locus-tag class description HPY08_RS00005 PF00308 Bacterial dnaA protein HPY08_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix HPY08_RS00005 PF11638 DnaA N-terminal domain HPY08_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain HPY08_RS00010 PF02767 DNA polymerase III beta subunit, central domain HPY08_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain HPY08_RS00015 PF02463 RecF/RecN/SMC N terminal domain HPY08_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS00020 PF00204 DNA gyrase B HPY08_RS00020 PF01751 Toprim domain HPY08_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus HPY08_RS00020 PF18053 DNA gyrase B subunit insert domain HPY08_RS00030 PF00011 Hsp20/alpha crystallin family HPY08_RS00035 PF00155 Aminotransferase class I and II HPY08_RS00040 PF05746 DALR anticodon binding domain HPY08_RS00040 PF02092 Glycyl-tRNA synthetase beta subunit HPY08_RS00045 PF02091 Glycyl-tRNA synthetase alpha subunit HPY08_RS00050 PF01169 Uncharacterized protein family UPF0016 HPY08_RS00060 PF01206 Sulfurtransferase TusA HPY08_RS00070 PF08240 Alcohol dehydrogenase GroES-like domain HPY08_RS00070 PF00107 Zinc-binding dehydrogenase HPY08_RS00075 PF00585 C-terminal regulatory domain of Threonine dehydratase HPY08_RS00075 PF00291 Pyridoxal-phosphate dependent enzyme HPY08_RS00080 PF00920 Dehydratase family HPY08_RS00085 PF01063 Amino-transferase class IV HPY08_RS00095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY08_RS00095 PF00205 Thiamine pyrophosphate enzyme, central domain HPY08_RS00095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY08_RS00100 PF13335 Magnesium chelatase, subunit ChlI C-terminal HPY08_RS00100 PF01078 Magnesium chelatase, subunit ChlI HPY08_RS00105 PF01553 Acyltransferase HPY08_RS00110 PF01323 DSBA-like thioredoxin domain HPY08_RS00115 PF01636 Phosphotransferase enzyme family HPY08_RS00120 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase HPY08_RS00120 PF13746 4Fe-4S dicluster domain HPY08_RS00120 PF12801 4Fe-4S binding domain HPY08_RS00125 PF06288 Protein of unknown function (DUF1040) HPY08_RS00130 PF07070 SpoOM protein HPY08_RS00135 PF03006 Haemolysin-III related HPY08_RS00145 PF02386 Cation transport protein HPY08_RS00150 PF02254 TrkA-N domain HPY08_RS00150 PF02080 TrkA-C domain HPY08_RS00155 PF01029 NusB family HPY08_RS00155 PF01189 16S rRNA methyltransferase RsmB/F HPY08_RS00160 PF00551 Formyl transferase HPY08_RS00160 PF02911 Formyl transferase, C-terminal domain HPY08_RS00165 PF01327 Polypeptide deformylase HPY08_RS00170 PF01476 LysM domain HPY08_RS00175 PF02481 DNA recombination-mediator protein A HPY08_RS00175 PF17782 DprA winged helix domain HPY08_RS00180 PF04361 Protein of unknown function (DUF494) HPY08_RS00185 PF01396 Topoisomerase DNA binding C4 zinc finger HPY08_RS00190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain HPY08_RS00190 PF02222 ATP-grasp domain HPY08_RS00195 PF00731 AIR carboxylase HPY08_RS00200 PF01300 Telomere recombination HPY08_RS00205 PF01218 Coproporphyrinogen III oxidase HPY08_RS00210 PF18317 Shikimate 5'-dehydrogenase C-terminal domain HPY08_RS00210 PF08501 Shikimate dehydrogenase substrate binding domain HPY08_RS00210 PF01488 Shikimate / quinate 5-dehydrogenase HPY08_RS00220 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS00255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) HPY08_RS00260 PF01964 Radical SAM ThiC family HPY08_RS00260 PF13667 ThiC-associated domain HPY08_RS00265 PF02581 Thiamine monophosphate synthase HPY08_RS00270 PF00899 ThiF family HPY08_RS00275 PF02597 ThiS family HPY08_RS00280 PF05690 Thiazole biosynthesis protein ThiG HPY08_RS00285 PF04055 Radical SAM superfamily HPY08_RS00285 PF06968 Biotin and Thiamin Synthesis associated domain HPY08_RS00290 PF00557 Metallopeptidase family M24 HPY08_RS00290 PF01321 Creatinase/Prolidase N-terminal domain HPY08_RS00290 PF01321 Creatinase/Prolidase N-terminal domain HPY08_RS00290 PF00557 Metallopeptidase family M24 HPY08_RS00295 PF03466 LysR substrate binding domain HPY08_RS00295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS00300 PF07690 Major Facilitator Superfamily HPY08_RS00310 PF01037 Lrp/AsnC ligand binding domain HPY08_RS00315 PF00563 EAL domain HPY08_RS00315 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS00315 PF08448 PAS fold HPY08_RS00320 PF04445 Putative SAM-dependent methyltransferase HPY08_RS00330 PF00892 EamA-like transporter family HPY08_RS00335 PF00582 Universal stress protein family HPY08_RS00340 PF00210 Ferritin-like domain HPY08_RS00345 PF10625 Universal stress protein B (UspB) HPY08_RS00360 PF02646 RmuC family HPY08_RS00365 PF01209 ubiE/COQ5 methyltransferase family HPY08_RS00370 PF02036 SCP-2 sterol transfer family HPY08_RS00375 PF03109 ABC1 family HPY08_RS00380 PF02416 mttA/Hcf106 family HPY08_RS00385 PF02416 mttA/Hcf106 family HPY08_RS00390 PF00902 Sec-independent protein translocase protein (TatC) HPY08_RS00395 PF01554 MatE HPY08_RS00405 PF01726 LexA DNA binding domain HPY08_RS00405 PF00717 Peptidase S24-like HPY08_RS00410 PF01553 Acyltransferase HPY08_RS00415 PF01040 UbiA prenyltransferase family HPY08_RS00420 PF04345 Chorismate lyase HPY08_RS00425 PF03748 Flagellar basal body-associated protein FliL HPY08_RS00430 PF08447 PAS fold HPY08_RS00430 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS00430 PF13426 PAS domain HPY08_RS00435 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease HPY08_RS00435 PF01694 Rhomboid family HPY08_RS00440 PF00581 Rhodanese-like domain HPY08_RS00445 PF01026 TatD related DNase HPY08_RS00450 PF00490 Delta-aminolevulinic acid dehydratase HPY08_RS00460 PF01612 3'-5' exonuclease HPY08_RS00460 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY08_RS00460 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY08_RS00460 PF00476 DNA polymerase family A HPY08_RS00465 PF01926 50S ribosome-binding GTPase HPY08_RS00470 PF00034 Cytochrome c HPY08_RS00480 PF04220 Der GTPase activator (YihI) HPY08_RS00485 PF10675 Protein of unknown function (DUF2489) HPY08_RS00490 PF04055 Radical SAM superfamily HPY08_RS00490 PF06969 HemN C-terminal domain HPY08_RS00495 PF07719 Tetratricopeptide repeat HPY08_RS00495 PF07219 HemY protein N-terminus HPY08_RS00500 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase HPY08_RS00505 PF02602 Uroporphyrinogen-III synthase HemD HPY08_RS00510 PF03900 Porphobilinogen deaminase, C-terminal domain HPY08_RS00510 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain HPY08_RS00515 PF01295 Adenylate cyclase, class-I HPY08_RS00515 PF12633 Adenylate cyclase NT domain HPY08_RS00520 PF01491 Frataxin-like domain HPY08_RS00530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain HPY08_RS00530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY08_RS00535 PF01678 Diaminopimelate epimerase HPY08_RS00540 PF04340 Protein of unknown function, DUF484 HPY08_RS00545 PF00589 Phage integrase family HPY08_RS00545 PF02899 Phage integrase, N-terminal SAM-like domain HPY08_RS00550 PF13419 Haloacid dehalogenase-like hydrolase HPY08_RS00555 PF08495 FIST N domain HPY08_RS00555 PF00563 EAL domain HPY08_RS00555 PF10442 FIST C domain HPY08_RS00555 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS00575 PF12146 Serine aminopeptidase, S33 HPY08_RS00580 PF01810 LysE type translocator HPY08_RS00585 PF00563 EAL domain HPY08_RS00585 PF08668 HDOD domain HPY08_RS00590 PF00210 Ferritin-like domain HPY08_RS00625 PF02881 SRP54-type protein, helical bundle domain HPY08_RS00625 PF00448 SRP54-type protein, GTPase domain HPY08_RS00630 PF00005 ABC transporter HPY08_RS00635 PF18075 FtsX extracellular domain HPY08_RS00640 PF00140 Sigma-70 factor, region 1.2 HPY08_RS00640 PF04542 Sigma-70 region 2 HPY08_RS00640 PF04545 Sigma-70, region 4 HPY08_RS00645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY08_RS00645 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS00650 PF00440 Bacterial regulatory proteins, tetR family HPY08_RS00660 PF05958 tRNA (Uracil-5-)-methyltransferase HPY08_RS00665 PF07715 TonB-dependent Receptor Plug Domain HPY08_RS00665 PF00593 TonB dependent receptor HPY08_RS00670 PF04151 Bacterial pre-peptidase C-terminal domain HPY08_RS00670 PF05922 Peptidase inhibitor I9 HPY08_RS00670 PF00082 Subtilase family HPY08_RS00675 PF01177 Asp/Glu/Hydantoin racemase HPY08_RS00740 PF00962 Adenosine/AMP deaminase HPY08_RS00745 PF13188 PAS domain HPY08_RS00745 PF00563 EAL domain HPY08_RS00745 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS00745 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS00750 PF02954 Bacterial regulatory protein, Fis family HPY08_RS00750 PF00072 Response regulator receiver domain HPY08_RS00750 PF00158 Sigma-54 interaction domain HPY08_RS00755 PF00989 PAS fold HPY08_RS00755 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS00755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS00765 PF00120 Glutamine synthetase, catalytic domain HPY08_RS00765 PF03951 Glutamine synthetase, beta-Grasp domain HPY08_RS00785 PF03631 Virulence factor BrkB HPY08_RS00790 PF02580 D-Tyr-tRNA(Tyr) deacylase HPY08_RS00795 PF00583 Acetyltransferase (GNAT) family HPY08_RS00795 PF09500 Putative thioesterase (yiiD_Cterm) HPY08_RS00805 PF01293 Phosphoenolpyruvate carboxykinase HPY08_RS00810 PF01430 Hsp33 protein HPY08_RS00815 PF01479 S4 domain HPY08_RS00820 PF11356 Type II secretion system protein C HPY08_RS00825 PF03958 Bacterial type II/III secretion system short domain HPY08_RS00825 PF00263 Bacterial type II and III secretion system protein HPY08_RS00830 PF00437 Type II/IV secretion system protein HPY08_RS00835 PF00482 Type II secretion system (T2SS), protein F HPY08_RS00840 PF08334 Type II secretion system (T2SS), protein G HPY08_RS00840 PF07963 Prokaryotic N-terminal methylation motif HPY08_RS00845 PF12019 Type II transport protein GspH HPY08_RS00850 PF07963 Prokaryotic N-terminal methylation motif HPY08_RS00850 PF02501 Type II secretion system (T2SS), protein I HPY08_RS00855 PF11612 Type II secretion system (T2SS), protein J HPY08_RS00855 PF07963 Prokaryotic N-terminal methylation motif HPY08_RS00860 PF03934 Type II secretion system (T2SS), protein K HPY08_RS00865 PF12693 GspL periplasmic domain HPY08_RS00865 PF05134 Type II secretion system (T2SS), protein L HPY08_RS00870 PF04612 Type II secretion system (T2SS), protein M HPY08_RS00875 PF01203 Type II secretion system (T2SS), protein N HPY08_RS00880 PF00459 Inositol monophosphatase family HPY08_RS00885 PF00293 NUDIX domain HPY08_RS00890 PF01521 Iron-sulphur cluster biosynthesis HPY08_RS00890 PF01106 NifU-like domain HPY08_RS00895 PF00156 Phosphoribosyl transferase domain HPY08_RS00905 PF00561 alpha/beta hydrolase fold HPY08_RS00915 PF17674 HHH domain HPY08_RS00915 PF16921 Tex protein YqgF-like domain HPY08_RS00915 PF09371 Tex-like protein N-terminal domain HPY08_RS00915 PF00575 S1 RNA binding domain HPY08_RS00920 PF03449 Transcription elongation factor, N-terminal HPY08_RS00920 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY08_RS00925 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS00925 PF17152 Periplasmic sensor domain HPY08_RS00930 PF00072 Response regulator receiver domain HPY08_RS00930 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS00935 PF00672 HAMP domain HPY08_RS00935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS00935 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS00940 PF00860 Permease family HPY08_RS00945 PF00271 Helicase conserved C-terminal domain HPY08_RS00945 PF17191 RecG wedge domain HPY08_RS00945 PF00270 DEAD/DEAH box helicase HPY08_RS00950 PF04607 Region found in RelA / SpoT proteins HPY08_RS00950 PF13291 ACT domain HPY08_RS00950 PF02824 TGS domain HPY08_RS00955 PF01192 RNA polymerase Rpb6 HPY08_RS00960 PF00625 Guanylate kinase HPY08_RS00965 PF02592 Putative vitamin uptake transporter HPY08_RS00970 PF00474 Sodium:solute symporter family HPY08_RS00980 PF00999 Sodium/hydrogen exchanger family HPY08_RS00980 PF03471 Transporter associated domain HPY08_RS00980 PF02080 TrkA-C domain HPY08_RS00985 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS00985 PF00072 Response regulator receiver domain HPY08_RS00990 PF11412 Disulphide bond corrector protein DsbC HPY08_RS00990 PF02683 Cytochrome C biogenesis protein transmembrane region HPY08_RS00995 PF03714 Bacterial pullanase-associated domain HPY08_RS00995 PF17967 Pullulanase N2 domain HPY08_RS00995 PF18494 Pullulanase Ins domain HPY08_RS00995 PF11852 Domain of unknown function (DUF3372) HPY08_RS00995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY08_RS01000 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY08_RS01005 PF10415 Fumarase C C-terminus HPY08_RS01005 PF00206 Lyase HPY08_RS01010 PF17158 Membrane-associated sensor, integral membrane domain HPY08_RS01010 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS01015 PF04186 FxsA cytoplasmic membrane protein HPY08_RS01020 PF00588 SpoU rRNA Methylase family HPY08_RS01025 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY08_RS01025 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY08_RS01030 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS01030 PF00672 HAMP domain HPY08_RS01030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS01030 PF16527 Two-component sensor protein CpxA, periplasmic domain HPY08_RS01035 PF00072 Response regulator receiver domain HPY08_RS01035 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS01045 PF01545 Cation efflux family HPY08_RS01045 PF16916 Dimerisation domain of Zinc Transporter HPY08_RS01050 PF00365 Phosphofructokinase HPY08_RS01055 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded HPY08_RS01060 PF06005 Cell division protein ZapB HPY08_RS01065 PF02219 Methylenetetrahydrofolate reductase HPY08_RS01070 PF00696 Amino acid kinase family HPY08_RS01070 PF03447 Homoserine dehydrogenase, NAD binding domain HPY08_RS01070 PF00742 Homoserine dehydrogenase HPY08_RS01075 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY08_RS01080 PF01340 Met Apo-repressor, MetJ HPY08_RS01085 PF03949 Malic enzyme, NAD binding domain HPY08_RS01085 PF00390 Malic enzyme, N-terminal domain HPY08_RS01090 PF01197 Ribosomal protein L31 HPY08_RS01095 PF18074 Primosomal protein N C-terminal domain HPY08_RS01095 PF17764 3′ DNA-binding domain (3′BD) HPY08_RS01095 PF00271 Helicase conserved C-terminal domain HPY08_RS01095 PF18319 PriA DNA helicase Cys-rich region (CRR) domain HPY08_RS01095 PF00270 DEAD/DEAH box helicase HPY08_RS01100 PF00356 Bacterial regulatory proteins, lacI family HPY08_RS01105 PF05036 Sporulation related domain HPY08_RS01110 PF00227 Proteasome subunit HPY08_RS01115 PF10431 C-terminal, D2-small domain, of ClpB protein HPY08_RS01115 PF00004 ATPase family associated with various cellular activities (AAA) HPY08_RS01115 PF07724 AAA domain (Cdc48 subfamily) HPY08_RS01120 PF01040 UbiA prenyltransferase family HPY08_RS01125 PF03737 Aldolase/RraA HPY08_RS01130 PF01554 MatE HPY08_RS01135 PF00121 Triosephosphate isomerase HPY08_RS01155 PF08220 DeoR-like helix-turn-helix domain HPY08_RS01155 PF00455 DeoR C terminal sensor domain HPY08_RS01160 PF00166 Chaperonin 10 Kd subunit HPY08_RS01165 PF00118 TCP-1/cpn60 chaperonin family HPY08_RS01175 PF04055 Radical SAM superfamily HPY08_RS01180 PF01132 Elongation factor P (EF-P) OB domain HPY08_RS01180 PF08207 Elongation factor P (EF-P) KOW-like domain HPY08_RS01180 PF09285 Elongation factor P, C-terminal HPY08_RS01185 PF02313 Fumarate reductase subunit D HPY08_RS01190 PF02300 Fumarate reductase subunit C HPY08_RS01195 PF13183 4Fe-4S dicluster domain HPY08_RS01195 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY08_RS01200 PF00890 FAD binding domain HPY08_RS01200 PF02910 Fumarate reductase flavoprotein C-term HPY08_RS01205 PF00152 tRNA synthetases class II (D, K and N) HPY08_RS01210 PF00581 Rhodanese-like domain HPY08_RS01215 PF02556 Preprotein translocase subunit SecB HPY08_RS01220 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus HPY08_RS01220 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HPY08_RS01225 PF06426 Serine acetyltransferase, N-terminal HPY08_RS01225 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS01235 PF00311 Phosphoenolpyruvate carboxylase HPY08_RS01240 PF07687 Peptidase dimerisation domain HPY08_RS01240 PF01546 Peptidase family M20/M25/M40 HPY08_RS01245 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY08_RS01245 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY08_RS01250 PF00696 Amino acid kinase family HPY08_RS01255 PF00764 Arginosuccinate synthase HPY08_RS01260 PF00206 Lyase HPY08_RS01260 PF14698 Argininosuccinate lyase C-terminal HPY08_RS01270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY08_RS01270 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS01275 PF08534 Redoxin HPY08_RS01275 PF00462 Glutaredoxin HPY08_RS01280 PF03466 LysR substrate binding domain HPY08_RS01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS01285 PF01797 Transposase IS200 like HPY08_RS01290 PF01797 Transposase IS200 like HPY08_RS01295 PF17092 Penicillin-binding protein OB-like domain HPY08_RS01295 PF00912 Transglycosylase HPY08_RS01295 PF00905 Penicillin binding protein transpeptidase domain HPY08_RS01320 PF07660 Secretin and TonB N terminus short domain HPY08_RS01320 PF03958 Bacterial type II/III secretion system short domain HPY08_RS01320 PF11741 AMIN domain HPY08_RS01320 PF00263 Bacterial type II and III secretion system protein HPY08_RS01325 PF01202 Shikimate kinase HPY08_RS01330 PF01761 3-dehydroquinate synthase HPY08_RS01340 PF02086 D12 class N6 adenine-specific DNA methyltransferase HPY08_RS01345 PF00834 Ribulose-phosphate 3 epimerase family HPY08_RS01350 PF13419 Haloacid dehalogenase-like hydrolase HPY08_RS01355 PF00579 tRNA synthetases class I (W and Y) HPY08_RS01370 PF04055 Radical SAM superfamily HPY08_RS01370 PF00919 Uncharacterized protein family UPF0004 HPY08_RS01370 PF18693 TRAM domain HPY08_RS01375 PF00117 Glutamine amidotransferase class-I HPY08_RS01380 PF00202 Aminotransferase class-III HPY08_RS01385 PF04958 Arginine N-succinyltransferase beta subunit HPY08_RS01390 PF00171 Aldehyde dehydrogenase family HPY08_RS01400 PF00027 Cyclic nucleotide-binding domain HPY08_RS01400 PF13545 Crp-like helix-turn-helix domain HPY08_RS01405 PF00485 Phosphoribulokinase / Uridine kinase family HPY08_RS01410 PF06794 Uncharacterised protein family (UPF0270) HPY08_RS01415 PF00561 alpha/beta hydrolase fold HPY08_RS01425 PF12848 ABC transporter HPY08_RS01425 PF00005 ABC transporter HPY08_RS01430 PF02525 Flavodoxin-like fold HPY08_RS01435 PF00999 Sodium/hydrogen exchanger family HPY08_RS01435 PF02254 TrkA-N domain HPY08_RS01445 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY08_RS01450 PF01112 Asparaginase HPY08_RS01455 PF00709 Adenylosuccinate synthetase HPY08_RS01460 PF08238 Sel1 repeat HPY08_RS01465 PF11893 Domain of unknown function (DUF3413) HPY08_RS01465 PF00884 Sulfatase HPY08_RS01470 PF08461 Ribonuclease R winged-helix domain HPY08_RS01470 PF00575 S1 RNA binding domain HPY08_RS01470 PF00773 RNB domain HPY08_RS01470 PF17876 Cold shock domain HPY08_RS01470 PF08206 Ribonuclease B OB domain HPY08_RS01475 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY08_RS01475 PF00588 SpoU rRNA Methylase family HPY08_RS01480 PF00338 Ribosomal protein S10p/S20e HPY08_RS01485 PF00297 Ribosomal protein L3 HPY08_RS01490 PF00573 Ribosomal protein L4/L1 family HPY08_RS01495 PF00276 Ribosomal protein L23 HPY08_RS01500 PF00181 Ribosomal Proteins L2, RNA binding domain HPY08_RS01500 PF03947 Ribosomal Proteins L2, C-terminal domain HPY08_RS01505 PF00203 Ribosomal protein S19 HPY08_RS01510 PF00237 Ribosomal protein L22p/L17e HPY08_RS01515 PF07650 KH domain HPY08_RS01515 PF00189 Ribosomal protein S3, C-terminal domain HPY08_RS01520 PF00252 Ribosomal protein L16p/L10e HPY08_RS01525 PF00831 Ribosomal L29 protein HPY08_RS01530 PF00366 Ribosomal protein S17 HPY08_RS01535 PF00238 Ribosomal protein L14p/L23e HPY08_RS01540 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 HPY08_RS01540 PF00467 KOW motif HPY08_RS01545 PF00673 ribosomal L5P family C-terminus HPY08_RS01545 PF00281 Ribosomal protein L5 HPY08_RS01550 PF00253 Ribosomal protein S14p/S29e HPY08_RS01555 PF00410 Ribosomal protein S8 HPY08_RS01560 PF00347 Ribosomal protein L6 HPY08_RS01565 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast HPY08_RS01570 PF00333 Ribosomal protein S5, N-terminal domain HPY08_RS01570 PF03719 Ribosomal protein S5, C-terminal domain HPY08_RS01575 PF00327 Ribosomal protein L30p/L7e HPY08_RS01580 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A HPY08_RS01585 PF00344 SecY translocase HPY08_RS01590 PF00444 Ribosomal protein L36 HPY08_RS01595 PF00416 Ribosomal protein S13/S18 HPY08_RS01600 PF00411 Ribosomal protein S11 HPY08_RS01605 PF01479 S4 domain HPY08_RS01605 PF00163 Ribosomal protein S4/S9 N-terminal domain HPY08_RS01610 PF01000 RNA polymerase Rpb3/RpoA insert domain HPY08_RS01610 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain HPY08_RS01610 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain HPY08_RS01615 PF01196 Ribosomal protein L17 HPY08_RS01625 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY08_RS01625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY08_RS01630 PF04225 Opacity-associated protein A LysM-like domain HPY08_RS01630 PF08525 Opacity-associated protein A N-terminal motif HPY08_RS01635 PF00892 EamA-like transporter family HPY08_RS01640 PF13673 Acetyltransferase (GNAT) domain HPY08_RS01645 PF00270 DEAD/DEAH box helicase HPY08_RS01645 PF03880 DbpA RNA binding domain HPY08_RS01645 PF00271 Helicase conserved C-terminal domain HPY08_RS01655 PF00149 Calcineurin-like phosphoesterase HPY08_RS01655 PF02872 5'-nucleotidase, C-terminal domain HPY08_RS01660 PF14824 Sirohaem biosynthesis protein central HPY08_RS01660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY08_RS01660 PF10414 Sirohaem synthase dimerisation region HPY08_RS01665 PF01507 Phosphoadenosine phosphosulfate reductase family HPY08_RS01670 PF00009 Elongation factor Tu GTP binding domain HPY08_RS01695 PF00005 ABC transporter HPY08_RS01705 PF10795 Protein of unknown function (DUF2607) HPY08_RS01710 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) HPY08_RS01715 PF01625 Peptide methionine sulfoxide reductase HPY08_RS01720 PF17243 POTRA domain TamA domain 1 HPY08_RS01720 PF01103 Surface antigen HPY08_RS01720 PF07244 Surface antigen variable number repeat HPY08_RS01725 PF04357 TamB, inner membrane protein subunit of TAM complex HPY08_RS01730 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like HPY08_RS01735 PF00719 Inorganic pyrophosphatase HPY08_RS01740 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain HPY08_RS01745 PF02875 Mur ligase family, glutamate ligase domain HPY08_RS01745 PF08245 Mur ligase middle domain HPY08_RS01745 PF01225 Mur ligase family, catalytic domain HPY08_RS01750 PF02441 Flavoprotein HPY08_RS01760 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS01765 PF00005 ABC transporter HPY08_RS01770 PF04751 Protein of unknown function (DUF615) HPY08_RS01775 PF01523 Putative modulator of DNA gyrase HPY08_RS01780 PF03448 MgtE intracellular N domain HPY08_RS01780 PF01769 Divalent cation transporter HPY08_RS01780 PF00571 CBS domain HPY08_RS01785 PF00381 PTS HPr component phosphorylation site HPY08_RS01790 PF03668 P-loop ATPase protein family HPY08_RS01795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY08_RS01800 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY08_RS01805 PF04963 Sigma-54 factor, core binding domain HPY08_RS01805 PF00309 Sigma-54 factor, Activator interacting domain (AID) HPY08_RS01805 PF04552 Sigma-54, DNA binding domain HPY08_RS01810 PF00005 ABC transporter HPY08_RS01810 PF12399 Branched-chain amino acid ATP-binding cassette transporter HPY08_RS01815 PF03968 OstA-like protein HPY08_RS01830 PF01380 SIS domain HPY08_RS01830 PF00571 CBS domain HPY08_RS01835 PF01699 Sodium/calcium exchanger protein HPY08_RS01840 PF00005 ABC transporter HPY08_RS01845 PF02405 Permease MlaE HPY08_RS01850 PF02470 MlaD protein HPY08_RS01855 PF05494 MlaC protein HPY08_RS01865 PF01722 BolA-like protein HPY08_RS01870 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY08_RS01875 PF01553 Acyltransferase HPY08_RS01880 PF01042 Endoribonuclease L-PSP HPY08_RS01885 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain HPY08_RS01885 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain HPY08_RS01890 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY08_RS01890 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY08_RS01895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain HPY08_RS01895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain HPY08_RS01900 PF13638 PIN domain HPY08_RS01900 PF02562 PhoH-like protein HPY08_RS01905 PF00271 Helicase conserved C-terminal domain HPY08_RS01905 PF12137 RNA polymerase recycling family C-terminal HPY08_RS01905 PF00176 SNF2 family N-terminal domain HPY08_RS01905 PF18339 RapA N-terminal Tudor like domain 1 HPY08_RS01905 PF18337 RapA N-terminal Tudor like domain HPY08_RS01910 PF00849 RNA pseudouridylate synthase HPY08_RS01915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY08_RS01915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY08_RS01920 PF05987 Bacterial protein of unknown function (DUF898) HPY08_RS01930 PF00133 tRNA synthetases class I (I, L, M and V) HPY08_RS01930 PF10458 Valyl tRNA synthetase tRNA binding arm HPY08_RS01930 PF08264 Anticodon-binding domain of tRNA HPY08_RS01935 PF04364 DNA polymerase III chi subunit, HolC HPY08_RS01940 PF02789 Cytosol aminopeptidase family, N-terminal domain HPY08_RS01940 PF00883 Cytosol aminopeptidase family, catalytic domain HPY08_RS01945 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY08_RS01950 PF03739 Lipopolysaccharide export system permease LptF/LptG HPY08_RS01965 PF00072 Response regulator receiver domain HPY08_RS02005 PF00694 Aconitase C-terminal domain HPY08_RS02010 PF00330 Aconitase family (aconitate hydratase) HPY08_RS02015 PF00180 Isocitrate/isopropylmalate dehydrogenase HPY08_RS02020 PF08502 LeuA allosteric (dimerisation) domain HPY08_RS02020 PF00682 HMGL-like HPY08_RS02025 PF01569 PAP2 superfamily HPY08_RS02035 PF03466 LysR substrate binding domain HPY08_RS02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS02040 PF00501 