunctional transglycosylase second domain HPY04_RS11050 PF00912 Transglycosylase HPY04_RS11055 PF00271 Helicase conserved C-terminal domain HPY04_RS11055 PF04408 Helicase associated domain (HA2) HPY04_RS11055 PF00270 DEAD/DEAH box helicase HPY04_RS11055 PF08482 ATP-dependent helicase C-terminal HPY04_RS11065 PF03749 Sugar fermentation stimulation protein RE domain HPY04_RS11065 PF17746 SfsA N-terminal OB domain HPY04_RS11070 PF01258 Prokaryotic dksA/traR C4-type zinc finger HPY04_RS11075 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY04_RS11080 PF12626 Polymerase A arginine-rich C-terminus HPY04_RS11080 PF01743 Poly A polymerase head domain HPY04_RS11080 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY04_RS11085 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY04_RS11090 PF02548 Ketopantoate hydroxymethyltransferase HPY04_RS11095 PF02569 Pantoate-beta-alanine ligase HPY04_RS11100 PF01061 ABC-2 type transporter HPY04_RS11105 PF00005 ABC transporter HPY04_RS11110 PF00916 Sulfate permease family HPY04_RS11110 PF01740 STAS domain HPY04_RS11115 PF00484 Carbonic anhydrase HPY04_RS11120 PF00156 Phosphoribosyl transferase domain HPY04_RS11125 PF00440 Bacterial regulatory proteins, tetR family HPY04_RS11130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY04_RS11135 PF04348 LppC putative lipoprotein HPY04_RS11140 PF02021 Uncharacterised protein family UPF0102 HPY04_RS11145 PF13580 SIS domain HPY04_RS11150 PF04972 BON domain HPY04_RS11155 PF04386 Stringent starvation protein B HPY04_RS11160 PF00043 Glutathione S-transferase, C-terminal domain HPY04_RS11160 PF02798 Glutathione S-transferase, N-terminal domain HPY04_RS11165 PF02167 Cytochrome C1 family HPY04_RS11170 PF00032 Cytochrome b(C-terminal)/b6/petD HPY04_RS11170 PF00033 Cytochrome b/b6/petB HPY04_RS11175 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HPY04_RS11175 PF00355 Rieske [2Fe-2S] domain HPY04_RS11180 PF00380 Ribosomal protein S9/S16 HPY04_RS11185 PF00572 Ribosomal protein L13 HPY04_RS11190 PF03969 AFG1-like ATPase HPY04_RS11200 PF00595 PDZ domain HPY04_RS11205 PF13180 PDZ domain HPY04_RS11210 PF01245 Ribosomal protein L19 HPY04_RS11215 PF01746 tRNA (Guanine-1)-methyltransferase HPY04_RS11220 PF05239 PRC-barrel domain HPY04_RS11220 PF01782 RimM N-terminal domain HPY04_RS11225 PF00886 Ribosomal protein S16 HPY04_RS11230 PF00448 SRP54-type protein, GTPase domain HPY04_RS11230 PF02978 Signal peptide binding domain HPY04_RS11230 PF02881 SRP54-type protein, helical bundle domain HPY04_RS11235 PF01578 Cytochrome C assembly protein HPY04_RS11240 PF01595 Cyclin M transmembrane N-terminal domain HPY04_RS11240 PF03471 Transporter associated domain HPY04_RS11240 PF00571 CBS domain HPY04_RS11245 PF02664 S-Ribosylhomocysteinase (LuxS) HPY04_RS11250 PF04262 Glutamate-cysteine ligase HPY04_RS11255 PF00675 Insulinase (Peptidase family M16) HPY04_RS11255 PF05193 Peptidase M16 inactive domain HPY04_RS11260 PF09335 SNARE associated Golgi protein HPY04_RS11270 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY04_RS11275 PF02436 Conserved carboxylase domain HPY04_RS11275 PF00682 HMGL-like HPY04_RS11275 PF00364 Biotin-requiring enzyme HPY04_RS11280 PF04277 Oxaloacetate decarboxylase, gamma chain HPY04_RS11325 PF02599 Global regulator protein family HPY04_RS11330 PF00696 Amino acid kinase family HPY04_RS11330 PF01842 ACT domain HPY04_RS11330 PF13840 ACT domain HPY04_RS11335 PF01411 tRNA synthetases class II (A) HPY04_RS11335 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY04_RS11335 PF02272 DHHA1 domain HPY04_RS11340 PF02631 RecX family HPY04_RS11345 PF00154 recA bacterial DNA recombination protein HPY04_RS11350 PF02464 Competence-damaged protein HPY04_RS11355 PF00005 ABC transporter HPY04_RS11355 PF12857 TOBE-like domain HPY04_RS11360 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS11365 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS11375 PF00291 Pyridoxal-phosphate dependent enzyme HPY04_RS11380 PF00488 MutS domain V HPY04_RS11380 PF05192 MutS domain III HPY04_RS11380 PF05188 MutS domain II HPY04_RS11380 PF01624 MutS domain I HPY04_RS11380 PF05190 MutS family domain IV HPY04_RS11385 PF00140 Sigma-70 factor, region 1.2 HPY04_RS11385 PF04539 Sigma-70 region 3 HPY04_RS11385 PF04542 Sigma-70 region 2 HPY04_RS11385 PF04545 Sigma-70, region 4 HPY04_RS11390 PF01476 LysM domain HPY04_RS11390 PF01551 Peptidase family M23 HPY04_RS11400 PF01975 Survival protein SurE HPY04_RS11405 PF01142 tRNA pseudouridine synthase D (TruD) HPY04_RS11410 PF02542 YgbB family HPY04_RS11415 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HPY04_RS11420 PF04977 Septum formation initiator HPY04_RS11425 PF02673 Bacitracin resistance protein BacA HPY04_RS11430 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY04_RS11435 PF02152 Dihydroneopterin aldolase HPY04_RS11440 PF02660 Glycerol-3-phosphate acyltransferase HPY04_RS11445 PF00561 alpha/beta hydrolase fold HPY04_RS11450 PF00814 Glycoprotease family HPY04_RS11455 PF01165 Ribosomal protein S21 HPY04_RS11460 PF09424 Yqey-like protein HPY04_RS11465 PF08278 DNA primase DnaG DnaB-binding HPY04_RS11465 PF08275 DNA primase catalytic core, N-terminal domain HPY04_RS11465 PF01807 CHC2 zinc finger HPY04_RS11465 PF10410 DnaB-helicase binding domain of primase HPY04_RS11470 PF04545 Sigma-70, region 4 HPY04_RS11470 PF04542 Sigma-70 region 2 HPY04_RS11470 PF00140 Sigma-70 factor, region 1.2 HPY04_RS11470 PF03979 Sigma-70 factor, region 1.1 HPY04_RS11470 PF04546 Sigma-70, non-essential region HPY04_RS11470 PF04539 Sigma-70 region 3 HPY04_RS11485 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY04_RS11490 PF01380 SIS domain HPY04_RS11495 PF08220 DeoR-like helix-turn-helix domain HPY04_RS11495 PF00455 DeoR C terminal sensor domain HPY04_RS11500 PF00224 Pyruvate kinase, barrel domain HPY04_RS11500 PF02887 Pyruvate kinase, alpha/beta domain HPY04_RS11505 PF04402 Protein of unknown function (DUF541) HPY04_RS11510 PF03466 LysR substrate binding domain HPY04_RS11510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS11515 PF01810 LysE type translocator HPY04_RS11520 PF05552 Conserved TM helix HPY04_RS11520 PF00924 Mechanosensitive ion channel HPY04_RS11525 PF01116 Fructose-bisphosphate aldolase class-II HPY04_RS11530 PF00162 Phosphoglycerate kinase HPY04_RS11535 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY04_RS11535 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY04_RS11540 PF00593 TonB dependent receptor HPY04_RS11540 PF07715 TonB-dependent Receptor Plug Domain HPY04_RS11545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS11545 PF03466 LysR substrate binding domain HPY04_RS11550 PF00456 Transketolase, thiamine diphosphate binding domain HPY04_RS11550 PF02780 Transketolase, C-terminal domain HPY04_RS11550 PF02779 Transketolase, pyrimidine binding domain HPY04_RS11555 PF00438 S-adenosylmethionine synthetase, N-terminal domain HPY04_RS11555 PF02772 S-adenosylmethionine synthetase, central domain HPY04_RS11555 PF02773 S-adenosylmethionine synthetase, C-terminal domain HPY04_RS11560 PF10263 SprT-like family HPY04_RS11560 PF17283 SprT-like zinc ribbon domain HPY04_RS11565 PF04231 Endonuclease I HPY04_RS11570 PF04452 RNA methyltransferase HPY04_RS11575 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HPY04_RS11575 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HPY04_RS11580 PF02622 Uncharacterized ACR, COG1678 HPY04_RS11585 PF03652 Holliday junction resolvase HPY04_RS11590 PF00579 tRNA synthetases class I (W and Y) HPY04_RS11590 PF01479 S4 domain HPY04_RS11600 PF00437 Type II/IV secretion system protein HPY04_RS11605 PF00437 Type II/IV secretion system protein HPY04_RS11610 PF01168 Alanine racemase, N-terminal domain HPY04_RS11615 PF03807 NADP oxidoreductase coenzyme F420-dependent HPY04_RS11615 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPY04_RS11620 PF02325 YGGT family HPY04_RS11625 PF02594 Uncharacterised ACR, YggU family COG1872 HPY04_RS11635 PF01725 Ham1 family HPY04_RS11640 PF04055 Radical SAM superfamily HPY04_RS11640 PF06969 HemN C-terminal domain HPY04_RS11645 PF04960 Glutaminase HPY04_RS11650 PF02390 Putative methyltransferase HPY04_RS11655 PF14815 NUDIX domain HPY04_RS11655 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY04_RS11655 PF00633 Helix-hairpin-helix motif HPY04_RS11655 PF10576 Iron-sulfur binding domain of endonuclease III HPY04_RS11660 PF04362 Bacterial Fe(2+) trafficking HPY04_RS11665 PF01464 Transglycosylase SLT domain HPY04_RS11665 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HPY04_RS11690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS11690 PF00672 HAMP domain HPY04_RS11690 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS11720 PF00226 DnaJ domain HPY04_RS11720 PF05099 Tellurite resistance protein TerB HPY04_RS11725 PF04453 LPS transport system D HPY04_RS11725 PF03968 OstA-like protein HPY04_RS11730 PF09312 SurA N-terminal domain HPY04_RS11735 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HPY04_RS11740 PF00398 Ribosomal RNA adenine dimethylase HPY04_RS11745 PF04379 ApaG domain HPY04_RS11750 PF00149 Calcineurin-like phosphoesterase HPY04_RS11755 PF00186 Dihydrofolate reductase HPY04_RS11760 PF12821 Threonine/Serine exporter, ThrE HPY04_RS11765 PF06738 Putative threonine/serine exporter HPY04_RS11770 PF01926 50S ribosome-binding GTPase HPY04_RS11770 PF01018 GTP1/OBG HPY04_RS11775 PF01016 Ribosomal L27 protein HPY04_RS11780 PF00829 Ribosomal prokaryotic L21 protein HPY04_RS11785 PF00348 Polyprenyl synthetase HPY04_RS11790 PF13520 Amino acid permease HPY04_RS11795 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HPY04_RS11795 PF00056 lactate/malate dehydrogenase, NAD binding domain HPY04_RS11800 PF02863 