locus-tag class description V060002_RS00010 PF00258 Flavodoxin V060002_RS00040 PF00809 Pterin binding enzyme V060002_RS00045 PF00893 Small Multidrug Resistance protein V060002_RS00050 PF13427 Domain of unknown function (DUF4111) V060002_RS00050 PF01909 Nucleotidyltransferase domain V060002_RS00055 PF13495 Phage integrase, N-terminal SAM-like domain V060002_RS00055 PF00589 Phage integrase family V060002_RS00060 PF17728 BsuBI/PstI restriction endonuclease HTH domain V060002_RS00060 PF06616 BsuBI/PstI restriction endonuclease domain V060002_RS00105 PF06122 Conjugative relaxosome accessory transposon protein V060002_RS00155 PF02899 Phage integrase, N-terminal SAM-like domain V060002_RS00155 PF00589 Phage integrase family V060002_RS00160 PF01926 50S ribosome-binding GTPase V060002_RS00160 PF12631 MnmE helical domain V060002_RS00160 PF10396 GTP-binding protein TrmE N-terminus V060002_RS00165 PF14849 YidC periplasmic domain V060002_RS00165 PF02096 60Kd inner membrane protein V060002_RS00170 PF01809 Putative membrane protein insertion efficiency factor V060002_RS00175 PF00825 Ribonuclease P V060002_RS00180 PF00468 Ribosomal protein L34 V060002_RS00185 PF00005 ABC transporter V060002_RS00190 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS00195 PF00497 Bacterial extracellular solute-binding proteins, family 3 V060002_RS00200 PF08299 Bacterial dnaA protein helix-turn-helix V060002_RS00200 PF00308 Bacterial dnaA protein V060002_RS00200 PF11638 DnaA N-terminal domain V060002_RS00205 PF02768 DNA polymerase III beta subunit, C-terminal domain V060002_RS00205 PF00712 DNA polymerase III beta subunit, N-terminal domain V060002_RS00205 PF02767 DNA polymerase III beta subunit, central domain V060002_RS00210 PF02463 RecF/RecN/SMC N terminal domain V060002_RS00215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS00215 PF18053 DNA gyrase B subunit insert domain V060002_RS00215 PF00204 DNA gyrase B V060002_RS00215 PF00986 DNA gyrase B subunit, carboxyl terminus V060002_RS00215 PF01751 Toprim domain V060002_RS00230 PF00011 Hsp20/alpha crystallin family V060002_RS00235 PF00155 Aminotransferase class I and II V060002_RS00245 PF02092 Glycyl-tRNA synthetase beta subunit V060002_RS00245 PF05746 DALR anticodon binding domain V060002_RS00250 PF02091 Glycyl-tRNA synthetase alpha subunit V060002_RS00255 PF01169 Uncharacterized protein family UPF0016 V060002_RS00270 PF01206 Sulfurtransferase TusA V060002_RS00280 PF00107 Zinc-binding dehydrogenase V060002_RS00280 PF08240 Alcohol dehydrogenase GroES-like domain V060002_RS00285 PF00291 Pyridoxal-phosphate dependent enzyme V060002_RS00285 PF00585 C-terminal regulatory domain of Threonine dehydratase V060002_RS00290 PF00920 Dehydratase family V060002_RS00295 PF01063 Amino-transferase class IV V060002_RS00305 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V060002_RS00305 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V060002_RS00305 PF00205 Thiamine pyrophosphate enzyme, central domain V060002_RS00310 PF01078 Magnesium chelatase, subunit ChlI V060002_RS00310 PF13335 Magnesium chelatase, subunit ChlI C-terminal V060002_RS00315 PF01553 Acyltransferase V060002_RS00320 PF01323 DSBA-like thioredoxin domain V060002_RS00325 PF01636 Phosphotransferase enzyme family V060002_RS00330 PF12801 4Fe-4S binding domain V060002_RS00330 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase V060002_RS00330 PF13746 4Fe-4S dicluster domain V060002_RS00340 PF06288 Protein of unknown function (DUF1040) V060002_RS00350 PF07070 SpoOM protein V060002_RS00355 PF03006 Haemolysin-III related V060002_RS00365 PF02386 Cation transport protein V060002_RS00370 PF02254 TrkA-N domain V060002_RS00370 PF02080 TrkA-C domain V060002_RS00375 PF01029 NusB family V060002_RS00375 PF01189 16S rRNA methyltransferase RsmB/F V060002_RS00380 PF00551 Formyl transferase V060002_RS00380 PF02911 Formyl transferase, C-terminal domain V060002_RS00385 PF01327 Polypeptide deformylase V060002_RS00390 PF01476 LysM domain V060002_RS00395 PF02481 DNA recombination-mediator protein A V060002_RS00395 PF17782 DprA winged helix domain V060002_RS00400 PF04361 Protein of unknown function (DUF494) V060002_RS00405 PF01396 Topoisomerase DNA binding C4 zinc finger V060002_RS00410 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain V060002_RS00410 PF02222 ATP-grasp domain V060002_RS00415 PF00731 AIR carboxylase V060002_RS00420 PF01300 Telomere recombination V060002_RS00425 PF01218 Coproporphyrinogen III oxidase V060002_RS00430 PF08501 Shikimate dehydrogenase substrate binding domain V060002_RS00430 PF18317 Shikimate 5'-dehydrogenase C-terminal domain V060002_RS00430 PF01488 Shikimate / quinate 5-dehydrogenase V060002_RS00440 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS00480 PF02537 CrcB-like protein, Camphor Resistance (CrcB) V060002_RS00485 PF01964 Radical SAM ThiC family V060002_RS00485 PF13667 ThiC-associated domain V060002_RS00490 PF02581 Thiamine monophosphate synthase V060002_RS00495 PF00899 ThiF family V060002_RS00500 PF02597 ThiS family V060002_RS00505 PF05690 Thiazole biosynthesis protein ThiG V060002_RS00510 PF04055 Radical SAM superfamily V060002_RS00510 PF06968 Biotin and Thiamin Synthesis associated domain V060002_RS00515 PF00557 Metallopeptidase family M24 V060002_RS00515 PF01321 Creatinase/Prolidase N-terminal domain V060002_RS00515 PF00557 Metallopeptidase family M24 V060002_RS00515 PF01321 Creatinase/Prolidase N-terminal domain V060002_RS00520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS00520 PF03466 LysR substrate binding domain V060002_RS00525 PF07690 Major Facilitator Superfamily V060002_RS00535 PF01037 Lrp/AsnC ligand binding domain V060002_RS00540 PF00563 EAL domain V060002_RS00540 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS00540 PF08448 PAS fold V060002_RS00545 PF04445 Putative SAM-dependent methyltransferase V060002_RS00555 PF00892 EamA-like transporter family V060002_RS00560 PF00582 Universal stress protein family V060002_RS00570 PF00210 Ferritin-like domain V060002_RS00575 PF10625 Universal stress protein B (UspB) V060002_RS00590 PF02646 RmuC family V060002_RS00595 PF01209 ubiE/COQ5 methyltransferase family V060002_RS00600 PF02036 SCP-2 sterol transfer family V060002_RS00605 PF03109 ABC1 family V060002_RS00610 PF02416 mttA/Hcf106 family V060002_RS00615 PF02416 mttA/Hcf106 family V060002_RS00620 PF00902 Sec-independent protein translocase protein (TatC) V060002_RS00625 PF03150 Di-haem cytochrome c peroxidase V060002_RS00625 PF00034 Cytochrome c V060002_RS00630 PF01554 MatE V060002_RS00640 PF00717 Peptidase S24-like V060002_RS00640 PF01726 LexA DNA binding domain V060002_RS00650 PF01553 Acyltransferase V060002_RS00655 PF01040 UbiA prenyltransferase family V060002_RS00660 