AMP-binding enzyme HPY08_RS02045 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY08_RS02045 PF00205 Thiamine pyrophosphate enzyme, central domain HPY08_RS02045 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY08_RS02050 PF10369 Small subunit of acetolactate synthase HPY08_RS02055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY08_RS02055 PF01842 ACT domain HPY08_RS02055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY08_RS02060 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) HPY08_RS02065 PF01812 5-formyltetrahydrofolate cyclo-ligase family HPY08_RS02075 PF05164 Cell division protein ZapA HPY08_RS02080 PF03695 Uncharacterised protein family (UPF0149) HPY08_RS02085 PF01494 FAD binding domain HPY08_RS02090 PF01494 FAD binding domain HPY08_RS02105 PF03937 Flavinator of succinate dehydrogenase HPY08_RS02115 PF02910 Fumarate reductase flavoprotein C-term HPY08_RS02115 PF00890 FAD binding domain HPY08_RS02120 PF04542 Sigma-70 region 2 HPY08_RS02120 PF08281 Sigma-70, region 4 HPY08_RS02125 PF03873 Anti sigma-E protein RseA, C-terminal domain HPY08_RS02125 PF03872 Anti sigma-E protein RseA, N-terminal domain HPY08_RS02130 PF03888 MucB/RseB N-terminal domain HPY08_RS02130 PF17188 MucB/RseB C-terminal domain HPY08_RS02140 PF00679 Elongation factor G C-terminus HPY08_RS02140 PF00009 Elongation factor Tu GTP binding domain HPY08_RS02140 PF06421 GTP-binding protein LepA C-terminus HPY08_RS02140 PF03144 Elongation factor Tu domain 2 HPY08_RS02145 PF10502 Signal peptidase, peptidase S26 HPY08_RS02150 PF14622 Ribonuclease-III-like HPY08_RS02150 PF00035 Double-stranded RNA binding motif HPY08_RS02155 PF07650 KH domain HPY08_RS02155 PF01926 50S ribosome-binding GTPase HPY08_RS02160 PF02565 Recombination protein O C terminal HPY08_RS02160 PF11967 Recombination protein O N terminal HPY08_RS02165 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ HPY08_RS02170 PF01648 4'-phosphopantetheinyl transferase superfamily HPY08_RS02185 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS02190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY08_RS02190 PF00672 HAMP domain HPY08_RS02190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS02190 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS02190 PF00072 Response regulator receiver domain HPY08_RS02190 PF01627 Hpt domain HPY08_RS02195 PF05958 tRNA (Uracil-5-)-methyltransferase HPY08_RS02195 PF01938 TRAM domain HPY08_RS02200 PF13291 ACT domain HPY08_RS02200 PF04607 Region found in RelA / SpoT proteins HPY08_RS02200 PF02824 TGS domain HPY08_RS02205 PF03819 MazG nucleotide pyrophosphohydrolase domain HPY08_RS02210 PF06418 CTP synthase N-terminus HPY08_RS02210 PF00117 Glutamine amidotransferase class-I HPY08_RS02215 PF00113 Enolase, C-terminal TIM barrel domain HPY08_RS02215 PF03952 Enolase, N-terminal domain HPY08_RS02220 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY08_RS02220 PF01743 Poly A polymerase head domain HPY08_RS02220 PF01966 HD domain HPY08_RS02225 PF13401 AAA domain HPY08_RS02225 PF01471 Putative peptidoglycan binding domain HPY08_RS02235 PF08239 Bacterial SH3 domain HPY08_RS02240 PF01384 Phosphate transporter family HPY08_RS02245 PF01865 Protein of unknown function DUF47 HPY08_RS02250 PF01928 CYTH domain HPY08_RS02255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS02255 PF02743 Cache domain HPY08_RS02255 PF00672 HAMP domain HPY08_RS02260 PF08335 GlnD PII-uridylyltransferase HPY08_RS02260 PF03710 Glutamate-ammonia ligase adenylyltransferase HPY08_RS02265 PF00294 pfkB family carbohydrate kinase HPY08_RS02265 PF01467 Cytidylyltransferase-like HPY08_RS02270 PF02321 Outer membrane efflux protein HPY08_RS02275 PF00293 NUDIX domain HPY08_RS02280 PF06853 Protein of unknown function (DUF1249) HPY08_RS02285 PF00149 Calcineurin-like phosphoesterase HPY08_RS02290 PF05728 Uncharacterised protein family (UPF0227) HPY08_RS02295 PF01751 Toprim domain HPY08_RS02295 PF00986 DNA gyrase B subunit, carboxyl terminus HPY08_RS02295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS02295 PF00204 DNA gyrase B HPY08_RS02300 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY08_RS02300 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY08_RS02305 PF03884 DNA gyrase inhibitor YacG HPY08_RS02310 PF07072 Cell division protein HPY08_RS02315 PF01121 Dephospho-CoA kinase HPY08_RS02320 PF06750 Bacterial Peptidase A24 N-terminal domain HPY08_RS02320 PF01478 Type IV leader peptidase family HPY08_RS02325 PF00482 Type II secretion system (T2SS), protein F HPY08_RS02330 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain HPY08_RS02330 PF00437 Type II/IV secretion system protein HPY08_RS02335 PF07963 Prokaryotic N-terminal methylation motif HPY08_RS02340 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain HPY08_RS02340 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain HPY08_RS02345 PF01510 N-acetylmuramoyl-L-alanine amidase HPY08_RS02350 PF00258 Flavodoxin HPY08_RS02355 PF02899 Phage integrase, N-terminal SAM-like domain HPY08_RS02355 PF00589 Phage integrase family HPY08_RS02360 PF10411 Disulfide bond isomerase protein N-terminus HPY08_RS02360 PF13098 Thioredoxin-like domain HPY08_RS02365 PF01368 DHH family HPY08_RS02365 PF02272 DHHA1 domain HPY08_RS02365 PF17768 RecJ OB domain HPY08_RS02370 PF07729 FCD domain HPY08_RS02370 PF00392 Bacterial regulatory proteins, gntR family HPY08_RS02375 PF00456 Transketolase, thiamine diphosphate binding domain HPY08_RS02375 PF17831 Pyruvate dehydrogenase E1 component middle domain HPY08_RS02380 PF02817 e3 binding domain HPY08_RS02380 PF00364 Biotin-requiring enzyme HPY08_RS02380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY08_RS02385 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS02385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY08_RS02395 PF01795 MraW methylase family HPY08_RS02400 PF04999 Cell division protein FtsL HPY08_RS02405 PF00905 Penicillin binding protein transpeptidase domain HPY08_RS02405 PF03717 Penicillin-binding Protein dimerisation domain HPY08_RS02410 PF02875 Mur ligase family, glutamate ligase domain HPY08_RS02410 PF08245 Mur ligase middle domain HPY08_RS02410 PF01225 Mur ligase family, catalytic domain HPY08_RS02415 PF08245 Mur ligase middle domain HPY08_RS02415 PF02875 Mur ligase family, glutamate ligase domain HPY08_RS02415 PF01225 Mur ligase family, catalytic domain HPY08_RS02420 PF00953 Glycosyl transferase family 4 HPY08_RS02420 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 HPY08_RS02425 PF02875 Mur ligase family, glutamate ligase domain HPY08_RS02425 PF08245 Mur ligase middle domain HPY08_RS02430 PF01098 Cell cycle protein HPY08_RS02435 PF04101 Glycosyltransferase family 28 C-terminal domain HPY08_RS02435 PF03033 Glycosyltransferase family 28 N-terminal domain HPY08_RS02440 PF01225 Mur ligase family, catalytic domain HPY08_RS02440 PF08245 Mur ligase middle domain HPY08_RS02440 PF02875 Mur ligase family, glutamate ligase domain HPY08_RS02445 PF03799 Cell division protein FtsQ HPY08_RS02445 PF08478 POTRA domain, FtsQ-type HPY08_RS02450 PF02491 SHS2 domain inserted in FTSA HPY08_RS02455 PF00091 Tubulin/FtsZ family, GTPase domain HPY08_RS02455 PF12327 FtsZ family, C-terminal domain HPY08_RS02460 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase HPY08_RS02470 PF02810 SEC-C motif HPY08_RS02470 PF01043 SecA preprotein cross-linking domain HPY08_RS02470 PF07516 SecA Wing and Scaffold domain HPY08_RS02470 PF07517 SecA DEAD-like domain HPY08_RS02475 PF00293 NUDIX domain HPY08_RS02480 PF01113 Dihydrodipicolinate reductase, N-terminus HPY08_RS02480 PF05173 Dihydrodipicolinate reductase, C-terminus HPY08_RS02485 PF00117 Glutamine amidotransferase class-I HPY08_RS02485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain HPY08_RS02490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain HPY08_RS02490 PF02142 MGS-like domain HPY08_RS02490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY08_RS02505 PF01925 Sulfite exporter TauE/SafE HPY08_RS02510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS02510 PF03466 LysR substrate binding domain HPY08_RS02515 PF03458 UPF0126 domain HPY08_RS02520 PF01497 Periplasmic binding protein HPY08_RS02530 PF01048 Phosphorylase superfamily HPY08_RS02540 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY08_RS02540 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS02545 PF00310 Glutamine amidotransferases class-II HPY08_RS02545 PF04898 Glutamate synthase central domain HPY08_RS02545 PF01645 Conserved region in glutamate synthase HPY08_RS02545 PF01493 GXGXG motif HPY08_RS02550 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HPY08_RS02550 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS02555 PF00310 Glutamine amidotransferases class-II HPY08_RS02555 PF01645 Conserved region in glutamate synthase HPY08_RS02555 PF01493 GXGXG motif HPY08_RS02555 PF04898 Glutamate synthase central domain HPY08_RS02560 PF16199 Radical_SAM C-terminal domain HPY08_RS02560 PF04055 Radical SAM superfamily HPY08_RS02565 PF00563 EAL domain HPY08_RS02565 PF01590 GAF domain HPY08_RS02565 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS02565 PF00360 Phytochrome region HPY08_RS02570 PF01627 Hpt domain HPY08_RS02570 PF00989 PAS fold HPY08_RS02570 PF18415 Histidine kinase receptor ArcB trans-membrane domain HPY08_RS02570 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS02570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS02570 PF00072 Response regulator receiver domain HPY08_RS02575 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS02575 PF00072 Response regulator receiver domain HPY08_RS02585 PF03737 Aldolase/RraA HPY08_RS02600 PF00742 Homoserine dehydrogenase HPY08_RS02600 PF13840 ACT domain HPY08_RS02600 PF03447 Homoserine dehydrogenase, NAD binding domain HPY08_RS02600 PF00696 Amino acid kinase family HPY08_RS02600 PF01842 ACT domain HPY08_RS02605 PF08544 GHMP kinases C terminal HPY08_RS02605 PF00288 GHMP kinases N terminal domain HPY08_RS02610 PF14821 Threonine synthase N terminus HPY08_RS02610 PF00291 Pyridoxal-phosphate dependent enzyme HPY08_RS02615 PF01228 Glycine radical HPY08_RS02620 PF01261 Xylose isomerase-like TIM barrel HPY08_RS02625 PF03167 Uracil DNA glycosylase superfamily HPY08_RS02640 PF01235 Sodium:alanine symporter family HPY08_RS02645 PF03883 Peroxide stress protein YaaA HPY08_RS02655 PF01026 TatD related DNase HPY08_RS02660 PF07662 Na+ dependent nucleoside transporter C-terminus HPY08_RS02660 PF07670 Nucleoside recognition HPY08_RS02660 PF01773 Na+ dependent nucleoside transporter N-terminus HPY08_RS02670 PF01791 DeoC/LacD family aldolase HPY08_RS02675 PF02885 Glycosyl transferase family, helical bundle domain HPY08_RS02675 PF00591 Glycosyl transferase family, a/b domain HPY08_RS02675 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain HPY08_RS02680 PF01676 Metalloenzyme superfamily HPY08_RS02685 PF01048 Phosphorylase superfamily HPY08_RS02695 PF18429 Domain of unknown function (DUF5609) HPY08_RS02705 PF18073 Rubredoxin metal binding domain HPY08_RS02710 PF14492 Elongation Factor G, domain II HPY08_RS02710 PF03144 Elongation factor Tu domain 2 HPY08_RS02710 PF00679 Elongation factor G C-terminus HPY08_RS02710 PF03764 Elongation factor G, domain IV HPY08_RS02710 PF00009 Elongation factor Tu GTP binding domain HPY08_RS02715 PF00501 AMP-binding enzyme HPY08_RS02720 PF00072 Response regulator receiver domain HPY08_RS02730 PF02929 Beta galactosidase small chain HPY08_RS02730 PF00703 Glycosyl hydrolases family 2 HPY08_RS02730 PF02836 Glycosyl hydrolases family 2, TIM barrel domain HPY08_RS02730 PF16353 Domain of unknown function(DUF4981) HPY08_RS02730 PF02837 Glycosyl hydrolases family 2, sugar binding domain HPY08_RS02735 PF00356 Bacterial regulatory proteins, lacI family HPY08_RS02740 PF01588 Putative tRNA binding domain HPY08_RS02750 PF01544 CorA-like Mg2+ transporter protein HPY08_RS02755 PF02080 TrkA-C domain HPY08_RS02755 PF08443 RimK-like ATP-grasp domain HPY08_RS02755 PF18030 RimK PreATP-grasp domain HPY08_RS02760 PF00583 Acetyltransferase (GNAT) family HPY08_RS02770 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle HPY08_RS02770 PF14602 Hexapeptide repeat of succinyl-transferase HPY08_RS02775 PF07130 YebG protein HPY08_RS02790 PF17946 RecC C-terminal domain HPY08_RS02795 PF12705 PD-(D/E)XK nuclease superfamily HPY08_RS02795 PF00580 UvrD/REP helicase N-terminal domain HPY08_RS02795 PF13361 UvrD-like helicase C-terminal domain HPY08_RS02800 PF13538 UvrD-like helicase C-terminal domain HPY08_RS02810 PF00696 Amino acid kinase family HPY08_RS02810 PF00583 Acetyltransferase (GNAT) family HPY08_RS02820 PF06725 3D domain HPY08_RS02820 PF03562 MltA specific insert domain HPY08_RS02825 PF00899 ThiF family HPY08_RS02830 PF02657 Fe-S metabolism associated domain HPY08_RS02835 PF00266 Aminotransferase class-V HPY08_RS02840 PF01965 DJ-1/PfpI family HPY08_RS02845 PF02558 Ketopantoate reductase PanE/ApbA HPY08_RS02845 PF08546 Ketopantoate reductase PanE/ApbA C terminal HPY08_RS02850 PF03502 Nucleoside-specific channel-forming protein, Tsx HPY08_RS02860 PF04542 Sigma-70 region 2 HPY08_RS02860 PF04545 Sigma-70, region 4 HPY08_RS02870 PF07690 Major Facilitator Superfamily HPY08_RS02875 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY08_RS02885 PF05175 Methyltransferase small domain HPY08_RS02890 PF01722 BolA-like protein HPY08_RS02895 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) HPY08_RS02895 PF11973 NQRA C-terminal domain HPY08_RS02900 PF03116 NQR2, RnfD, RnfE family HPY08_RS02905 PF04205 FMN-binding domain HPY08_RS02910 PF02508 Rnf-Nqr subunit, membrane protein HPY08_RS02915 PF02508 Rnf-Nqr subunit, membrane protein HPY08_RS02920 PF00175 Oxidoreductase NAD-binding domain HPY08_RS02920 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY08_RS02920 PF00970 Oxidoreductase FAD-binding domain HPY08_RS02925 PF02424 ApbE family HPY08_RS02935 PF11798 IMS family HHH motif HPY08_RS02935 PF00817 impB/mucB/samB family HPY08_RS02945 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS02945 PF17158 Membrane-associated sensor, integral membrane domain HPY08_RS02950 PF00209 Sodium:neurotransmitter symporter family HPY08_RS02960 PF18030 RimK PreATP-grasp domain HPY08_RS02960 PF08443 RimK-like ATP-grasp domain HPY08_RS02965 PF18030 RimK PreATP-grasp domain HPY08_RS02965 PF08443 RimK-like ATP-grasp domain HPY08_RS02970 PF07687 Peptidase dimerisation domain HPY08_RS02970 PF01546 Peptidase family M20/M25/M40 HPY08_RS02975 PF00860 Permease family HPY08_RS02980 PF00156 Phosphoribosyl transferase domain HPY08_RS02990 PF07417 Sigma factor-binding transcriptional regulator Crl HPY08_RS02995 PF00696 Amino acid kinase family HPY08_RS02995 PF01472 PUA domain HPY08_RS03000 PF00171 Aldehyde dehydrogenase family HPY08_RS03005 PF03477 ATP cone domain HPY08_RS03010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY08_RS03010 PF01872 RibD C-terminal domain HPY08_RS03015 PF00677 Lumazine binding domain HPY08_RS03020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY08_RS03020 PF00925 GTP cyclohydrolase II HPY08_RS03025 PF00885 6,7-dimethyl-8-ribityllumazine synthase HPY08_RS03030 PF01029 NusB family HPY08_RS03035 PF00586 AIR synthase related protein, N-terminal domain HPY08_RS03035 PF02769 AIR synthase related protein, C-terminal domain HPY08_RS03040 PF04608 Phosphatidylglycerophosphatase A HPY08_RS03045 PF11944 Protein of unknown function (DUF3461) HPY08_RS03050 PF08335 GlnD PII-uridylyltransferase HPY08_RS03050 PF01966 HD domain HPY08_RS03050 PF01909 Nucleotidyltransferase domain HPY08_RS03055 PF00557 Metallopeptidase family M24 HPY08_RS03060 PF00318 Ribosomal protein S2 HPY08_RS03065 PF00889 Elongation factor TS HPY08_RS03070 PF00696 Amino acid kinase family HPY08_RS03075 PF01765 Ribosome recycling factor HPY08_RS03080 PF01255 Putative undecaprenyl diphosphate synthase HPY08_RS03090 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase HPY08_RS03090 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain HPY08_RS03090 PF13288 DXP reductoisomerase C-terminal domain HPY08_RS03095 PF02163 Peptidase family M50 HPY08_RS03095 PF17820 PDZ domain HPY08_RS03100 PF01103 Surface antigen HPY08_RS03100 PF07244 Surface antigen variable number repeat HPY08_RS03105 PF03938 Outer membrane protein (OmpH-like) HPY08_RS03110 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD HPY08_RS03110 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS03115 PF07977 FabA-like domain HPY08_RS03120 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 HPY08_RS03120 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS03125 PF02684 Lipid-A-disaccharide synthetase HPY08_RS03130 PF01351 Ribonuclease HII HPY08_RS03135 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPY08_RS03135 PF01336 OB-fold nucleic acid binding domain HPY08_RS03135 PF02811 PHP domain HPY08_RS03135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPY08_RS03135 PF14579 Helix-hairpin-helix motif HPY08_RS03140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit HPY08_RS03145 PF11734 TilS substrate C-terminal domain HPY08_RS03145 PF09179 TilS substrate binding domain HPY08_RS03145 PF01171 PP-loop family HPY08_RS03150 PF00034 Cytochrome c HPY08_RS03155 PF05870 Phenolic acid decarboxylase (PAD) HPY08_RS03160 PF00543 Nitrogen regulatory protein P-II HPY08_RS03165 PF03372 Endonuclease/Exonuclease/phosphatase family HPY08_RS03170 PF01464 Transglycosylase SLT domain HPY08_RS03170 PF01476 LysM domain HPY08_RS03175 PF00753 Metallo-beta-lactamase superfamily HPY08_RS03175 PF16123 Hydroxyacylglutathione hydrolase C-terminus HPY08_RS03180 PF08241 Methyltransferase domain HPY08_RS03185 PF00075 RNase H HPY08_RS03190 PF00929 Exonuclease HPY08_RS03200 PF09317 Domain of unknown function (DUF1974) HPY08_RS03200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY08_RS03200 PF02770 Acyl-CoA dehydrogenase, middle domain HPY08_RS03200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY08_RS03205 PF13580 SIS domain HPY08_RS03210 PF13230 Glutamine amidotransferases class-II HPY08_RS03215 PF00551 Formyl transferase HPY08_RS03220 PF02769 AIR synthase related protein, C-terminal domain HPY08_RS03220 PF00586 AIR synthase related protein, N-terminal domain HPY08_RS03230 PF08448 PAS fold HPY08_RS03230 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS03235 PF01479 S4 domain HPY08_RS03235 PF00849 RNA pseudouridylate synthase HPY08_RS03240 PF01713 Smr domain HPY08_RS03260 PF02838 Glycosyl hydrolase family 20, domain 2 HPY08_RS03260 PF03173 Putative carbohydrate binding domain HPY08_RS03260 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain HPY08_RS03260 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY08_RS03270 PF00403 Heavy-metal-associated domain HPY08_RS03275 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY08_RS03280 PF00691 OmpA family HPY08_RS03280 PF01389 OmpA-like transmembrane domain HPY08_RS03290 PF07715 TonB-dependent Receptor Plug Domain HPY08_RS03295 PF08021 Siderophore-interacting FAD-binding domain HPY08_RS03295 PF04954 Siderophore-interacting protein HPY08_RS03300 PF00550 Phosphopantetheine attachment site HPY08_RS03300 PF08242 Methyltransferase domain HPY08_RS03300 PF00668 Condensation domain HPY08_RS03300 PF00501 AMP-binding enzyme HPY08_RS03335 PF00072 Response regulator receiver domain HPY08_RS03335 PF01584 CheW-like domain HPY08_RS03340 PF01739 CheR methyltransferase, SAM binding domain HPY08_RS03340 PF03705 CheR methyltransferase, all-alpha domain HPY08_RS03345 PF00460 Flagella basal body rod protein HPY08_RS03350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY08_RS03350 PF00460 Flagella basal body rod protein HPY08_RS03355 PF13860 FlgD Ig-like domain HPY08_RS03355 PF13861 FlgD Tudor-like domain HPY08_RS03355 PF03963 Flagellar hook capping protein - N-terminal region HPY08_RS03360 PF07559 Flagellar basal body protein FlaE HPY08_RS03360 PF00460 Flagella basal body rod protein HPY08_RS03360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY08_RS03365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY08_RS03365 PF00460 Flagella basal body rod protein HPY08_RS03370 PF00460 Flagella basal body rod protein HPY08_RS03370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY08_RS03375 PF02107 Flagellar L-ring protein HPY08_RS03380 PF02119 Flagellar P-ring protein HPY08_RS03385 PF10135 Rod binding protein HPY08_RS03385 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HPY08_RS03390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal HPY08_RS03390 PF07196 Flagellin hook IN motif HPY08_RS03400 PF00669 Bacterial flagellin N-terminal helical region HPY08_RS03400 PF07196 Flagellin hook IN motif HPY08_RS03400 PF00700 Bacterial flagellin C-terminal helical region HPY08_RS03405 PF00700 Bacterial flagellin C-terminal helical region HPY08_RS03405 PF00669 Bacterial flagellin N-terminal helical region HPY08_RS03405 PF07196 Flagellin hook IN motif HPY08_RS03490 PF01926 50S ribosome-binding GTPase HPY08_RS03490 PF06071 Protein of unknown function (DUF933) HPY08_RS03495 PF01195 Peptidyl-tRNA hydrolase HPY08_RS03500 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase HPY08_RS03500 PF14572 Phosphoribosyl synthetase-associated domain HPY08_RS03505 PF08544 GHMP kinases C terminal HPY08_RS03505 PF00288 GHMP kinases N terminal domain HPY08_RS03510 PF03550 Outer membrane lipoprotein LolB HPY08_RS03515 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain HPY08_RS03515 PF01488 Shikimate / quinate 5-dehydrogenase HPY08_RS03515 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain HPY08_RS03520 PF00472 RF-1 domain HPY08_RS03520 PF03462 PCRF domain HPY08_RS03525 PF17827 PrmC N-terminal domain HPY08_RS03525 PF13847 Methyltransferase domain HPY08_RS03530 PF04247 Invasion gene expression up-regulator, SirB HPY08_RS03535 PF13369 Transglutaminase-like superfamily HPY08_RS03540 PF00793 DAHP synthetase I family HPY08_RS03545 PF00149 Calcineurin-like phosphoesterase HPY08_RS03545 PF02872 5'-nucleotidase, C-terminal domain HPY08_RS03550 PF04073 Aminoacyl-tRNA editing domain HPY08_RS03555 PF00860 Permease family HPY08_RS03565 PF01797 Transposase IS200 like HPY08_RS03575 PF03358 NADPH-dependent FMN reductase HPY08_RS03580 PF03960 ArsC family HPY08_RS03585 PF01435 Peptidase family M48 HPY08_RS03585 PF13181 Tetratricopeptide repeat HPY08_RS03595 PF01594 AI-2E family transporter HPY08_RS03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS03600 PF00672 HAMP domain HPY08_RS03600 PF02743 Cache domain HPY08_RS03605 PF00578 AhpC/TSA family HPY08_RS03615 PF00701 Dihydrodipicolinate synthetase family HPY08_RS03620 PF06804 NlpB/DapX lipoprotein HPY08_RS03630 PF02557 D-alanyl-D-alanine carboxypeptidase HPY08_RS03635 PF01546 Peptidase family M20/M25/M40 HPY08_RS03635 PF07687 Peptidase dimerisation domain HPY08_RS03640 PF03960 ArsC family HPY08_RS03655 PF11143 Protein of unknown function (DUF2919) HPY08_RS03660 PF04261 Dyp-type peroxidase family HPY08_RS03665 PF00669 Bacterial flagellin N-terminal helical region HPY08_RS03665 PF07196 Flagellin hook IN motif HPY08_RS03665 PF00700 Bacterial flagellin C-terminal helical region HPY08_RS03670 PF00700 Bacterial flagellin C-terminal helical region HPY08_RS03670 PF07196 Flagellin hook IN motif HPY08_RS03670 PF00669 Bacterial flagellin N-terminal helical region HPY08_RS03675 PF00700 Bacterial flagellin C-terminal helical region HPY08_RS03675 PF07196 Flagellin hook IN motif HPY08_RS03675 PF00669 Bacterial flagellin N-terminal helical region HPY08_RS03680 PF03646 FlaG protein HPY08_RS03685 PF02465 Flagellar hook-associated protein 2 N-terminus HPY08_RS03685 PF07195 Flagellar hook-associated protein 2 C-terminus HPY08_RS03685 PF07196 Flagellin hook IN motif HPY08_RS03695 PF02561 Flagellar protein FliS HPY08_RS03700 PF00158 Sigma-54 interaction domain HPY08_RS03700 PF06490 Flagellar regulatory protein FleQ HPY08_RS03700 PF02954 Bacterial regulatory protein, Fis family HPY08_RS03705 PF08447 PAS fold HPY08_RS03705 PF13493 Domain of unknown function (DUF4118) HPY08_RS03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS03705 PF13426 PAS domain HPY08_RS03705 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS03705 PF00989 PAS fold HPY08_RS03710 PF00158 Sigma-54 interaction domain HPY08_RS03710 PF00072 Response regulator receiver domain HPY08_RS03710 PF02954 Bacterial regulatory protein, Fis family HPY08_RS03715 PF02049 Flagellar hook-basal body complex protein FliE HPY08_RS03720 PF01514 Secretory protein of YscJ/FliF family HPY08_RS03720 PF08345 Flagellar M-ring protein C-terminal HPY08_RS03725 PF14841 FliG middle domain HPY08_RS03725 PF14842 FliG N-terminal domain HPY08_RS03725 PF01706 FliG C-terminal domain HPY08_RS03735 PF18269 T3SS EscN ATPase C-terminal domain HPY08_RS03735 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY08_RS03755 PF03748 Flagellar basal body-associated protein FliL HPY08_RS03760 PF02154 Flagellar motor switch protein FliM HPY08_RS03760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY08_RS03765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term HPY08_RS03770 PF04347 Flagellar biosynthesis protein, FliO HPY08_RS03775 PF00813 FliP family HPY08_RS03780 PF01313 Bacterial export proteins, family 3 HPY08_RS03785 PF01311 Bacterial export proteins, family 1 HPY08_RS03790 PF01312 FlhB HrpN YscU SpaS Family HPY08_RS03795 PF01713 Smr domain HPY08_RS03800 PF05175 Methyltransferase small domain HPY08_RS03805 PF01264 Chorismate synthase HPY08_RS03810 PF03458 UPF0126 domain HPY08_RS03815 PF04315 Elongation factor P hydroxylase HPY08_RS03820 PF08891 YfcL protein HPY08_RS03825 PF03358 NADPH-dependent FMN reductase HPY08_RS03830 PF05430 S-adenosyl-L-methionine-dependent methyltransferase HPY08_RS03830 PF01266 FAD dependent oxidoreductase HPY08_RS03835 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY08_RS03835 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY08_RS03840 PF11890 Domain of unknown function (DUF3410) HPY08_RS03840 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY08_RS03840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY08_RS03845 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY08_RS03845 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY08_RS03850 PF01475 Ferric uptake regulator family HPY08_RS03860 PF03466 LysR