Arginine repressor, C-terminal domain HPY04_RS11800 PF01316 Arginine repressor, DNA binding domain HPY04_RS11805 PF16868 NMT1-like family HPY04_RS11815 PF00582 Universal stress protein family HPY04_RS11830 PF06877 Regulator of ribonuclease activity B HPY04_RS11840 PF01523 Putative modulator of DNA gyrase HPY04_RS11845 PF00795 Carbon-nitrogen hydrolase HPY04_RS11850 PF13502 AsmA-like C-terminal region HPY04_RS11850 PF13116 Protein of unknown function HPY04_RS11855 PF10150 Ribonuclease E/G family HPY04_RS11855 PF00575 S1 RNA binding domain HPY04_RS11860 PF02545 Maf-like protein HPY04_RS11865 PF04093 rod shape-determining protein MreD HPY04_RS11870 PF04085 rod shape-determining protein MreC HPY04_RS11905 PF07963 Prokaryotic N-terminal methylation motif HPY04_RS11905 PF00114 Pilin (bacterial filament) HPY04_RS11910 PF07963 Prokaryotic N-terminal methylation motif HPY04_RS11910 PF00114 Pilin (bacterial filament) HPY04_RS11920 PF00482 Type II secretion system (T2SS), protein F HPY04_RS11925 PF00437 Type II/IV secretion system protein HPY04_RS11935 PF13401 AAA domain HPY04_RS11935 PF01471 Putative peptidoglycan binding domain HPY04_RS11940 PF00263 Bacterial type II and III secretion system protein HPY04_RS11940 PF03958 Bacterial type II/III secretion system short domain HPY04_RS11940 PF11741 AMIN domain HPY04_RS11940 PF07660 Secretin and TonB N terminus short domain HPY04_RS11960 PF17157 Gammaproteobacterial periplasmic sensor domain HPY04_RS11960 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS11960 PF00563 EAL domain HPY04_RS11970 PF02463 RecF/RecN/SMC N terminal domain HPY04_RS11975 PF01420 Type I restriction modification DNA specificity domain HPY04_RS11980 PF12161 HsdM N-terminal domain HPY04_RS11980 PF02384 N-6 DNA Methylase HPY04_RS11985 PF08463 EcoEI R protein C-terminal HPY04_RS11985 PF00271 Helicase conserved C-terminal domain HPY04_RS11985 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HPY04_RS11985 PF04851 Type III restriction enzyme, res subunit HPY04_RS12015 PF00436 Single-strand binding protein family HPY04_RS12020 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS12025 PF00483 Nucleotidyl transferase HPY04_RS12030 PF00005 ABC transporter HPY04_RS12030 PF17755 UvrA DNA-binding domain HPY04_RS12030 PF17760 UvrA interaction domain HPY04_RS12040 PF14706 Transposase DNA-binding HPY04_RS12040 PF01609 Transposase DDE domain HPY04_RS12040 PF02281 Transposase Tn5 dimerisation domain HPY04_RS12045 PF00266 Aminotransferase class-V HPY04_RS12050 PF00696 Amino acid kinase family HPY04_RS12050 PF01842 ACT domain HPY04_RS12055 PF00809 Pterin binding enzyme HPY04_RS12055 PF02607 B12 binding domain HPY04_RS12055 PF02310 B12 binding domain HPY04_RS12055 PF02965 Vitamin B12 dependent methionine synthase, activation domain HPY04_RS12055 PF02574 Homocysteine S-methyltransferase HPY04_RS12060 PF00999 Sodium/hydrogen exchanger family HPY04_RS12120 PF01507 Phosphoadenosine phosphosulfate reductase family HPY04_RS12125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HPY04_RS12125 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HPY04_RS12130 PF00667 FAD binding domain HPY04_RS12130 PF00258 Flavodoxin HPY04_RS12130 PF00175 Oxidoreductase NAD-binding domain HPY04_RS12150 PF09583 Phage shock protein G (Phageshock_PspG) HPY04_RS12155 PF01207 Dihydrouridine synthase (Dus) HPY04_RS12160 PF01475 Ferric uptake regulator family HPY04_RS12170 PF12706 Beta-lactamase superfamily domain HPY04_RS12175 PF00342 Phosphoglucose isomerase HPY04_RS12185 PF01168 Alanine racemase, N-terminal domain HPY04_RS12185 PF00842 Alanine racemase, C-terminal domain HPY04_RS12190 PF00772 DnaB-like helicase N terminal domain HPY04_RS12190 PF03796 DnaB-like helicase C terminal domain HPY04_RS12200 PF03948 Ribosomal protein L9, C-terminal domain HPY04_RS12200 PF01281 Ribosomal protein L9, N-terminal domain HPY04_RS12205 PF01084 Ribosomal protein S18 HPY04_RS12210 PF00436 Single-strand binding protein family HPY04_RS12215 PF01250 Ribosomal protein S6 HPY04_RS12220 PF00210 Ferritin-like domain HPY04_RS12225 PF04324 BFD-like [2Fe-2S] binding domain HPY04_RS12230 PF03143 Elongation factor Tu C-terminal domain HPY04_RS12230 PF00009 Elongation factor Tu GTP binding domain HPY04_RS12230 PF03144 Elongation factor Tu domain 2 HPY04_RS12235 PF14492 Elongation Factor G, domain II HPY04_RS12235 PF03144 Elongation factor Tu domain 2 HPY04_RS12235 PF00009 Elongation factor Tu GTP binding domain HPY04_RS12235 PF00679 Elongation factor G C-terminus HPY04_RS12235 PF03764 Elongation factor G, domain IV HPY04_RS12240 PF00177 Ribosomal protein S7p/S5e HPY04_RS12245 PF00164 Ribosomal protein S12/S23 HPY04_RS12255 PF02635 DsrE/DsrF-like family HPY04_RS12260 PF02635 DsrE/DsrF-like family HPY04_RS12265 PF08348 YheO-like PAS domain HPY04_RS12265 PF13309 HTH domain HPY04_RS12270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY04_RS12270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY04_RS12280 PF04102 SlyX HPY04_RS12285 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HPY04_RS12290 PF01145 SPFH domain / Band 7 family HPY04_RS12295 PF01145 SPFH domain / Band 7 family HPY04_RS12295 PF12221 Bacterial membrane protein N terminal HPY04_RS12300 PF13167 GTP-binding GTPase N-terminal HPY04_RS12300 PF01926 50S ribosome-binding GTPase HPY04_RS12300 PF16360 GTP-binding GTPase Middle Region HPY04_RS12305 PF17209 Hfq protein HPY04_RS12315 PF08676 MutL C terminal dimerisation domain HPY04_RS12315 PF01119 DNA mismatch repair protein, C-terminal domain HPY04_RS12320 PF01520 N-acetylmuramoyl-L-alanine amidase HPY04_RS12325 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HPY04_RS12330 PF08331 Domain of unknown function (DUF1730) HPY04_RS12380 PF00929 Exonuclease HPY04_RS12385 PF03193 RsgA GTPase HPY04_RS12390 PF02666 Phosphatidylserine decarboxylase HPY04_RS12395 PF00939 Sodium:sulfate symporter transmembrane region HPY04_RS12405 PF01676 Metalloenzyme superfamily HPY04_RS12405 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HPY04_RS12410 PF01551 Peptidase family M23 HPY04_RS12425 PF01208 Uroporphyrinogen decarboxylase (URO-D) HPY04_RS12430 PF00293 NUDIX domain HPY04_RS12430 PF09297 NADH pyrophosphatase zinc ribbon domain HPY04_RS12435 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HPY04_RS12440 PF04998 RNA polymerase Rpb1, domain 5 HPY04_RS12440 PF05000 RNA polymerase Rpb1, domain 4 HPY04_RS12440 PF04983 RNA polymerase Rpb1, domain 3 HPY04_RS12440 PF04997 RNA polymerase Rpb1, domain 1 HPY04_RS12440 PF00623 RNA polymerase Rpb1, domain 2 HPY04_RS12445 PF04561 RNA polymerase Rpb2, domain 2 HPY04_RS12445 PF04563 RNA polymerase beta subunit HPY04_RS12445 PF04565 RNA polymerase Rpb2, domain 3 HPY04_RS12445 PF10385 RNA polymerase beta subunit external 1 domain HPY04_RS12445 PF00562 RNA polymerase Rpb2, domain 6 HPY04_RS12445 PF04560 RNA polymerase Rpb2, domain 7 HPY04_RS12450 PF00542 Ribosomal protein L7/L12 C-terminal domain HPY04_RS12450 PF16320 Ribosomal protein L7/L12 dimerisation domain HPY04_RS12455 PF00466 Ribosomal protein L10 HPY04_RS12460 PF00687 Ribosomal protein L1p/L10e family HPY04_RS12465 PF03946 Ribosomal protein L11, N-terminal domain HPY04_RS12465 PF00298 Ribosomal protein L11, RNA binding domain HPY04_RS12470 PF00467 KOW motif HPY04_RS12470 PF02357 Transcription termination factor nusG HPY04_RS12475 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HPY04_RS12480 PF03143 Elongation factor Tu C-terminal domain HPY04_RS12480 PF00009 Elongation factor Tu GTP binding domain HPY04_RS12480 PF03144 Elongation factor Tu domain 2 HPY04_RS12505 PF00485 Phosphoribulokinase / Uridine kinase family HPY04_RS12510 PF03099 Biotin/lipoate A/B protein ligase family HPY04_RS12510 PF02237 Biotin protein ligase C terminal domain HPY04_RS12510 PF08279 HTH domain HPY04_RS12515 PF01565 FAD binding domain HPY04_RS12515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HPY04_RS12525 PF13091 PLD-like domain HPY04_RS12560 PF00175 Oxidoreductase NAD-binding domain HPY04_RS12565 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY04_RS12565 PF00970 Oxidoreductase FAD-binding domain HPY04_RS12565 PF00175 Oxidoreductase NAD-binding domain HPY04_RS12570 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HPY04_RS12580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY04_RS12580 PF07498 Rho termination factor, N-terminal domain HPY04_RS12580 PF07497 Rho termination factor, RNA-binding domain HPY04_RS12585 PF00085 Thioredoxin HPY04_RS12590 PF00271 Helicase conserved C-terminal domain HPY04_RS12590 PF00270 DEAD/DEAH box helicase HPY04_RS12600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS12600 PF00072 Response regulator receiver domain HPY04_RS12600 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS12600 PF09456 RcsC Alpha-Beta-Loop (ABL) HPY04_RS12605 PF12832 MFS_1 like family HPY04_RS12620 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY04_RS12620 PF13193 AMP-binding enzyme C-terminal domain HPY04_RS12620 PF00501 AMP-binding enzyme HPY04_RS12625 PF01220 Dehydroquinase class II HPY04_RS12630 PF00364 Biotin-requiring enzyme HPY04_RS12635 PF02785 Biotin carboxylase C-terminal domain HPY04_RS12635 PF00289 Biotin carboxylase, N-terminal domain HPY04_RS12635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY04_RS12645 PF01207 Dihydrouridine synthase (Dus) HPY04_RS12650 PF02954 Bacterial regulatory protein, Fis family HPY04_RS12655 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS12655 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY04_RS12660 PF00920 Dehydratase family HPY04_RS12665 PF01202 Shikimate kinase HPY04_RS12670 PF02447 GntP family permease HPY04_RS12675 PF01081 KDPG and KHG aldolase HPY04_RS12680 PF07715 