PF04345 Chorismate lyase V060002_RS00670 PF03748 Flagellar basal body-associated protein FliL V060002_RS00675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS00675 PF00672 HAMP domain V060002_RS00675 PF02203 Tar ligand binding domain homologue V060002_RS00680 PF01694 Rhomboid family V060002_RS00680 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease V060002_RS00685 PF00581 Rhodanese-like domain V060002_RS00695 PF01026 TatD related DNase V060002_RS00700 PF00490 Delta-aminolevulinic acid dehydratase V060002_RS00710 PF01367 5'-3' exonuclease, C-terminal SAM fold V060002_RS00710 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain V060002_RS00710 PF00476 DNA polymerase family A V060002_RS00710 PF01612 3'-5' exonuclease V060002_RS00715 PF01926 50S ribosome-binding GTPase V060002_RS00720 PF00034 Cytochrome c V060002_RS00730 PF04220 Der GTPase activator (YihI) V060002_RS00735 PF10675 Protein of unknown function (DUF2489) V060002_RS00740 PF04055 Radical SAM superfamily V060002_RS00740 PF06969 HemN C-terminal domain V060002_RS00745 PF07219 HemY protein N-terminus V060002_RS00750 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase V060002_RS00755 PF02602 Uroporphyrinogen-III synthase HemD V060002_RS00760 PF03900 Porphobilinogen deaminase, C-terminal domain V060002_RS00760 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain V060002_RS00770 PF12633 Adenylate cyclase NT domain V060002_RS00770 PF01295 Adenylate cyclase, class-I V060002_RS00775 PF01491 Frataxin-like domain V060002_RS00785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain V060002_RS00785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain V060002_RS00790 PF01678 Diaminopimelate epimerase V060002_RS00795 PF04340 Protein of unknown function, DUF484 V060002_RS00800 PF02899 Phage integrase, N-terminal SAM-like domain V060002_RS00800 PF00589 Phage integrase family V060002_RS00805 PF13419 Haloacid dehalogenase-like hydrolase V060002_RS00810 PF08495 FIST N domain V060002_RS00810 PF00563 EAL domain V060002_RS00810 PF10442 FIST C domain V060002_RS00810 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS00835 PF12146 Serine aminopeptidase, S33 V060002_RS00840 PF01810 LysE type translocator V060002_RS00845 PF00563 EAL domain V060002_RS00845 PF08668 HDOD domain V060002_RS00850 PF00210 Ferritin-like domain V060002_RS00895 PF02881 SRP54-type protein, helical bundle domain V060002_RS00895 PF00448 SRP54-type protein, GTPase domain V060002_RS00900 PF00005 ABC transporter V060002_RS00905 PF18075 FtsX extracellular domain V060002_RS00910 PF04545 Sigma-70, region 4 V060002_RS00910 PF04542 Sigma-70 region 2 V060002_RS00910 PF00140 Sigma-70 factor, region 1.2 V060002_RS00915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V060002_RS00915 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS00925 PF00440 Bacterial regulatory proteins, tetR family V060002_RS00935 PF05958 tRNA (Uracil-5-)-methyltransferase V060002_RS00940 PF00593 TonB dependent receptor V060002_RS00940 PF07715 TonB-dependent Receptor Plug Domain V060002_RS00945 PF05922 Peptidase inhibitor I9 V060002_RS00945 PF00082 Subtilase family V060002_RS00945 PF04151 Bacterial pre-peptidase C-terminal domain V060002_RS00950 PF01177 Asp/Glu/Hydantoin racemase V060002_RS01020 PF00962 Adenosine/AMP deaminase V060002_RS01025 PF00563 EAL domain V060002_RS01025 PF03707 Bacterial signalling protein N terminal repeat V060002_RS01025 PF13188 PAS domain V060002_RS01025 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS01030 PF00158 Sigma-54 interaction domain V060002_RS01030 PF02954 Bacterial regulatory protein, Fis family V060002_RS01030 PF00072 Response regulator receiver domain V060002_RS01035 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS01035 PF00989 PAS fold V060002_RS01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS01045 PF00120 Glutamine synthetase, catalytic domain V060002_RS01045 PF03951 Glutamine synthetase, beta-Grasp domain V060002_RS01055 PF03144 Elongation factor Tu domain 2 V060002_RS01055 PF00009 Elongation factor Tu GTP binding domain V060002_RS01055 PF00679 Elongation factor G C-terminus V060002_RS01060 PF03668 P-loop ATPase protein family V060002_RS01065 PF03631 Virulence factor BrkB V060002_RS01070 PF02580 D-Tyr-tRNA(Tyr) deacylase V060002_RS01075 PF09500 Putative thioesterase (yiiD_Cterm) V060002_RS01075 PF00583 Acetyltransferase (GNAT) family V060002_RS01085 PF01293 Phosphoenolpyruvate carboxykinase V060002_RS01090 PF01430 Hsp33 protein V060002_RS01095 PF01479 S4 domain V060002_RS01100 PF11356 Type II secretion system protein C V060002_RS01105 PF03958 Bacterial type II/III secretion system short domain V060002_RS01105 PF00263 Bacterial type II and III secretion system protein V060002_RS01110 PF00437 Type II/IV secretion system protein V060002_RS01115 PF00482 Type II secretion system (T2SS), protein F V060002_RS01120 PF08334 Type II secretion system (T2SS), protein G V060002_RS01120 PF07963 Prokaryotic N-terminal methylation motif V060002_RS01125 PF12019 Type II transport protein GspH V060002_RS01130 PF02501 Type II secretion system (T2SS), protein I V060002_RS01130 PF07963 Prokaryotic N-terminal methylation motif V060002_RS01135 PF11612 Type II secretion system (T2SS), protein J V060002_RS01135 PF07963 Prokaryotic N-terminal methylation motif V060002_RS01140 PF03934 Type II secretion system (T2SS), protein K V060002_RS01145 PF05134 Type II secretion system (T2SS), protein L V060002_RS01145 PF12693 GspL periplasmic domain V060002_RS01150 PF04612 Type II secretion system (T2SS), protein M V060002_RS01155 PF01203 Type II secretion system (T2SS), protein N V060002_RS01160 PF00459 Inositol monophosphatase family V060002_RS01165 PF00293 NUDIX domain V060002_RS01170 PF01106 NifU-like domain V060002_RS01170 PF01521 Iron-sulphur cluster biosynthesis V060002_RS01175 PF00156 Phosphoribosyl transferase domain V060002_RS01180 PF00561 alpha/beta hydrolase fold V060002_RS01190 PF09371 Tex-like protein N-terminal domain V060002_RS01190 PF16921 Tex protein YqgF-like domain V060002_RS01190 PF17674 HHH domain V060002_RS01190 PF00575 S1 RNA binding domain V060002_RS01195 PF03449 Transcription elongation factor, N-terminal V060002_RS01195 PF01272 Transcription elongation factor, GreA/GreB, C-term V060002_RS01200 PF00486 Transcriptional regulatory protein, C terminal V060002_RS01200 PF00072 Response regulator receiver domain V060002_RS01205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS01205 PF00672 HAMP domain V060002_RS01205 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS01210 PF00860 Permease family V060002_RS01215 PF00270 DEAD/DEAH box helicase V060002_RS01215 PF00271 Helicase conserved C-terminal domain V060002_RS01215 PF17191 RecG wedge domain