substrate binding domain HPY08_RS03860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS03865 PF03788 LrgA family HPY08_RS03870 PF04172 LrgB-like family HPY08_RS03875 PF00258 Flavodoxin HPY08_RS03885 PF12697 Alpha/beta hydrolase family HPY08_RS03890 PF17206 SeqA protein N-terminal domain HPY08_RS03890 PF03925 SeqA protein C-terminal domain HPY08_RS03895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY08_RS03895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY08_RS03895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY08_RS03895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY08_RS03905 PF01784 NIF3 (NGG1p interacting factor 3) HPY08_RS03910 PF00285 Citrate synthase, C-terminal domain HPY08_RS03915 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY08_RS03920 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit HPY08_RS03925 PF02910 Fumarate reductase flavoprotein C-term HPY08_RS03925 PF00890 FAD binding domain HPY08_RS03930 PF13085 2Fe-2S iron-sulfur cluster binding domain HPY08_RS03935 PF16870 2-oxoglutarate dehydrogenase C-terminal HPY08_RS03935 PF00676 Dehydrogenase E1 component HPY08_RS03935 PF16078 2-oxoglutarate dehydrogenase N-terminus HPY08_RS03935 PF02779 Transketolase, pyrimidine binding domain HPY08_RS03940 PF02817 e3 binding domain HPY08_RS03940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HPY08_RS03940 PF00364 Biotin-requiring enzyme HPY08_RS03945 PF00549 CoA-ligase HPY08_RS03945 PF08442 ATP-grasp domain HPY08_RS03950 PF00549 CoA-ligase HPY08_RS03950 PF02629 CoA binding domain HPY08_RS03955 PF00950 ABC 3 transport family HPY08_RS03960 PF00005 ABC transporter HPY08_RS03965 PF01297 Zinc-uptake complex component A periplasmic HPY08_RS03970 PF12833 Helix-turn-helix domain HPY08_RS03970 PF02311 AraC-like ligand binding domain HPY08_RS03975 PF04023 FeoA domain HPY08_RS03980 PF07670 Nucleoside recognition HPY08_RS03980 PF07664 Ferrous iron transport protein B C terminus HPY08_RS03980 PF02421 Ferrous iron transport protein B HPY08_RS03995 PF00750 tRNA synthetases class I (R) HPY08_RS03995 PF03485 Arginyl tRNA synthetase N terminal domain HPY08_RS03995 PF05746 DALR anticodon binding domain HPY08_RS04005 PF00675 Insulinase (Peptidase family M16) HPY08_RS04005 PF05193 Peptidase M16 inactive domain HPY08_RS04010 PF00300 Histidine phosphatase superfamily (branch 1) HPY08_RS04015 PF00771 FHIPEP family HPY08_RS04020 PF00448 SRP54-type protein, GTPase domain HPY08_RS04025 PF10609 NUBPL iron-transfer P-loop NTPase HPY08_RS04030 PF04542 Sigma-70 region 2 HPY08_RS04030 PF04539 Sigma-70 region 3 HPY08_RS04030 PF04545 Sigma-70, region 4 HPY08_RS04035 PF00072 Response regulator receiver domain HPY08_RS04040 PF04344 Chemotaxis phosphatase, CheZ HPY08_RS04045 PF00072 Response regulator receiver domain HPY08_RS04045 PF01627 Hpt domain HPY08_RS04045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS04045 PF02895 Signal transducing histidine kinase, homodimeric domain HPY08_RS04045 PF01584 CheW-like domain HPY08_RS04050 PF00072 Response regulator receiver domain HPY08_RS04050 PF01339 CheB methylesterase HPY08_RS04055 PF13614 AAA domain HPY08_RS04065 PF01584 CheW-like domain HPY08_RS04075 PF00005 ABC transporter HPY08_RS04080 PF03379 CcmB protein HPY08_RS04085 PF01578 Cytochrome C assembly protein HPY08_RS04090 PF04995 Heme exporter protein D (CcmD) HPY08_RS04095 PF03100 CcmE HPY08_RS04100 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal HPY08_RS04100 PF01578 Cytochrome C assembly protein HPY08_RS04105 PF08534 Redoxin HPY08_RS04110 PF03918 Cytochrome C biogenesis protein HPY08_RS04120 PF04333 MlaA lipoprotein HPY08_RS04135 PF02777 Iron/manganese superoxide dismutases, C-terminal domain HPY08_RS04135 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain HPY08_RS04140 PF00462 Glutaredoxin HPY08_RS04145 PF01751 Toprim domain HPY08_RS04145 PF01131 DNA topoisomerase HPY08_RS04150 PF00850 Histone deacetylase domain HPY08_RS04165 PF11893 Domain of unknown function (DUF3413) HPY08_RS04165 PF00884 Sulfatase HPY08_RS04170 PF07208 Protein of unknown function (DUF1414) HPY08_RS04175 PF04245 37-kD nucleoid-associated bacterial protein HPY08_RS04185 PF03553 Na+/H+ antiporter family HPY08_RS04190 PF01118 Semialdehyde dehydrogenase, NAD binding domain HPY08_RS04190 PF02774 Semialdehyde dehydrogenase, dimerisation domain HPY08_RS04195 PF01914 MarC family integral membrane protein HPY08_RS04200 PF00465 Iron-containing alcohol dehydrogenase HPY08_RS04200 PF00171 Aldehyde dehydrogenase family HPY08_RS04210 PF01740 STAS domain HPY08_RS04210 PF00916 Sulfate permease family HPY08_RS04215 PF12111 Polyribonucleotide phosphorylase C terminal HPY08_RS04215 PF00575 S1 RNA binding domain HPY08_RS04215 PF10150 Ribonuclease E/G family HPY08_RS04220 PF00849 RNA pseudouridylate synthase HPY08_RS04220 PF01479 S4 domain HPY08_RS04225 PF02545 Maf-like protein HPY08_RS04230 PF02620 Large ribosomal RNA subunit accumulation protein YceD HPY08_RS04235 PF01783 Ribosomal L32p protein family HPY08_RS04240 PF02504 Fatty acid synthesis protein HPY08_RS04245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY08_RS04245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY08_RS04250 PF00698 Acyl transferase domain HPY08_RS04260 PF00550 Phosphopantetheine attachment site HPY08_RS04265 PF00109 Beta-ketoacyl synthase, N-terminal domain HPY08_RS04265 PF02801 Beta-ketoacyl synthase, C-terminal domain HPY08_RS04270 PF01063 Amino-transferase class IV HPY08_RS04275 PF02618 YceG-like family HPY08_RS04280 PF02223 Thymidylate kinase HPY08_RS04285 PF09115 DNA polymerase III, delta subunit, C terminal HPY08_RS04290 PF01026 TatD related DNase HPY08_RS04295 PF00367 phosphotransferase system, EIIB HPY08_RS04295 PF02378 Phosphotransferase system, EIIC HPY08_RS04305 PF00209 Sodium:neurotransmitter symporter family HPY08_RS04320 PF01734 Patatin-like phospholipase HPY08_RS04325 PF02887 Pyruvate kinase, alpha/beta domain HPY08_RS04325 PF00224 Pyruvate kinase, barrel domain HPY08_RS04330 PF00480 ROK family HPY08_RS04335 PF00072 Response regulator receiver domain HPY08_RS04335 PF01584 CheW-like domain HPY08_RS04350 PF13847 Methyltransferase domain HPY08_RS04360 PF01263 Aldose 1-epimerase HPY08_RS04365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY08_RS04365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY08_RS04370 PF01641 SelR domain HPY08_RS04380 PF07023 Protein of unknown function (DUF1315) HPY08_RS04385 PF00710 Asparaginase, N-terminal HPY08_RS04385 PF17763 Glutaminase/Asparaginase C-terminal domain HPY08_RS04390 PF01343 Peptidase family S49 HPY08_RS04395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY08_RS04395 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS04400 PF00551 Formyl transferase HPY08_RS04400 PF01842 ACT domain HPY08_RS04410 PF04851 Type III restriction enzyme, res subunit HPY08_RS04410 PF13307 Helicase C-terminal domain HPY08_RS04415 PF00814 Glycoprotease family HPY08_RS04430 PF00561 alpha/beta hydrolase fold HPY08_RS04435 PF13193 AMP-binding enzyme C-terminal domain HPY08_RS04435 PF00501 AMP-binding enzyme HPY08_RS04440 PF01612 3'-5' exonuclease HPY08_RS04440 PF00570 HRDC domain HPY08_RS04455 PF01966 HD domain HPY08_RS04455 PF13286 Phosphohydrolase-associated domain HPY08_RS04465 PF00155 Aminotransferase class I and II HPY08_RS04470 PF00425 chorismate binding enzyme HPY08_RS04475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY08_RS04475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY08_RS04475 PF16582 Middle domain of thiamine pyrophosphate HPY08_RS04480 PF12697 Alpha/beta hydrolase family HPY08_RS04485 PF00378 Enoyl-CoA hydratase/isomerase HPY08_RS04490 PF13378 Enolase C-terminal domain-like HPY08_RS04495 PF13193 AMP-binding enzyme C-terminal domain HPY08_RS04495 PF00501 AMP-binding enzyme HPY08_RS04500 PF03594 Benzoate membrane transport protein HPY08_RS04505 PF07690 Major Facilitator Superfamily HPY08_RS04525 PF04170 NlpE N-terminal domain HPY08_RS04530 PF03776 Septum formation topological specificity factor MinE HPY08_RS04535 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY08_RS04540 PF03775 Septum formation inhibitor MinC, C-terminal domain HPY08_RS04540 PF05209 Septum formation inhibitor MinC, N-terminal domain HPY08_RS04545 PF05166 YcgL domain HPY08_RS04550 PF13406 Transglycosylase SLT domain HPY08_RS04555 PF03466 LysR substrate binding domain HPY08_RS04555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS04560 PF01773 Na+ dependent nucleoside transporter N-terminus HPY08_RS04560 PF07662 Na+ dependent nucleoside transporter C-terminus HPY08_RS04560 PF07670 Nucleoside recognition HPY08_RS04565 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY08_RS04570 PF01568 Molydopterin dinucleotide binding domain HPY08_RS04570 PF00384 Molybdopterin oxidoreductase HPY08_RS04570 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY08_RS04580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS04580 PF03466 LysR substrate binding domain HPY08_RS04585 PF01494 FAD binding domain HPY08_RS04590 PF02668 Taurine catabolism dioxygenase TauD, TfdA family HPY08_RS04600 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain HPY08_RS04600 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain HPY08_RS04645 PF00563 EAL domain HPY08_RS04645 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS04645 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS04645 PF13188 PAS domain HPY08_RS04655 PF02696 Uncharacterized ACR, YdiU/UPF0061 family HPY08_RS04660 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY08_RS04665 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component HPY08_RS04670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY08_RS04675 PF02954 Bacterial regulatory protein, Fis family HPY08_RS04675 PF00072 Response regulator receiver domain HPY08_RS04675 PF00158 Sigma-54 interaction domain HPY08_RS04680 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS04680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS04690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY08_RS04690 PF05698 Bacterial trigger factor protein (TF) C-terminus HPY08_RS04690 PF05697 Bacterial trigger factor protein (TF) HPY08_RS04695 PF00574 Clp protease HPY08_RS04700 PF10431 C-terminal, D2-small domain, of ClpB protein HPY08_RS04700 PF07724 AAA domain (Cdc48 subfamily) HPY08_RS04700 PF06689 ClpX C4-type zinc finger HPY08_RS04705 PF02190 ATP-dependent protease La (LON) substrate-binding domain HPY08_RS04705 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY08_RS04705 PF00004 ATPase family associated with various cellular activities (AAA) HPY08_RS04710 PF00216 Bacterial DNA-binding protein HPY08_RS04715 PF13145 PPIC-type PPIASE domain HPY08_RS04725 PF02224 Cytidylate kinase HPY08_RS04730 PF00575 S1 RNA binding domain HPY08_RS04735 PF01797 Transposase IS200 like HPY08_RS04740 PF00216 Bacterial DNA-binding protein HPY08_RS04745 PF06305 Lipopolysaccharide assembly protein A domain HPY08_RS04750 PF18073 Rubredoxin metal binding domain HPY08_RS04755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY08_RS04760 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) HPY08_RS04770 PF03466 LysR substrate binding domain HPY08_RS04770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS04780 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY08_RS04780 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY08_RS04785 PF01037 Lrp/AsnC ligand binding domain HPY08_RS04790 PF13491 4TM region of DNA translocase FtsK/SpoIIIE HPY08_RS04790 PF17854 FtsK alpha domain HPY08_RS04790 PF01580 FtsK/SpoIIIE family HPY08_RS04790 PF09397 Ftsk gamma domain HPY08_RS04795 PF02600 Disulfide bond formation protein DsbB HPY08_RS04800 PF06450 Bacterial Na+/H+ antiporter B (NhaB) HPY08_RS04805 PF07840 FadR C-terminal domain HPY08_RS04805 PF00392 Bacterial regulatory proteins, gntR family HPY08_RS04815 PF00672 HAMP domain HPY08_RS04815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS04820 PF01230 HIT domain HPY08_RS04835 PF08139 Prokaryotic membrane lipoprotein lipid attachment site HPY08_RS04835 PF13036 Peptidoglycan-synthase activator LpoB HPY08_RS04845 PF05728 Uncharacterised protein family (UPF0227) HPY08_RS04850 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS04865 PF07968 Leukocidin/Hemolysin toxin family HPY08_RS04865 PF12563 Hemolytic toxin N terminal HPY08_RS04865 PF16458 Beta-prism lectin HPY08_RS04875 PF02559 CarD-like/TRCF domain HPY08_RS04875 PF00270 DEAD/DEAH box helicase HPY08_RS04875 PF00271 Helicase conserved C-terminal domain HPY08_RS04875 PF03461 TRCF domain HPY08_RS04875 PF17757 UvrB interaction domain HPY08_RS04885 PF12704 MacB-like periplasmic core domain HPY08_RS04885 PF02687 FtsX-like permease family HPY08_RS04890 PF00005 ABC transporter HPY08_RS04895 PF12704 MacB-like periplasmic core domain HPY08_RS04895 PF02687 FtsX-like permease family HPY08_RS04905 PF03772 Competence protein HPY08_RS04905 PF13567 Domain of unknown function (DUF4131) HPY08_RS04905 PF00753 Metallo-beta-lactamase superfamily HPY08_RS04910 PF00664 ABC transporter transmembrane region HPY08_RS04910 PF00005 ABC transporter HPY08_RS04915 PF02606 Tetraacyldisaccharide-1-P 4'-kinase HPY08_RS04920 PF03966 Trm112p-like protein HPY08_RS04925 PF02348 Cytidylyltransferase HPY08_RS04930 PF04293 SpoVR like protein HPY08_RS04935 PF04285 Protein of unknown function (DUF444) HPY08_RS04940 PF08298 PrkA AAA domain HPY08_RS04940 PF06798 PrkA serine protein kinase C-terminal domain HPY08_RS04945 PF03887 YfbU domain HPY08_RS04955 PF04055 Radical SAM superfamily HPY08_RS04960 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS04960 PF00672 HAMP domain HPY08_RS04960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS04970 PF02901 Pyruvate formate lyase-like HPY08_RS04970 PF01228 Glycine radical HPY08_RS04980 PF00005 ABC transporter HPY08_RS04985 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY08_RS04990 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS04995 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS05000 PF03372 Endonuclease/Exonuclease/phosphatase family HPY08_RS05005 PF10689 Protein of unknown function (DUF2496) HPY08_RS05010 PF07445 Primosomal replication protein priC HPY08_RS05015 PF01925 Sulfite exporter TauE/SafE HPY08_RS05020 PF13307 Helicase C-terminal domain HPY08_RS05020 PF06733 DEAD_2 HPY08_RS05030 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY08_RS05035 PF02810 SEC-C motif HPY08_RS05040 PF00563 EAL domain HPY08_RS05040 PF08668 HDOD domain HPY08_RS05045 PF00149 Calcineurin-like phosphoesterase HPY08_RS05050 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD HPY08_RS05055 PF01406 tRNA synthetases class I (C) catalytic domain HPY08_RS05055 PF09190 DALR domain HPY08_RS05060 PF02075 Crossover junction endodeoxyribonuclease RuvC HPY08_RS05065 PF07499 RuvA, C-terminal domain HPY08_RS05065 PF01330 RuvA N terminal domain HPY08_RS05070 PF17864 RuvB AAA lid domain HPY08_RS05070 PF05491 RuvB C-terminal winged helix domain HPY08_RS05070 PF05496 Holliday junction DNA helicase RuvB P-loop domain HPY08_RS05075 PF01654 Cytochrome bd terminal oxidase subunit I HPY08_RS05080 PF02322 Cytochrome bd terminal oxidase subunit II HPY08_RS05085 PF08173 Membrane bound YbgT-like protein HPY08_RS05090 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) HPY08_RS05095 PF03061 Thioesterase superfamily HPY08_RS05100 PF01618 MotA/TolQ/ExbB proton channel family HPY08_RS05105 PF02472 Biopolymer transport protein ExbD/TolR HPY08_RS05115 PF04052 TolB amino-terminal domain HPY08_RS05115 PF07676 WD40-like Beta Propeller Repeat HPY08_RS05120 PF00691 OmpA family HPY08_RS05130 PF02445 Quinolinate synthetase A protein HPY08_RS05140 PF09308 LuxQ, periplasmic HPY08_RS05140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS05140 PF00072 Response regulator receiver domain HPY08_RS05140 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS05145 PF06610 L-alanine exporter HPY08_RS05150 PF01238 Phosphomannose isomerase type I HPY08_RS05155 PF02378 Phosphotransferase system, EIIC HPY08_RS05155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY08_RS05155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY08_RS05160 PF12833 Helix-turn-helix domain HPY08_RS05170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY08_RS05190 PF00171 Aldehyde dehydrogenase family HPY08_RS05195 PF02954 Bacterial regulatory protein, Fis family HPY08_RS05195 PF01590 GAF domain HPY08_RS05195 PF00158 Sigma-54 interaction domain HPY08_RS05200 PF09905 DNA-binding protein VF530 HPY08_RS05210 PF00875 DNA photolyase HPY08_RS05210 PF03441 FAD binding domain of DNA photolyase HPY08_RS05240 PF00873 AcrB/AcrD/AcrF family HPY08_RS05245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY08_RS05255 PF02470 MlaD protein HPY08_RS05260 PF04403 Paraquat-inducible protein A HPY08_RS05265 PF00924 Mechanosensitive ion channel HPY08_RS05265 PF05552 Conserved TM helix HPY08_RS05285 PF08362 YcdC-like protein, C-terminal region HPY08_RS05285 PF00440 Bacterial regulatory proteins, tetR family HPY08_RS05290 PF00171 Aldehyde dehydrogenase family HPY08_RS05295 PF07383 Protein of unknown function (DUF1496) HPY08_RS05305 PF16295 Tetracyclin repressor-like, C-terminal domain HPY08_RS05305 PF00440 Bacterial regulatory proteins, tetR family HPY08_RS05310 PF09317 Domain of unknown function (DUF1974) HPY08_RS05310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain HPY08_RS05310 PF02770 Acyl-CoA dehydrogenase, middle domain HPY08_RS05310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain HPY08_RS05315 PF07055 Enoyl reductase FAD binding domain HPY08_RS05315 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY08_RS05315 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY08_RS05320 PF01176 Translation initiation factor 1A / IF-1 HPY08_RS05325 PF04376 Arginine-tRNA-protein transferase, N terminus HPY08_RS05325 PF04377 Arginine-tRNA-protein transferase, C terminus HPY08_RS05330 PF03588 Leucyl/phenylalanyl-tRNA protein transferase HPY08_RS05335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) HPY08_RS05340 PF10692 Protein of unknown function (DUF2498) HPY08_RS05345 PF01131 DNA topoisomerase HPY08_RS05345 PF08272 Topoisomerase I zinc-ribbon-like HPY08_RS05345 PF01396 Topoisomerase DNA binding C4 zinc finger HPY08_RS05345 PF01751 Toprim domain HPY08_RS05350 PF00483 Nucleotidyl transferase HPY08_RS05355 PF00534 Glycosyl transferases group 1 HPY08_RS05355 PF08323 Starch synthase catalytic domain HPY08_RS05375 PF04994 TfoX C-terminal domain HPY08_RS05375 PF04993 TfoX N-terminal domain HPY08_RS05380 PF00356 Bacterial regulatory proteins, lacI family HPY08_RS05385 PF02613 Nitrate reductase delta subunit HPY08_RS05390 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS05390 PF00072 Response regulator receiver domain HPY08_RS05395 PF02698 DUF218 domain HPY08_RS05400 PF13847 Methyltransferase domain HPY08_RS05405 PF03882 MukF winged-helix domain HPY08_RS05405 PF17193 MukF C-terminal domain HPY08_RS05405 PF17192 MukF middle domain HPY08_RS05410 PF04288 MukE-like family HPY08_RS05415 PF16330 MukB hinge domain HPY08_RS05415 PF04310 MukB N-terminal HPY08_RS05420 PF01037 Lrp/AsnC ligand binding domain HPY08_RS05425 PF01810 LysE type translocator HPY08_RS05430 PF11842 Domain of unknown function (DUF3362) HPY08_RS05430 PF04055 Radical SAM superfamily HPY08_RS05430 PF08497 Radical SAM N-terminal HPY08_RS05435 PF08447 PAS fold HPY08_RS05435 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS05435 PF08448 PAS fold HPY08_RS05435 PF00563 EAL domain HPY08_RS05440 PF05193 Peptidase M16 inactive domain HPY08_RS05440 PF00675 Insulinase (Peptidase family M16) HPY08_RS05455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS05455 PF03466 LysR substrate binding domain HPY08_RS05460 PF08267 Cobalamin-independent synthase, N-terminal domain HPY08_RS05460 PF01717 Cobalamin-independent synthase, Catalytic domain HPY08_RS05470 PF03795 YCII-related domain HPY08_RS05475 PF03061 Thioesterase superfamily HPY08_RS05480 PF04279 Intracellular septation protein A HPY08_RS05490 PF02698 DUF218 domain HPY08_RS05495 PF01370 NAD dependent epimerase/dehydratase family HPY08_RS05505 PF01226 Formate/nitrite transporter HPY08_RS05510 PF06796 Periplasmic nitrate reductase protein NapE HPY08_RS05515 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY08_RS05520 PF00384 Molybdopterin oxidoreductase HPY08_RS05520 PF18364 Molybdopterin oxidoreductase N-terminal domain HPY08_RS05520 PF01568 Molydopterin dinucleotide binding domain HPY08_RS05535 PF02833 DHHA2 domain HPY08_RS05535 PF01368 DHH family HPY08_RS05550 PF00005 ABC transporter HPY08_RS05555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY08_RS05555 PF00005 ABC transporter HPY08_RS05560 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY08_RS05560 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS05565 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS05570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY08_RS05575 PF00158 Sigma-54 interaction domain HPY08_RS05575 PF02954 Bacterial regulatory protein, Fis family HPY08_RS05580 PF04012 PspA/IM30 family HPY08_RS05595 PF00529 HlyD membrane-fusion protein of T1SS HPY08_RS05595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY08_RS05600 PF13533 Biotin-lipoyl like HPY08_RS05605 PF00873 AcrB/AcrD/AcrF family HPY08_RS05610 PF03352 Methyladenine glycosylase HPY08_RS05615 PF01053 Cys/Met metabolism PLP-dependent enzyme HPY08_RS05620 PF13091 PLD-like domain HPY08_RS05620 PF13396 Phospholipase_D-nuclease N-terminal HPY08_RS05625 PF00209 Sodium:neurotransmitter symporter family HPY08_RS05630 PF00849 RNA pseudouridylate synthase HPY08_RS05635 PF01066 CDP-alcohol phosphatidyltransferase HPY08_RS05640 PF00005 ABC transporter HPY08_RS05645 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS05650 PF13416 Bacterial extracellular solute-binding protein HPY08_RS05660 PF06945 Protein of unknown function (DUF1289) HPY08_RS05670 PF03222 Tryptophan/tyrosine permease family HPY08_RS05680 PF01769 Divalent cation transporter HPY08_RS05680 PF00571 CBS domain HPY08_RS05680 PF03448 MgtE intracellular N domain HPY08_RS05685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS05685 PF09308 LuxQ, periplasmic HPY08_RS05685 PF00072 Response regulator receiver domain HPY08_RS05685 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS05690 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS05690 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS05690 PF00563 EAL domain HPY08_RS05700 PF01752 Collagenase HPY08_RS05700 PF08453 Peptidase family M9 N-terminal HPY08_RS05700 PF04151 Bacterial pre-peptidase C-terminal domain HPY08_RS05710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY08_RS05710 PF12793 Sugar transport-related sRNA regulator N-term HPY08_RS05725 PF09101 Exotoxin A binding HPY08_RS05725 PF09009 Exotoxin A catalytic HPY08_RS05725 PF09102 Exotoxin A, targeting HPY08_RS05735 PF00672 HAMP domain HPY08_RS05735 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS05735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS05745 PF00563 EAL domain HPY08_RS05745 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS05745 PF00360 Phytochrome region HPY08_RS05745 PF01590 GAF domain HPY08_RS05750 PF01386 Ribosomal L25p family HPY08_RS05760 PF00072 Response regulator receiver domain HPY08_RS05760 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS05770 PF04851 Type III restriction enzyme, res subunit HPY08_RS05770 PF00271 Helicase conserved C-terminal domain HPY08_RS05775 PF00849 RNA pseudouridylate synthase HPY08_RS05775 PF01479 S4 domain HPY08_RS05780 PF07690 Major Facilitator Superfamily HPY08_RS05790 PF13460 NAD(P)H-binding HPY08_RS05790 PF11066 Protein of unknown function (DUF2867) HPY08_RS05795 PF01554 MatE HPY08_RS05800 PF00005 ABC transporter HPY08_RS05815 PF06965 Na+/H+ antiporter 1 HPY08_RS05820 PF00202 Aminotransferase class-III HPY08_RS05825 PF03435 Saccharopine dehydrogenase NADP binding domain HPY08_RS05825 PF16653 Saccharopine dehydrogenase C-terminal domain HPY08_RS05835 PF05736 OprF membrane domain HPY08_RS05835 PF00691 OmpA family HPY08_RS05840 PF02321 Outer membrane efflux protein HPY08_RS05880 PF01863 Protein of unknown function DUF45 HPY08_RS05885 PF05971 RNA methyltransferase HPY08_RS05915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY08_RS05930 PF00989 PAS fold HPY08_RS05930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS05930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain HPY08_RS05930 PF17203 Single cache domain 3 HPY08_RS05935 PF12431 Transcriptional regulator HPY08_RS05935 PF00072 Response regulator receiver domain HPY08_RS05945 PF01584 CheW-like domain HPY08_RS05945 PF00072 Response regulator receiver domain HPY08_RS05965 PF00072 Response regulator receiver domain HPY08_RS05965 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS05990 PF07690 Major Facilitator Superfamily HPY08_RS05995 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain HPY08_RS05995 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain HPY08_RS06000 PF08544 GHMP kinases C terminal HPY08_RS06000 PF00288 GHMP kinases N terminal domain HPY08_RS06000 PF10509 Galactokinase galactose-binding signature HPY08_RS06005 PF01263 Aldose 1-epimerase HPY08_RS06015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain HPY08_RS06015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY08_RS06015 PF00205 Thiamine pyrophosphate enzyme, central domain HPY08_RS06020 PF03306 Alpha-acetolactate decarboxylase HPY08_RS06025 PF03466 LysR substrate binding domain HPY08_RS06025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS06030 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) HPY08_RS06035 PF00361 Proton-conducting membrane transporter HPY08_RS06035 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY08_RS06040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS06040 PF03466 LysR substrate binding domain HPY08_RS06045 PF00501 AMP-binding enzyme HPY08_RS06045 PF13193 AMP-binding enzyme C-terminal domain HPY08_RS06075 PF00206 Lyase HPY08_RS06075 PF10415 Fumarase C C-terminus HPY08_RS06085 PF01654 Cytochrome bd terminal oxidase subunit I HPY08_RS06090 PF02322 Cytochrome bd terminal oxidase subunit II HPY08_RS06095 PF02687 FtsX-like permease family HPY08_RS06095 