TonB-dependent Receptor Plug Domain HPY04_RS12680 PF00593 TonB dependent receptor HPY04_RS12695 PF17200 Single Cache domain 2 HPY04_RS12695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS12695 PF00672 HAMP domain HPY04_RS12700 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY04_RS12700 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY04_RS12700 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY04_RS12705 PF13520 Amino acid permease HPY04_RS12710 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS12710 PF18500 CadC C-terminal domain 1 HPY04_RS12715 PF13411 MerR HTH family regulatory protein HPY04_RS12725 PF01808 AICARFT/IMPCHase bienzyme HPY04_RS12725 PF02142 MGS-like domain HPY04_RS12730 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HPY04_RS12730 PF02843 Phosphoribosylglycinamide synthetase, C domain HPY04_RS12730 PF02844 Phosphoribosylglycinamide synthetase, N domain HPY04_RS12740 PF00216 Bacterial DNA-binding protein HPY04_RS12745 PF01595 Cyclin M transmembrane N-terminal domain HPY04_RS12745 PF00571 CBS domain HPY04_RS12755 PF01609 Transposase DDE domain HPY04_RS12755 PF02281 Transposase Tn5 dimerisation domain HPY04_RS12755 PF14706 Transposase DNA-binding HPY04_RS12760 PF04222 Protein of unknown function (DUF416) HPY04_RS12765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY04_RS12770 PF03167 Uracil DNA glycosylase superfamily HPY04_RS12775 PF00924 Mechanosensitive ion channel HPY04_RS12790 PF00753 Metallo-beta-lactamase superfamily HPY04_RS12790 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HPY04_RS12790 PF10996 Beta-Casp domain HPY04_RS12800 PF00953 Glycosyl transferase family 4 HPY04_RS12805 PF13477 Glycosyl transferase 4-like HPY04_RS12805 PF00534 Glycosyl transferases group 1 HPY04_RS12830 PF01370 NAD dependent epimerase/dehydratase family HPY04_RS12835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY04_RS12835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPY04_RS12835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY04_RS12840 PF02706 Chain length determinant protein HPY04_RS12840 PF13614 AAA domain HPY04_RS12840 PF13807 G-rich domain on putative tyrosine kinase HPY04_RS12845 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY04_RS12850 PF02563 Polysaccharide biosynthesis/export protein HPY04_RS12850 PF10531 SLBB domain HPY04_RS12850 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HPY04_RS12860 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HPY04_RS12870 PF06082 Exopolysaccharide biosynthesis protein YbjH HPY04_RS12880 PF02397 Bacterial sugar transferase HPY04_RS12885 PF01370 NAD dependent epimerase/dehydratase family HPY04_RS12890 PF02719 Polysaccharide biosynthesis protein HPY04_RS12910 PF05523 WxcM-like, C-terminal HPY04_RS12915 PF00535 Glycosyl transferase family 2 HPY04_RS12920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPY04_RS12930 PF13649 Methyltransferase domain HPY04_RS12935 PF00005 ABC transporter HPY04_RS12945 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HPY04_RS12950 PF04321 RmlD substrate binding domain HPY04_RS12955 PF00483 Nucleotidyl transferase HPY04_RS12960 PF16363 GDP-mannose 4,6 dehydratase HPY04_RS12965 PF01370 NAD dependent epimerase/dehydratase family HPY04_RS12975 PF00535 Glycosyl transferase family 2 HPY04_RS12980 PF00457 Glycosyl hydrolases family 11 HPY04_RS12980 PF01522 Polysaccharide deacetylase HPY04_RS12985 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY04_RS12990 PF04488 Glycosyltransferase sugar-binding region containing DXD motif HPY04_RS12995 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HPY04_RS13000 PF00583 Acetyltransferase (GNAT) family HPY04_RS13005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPY04_RS13025 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY04_RS13030 PF00535 Glycosyl transferase family 2 HPY04_RS13035 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY04_RS13040 PF01467 Cytidylyltransferase-like HPY04_RS13045 PF06827 Zinc finger found in FPG and IleRS HPY04_RS13045 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HPY04_RS13045 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HPY04_RS13055 PF00471 Ribosomal protein L33 HPY04_RS13060 PF00830 Ribosomal L28 family HPY04_RS13065 PF04002 RadC-like JAB domain HPY04_RS13070 PF02743 Cache domain HPY04_RS13070 PF00672 HAMP domain HPY04_RS13070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS13075 PF02441 Flavoprotein HPY04_RS13075 PF04127 DNA / pantothenate metabolism flavoprotein HPY04_RS13085 PF00440 Bacterial regulatory proteins, tetR family HPY04_RS13090 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY04_RS13095 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY04_RS13100 PF00156 Phosphoribosyl transferase domain HPY04_RS13105 PF01138 3' exoribonuclease family, domain 1 HPY04_RS13105 PF03725 3' exoribonuclease family, domain 2 HPY04_RS13110 PF08340 Domain of unknown function (DUF1732) HPY04_RS13110 PF03755 YicC-like family, N-terminal region HPY04_RS13125 PF00004 ATPase family associated with various cellular activities (AAA) HPY04_RS13130 PF00082 Subtilase family HPY04_RS13175 PF08751 TrwC relaxase HPY04_RS13175 PF18340 DNA relaxase TraI 2B/2B-like domain HPY04_RS13175 PF07057 DNA helicase TraI HPY04_RS13175 PF18272 single-stranded DNA binding TraI N-terminal subdomain HPY04_RS13255 PF03350 Uncharacterized protein family, UPF0114 HPY04_RS13260 PF02378 Phosphotransferase system, EIIC HPY04_RS13260 PF00367 phosphotransferase system, EIIB HPY04_RS13265 PF13580 SIS domain HPY04_RS13270 PF01418 Helix-turn-helix domain, rpiR family HPY04_RS13270 PF01380 SIS domain HPY04_RS13275 PF01032 FecCD transport family HPY04_RS13280 PF01497 Periplasmic binding protein HPY04_RS13285 PF00005 ABC transporter HPY04_RS13290 PF07715 TonB-dependent Receptor Plug Domain HPY04_RS13290 PF00593 TonB dependent receptor HPY04_RS13295 PF00005 ABC transporter HPY04_RS13295 PF00664 ABC transporter transmembrane region HPY04_RS13310 PF00271 Helicase conserved C-terminal domain HPY04_RS13310 PF09382 RQC domain HPY04_RS13310 PF00270 DEAD/DEAH box helicase HPY04_RS13310 PF16124 RecQ zinc-binding HPY04_RS13310 PF00570 HRDC domain HPY04_RS13315 PF00892 EamA-like transporter family HPY04_RS13325 PF12833 Helix-turn-helix domain HPY04_RS13330 PF01810 LysE type translocator HPY04_RS13335 PF14706 Transposase DNA-binding HPY04_RS13335 PF01609 Transposase DDE domain HPY04_RS13335 PF02281 Transposase Tn5 dimerisation domain HPY04_RS13340 PF13361 UvrD-like helicase C-terminal domain HPY04_RS13340 PF00580 UvrD/REP helicase N-terminal domain HPY04_RS13345 PF01432 Peptidase family M3 HPY04_RS13350 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HPY04_RS13355 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS13355 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY04_RS13365 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY04_RS13365 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS13375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY04_RS13380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS13380 PF00005 ABC transporter HPY04_RS13415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY04_RS13420 PF00580 UvrD/REP helicase N-terminal domain HPY04_RS13420 PF13361 UvrD-like helicase C-terminal domain HPY04_RS13425 PF00440 Bacterial regulatory proteins, tetR family HPY04_RS13430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY04_RS13435 PF00873 AcrB/AcrD/AcrF family HPY04_RS13440 PF04380 Membrane fusogenic activity HPY04_RS13445 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HPY04_RS13445 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HPY04_RS13450 PF03466 LysR substrate binding domain HPY04_RS13450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS13520 PF12724 Flavodoxin domain HPY04_RS13525 PF02386 Cation transport protein HPY04_RS13530 PF01205 Uncharacterized protein family UPF0029 HPY04_RS13530 PF09186 Domain of unknown function (DUF1949) HPY04_RS13535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY04_RS13535 PF00378 Enoyl-CoA hydratase/isomerase HPY04_RS13535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY04_RS13540 PF02803 Thiolase, C-terminal domain HPY04_RS13540 PF00108 Thiolase, N-terminal domain HPY04_RS13545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS13545 PF03466 LysR substrate binding domain HPY04_RS13550 PF07690 Major Facilitator Superfamily HPY04_RS13555 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS13555 PF12804 MobA-like NTP transferase domain HPY04_RS13560 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HPY04_RS13560 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HPY04_RS13565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY04_RS13565 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY04_RS13570 PF00231 ATP synthase HPY04_RS13575 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY04_RS13575 PF00306 ATP synthase alpha/beta chain, C terminal domain HPY04_RS13575 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY04_RS13580 PF00213 ATP synthase delta (OSCP) subunit HPY04_RS13585 PF00430 ATP synthase B/B' CF(0) HPY04_RS13590 PF00137 ATP synthase subunit C HPY04_RS13595 PF00119 ATP synthase A chain HPY04_RS13600 PF03899 ATP synthase I chain HPY04_RS13605 PF17762 HTH domain found in ParB protein HPY04_RS13605 PF02195 ParB-like nuclease domain HPY04_RS13610 PF13614 AAA domain HPY04_RS13615 PF02527 rRNA small subunit methyltransferase G HPY04_RS13620 PF13932 GidA associated domain HPY04_RS13620 PF01134 Glucose inhibited division protein A HPY04_RS13625 PF00258 Flavodoxin HPY04_RS13630 PF01926 50S ribosome-binding GTPase HPY04_RS13630 PF12631 MnmE helical domain HPY04_RS13630 PF10396 