V060002_RS01220 PF04607 Region found in RelA / SpoT proteins V060002_RS01220 PF13291 ACT domain V060002_RS01220 PF02824 TGS domain V060002_RS01225 PF01192 RNA polymerase Rpb6 V060002_RS01230 PF00625 Guanylate kinase V060002_RS01235 PF02592 Putative vitamin uptake transporter V060002_RS01240 PF00474 Sodium:solute symporter family V060002_RS01250 PF03471 Transporter associated domain V060002_RS01250 PF00999 Sodium/hydrogen exchanger family V060002_RS01250 PF02080 TrkA-C domain V060002_RS01255 PF00072 Response regulator receiver domain V060002_RS01255 PF00196 Bacterial regulatory proteins, luxR family V060002_RS01260 PF02683 Cytochrome C biogenesis protein transmembrane region V060002_RS01260 PF11412 Disulphide bond corrector protein DsbC V060002_RS01275 PF00206 Lyase V060002_RS01275 PF10415 Fumarase C C-terminus V060002_RS01280 PF17158 Membrane-associated sensor, integral membrane domain V060002_RS01280 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS01285 PF04186 FxsA cytoplasmic membrane protein V060002_RS01290 PF00588 SpoU rRNA Methylase family V060002_RS01295 PF02777 Iron/manganese superoxide dismutases, C-terminal domain V060002_RS01295 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain V060002_RS01300 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS01300 PF16527 Two-component sensor protein CpxA, periplasmic domain V060002_RS01300 PF00672 HAMP domain V060002_RS01300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS01305 PF00072 Response regulator receiver domain V060002_RS01305 PF00486 Transcriptional regulatory protein, C terminal V060002_RS01315 PF16916 Dimerisation domain of Zinc Transporter V060002_RS01315 PF01545 Cation efflux family V060002_RS01320 PF00365 Phosphofructokinase V060002_RS01325 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded V060002_RS01335 PF02219 Methylenetetrahydrofolate reductase V060002_RS01340 PF00696 Amino acid kinase family V060002_RS01340 PF03447 Homoserine dehydrogenase, NAD binding domain V060002_RS01340 PF00742 Homoserine dehydrogenase V060002_RS01345 PF01053 Cys/Met metabolism PLP-dependent enzyme V060002_RS01350 PF01340 Met Apo-repressor, MetJ V060002_RS01355 PF00390 Malic enzyme, N-terminal domain V060002_RS01355 PF03949 Malic enzyme, NAD binding domain V060002_RS01360 PF01197 Ribosomal protein L31 V060002_RS01365 PF00271 Helicase conserved C-terminal domain V060002_RS01365 PF18319 PriA DNA helicase Cys-rich region (CRR) domain V060002_RS01365 PF00270 DEAD/DEAH box helicase V060002_RS01365 PF18074 Primosomal protein N C-terminal domain V060002_RS01365 PF17764 3′ DNA-binding domain (3′BD) V060002_RS01370 PF00356 Bacterial regulatory proteins, lacI family V060002_RS01375 PF05036 Sporulation related domain V060002_RS01380 PF00227 Proteasome subunit V060002_RS01385 PF00004 ATPase family associated with various cellular activities (AAA) V060002_RS01385 PF07724 AAA domain (Cdc48 subfamily) V060002_RS01385 PF10431 C-terminal, D2-small domain, of ClpB protein V060002_RS01390 PF01040 UbiA prenyltransferase family V060002_RS01395 PF03737 Aldolase/RraA V060002_RS01400 PF01554 MatE V060002_RS01405 PF00121 Triosephosphate isomerase V060002_RS01430 PF08220 DeoR-like helix-turn-helix domain V060002_RS01430 PF00455 DeoR C terminal sensor domain V060002_RS01435 PF00166 Chaperonin 10 Kd subunit V060002_RS01440 PF00118 TCP-1/cpn60 chaperonin family V060002_RS01450 PF04055 Radical SAM superfamily V060002_RS01455 PF01132 Elongation factor P (EF-P) OB domain V060002_RS01455 PF09285 Elongation factor P, C-terminal V060002_RS01455 PF08207 Elongation factor P (EF-P) KOW-like domain V060002_RS01460 PF02313 Fumarate reductase subunit D V060002_RS01465 PF02300 Fumarate reductase subunit C V060002_RS01470 PF13183 4Fe-4S dicluster domain V060002_RS01470 PF13085 2Fe-2S iron-sulfur cluster binding domain V060002_RS01475 PF02910 Fumarate reductase flavoprotein C-term V060002_RS01475 PF00890 FAD binding domain V060002_RS01480 PF00152 tRNA synthetases class II (D, K and N) V060002_RS01485 PF00581 Rhodanese-like domain V060002_RS01490 PF02556 Preprotein translocase subunit SecB V060002_RS01495 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus V060002_RS01495 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus V060002_RS01500 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS01500 PF06426 Serine acetyltransferase, N-terminal V060002_RS01510 PF00311 Phosphoenolpyruvate carboxylase V060002_RS01515 PF07687 Peptidase dimerisation domain V060002_RS01515 PF01546 Peptidase family M20/M25/M40 V060002_RS01520 PF02774 Semialdehyde dehydrogenase, dimerisation domain V060002_RS01520 PF01118 Semialdehyde dehydrogenase, NAD binding domain V060002_RS01525 PF00696 Amino acid kinase family V060002_RS01530 PF00764 Arginosuccinate synthase V060002_RS01540 PF14698 Argininosuccinate lyase C-terminal V060002_RS01540 PF00206 Lyase V060002_RS01550 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS01550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V060002_RS01555 PF08534 Redoxin V060002_RS01555 PF00462 Glutaredoxin V060002_RS01560 PF03466 LysR substrate binding domain V060002_RS01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS01565 PF00905 Penicillin binding protein transpeptidase domain V060002_RS01565 PF17092 Penicillin-binding protein OB-like domain V060002_RS01565 PF00912 Transglycosylase V060002_RS01585 PF04351 Pilus assembly protein, PilP V060002_RS01590 PF00263 Bacterial type II and III secretion system protein V060002_RS01590 PF07660 Secretin and TonB N terminus short domain V060002_RS01590 PF03958 Bacterial type II/III secretion system short domain V060002_RS01590 PF11741 AMIN domain V060002_RS01595 PF01202 Shikimate kinase V060002_RS01600 PF01761 3-dehydroquinate synthase V060002_RS01610 PF02086 D12 class N6 adenine-specific DNA methyltransferase V060002_RS01615 PF00834 Ribulose-phosphate 3 epimerase family V060002_RS01620 PF13419 Haloacid dehalogenase-like hydrolase V060002_RS01625 PF00579 tRNA synthetases class I (W and Y) V060002_RS01640 PF00919 Uncharacterized protein family UPF0004 V060002_RS01640 PF18693 TRAM domain V060002_RS01640 PF04055 Radical SAM superfamily V060002_RS01645 PF00117 Glutamine amidotransferase class-I V060002_RS01650 PF00202 Aminotransferase class-III V060002_RS01655 PF04958 Arginine N-succinyltransferase beta subunit V060002_RS01660 PF00171 Aldehyde dehydrogenase family V060002_RS01670 PF00027 Cyclic nucleotide-binding domain V060002_RS01670 PF13545 Crp-like helix-turn-helix domain V060002_RS01675 PF00485 Phosphoribulokinase / Uridine kinase family V060002_RS01680 PF06794 Uncharacterised protein family (UPF0270) V060002_RS01685 PF00561 alpha/beta hydrolase fold V060002_RS01695 PF00005 ABC transporter V060002_RS01695 PF12848 