PF12704 MacB-like periplasmic core domain HPY08_RS06095 PF00005 ABC transporter HPY08_RS06100 PF02687 FtsX-like permease family HPY08_RS06100 PF00005 ABC transporter HPY08_RS06100 PF12704 MacB-like periplasmic core domain HPY08_RS06105 PF00005 ABC transporter HPY08_RS06105 PF12704 MacB-like periplasmic core domain HPY08_RS06105 PF02687 FtsX-like permease family HPY08_RS06115 PF00529 HlyD membrane-fusion protein of T1SS HPY08_RS06135 PF00709 Adenylosuccinate synthetase HPY08_RS06150 PF00977 Histidine biosynthesis protein HPY08_RS06155 PF00141 Peroxidase HPY08_RS06160 PF00232 Glycosyl hydrolase family 1 HPY08_RS06165 PF00356 Bacterial regulatory proteins, lacI family HPY08_RS06170 PF01042 Endoribonuclease L-PSP HPY08_RS06175 PF04074 YhcH/YjgK/YiaL HPY08_RS06180 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY08_RS06185 PF08220 DeoR-like helix-turn-helix domain HPY08_RS06185 PF00455 DeoR C terminal sensor domain HPY08_RS06190 PF00005 ABC transporter HPY08_RS06190 PF17912 MalK OB fold domain HPY08_RS06195 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS06200 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS06205 PF13416 Bacterial extracellular solute-binding protein HPY08_RS06215 PF01618 MotA/TolQ/ExbB proton channel family HPY08_RS06220 PF01618 MotA/TolQ/ExbB proton channel family HPY08_RS06225 PF02472 Biopolymer transport protein ExbD/TolR HPY08_RS06230 PF03544 Gram-negative bacterial TonB protein C-terminal HPY08_RS06240 PF01068 ATP dependent DNA ligase domain HPY08_RS06240 PF14743 DNA ligase OB-like domain HPY08_RS06250 PF01554 MatE HPY08_RS06260 PF03881 Fructosamine kinase HPY08_RS06270 PF00877 NlpC/P60 family HPY08_RS06275 PF00672 HAMP domain HPY08_RS06275 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS06275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS06290 PF00480 ROK family HPY08_RS06305 PF03454 MoeA C-terminal region (domain IV) HPY08_RS06305 PF03453 MoeA N-terminal region (domain I and II) HPY08_RS06305 PF00994 Probable molybdopterin binding domain HPY08_RS06310 PF12804 MobA-like NTP transferase domain HPY08_RS06315 PF08402 TOBE domain HPY08_RS06315 PF00005 ABC transporter HPY08_RS06320 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS06325 PF12849 PBP superfamily domain HPY08_RS06330 PF02954 Bacterial regulatory protein, Fis family HPY08_RS06330 PF00072 Response regulator receiver domain HPY08_RS06330 PF00158 Sigma-54 interaction domain HPY08_RS06335 PF00989 PAS fold HPY08_RS06335 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS06340 PF12848 ABC transporter HPY08_RS06340 PF00005 ABC transporter HPY08_RS06345 PF02634 FdhD/NarQ family HPY08_RS06365 PF02613 Nitrate reductase delta subunit HPY08_RS06375 PF01568 Molydopterin dinucleotide binding domain HPY08_RS06375 PF00384 Molybdopterin oxidoreductase HPY08_RS06375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY08_RS06380 PF13247 4Fe-4S dicluster domain HPY08_RS06395 PF02146 Sir2 family HPY08_RS06400 PF04461 Protein of unknown function (DUF520) HPY08_RS06405 PF00793 DAHP synthetase I family HPY08_RS06420 PF17783 CvfB-like winged helix domain HPY08_RS06420 PF13509 S1 domain HPY08_RS06425 PF01189 16S rRNA methyltransferase RsmB/F HPY08_RS06425 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF HPY08_RS06425 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF HPY08_RS06430 PF02470 MlaD protein HPY08_RS06435 PF04403 Paraquat-inducible protein A HPY08_RS06440 PF00664 ABC transporter transmembrane region HPY08_RS06440 PF00005 ABC transporter HPY08_RS06445 PF13185 GAF domain HPY08_RS06450 PF04352 ProQ/FINO family HPY08_RS06450 PF17516 ProQ C-terminal domain HPY08_RS06455 PF11818 C-terminal domain of tail specific protease (DUF3340) HPY08_RS06455 PF00595 PDZ domain HPY08_RS06455 PF03572 Peptidase family S41 HPY08_RS06455 PF17804 Tail specific protease N-terminal domain HPY08_RS06465 PF01433 Peptidase family M1 domain HPY08_RS06465 PF17432 Domain of unknown function (DUF3458_C) ARM repeats HPY08_RS06465 PF11940 Domain of unknown function (DUF3458) Ig-like fold HPY08_RS06475 PF05088 Bacterial NAD-glutamate dehydrogenase HPY08_RS06480 PF01180 Dihydroorotate dehydrogenase HPY08_RS06485 PF07126 Cell-division protein ZapC HPY08_RS06490 PF02926 THUMP domain HPY08_RS06490 PF10672 S-adenosylmethionine-dependent methyltransferase HPY08_RS06490 PF01170 Putative RNA methylase family UPF0020 HPY08_RS06510 PF04957 Ribosome modulation factor HPY08_RS06515 PF07977 FabA-like domain HPY08_RS06520 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY08_RS06520 PF13654 AAA domain HPY08_RS06525 PF06303 MatP N-terminal domain HPY08_RS06525 PF17414 MatP C-terminal ribbon-helix-helix domain HPY08_RS06600 PF12146 Serine aminopeptidase, S33 HPY08_RS06600 PF16671 Actin cross-linking domain HPY08_RS06600 PF07634 RtxA repeat HPY08_RS06600 PF11713 Peptidase C80 family HPY08_RS06600 PF11647 Membrane Localization Domain HPY08_RS06605 PF02794 RTX toxin acyltransferase family HPY08_RS06615 PF03412 Peptidase C39 family HPY08_RS06615 PF00005 ABC transporter HPY08_RS06615 PF00664 ABC transporter transmembrane region HPY08_RS06625 PF00005 ABC transporter HPY08_RS06625 PF00664 ABC transporter transmembrane region HPY08_RS06625 PF03412 Peptidase C39 family HPY08_RS06630 PF00072 Response regulator receiver domain HPY08_RS06630 PF09308 LuxQ, periplasmic HPY08_RS06630 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS06645 PF00115 Cytochrome C and Quinol oxidase polypeptide I HPY08_RS06660 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY08_RS06660 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP HPY08_RS06670 PF00403 Heavy-metal-associated domain HPY08_RS06685 PF00027 Cyclic nucleotide-binding domain HPY08_RS06685 PF13545 Crp-like helix-turn-helix domain HPY08_RS06690 PF00582 Universal stress protein family HPY08_RS06695 PF01797 Transposase IS200 like HPY08_RS06700 PF01171 PP-loop family HPY08_RS06720 PF08402 TOBE domain HPY08_RS06720 PF00005 ABC transporter HPY08_RS06725 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS06730 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS06735 PF13416 Bacterial extracellular solute-binding protein HPY08_RS06740 PF13416 Bacterial extracellular solute-binding protein HPY08_RS06755 PF01235 Sodium:alanine symporter family HPY08_RS06760 PF01810 LysE type translocator HPY08_RS06790 PF04717 Type VI secretion system, phage-baseplate injector HPY08_RS06790 PF16671 Actin cross-linking domain HPY08_RS06795 PF05638 Type VI secretion system effector, Hcp HPY08_RS06800 PF02074 Carboxypeptidase Taq (M32) metallopeptidase HPY08_RS06820 PF00270 DEAD/DEAH box helicase HPY08_RS06820 PF00271 Helicase conserved C-terminal domain HPY08_RS06825 PF00893 Small Multidrug Resistance protein HPY08_RS06830 PF03441 FAD binding domain of DNA photolyase HPY08_RS06830 PF00875 DNA photolyase HPY08_RS06835 PF07690 Major Facilitator Superfamily HPY08_RS06840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS06840 PF03466 LysR substrate binding domain HPY08_RS06850 PF01979 Amidohydrolase family HPY08_RS06855 PF03099 Biotin/lipoate A/B protein ligase family HPY08_RS06855 PF10437 Bacterial lipoate protein ligase C-terminus HPY08_RS06860 PF00012 Hsp70 protein HPY08_RS06870 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold HPY08_RS06870 PF00270 DEAD/DEAH box helicase HPY08_RS06870 PF11898 Domain of unknown function (DUF3418) HPY08_RS06870 PF00271 Helicase conserved C-terminal domain HPY08_RS06870 PF04408 Helicase associated domain (HA2) HPY08_RS06890 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS06890 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS06890 PF00563 EAL domain HPY08_RS06900 PF00012 Hsp70 protein HPY08_RS06905 PF00012 Hsp70 protein HPY08_RS06910 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS06910 PF17158 Membrane-associated sensor, integral membrane domain HPY08_RS06920 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS06920 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS06920 PF00563 EAL domain HPY08_RS06940 PF06508 Queuosine biosynthesis protein QueC HPY08_RS06945 PF04055 Radical SAM superfamily HPY08_RS06955 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY08_RS06955 PF14824 Sirohaem biosynthesis protein central HPY08_RS06955 PF10414 Sirohaem synthase dimerisation region HPY08_RS06960 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY08_RS06965 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS06970 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS06975 PF00005 ABC transporter HPY08_RS06980 PF01027 Inhibitor of apoptosis-promoting Bax1 HPY08_RS06985 PF04358 DsrC like protein HPY08_RS06990 PF00708 Acylphosphatase HPY08_RS06995 PF17785 PUA-like domain HPY08_RS06995 PF10672 S-adenosylmethionine-dependent methyltransferase HPY08_RS07005 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS07010 PF00462 Glutaredoxin HPY08_RS07010 PF08534 Redoxin HPY08_RS07015 PF00672 HAMP domain HPY08_RS07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS07015 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS07015 PF01627 Hpt domain HPY08_RS07015 PF00072 Response regulator receiver domain HPY08_RS07015 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) HPY08_RS07020 PF00072 Response regulator receiver domain HPY08_RS07025 PF02798 Glutathione S-transferase, N-terminal domain HPY08_RS07025 PF14497 Glutathione S-transferase, C-terminal domain HPY08_RS07035 PF04209 homogentisate 1,2-dioxygenase HPY08_RS07040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY08_RS07045 PF07687 Peptidase dimerisation domain HPY08_RS07045 PF01546 Peptidase family M20/M25/M40 HPY08_RS07060 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY08_RS07060 PF13193 AMP-binding enzyme C-terminal domain HPY08_RS07060 PF00501 AMP-binding enzyme HPY08_RS07065 PF04303 PrpF protein HPY08_RS07070 PF00694 Aconitase C-terminal domain HPY08_RS07070 PF00330 Aconitase family (aconitate hydratase) HPY08_RS07075 PF00285 Citrate synthase, C-terminal domain HPY08_RS07085 PF00392 Bacterial regulatory proteins, gntR family HPY08_RS07085 PF07729 FCD domain HPY08_RS07100 PF01970 Tripartite tricarboxylate transporter TctA family HPY08_RS07105 PF01797 Transposase IS200 like HPY08_RS07110 PF03466 LysR substrate binding domain HPY08_RS07110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS07115 PF07715 TonB-dependent Receptor Plug Domain HPY08_RS07115 PF00593 TonB dependent receptor HPY08_RS07140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY08_RS07140 PF00529 HlyD membrane-fusion protein of T1SS HPY08_RS07155 PF02653 Branched-chain amino acid transport system / permease component HPY08_RS07160 PF00005 ABC transporter HPY08_RS07165 PF13407 Periplasmic binding protein domain HPY08_RS07185 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS07185 PF00072 Response regulator receiver domain HPY08_RS07190 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS07190 PF00672 HAMP domain HPY08_RS07190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS07195 PF06629 MltA-interacting protein MipA HPY08_RS07200 PF04393 Protein of unknown function (DUF535) HPY08_RS07205 PF02954 Bacterial regulatory protein, Fis family HPY08_RS07205 PF00158 Sigma-54 interaction domain HPY08_RS07205 PF00072 Response regulator receiver domain HPY08_RS07210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS07210 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY08_RS07210 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS07215 PF00939 Sodium:sulfate symporter transmembrane region HPY08_RS07220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS07220 PF00672 HAMP domain HPY08_RS07225 PF00842 Alanine racemase, C-terminal domain HPY08_RS07225 PF01168 Alanine racemase, N-terminal domain HPY08_RS07230 PF00892 EamA-like transporter family HPY08_RS07240 PF13302 Acetyltransferase (GNAT) domain HPY08_RS07245 PF00158 Sigma-54 interaction domain HPY08_RS07245 PF18024 Helix-turn-helix domain HPY08_RS07250 PF05128 Domain of unknown function (DUF697) HPY08_RS07255 PF04317 YcjX-like family, DUF463 HPY08_RS07270 PF04715 Anthranilate synthase component I, N terminal region HPY08_RS07270 PF00425 chorismate binding enzyme HPY08_RS07275 PF00293 NUDIX domain HPY08_RS07280 PF03222 Tryptophan/tyrosine permease family HPY08_RS07285 PF03313 Serine dehydratase alpha chain HPY08_RS07285 PF03315 Serine dehydratase beta chain HPY08_RS07290 PF01242 6-pyruvoyl tetrahydropterin synthase HPY08_RS07295 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS07295 PF00672 HAMP domain HPY08_RS07295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS07300 PF00152 tRNA synthetases class II (D, K and N) HPY08_RS07300 PF01336 OB-fold nucleic acid binding domain HPY08_RS07305 PF02581 Thiamine monophosphate synthase HPY08_RS07305 PF08543 Phosphomethylpyrimidine kinase HPY08_RS07310 PF01966 HD domain HPY08_RS07310 PF00672 HAMP domain HPY08_RS07315 PF00155 Aminotransferase class I and II HPY08_RS07325 PF17657 Bacterial DNA polymerase III alpha subunit finger domain HPY08_RS07325 PF14579 Helix-hairpin-helix motif HPY08_RS07325 PF00929 Exonuclease HPY08_RS07325 PF07733 Bacterial DNA polymerase III alpha NTPase domain HPY08_RS07325 PF02811 PHP domain HPY08_RS07330 PF17200 Single Cache domain 2 HPY08_RS07330 PF00672 HAMP domain HPY08_RS07330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS07335 PF04349 Periplasmic glucan biosynthesis protein, MdoG HPY08_RS07340 PF13506 Glycosyl transferase family 21 HPY08_RS07345 PF02028 BCCT, betaine/carnitine/choline family transporter HPY08_RS07350 PF01047 MarR family HPY08_RS07355 PF00072 Response regulator receiver domain HPY08_RS07355 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS07360 PF07730 Histidine kinase HPY08_RS07360 PF17200 Single Cache domain 2 HPY08_RS07365 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component HPY08_RS07375 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY08_RS07390 PF00753 Metallo-beta-lactamase superfamily HPY08_RS07395 PF05951 Bacterial protein of unknown function (DUF882) HPY08_RS07425 PF00925 GTP cyclohydrolase II HPY08_RS07435 PF07690 Major Facilitator Superfamily HPY08_RS07450 PF03989 DNA gyrase C-terminal domain, beta-propeller HPY08_RS07450 PF00521 DNA gyrase/topoisomerase IV, subunit A HPY08_RS07460 PF00317 Ribonucleotide reductase, all-alpha domain HPY08_RS07460 PF02867 Ribonucleotide reductase, barrel domain HPY08_RS07460 PF03477 ATP cone domain HPY08_RS07465 PF00268 Ribonucleotide reductase, small chain HPY08_RS07470 PF00970 Oxidoreductase FAD-binding domain HPY08_RS07470 PF00175 Oxidoreductase NAD-binding domain HPY08_RS07470 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY08_RS07480 PF00994 Probable molybdopterin binding domain HPY08_RS07495 PF00672 HAMP domain HPY08_RS07495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS07495 PF17200 Single Cache domain 2 HPY08_RS07510 PF00005 ABC transporter HPY08_RS07515 PF01032 FecCD transport family HPY08_RS07520 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family HPY08_RS07530 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase HPY08_RS07535 PF02654 Cobalamin-5-phosphate synthase HPY08_RS07540 PF02277 Phosphoribosyltransferase HPY08_RS07545 PF01641 SelR domain HPY08_RS07555 PF08411 Exonuclease C-terminal HPY08_RS07555 PF00929 Exonuclease HPY08_RS07560 PF03788 LrgA family HPY08_RS07565 PF04172 LrgB-like family HPY08_RS07570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY08_RS07570 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region HPY08_RS07580 PF02222 ATP-grasp domain HPY08_RS07585 PF05724 Thiopurine S-methyltransferase (TPMT) HPY08_RS07595 PF00216 Bacterial DNA-binding protein HPY08_RS07600 PF01588 Putative tRNA binding domain HPY08_RS07600 PF03147 Ferredoxin-fold anticodon binding domain HPY08_RS07600 PF03484 tRNA synthetase B5 domain HPY08_RS07600 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain HPY08_RS07600 PF03483 B3/4 domain HPY08_RS07605 PF01409 tRNA synthetases class II core domain (F) HPY08_RS07605 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain HPY08_RS07615 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS07615 PF00072 Response regulator receiver domain HPY08_RS07640 PF01066 CDP-alcohol phosphatidyltransferase HPY08_RS07645 PF01541 GIY-YIG catalytic domain HPY08_RS07645 PF02151 UvrB/uvrC motif HPY08_RS07645 PF08459 UvrC Helix-hairpin-helix N-terminal HPY08_RS07650 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS07650 PF00072 Response regulator receiver domain HPY08_RS07655 PF00136 DNA polymerase family B HPY08_RS07655 PF03104 DNA polymerase family B, exonuclease domain HPY08_RS07660 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS07660 PF00563 EAL domain HPY08_RS07660 PF13426 PAS domain HPY08_RS07670 PF09285 Elongation factor P, C-terminal HPY08_RS07670 PF01132 Elongation factor P (EF-P) OB domain HPY08_RS07670 PF08207 Elongation factor P (EF-P) KOW-like domain HPY08_RS07675 PF04269 Protein of unknown function, DUF440 HPY08_RS07685 PF00392 Bacterial regulatory proteins, gntR family HPY08_RS07685 PF07702 UTRA domain HPY08_RS07690 PF01979 Amidohydrolase family HPY08_RS07695 PF00491 Arginase family HPY08_RS07700 PF17391 Urocanase N-terminal domain HPY08_RS07700 PF17392 Urocanase C-terminal domain HPY08_RS07700 PF01175 Urocanase Rossmann-like domain HPY08_RS07705 PF00221 Aromatic amino acid lyase HPY08_RS07715 PF00089 Trypsin HPY08_RS07720 PF04191 Phospholipid methyltransferase HPY08_RS07725 PF01565 FAD binding domain HPY08_RS07725 PF02913 FAD linked oxidases, C-terminal domain HPY08_RS07725 PF13183 4Fe-4S dicluster domain HPY08_RS07740 PF13488 Glycine zipper HPY08_RS07740 PF00691 OmpA family HPY08_RS07760 PF01259 SAICAR synthetase HPY08_RS07770 PF00390 Malic enzyme, N-terminal domain HPY08_RS07770 PF03949 Malic enzyme, NAD binding domain HPY08_RS07780 PF02698 DUF218 domain HPY08_RS07785 PF08448 PAS fold HPY08_RS07785 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS07790 PF00266 Aminotransferase class-V HPY08_RS07800 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS07805 PF00664 ABC transporter transmembrane region HPY08_RS07805 PF00005 ABC transporter HPY08_RS07810 PF00005 ABC transporter HPY08_RS07810 PF00664 ABC transporter transmembrane region HPY08_RS07815 PF01479 S4 domain HPY08_RS07815 PF00849 RNA pseudouridylate synthase HPY08_RS07820 PF01300 Telomere recombination HPY08_RS07825 PF02811 PHP domain HPY08_RS07830 PF08056 Tryptophan operon leader peptide HPY08_RS07835 PF04715 Anthranilate synthase component I, N terminal region HPY08_RS07835 PF00425 chorismate binding enzyme HPY08_RS07840 PF00117 Glutamine amidotransferase class-I HPY08_RS07845 PF02885 Glycosyl transferase family, helical bundle domain HPY08_RS07845 PF00591 Glycosyl transferase family, a/b domain HPY08_RS07850 PF00218 Indole-3-glycerol phosphate synthase HPY08_RS07850 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase HPY08_RS07855 PF00291 Pyridoxal-phosphate dependent enzyme HPY08_RS07860 PF00290 Tryptophan synthase alpha chain HPY08_RS07865 PF00375 Sodium:dicarboxylate symporter family HPY08_RS07870 PF00265 Thymidine kinase HPY08_RS07875 PF00152 tRNA synthetases class II (D, K and N) HPY08_RS07875 PF02938 GAD domain HPY08_RS07875 PF01336 OB-fold nucleic acid binding domain HPY08_RS07880 PF01904 Protein of unknown function DUF72 HPY08_RS07885 PF13649 Methyltransferase domain HPY08_RS07890 PF08003 Protein of unknown function (DUF1698) HPY08_RS07895 PF18030 RimK PreATP-grasp domain HPY08_RS07895 PF08443 RimK-like ATP-grasp domain HPY08_RS07910 PF00266 Aminotransferase class-V HPY08_RS07920 PF00989 PAS fold HPY08_RS07920 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS07935 PF04994 TfoX C-terminal domain HPY08_RS07935 PF04993 TfoX N-terminal domain HPY08_RS07945 PF03956 Lysine exporter LysO HPY08_RS07955 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY08_RS07960 PF01418 Helix-turn-helix domain, rpiR family HPY08_RS07960 PF01380 SIS domain HPY08_RS07965 PF00465 Iron-containing alcohol dehydrogenase HPY08_RS07965 PF00171 Aldehyde dehydrogenase family HPY08_RS07970 PF00462 Glutaredoxin HPY08_RS07975 PF06826 Predicted Permease Membrane Region HPY08_RS07975 PF02080 TrkA-C domain HPY08_RS07980 PF00004 ATPase family associated with various cellular activities (AAA) HPY08_RS07980 PF10431 C-terminal, D2-small domain, of ClpB protein HPY08_RS07980 PF02861 Clp amino terminal domain, pathogenicity island component HPY08_RS07980 PF17871 AAA lid domain HPY08_RS07980 PF07724 AAA domain (Cdc48 subfamily) HPY08_RS07985 PF02617 ATP-dependent Clp protease adaptor protein ClpS HPY08_RS07990 PF00313 'Cold-shock' DNA-binding domain HPY08_RS07995 PF03971 Monomeric isocitrate dehydrogenase HPY08_RS08000 PF00849 RNA pseudouridylate synthase HPY08_RS08005 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase HPY08_RS08005 PF01502 Phosphoribosyl-AMP cyclohydrolase HPY08_RS08010 PF00977 Histidine biosynthesis protein HPY08_RS08015 PF00977 Histidine biosynthesis protein HPY08_RS08020 PF00117 Glutamine amidotransferase class-I HPY08_RS08025 PF08645 Polynucleotide kinase 3 phosphatase HPY08_RS08025 PF00475 Imidazoleglycerol-phosphate dehydratase HPY08_RS08030 PF00155 Aminotransferase class I and II HPY08_RS08035 PF00815 Histidinol dehydrogenase HPY08_RS08040 PF01634 ATP phosphoribosyltransferase HPY08_RS08040 PF08029 HisG, C-terminal domain HPY08_RS08045 PF03553 Na+/H+ antiporter family HPY08_RS08050 PF00816 H-NS histone family HPY08_RS08055 PF00294 pfkB family carbohydrate kinase HPY08_RS08065 PF04356 Protein of unknown function (DUF489) HPY08_RS08070 PF08328 Adenylosuccinate lyase C-terminal HPY08_RS08070 PF00206 Lyase HPY08_RS08080 PF16036 Chalcone isomerase-like HPY08_RS08105 PF00106 short chain dehydrogenase HPY08_RS08115 PF01435 Peptidase family M48 HPY08_RS08130 PF08241 Methyltransferase domain HPY08_RS08135 PF00155 Aminotransferase class I and II HPY08_RS08140 PF06968 Biotin and Thiamin Synthesis associated domain HPY08_RS08140 PF04055 Radical SAM superfamily HPY08_RS08145 PF00202 Aminotransferase class-III HPY08_RS08150 PF02403 Seryl-tRNA synthetase N-terminal domain HPY08_RS08150 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY08_RS08155 PF16193 AAA C-terminal domain HPY08_RS08155 PF00004 ATPase family associated with various cellular activities (AAA) HPY08_RS08155 PF12002 MgsA AAA+ ATPase C terminal HPY08_RS08160 PF03548 Outer membrane lipoprotein carrier protein LolA HPY08_RS08165 PF07517 SecA DEAD-like domain HPY08_RS08165 PF02810 SEC-C motif HPY08_RS08165 PF07516 SecA Wing and Scaffold domain HPY08_RS08165 PF01043 SecA preprotein cross-linking domain HPY08_RS08170 PF01207 Dihydrouridine synthase (Dus) HPY08_RS08175 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS08180 PF00005 ABC transporter HPY08_RS08185 PF02653 Branched-chain amino acid transport system / permease component HPY08_RS08195 PF09905 DNA-binding protein VF530 HPY08_RS08200 PF04217 Protein of unknown function, DUF412 HPY08_RS08205 PF00871 Acetokinase family HPY08_RS08210 PF07085 DRTGG domain HPY08_RS08210 PF01515 Phosphate acetyl/butaryl transferase HPY08_RS08215 PF13409 Glutathione S-transferase, N-terminal domain HPY08_RS08220 PF00005 ABC transporter HPY08_RS08220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY08_RS08225 PF00005 ABC transporter HPY08_RS08225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY08_RS08230 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY08_RS08230 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS08235 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS08240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY08_RS08250 PF00072 Response regulator receiver domain HPY08_RS08250 PF13188 PAS domain HPY08_RS08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS08250 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS08250 PF08448 PAS fold HPY08_RS08255 PF00158 Sigma-54 interaction domain HPY08_RS08255 PF02954 Bacterial regulatory protein, Fis family HPY08_RS08255 PF00072 Response regulator receiver domain HPY08_RS08260 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS08260 PF00563 EAL domain HPY08_RS08260 PF13188 PAS domain HPY08_RS08260 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS08265 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS08265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS08270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS08270 PF13188 PAS domain HPY08_RS08270 PF00989 PAS fold HPY08_RS08270 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS08270 PF13426 PAS domain HPY08_RS08280 PF00072 Response regulator receiver domain HPY08_RS08295 PF03481 Putative GTP-binding controlling metal-binding HPY08_RS08295 PF01300 Telomere recombination HPY08_RS08310 PF01161 Phosphatidylethanolamine-binding protein HPY08_RS08320 PF00704 Glycosyl hydrolases family 18 HPY08_RS08320 PF06483 Chitinase C HPY08_RS08335 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY08_RS08335 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY08_RS08340 PF01022 Bacterial regulatory protein, arsR family HPY08_RS08355 PF00664 ABC transporter transmembrane region HPY08_RS08355 PF03412 Peptidase C39 family HPY08_RS08355 PF00005 ABC transporter HPY08_RS08365 PF00005 ABC transporter HPY08_RS08365 PF00664 ABC transporter transmembrane region HPY08_RS08365 PF03412 Peptidase C39 family HPY08_RS08400 PF08463 EcoEI R protein C-terminal HPY08_RS08400 PF00271 Helicase conserved C-terminal domain HPY08_RS08400 PF04851 Type III restriction enzyme, res subunit HPY08_RS08400 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) HPY08_RS08410 PF12161 HsdM N-terminal domain HPY08_RS08410 PF02384 N-6 DNA Methylase HPY08_RS08450 PF08448 PAS fold HPY08_RS08450 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS08460 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY08_RS08475 PF13404 AsnC-type helix-turn-helix domain HPY08_RS08475 PF01037 Lrp/AsnC ligand binding domain HPY08_RS08480 PF00291 Pyridoxal-phosphate dependent enzyme HPY08_RS08485 PF08496 Peptidase family S49 N-terminal HPY08_RS08485 PF01343 Peptidase family S49 HPY08_RS08490 PF00106 short chain dehydrogenase HPY08_RS08495 PF03692 Putative zinc- or iron-chelating domain HPY08_RS08500 PF03692 Putative zinc- or iron-chelating domain