GTP-binding protein TrmE N-terminus HPY04_RS13635 PF02096 60Kd inner membrane protein HPY04_RS13635 PF14849 YidC periplasmic domain HPY04_RS13640 PF01809 Putative membrane protein insertion efficiency factor HPY04_RS13645 PF00825 Ribonuclease P HPY04_RS13650 PF00468 Ribosomal protein L34 HPY04_RS13655 PF00005 ABC transporter HPY04_RS13660 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS13665 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY04_RS13670 PF08775 ParB family HPY04_RS13670 PF02195 ParB-like nuclease domain HPY04_RS13675 PF18607 ParA helix turn helix domain HPY04_RS13675 PF13614 AAA domain HPY04_RS13700 PF01709 Transcriptional regulator HPY04_RS13705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY04_RS13705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HPY04_RS13710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS13710 PF00672 HAMP domain HPY04_RS13710 PF17200 Single Cache domain 2 HPY04_RS13715 PF10928 Protein of unknown function (DUF2810) HPY04_RS13720 PF17874 MalT-like TPR region HPY04_RS13720 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS13725 PF00343 Carbohydrate phosphorylase HPY04_RS13730 PF02446 4-alpha-glucanotransferase HPY04_RS13735 PF00128 Alpha amylase, catalytic domain HPY04_RS13735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY04_RS13735 PF02806 Alpha amylase, C-terminal all-beta domain HPY04_RS13740 PF05638 Type VI secretion system effector, Hcp HPY04_RS13745 PF04717 Type VI secretion system, phage-baseplate injector HPY04_RS13745 PF16671 Actin cross-linking domain HPY04_RS13770 PF01757 Acyltransferase family HPY04_RS13770 PF00842 Alanine racemase, C-terminal domain HPY04_RS13770 PF01168 Alanine racemase, N-terminal domain HPY04_RS13780 PF00939 Sodium:sulfate symporter transmembrane region HPY04_RS13785 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY04_RS13790 PF08329 Chitinase A, N-terminal domain HPY04_RS13790 PF00704 Glycosyl hydrolases family 18 HPY04_RS13805 PF02743 Cache domain HPY04_RS13805 PF00672 HAMP domain HPY04_RS13805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS13825 PF01569 PAP2 superfamily HPY04_RS13830 PF00375 Sodium:dicarboxylate symporter family HPY04_RS13840 PF02630 SCO1/SenC HPY04_RS13855 PF03616 Sodium/glutamate symporter HPY04_RS13860 PF07238 PilZ domain HPY04_RS13860 PF12945 Flagellar protein YcgR HPY04_RS13875 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS13890 PF01048 Phosphorylase superfamily HPY04_RS13895 PF08349 Protein of unknown function (DUF1722) HPY04_RS13900 PF13411 MerR HTH family regulatory protein HPY04_RS13905 PF03441 FAD binding domain of DNA photolyase HPY04_RS13905 PF00875 DNA photolyase HPY04_RS13910 PF01476 LysM domain HPY04_RS13910 PF17969 L,D-transpeptidase C-terminal domain HPY04_RS13910 PF03734 L,D-transpeptidase catalytic domain HPY04_RS13920 PF00271 Helicase conserved C-terminal domain HPY04_RS13920 PF00270 DEAD/DEAH box helicase HPY04_RS13925 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HPY04_RS13925 PF00326 Prolyl oligopeptidase family HPY04_RS13930 PF07715 TonB-dependent Receptor Plug Domain HPY04_RS13930 PF00593 TonB dependent receptor HPY04_RS13950 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS13950 PF00672 HAMP domain HPY04_RS13950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS13955 PF12849 PBP superfamily domain HPY04_RS13960 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS13965 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS13970 PF00005 ABC transporter HPY04_RS13975 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS13975 PF00563 EAL domain HPY04_RS13975 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS13990 PF00916 Sulfate permease family HPY04_RS13990 PF01740 STAS domain HPY04_RS14000 PF01476 LysM domain HPY04_RS14000 PF08525 Opacity-associated protein A N-terminal motif HPY04_RS14000 PF01551 Peptidase family M23 HPY04_RS14005 PF13188 PAS domain HPY04_RS14005 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS14005 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS14005 PF00563 EAL domain HPY04_RS14010 PF03466 LysR substrate binding domain HPY04_RS14010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS14015 PF07690 Major Facilitator Superfamily HPY04_RS14020 PF09278 MerR, DNA binding HPY04_RS14020 PF00376 MerR family regulatory protein HPY04_RS14035 PF00375 Sodium:dicarboxylate symporter family HPY04_RS14045 PF02001 Protein of unknown function DUF134 HPY04_RS14065 PF01447 Thermolysin metallopeptidase, catalytic domain HPY04_RS14065 PF01483 Proprotein convertase P-domain HPY04_RS14065 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY04_RS14065 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY04_RS14075 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HPY04_RS14075 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HPY04_RS14080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY04_RS14080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPY04_RS14085 PF00581 Rhodanese-like domain HPY04_RS14090 PF00563 EAL domain HPY04_RS14090 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS14095 PF13419 Haloacid dehalogenase-like hydrolase HPY04_RS14100 PF01740 STAS domain HPY04_RS14100 PF00916 Sulfate permease family HPY04_RS14105 PF00849 RNA pseudouridylate synthase HPY04_RS14165 PF17871 AAA lid domain HPY04_RS14165 PF10431 C-terminal, D2-small domain, of ClpB protein HPY04_RS14165 PF07724 AAA domain (Cdc48 subfamily) HPY04_RS14165 PF00004 ATPase family associated with various cellular activities (AAA) HPY04_RS14195 PF16671 Actin cross-linking domain HPY04_RS14195 PF04717 Type VI secretion system, phage-baseplate injector HPY04_RS14210 PF05025 RbsD / FucU transport protein family HPY04_RS14215 PF00005 ABC transporter HPY04_RS14220 PF02653 Branched-chain amino acid transport system / permease component HPY04_RS14225 PF13407 Periplasmic binding protein domain HPY04_RS14230 PF00294 pfkB family carbohydrate kinase HPY04_RS14235 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS14240 PF04973 Nicotinamide mononucleotide transporter HPY04_RS14245 PF01048 Phosphorylase superfamily HPY04_RS14255 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY04_RS14260 PF07690 Major Facilitator Superfamily HPY04_RS14275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS14275 PF02743 Cache domain HPY04_RS14275 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS14280 PF02954 Bacterial regulatory protein, Fis family HPY04_RS14280 PF00072 Response regulator receiver domain HPY04_RS14280 PF00158 Sigma-54 interaction domain HPY04_RS14295 PF01266 FAD dependent oxidoreductase HPY04_RS14300 PF00041 Fibronectin type III domain HPY04_RS14300 PF12561 ToxR activated gene A lipoprotein domain HPY04_RS14305 PF01327 Polypeptide deformylase HPY04_RS14315 PF03334 Na+/H+ antiporter subunit HPY04_RS14320 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HPY04_RS14340 PF13244 Domain of unknown function (DUF4040) HPY04_RS14340 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HPY04_RS14340 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY04_RS14340 PF00361 Proton-conducting membrane transporter HPY04_RS14350 PF00582 Universal stress protein family HPY04_RS14355 PF03222 Tryptophan/tyrosine permease family HPY04_RS14360 PF01212 Beta-eliminating lyase HPY04_RS14370 PF12843 Putative quorum-sensing-regulated virulence factor HPY04_RS14380 PF00563 EAL domain HPY04_RS14380 PF08448 PAS fold HPY04_RS14380 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS14385 PF00313 'Cold-shock' DNA-binding domain HPY04_RS14400 PF13519 von Willebrand factor type A domain HPY04_RS14400 PF07584 Aerotolerance regulator N-terminal HPY04_RS14415 PF01882 Protein of unknown function DUF58 HPY04_RS14420 PF17863 AAA lid domain HPY04_RS14420 PF07726 ATPase family associated with various cellular activities (AAA) HPY04_RS14425 PF02743 Cache domain HPY04_RS14425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS14425 PF00672 HAMP domain HPY04_RS14440 PF07670 Nucleoside recognition HPY04_RS14440 PF07662 Na+ dependent nucleoside transporter C-terminus HPY04_RS14440 PF01773 Na+ dependent nucleoside transporter N-terminus HPY04_RS14445 PF07687 Peptidase dimerisation domain HPY04_RS14445 PF01546 Peptidase family M20/M25/M40 HPY04_RS14455 PF01590 GAF domain HPY04_RS14455 PF00158 Sigma-54 interaction domain HPY04_RS14460 PF00175 Oxidoreductase NAD-binding domain HPY04_RS14460 PF00970 Oxidoreductase FAD-binding domain HPY04_RS14460 PF00042 Globin HPY04_RS14465 PF00313 'Cold-shock' DNA-binding domain HPY04_RS14470 PF03889 Alternative ribosome-rescue factor A HPY04_RS14485 PF00072 Response regulator receiver domain HPY04_RS14495 PF01256 Carbohydrate kinase HPY04_RS14495 PF03853 YjeF-related protein N-terminus HPY04_RS14500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY04_RS14500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY04_RS14510 PF07885 Ion channel HPY04_RS14520 PF00478 IMP dehydrogenase / GMP reductase domain HPY04_RS14530 PF02899 Phage integrase, N-terminal SAM-like domain HPY04_RS14530 PF00589 Phage integrase family HPY04_RS14535 PF00004 ATPase family associated with various cellular activities (AAA) HPY04_RS14585 PF05840 Bacteriophage replication gene A protein (GPA) HPY04_RS14740 PF02583 Metal-sensitive transcriptional repressor HPY04_RS14750 PF13493 Domain of unknown function (DUF4118) HPY04_RS14750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS14750 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS14750 PF02702 Osmosensitive K+ channel His kinase sensor domain HPY04_RS14755 PF00072 Response regulator receiver domain HPY04_RS14755 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS14765 PF02254 TrkA-N