ABC transporter V060002_RS01700 PF02525 Flavodoxin-like fold V060002_RS01705 PF00999 Sodium/hydrogen exchanger family V060002_RS01705 PF02254 TrkA-N domain V060002_RS01715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V060002_RS01720 PF01112 Asparaginase V060002_RS01725 PF00709 Adenylosuccinate synthetase V060002_RS01735 PF08238 Sel1 repeat V060002_RS01740 PF11893 Domain of unknown function (DUF3413) V060002_RS01740 PF00884 Sulfatase V060002_RS01745 PF17876 Cold shock domain V060002_RS01745 PF00575 S1 RNA binding domain V060002_RS01745 PF00773 RNB domain V060002_RS01745 PF08206 Ribonuclease B OB domain V060002_RS01745 PF08461 Ribonuclease R winged-helix domain V060002_RS01750 PF00588 SpoU rRNA Methylase family V060002_RS01750 PF08032 RNA 2'-O ribose methyltransferase substrate binding V060002_RS01755 PF00338 Ribosomal protein S10p/S20e V060002_RS01760 PF00297 Ribosomal protein L3 V060002_RS01765 PF00573 Ribosomal protein L4/L1 family V060002_RS01770 PF00276 Ribosomal protein L23 V060002_RS01775 PF00181 Ribosomal Proteins L2, RNA binding domain V060002_RS01775 PF03947 Ribosomal Proteins L2, C-terminal domain V060002_RS01780 PF00203 Ribosomal protein S19 V060002_RS01785 PF00237 Ribosomal protein L22p/L17e V060002_RS01790 PF07650 KH domain V060002_RS01790 PF00189 Ribosomal protein S3, C-terminal domain V060002_RS01795 PF00252 Ribosomal protein L16p/L10e V060002_RS01800 PF00831 Ribosomal L29 protein V060002_RS01805 PF00366 Ribosomal protein S17 V060002_RS01810 PF00238 Ribosomal protein L14p/L23e V060002_RS01815 PF00467 KOW motif V060002_RS01815 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 V060002_RS01820 PF00281 Ribosomal protein L5 V060002_RS01820 PF00673 ribosomal L5P family C-terminus V060002_RS01825 PF00253 Ribosomal protein S14p/S29e V060002_RS01830 PF00410 Ribosomal protein S8 V060002_RS01835 PF00347 Ribosomal protein L6 V060002_RS01840 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast V060002_RS01845 PF03719 Ribosomal protein S5, C-terminal domain V060002_RS01845 PF00333 Ribosomal protein S5, N-terminal domain V060002_RS01850 PF00327 Ribosomal protein L30p/L7e V060002_RS01855 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A V060002_RS01860 PF00344 SecY translocase V060002_RS01865 PF00444 Ribosomal protein L36 V060002_RS01870 PF00416 Ribosomal protein S13/S18 V060002_RS01875 PF00411 Ribosomal protein S11 V060002_RS01880 PF00163 Ribosomal protein S4/S9 N-terminal domain V060002_RS01880 PF01479 S4 domain V060002_RS01885 PF01000 RNA polymerase Rpb3/RpoA insert domain V060002_RS01885 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain V060002_RS01885 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain V060002_RS01890 PF01196 Ribosomal protein L17 V060002_RS01900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V060002_RS01900 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase V060002_RS01905 PF08525 Opacity-associated protein A N-terminal motif V060002_RS01905 PF04225 Opacity-associated protein A LysM-like domain V060002_RS01910 PF00892 EamA-like transporter family V060002_RS01915 PF13673 Acetyltransferase (GNAT) domain V060002_RS01920 PF00271 Helicase conserved C-terminal domain V060002_RS01920 PF00270 DEAD/DEAH box helicase V060002_RS01920 PF03880 DbpA RNA binding domain V060002_RS01930 PF02872 5'-nucleotidase, C-terminal domain V060002_RS01930 PF00149 Calcineurin-like phosphoesterase V060002_RS01935 PF14824 Sirohaem biosynthesis protein central V060002_RS01935 PF10414 Sirohaem synthase dimerisation region V060002_RS01935 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V060002_RS01940 PF01507 Phosphoadenosine phosphosulfate reductase family V060002_RS01945 PF00009 Elongation factor Tu GTP binding domain V060002_RS01970 PF00005 ABC transporter V060002_RS01980 PF10795 Protein of unknown function (DUF2607) V060002_RS01985 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) V060002_RS01990 PF01625 Peptide methionine sulfoxide reductase V060002_RS01995 PF17243 POTRA domain TamA domain 1 V060002_RS01995 PF01103 Surface antigen V060002_RS01995 PF07244 Surface antigen variable number repeat V060002_RS02000 PF04357 TamB, inner membrane protein subunit of TAM complex V060002_RS02005 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like V060002_RS02010 PF00719 Inorganic pyrophosphatase V060002_RS02015 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain V060002_RS02025 PF02875 Mur ligase family, glutamate ligase domain V060002_RS02025 PF01225 Mur ligase family, catalytic domain V060002_RS02025 PF08245 Mur ligase middle domain V060002_RS02030 PF02441 Flavoprotein V060002_RS02040 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS02045 PF00005 ABC transporter V060002_RS02050 PF04751 Protein of unknown function (DUF615) V060002_RS02055 PF01523 Putative modulator of DNA gyrase V060002_RS02060 PF03448 MgtE intracellular N domain V060002_RS02060 PF01769 Divalent cation transporter V060002_RS02060 PF00571 CBS domain V060002_RS02065 PF00381 PTS HPr component phosphorylation site V060002_RS02070 PF03668 P-loop ATPase protein family V060002_RS02075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V060002_RS02080 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein V060002_RS02085 PF04552 Sigma-54, DNA binding domain V060002_RS02085 PF00309 Sigma-54 factor, Activator interacting domain (AID) V060002_RS02085 PF04963 Sigma-54 factor, core binding domain V060002_RS02090 PF00005 ABC transporter V060002_RS02090 PF12399 Branched-chain amino acid ATP-binding cassette transporter V060002_RS02095 PF03968 OstA-like protein V060002_RS02110 PF00571 CBS domain V060002_RS02110 PF01380 SIS domain V060002_RS02115 PF01699 Sodium/calcium exchanger protein V060002_RS02125 PF00005 ABC transporter V060002_RS02130 PF02405 Permease MlaE V060002_RS02135 PF02470 MlaD protein V060002_RS02140 PF05494 MlaC protein V060002_RS02150 PF01722 BolA-like protein V060002_RS02155 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) V060002_RS02160 PF01553 Acyltransferase V060002_RS02165 PF01042 Endoribonuclease L-PSP V060002_RS02170 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain V060002_RS02170 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain V060002_RS02175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V060002_RS02175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V060002_RS02180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain V060002_RS02180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain V060002_RS02185 PF02562 PhoH-like protein V060002_RS02185 PF13638 PIN domain V060002_RS02195 PF12137 RNA polymerase recycling family C-terminal V060002_RS02195 PF00176 SNF2 family N-terminal domain V060002_RS02195 PF00271 Helicase conserved