HPY08_RS08505 PF13662 Toprim domain HPY08_RS08505 PF02132 RecR protein HPY08_RS08510 PF02575 YbaB/EbfC DNA-binding family HPY08_RS08515 PF12170 DNA polymerase III tau subunit V interacting with alpha HPY08_RS08515 PF12169 DNA polymerase III subunits gamma and tau domain III HPY08_RS08515 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding HPY08_RS08520 PF00156 Phosphoribosyl transferase domain HPY08_RS08525 PF04304 Protein of unknown function (DUF454) HPY08_RS08530 PF00072 Response regulator receiver domain HPY08_RS08535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS08535 PF03466 LysR substrate binding domain HPY08_RS08540 PF00881 Nitroreductase family HPY08_RS08545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY08_RS08545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY08_RS08545 PF00378 Enoyl-CoA hydratase/isomerase HPY08_RS08550 PF02803 Thiolase, C-terminal domain HPY08_RS08550 PF00108 Thiolase, N-terminal domain HPY08_RS08555 PF08281 Sigma-70, region 4 HPY08_RS08555 PF04542 Sigma-70 region 2 HPY08_RS08565 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY08_RS08570 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY08_RS08575 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY08_RS08580 PF12557 Cob(I)alamin adenosyltransferase N terminal HPY08_RS08580 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP HPY08_RS08585 PF05170 AsmA family HPY08_RS08590 PF00485 Phosphoribulokinase / Uridine kinase family HPY08_RS08595 PF10609 NUBPL iron-transfer P-loop NTPase HPY08_RS08600 PF09334 tRNA synthetases class I (M) HPY08_RS08600 PF01588 Putative tRNA binding domain HPY08_RS08610 PF01048 Phosphorylase superfamily HPY08_RS08615 PF00403 Heavy-metal-associated domain HPY08_RS08620 PF00571 CBS domain HPY08_RS08620 PF01743 Poly A polymerase head domain HPY08_RS08625 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS08625 PF07694 5TMR of 5TMR-LYT HPY08_RS08630 PF02391 MoaE protein HPY08_RS08635 PF02597 ThiS family HPY08_RS08640 PF01967 MoaC family HPY08_RS08645 PF00994 Probable molybdopterin binding domain HPY08_RS08650 PF04055 Radical SAM superfamily HPY08_RS08650 PF06463 Molybdenum Cofactor Synthesis C HPY08_RS08655 PF01933 Uncharacterised protein family UPF0052 HPY08_RS08660 PF01627 Hpt domain HPY08_RS08665 PF00158 Sigma-54 interaction domain HPY08_RS08665 PF02954 Bacterial regulatory protein, Fis family HPY08_RS08665 PF00072 Response regulator receiver domain HPY08_RS08670 PF17757 UvrB interaction domain HPY08_RS08670 PF12344 Ultra-violet resistance protein B HPY08_RS08670 PF00271 Helicase conserved C-terminal domain HPY08_RS08670 PF02151 UvrB/uvrC motif HPY08_RS08670 PF04851 Type III restriction enzyme, res subunit HPY08_RS08680 PF02508 Rnf-Nqr subunit, membrane protein HPY08_RS08685 PF04060 Putative Fe-S cluster HPY08_RS08690 PF12838 4Fe-4S dicluster domain HPY08_RS08690 PF13375 RnfC Barrel sandwich hybrid domain HPY08_RS08690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit HPY08_RS08690 PF10531 SLBB domain HPY08_RS08695 PF03116 NQR2, RnfD, RnfE family HPY08_RS08700 PF04205 FMN-binding domain HPY08_RS08705 PF02508 Rnf-Nqr subunit, membrane protein HPY08_RS08710 PF10576 Iron-sulfur binding domain of endonuclease III HPY08_RS08710 PF00633 Helix-hairpin-helix motif HPY08_RS08710 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY08_RS08715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY08_RS08720 PF10952 Protein of unknown function (DUF2753) HPY08_RS08725 PF18393 MotY N-terminal domain HPY08_RS08725 PF00691 OmpA family HPY08_RS08730 PF00929 Exonuclease HPY08_RS08735 PF03553 Na+/H+ antiporter family HPY08_RS08735 PF13726 Na+-H+ antiporter family HPY08_RS08740 PF00156 Phosphoribosyl transferase domain HPY08_RS08745 PF02674 Colicin V production protein HPY08_RS08750 PF05036 Sporulation related domain HPY08_RS08755 PF02875 Mur ligase family, glutamate ligase domain HPY08_RS08755 PF08245 Mur ligase middle domain HPY08_RS08760 PF01039 Carboxyl transferase domain HPY08_RS08760 PF17848 Acetyl-coA carboxylase zinc finger domain HPY08_RS08765 PF01416 tRNA pseudouridine synthase HPY08_RS08775 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain HPY08_RS08775 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY08_RS08780 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY08_RS08780 PF00367 phosphotransferase system, EIIB HPY08_RS08780 PF02378 Phosphotransferase system, EIIC HPY08_RS08785 PF01979 Amidohydrolase family HPY08_RS08790 PF00480 ROK family HPY08_RS08790 PF01047 MarR family HPY08_RS08795 PF02254 TrkA-N domain HPY08_RS08795 PF00999 Sodium/hydrogen exchanger family HPY08_RS08800 PF00733 Asparagine synthase HPY08_RS08800 PF13537 Glutamine amidotransferase domain HPY08_RS08805 PF02357 Transcription termination factor nusG HPY08_RS08810 PF00854 POT family HPY08_RS08815 PF00762 Ferrochelatase HPY08_RS08820 PF05191 Adenylate kinase, active site lid HPY08_RS08825 PF00183 Hsp90 protein HPY08_RS08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS08830 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS08835 PF17323 Trans-membrane regulatory protein ToxS HPY08_RS08845 PF12850 Calcineurin-like phosphoesterase superfamily domain HPY08_RS08850 PF01370 NAD dependent epimerase/dehydratase family HPY08_RS08850 PF08338 Domain of unknown function (DUF1731) HPY08_RS08855 PF00106 short chain dehydrogenase HPY08_RS08860 PF00085 Thioredoxin HPY08_RS08865 PF01145 SPFH domain / Band 7 family HPY08_RS08865 PF16200 C-terminal region of band_7 HPY08_RS08870 PF01957 NfeD-like C-terminal, partner-binding HPY08_RS08875 PF13411 MerR HTH family regulatory protein HPY08_RS08885 PF13609 Gram-negative porin HPY08_RS08890 PF01653 NAD-dependent DNA ligase adenylation domain HPY08_RS08890 PF00533 BRCA1 C Terminus (BRCT) domain HPY08_RS08890 PF03119 NAD-dependent DNA ligase C4 zinc finger domain HPY08_RS08890 PF03120 NAD-dependent DNA ligase OB-fold domain HPY08_RS08890 PF12826 Helix-hairpin-helix motif HPY08_RS08895 PF04354 ZipA, C-terminal FtsZ-binding domain HPY08_RS08905 PF00291 Pyridoxal-phosphate dependent enzyme HPY08_RS08910 PF00381 PTS HPr component phosphorylation site HPY08_RS08915 PF05524 PEP-utilising enzyme, N-terminal HPY08_RS08915 PF02896 PEP-utilising enzyme, TIM barrel domain HPY08_RS08915 PF00391 PEP-utilising enzyme, mobile domain HPY08_RS08920 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HPY08_RS08925 PF01494 FAD binding domain HPY08_RS08930 PF04055 Radical SAM superfamily HPY08_RS08930 PF01938 TRAM domain HPY08_RS08930 PF00919 Uncharacterized protein family UPF0004 HPY08_RS08935 PF02562 PhoH-like protein HPY08_RS08940 PF02130 Uncharacterized protein family UPF0054 HPY08_RS08945 PF03471 Transporter associated domain HPY08_RS08945 PF00571 CBS domain HPY08_RS08950 PF00795 Carbon-nitrogen hydrolase HPY08_RS08955 PF07295 Zinc-ribbon containing domain HPY08_RS08960 PF00133 tRNA synthetases class I (I, L, M and V) HPY08_RS08960 PF08264 Anticodon-binding domain of tRNA HPY08_RS08960 PF13603 Leucyl-tRNA synthetase, Domain 2 HPY08_RS08965 PF04390 Lipopolysaccharide-assembly HPY08_RS08970 PF14840 Processivity clamp loader gamma complex DNA pol III C-term HPY08_RS08970 PF06144 DNA polymerase III, delta subunit HPY08_RS08980 PF02590 Predicted SPOUT methyltransferase HPY08_RS08985 PF03717 Penicillin-binding Protein dimerisation domain HPY08_RS08985 PF00905 Penicillin binding protein transpeptidase domain HPY08_RS08990 PF01098 Cell cycle protein HPY08_RS08995 PF05036 Sporulation related domain HPY08_RS08995 PF03330 Lytic transglycolase HPY08_RS09000 PF00768 D-alanyl-D-alanine carboxypeptidase HPY08_RS09000 PF07943 Penicillin-binding protein 5, C-terminal domain HPY08_RS09005 PF04359 Protein of unknown function (DUF493) HPY08_RS09010 PF03099 Biotin/lipoate A/B protein ligase family HPY08_RS09015 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family HPY08_RS09015 PF04055 Radical SAM superfamily HPY08_RS09025 PF00464 Serine hydroxymethyltransferase HPY08_RS09045 PF02706 Chain length determinant protein HPY08_RS09045 PF13614 AAA domain HPY08_RS09045 PF13807 G-rich domain on putative tyrosine kinase HPY08_RS09050 PF02563 Polysaccharide biosynthesis/export protein HPY08_RS09050 PF10531 SLBB domain HPY08_RS09050 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HPY08_RS09060 PF02397 Bacterial sugar transferase HPY08_RS09075 PF17945 Beta/Gamma crystallin HPY08_RS09075 PF12561 ToxR activated gene A lipoprotein domain HPY08_RS09090 PF03808 Glycosyl transferase WecB/TagA/CpsF family HPY08_RS09100 PF00534 Glycosyl transferases group 1 HPY08_RS09100 PF00862 Sucrose synthase HPY08_RS09110 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS09130 PF14602 Hexapeptide repeat of succinyl-transferase HPY08_RS09130 PF12464 Maltose acetyltransferase HPY08_RS09135 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain HPY08_RS09135 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY08_RS09135 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY08_RS09140 PF02350 UDP-N-acetylglucosamine 2-epimerase HPY08_RS09145 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY08_RS09150 PF00873 AcrB/AcrD/AcrF family HPY08_RS09155 PF13533 Biotin-lipoyl like HPY08_RS09180 PF16657 Maltogenic Amylase, C-terminal domain HPY08_RS09180 PF00128 Alpha amylase, catalytic domain HPY08_RS09185 PF02378 Phosphotransferase system, EIIC HPY08_RS09185 PF00367 phosphotransferase system, EIIB HPY08_RS09190 PF00356 Bacterial regulatory proteins, lacI family HPY08_RS09200 PF00005 ABC transporter HPY08_RS09200 PF09383 NIL domain HPY08_RS09205 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS09210 PF03180 NLPA lipoprotein HPY08_RS09215 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) HPY08_RS09220 PF07348 Syd protein (SUKH-2) HPY08_RS09225 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term HPY08_RS09225 PF14489 QueF-like protein HPY08_RS09235 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS09240 PF03641 Possible lysine decarboxylase HPY08_RS09240 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases HPY08_RS09240 PF11892 Domain of unknown function (DUF3412) HPY08_RS09245 PF01367 5'-3' exonuclease, C-terminal SAM fold HPY08_RS09245 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain HPY08_RS09250 PF04241 Protein of unknown function (DUF423) HPY08_RS09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS09255 PF03466 LysR substrate binding domain HPY08_RS09260 PF02926 THUMP domain HPY08_RS09260 PF02568 Thiamine biosynthesis protein (ThiI) HPY08_RS09265 PF13677 Membrane MotB of proton-channel complex MotA/MotB HPY08_RS09265 PF00691 OmpA family HPY08_RS09270 PF01618 MotA/TolQ/ExbB proton channel family HPY08_RS09275 PF02609 Exonuclease VII small subunit HPY08_RS09280 PF00348 Polyprenyl synthetase HPY08_RS09285 PF02779 Transketolase, pyrimidine binding domain HPY08_RS09285 PF02780 Transketolase, C-terminal domain HPY08_RS09285 PF13292 1-deoxy-D-xylulose-5-phosphate synthase HPY08_RS09290 PF00849 RNA pseudouridylate synthase HPY08_RS09295 PF04287 tRNA pseudouridine synthase C HPY08_RS09310 PF13302 Acetyltransferase (GNAT) domain HPY08_RS09320 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 HPY08_RS09325 PF03806 AbgT putative transporter family HPY08_RS09330 PF00444 Ribosomal protein L36 HPY08_RS09335 PF01197 Ribosomal protein L31 HPY08_RS09340 PF01980 tRNA-methyltransferase O HPY08_RS09340 PF18389 TrmO C-terminal domain HPY08_RS09345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY08_RS09345 PF04073 Aminoacyl-tRNA editing domain HPY08_RS09345 PF03129 Anticodon binding domain HPY08_RS09355 PF06786 Uncharacterised protein family (UPF0253) HPY08_RS09365 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal HPY08_RS09365 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain HPY08_RS09365 PF02769 AIR synthase related protein, C-terminal domain HPY08_RS09375 PF01464 Transglycosylase SLT domain HPY08_RS09375 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY08_RS09380 PF14437 MafB19-like deaminase HPY08_RS09385 PF03806 AbgT putative transporter family HPY08_RS09410 PF00114 Pilin (bacterial filament) HPY08_RS09410 PF07963 Prokaryotic N-terminal methylation motif HPY08_RS09415 PF01556 DnaJ C terminal domain HPY08_RS09415 PF00226 DnaJ domain HPY08_RS09415 PF00684 DnaJ central domain HPY08_RS09420 PF00012 Hsp70 protein HPY08_RS09425 PF01025 GrpE HPY08_RS09430 PF01513 ATP-NAD kinase HPY08_RS09435 PF02463 RecF/RecN/SMC N terminal domain HPY08_RS09440 PF04355 SmpA / OmlA family HPY08_RS09445 PF03658 RnfH family Ubiquitin HPY08_RS09450 PF03364 Polyketide cyclase / dehydrase and lipid transport HPY08_RS09455 PF01668 SmpB protein HPY08_RS09485 PF00270 DEAD/DEAH box helicase HPY08_RS09485 PF00271 Helicase conserved C-terminal domain HPY08_RS09510 PF00037 4Fe-4S binding domain HPY08_RS09510 PF11953 Domain of unknown function (DUF3470) HPY08_RS09515 PF08032 RNA 2'-O ribose methyltransferase substrate binding HPY08_RS09515 PF00588 SpoU rRNA Methylase family HPY08_RS09525 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase HPY08_RS09530 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HPY08_RS09535 PF04223 Citrate lyase, alpha subunit (CitF) HPY08_RS09540 PF03328 HpcH/HpaI aldolase/citrate lyase family HPY08_RS09545 PF06857 Malonate decarboxylase delta subunit (MdcD) HPY08_RS09550 PF08218 Citrate lyase ligase C-terminal domain HPY08_RS09555 PF03390 2-hydroxycarboxylate transporter family HPY08_RS09560 PF04277 Oxaloacetate decarboxylase, gamma chain HPY08_RS09565 PF02436 Conserved carboxylase domain HPY08_RS09565 PF00364 Biotin-requiring enzyme HPY08_RS09565 PF00682 HMGL-like HPY08_RS09570 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY08_RS09575 PF17203 Single cache domain 3 HPY08_RS09575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS09580 PF12431 Transcriptional regulator HPY08_RS09580 PF00072 Response regulator receiver domain HPY08_RS09600 PF01266 FAD dependent oxidoreductase HPY08_RS09605 PF01235 Sodium:alanine symporter family HPY08_RS09610 PF14864 Alkyl sulfatase C-terminal HPY08_RS09610 PF14863 Alkyl sulfatase dimerisation HPY08_RS09610 PF00753 Metallo-beta-lactamase superfamily HPY08_RS09615 PF03466 LysR substrate binding domain HPY08_RS09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS09620 PF01648 4'-phosphopantetheinyl transferase superfamily HPY08_RS09620 PF17837 4'-phosphopantetheinyl transferase N-terminal domain HPY08_RS09625 PF00005 ABC transporter HPY08_RS09630 PF01032 FecCD transport family HPY08_RS09635 PF01032 FecCD transport family HPY08_RS09640 PF01497 Periplasmic binding protein HPY08_RS09655 PF00425 chorismate binding enzyme HPY08_RS09660 PF13193 AMP-binding enzyme C-terminal domain HPY08_RS09660 PF00501 AMP-binding enzyme HPY08_RS09665 PF00857 Isochorismatase family HPY08_RS09665 PF00550 Phosphopantetheine attachment site HPY08_RS09670 PF01184 GPR1/FUN34/yaaH family HPY08_RS09675 PF00704 Glycosyl hydrolases family 18 HPY08_RS09675 PF06483 Chitinase C HPY08_RS09680 PF01510 N-acetylmuramoyl-L-alanine amidase HPY08_RS09685 PF05199 GMC oxidoreductase HPY08_RS09685 PF00732 GMC oxidoreductase HPY08_RS09690 PF02540 NAD synthase HPY08_RS09690 PF00958 GMP synthase C terminal domain HPY08_RS09690 PF00117 Glutamine amidotransferase class-I HPY08_RS09695 PF00571 CBS domain HPY08_RS09695 PF00478 IMP dehydrogenase / GMP reductase domain HPY08_RS09700 PF02601 Exonuclease VII, large subunit HPY08_RS09700 PF13742 OB-fold nucleic acid binding domain HPY08_RS09715 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal HPY08_RS09715 PF01926 50S ribosome-binding GTPase HPY08_RS09720 PF13360 PQQ-like domain HPY08_RS09725 PF09976 Tetratricopeptide repeat-like domain HPY08_RS09730 PF13393 Histidyl-tRNA synthetase HPY08_RS09730 PF03129 Anticodon binding domain HPY08_RS09735 PF04551 GcpE protein HPY08_RS09740 PF13464 Domain of unknown function (DUF4115) HPY08_RS09745 PF04055 Radical SAM superfamily HPY08_RS09750 PF00334 Nucleoside diphosphate kinase HPY08_RS09755 PF12404 Peptidase HPY08_RS09755 PF00883 Cytosol aminopeptidase family, catalytic domain HPY08_RS09760 PF04384 Iron-sulphur cluster assembly HPY08_RS09765 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY08_RS09770 PF00012 Hsp70 protein HPY08_RS09775 PF00226 DnaJ domain HPY08_RS09775 PF07743 HSCB C-terminal oligomerisation domain HPY08_RS09780 PF01521 Iron-sulphur cluster biosynthesis HPY08_RS09785 PF01592 NifU-like N terminal domain HPY08_RS09790 PF00266 Aminotransferase class-V HPY08_RS09795 PF02082 Transcriptional regulator HPY08_RS09800 PF00588 SpoU rRNA Methylase family HPY08_RS09805 PF00459 Inositol monophosphatase family HPY08_RS09810 PF02355 Protein export membrane protein HPY08_RS09810 PF07549 SecD/SecF GG Motif HPY08_RS09815 PF02355 Protein export membrane protein HPY08_RS09815 PF07549 SecD/SecF GG Motif HPY08_RS09815 PF13721 SecD export protein N-terminal TM region HPY08_RS09820 PF02699 Preprotein translocase subunit HPY08_RS09825 PF01702 Queuine tRNA-ribosyltransferase HPY08_RS09830 PF02547 Queuosine biosynthesis protein HPY08_RS09835 PF00571 CBS domain HPY08_RS09840 PF00463 Isocitrate lyase family HPY08_RS09845 PF01274 Malate synthase HPY08_RS09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS09850 PF03466 LysR substrate binding domain HPY08_RS09855 PF10417 C-terminal domain of 1-Cys peroxiredoxin HPY08_RS09855 PF00578 AhpC/TSA family HPY08_RS09860 PF03932 CutC family HPY08_RS09865 PF03976 Polyphosphate kinase 2 (PPK2) HPY08_RS09870 PF01895 PhoU domain HPY08_RS09875 PF00005 ABC transporter HPY08_RS09880 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS09885 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS09890 PF02503 Polyphosphate kinase middle domain HPY08_RS09890 PF13090 Polyphosphate kinase C-terminal domain 2 HPY08_RS09890 PF17941 Polyphosphate kinase C-terminal domain 1 HPY08_RS09890 PF13089 Polyphosphate kinase N-terminal domain HPY08_RS09895 PF02541 Ppx/GppA phosphatase family HPY08_RS09900 PF12849 PBP superfamily domain HPY08_RS09905 PF11808 Phosphate regulon sensor protein PhoR HPY08_RS09905 PF00989 PAS fold HPY08_RS09905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS09905 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS09910 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS09910 PF00072 Response regulator receiver domain HPY08_RS09915 PF04381 Putative exonuclease, RdgC HPY08_RS09925 PF00037 4Fe-4S binding domain HPY08_RS09930 PF00881 Nitroreductase family HPY08_RS09970 PF02861 Clp amino terminal domain, pathogenicity island component HPY08_RS09970 PF17871 AAA lid domain HPY08_RS09970 PF00004 ATPase family associated with various cellular activities (AAA) HPY08_RS09970 PF10431 C-terminal, D2-small domain, of ClpB protein HPY08_RS09970 PF07724 AAA domain (Cdc48 subfamily) HPY08_RS09980 PF01479 S4 domain HPY08_RS09980 PF00849 RNA pseudouridylate synthase HPY08_RS09985 PF13525 Outer membrane lipoprotein HPY08_RS09990 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein HPY08_RS09995 PF00800 Prephenate dehydratase HPY08_RS09995 PF01817 Chorismate mutase type II HPY08_RS10000 PF13416 Bacterial extracellular solute-binding protein HPY08_RS10005 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS10005 PF00563 EAL domain HPY08_RS10010 PF01931 Protein of unknown function DUF84 HPY08_RS10015 PF01371 Trp repressor protein HPY08_RS10020 PF01464 Transglycosylase SLT domain HPY08_RS10020 PF14718 Soluble lytic murein transglycosylase L domain HPY08_RS10025 PF00005 ABC transporter HPY08_RS10025 PF12848 ABC transporter HPY08_RS10030 PF07238 PilZ domain HPY08_RS10035 PF02153 Prephenate dehydrogenase HPY08_RS10035 PF01817 Chorismate mutase type II HPY08_RS10040 PF00793 DAHP synthetase I family HPY08_RS10045 PF07694 5TMR of 5TMR-LYT HPY08_RS10045 PF06580 Histidine kinase HPY08_RS10050 PF00072 Response regulator receiver domain HPY08_RS10050 PF04397 LytTr DNA-binding domain HPY08_RS10055 PF00933 Glycosyl hydrolase family 3 N terminal domain HPY08_RS10060 PF03702 Anhydro-N-acetylmuramic acid kinase HPY08_RS10065 PF13580 SIS domain HPY08_RS10080 PF02554 Carbon starvation protein CstA HPY08_RS10085 PF02401 LytB protein HPY08_RS10090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY08_RS10095 PF01252 Signal peptidase (SPase) II HPY08_RS10100 PF00133 tRNA synthetases class I (I, L, M and V) HPY08_RS10100 PF08264 Anticodon-binding domain of tRNA HPY08_RS10100 PF06827 Zinc finger found in FPG and IleRS HPY08_RS10105 PF01687 Riboflavin kinase HPY08_RS10105 PF06574 FAD synthetase HPY08_RS10110 PF03023 Lipid II flippase MurJ HPY08_RS10115 PF01649 Ribosomal protein S20 HPY08_RS10120 PF01022 Bacterial regulatory protein, arsR family HPY08_RS10125 PF03466 LysR substrate binding domain HPY08_RS10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS10130 PF02690 Na+/Pi-cotransporter HPY08_RS10135 PF00303 Thymidylate synthase HPY08_RS10140 PF01790 Prolipoprotein diacylglyceryl transferase HPY08_RS10145 PF01925 Sulfite exporter TauE/SafE HPY08_RS10150 PF00391 PEP-utilising enzyme, mobile domain HPY08_RS10150 PF05524 PEP-utilising enzyme, N-terminal HPY08_RS10150 PF02896 PEP-utilising enzyme, TIM barrel domain HPY08_RS10150 PF01590 GAF domain HPY08_RS10155 PF00293 NUDIX domain HPY08_RS10160 PF02976 DNA mismatch repair enzyme MutH HPY08_RS10165 PF00248 Aldo/keto reductase family HPY08_RS10175 PF00072 Response regulator receiver domain HPY08_RS10175 PF02954 Bacterial regulatory protein, Fis family HPY08_RS10175 PF00158 Sigma-54 interaction domain HPY08_RS10180 PF00152 tRNA synthetases class II (D, K and N) HPY08_RS10180 PF01336 OB-fold nucleic acid binding domain HPY08_RS10190 PF05525 Branched-chain amino acid transport protein HPY08_RS10195 PF05175 Methyltransferase small domain HPY08_RS10200 PF00271 Helicase conserved C-terminal domain HPY08_RS10200 PF00270 DEAD/DEAH box helicase HPY08_RS10205 PF16658 Class II release factor RF3, C-terminal domain HPY08_RS10205 PF00009 Elongation factor Tu GTP binding domain HPY08_RS10205 PF03144 Elongation factor Tu domain 2 HPY08_RS10210 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS10210 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS10210 PF00563 EAL domain HPY08_RS10225 PF13508 Acetyltransferase (GNAT) domain HPY08_RS10230 PF02036 SCP-2 sterol transfer family HPY08_RS10235 PF00563 EAL domain HPY08_RS10235 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS10235 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS10240 PF01136 Peptidase family U32 HPY08_RS10245 PF01136 Peptidase family U32 HPY08_RS10260 PF13181 Tetratricopeptide repeat HPY08_RS10260 PF07719 Tetratricopeptide repeat HPY08_RS10265 PF01138 3' exoribonuclease family, domain 1 HPY08_RS10265 PF00013 KH domain HPY08_RS10265 PF00575 S1 RNA binding domain HPY08_RS10265 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain HPY08_RS10265 PF03725 3' exoribonuclease family, domain 2 HPY08_RS10270 PF00312 Ribosomal protein S15 HPY08_RS10275 PF01509 TruB family pseudouridylate synthase (N terminal domain) HPY08_RS10275 PF16198 tRNA pseudouridylate synthase B C-terminal domain HPY08_RS10275 PF09157 Pseudouridine synthase II TruB, C-terminal HPY08_RS10280 PF02033 Ribosome-binding factor A HPY08_RS10285 PF11987 Translation-initiation factor 2 HPY08_RS10285 PF08364 Bacterial translation initiation factor IF-2 associated region HPY08_RS10285 PF04760 Translation initiation factor IF-2, N-terminal region HPY08_RS10285 PF00009 Elongation factor Tu GTP binding domain HPY08_RS10290 PF13184 NusA-like KH domain HPY08_RS10290 PF00575 S1 RNA binding domain HPY08_RS10290 PF08529 NusA N-terminal domain HPY08_RS10295 PF17384 RimP C-terminal SH3 domain HPY08_RS10295 PF02576 RimP N-terminal domain HPY08_RS10310 PF03840 Preprotein translocase SecG subunit HPY08_RS10315 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY08_RS10315 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY08_RS10315 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY08_RS10315 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY08_RS10320 PF00809 Pterin binding enzyme HPY08_RS10325 PF00004 ATPase family associated with various cellular activities (AAA) HPY08_RS10325 PF06480 FtsH Extracellular HPY08_RS10325 PF17862 AAA+ lid domain HPY08_RS10325 PF01434 Peptidase family M41 HPY08_RS10330 PF01728 FtsJ-like methyltransferase HPY08_RS10335 PF01985 CRS1 / YhbY (CRM) domain HPY08_RS10340 PF03449 Transcription elongation factor, N-terminal HPY08_RS10340 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY08_RS10345 PF13609 Gram-negative porin HPY08_RS10350 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family HPY08_RS10355 PF00579 tRNA synthetases class I (W and Y) HPY08_RS10355 PF01479 S4 domain HPY08_RS10360 PF01551 Peptidase family M23 HPY08_RS10360 PF04225 Opacity-associated protein A LysM-like domain HPY08_RS10365 PF00873 AcrB/AcrD/AcrF family HPY08_RS10375 PF01521 Iron-sulphur cluster biosynthesis HPY08_RS10380 PF00202 Aminotransferase class-III HPY08_RS10385 PF01594 AI-2E family transporter HPY08_RS10390 PF05175 Methyltransferase small domain HPY08_RS10390 PF08468 Methyltransferase small domain N-terminal HPY08_RS10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS10395 PF00072 Response regulator receiver domain HPY08_RS10395 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS10395 PF09308 LuxQ, periplasmic HPY08_RS10400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY08_RS10405 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS10410 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS10410 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY08_RS10415 PF00005 ABC transporter HPY08_RS10415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY08_RS10420 PF00005 ABC transporter HPY08_RS10420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY08_RS10430 PF01869 BadF/BadG/BcrA/BcrD ATPase family HPY08_RS10435 PF00728 Glycosyl hydrolase family 20, catalytic domain HPY08_RS10435 PF02838 Glycosyl hydrolase family 20, domain 2 HPY08_RS10440 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain HPY08_RS10440 PF06165 Glycosyltransferase family 36 HPY08_RS10445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY08_RS10445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY08_RS10445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY08_RS10445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY08_RS10450 