domain HPY04_RS14765 PF02080 TrkA-C domain HPY04_RS14795 PF00271 Helicase conserved C-terminal domain HPY04_RS14795 PF00270 DEAD/DEAH box helicase HPY04_RS14800 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY04_RS14805 PF02540 NAD synthase HPY04_RS14810 PF01467 Cytidylyltransferase-like HPY04_RS14815 PF11849 Domain of unknown function (DUF3369) HPY04_RS14820 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS14820 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY04_RS14820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS14830 PF03553 Na+/H+ antiporter family HPY04_RS14835 PF07690 Major Facilitator Superfamily HPY04_RS14850 PF00657 GDSL-like Lipase/Acylhydrolase HPY04_RS14855 PF12563 Hemolytic toxin N terminal HPY04_RS14855 PF07968 Leukocidin/Hemolysin toxin family HPY04_RS14855 PF16458 Beta-prism lectin HPY04_RS14860 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS14860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS14860 PF00672 HAMP domain HPY04_RS14865 PF00561 alpha/beta hydrolase fold HPY04_RS14870 PF03280 Proteobacterial lipase chaperone protein HPY04_RS14875 PF00801 PKD domain HPY04_RS14875 PF05547 Immune inhibitor A peptidase M6 HPY04_RS14895 PF01032 FecCD transport family HPY04_RS14900 PF01032 FecCD transport family HPY04_RS14905 PF00005 ABC transporter HPY04_RS14910 PF12833 Helix-turn-helix domain HPY04_RS14915 PF07715 TonB-dependent Receptor Plug Domain HPY04_RS14915 PF00593 TonB dependent receptor HPY04_RS14925 PF00871 Acetokinase family HPY04_RS14940 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS14940 PF00672 HAMP domain HPY04_RS14945 PF00072 Response regulator receiver domain HPY04_RS14945 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS14955 PF01261 Xylose isomerase-like TIM barrel HPY04_RS14960 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY04_RS14970 PF00596 Class II Aldolase and Adducin N-terminal domain HPY04_RS14975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY04_RS14980 PF03611 PTS system sugar-specific permease component HPY04_RS14985 PF08220 DeoR-like helix-turn-helix domain HPY04_RS14985 PF00455 DeoR C terminal sensor domain HPY04_RS15000 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS15015 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS15015 PF00072 Response regulator receiver domain HPY04_RS15020 PF00672 HAMP domain HPY04_RS15020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS15020 PF14827 Double sensory domain of two-component sensor kinase HPY04_RS15020 PF13426 PAS domain HPY04_RS15020 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS15030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS15030 PF00672 HAMP domain HPY04_RS15030 PF02743 Cache domain HPY04_RS15035 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY04_RS15040 PF07943 Penicillin-binding protein 5, C-terminal domain HPY04_RS15040 PF00768 D-alanyl-D-alanine carboxypeptidase HPY04_RS15055 PF00194 Eukaryotic-type carbonic anhydrase HPY04_RS15060 PF02347 Glycine cleavage system P-protein HPY04_RS15065 PF01597 Glycine cleavage H-protein HPY04_RS15070 PF00464 Serine hydroxymethyltransferase HPY04_RS15080 PF01571 Aminomethyltransferase folate-binding domain HPY04_RS15080 PF08669 Glycine cleavage T-protein C-terminal barrel domain HPY04_RS15085 PF02824 TGS domain HPY04_RS15085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY04_RS15085 PF03129 Anticodon binding domain HPY04_RS15085 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY04_RS15090 PF05198 Translation initiation factor IF-3, N-terminal domain HPY04_RS15090 PF00707 Translation initiation factor IF-3, C-terminal domain HPY04_RS15095 PF01632 Ribosomal protein L35 HPY04_RS15100 PF00453 Ribosomal protein L20 HPY04_RS15105 PF13495 Phage integrase, N-terminal SAM-like domain HPY04_RS15105 PF00589 Phage integrase family HPY04_RS15110 PF08212 Lipocalin-like domain HPY04_RS15145 PF13302 Acetyltransferase (GNAT) domain HPY04_RS15170 PF08212 Lipocalin-like domain HPY04_RS15210 PF00583 Acetyltransferase (GNAT) family HPY04_RS15285 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY04_RS15510 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HPY04_RS15560 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HPY04_RS15565 PF01636 Phosphotransferase enzyme family HPY04_RS15570 PF13302 Acetyltransferase (GNAT) domain HPY04_RS15605 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS15625 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HPY04_RS15630 PF01381 Helix-turn-helix HPY04_RS15710 PF12464 Maltose acetyltransferase HPY04_RS15710 PF14602 Hexapeptide repeat of succinyl-transferase HPY04_RS15720 PF00561 alpha/beta hydrolase fold HPY04_RS15760 PF13302 Acetyltransferase (GNAT) domain HPY04_RS15810 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HPY04_RS15820 PF01966 HD domain HPY04_RS15830 PF09722 Protein of unknown function (DUF2384) HPY04_RS15840 PF02016 LD-carboxypeptidase N-terminal domain HPY04_RS15840 PF17676 LD-carboxypeptidase C-terminal domain HPY04_RS15850 PF13597 Anaerobic ribonucleoside-triphosphate reductase HPY04_RS15850 PF03477 ATP cone domain HPY04_RS15860 PF00155 Aminotransferase class I and II HPY04_RS15865 PF08443 RimK-like ATP-grasp domain HPY04_RS15865 PF18030 RimK PreATP-grasp domain HPY04_RS15870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY04_RS15870 PF02378 Phosphotransferase system, EIIC HPY04_RS15875 PF00294 pfkB family carbohydrate kinase HPY04_RS15880 PF00381 PTS HPr component phosphorylation site HPY04_RS15880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY04_RS15885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY04_RS15885 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS15890 PF00149 Calcineurin-like phosphoesterase HPY04_RS15890 PF12320 Type 5 capsule protein repressor C-terminal domain HPY04_RS15895 PF13476 AAA domain HPY04_RS15900 PF00072 Response regulator receiver domain HPY04_RS15900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS15905 PF00155 Aminotransferase class I and II HPY04_RS15915 PF00654 Voltage gated chloride channel HPY04_RS15920 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPY04_RS15920 PF07683 Cobalamin synthesis protein cobW C-terminal domain HPY04_RS15925 PF01926 50S ribosome-binding GTPase HPY04_RS15930 PF02705 K+ potassium transporter HPY04_RS15935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPY04_RS15935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY04_RS15935 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPY04_RS15935 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPY04_RS15935 PF10371 Domain of unknown function HPY04_RS15940 PF13493 Domain of unknown function (DUF4118) HPY04_RS15940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS15940 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS15940 PF02702 Osmosensitive K+ channel His kinase sensor domain HPY04_RS15945 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS15945 PF00072 Response regulator receiver domain HPY04_RS15950 PF02416 mttA/Hcf106 family HPY04_RS15955 PF09335 SNARE associated Golgi protein HPY04_RS15965 PF00563 EAL domain HPY04_RS15965 PF10388 EAL-domain associated signalling protein domain HPY04_RS15975 PF01292 Prokaryotic cytochrome b561 HPY04_RS15980 PF04264 YceI-like domain HPY04_RS15985 PF01226 Formate/nitrite transporter HPY04_RS15990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS15990 PF03466 LysR substrate binding domain HPY04_RS15995 PF06496 Protein of unknown function (DUF1097) HPY04_RS16000 PF11398 Protein of unknown function (DUF2813) HPY04_RS16005 PF00149 Calcineurin-like phosphoesterase HPY04_RS16005 PF02872 5'-nucleotidase, C-terminal domain HPY04_RS16010 PF03741 Integral membrane protein TerC family HPY04_RS16020 PF08274 PhnA Zinc-Ribbon HPY04_RS16020 PF03831 PhnA domain HPY04_RS16050 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS16050 PF17151 Periplasmic sensor domain HPY04_RS16070 PF17158 Membrane-associated sensor, integral membrane domain HPY04_RS16070 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS16085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY04_RS16085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY04_RS16085 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HPY04_RS16090 PF02233 NAD(P) transhydrogenase beta subunit HPY04_RS16100 PF00072 Response regulator receiver domain HPY04_RS16100 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS16115 PF03701 Uncharacterised protein family (UPF0181) HPY04_RS16185 PF01253 Translation initiation factor SUI1 HPY04_RS16195 PF01820 D-ala D-ala ligase N-terminus HPY04_RS16195 PF07478 D-ala D-ala ligase C-terminus HPY04_RS16205 PF00583 Acetyltransferase (GNAT) family HPY04_RS16205 PF13607 Succinyl-CoA ligase like flavodoxin domain HPY04_RS16205 PF13380 CoA binding domain HPY04_RS16210 PF03466 LysR substrate binding domain HPY04_RS16210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS16215 PF00593 TonB dependent receptor HPY04_RS16215 PF07715 TonB-dependent Receptor Plug Domain HPY04_RS16220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY04_RS16220 PF12793 Sugar transport-related sRNA regulator N-term HPY04_RS16230 PF03061 Thioesterase superfamily HPY04_RS16250 PF02798 Glutathione S-transferase, N-terminal domain HPY04_RS16250 PF00043 Glutathione S-transferase, C-terminal domain HPY04_RS16265 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS16265 PF12804 MobA-like NTP transferase domain HPY04_RS16265 PF03479 Plants and Prokaryotes Conserved (PCC) domain HPY04_RS16270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS16270 PF00005 ABC transporter HPY04_RS16275 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS16275 