C-terminal domain V060002_RS02195 PF18337 RapA N-terminal Tudor like domain V060002_RS02195 PF18339 RapA N-terminal Tudor like domain 1 V060002_RS02200 PF00849 RNA pseudouridylate synthase V060002_RS02205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V060002_RS02205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V060002_RS02210 PF00133 tRNA synthetases class I (I, L, M and V) V060002_RS02210 PF10458 Valyl tRNA synthetase tRNA binding arm V060002_RS02210 PF08264 Anticodon-binding domain of tRNA V060002_RS02215 PF04364 DNA polymerase III chi subunit, HolC V060002_RS02220 PF00883 Cytosol aminopeptidase family, catalytic domain V060002_RS02220 PF02789 Cytosol aminopeptidase family, N-terminal domain V060002_RS02225 PF03739 Lipopolysaccharide export system permease LptF/LptG V060002_RS02230 PF03739 Lipopolysaccharide export system permease LptF/LptG V060002_RS02245 PF00072 Response regulator receiver domain V060002_RS02290 PF00694 Aconitase C-terminal domain V060002_RS02295 PF00330 Aconitase family (aconitate hydratase) V060002_RS02300 PF00180 Isocitrate/isopropylmalate dehydrogenase V060002_RS02305 PF00682 HMGL-like V060002_RS02305 PF08502 LeuA allosteric (dimerisation) domain V060002_RS02315 PF01569 PAP2 superfamily V060002_RS02325 PF03466 LysR substrate binding domain V060002_RS02325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS02330 PF00501 AMP-binding enzyme V060002_RS02335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V060002_RS02335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V060002_RS02335 PF00205 Thiamine pyrophosphate enzyme, central domain V060002_RS02340 PF10369 Small subunit of acetolactate synthase V060002_RS02345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V060002_RS02345 PF01842 ACT domain V060002_RS02345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V060002_RS02350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) V060002_RS02355 PF01812 5-formyltetrahydrofolate cyclo-ligase family V060002_RS02365 PF05164 Cell division protein ZapA V060002_RS02370 PF03695 Uncharacterised protein family (UPF0149) V060002_RS02375 PF01494 FAD binding domain V060002_RS02380 PF01494 FAD binding domain V060002_RS02395 PF03937 Flavinator of succinate dehydrogenase V060002_RS02405 PF02910 Fumarate reductase flavoprotein C-term V060002_RS02405 PF00890 FAD binding domain V060002_RS02415 PF04542 Sigma-70 region 2 V060002_RS02415 PF08281 Sigma-70, region 4 V060002_RS02420 PF03872 Anti sigma-E protein RseA, N-terminal domain V060002_RS02420 PF03873 Anti sigma-E protein RseA, C-terminal domain V060002_RS02425 PF03888 MucB/RseB N-terminal domain V060002_RS02425 PF17188 MucB/RseB C-terminal domain V060002_RS02435 PF06421 GTP-binding protein LepA C-terminus V060002_RS02435 PF03144 Elongation factor Tu domain 2 V060002_RS02435 PF00009 Elongation factor Tu GTP binding domain V060002_RS02435 PF00679 Elongation factor G C-terminus V060002_RS02440 PF10502 Signal peptidase, peptidase S26 V060002_RS02445 PF00035 Double-stranded RNA binding motif V060002_RS02445 PF14622 Ribonuclease-III-like V060002_RS02450 PF01926 50S ribosome-binding GTPase V060002_RS02450 PF07650 KH domain V060002_RS02455 PF11967 Recombination protein O N terminal V060002_RS02455 PF02565 Recombination protein O C terminal V060002_RS02460 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ V060002_RS02465 PF01648 4'-phosphopantetheinyl transferase superfamily V060002_RS02480 PF00563 EAL domain V060002_RS02480 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS02485 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V060002_RS02485 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS02485 PF01627 Hpt domain V060002_RS02485 PF00072 Response regulator receiver domain V060002_RS02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS02485 PF00672 HAMP domain V060002_RS02490 PF05958 tRNA (Uracil-5-)-methyltransferase V060002_RS02490 PF01938 TRAM domain V060002_RS02495 PF04607 Region found in RelA / SpoT proteins V060002_RS02495 PF02824 TGS domain V060002_RS02495 PF13291 ACT domain V060002_RS02500 PF03819 MazG nucleotide pyrophosphohydrolase domain V060002_RS02505 PF06418 CTP synthase N-terminus V060002_RS02505 PF00117 Glutamine amidotransferase class-I V060002_RS02510 PF00113 Enolase, C-terminal TIM barrel domain V060002_RS02510 PF03952 Enolase, N-terminal domain V060002_RS02515 PF01966 HD domain V060002_RS02515 PF01743 Poly A polymerase head domain V060002_RS02515 PF12627 Probable RNA and SrmB- binding site of polymerase A V060002_RS02520 PF13401 AAA domain V060002_RS02520 PF01471 Putative peptidoglycan binding domain V060002_RS02530 PF08239 Bacterial SH3 domain V060002_RS02535 PF01384 Phosphate transporter family V060002_RS02540 PF01865 Protein of unknown function DUF47 V060002_RS02545 PF01928 CYTH domain V060002_RS02550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS02550 PF00672 HAMP domain V060002_RS02550 PF02743 Cache domain V060002_RS02565 PF00113 Enolase, C-terminal TIM barrel domain V060002_RS02565 PF03952 Enolase, N-terminal domain V060002_RS02570 PF01966 HD domain V060002_RS02570 PF01743 Poly A polymerase head domain V060002_RS02570 PF12627 Probable RNA and SrmB- binding site of polymerase A V060002_RS02575 PF13401 AAA domain V060002_RS02575 PF01471 Putative peptidoglycan binding domain V060002_RS02585 PF08239 Bacterial SH3 domain V060002_RS02590 PF01384 Phosphate transporter family V060002_RS02595 PF01865 Protein of unknown function DUF47 V060002_RS02600 PF01928 CYTH domain V060002_RS02605 PF02743 Cache domain V060002_RS02605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS02605 PF00672 HAMP domain V060002_RS02610 PF03710 Glutamate-ammonia ligase adenylyltransferase V060002_RS02610 PF08335 GlnD PII-uridylyltransferase V060002_RS02615 PF01467 Cytidylyltransferase-like V060002_RS02615 PF00294 pfkB family carbohydrate kinase V060002_RS02620 PF02321 Outer membrane efflux protein V060002_RS02625 PF00293 NUDIX domain V060002_RS02630 PF06853 Protein of unknown function (DUF1249) V060002_RS02635 PF00149 Calcineurin-like phosphoesterase V060002_RS02640 PF05728 Uncharacterised protein family (UPF0227) V060002_RS02645 PF00986 DNA gyrase B subunit, carboxyl terminus V060002_RS02645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS02645 PF01751 Toprim domain V060002_RS02645 PF00204 DNA gyrase B V060002_RS02650 PF03989 DNA gyrase C-terminal domain, beta-propeller V060002_RS02650 PF00521 DNA gyrase/topoisomerase IV, subunit A V060002_RS02655 PF03884 DNA gyrase inhibitor YacG V060002_RS02660 PF07072 Cell division protein V060002_RS02665 PF01121 Dephospho-CoA kinase V060002_RS02670 PF06750 Bacterial Peptidase A24 N-terminal domain V060002_RS02670 PF01478 Type IV leader peptidase family V060002_RS02675 