PF00005 ABC transporter HPY08_RS10450 PF08402 TOBE domain HPY08_RS10460 PF13416 Bacterial extracellular solute-binding protein HPY08_RS10465 PF00909 Ammonium Transporter Family HPY08_RS10470 PF00543 Nitrogen regulatory protein P-II HPY08_RS10475 PF06062 Uncharacterised protein family (UPF0231) HPY08_RS10480 PF06434 Aconitate hydratase 2 N-terminus HPY08_RS10480 PF11791 Aconitate B N-terminal domain HPY08_RS10480 PF00330 Aconitase family (aconitate hydratase) HPY08_RS10485 PF01734 Patatin-like phospholipase HPY08_RS10490 PF00912 Transglycosylase HPY08_RS10490 PF00905 Penicillin binding protein transpeptidase domain HPY08_RS10490 PF14814 Bifunctional transglycosylase second domain HPY08_RS10495 PF00270 DEAD/DEAH box helicase HPY08_RS10495 PF04408 Helicase associated domain (HA2) HPY08_RS10495 PF00271 Helicase conserved C-terminal domain HPY08_RS10495 PF08482 ATP-dependent helicase C-terminal HPY08_RS10505 PF03749 Sugar fermentation stimulation protein RE domain HPY08_RS10505 PF17746 SfsA N-terminal OB domain HPY08_RS10510 PF01258 Prokaryotic dksA/traR C4-type zinc finger HPY08_RS10515 PF00749 tRNA synthetases class I (E and Q), catalytic domain HPY08_RS10520 PF12627 Probable RNA and SrmB- binding site of polymerase A HPY08_RS10520 PF12626 Polymerase A arginine-rich C-terminus HPY08_RS10520 PF01743 Poly A polymerase head domain HPY08_RS10525 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY08_RS10530 PF02548 Ketopantoate hydroxymethyltransferase HPY08_RS10535 PF02569 Pantoate-beta-alanine ligase HPY08_RS10540 PF01061 ABC-2 type transporter HPY08_RS10545 PF00005 ABC transporter HPY08_RS10550 PF01740 STAS domain HPY08_RS10550 PF00916 Sulfate permease family HPY08_RS10555 PF00484 Carbonic anhydrase HPY08_RS10560 PF00156 Phosphoribosyl transferase domain HPY08_RS10565 PF00440 Bacterial regulatory proteins, tetR family HPY08_RS10570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases HPY08_RS10575 PF04348 LppC putative lipoprotein HPY08_RS10580 PF02021 Uncharacterised protein family UPF0102 HPY08_RS10585 PF13580 SIS domain HPY08_RS10590 PF04972 BON domain HPY08_RS10595 PF04386 Stringent starvation protein B HPY08_RS10600 PF00043 Glutathione S-transferase, C-terminal domain HPY08_RS10600 PF02798 Glutathione S-transferase, N-terminal domain HPY08_RS10605 PF02167 Cytochrome C1 family HPY08_RS10610 PF00032 Cytochrome b(C-terminal)/b6/petD HPY08_RS10610 PF00033 Cytochrome b/b6/petB HPY08_RS10615 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal HPY08_RS10615 PF00355 Rieske [2Fe-2S] domain HPY08_RS10620 PF00380 Ribosomal protein S9/S16 HPY08_RS10625 PF00572 Ribosomal protein L13 HPY08_RS10630 PF03969 AFG1-like ATPase HPY08_RS10640 PF00595 PDZ domain HPY08_RS10645 PF13180 PDZ domain HPY08_RS10650 PF01245 Ribosomal protein L19 HPY08_RS10655 PF01746 tRNA (Guanine-1)-methyltransferase HPY08_RS10660 PF05239 PRC-barrel domain HPY08_RS10660 PF01782 RimM N-terminal domain HPY08_RS10665 PF00886 Ribosomal protein S16 HPY08_RS10670 PF02978 Signal peptide binding domain HPY08_RS10670 PF00448 SRP54-type protein, GTPase domain HPY08_RS10670 PF02881 SRP54-type protein, helical bundle domain HPY08_RS10675 PF01578 Cytochrome C assembly protein HPY08_RS10680 PF03471 Transporter associated domain HPY08_RS10680 PF00571 CBS domain HPY08_RS10680 PF01595 Cyclin M transmembrane N-terminal domain HPY08_RS10685 PF02664 S-Ribosylhomocysteinase (LuxS) HPY08_RS10690 PF04262 Glutamate-cysteine ligase HPY08_RS10695 PF00675 Insulinase (Peptidase family M16) HPY08_RS10695 PF05193 Peptidase M16 inactive domain HPY08_RS10700 PF09335 SNARE associated Golgi protein HPY08_RS10710 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit HPY08_RS10715 PF02436 Conserved carboxylase domain HPY08_RS10715 PF00682 HMGL-like HPY08_RS10715 PF00364 Biotin-requiring enzyme HPY08_RS10720 PF04277 Oxaloacetate decarboxylase, gamma chain HPY08_RS10765 PF02599 Global regulator protein family HPY08_RS10770 PF13840 ACT domain HPY08_RS10770 PF01842 ACT domain HPY08_RS10770 PF00696 Amino acid kinase family HPY08_RS10775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY08_RS10775 PF01411 tRNA synthetases class II (A) HPY08_RS10775 PF02272 DHHA1 domain HPY08_RS10780 PF02631 RecX family HPY08_RS10785 PF00154 recA bacterial DNA recombination protein HPY08_RS10790 PF02464 Competence-damaged protein HPY08_RS10795 PF00005 ABC transporter HPY08_RS10795 PF12857 TOBE-like domain HPY08_RS10800 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS10805 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS10815 PF00291 Pyridoxal-phosphate dependent enzyme HPY08_RS10820 PF00488 MutS domain V HPY08_RS10820 PF05192 MutS domain III HPY08_RS10820 PF05188 MutS domain II HPY08_RS10820 PF05190 MutS family domain IV HPY08_RS10820 PF01624 MutS domain I HPY08_RS10825 PF04545 Sigma-70, region 4 HPY08_RS10825 PF04539 Sigma-70 region 3 HPY08_RS10825 PF04542 Sigma-70 region 2 HPY08_RS10825 PF00140 Sigma-70 factor, region 1.2 HPY08_RS10830 PF01551 Peptidase family M23 HPY08_RS10830 PF01476 LysM domain HPY08_RS10840 PF01975 Survival protein SurE HPY08_RS10845 PF01142 tRNA pseudouridine synthase D (TruD) HPY08_RS10850 PF02542 YgbB family HPY08_RS10855 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase HPY08_RS10860 PF04977 Septum formation initiator HPY08_RS10865 PF02673 Bacitracin resistance protein BacA HPY08_RS10870 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) HPY08_RS10875 PF02152 Dihydroneopterin aldolase HPY08_RS10880 PF02660 Glycerol-3-phosphate acyltransferase HPY08_RS10885 PF00561 alpha/beta hydrolase fold HPY08_RS10890 PF00814 Glycoprotease family HPY08_RS10895 PF01165 Ribosomal protein S21 HPY08_RS10900 PF09424 Yqey-like protein HPY08_RS10905 PF08278 DNA primase DnaG DnaB-binding HPY08_RS10905 PF10410 DnaB-helicase binding domain of primase HPY08_RS10905 PF01807 CHC2 zinc finger HPY08_RS10905 PF08275 DNA primase catalytic core, N-terminal domain HPY08_RS10910 PF04539 Sigma-70 region 3 HPY08_RS10910 PF04545 Sigma-70, region 4 HPY08_RS10910 PF00140 Sigma-70 factor, region 1.2 HPY08_RS10910 PF03979 Sigma-70 factor, region 1.1 HPY08_RS10910 PF04542 Sigma-70 region 2 HPY08_RS10910 PF04546 Sigma-70, non-essential region HPY08_RS10925 PF03480 Bacterial extracellular solute-binding protein, family 7 HPY08_RS10930 PF01380 SIS domain HPY08_RS10935 PF00455 DeoR C terminal sensor domain HPY08_RS10935 PF08220 DeoR-like helix-turn-helix domain HPY08_RS10940 PF00224 Pyruvate kinase, barrel domain HPY08_RS10940 PF02887 Pyruvate kinase, alpha/beta domain HPY08_RS10945 PF04402 Protein of unknown function (DUF541) HPY08_RS10950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS10950 PF03466 LysR substrate binding domain HPY08_RS10955 PF01810 LysE type translocator HPY08_RS10960 PF00924 Mechanosensitive ion channel HPY08_RS10960 PF05552 Conserved TM helix HPY08_RS10965 PF01116 Fructose-bisphosphate aldolase class-II HPY08_RS10970 PF00162 Phosphoglycerate kinase HPY08_RS10975 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY08_RS10975 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY08_RS10980 PF00593 TonB dependent receptor HPY08_RS10980 PF07715 TonB-dependent Receptor Plug Domain HPY08_RS10985 PF03466 LysR substrate binding domain HPY08_RS10985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS10990 PF02779 Transketolase, pyrimidine binding domain HPY08_RS10990 PF00456 Transketolase, thiamine diphosphate binding domain HPY08_RS10990 PF02780 Transketolase, C-terminal domain HPY08_RS10995 PF02773 S-adenosylmethionine synthetase, C-terminal domain HPY08_RS10995 PF02772 S-adenosylmethionine synthetase, central domain HPY08_RS10995 PF00438 S-adenosylmethionine synthetase, N-terminal domain HPY08_RS11000 PF10263 SprT-like family HPY08_RS11000 PF17283 SprT-like zinc ribbon domain HPY08_RS11005 PF04231 Endonuclease I HPY08_RS11010 PF04452 RNA methyltransferase HPY08_RS11015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain HPY08_RS11015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain HPY08_RS11020 PF02622 Uncharacterized ACR, COG1678 HPY08_RS11025 PF03652 Holliday junction resolvase HPY08_RS11030 PF00579 tRNA synthetases class I (W and Y) HPY08_RS11030 PF01479 S4 domain HPY08_RS11040 PF00437 Type II/IV secretion system protein HPY08_RS11045 PF00437 Type II/IV secretion system protein HPY08_RS11050 PF01168 Alanine racemase, N-terminal domain HPY08_RS11055 PF03807 NADP oxidoreductase coenzyme F420-dependent HPY08_RS11055 PF14748 Pyrroline-5-carboxylate reductase dimerisation HPY08_RS11060 PF02325 YGGT family HPY08_RS11065 PF02594 Uncharacterised ACR, YggU family COG1872 HPY08_RS11075 PF01725 Ham1 family HPY08_RS11080 PF06969 HemN C-terminal domain HPY08_RS11080 PF04055 Radical SAM superfamily HPY08_RS11085 PF04960 Glutaminase HPY08_RS11090 PF02390 Putative methyltransferase HPY08_RS11095 PF00633 Helix-hairpin-helix motif HPY08_RS11095 PF10576 Iron-sulfur binding domain of endonuclease III HPY08_RS11095 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY08_RS11095 PF14815 NUDIX domain HPY08_RS11100 PF04362 Bacterial Fe(2+) trafficking HPY08_RS11105 PF01464 Transglycosylase SLT domain HPY08_RS11105 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain HPY08_RS11130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS11130 PF00672 HAMP domain HPY08_RS11130 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS11160 PF05099 Tellurite resistance protein TerB HPY08_RS11160 PF00226 DnaJ domain HPY08_RS11165 PF03968 OstA-like protein HPY08_RS11165 PF04453 LPS transport system D HPY08_RS11170 PF09312 SurA N-terminal domain HPY08_RS11175 PF04166 Pyridoxal phosphate biosynthetic protein PdxA HPY08_RS11180 PF00398 Ribosomal RNA adenine dimethylase HPY08_RS11185 PF04379 ApaG domain HPY08_RS11190 PF00149 Calcineurin-like phosphoesterase HPY08_RS11195 PF00186 Dihydrofolate reductase HPY08_RS11200 PF12821 Threonine/Serine exporter, ThrE HPY08_RS11205 PF06738 Putative threonine/serine exporter HPY08_RS11210 PF01018 GTP1/OBG HPY08_RS11210 PF01926 50S ribosome-binding GTPase HPY08_RS11215 PF01016 Ribosomal L27 protein HPY08_RS11220 PF00829 Ribosomal prokaryotic L21 protein HPY08_RS11225 PF00348 Polyprenyl synthetase HPY08_RS11230 PF13520 Amino acid permease HPY08_RS11235 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain HPY08_RS11235 PF00056 lactate/malate dehydrogenase, NAD binding domain HPY08_RS11240 PF02863 Arginine repressor, C-terminal domain HPY08_RS11240 PF01316 Arginine repressor, DNA binding domain HPY08_RS11245 PF16868 NMT1-like family HPY08_RS11255 PF00582 Universal stress protein family HPY08_RS11270 PF06877 Regulator of ribonuclease activity B HPY08_RS11280 PF01523 Putative modulator of DNA gyrase HPY08_RS11285 PF00795 Carbon-nitrogen hydrolase HPY08_RS11290 PF13502 AsmA-like C-terminal region HPY08_RS11290 PF13116 Protein of unknown function HPY08_RS11295 PF10150 Ribonuclease E/G family HPY08_RS11295 PF00575 S1 RNA binding domain HPY08_RS11300 PF02545 Maf-like protein HPY08_RS11305 PF04093 rod shape-determining protein MreD HPY08_RS11310 PF04085 rod shape-determining protein MreC HPY08_RS11345 PF08334 Type II secretion system (T2SS), protein G HPY08_RS11345 PF07963 Prokaryotic N-terminal methylation motif HPY08_RS11350 PF07963 Prokaryotic N-terminal methylation motif HPY08_RS11350 PF00114 Pilin (bacterial filament) HPY08_RS11360 PF00482 Type II secretion system (T2SS), protein F HPY08_RS11365 PF00437 Type II/IV secretion system protein HPY08_RS11375 PF01471 Putative peptidoglycan binding domain HPY08_RS11375 PF13401 AAA domain HPY08_RS11380 PF00263 Bacterial type II and III secretion system protein HPY08_RS11380 PF03958 Bacterial type II/III secretion system short domain HPY08_RS11400 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS11400 PF17157 Gammaproteobacterial periplasmic sensor domain HPY08_RS11400 PF00563 EAL domain HPY08_RS11405 PF00436 Single-strand binding protein family HPY08_RS11410 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS11415 PF00483 Nucleotidyl transferase HPY08_RS11420 PF17760 UvrA interaction domain HPY08_RS11420 PF00005 ABC transporter HPY08_RS11420 PF17755 UvrA DNA-binding domain HPY08_RS11430 PF00266 Aminotransferase class-V HPY08_RS11435 PF00696 Amino acid kinase family HPY08_RS11435 PF01842 ACT domain HPY08_RS11440 PF02607 B12 binding domain HPY08_RS11440 PF02574 Homocysteine S-methyltransferase HPY08_RS11440 PF02310 B12 binding domain HPY08_RS11440 PF02965 Vitamin B12 dependent methionine synthase, activation domain HPY08_RS11440 PF00809 Pterin binding enzyme HPY08_RS11515 PF01507 Phosphoadenosine phosphosulfate reductase family HPY08_RS11520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain HPY08_RS11520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain HPY08_RS11525 PF00258 Flavodoxin HPY08_RS11525 PF00667 FAD binding domain HPY08_RS11525 PF00175 Oxidoreductase NAD-binding domain HPY08_RS11545 PF09583 Phage shock protein G (Phageshock_PspG) HPY08_RS11550 PF01207 Dihydrouridine synthase (Dus) HPY08_RS11555 PF01475 Ferric uptake regulator family HPY08_RS11565 PF12706 Beta-lactamase superfamily domain HPY08_RS11570 PF00342 Phosphoglucose isomerase HPY08_RS11575 PF01894 Uncharacterised protein family UPF0047 HPY08_RS11580 PF01168 Alanine racemase, N-terminal domain HPY08_RS11580 PF00842 Alanine racemase, C-terminal domain HPY08_RS11585 PF00772 DnaB-like helicase N terminal domain HPY08_RS11585 PF03796 DnaB-like helicase C terminal domain HPY08_RS11595 PF01281 Ribosomal protein L9, N-terminal domain HPY08_RS11595 PF03948 Ribosomal protein L9, C-terminal domain HPY08_RS11600 PF01084 Ribosomal protein S18 HPY08_RS11605 PF00436 Single-strand binding protein family HPY08_RS11610 PF01250 Ribosomal protein S6 HPY08_RS11615 PF00210 Ferritin-like domain HPY08_RS11620 PF04324 BFD-like [2Fe-2S] binding domain HPY08_RS11625 PF03143 Elongation factor Tu C-terminal domain HPY08_RS11625 PF03144 Elongation factor Tu domain 2 HPY08_RS11625 PF00009 Elongation factor Tu GTP binding domain HPY08_RS11630 PF03144 Elongation factor Tu domain 2 HPY08_RS11630 PF00009 Elongation factor Tu GTP binding domain HPY08_RS11630 PF14492 Elongation Factor G, domain II HPY08_RS11630 PF03764 Elongation factor G, domain IV HPY08_RS11630 PF00679 Elongation factor G C-terminus HPY08_RS11635 PF00177 Ribosomal protein S7p/S5e HPY08_RS11640 PF00164 Ribosomal protein S12/S23 HPY08_RS11650 PF02635 DsrE/DsrF-like family HPY08_RS11655 PF02635 DsrE/DsrF-like family HPY08_RS11660 PF13309 HTH domain HPY08_RS11660 PF08348 YheO-like PAS domain HPY08_RS11665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY08_RS11665 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY08_RS11675 PF04102 SlyX HPY08_RS11680 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) HPY08_RS11685 PF01145 SPFH domain / Band 7 family HPY08_RS11690 PF01145 SPFH domain / Band 7 family HPY08_RS11690 PF12221 Bacterial membrane protein N terminal HPY08_RS11695 PF16360 GTP-binding GTPase Middle Region HPY08_RS11695 PF01926 50S ribosome-binding GTPase HPY08_RS11695 PF13167 GTP-binding GTPase N-terminal HPY08_RS11700 PF17209 Hfq protein HPY08_RS11710 PF08676 MutL C terminal dimerisation domain HPY08_RS11710 PF01119 DNA mismatch repair protein, C-terminal domain HPY08_RS11715 PF01520 N-acetylmuramoyl-L-alanine amidase HPY08_RS11720 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE HPY08_RS11725 PF08331 Domain of unknown function (DUF1730) HPY08_RS11770 PF00929 Exonuclease HPY08_RS11775 PF03193 RsgA GTPase HPY08_RS11780 PF02666 Phosphatidylserine decarboxylase HPY08_RS11785 PF00939 Sodium:sulfate symporter transmembrane region HPY08_RS11795 PF06415 BPG-independent PGAM N-terminus (iPGM_N) HPY08_RS11795 PF01676 Metalloenzyme superfamily HPY08_RS11800 PF01551 Peptidase family M23 HPY08_RS11810 PF00440 Bacterial regulatory proteins, tetR family HPY08_RS11810 PF08360 QacR-like protein, C-terminal region HPY08_RS11815 PF01208 Uroporphyrinogen decarboxylase (URO-D) HPY08_RS11820 PF09297 NADH pyrophosphatase zinc ribbon domain HPY08_RS11820 PF00293 NUDIX domain HPY08_RS11825 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ HPY08_RS11830 PF04997 RNA polymerase Rpb1, domain 1 HPY08_RS11830 PF04983 RNA polymerase Rpb1, domain 3 HPY08_RS11830 PF05000 RNA polymerase Rpb1, domain 4 HPY08_RS11830 PF04998 RNA polymerase Rpb1, domain 5 HPY08_RS11830 PF00623 RNA polymerase Rpb1, domain 2 HPY08_RS11835 PF04563 RNA polymerase beta subunit HPY08_RS11835 PF10385 RNA polymerase beta subunit external 1 domain HPY08_RS11835 PF04565 RNA polymerase Rpb2, domain 3 HPY08_RS11835 PF04560 RNA polymerase Rpb2, domain 7 HPY08_RS11835 PF04561 RNA polymerase Rpb2, domain 2 HPY08_RS11835 PF00562 RNA polymerase Rpb2, domain 6 HPY08_RS11840 PF00542 Ribosomal protein L7/L12 C-terminal domain HPY08_RS11840 PF16320 Ribosomal protein L7/L12 dimerisation domain HPY08_RS11845 PF00466 Ribosomal protein L10 HPY08_RS11850 PF00687 Ribosomal protein L1p/L10e family HPY08_RS11855 PF03946 Ribosomal protein L11, N-terminal domain HPY08_RS11855 PF00298 Ribosomal protein L11, RNA binding domain HPY08_RS11860 PF00467 KOW motif HPY08_RS11860 PF02357 Transcription termination factor nusG HPY08_RS11865 PF00584 SecE/Sec61-gamma subunits of protein translocation complex HPY08_RS11870 PF00009 Elongation factor Tu GTP binding domain HPY08_RS11870 PF03144 Elongation factor Tu domain 2 HPY08_RS11870 PF03143 Elongation factor Tu C-terminal domain HPY08_RS11895 PF00485 Phosphoribulokinase / Uridine kinase family HPY08_RS11900 PF02237 Biotin protein ligase C terminal domain HPY08_RS11900 PF03099 Biotin/lipoate A/B protein ligase family HPY08_RS11900 PF08279 HTH domain HPY08_RS11905 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain HPY08_RS11905 PF01565 FAD binding domain HPY08_RS11915 PF13091 PLD-like domain HPY08_RS11950 PF00175 Oxidoreductase NAD-binding domain HPY08_RS11955 PF00175 Oxidoreductase NAD-binding domain HPY08_RS11955 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY08_RS11955 PF00970 Oxidoreductase FAD-binding domain HPY08_RS11960 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HPY08_RS11970 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY08_RS11970 PF07497 Rho termination factor, RNA-binding domain HPY08_RS11970 PF07498 Rho termination factor, N-terminal domain HPY08_RS11975 PF00085 Thioredoxin HPY08_RS11980 PF00271 Helicase conserved C-terminal domain HPY08_RS11980 PF00270 DEAD/DEAH box helicase HPY08_RS11985 PF02541 Ppx/GppA phosphatase family HPY08_RS11990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS11990 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS11990 PF09456 RcsC Alpha-Beta-Loop (ABL) HPY08_RS11990 PF00072 Response regulator receiver domain HPY08_RS11995 PF12832 MFS_1 like family HPY08_RS12010 PF00501 AMP-binding enzyme HPY08_RS12010 PF13193 AMP-binding enzyme C-terminal domain HPY08_RS12010 PF16177 Acetyl-coenzyme A synthetase N-terminus HPY08_RS12015 PF01220 Dehydroquinase class II HPY08_RS12020 PF00364 Biotin-requiring enzyme HPY08_RS12025 PF02785 Biotin carboxylase C-terminal domain HPY08_RS12025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain HPY08_RS12025 PF00289 Biotin carboxylase, N-terminal domain HPY08_RS12035 PF01207 Dihydrouridine synthase (Dus) HPY08_RS12040 PF02954 Bacterial regulatory protein, Fis family HPY08_RS12045 PF00356 Bacterial regulatory proteins, lacI family HPY08_RS12045 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY08_RS12050 PF11647 Membrane Localization Domain HPY08_RS12060 PF00920 Dehydratase family HPY08_RS12065 PF01202 Shikimate kinase HPY08_RS12070 PF02447 GntP family permease HPY08_RS12075 PF01081 KDPG and KHG aldolase HPY08_RS12080 PF07715 TonB-dependent Receptor Plug Domain HPY08_RS12080 PF00593 TonB dependent receptor HPY08_RS12095 PF00672 HAMP domain HPY08_RS12095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS12095 PF17200 Single Cache domain 2 HPY08_RS12100 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY08_RS12100 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY08_RS12100 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY08_RS12105 PF13520 Amino acid permease HPY08_RS12110 PF18500 CadC C-terminal domain 1 HPY08_RS12110 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS12115 PF13411 MerR HTH family regulatory protein HPY08_RS12125 PF02142 MGS-like domain HPY08_RS12125 PF01808 AICARFT/IMPCHase bienzyme HPY08_RS12130 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain HPY08_RS12130 PF02844 Phosphoribosylglycinamide synthetase, N domain HPY08_RS12130 PF02843 Phosphoribosylglycinamide synthetase, C domain HPY08_RS12140 PF00216 Bacterial DNA-binding protein HPY08_RS12145 PF00571 CBS domain HPY08_RS12145 PF01595 Cyclin M transmembrane N-terminal domain HPY08_RS12155 PF04222 Protein of unknown function (DUF416) HPY08_RS12160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY08_RS12165 PF03167 Uracil DNA glycosylase superfamily HPY08_RS12170 PF00924 Mechanosensitive ion channel HPY08_RS12175 PF10996 Beta-Casp domain HPY08_RS12175 PF00753 Metallo-beta-lactamase superfamily HPY08_RS12175 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain HPY08_RS12185 PF00953 Glycosyl transferase family 4 HPY08_RS12190 PF00534 Glycosyl transferases group 1 HPY08_RS12190 PF13477 Glycosyl transferase 4-like HPY08_RS12195 PF13439 Glycosyltransferase Family 4 HPY08_RS12195 PF00534 Glycosyl transferases group 1 HPY08_RS12205 PF00535 Glycosyl transferase family 2 HPY08_RS12220 PF13614 AAA domain HPY08_RS12220 PF02706 Chain length determinant protein HPY08_RS12220 PF13807 G-rich domain on putative tyrosine kinase HPY08_RS12225 PF01451 Low molecular weight phosphotyrosine protein phosphatase HPY08_RS12230 PF10531 SLBB domain HPY08_RS12230 PF18412 Outer-membrane lipoprotein Wza C-terminal domain HPY08_RS12230 PF02563 Polysaccharide biosynthesis/export protein HPY08_RS12240 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF HPY08_RS12250 PF06082 Exopolysaccharide biosynthesis protein YbjH HPY08_RS12260 PF02397 Bacterial sugar transferase HPY08_RS12265 PF01370 NAD dependent epimerase/dehydratase family HPY08_RS12270 PF02719 Polysaccharide biosynthesis protein HPY08_RS12280 PF01040 UbiA prenyltransferase family HPY08_RS12285 PF04030 D-arabinono-1,4-lactone oxidase HPY08_RS12285 PF01565 FAD binding domain HPY08_RS12290 PF00106 short chain dehydrogenase HPY08_RS12300 PF01370 NAD dependent epimerase/dehydratase family HPY08_RS12305 PF01266 FAD dependent oxidoreductase HPY08_RS12330 PF00535 Glycosyl transferase family 2 HPY08_RS12340 PF01551 Peptidase family M23 HPY08_RS12345 PF00005 ABC transporter HPY08_RS12355 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase HPY08_RS12360 PF04321 RmlD substrate binding domain HPY08_RS12365 PF00483 Nucleotidyl transferase HPY08_RS12370 PF16363 GDP-mannose 4,6 dehydratase HPY08_RS12375 PF01370 NAD dependent epimerase/dehydratase family HPY08_RS12385 PF00535 Glycosyl transferase family 2 HPY08_RS12390 PF00457 Glycosyl hydrolases family 11 HPY08_RS12390 PF01522 Polysaccharide deacetylase HPY08_RS12395 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY08_RS12400 PF04488 Glycosyltransferase sugar-binding region containing DXD motif HPY08_RS12405 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) HPY08_RS12410 PF00583 Acetyltransferase (GNAT) family HPY08_RS12415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family HPY08_RS12435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY08_RS12440 PF00535 Glycosyl transferase family 2 HPY08_RS12445 PF01075 Glycosyltransferase family 9 (heptosyltransferase) HPY08_RS12450 PF01467 Cytidylyltransferase-like HPY08_RS12455 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain HPY08_RS12455 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain HPY08_RS12455 PF06827 Zinc finger found in FPG and IleRS HPY08_RS12465 PF00471 Ribosomal protein L33 HPY08_RS12470 PF00830 Ribosomal L28 family HPY08_RS12475 PF04002 RadC-like JAB domain HPY08_RS12480 PF00672 HAMP domain HPY08_RS12480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS12480 PF17200 Single Cache domain 2 HPY08_RS12485 PF02441 Flavoprotein HPY08_RS12485 PF04127 DNA / pantothenate metabolism flavoprotein HPY08_RS12495 PF00440 Bacterial regulatory proteins, tetR family HPY08_RS12500 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY08_RS12505 PF03279 Bacterial lipid A biosynthesis acyltransferase HPY08_RS12510 PF00156 Phosphoribosyl transferase domain HPY08_RS12515 PF03725 3' exoribonuclease family, domain 2 HPY08_RS12515 PF01138 3' exoribonuclease family, domain 1 HPY08_RS12520 PF08340 Domain of unknown function (DUF1732) HPY08_RS12520 PF03755 YicC-like family, N-terminal region HPY08_RS12525 PF03350 Uncharacterized protein family, UPF0114 HPY08_RS12530 PF00367 phosphotransferase system, EIIB HPY08_RS12530 PF02378 Phosphotransferase system, EIIC HPY08_RS12535 PF13580 SIS domain HPY08_RS12540 PF01380 SIS domain HPY08_RS12540 PF01418 Helix-turn-helix domain, rpiR family HPY08_RS12545 PF01032 FecCD transport family HPY08_RS12575 PF16124 RecQ zinc-binding HPY08_RS12575 PF00271 Helicase conserved C-terminal domain HPY08_RS12575 PF00570 HRDC domain HPY08_RS12575 PF09382 RQC domain HPY08_RS12575 PF00270 DEAD/DEAH box helicase HPY08_RS12580 PF00892 EamA-like transporter family HPY08_RS12590 PF12833 Helix-turn-helix domain HPY08_RS12595 PF01810 LysE type translocator HPY08_RS12600 PF00580 UvrD/REP helicase N-terminal domain HPY08_RS12600 PF13361 UvrD-like helicase C-terminal domain HPY08_RS12605 PF01432 Peptidase family M3 HPY08_RS12610 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ HPY08_RS12615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY08_RS12615 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS12625 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS12625 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY08_RS12635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY08_RS12640 PF00005 ABC transporter HPY08_RS12640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY08_RS12675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III HPY08_RS12680 PF13361 UvrD-like helicase C-terminal domain HPY08_RS12680 PF00580 UvrD/REP