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY04_RS16285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY04_RS16315 PF07702 UTRA domain HPY04_RS16315 PF00392 Bacterial regulatory proteins, gntR family HPY04_RS16320 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS16325 PF00005 ABC transporter HPY04_RS16335 PF00266 Aminotransferase class-V HPY04_RS16345 PF13419 Haloacid dehalogenase-like hydrolase HPY04_RS16350 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY04_RS16350 PF14760 Rnk N-terminus HPY04_RS16355 PF00128 Alpha amylase, catalytic domain HPY04_RS16355 PF00686 Starch binding domain HPY04_RS16360 PF00005 ABC transporter HPY04_RS16360 PF17912 MalK OB fold domain HPY04_RS16360 PF03459 TOBE domain HPY04_RS16370 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS16370 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HPY04_RS16385 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS16390 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS16395 PF00128 Alpha amylase, catalytic domain HPY04_RS16395 PF16657 Maltogenic Amylase, C-terminal domain HPY04_RS16395 PF02903 Alpha amylase, N-terminal ig-like domain HPY04_RS16410 PF13419 Haloacid dehalogenase-like hydrolase HPY04_RS16415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS16415 PF03466 LysR substrate binding domain HPY04_RS16430 PF01741 Large-conductance mechanosensitive channel, MscL HPY04_RS16435 PF01268 Formate--tetrahydrofolate ligase HPY04_RS16440 PF01641 SelR domain HPY04_RS16440 PF01625 Peptide methionine sulfoxide reductase HPY04_RS16445 PF01227 GTP cyclohydrolase I HPY04_RS16450 PF03453 MoeA N-terminal region (domain I and II) HPY04_RS16450 PF03454 MoeA C-terminal region (domain IV) HPY04_RS16450 PF00994 Probable molybdopterin binding domain HPY04_RS16455 PF00899 ThiF family HPY04_RS16465 PF00581 Rhodanese-like domain HPY04_RS16470 PF04198 Putative sugar-binding domain HPY04_RS16475 PF00923 Transaldolase/Fructose-6-phosphate aldolase HPY04_RS16480 PF00456 Transketolase, thiamine diphosphate binding domain HPY04_RS16480 PF02780 Transketolase, C-terminal domain HPY04_RS16480 PF02779 Transketolase, pyrimidine binding domain HPY04_RS16495 PF14706 Transposase DNA-binding HPY04_RS16495 PF02281 Transposase Tn5 dimerisation domain HPY04_RS16495 PF01609 Transposase DDE domain HPY04_RS16510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY04_RS16510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY04_RS16520 PF00293 NUDIX domain HPY04_RS16525 PF06942 GlpM protein HPY04_RS16535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS16535 PF03466 LysR substrate binding domain HPY04_RS16540 PF03992 Antibiotic biosynthesis monooxygenase HPY04_RS16545 PF00881 Nitroreductase family HPY04_RS16550 PF00873 AcrB/AcrD/AcrF family HPY04_RS16565 PF04143 Sulphur transport HPY04_RS16580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY04_RS16580 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS16625 PF07715 TonB-dependent Receptor Plug Domain HPY04_RS16625 PF00593 TonB dependent receptor HPY04_RS16630 PF00072 Response regulator receiver domain HPY04_RS16630 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS16640 PF02378 Phosphotransferase system, EIIC HPY04_RS16640 PF00367 phosphotransferase system, EIIB HPY04_RS16650 PF08244 Glycosyl hydrolases family 32 C terminal HPY04_RS16650 PF00251 Glycosyl hydrolases family 32 N-terminal domain HPY04_RS16655 PF00294 pfkB family carbohydrate kinase HPY04_RS16660 PF01266 FAD dependent oxidoreductase HPY04_RS16660 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HPY04_RS16665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS16665 PF00672 HAMP domain HPY04_RS16670 PF13488 Glycine zipper HPY04_RS16670 PF00691 OmpA family HPY04_RS16675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY04_RS16675 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY04_RS16680 PF13419 Haloacid dehalogenase-like hydrolase HPY04_RS16685 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS16685 PF00672 HAMP domain HPY04_RS16685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS16690 PF03606 C4-dicarboxylate anaerobic carrier HPY04_RS16695 PF03313 Serine dehydratase alpha chain HPY04_RS16695 PF03315 Serine dehydratase beta chain HPY04_RS16700 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS16700 PF00072 Response regulator receiver domain HPY04_RS16705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS16705 PF07730 Histidine kinase HPY04_RS16705 PF00672 HAMP domain HPY04_RS16705 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HPY04_RS16710 PF12838 4Fe-4S dicluster domain HPY04_RS16710 PF13187 4Fe-4S dicluster domain HPY04_RS16720 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY04_RS16720 PF01568 Molydopterin dinucleotide binding domain HPY04_RS16720 PF00384 Molybdopterin oxidoreductase HPY04_RS16725 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HPY04_RS16730 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY04_RS16740 PF01966 HD domain HPY04_RS16745 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS16745 PF00072 Response regulator receiver domain HPY04_RS16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS16750 PF07730 Histidine kinase HPY04_RS16750 PF05231 MASE1 HPY04_RS16755 PF07690 Major Facilitator Superfamily HPY04_RS16765 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS16770 PF00005 ABC transporter HPY04_RS16770 PF08402 TOBE domain HPY04_RS16775 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HPY04_RS16785 PF00108 Thiolase, N-terminal domain HPY04_RS16785 PF02803 Thiolase, C-terminal domain HPY04_RS16790 PF00106 short chain dehydrogenase HPY04_RS16795 PF02355 Protein export membrane protein HPY04_RS16795 PF07549 SecD/SecF GG Motif HPY04_RS16800 PF02355 Protein export membrane protein HPY04_RS16800 PF13721 SecD export protein N-terminal TM region HPY04_RS16800 PF07549 SecD/SecF GG Motif HPY04_RS16815 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS16815 PF17158 Membrane-associated sensor, integral membrane domain HPY04_RS16820 PF00483 Nucleotidyl transferase HPY04_RS16825 PF06483 Chitinase C HPY04_RS16825 PF00704 Glycosyl hydrolases family 18 HPY04_RS16830 PF00465 Iron-containing alcohol dehydrogenase HPY04_RS16840 PF02954 Bacterial regulatory protein, Fis family HPY04_RS16840 PF00072 Response regulator receiver domain HPY04_RS16840 PF14532 Sigma-54 interaction domain HPY04_RS16845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS16845 PF02743 Cache domain HPY04_RS16845 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS16855 PF07690 Major Facilitator Superfamily HPY04_RS16860 PF00224 Pyruvate kinase, barrel domain HPY04_RS16860 PF02887 Pyruvate kinase, alpha/beta domain HPY04_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS16865 PF00672 HAMP domain HPY04_RS16865 PF01627 Hpt domain HPY04_RS16865 PF00072 Response regulator receiver domain HPY04_RS16865 PF17149 Periplasmic sensor domain found in signal transduction proteins HPY04_RS16865 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS16870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY04_RS16875 PF02142 MGS-like domain HPY04_RS16880 PF00857 Isochorismatase family HPY04_RS16885 PF01219 Prokaryotic diacylglycerol kinase HPY04_RS16890 PF13361 UvrD-like helicase C-terminal domain HPY04_RS16890 PF00580 UvrD/REP helicase N-terminal domain HPY04_RS16890 PF12462 DNA helicase IV / RNA helicase N terminal HPY04_RS16895 PF12805 FUSC-like inner membrane protein yccS HPY04_RS16900 PF08448 PAS fold HPY04_RS16900 PF00072 Response regulator receiver domain HPY04_RS16900 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS16900 PF13188 PAS domain HPY04_RS16900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS16925 PF00005 ABC transporter HPY04_RS16925 PF03459 TOBE domain HPY04_RS16930 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS16940 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY04_RS16940 PF07685 CobB/CobQ-like glutamine amidotransferase domain HPY04_RS16975 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS16975 PF09308 LuxQ, periplasmic HPY04_RS16975 PF00072 Response regulator receiver domain HPY04_RS16980 PF13407 Periplasmic binding protein domain HPY04_RS16990 PF01541 GIY-YIG catalytic domain HPY04_RS16995 PF04337 Protein of unknown function, DUF480 HPY04_RS17005 PF04363 Protein of unknown function (DUF496) HPY04_RS17015 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HPY04_RS17015 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HPY04_RS17020 PF00230 Major intrinsic protein HPY04_RS17025 PF01266 FAD dependent oxidoreductase HPY04_RS17025 PF04324 BFD-like [2Fe-2S] binding domain HPY04_RS17030 PF00890 FAD binding domain HPY04_RS17035 PF13183 4Fe-4S dicluster domain HPY04_RS17035 PF02754 Cysteine-rich domain HPY04_RS17040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY04_RS17040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY04_RS17045 PF00085 Thioredoxin HPY04_RS17050 PF07690 Major Facilitator Superfamily HPY04_RS17075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS17075 PF03466 LysR substrate binding domain HPY04_RS17080 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS17085 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS17090 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY04_RS17095 PF00005 ABC transporter HPY04_RS17105 PF05762 VWA domain containing CoxE-like protein HPY04_RS17110 PF07728 AAA domain (dynein-related subfamily) HPY04_RS17110 PF12592 Protein of unknown function (DUF3763) HPY04_RS17110 PF17868 AAA lid domain HPY04_RS17115 PF00293 NUDIX domain HPY04_RS17120 PF01212 Beta-eliminating lyase HPY04_RS17125 PF00034 Cytochrome c HPY04_RS17130 PF00440 Bacterial regulatory proteins, tetR family