PF00482 Type II secretion system (T2SS), protein F V060002_RS02680 PF00437 Type II/IV secretion system protein V060002_RS02680 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain V060002_RS02685 PF00114 Pilin (bacterial filament) V060002_RS02685 PF07963 Prokaryotic N-terminal methylation motif V060002_RS02690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain V060002_RS02690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain V060002_RS02695 PF01510 N-acetylmuramoyl-L-alanine amidase V060002_RS02700 PF00258 Flavodoxin V060002_RS02705 PF00589 Phage integrase family V060002_RS02705 PF02899 Phage integrase, N-terminal SAM-like domain V060002_RS02710 PF10411 Disulfide bond isomerase protein N-terminus V060002_RS02710 PF13098 Thioredoxin-like domain V060002_RS02715 PF01368 DHH family V060002_RS02715 PF02272 DHHA1 domain V060002_RS02715 PF17768 RecJ OB domain V060002_RS02720 PF02872 5'-nucleotidase, C-terminal domain V060002_RS02720 PF00149 Calcineurin-like phosphoesterase V060002_RS02730 PF00392 Bacterial regulatory proteins, gntR family V060002_RS02730 PF07729 FCD domain V060002_RS02735 PF00456 Transketolase, thiamine diphosphate binding domain V060002_RS02735 PF17831 Pyruvate dehydrogenase E1 component middle domain V060002_RS02740 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) V060002_RS02740 PF02817 e3 binding domain V060002_RS02740 PF00364 Biotin-requiring enzyme V060002_RS02745 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS02745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V060002_RS02755 PF01795 MraW methylase family V060002_RS02760 PF04999 Cell division protein FtsL V060002_RS02765 PF00905 Penicillin binding protein transpeptidase domain V060002_RS02765 PF03717 Penicillin-binding Protein dimerisation domain V060002_RS02770 PF02875 Mur ligase family, glutamate ligase domain V060002_RS02770 PF01225 Mur ligase family, catalytic domain V060002_RS02770 PF08245 Mur ligase middle domain V060002_RS02775 PF01225 Mur ligase family, catalytic domain V060002_RS02775 PF02875 Mur ligase family, glutamate ligase domain V060002_RS02775 PF08245 Mur ligase middle domain V060002_RS02780 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 V060002_RS02780 PF00953 Glycosyl transferase family 4 V060002_RS02785 PF08245 Mur ligase middle domain V060002_RS02785 PF02875 Mur ligase family, glutamate ligase domain V060002_RS02790 PF01098 Cell cycle protein V060002_RS02795 PF04101 Glycosyltransferase family 28 C-terminal domain V060002_RS02795 PF03033 Glycosyltransferase family 28 N-terminal domain V060002_RS02800 PF01225 Mur ligase family, catalytic domain V060002_RS02800 PF02875 Mur ligase family, glutamate ligase domain V060002_RS02800 PF08245 Mur ligase middle domain V060002_RS02805 PF03799 Cell division protein FtsQ V060002_RS02805 PF08478 POTRA domain, FtsQ-type V060002_RS02810 PF02491 SHS2 domain inserted in FTSA V060002_RS02815 PF00091 Tubulin/FtsZ family, GTPase domain V060002_RS02815 PF12327 FtsZ family, C-terminal domain V060002_RS02820 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase V060002_RS02830 PF02810 SEC-C motif V060002_RS02830 PF01043 SecA preprotein cross-linking domain V060002_RS02830 PF07516 SecA Wing and Scaffold domain V060002_RS02830 PF07517 SecA DEAD-like domain V060002_RS02835 PF00293 NUDIX domain V060002_RS02840 PF05173 Dihydrodipicolinate reductase, C-terminus V060002_RS02840 PF01113 Dihydrodipicolinate reductase, N-terminus V060002_RS02850 PF00117 Glutamine amidotransferase class-I V060002_RS02850 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain V060002_RS02855 PF02142 MGS-like domain V060002_RS02855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain V060002_RS02855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain V060002_RS02875 PF00005 ABC transporter V060002_RS02880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) V060002_RS02885 PF01925 Sulfite exporter TauE/SafE V060002_RS02890 PF03466 LysR substrate binding domain V060002_RS02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS02895 PF03458 UPF0126 domain V060002_RS02900 PF01497 Periplasmic binding protein V060002_RS02910 PF01048 Phosphorylase superfamily V060002_RS02920 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS02920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster V060002_RS02925 PF04898 Glutamate synthase central domain V060002_RS02925 PF01493 GXGXG motif V060002_RS02925 PF01645 Conserved region in glutamate synthase V060002_RS02925 PF00310 Glutamine amidotransferases class-II V060002_RS02930 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS02930 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster V060002_RS02935 PF00310 Glutamine amidotransferases class-II V060002_RS02935 PF04898 Glutamate synthase central domain V060002_RS02935 PF01645 Conserved region in glutamate synthase V060002_RS02935 PF01493 GXGXG motif V060002_RS02940 PF16199 Radical_SAM C-terminal domain V060002_RS02940 PF04055 Radical SAM superfamily V060002_RS02945 PF00563 EAL domain V060002_RS02945 PF01590 GAF domain V060002_RS02945 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS02945 PF00360 Phytochrome region V060002_RS02950 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS02950 PF00072 Response regulator receiver domain V060002_RS02950 PF00989 PAS fold V060002_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS02950 PF18415 Histidine kinase receptor ArcB trans-membrane domain V060002_RS02950 PF01627 Hpt domain V060002_RS02955 PF00486 Transcriptional regulatory protein, C terminal V060002_RS02955 PF00072 Response regulator receiver domain V060002_RS02965 PF03737 Aldolase/RraA V060002_RS02980 PF00696 Amino acid kinase family V060002_RS02980 PF00742 Homoserine dehydrogenase V060002_RS02980 PF03447 Homoserine dehydrogenase, NAD binding domain V060002_RS02980 PF13840 ACT domain V060002_RS02980 PF01842 ACT domain V060002_RS02985 PF00288 GHMP kinases N terminal domain V060002_RS02985 PF08544 GHMP kinases C terminal V060002_RS02990 PF00291 Pyridoxal-phosphate dependent enzyme V060002_RS02990 PF14821 Threonine synthase N terminus V060002_RS02995 PF01228 Glycine radical V060002_RS03000 PF01261 Xylose isomerase-like TIM barrel V060002_RS03005 PF03167 Uracil DNA glycosylase superfamily V060002_RS03020 PF01235 Sodium:alanine symporter family V060002_RS03025 PF03883 Peroxide stress protein YaaA V060002_RS03030 PF01026 TatD related DNase V060002_RS03035 PF01773 Na+ dependent nucleoside transporter N-terminus V060002_RS03035 PF07670 Nucleoside recognition V060002_RS03035 PF07662 Na+ dependent nucleoside transporter C-terminus V060002_RS03045 PF01791 DeoC/LacD family aldolase V060002_RS03050 PF02885 Glycosyl transferase family, helical bundle domain V060002_RS03050 