helicase N-terminal domain HPY08_RS12685 PF00440 Bacterial regulatory proteins, tetR family HPY08_RS12690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY08_RS12695 PF00873 AcrB/AcrD/AcrF family HPY08_RS12700 PF04380 Membrane fusogenic activity HPY08_RS12705 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain HPY08_RS12705 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain HPY08_RS12710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS12710 PF03466 LysR substrate binding domain HPY08_RS12780 PF12724 Flavodoxin domain HPY08_RS12785 PF02386 Cation transport protein HPY08_RS12790 PF01205 Uncharacterized protein family UPF0029 HPY08_RS12790 PF09186 Domain of unknown function (DUF1949) HPY08_RS12795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain HPY08_RS12795 PF00378 Enoyl-CoA hydratase/isomerase HPY08_RS12795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HPY08_RS12800 PF02803 Thiolase, C-terminal domain HPY08_RS12800 PF00108 Thiolase, N-terminal domain HPY08_RS12805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS12805 PF03466 LysR substrate binding domain HPY08_RS12810 PF07690 Major Facilitator Superfamily HPY08_RS12815 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS12815 PF12804 MobA-like NTP transferase domain HPY08_RS12820 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain HPY08_RS12820 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain HPY08_RS12825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY08_RS12825 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY08_RS12830 PF00231 ATP synthase HPY08_RS12835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain HPY08_RS12835 PF02874 ATP synthase alpha/beta family, beta-barrel domain HPY08_RS12835 PF00306 ATP synthase alpha/beta chain, C terminal domain HPY08_RS12840 PF00213 ATP synthase delta (OSCP) subunit HPY08_RS12845 PF00430 ATP synthase B/B' CF(0) HPY08_RS12850 PF00137 ATP synthase subunit C HPY08_RS12855 PF00119 ATP synthase A chain HPY08_RS12860 PF03899 ATP synthase I chain HPY08_RS12865 PF17762 HTH domain found in ParB protein HPY08_RS12865 PF02195 ParB-like nuclease domain HPY08_RS12870 PF13614 AAA domain HPY08_RS12875 PF02527 rRNA small subunit methyltransferase G HPY08_RS12880 PF01134 Glucose inhibited division protein A HPY08_RS12880 PF13932 GidA associated domain HPY08_RS12885 PF00258 Flavodoxin HPY08_RS12890 PF01926 50S ribosome-binding GTPase HPY08_RS12890 PF10396 GTP-binding protein TrmE N-terminus HPY08_RS12890 PF12631 MnmE helical domain HPY08_RS12895 PF02096 60Kd inner membrane protein HPY08_RS12895 PF14849 YidC periplasmic domain HPY08_RS12900 PF01809 Putative membrane protein insertion efficiency factor HPY08_RS12905 PF00825 Ribonuclease P HPY08_RS12910 PF00468 Ribosomal protein L34 HPY08_RS12915 PF00005 ABC transporter HPY08_RS12920 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS12925 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY08_RS12930 PF02195 ParB-like nuclease domain HPY08_RS12930 PF08775 ParB family HPY08_RS12935 PF18607 ParA helix turn helix domain HPY08_RS12935 PF13614 AAA domain HPY08_RS12960 PF01709 Transcriptional regulator HPY08_RS12965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY08_RS12965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase HPY08_RS12970 PF00672 HAMP domain HPY08_RS12970 PF17200 Single Cache domain 2 HPY08_RS12970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS12975 PF10928 Protein of unknown function (DUF2810) HPY08_RS12980 PF17874 MalT-like TPR region HPY08_RS12980 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS12985 PF00343 Carbohydrate phosphorylase HPY08_RS12990 PF02446 4-alpha-glucanotransferase HPY08_RS12995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY08_RS12995 PF02806 Alpha amylase, C-terminal all-beta domain HPY08_RS12995 PF00128 Alpha amylase, catalytic domain HPY08_RS13000 PF05638 Type VI secretion system effector, Hcp HPY08_RS13005 PF04717 Type VI secretion system, phage-baseplate injector HPY08_RS13005 PF16671 Actin cross-linking domain HPY08_RS13015 PF01476 LysM domain HPY08_RS13030 PF01168 Alanine racemase, N-terminal domain HPY08_RS13030 PF01757 Acyltransferase family HPY08_RS13030 PF00842 Alanine racemase, C-terminal domain HPY08_RS13040 PF00939 Sodium:sulfate symporter transmembrane region HPY08_RS13045 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) HPY08_RS13050 PF08329 Chitinase A, N-terminal domain HPY08_RS13050 PF00704 Glycosyl hydrolases family 18 HPY08_RS13075 PF01569 PAP2 superfamily HPY08_RS13080 PF04389 Peptidase family M28 HPY08_RS13080 PF02225 PA domain HPY08_RS13085 PF00375 Sodium:dicarboxylate symporter family HPY08_RS13095 PF02630 SCO1/SenC HPY08_RS13110 PF03616 Sodium/glutamate symporter HPY08_RS13115 PF12945 Flagellar protein YcgR HPY08_RS13115 PF07238 PilZ domain HPY08_RS13130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion HPY08_RS13130 PF00529 HlyD membrane-fusion protein of T1SS HPY08_RS13135 PF11742 Protein of unknown function (DUF3302) HPY08_RS13140 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS13155 PF01048 Phosphorylase superfamily HPY08_RS13160 PF08349 Protein of unknown function (DUF1722) HPY08_RS13165 PF13411 MerR HTH family regulatory protein HPY08_RS13170 PF03441 FAD binding domain of DNA photolyase HPY08_RS13170 PF00875 DNA photolyase HPY08_RS13175 PF03734 L,D-transpeptidase catalytic domain HPY08_RS13175 PF01476 LysM domain HPY08_RS13175 PF17969 L,D-transpeptidase C-terminal domain HPY08_RS13185 PF00271 Helicase conserved C-terminal domain HPY08_RS13185 PF00270 DEAD/DEAH box helicase HPY08_RS13190 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain HPY08_RS13190 PF00326 Prolyl oligopeptidase family HPY08_RS13195 PF07715 TonB-dependent Receptor Plug Domain HPY08_RS13195 PF00593 TonB dependent receptor HPY08_RS13215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS13215 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS13215 PF00672 HAMP domain HPY08_RS13220 PF12849 PBP superfamily domain HPY08_RS13225 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS13230 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS13235 PF00005 ABC transporter HPY08_RS13240 PF00072 Response regulator receiver domain HPY08_RS13240 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS13255 PF01740 STAS domain HPY08_RS13255 PF00916 Sulfate permease family HPY08_RS13265 PF01551 Peptidase family M23 HPY08_RS13265 PF08525 Opacity-associated protein A N-terminal motif HPY08_RS13265 PF01476 LysM domain HPY08_RS13270 PF13188 PAS domain HPY08_RS13270 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS13270 PF00563 EAL domain HPY08_RS13270 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS13275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS13275 PF03466 LysR substrate binding domain HPY08_RS13280 PF07690 Major Facilitator Superfamily HPY08_RS13285 PF09278 MerR, DNA binding HPY08_RS13285 PF00376 MerR family regulatory protein HPY08_RS13300 PF00375 Sodium:dicarboxylate symporter family HPY08_RS13310 PF02001 Protein of unknown function DUF134 HPY08_RS13335 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY08_RS13335 PF01447 Thermolysin metallopeptidase, catalytic domain HPY08_RS13335 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY08_RS13335 PF01483 Proprotein convertase P-domain HPY08_RS13345 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family HPY08_RS13345 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain HPY08_RS13350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY08_RS13350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain HPY08_RS13355 PF00581 Rhodanese-like domain HPY08_RS13360 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS13360 PF00563 EAL domain HPY08_RS13365 PF13419 Haloacid dehalogenase-like hydrolase HPY08_RS13370 PF00916 Sulfate permease family HPY08_RS13370 PF01740 STAS domain HPY08_RS13375 PF00849 RNA pseudouridylate synthase HPY08_RS13435 PF07724 AAA domain (Cdc48 subfamily) HPY08_RS13435 PF10431 C-terminal, D2-small domain, of ClpB protein HPY08_RS13435 PF00004 ATPase family associated with various cellular activities (AAA) HPY08_RS13435 PF17871 AAA lid domain HPY08_RS13465 PF04717 Type VI secretion system, phage-baseplate injector HPY08_RS13465 PF16671 Actin cross-linking domain HPY08_RS13485 PF05025 RbsD / FucU transport protein family HPY08_RS13490 PF00005 ABC transporter HPY08_RS13495 PF02653 Branched-chain amino acid transport system / permease component HPY08_RS13500 PF13407 Periplasmic binding protein domain HPY08_RS13505 PF00294 pfkB family carbohydrate kinase HPY08_RS13510 PF00356 Bacterial regulatory proteins, lacI family HPY08_RS13515 PF04973 Nicotinamide mononucleotide transporter HPY08_RS13520 PF01048 Phosphorylase superfamily HPY08_RS13530 PF03009 Glycerophosphoryl diester phosphodiesterase family HPY08_RS13535 PF07690 Major Facilitator Superfamily HPY08_RS13550 PF02743 Cache domain HPY08_RS13550 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS13550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS13555 PF00072 Response regulator receiver domain HPY08_RS13555 PF02954 Bacterial regulatory protein, Fis family HPY08_RS13555 PF00158 Sigma-54 interaction domain HPY08_RS13570 PF01266 FAD dependent oxidoreductase HPY08_RS13575 PF00041 Fibronectin type III domain HPY08_RS13575 PF12561 ToxR activated gene A lipoprotein domain HPY08_RS13580 PF01327 Polypeptide deformylase HPY08_RS13585 PF03611 PTS system sugar-specific permease component HPY08_RS13595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY08_RS13600 PF00356 Bacterial regulatory proteins, lacI family HPY08_RS13605 PF00175 Oxidoreductase NAD-binding domain HPY08_RS13605 PF00042 Globin HPY08_RS13605 PF00970 Oxidoreductase FAD-binding domain HPY08_RS13610 PF03334 Na+/H+ antiporter subunit HPY08_RS13615 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) HPY08_RS13635 PF00361 Proton-conducting membrane transporter HPY08_RS13635 PF13244 Domain of unknown function (DUF4040) HPY08_RS13635 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus HPY08_RS13635 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter HPY08_RS13645 PF00582 Universal stress protein family HPY08_RS13650 PF03222 Tryptophan/tyrosine permease family HPY08_RS13655 PF01212 Beta-eliminating lyase HPY08_RS13665 PF12843 Putative quorum-sensing-regulated virulence factor HPY08_RS13675 PF08448 PAS fold HPY08_RS13675 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS13675 PF00563 EAL domain HPY08_RS13680 PF00313 'Cold-shock' DNA-binding domain HPY08_RS13695 PF07584 Aerotolerance regulator N-terminal HPY08_RS13695 PF13519 von Willebrand factor type A domain HPY08_RS13710 PF01882 Protein of unknown function DUF58 HPY08_RS13715 PF07726 ATPase family associated with various cellular activities (AAA) HPY08_RS13715 PF17863 AAA lid domain HPY08_RS13720 PF00672 HAMP domain HPY08_RS13720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS13720 PF02743 Cache domain HPY08_RS13735 PF07670 Nucleoside recognition HPY08_RS13735 PF07662 Na+ dependent nucleoside transporter C-terminus HPY08_RS13735 PF01773 Na+ dependent nucleoside transporter N-terminus HPY08_RS13740 PF01546 Peptidase family M20/M25/M40 HPY08_RS13740 PF07687 Peptidase dimerisation domain HPY08_RS13750 PF01590 GAF domain HPY08_RS13750 PF00158 Sigma-54 interaction domain HPY08_RS13755 PF00970 Oxidoreductase FAD-binding domain HPY08_RS13755 PF00175 Oxidoreductase NAD-binding domain HPY08_RS13755 PF00042 Globin HPY08_RS13760 PF00313 'Cold-shock' DNA-binding domain HPY08_RS13765 PF03889 Alternative ribosome-rescue factor A HPY08_RS13780 PF00072 Response regulator receiver domain HPY08_RS13790 PF03853 YjeF-related protein N-terminus HPY08_RS13790 PF01256 Carbohydrate kinase HPY08_RS13795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY08_RS13795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY08_RS13805 PF07885 Ion channel HPY08_RS13815 PF00478 IMP dehydrogenase / GMP reductase domain HPY08_RS13820 PF00145 C-5 cytosine-specific DNA methylase HPY08_RS13830 PF00986 DNA gyrase B subunit, carboxyl terminus HPY08_RS13830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS13830 PF00204 DNA gyrase B HPY08_RS13830 PF01751 Toprim domain HPY08_RS13835 PF09520 Type II restriction endonuclease, TdeIII HPY08_RS13845 PF00271 Helicase conserved C-terminal domain HPY08_RS13845 PF00270 DEAD/DEAH box helicase HPY08_RS13850 PF03605 Anaerobic c4-dicarboxylate membrane transporter HPY08_RS13855 PF02540 NAD synthase HPY08_RS13860 PF01467 Cytidylyltransferase-like HPY08_RS13865 PF11849 Domain of unknown function (DUF3369) HPY08_RS13875 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY08_RS13875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS13875 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS13885 PF03553 Na+/H+ antiporter family HPY08_RS13890 PF07690 Major Facilitator Superfamily HPY08_RS13900 PF00657 GDSL-like Lipase/Acylhydrolase HPY08_RS13905 PF07968 Leukocidin/Hemolysin toxin family HPY08_RS13905 PF16458 Beta-prism lectin HPY08_RS13905 PF12563 Hemolytic toxin N terminal HPY08_RS13910 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS13910 PF00672 HAMP domain HPY08_RS13910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS13915 PF00561 alpha/beta hydrolase fold HPY08_RS13920 PF03280 Proteobacterial lipase chaperone protein HPY08_RS13925 PF05547 Immune inhibitor A peptidase M6 HPY08_RS13925 PF00801 PKD domain HPY08_RS13945 PF01032 FecCD transport family HPY08_RS13950 PF01032 FecCD transport family HPY08_RS13955 PF00005 ABC transporter HPY08_RS13960 PF12833 Helix-turn-helix domain HPY08_RS13965 PF00593 TonB dependent receptor HPY08_RS13965 PF07715 TonB-dependent Receptor Plug Domain HPY08_RS13975 PF00871 Acetokinase family HPY08_RS13990 PF08463 EcoEI R protein C-terminal HPY08_RS13990 PF00271 Helicase conserved C-terminal domain HPY08_RS13990 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) HPY08_RS13990 PF04851 Type III restriction enzyme, res subunit HPY08_RS13995 PF02384 N-6 DNA Methylase HPY08_RS14000 PF01420 Type I restriction modification DNA specificity domain HPY08_RS14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS14035 PF03466 LysR substrate binding domain HPY08_RS14045 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS14045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS14045 PF00672 HAMP domain HPY08_RS14050 PF00072 Response regulator receiver domain HPY08_RS14050 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS14060 PF04545 Sigma-70, region 4 HPY08_RS14060 PF04542 Sigma-70 region 2 HPY08_RS14080 PF01261 Xylose isomerase-like TIM barrel HPY08_RS14085 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family HPY08_RS14095 PF00596 Class II Aldolase and Adducin N-terminal domain HPY08_RS14100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY08_RS14105 PF03611 PTS system sugar-specific permease component HPY08_RS14110 PF08220 DeoR-like helix-turn-helix domain HPY08_RS14110 PF00455 DeoR C terminal sensor domain HPY08_RS14125 PF06736 Protein of unknown function (DUF1211) HPY08_RS14135 PF00857 Isochorismatase family HPY08_RS14140 PF02678 Pirin HPY08_RS14140 PF17954 Quercetinase C-terminal cupin domain HPY08_RS14145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS14145 PF03466 LysR substrate binding domain HPY08_RS14150 PF00128 Alpha amylase, catalytic domain HPY08_RS14155 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS14170 PF00072 Response regulator receiver domain HPY08_RS14170 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS14175 PF14827 Double sensory domain of two-component sensor kinase HPY08_RS14175 PF00672 HAMP domain HPY08_RS14175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS14175 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS14175 PF13426 PAS domain HPY08_RS14215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS14215 PF03466 LysR substrate binding domain HPY08_RS14220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS14220 PF00672 HAMP domain HPY08_RS14220 PF02743 Cache domain HPY08_RS14225 PF00282 Pyridoxal-dependent decarboxylase conserved domain HPY08_RS14230 PF07943 Penicillin-binding protein 5, C-terminal domain HPY08_RS14230 PF00768 D-alanyl-D-alanine carboxypeptidase HPY08_RS14245 PF00194 Eukaryotic-type carbonic anhydrase HPY08_RS14250 PF02347 Glycine cleavage system P-protein HPY08_RS14255 PF01597 Glycine cleavage H-protein HPY08_RS14260 PF00464 Serine hydroxymethyltransferase HPY08_RS14270 PF08669 Glycine cleavage T-protein C-terminal barrel domain HPY08_RS14270 PF01571 Aminomethyltransferase folate-binding domain HPY08_RS14275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain HPY08_RS14275 PF02824 TGS domain HPY08_RS14275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) HPY08_RS14275 PF03129 Anticodon binding domain HPY08_RS14280 PF00707 Translation initiation factor IF-3, C-terminal domain HPY08_RS14280 PF05198 Translation initiation factor IF-3, N-terminal domain HPY08_RS14285 PF01632 Ribosomal protein L35 HPY08_RS14290 PF00453 Ribosomal protein L20 HPY08_RS14295 PF00589 Phage integrase family HPY08_RS14295 PF13495 Phage integrase, N-terminal SAM-like domain HPY08_RS14335 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HPY08_RS14375 PF14602 Hexapeptide repeat of succinyl-transferase HPY08_RS14375 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS14375 PF12804 MobA-like NTP transferase domain HPY08_RS14445 PF00583 Acetyltransferase (GNAT) family HPY08_RS14450 PF02498 BRO family, N-terminal domain HPY08_RS14450 PF10548 P22AR C-terminal domain HPY08_RS14460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY08_RS14515 PF13673 Acetyltransferase (GNAT) domain HPY08_RS14555 PF00293 NUDIX domain HPY08_RS14600 PF00583 Acetyltransferase (GNAT) family HPY08_RS14620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY08_RS14645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY08_RS14670 PF00583 Acetyltransferase (GNAT) family HPY08_RS14735 PF17676 LD-carboxypeptidase C-terminal domain HPY08_RS14735 PF02016 LD-carboxypeptidase N-terminal domain HPY08_RS14785 PF13673 Acetyltransferase (GNAT) domain HPY08_RS14815 PF04229 GrpB protein HPY08_RS14845 PF13302 Acetyltransferase (GNAT) domain HPY08_RS14895 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS14940 PF04229 GrpB protein HPY08_RS14960 PF01966 HD domain HPY08_RS15020 PF13673 Acetyltransferase (GNAT) domain HPY08_RS15140 PF13419 Haloacid dehalogenase-like hydrolase HPY08_RS15145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY08_RS15220 PF02567 Phenazine biosynthesis-like protein HPY08_RS15260 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system HPY08_RS15265 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system HPY08_RS15355 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HPY08_RS15420 PF13302 Acetyltransferase (GNAT) domain HPY08_RS15485 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS15485 PF14602 Hexapeptide repeat of succinyl-transferase HPY08_RS15485 PF12804 MobA-like NTP transferase domain HPY08_RS15505 PF01636 Phosphotransferase enzyme family HPY08_RS15510 PF13302 Acetyltransferase (GNAT) domain HPY08_RS15550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY08_RS15565 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ HPY08_RS15595 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS15630 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH HPY08_RS15645 PF02567 Phenazine biosynthesis-like protein HPY08_RS15695 PF00293 NUDIX domain HPY08_RS15740 PF05016 ParE toxin of type II toxin-antitoxin system, parDE HPY08_RS15760 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY08_RS15790 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB HPY08_RS15795 PF01381 Helix-turn-helix HPY08_RS15825 PF09722 Protein of unknown function (DUF2384) HPY08_RS15840 PF01797 Transposase IS200 like HPY08_RS15845 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase HPY08_RS15845 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase HPY08_RS15850 PF00691 OmpA family HPY08_RS15850 PF13488 Glycine zipper HPY08_RS15855 PF00672 HAMP domain HPY08_RS15855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS15855 PF17200 Single Cache domain 2 HPY08_RS15860 PF16901 C-terminal domain of alpha-glycerophosphate oxidase HPY08_RS15860 PF01266 FAD dependent oxidoreductase HPY08_RS15865 PF00294 pfkB family carbohydrate kinase HPY08_RS15870 PF00251 Glycosyl hydrolases family 32 N-terminal domain HPY08_RS15870 PF08244 Glycosyl hydrolases family 32 C terminal HPY08_RS15880 PF02378 Phosphotransferase system, EIIC HPY08_RS15880 PF00367 phosphotransferase system, EIIB HPY08_RS15925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HPY08_RS15925 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS15940 PF04143 Sulphur transport HPY08_RS15955 PF00873 AcrB/AcrD/AcrF family HPY08_RS15960 PF00881 Nitroreductase family HPY08_RS15965 PF03992 Antibiotic biosynthesis monooxygenase HPY08_RS15970 PF03466 LysR substrate binding domain HPY08_RS15970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS15980 PF06942 GlpM protein HPY08_RS15995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HPY08_RS15995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain HPY08_RS16020 PF00456 Transketolase, thiamine diphosphate binding domain HPY08_RS16020 PF02779 Transketolase, pyrimidine binding domain HPY08_RS16020 PF02780 Transketolase, C-terminal domain HPY08_RS16025 PF00923 Transaldolase/Fructose-6-phosphate aldolase HPY08_RS16030 PF04198 Putative sugar-binding domain HPY08_RS16035 PF00581 Rhodanese-like domain HPY08_RS16045 PF00899 ThiF family HPY08_RS16050 PF03453 MoeA N-terminal region (domain I and II) HPY08_RS16050 PF00994 Probable molybdopterin binding domain HPY08_RS16050 PF03454 MoeA C-terminal region (domain IV) HPY08_RS16055 PF01227 GTP cyclohydrolase I HPY08_RS16060 PF01625 Peptide methionine sulfoxide reductase HPY08_RS16060 PF01641 SelR domain HPY08_RS16065 PF01268 Formate--tetrahydrofolate ligase HPY08_RS16070 PF01741 Large-conductance mechanosensitive channel, MscL HPY08_RS16085 PF13419 Haloacid dehalogenase-like hydrolase HPY08_RS16090 PF01272 Transcription elongation factor, GreA/GreB, C-term HPY08_RS16090 PF14760 Rnk N-terminus HPY08_RS16095 PF13419 Haloacid dehalogenase-like hydrolase HPY08_RS16115 PF00005 ABC transporter HPY08_RS16120 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS16125 PF07702 UTRA domain HPY08_RS16125 PF00392 Bacterial regulatory proteins, gntR family HPY08_RS16135 PF00854 POT family HPY08_RS16160 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY08_RS16165 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS16170 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS16170 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY08_RS16175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY08_RS16175 PF00005 ABC transporter HPY08_RS16180 PF03479 Plants and Prokaryotes Conserved (PCC) domain HPY08_RS16180 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS16180 PF12804 MobA-like NTP transferase domain HPY08_RS16195 PF02798 Glutathione S-transferase, N-terminal domain HPY08_RS16195 PF00043 Glutathione S-transferase, C-terminal domain HPY08_RS16215 PF03061 Thioesterase superfamily HPY08_RS16225 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle HPY08_RS16225 PF12793 Sugar transport-related sRNA regulator N-term HPY08_RS16230 PF07715 TonB-dependent Receptor Plug Domain HPY08_RS16230 PF04886 PT repeat HPY08_RS16230 PF00593 TonB dependent receptor HPY08_RS16235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS16235 PF03466 LysR substrate binding domain HPY08_RS16240 PF13380 CoA binding domain HPY08_RS16240 PF13607 Succinyl-CoA ligase like flavodoxin domain HPY08_RS16240 PF00583 Acetyltransferase (GNAT) family HPY08_RS16250 PF01820 D-ala D-ala ligase N-terminus HPY08_RS16250 PF07478 D-ala D-ala ligase C-terminus HPY08_RS16260 PF01253 Translation initiation factor SUI1 HPY08_RS16265 PF05638 Type VI secretion system effector, Hcp HPY08_RS16270 PF16671 Actin cross-linking domain HPY08_RS16270 PF04717 Type VI secretion system, phage-baseplate injector HPY08_RS16295 PF00579 tRNA synthetases class I (W and Y) HPY08_RS16305 PF00717 Peptidase S24-like HPY08_RS16310 PF00817 impB/mucB/samB family HPY08_RS16310 PF11799 impB/mucB/samB family C-terminal domain HPY08_RS16310 PF13438 Domain of unknown function (DUF4113) HPY08_RS16310 PF11798 IMS family HHH motif HPY08_RS16370 PF10609 NUBPL iron-transfer P-loop NTPase HPY08_RS16375 PF13087 AAA domain HPY08_RS16375 PF13091 PLD-like domain HPY08_RS16390 PF04851 Type III restriction enzyme, res subunit HPY08_RS16415 PF03701 Uncharacterised protein family (UPF0181) HPY08_RS16430 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS16430 PF00072 Response regulator receiver domain HPY08_RS16440 PF02233 NAD(P) transhydrogenase beta subunit HPY08_RS16445 PF05222 Alanine dehydrogenase/PNT, N-terminal domain HPY08_RS16445 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch HPY08_RS16445 PF01262 Alanine dehydrogenase/PNT, C-terminal domain HPY08_RS16460 PF17158 Membrane-associated sensor, integral membrane domain HPY08_RS16460 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS16480 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS16480 PF17151 Periplasmic sensor domain HPY08_RS16510 PF03831 PhnA domain HPY08_RS16510 PF08274 PhnA Zinc-Ribbon HPY08_RS16515 PF01797 Transposase IS200 like HPY08_RS16525 PF03741 Integral membrane protein TerC family HPY08_RS16530 PF00149 Calcineurin-like phosphoesterase HPY08_RS16530 PF02872 5'-nucleotidase, C-terminal domain HPY08_RS16535 PF11398 Protein of unknown function (DUF2813) HPY08_RS16540 PF06496 Protein of unknown function (DUF1097) HPY08_RS16545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS16545 PF03466 LysR substrate binding domain HPY08_RS16550 PF01226 Formate/nitrite transporter HPY08_RS16555 PF04264 YceI-like domain HPY08_RS16560 PF01292 Prokaryotic cytochrome b561 HPY08_RS16570 PF00563 EAL domain HPY08_RS16570 PF10388 EAL-domain associated signalling protein domain HPY08_RS16585 PF02416 mttA/Hcf106 family HPY08_RS16590 PF00072 Response regulator receiver domain HPY08_RS16590 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS16595 