HPY04_RS17130 PF08361 MAATS-type transcriptional repressor, C-terminal region HPY04_RS17135 PF00270 DEAD/DEAH box helicase HPY04_RS17135 PF00271 Helicase conserved C-terminal domain HPY04_RS17140 PF04336 Acyl carrier protein phosphodiesterase HPY04_RS17145 PF03222 Tryptophan/tyrosine permease family HPY04_RS17150 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS17150 PF00672 HAMP domain HPY04_RS17150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS17155 PF16363 GDP-mannose 4,6 dehydratase HPY04_RS17160 PF03746 LamB/YcsF family HPY04_RS17165 PF02682 Carboxyltransferase domain, subdomain C and D HPY04_RS17170 PF02626 Carboxyltransferase domain, subdomain A and B HPY04_RS17180 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY04_RS17180 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY04_RS17190 PF00005 ABC transporter HPY04_RS17195 PF13472 GDSL-like Lipase/Acylhydrolase family HPY04_RS17200 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY04_RS17200 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY04_RS17200 PF07055 Enoyl reductase FAD binding domain HPY04_RS17205 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS17205 PF00498 FHA domain HPY04_RS17205 PF00563 EAL domain HPY04_RS17215 PF00226 DnaJ domain HPY04_RS17215 PF01556 DnaJ C terminal domain HPY04_RS17215 PF00684 DnaJ central domain HPY04_RS17230 PF13419 Haloacid dehalogenase-like hydrolase HPY04_RS17245 PF00294 pfkB family carbohydrate kinase HPY04_RS17250 PF00884 Sulfatase HPY04_RS17260 PF00270 DEAD/DEAH box helicase HPY04_RS17260 PF03880 DbpA RNA binding domain HPY04_RS17260 PF00271 Helicase conserved C-terminal domain HPY04_RS17265 PF00575 S1 RNA binding domain HPY04_RS17265 PF00773 RNB domain HPY04_RS17265 PF08206 Ribonuclease B OB domain HPY04_RS17275 PF12849 PBP superfamily domain HPY04_RS17280 PF01575 MaoC like domain HPY04_RS17285 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HPY04_RS17290 PF18416 N-acetylglucosamine binding protein domain 2 HPY04_RS17290 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HPY04_RS17295 PF01447 Thermolysin metallopeptidase, catalytic domain HPY04_RS17295 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY04_RS17295 PF03413 Peptidase propeptide and YPEB domain HPY04_RS17295 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY04_RS17295 PF04151 Bacterial pre-peptidase C-terminal domain HPY04_RS17300 PF04389 Peptidase family M28 HPY04_RS17300 PF04151 Bacterial pre-peptidase C-terminal domain HPY04_RS17305 PF00491 Arginase family HPY04_RS17310 PF17944 Arginine decarboxylase C-terminal helical extension HPY04_RS17310 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY04_RS17310 PF17810 Arginine decarboxylase helical bundle domain HPY04_RS17320 PF01769 Divalent cation transporter HPY04_RS17320 PF00571 CBS domain HPY04_RS17320 PF03448 MgtE intracellular N domain HPY04_RS17325 PF00166 Chaperonin 10 Kd subunit HPY04_RS17330 PF00118 TCP-1/cpn60 chaperonin family HPY04_RS17340 PF13840 ACT domain HPY04_RS17340 PF00696 Amino acid kinase family HPY04_RS17345 PF06339 Ectoine synthase HPY04_RS17350 PF00202 Aminotransferase class-III HPY04_RS17355 PF00583 Acetyltransferase (GNAT) family HPY04_RS17360 PF01329 Pterin 4 alpha carbinolamine dehydratase HPY04_RS17365 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HPY04_RS17370 PF13193 AMP-binding enzyme C-terminal domain HPY04_RS17370 PF00501 AMP-binding enzyme HPY04_RS17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS17390 PF03466 LysR substrate binding domain HPY04_RS17400 PF00892 EamA-like transporter family HPY04_RS17405 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HPY04_RS17405 PF00132 Bacterial transferase hexapeptide (six repeats) HPY04_RS17405 PF14602 Hexapeptide repeat of succinyl-transferase HPY04_RS17410 PF00571 CBS domain HPY04_RS17410 PF03471 Transporter associated domain HPY04_RS17410 PF01595 Cyclin M transmembrane N-terminal domain HPY04_RS17415 PF02566 OsmC-like protein HPY04_RS17420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY04_RS17430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY04_RS17430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY04_RS17450 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY04_RS17455 PF13520 Amino acid permease HPY04_RS17460 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS17470 PF00072 Response regulator receiver domain HPY04_RS17470 PF04397 LytTr DNA-binding domain HPY04_RS17475 PF07694 5TMR of 5TMR-LYT HPY04_RS17475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS17475 PF13492 GAF domain HPY04_RS17475 PF06580 Histidine kinase HPY04_RS17495 PF00005 ABC transporter HPY04_RS17505 PF00248 Aldo/keto reductase family HPY04_RS17510 PF00128 Alpha amylase, catalytic domain HPY04_RS17520 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY04_RS17525 PF12262 Bacterial virulence factor lipase N-terminal HPY04_RS17530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS17530 PF08447 PAS fold HPY04_RS17530 PF13426 PAS domain HPY04_RS17535 PF01447 Thermolysin metallopeptidase, catalytic domain HPY04_RS17535 PF03413 Peptidase propeptide and YPEB domain HPY04_RS17535 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY04_RS17535 PF04151 Bacterial pre-peptidase C-terminal domain HPY04_RS17535 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY04_RS17545 PF03922 OmpW family HPY04_RS17555 PF00768 D-alanyl-D-alanine carboxypeptidase HPY04_RS17560 PF17876 Cold shock domain HPY04_RS17560 PF08461 Ribonuclease R winged-helix domain HPY04_RS17560 PF08206 Ribonuclease B OB domain HPY04_RS17560 PF00773 RNB domain HPY04_RS17560 PF00575 S1 RNA binding domain HPY04_RS17565 PF00313 'Cold-shock' DNA-binding domain HPY04_RS17575 PF00291 Pyridoxal-phosphate dependent enzyme HPY04_RS17580 PF03466 LysR substrate binding domain HPY04_RS17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS17595 PF03193 RsgA GTPase HPY04_RS17610 PF08240 Alcohol dehydrogenase GroES-like domain HPY04_RS17610 PF00107 Zinc-binding dehydrogenase HPY04_RS17630 PF18650 Immunomodulating metalloprotease N-terminal domain HPY04_RS17630 PF18642 Immunomodulating metalloprotease helical domain HPY04_RS17630 PF13402 Peptidase M60, enhancin and enhancin-like HPY04_RS17635 PF00313 'Cold-shock' DNA-binding domain HPY04_RS17640 PF17876 Cold shock domain HPY04_RS17640 PF00773 RNB domain HPY04_RS17640 PF00575 S1 RNA binding domain HPY04_RS17640 PF08206 Ribonuclease B OB domain HPY04_RS17640 PF08461 Ribonuclease R winged-helix domain HPY04_RS17755 PF13289 SIR2-like domain HPY04_RS17760 PF13438 Domain of unknown function (DUF4113) HPY04_RS17760 PF00817 impB/mucB/samB family HPY04_RS17760 PF11799 impB/mucB/samB family C-terminal domain HPY04_RS17760 PF11798 IMS family HHH motif HPY04_RS17765 PF00717 Peptidase S24-like HPY04_RS17775 PF06965 Na+/H+ antiporter 1 HPY04_RS17785 PF00313 'Cold-shock' DNA-binding domain HPY04_RS17810 PF03354 Phage Terminase HPY04_RS17820 PF01381 Helix-turn-helix HPY04_RS17820 PF00717 Peptidase S24-like HPY04_RS17835 PF00589 Phage integrase family HPY04_RS17835 PF12167 Arm DNA-binding domain HPY04_RS17860 PF08240 Alcohol dehydrogenase GroES-like domain HPY04_RS17860 PF00107 Zinc-binding dehydrogenase HPY04_RS17865 PF00155 Aminotransferase class I and II HPY04_RS17870 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY04_RS17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS17875 PF03466 LysR substrate binding domain HPY04_RS17880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY04_RS17905 PF01966 HD domain HPY04_RS17910 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HPY04_RS17910 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HPY04_RS17915 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY04_RS17920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY04_RS17920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HPY04_RS17945 PF02595 Glycerate kinase family HPY04_RS17950 PF02447 GntP family permease HPY04_RS17955 PF17853 GGDEF-like domain HPY04_RS17955 PF13556 PucR C-terminal helix-turn-helix domain HPY04_RS17955 PF05651 Putative sugar diacid recognition HPY04_RS17960 PF00672 HAMP domain HPY04_RS17960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS17965 PF01243 Pyridoxamine 5'-phosphate oxidase HPY04_RS17970 PF06228 Haem utilisation ChuX/HutX HPY04_RS17975 PF04055 Radical SAM superfamily HPY04_RS17980 PF03544 Gram-negative bacterial TonB protein C-terminal HPY04_RS17985 PF01618 MotA/TolQ/ExbB proton channel family HPY04_RS17990 PF02472 Biopolymer transport protein ExbD/TolR HPY04_RS17995 PF01497 Periplasmic binding protein HPY04_RS18000 PF01032 FecCD transport family HPY04_RS18005 PF00005 ABC transporter HPY04_RS18035 PF02743 Cache domain HPY04_RS18035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS18035 PF00672 HAMP domain HPY04_RS18040 PF03476 MOSC N-terminal beta barrel domain HPY04_RS18040 PF03473 MOSC domain HPY04_RS18040 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY04_RS18040 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY04_RS18040 PF03476 MOSC N-terminal beta barrel domain HPY04_RS18040 PF03473 MOSC domain HPY04_RS18045 PF01979 Amidohydrolase family HPY04_RS18050 PF05958 tRNA (Uracil-5-)-methyltransferase HPY04_RS18055 PF05661 Protein of unknown function (DUF808) HPY04_RS18065 PF00313 'Cold-shock' DNA-binding domain HPY04_RS18090 PF08448 PAS fold HPY04_RS18090 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS18095 PF00455 DeoR C terminal sensor domain HPY04_RS18095 PF08220 DeoR-like helix-turn-helix domain HPY04_RS18110 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS18115 PF14785 Maltose transport system permease protein MalF P2 domain HPY04_RS18115 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS18120 