PF00591 Glycosyl transferase family, a/b domain V060002_RS03050 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain V060002_RS03055 PF01676 Metalloenzyme superfamily V060002_RS03060 PF01048 Phosphorylase superfamily V060002_RS03070 PF18429 Domain of unknown function (DUF5609) V060002_RS03085 PF18073 Rubredoxin metal binding domain V060002_RS03090 PF00679 Elongation factor G C-terminus V060002_RS03090 PF14492 Elongation Factor G, domain II V060002_RS03090 PF03764 Elongation factor G, domain IV V060002_RS03090 PF00009 Elongation factor Tu GTP binding domain V060002_RS03090 PF03144 Elongation factor Tu domain 2 V060002_RS03095 PF00501 AMP-binding enzyme V060002_RS03100 PF00072 Response regulator receiver domain V060002_RS03110 PF00703 Glycosyl hydrolases family 2 V060002_RS03110 PF16353 Domain of unknown function(DUF4981) V060002_RS03110 PF02929 Beta galactosidase small chain V060002_RS03110 PF02836 Glycosyl hydrolases family 2, TIM barrel domain V060002_RS03110 PF02837 Glycosyl hydrolases family 2, sugar binding domain V060002_RS03115 PF00356 Bacterial regulatory proteins, lacI family V060002_RS03120 PF01588 Putative tRNA binding domain V060002_RS03130 PF01544 CorA-like Mg2+ transporter protein V060002_RS03135 PF08443 RimK-like ATP-grasp domain V060002_RS03135 PF18030 RimK PreATP-grasp domain V060002_RS03135 PF02080 TrkA-C domain V060002_RS03140 PF00583 Acetyltransferase (GNAT) family V060002_RS03150 PF14602 Hexapeptide repeat of succinyl-transferase V060002_RS03150 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle V060002_RS03155 PF07130 YebG protein V060002_RS03170 PF17946 RecC C-terminal domain V060002_RS03175 PF12705 PD-(D/E)XK nuclease superfamily V060002_RS03175 PF00580 UvrD/REP helicase N-terminal domain V060002_RS03175 PF13361 UvrD-like helicase C-terminal domain V060002_RS03180 PF13538 UvrD-like helicase C-terminal domain V060002_RS03190 PF00583 Acetyltransferase (GNAT) family V060002_RS03190 PF00696 Amino acid kinase family V060002_RS03200 PF06725 3D domain V060002_RS03200 PF03562 MltA specific insert domain V060002_RS03205 PF00899 ThiF family V060002_RS03210 PF02657 Fe-S metabolism associated domain V060002_RS03215 PF00266 Aminotransferase class-V V060002_RS03220 PF01965 DJ-1/PfpI family V060002_RS03225 PF08546 Ketopantoate reductase PanE/ApbA C terminal V060002_RS03225 PF02558 Ketopantoate reductase PanE/ApbA V060002_RS03230 PF03502 Nucleoside-specific channel-forming protein, Tsx V060002_RS03240 PF04545 Sigma-70, region 4 V060002_RS03240 PF04542 Sigma-70 region 2 V060002_RS03250 PF07690 Major Facilitator Superfamily V060002_RS03260 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD V060002_RS03270 PF05175 Methyltransferase small domain V060002_RS03275 PF01722 BolA-like protein V060002_RS03280 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) V060002_RS03280 PF11973 NQRA C-terminal domain V060002_RS03285 PF03116 NQR2, RnfD, RnfE family V060002_RS03290 PF04205 FMN-binding domain V060002_RS03295 PF02508 Rnf-Nqr subunit, membrane protein V060002_RS03300 PF02508 Rnf-Nqr subunit, membrane protein V060002_RS03305 PF00970 Oxidoreductase FAD-binding domain V060002_RS03305 PF00111 2Fe-2S iron-sulfur cluster binding domain V060002_RS03305 PF00175 Oxidoreductase NAD-binding domain V060002_RS03310 PF02424 ApbE family V060002_RS03320 PF11798 IMS family HHH motif V060002_RS03320 PF00817 impB/mucB/samB family V060002_RS03335 PF00209 Sodium:neurotransmitter symporter family V060002_RS03345 PF08443 RimK-like ATP-grasp domain V060002_RS03345 PF18030 RimK PreATP-grasp domain V060002_RS03350 PF08443 RimK-like ATP-grasp domain V060002_RS03350 PF18030 RimK PreATP-grasp domain V060002_RS03355 PF07687 Peptidase dimerisation domain V060002_RS03355 PF01546 Peptidase family M20/M25/M40 V060002_RS03360 PF00860 Permease family V060002_RS03365 PF00156 Phosphoribosyl transferase domain V060002_RS03370 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) V060002_RS03375 PF07417 Sigma factor-binding transcriptional regulator Crl V060002_RS03380 PF00696 Amino acid kinase family V060002_RS03380 PF01472 PUA domain V060002_RS03385 PF00171 Aldehyde dehydrogenase family V060002_RS03390 PF03477 ATP cone domain V060002_RS03395 PF01872 RibD C-terminal domain V060002_RS03395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region V060002_RS03400 PF00677 Lumazine binding domain V060002_RS03405 PF00925 GTP cyclohydrolase II V060002_RS03405 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase V060002_RS03410 PF00885 6,7-dimethyl-8-ribityllumazine synthase V060002_RS03415 PF01029 NusB family V060002_RS03420 PF02769 AIR synthase related protein, C-terminal domain V060002_RS03420 PF00586 AIR synthase related protein, N-terminal domain V060002_RS03425 PF04608 Phosphatidylglycerophosphatase A V060002_RS03430 PF11944 Protein of unknown function (DUF3461) V060002_RS03440 PF01909 Nucleotidyltransferase domain V060002_RS03440 PF01966 HD domain V060002_RS03440 PF08335 GlnD PII-uridylyltransferase V060002_RS03445 PF00557 Metallopeptidase family M24 V060002_RS03450 PF00318 Ribosomal protein S2 V060002_RS03455 PF00889 Elongation factor TS V060002_RS03460 PF00696 Amino acid kinase family V060002_RS03465 PF01765 Ribosome recycling factor V060002_RS03470 PF01255 Putative undecaprenyl diphosphate synthase V060002_RS03480 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase V060002_RS03480 PF13288 DXP reductoisomerase C-terminal domain V060002_RS03480 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain V060002_RS03485 PF17820 PDZ domain V060002_RS03485 PF02163 Peptidase family M50 V060002_RS03490 PF07244 Surface antigen variable number repeat V060002_RS03490 PF01103 Surface antigen V060002_RS03495 PF03938 Outer membrane protein (OmpH-like) V060002_RS03500 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD V060002_RS03500 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS03505 PF07977 FabA-like domain V060002_RS03510 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS03510 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 V060002_RS03515 PF02684 Lipid-A-disaccharide synthetase V060002_RS03520 PF01351 Ribonuclease HII V060002_RS03525 PF01336 OB-fold nucleic acid binding domain V060002_RS03525 PF02811 PHP domain V060002_RS03525 PF07733 Bacterial DNA polymerase III alpha NTPase domain V060002_RS03525 PF17657 Bacterial DNA polymerase III alpha subunit finger domain V060002_RS03525 PF14579 Helix-hairpin-helix motif V060002_RS03530 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit V060002_RS03535 PF01171 PP-loop family V060002_RS03535 PF11734 TilS substrate C-terminal domain V060002_RS03535 PF09179 TilS substrate binding domain V060002_RS03540 PF00034 Cytochrome c V060002_RS03545 PF05870 