PF02702 Osmosensitive K+ channel His kinase sensor domain HPY08_RS16595 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS16595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS16595 PF13493 Domain of unknown function (DUF4118) HPY08_RS16600 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II HPY08_RS16600 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg HPY08_RS16600 PF10371 Domain of unknown function HPY08_RS16600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain HPY08_RS16600 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase HPY08_RS16605 PF02705 K+ potassium transporter HPY08_RS16610 PF01926 50S ribosome-binding GTPase HPY08_RS16615 PF07683 Cobalamin synthesis protein cobW C-terminal domain HPY08_RS16615 PF02492 CobW/HypB/UreG, nucleotide-binding domain HPY08_RS16620 PF00654 Voltage gated chloride channel HPY08_RS16630 PF00155 Aminotransferase class I and II HPY08_RS16635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS16635 PF00072 Response regulator receiver domain HPY08_RS16640 PF13476 AAA domain HPY08_RS16645 PF00149 Calcineurin-like phosphoesterase HPY08_RS16645 PF12320 Type 5 capsule protein repressor C-terminal domain HPY08_RS16650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY08_RS16650 PF00356 Bacterial regulatory proteins, lacI family HPY08_RS16655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY08_RS16655 PF00381 PTS HPr component phosphorylation site HPY08_RS16660 PF00294 pfkB family carbohydrate kinase HPY08_RS16665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY08_RS16665 PF02378 Phosphotransferase system, EIIC HPY08_RS16670 PF18030 RimK PreATP-grasp domain HPY08_RS16670 PF08443 RimK-like ATP-grasp domain HPY08_RS16675 PF00155 Aminotransferase class I and II HPY08_RS16685 PF03477 ATP cone domain HPY08_RS16685 PF13597 Anaerobic ribonucleoside-triphosphate reductase HPY08_RS16695 PF13419 Haloacid dehalogenase-like hydrolase HPY08_RS16700 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS16700 PF00672 HAMP domain HPY08_RS16700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS16705 PF03606 C4-dicarboxylate anaerobic carrier HPY08_RS16710 PF03313 Serine dehydratase alpha chain HPY08_RS16710 PF03315 Serine dehydratase beta chain HPY08_RS16715 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS16715 PF00072 Response regulator receiver domain HPY08_RS16720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS16720 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term HPY08_RS16720 PF07730 Histidine kinase HPY08_RS16720 PF00672 HAMP domain HPY08_RS16725 PF12838 4Fe-4S dicluster domain HPY08_RS16725 PF13187 4Fe-4S dicluster domain HPY08_RS16735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain HPY08_RS16735 PF00384 Molybdopterin oxidoreductase HPY08_RS16735 PF01568 Molydopterin dinucleotide binding domain HPY08_RS16740 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) HPY08_RS16745 PF03264 NapC/NirT cytochrome c family, N-terminal region HPY08_RS16755 PF01966 HD domain HPY08_RS16760 PF00072 Response regulator receiver domain HPY08_RS16760 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS16765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS16765 PF05231 MASE1 HPY08_RS16765 PF07730 Histidine kinase HPY08_RS16770 PF07690 Major Facilitator Superfamily HPY08_RS16780 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS16785 PF08402 TOBE domain HPY08_RS16785 PF00005 ABC transporter HPY08_RS16790 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus HPY08_RS16800 PF00108 Thiolase, N-terminal domain HPY08_RS16800 PF02803 Thiolase, C-terminal domain HPY08_RS16805 PF00106 short chain dehydrogenase HPY08_RS16810 PF02355 Protein export membrane protein HPY08_RS16810 PF07549 SecD/SecF GG Motif HPY08_RS16815 PF07549 SecD/SecF GG Motif HPY08_RS16815 PF13721 SecD export protein N-terminal TM region HPY08_RS16815 PF02355 Protein export membrane protein HPY08_RS16830 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS16830 PF17158 Membrane-associated sensor, integral membrane domain HPY08_RS16835 PF00483 Nucleotidyl transferase HPY08_RS16840 PF06483 Chitinase C HPY08_RS16840 PF00704 Glycosyl hydrolases family 18 HPY08_RS16845 PF00465 Iron-containing alcohol dehydrogenase HPY08_RS16855 PF14532 Sigma-54 interaction domain HPY08_RS16855 PF00072 Response regulator receiver domain HPY08_RS16855 PF02954 Bacterial regulatory protein, Fis family HPY08_RS16860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS16860 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS16860 PF02743 Cache domain HPY08_RS16870 PF07690 Major Facilitator Superfamily HPY08_RS16875 PF02887 Pyruvate kinase, alpha/beta domain HPY08_RS16875 PF00224 Pyruvate kinase, barrel domain HPY08_RS16880 PF01627 Hpt domain HPY08_RS16880 PF00072 Response regulator receiver domain HPY08_RS16880 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS16880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS16880 PF00672 HAMP domain HPY08_RS16885 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family HPY08_RS16890 PF02142 MGS-like domain HPY08_RS16895 PF00857 Isochorismatase family HPY08_RS16900 PF01219 Prokaryotic diacylglycerol kinase HPY08_RS16905 PF00580 UvrD/REP helicase N-terminal domain HPY08_RS16905 PF12462 DNA helicase IV / RNA helicase N terminal HPY08_RS16905 PF13361 UvrD-like helicase C-terminal domain HPY08_RS16910 PF12805 FUSC-like inner membrane protein yccS HPY08_RS16915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS16915 PF08448 PAS fold HPY08_RS16915 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS16915 PF00072 Response regulator receiver domain HPY08_RS16915 PF13188 PAS domain HPY08_RS16940 PF03459 TOBE domain HPY08_RS16940 PF00005 ABC transporter HPY08_RS16945 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS16955 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain HPY08_RS16955 PF07685 CobB/CobQ-like glutamine amidotransferase domain HPY08_RS16995 PF12833 Helix-turn-helix domain HPY08_RS16995 PF02311 AraC-like ligand binding domain HPY08_RS17000 PF07715 TonB-dependent Receptor Plug Domain HPY08_RS17000 PF00593 TonB dependent receptor HPY08_RS17005 PF07690 Major Facilitator Superfamily HPY08_RS17010 PF00501 AMP-binding enzyme HPY08_RS17010 PF00668 Condensation domain HPY08_RS17010 PF08242 Methyltransferase domain HPY08_RS17010 PF00550 Phosphopantetheine attachment site HPY08_RS17015 PF00550 Phosphopantetheine attachment site HPY08_RS17015 PF00668 Condensation domain HPY08_RS17015 PF13193 AMP-binding enzyme C-terminal domain HPY08_RS17015 PF00501 AMP-binding enzyme HPY08_RS17030 PF00425 chorismate binding enzyme HPY08_RS17035 PF13193 AMP-binding enzyme C-terminal domain HPY08_RS17035 PF00501 AMP-binding enzyme HPY08_RS17040 PF02028 BCCT, betaine/carnitine/choline family transporter HPY08_RS17045 PF13977 BetI-type transcriptional repressor, C-terminal HPY08_RS17045 PF00440 Bacterial regulatory proteins, tetR family HPY08_RS17050 PF00171 Aldehyde dehydrogenase family HPY08_RS17055 PF05199 GMC oxidoreductase HPY08_RS17055 PF00732 GMC oxidoreductase HPY08_RS17060 PF00005 ABC transporter HPY08_RS17060 PF00664 ABC transporter transmembrane region HPY08_RS17065 PF00005 ABC transporter HPY08_RS17065 PF00664 ABC transporter transmembrane region HPY08_RS17075 PF00072 Response regulator receiver domain HPY08_RS17075 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS17075 PF09308 LuxQ, periplasmic HPY08_RS17080 PF13407 Periplasmic binding protein domain HPY08_RS17090 PF01541 GIY-YIG catalytic domain HPY08_RS17095 PF04337 Protein of unknown function, DUF480 HPY08_RS17105 PF04363 Protein of unknown function (DUF496) HPY08_RS17115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain HPY08_RS17115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain HPY08_RS17120 PF00230 Major intrinsic protein HPY08_RS17125 PF04324 BFD-like [2Fe-2S] binding domain HPY08_RS17125 PF01266 FAD dependent oxidoreductase HPY08_RS17130 PF00890 FAD binding domain HPY08_RS17135 PF02754 Cysteine-rich domain HPY08_RS17135 PF13183 4Fe-4S dicluster domain HPY08_RS17140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III HPY08_RS17140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HPY08_RS17145 PF00085 Thioredoxin HPY08_RS17150 PF07690 Major Facilitator Superfamily HPY08_RS17170 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS17175 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS17180 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY08_RS17185 PF00005 ABC transporter HPY08_RS17195 PF05762 VWA domain containing CoxE-like protein HPY08_RS17200 PF17868 AAA lid domain HPY08_RS17200 PF12592 Protein of unknown function (DUF3763) HPY08_RS17200 PF07728 AAA domain (dynein-related subfamily) HPY08_RS17205 PF00293 NUDIX domain HPY08_RS17210 PF01212 Beta-eliminating lyase HPY08_RS17215 PF00034 Cytochrome c HPY08_RS17220 PF08361 MAATS-type transcriptional repressor, C-terminal region HPY08_RS17220 PF00440 Bacterial regulatory proteins, tetR family HPY08_RS17225 PF00271 Helicase conserved C-terminal domain HPY08_RS17225 PF00270 DEAD/DEAH box helicase HPY08_RS17235 PF03222 Tryptophan/tyrosine permease family HPY08_RS17240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS17240 PF00672 HAMP domain HPY08_RS17240 PF02743 Cache domain HPY08_RS17245 PF16363 GDP-mannose 4,6 dehydratase HPY08_RS17250 PF03746 LamB/YcsF family HPY08_RS17255 PF02682 Carboxyltransferase domain, subdomain C and D HPY08_RS17260 PF02626 Carboxyltransferase domain, subdomain A and B HPY08_RS17270 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain HPY08_RS17270 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain HPY08_RS17280 PF00005 ABC transporter HPY08_RS17285 PF13472 GDSL-like Lipase/Acylhydrolase family HPY08_RS17290 PF12241 Trans-2-enoyl-CoA reductase catalytic region HPY08_RS17290 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase HPY08_RS17290 PF07055 Enoyl reductase FAD binding domain HPY08_RS17295 PF00498 FHA domain HPY08_RS17295 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS17295 PF00563 EAL domain HPY08_RS17305 PF00226 DnaJ domain HPY08_RS17305 PF01556 DnaJ C terminal domain HPY08_RS17305 PF00684 DnaJ central domain HPY08_RS17320 PF13419 Haloacid dehalogenase-like hydrolase HPY08_RS17335 PF00294 pfkB family carbohydrate kinase HPY08_RS17340 PF00884 Sulfatase HPY08_RS17350 PF03880 DbpA RNA binding domain HPY08_RS17350 PF00271 Helicase conserved C-terminal domain HPY08_RS17350 PF00270 DEAD/DEAH box helicase HPY08_RS17355 PF00575 S1 RNA binding domain HPY08_RS17355 PF00773 RNB domain HPY08_RS17355 PF08206 Ribonuclease B OB domain HPY08_RS17365 PF12849 PBP superfamily domain HPY08_RS17370 PF01575 MaoC like domain HPY08_RS17375 PF04244 Deoxyribodipyrimidine photo-lyase-related protein HPY08_RS17380 PF18416 N-acetylglucosamine binding protein domain 2 HPY08_RS17380 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading HPY08_RS17385 PF01447 Thermolysin metallopeptidase, catalytic domain HPY08_RS17385 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY08_RS17385 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY08_RS17385 PF03413 Peptidase propeptide and YPEB domain HPY08_RS17385 PF04151 Bacterial pre-peptidase C-terminal domain HPY08_RS17390 PF04389 Peptidase family M28 HPY08_RS17390 PF04151 Bacterial pre-peptidase C-terminal domain HPY08_RS17395 PF00491 Arginase family HPY08_RS17400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain HPY08_RS17400 PF17944 Arginine decarboxylase C-terminal helical extension HPY08_RS17400 PF17810 Arginine decarboxylase helical bundle domain HPY08_RS17410 PF03448 MgtE intracellular N domain HPY08_RS17410 PF01769 Divalent cation transporter HPY08_RS17410 PF00571 CBS domain HPY08_RS17420 PF00696 Amino acid kinase family HPY08_RS17420 PF13840 ACT domain HPY08_RS17425 PF06339 Ectoine synthase HPY08_RS17430 PF00202 Aminotransferase class-III HPY08_RS17435 PF00583 Acetyltransferase (GNAT) family HPY08_RS17440 PF01329 Pterin 4 alpha carbinolamine dehydratase HPY08_RS17445 PF00351 Biopterin-dependent aromatic amino acid hydroxylase HPY08_RS17450 PF00501 AMP-binding enzyme HPY08_RS17450 PF13193 AMP-binding enzyme C-terminal domain HPY08_RS17470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS17470 PF03466 LysR substrate binding domain HPY08_RS17480 PF00892 EamA-like transporter family HPY08_RS17485 PF14602 Hexapeptide repeat of succinyl-transferase HPY08_RS17485 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal HPY08_RS17485 PF00132 Bacterial transferase hexapeptide (six repeats) HPY08_RS17490 PF00571 CBS domain HPY08_RS17490 PF03471 Transporter associated domain HPY08_RS17490 PF01595 Cyclin M transmembrane N-terminal domain HPY08_RS17495 PF02566 OsmC-like protein HPY08_RS17500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region HPY08_RS17505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain HPY08_RS17505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain HPY08_RS17525 PF07992 Pyridine nucleotide-disulphide oxidoreductase HPY08_RS17530 PF13520 Amino acid permease HPY08_RS17535 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS17545 PF00248 Aldo/keto reductase family HPY08_RS17550 PF00128 Alpha amylase, catalytic domain HPY08_RS17560 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) HPY08_RS17565 PF12262 Bacterial virulence factor lipase N-terminal HPY08_RS17570 PF08447 PAS fold HPY08_RS17570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS17570 PF13426 PAS domain HPY08_RS17575 PF04151 Bacterial pre-peptidase C-terminal domain HPY08_RS17575 PF07504 Fungalysin/Thermolysin Propeptide Motif HPY08_RS17575 PF01447 Thermolysin metallopeptidase, catalytic domain HPY08_RS17575 PF03413 Peptidase propeptide and YPEB domain HPY08_RS17575 PF02868 Thermolysin metallopeptidase, alpha-helical domain HPY08_RS17585 PF03922 OmpW family HPY08_RS17595 PF00768 D-alanyl-D-alanine carboxypeptidase HPY08_RS17600 PF00773 RNB domain HPY08_RS17600 PF00575 S1 RNA binding domain HPY08_RS17600 PF08206 Ribonuclease B OB domain HPY08_RS17600 PF17876 Cold shock domain HPY08_RS17600 PF08461 Ribonuclease R winged-helix domain HPY08_RS17605 PF00313 'Cold-shock' DNA-binding domain HPY08_RS17615 PF00291 Pyridoxal-phosphate dependent enzyme HPY08_RS17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS17620 PF03466 LysR substrate binding domain HPY08_RS17640 PF02463 RecF/RecN/SMC N terminal domain HPY08_RS17645 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) HPY08_RS17650 PF08240 Alcohol dehydrogenase GroES-like domain HPY08_RS17650 PF00107 Zinc-binding dehydrogenase HPY08_RS17655 PF00155 Aminotransferase class I and II HPY08_RS17670 PF03466 LysR substrate binding domain HPY08_RS17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS17675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HPY08_RS17700 PF01966 HD domain HPY08_RS17705 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain HPY08_RS17705 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain HPY08_RS17710 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY08_RS17715 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain HPY08_RS17715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase HPY08_RS17740 PF02595 Glycerate kinase family HPY08_RS17745 PF02447 GntP family permease HPY08_RS17750 PF17853 GGDEF-like domain HPY08_RS17750 PF13556 PucR C-terminal helix-turn-helix domain HPY08_RS17750 PF05651 Putative sugar diacid recognition HPY08_RS17755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS17755 PF00672 HAMP domain HPY08_RS17760 PF01243 Pyridoxamine 5'-phosphate oxidase HPY08_RS17765 PF06228 Haem utilisation ChuX/HutX HPY08_RS17770 PF04055 Radical SAM superfamily HPY08_RS17775 PF03544 Gram-negative bacterial TonB protein C-terminal HPY08_RS17780 PF01618 MotA/TolQ/ExbB proton channel family HPY08_RS17785 PF02472 Biopolymer transport protein ExbD/TolR HPY08_RS17795 PF01032 FecCD transport family HPY08_RS17800 PF00005 ABC transporter HPY08_RS17830 PF02743 Cache domain HPY08_RS17830 PF00672 HAMP domain HPY08_RS17830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS17835 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY08_RS17835 PF03473 MOSC domain HPY08_RS17835 PF00111 2Fe-2S iron-sulfur cluster binding domain HPY08_RS17835 PF03473 MOSC domain HPY08_RS17835 PF03476 MOSC N-terminal beta barrel domain HPY08_RS17835 PF03476 MOSC N-terminal beta barrel domain HPY08_RS17840 PF01979 Amidohydrolase family HPY08_RS17845 PF05958 tRNA (Uracil-5-)-methyltransferase HPY08_RS17850 PF05661 Protein of unknown function (DUF808) HPY08_RS17855 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS17855 PF17151 Periplasmic sensor domain HPY08_RS17865 PF00313 'Cold-shock' DNA-binding domain HPY08_RS17890 PF08448 PAS fold HPY08_RS17890 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS17895 PF00455 DeoR C terminal sensor domain HPY08_RS17895 PF08220 DeoR-like helix-turn-helix domain HPY08_RS17910 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS17915 PF14785 Maltose transport system permease protein MalF P2 domain HPY08_RS17915 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS17920 PF01547 Bacterial extracellular solute-binding protein HPY08_RS17925 PF00005 ABC transporter HPY08_RS17925 PF08402 TOBE domain HPY08_RS17930 PF13302 Acetyltransferase (GNAT) domain HPY08_RS17945 PF01906 Putative heavy-metal-binding HPY08_RS17950 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS17960 PF00072 Response regulator receiver domain HPY08_RS17960 PF01584 CheW-like domain HPY08_RS17965 PF01047 MarR family HPY08_RS17970 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS17985 PF00563 EAL domain HPY08_RS17985 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS17985 PF03707 Bacterial signalling protein N terminal repeat HPY08_RS18005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS18005 PF03466 LysR substrate binding domain HPY08_RS18010 PF00563 EAL domain HPY08_RS18010 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS18020 PF02678 Pirin HPY08_RS18020 PF05726 Pirin C-terminal cupin domain HPY08_RS18025 PF06865 Pyrimidine/purine nucleoside phosphorylase HPY08_RS18035 PF07690 Major Facilitator Superfamily HPY08_RS18040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS18040 PF00672 HAMP domain HPY08_RS18040 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS18045 PF13654 AAA domain HPY08_RS18045 PF05362 Lon protease (S16) C-terminal proteolytic domain HPY08_RS18055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY08_RS18055 PF00005 ABC transporter HPY08_RS18060 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY08_RS18065 PF00672 HAMP domain HPY08_RS18065 PF17200 Single Cache domain 2 HPY08_RS18065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS18075 PF03466 LysR substrate binding domain HPY08_RS18085 PF02652 L-lactate permease HPY08_RS18090 PF01070 FMN-dependent dehydrogenase HPY08_RS18100 PF03618 Kinase/pyrophosphorylase HPY08_RS18105 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain HPY08_RS18105 PF02896 PEP-utilising enzyme, TIM barrel domain HPY08_RS18105 PF00391 PEP-utilising enzyme, mobile domain HPY08_RS18110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS18110 PF08447 PAS fold HPY08_RS18115 PF01554 MatE HPY08_RS18130 PF03473 MOSC domain HPY08_RS18130 PF03475 3-alpha domain HPY08_RS18135 PF00271 Helicase conserved C-terminal domain HPY08_RS18135 PF00270 DEAD/DEAH box helicase HPY08_RS18145 PF00005 ABC transporter HPY08_RS18145 PF00664 ABC transporter transmembrane region HPY08_RS18155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family HPY08_RS18165 PF01810 LysE type translocator HPY08_RS18170 PF12833 Helix-turn-helix domain HPY08_RS18185 PF01557 Fumarylacetoacetate (FAA) hydrolase family HPY08_RS18190 PF01047 MarR family HPY08_RS18195 PF02566 OsmC-like protein HPY08_RS18200 PF13609 Gram-negative porin HPY08_RS18205 PF00892 EamA-like transporter family HPY08_RS18210 PF00462 Glutaredoxin HPY08_RS18215 PF07670 Nucleoside recognition HPY08_RS18220 PF07670 Nucleoside recognition HPY08_RS18225 PF03600 Citrate transporter HPY08_RS18235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain HPY08_RS18235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain HPY08_RS18240 PF06029 AlkA N-terminal domain HPY08_RS18240 PF00730 HhH-GPD superfamily base excision DNA repair protein HPY08_RS18245 PF07681 DoxX HPY08_RS18250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS18250 PF03466 LysR substrate binding domain HPY08_RS18270 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase HPY08_RS18275 PF01797 Transposase IS200 like HPY08_RS18285 PF07148 Maltose operon periplasmic protein precursor (MalM) HPY08_RS18290 PF02264 LamB porin HPY08_RS18295 PF00128 Alpha amylase, catalytic domain HPY08_RS18295 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) HPY08_RS18305 PF00672 HAMP domain HPY08_RS18305 PF12729 Four helix bundle sensory module for signal transduction HPY08_RS18305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS18320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS18320 PF00672 HAMP domain HPY08_RS18325 PF05230 MASE2 domain HPY08_RS18325 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS18335 PF00793 DAHP synthetase I family HPY08_RS18340 PF00005 ABC transporter HPY08_RS18345 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS18350 PF00497 Bacterial extracellular solute-binding proteins, family 3 HPY08_RS18355 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS18360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III HPY08_RS18360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II HPY08_RS18360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain HPY08_RS18360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I HPY08_RS18365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HPY08_RS18365 PF02378 Phosphotransferase system, EIIC HPY08_RS18365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit HPY08_RS18370 PF01232 Mannitol dehydrogenase Rossmann domain HPY08_RS18370 PF08125 Mannitol dehydrogenase C-terminal domain HPY08_RS18375 PF05068 Mannitol repressor HPY08_RS18380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold HPY08_RS18410 PF13460 NAD(P)H-binding HPY08_RS18415 PF03466 LysR substrate binding domain HPY08_RS18415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS18420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS18420 PF02743 Cache domain HPY08_RS18420 PF00672 HAMP domain HPY08_RS18425 PF00106 short chain dehydrogenase HPY08_RS18430 PF03466 LysR substrate binding domain HPY08_RS18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family HPY08_RS18435 PF04013 Putative SAM-dependent RNA methyltransferase HPY08_RS18440 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase HPY08_RS18450 PF13520 Amino acid permease HPY08_RS18455 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain HPY08_RS18455 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain HPY08_RS18455 PF01276 Orn/Lys/Arg decarboxylase, major domain HPY08_RS18465 PF03472 Autoinducer binding domain HPY08_RS18465 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS18495 PF00171 Aldehyde dehydrogenase family HPY08_RS18500 PF01037 Lrp/AsnC ligand binding domain HPY08_RS18505 PF00672 HAMP domain HPY08_RS18505 PF02743 Cache domain HPY08_RS18505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS18515 PF00474 Sodium:solute symporter family HPY08_RS18525 PF01619 Proline dehydrogenase HPY08_RS18525 PF18327 Proline utilization A proline dehydrogenase N-terminal domain HPY08_RS18525 PF00171 Aldehyde dehydrogenase family HPY08_RS18525 PF14850 DNA-binding domain of Proline dehydrogenase HPY08_RS18530 PF12833 Helix-turn-helix domain HPY08_RS18540 PF03781 Sulfatase-modifying factor enzyme 1 HPY08_RS18545 PF00196 Bacterial regulatory proteins, luxR family HPY08_RS18545 PF00072 Response regulator receiver domain HPY08_RS18550 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region HPY08_RS18550 PF01243 Pyridoxamine 5'-phosphate oxidase HPY08_RS18555 PF00529 HlyD membrane-fusion protein of T1SS HPY08_RS18570 PF03412 Peptidase C39 family HPY08_RS18570 PF00005 ABC transporter HPY08_RS18570 PF00664 ABC transporter transmembrane region HPY08_RS18580 PF00072 Response regulator receiver domain HPY08_RS18580 PF00990 Diguanylate cyclase, GGDEF domain HPY08_RS18590 PF00672 HAMP domain HPY08_RS18590 PF02743 Cache domain HPY08_RS18590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS18595 PF01339 CheB methylesterase HPY08_RS18595 PF00072 Response regulator receiver domain HPY08_RS18600 PF03975 CheD chemotactic sensory transduction HPY08_RS18605 PF01739 CheR methyltransferase, SAM binding domain HPY08_RS18605 PF03705 CheR methyltransferase, all-alpha domain HPY08_RS18610 PF00672 HAMP domain HPY08_RS18610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain HPY08_RS18610 PF02203 Tar ligand binding domain homologue HPY08_RS18615 PF01584 CheW-like domain HPY08_RS18620 PF01584 CheW-like domain HPY08_RS18625 PF01627 Hpt domain HPY08_RS18625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS18625 PF09078 CheY binding HPY08_RS18625 PF02895 Signal transducing histidine kinase, homodimeric domain HPY08_RS18625 PF01584 CheW-like domain HPY08_RS18630 PF00072 Response regulator receiver domain HPY08_RS18645 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS18650 PF12911 N-terminal TM domain of oligopeptide transport permease C HPY08_RS18650 PF00528 Binding-protein-dependent transport system inner membrane component HPY08_RS18655 PF00005 ABC transporter HPY08_RS18655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region HPY08_RS18660 PF00884 Sulfatase HPY08_RS18660 PF08019 Phosphoethanolamine transferase EptA/EptB HPY08_RS18665 PF00512 His Kinase A (phospho-acceptor) domain HPY08_RS18665 PF08521 Two-component sensor kinase N-terminal HPY08_RS18665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HPY08_RS18670 PF00072 Response regulator receiver domain HPY08_RS18670 PF00486 Transcriptional regulatory protein, C terminal HPY08_RS18690 PF00501 AMP-binding enzyme HPY08_RS18700 PF13718 GNAT acetyltransferase 2 HPY08_RS18700 PF05127 Helicase HPY08_RS18705 PF13416 Bacterial extracellular solute-binding protein