PF01547 Bacterial extracellular solute-binding protein HPY04_RS18125 PF00005 ABC transporter HPY04_RS18125 PF08402 TOBE domain HPY04_RS18130 PF13302 Acetyltransferase (GNAT) domain HPY04_RS18145 PF01906 Putative heavy-metal-binding HPY04_RS18150 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS18160 PF01584 CheW-like domain HPY04_RS18160 PF00072 Response regulator receiver domain HPY04_RS18165 PF01047 MarR family HPY04_RS18170 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS18185 PF00563 EAL domain HPY04_RS18185 PF03707 Bacterial signalling protein N terminal repeat HPY04_RS18185 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS18205 PF03466 LysR substrate binding domain HPY04_RS18210 PF00990 Diguanylate cyclase, GGDEF domain HPY04_RS18210 PF00563 EAL domain HPY04_RS18220 PF02678 Pirin HPY04_RS18220 PF05726 Pirin C-terminal cupin domain HPY04_RS18225 PF06865 Pyrimidine/purine nucleoside phosphorylase HPY04_RS18235 PF07690 Major Facilitator Superfamily HPY04_RS18240 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY04_RS18240 PF13654 AAA domain HPY04_RS18250 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS18250 PF00005 ABC transporter HPY04_RS18255 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY04_RS18260 PF00672 HAMP domain HPY04_RS18260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS18260 PF17200 Single Cache domain 2 HPY04_RS18270 PF03466 LysR substrate binding domain HPY04_RS18270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS18280 PF02652 L-lactate permease HPY04_RS18285 PF01070 FMN-dependent dehydrogenase HPY04_RS18295 PF03618 Kinase/pyrophosphorylase HPY04_RS18300 PF00391 PEP-utilising enzyme, mobile domain HPY04_RS18300 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HPY04_RS18300 PF02896 PEP-utilising enzyme, TIM barrel domain HPY04_RS18305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS18305 PF08447 PAS fold HPY04_RS18310 PF01554 MatE HPY04_RS18315 PF00933 Glycosyl hydrolase family 3 N terminal domain HPY04_RS18315 PF14310 Fibronectin type III-like domain HPY04_RS18315 PF01915 Glycosyl hydrolase family 3 C-terminal domain HPY04_RS18325 PF02264 LamB porin HPY04_RS18330 PF00722 Glycosyl hydrolases family 16 HPY04_RS18340 PF00356 Bacterial regulatory proteins, lacI family HPY04_RS18350 PF00005 ABC transporter HPY04_RS18350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS18355 PF00005 ABC transporter HPY04_RS18355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS18360 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS18365 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS18370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY04_RS18380 PF00271 Helicase conserved C-terminal domain HPY04_RS18380 PF00270 DEAD/DEAH box helicase HPY04_RS18385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS18385 PF03466 LysR substrate binding domain HPY04_RS18395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY04_RS18405 PF00664 ABC transporter transmembrane region HPY04_RS18405 PF00005 ABC transporter HPY04_RS18415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY04_RS18425 PF01810 LysE type translocator HPY04_RS18430 PF12833 Helix-turn-helix domain HPY04_RS18445 PF01557 Fumarylacetoacetate (FAA) hydrolase family HPY04_RS18450 PF01047 MarR family HPY04_RS18455 PF02566 OsmC-like protein HPY04_RS18460 PF13609 Gram-negative porin HPY04_RS18465 PF00892 EamA-like transporter family HPY04_RS18470 PF00462 Glutaredoxin HPY04_RS18475 PF07670 Nucleoside recognition HPY04_RS18480 PF07670 Nucleoside recognition HPY04_RS18485 PF03600 Citrate transporter HPY04_RS18495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY04_RS18495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HPY04_RS18500 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY04_RS18500 PF06029 AlkA N-terminal domain HPY04_RS18505 PF07681 DoxX HPY04_RS18510 PF03466 LysR substrate binding domain HPY04_RS18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS18530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY04_RS18540 PF03466 LysR substrate binding domain HPY04_RS18540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS18545 PF00128 Alpha amylase, catalytic domain HPY04_RS18545 PF16657 Maltogenic Amylase, C-terminal domain HPY04_RS18560 PF07148 Maltose operon periplasmic protein precursor (MalM) HPY04_RS18565 PF02264 LamB porin HPY04_RS18570 PF00128 Alpha amylase, catalytic domain HPY04_RS18570 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY04_RS18580 PF12729 Four helix bundle sensory module for signal transduction HPY04_RS18580 PF00672 HAMP domain HPY04_RS18580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS18590 PF00672 HAMP domain HPY04_RS18590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS18600 PF00793 DAHP synthetase I family HPY04_RS18605 PF00005 ABC transporter HPY04_RS18610 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS18615 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY04_RS18620 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS18625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY04_RS18625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY04_RS18625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY04_RS18625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY04_RS18630 PF02378 Phosphotransferase system, EIIC HPY04_RS18630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY04_RS18630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY04_RS18635 PF01232 Mannitol dehydrogenase Rossmann domain HPY04_RS18635 PF08125 Mannitol dehydrogenase C-terminal domain HPY04_RS18640 PF05068 Mannitol repressor HPY04_RS18645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY04_RS18665 PF00892 EamA-like transporter family HPY04_RS18670 PF01047 MarR family HPY04_RS18680 PF00857 Isochorismatase family HPY04_RS18690 PF13460 NAD(P)H-binding HPY04_RS18695 PF03466 LysR substrate binding domain HPY04_RS18695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS18700 PF00672 HAMP domain HPY04_RS18700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS18700 PF02743 Cache domain HPY04_RS18705 PF00106 short chain dehydrogenase HPY04_RS18710 PF03466 LysR substrate binding domain HPY04_RS18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY04_RS18715 PF04013 Putative SAM-dependent RNA methyltransferase HPY04_RS18720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY04_RS18730 PF13520 Amino acid permease HPY04_RS18735 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY04_RS18735 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY04_RS18735 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY04_RS18745 PF00171 Aldehyde dehydrogenase family HPY04_RS18750 PF01037 Lrp/AsnC ligand binding domain HPY04_RS18755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS18755 PF00672 HAMP domain HPY04_RS18755 PF02743 Cache domain HPY04_RS18765 PF00474 Sodium:solute symporter family HPY04_RS18775 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HPY04_RS18775 PF01619 Proline dehydrogenase HPY04_RS18775 PF00171 Aldehyde dehydrogenase family HPY04_RS18775 PF14850 DNA-binding domain of Proline dehydrogenase HPY04_RS18780 PF12833 Helix-turn-helix domain HPY04_RS18790 PF03781 Sulfatase-modifying factor enzyme 1 HPY04_RS18795 PF00196 Bacterial regulatory proteins, luxR family HPY04_RS18795 PF00072 Response regulator receiver domain HPY04_RS18800 PF01243 Pyridoxamine 5'-phosphate oxidase HPY04_RS18800 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HPY04_RS18805 PF00529 HlyD membrane-fusion protein of T1SS HPY04_RS18820 PF03412 Peptidase C39 family HPY04_RS18820 PF00005 ABC transporter HPY04_RS18820 PF00664 ABC transporter transmembrane region HPY04_RS18830 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS18830 PF00072 Response regulator receiver domain HPY04_RS18840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS18840 PF00672 HAMP domain HPY04_RS18840 PF02743 Cache domain HPY04_RS18845 PF00072 Response regulator receiver domain HPY04_RS18845 PF01339 CheB methylesterase HPY04_RS18850 PF03975 CheD chemotactic sensory transduction HPY04_RS18855 PF01739 CheR methyltransferase, SAM binding domain HPY04_RS18855 PF03705 CheR methyltransferase, all-alpha domain HPY04_RS18860 PF02203 Tar ligand binding domain homologue HPY04_RS18860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY04_RS18860 PF00672 HAMP domain HPY04_RS18865 PF01584 CheW-like domain HPY04_RS18870 PF01584 CheW-like domain HPY04_RS18875 PF09078 CheY binding HPY04_RS18875 PF01584 CheW-like domain HPY04_RS18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS18875 PF01627 Hpt domain HPY04_RS18875 PF02895 Signal transducing histidine kinase, homodimeric domain HPY04_RS18880 PF00072 Response regulator receiver domain HPY04_RS18895 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS18900 PF00528 Binding-protein-dependent transport system inner membrane component HPY04_RS18900 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY04_RS18905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY04_RS18905 PF00005 ABC transporter HPY04_RS18910 PF08019 Phosphoethanolamine transferase EptA/EptB HPY04_RS18910 PF00884 Sulfatase HPY04_RS18915 PF00512 His Kinase A (phospho-acceptor) domain HPY04_RS18915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY04_RS18915 PF08521 Two-component sensor kinase N-terminal HPY04_RS18920 PF00486 Transcriptional regulatory protein, C terminal HPY04_RS18920 PF00072 Response regulator receiver domain HPY04_RS18940 PF00501 AMP-binding enzyme HPY04_RS18950 PF13718 GNAT acetyltransferase 2 HPY04_RS18950 PF05127 Helicase HPY04_RS18955 PF13416 Bacterial extracellular solute-binding protein