Phenolic acid decarboxylase (PAD) V060002_RS03550 PF00543 Nitrogen regulatory protein P-II V060002_RS03555 PF03372 Endonuclease/Exonuclease/phosphatase family V060002_RS03560 PF01464 Transglycosylase SLT domain V060002_RS03560 PF01476 LysM domain V060002_RS03565 PF00753 Metallo-beta-lactamase superfamily V060002_RS03565 PF16123 Hydroxyacylglutathione hydrolase C-terminus V060002_RS03570 PF08241 Methyltransferase domain V060002_RS03575 PF00075 RNase H V060002_RS03580 PF00929 Exonuclease V060002_RS03590 PF02770 Acyl-CoA dehydrogenase, middle domain V060002_RS03590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V060002_RS03590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V060002_RS03590 PF09317 Domain of unknown function (DUF1974) V060002_RS03595 PF13580 SIS domain V060002_RS03600 PF13230 Glutamine amidotransferases class-II V060002_RS03605 PF00551 Formyl transferase V060002_RS03610 PF00586 AIR synthase related protein, N-terminal domain V060002_RS03610 PF02769 AIR synthase related protein, C-terminal domain V060002_RS03620 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS03625 PF00849 RNA pseudouridylate synthase V060002_RS03625 PF01479 S4 domain V060002_RS03630 PF01713 Smr domain V060002_RS03645 PF01963 TraB family V060002_RS03650 PF00728 Glycosyl hydrolase family 20, catalytic domain V060002_RS03650 PF03173 Putative carbohydrate binding domain V060002_RS03650 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain V060002_RS03650 PF02838 Glycosyl hydrolase family 20, domain 2 V060002_RS03660 PF00403 Heavy-metal-associated domain V060002_RS03665 PF00749 tRNA synthetases class I (E and Q), catalytic domain V060002_RS03670 PF00691 OmpA family V060002_RS03670 PF01389 OmpA-like transmembrane domain V060002_RS03680 PF07715 TonB-dependent Receptor Plug Domain V060002_RS03685 PF04954 Siderophore-interacting protein V060002_RS03685 PF08021 Siderophore-interacting FAD-binding domain V060002_RS03690 PF00550 Phosphopantetheine attachment site V060002_RS03690 PF08242 Methyltransferase domain V060002_RS03690 PF00501 AMP-binding enzyme V060002_RS03690 PF00668 Condensation domain V060002_RS03725 PF01584 CheW-like domain V060002_RS03725 PF00072 Response regulator receiver domain V060002_RS03730 PF03705 CheR methyltransferase, all-alpha domain V060002_RS03730 PF01739 CheR methyltransferase, SAM binding domain V060002_RS03735 PF00460 Flagella basal body rod protein V060002_RS03740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V060002_RS03740 PF00460 Flagella basal body rod protein V060002_RS03745 PF03963 Flagellar hook capping protein - N-terminal region V060002_RS03745 PF13860 FlgD Ig-like domain V060002_RS03745 PF13861 FlgD Tudor-like domain V060002_RS03750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V060002_RS03750 PF00460 Flagella basal body rod protein V060002_RS03750 PF07559 Flagellar basal body protein FlaE V060002_RS03755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V060002_RS03755 PF00460 Flagella basal body rod protein V060002_RS03760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V060002_RS03760 PF00460 Flagella basal body rod protein V060002_RS03765 PF02107 Flagellar L-ring protein V060002_RS03770 PF02119 Flagellar P-ring protein V060002_RS03775 PF10135 Rod binding protein V060002_RS03775 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase V060002_RS03780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal V060002_RS03780 PF07196 Flagellin hook IN motif V060002_RS03790 PF00700 Bacterial flagellin C-terminal helical region V060002_RS03790 PF07196 Flagellin hook IN motif V060002_RS03790 PF00669 Bacterial flagellin N-terminal helical region V060002_RS03795 PF00669 Bacterial flagellin N-terminal helical region V060002_RS03795 PF07196 Flagellin hook IN motif V060002_RS03795 PF00700 Bacterial flagellin C-terminal helical region V060002_RS03880 PF06071 Protein of unknown function (DUF933) V060002_RS03880 PF01926 50S ribosome-binding GTPase V060002_RS03885 PF01195 Peptidyl-tRNA hydrolase V060002_RS03890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase V060002_RS03890 PF14572 Phosphoribosyl synthetase-associated domain V060002_RS03895 PF00288 GHMP kinases N terminal domain V060002_RS03895 PF08544 GHMP kinases C terminal V060002_RS03900 PF03550 Outer membrane lipoprotein LolB V060002_RS03905 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain V060002_RS03905 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain V060002_RS03905 PF01488 Shikimate / quinate 5-dehydrogenase V060002_RS03910 PF03462 PCRF domain V060002_RS03910 PF00472 RF-1 domain V060002_RS03915 PF13847 Methyltransferase domain V060002_RS03915 PF17827 PrmC N-terminal domain V060002_RS03920 PF04247 Invasion gene expression up-regulator, SirB V060002_RS03925 PF13369 Transglutaminase-like superfamily V060002_RS03930 PF00793 DAHP synthetase I family V060002_RS03935 PF00149 Calcineurin-like phosphoesterase V060002_RS03935 PF02872 5'-nucleotidase, C-terminal domain V060002_RS03940 PF04073 Aminoacyl-tRNA editing domain V060002_RS03945 PF00860 Permease family V060002_RS03960 PF03358 NADPH-dependent FMN reductase V060002_RS03965 PF03960 ArsC family V060002_RS03970 PF13181 Tetratricopeptide repeat V060002_RS03970 PF01435 Peptidase family M48 V060002_RS03980 PF01594 AI-2E family transporter V060002_RS03985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS03985 PF02743 Cache domain V060002_RS03985 PF00672 HAMP domain V060002_RS03990 PF00578 AhpC/TSA family V060002_RS04000 PF00701 Dihydrodipicolinate synthetase family V060002_RS04005 PF06804 NlpB/DapX lipoprotein V060002_RS04015 PF02557 D-alanyl-D-alanine carboxypeptidase V060002_RS04020 PF07687 Peptidase dimerisation domain V060002_RS04020 PF01546 Peptidase family M20/M25/M40 V060002_RS04025 PF03960 ArsC family V060002_RS04040 PF11143 Protein of unknown function (DUF2919) V060002_RS04045 PF04261 Dyp-type peroxidase family V060002_RS04050 PF00700 Bacterial flagellin C-terminal helical region V060002_RS04050 PF07196 Flagellin hook IN motif V060002_RS04050 PF00669 Bacterial flagellin N-terminal helical region V060002_RS04055 PF00669 Bacterial flagellin N-terminal helical region V060002_RS04055 PF00700 Bacterial flagellin C-terminal helical region V060002_RS04055 PF07196 Flagellin hook IN motif V060002_RS04060 PF07196 Flagellin hook IN motif V060002_RS04060 PF00669 Bacterial flagellin N-terminal helical region V060002_RS04060 PF00700 Bacterial flagellin C-terminal helical region V060002_RS04065 PF03646 FlaG protein V060002_RS04070 PF07196 Flagellin hook IN motif V060002_RS04070 PF07195 Flagellar hook-associated protein 2 C-terminus V060002_RS04070 PF02465 Flagellar hook-associated protein 2 N-terminus V060002_RS04080 PF02561 Flagellar protein FliS V060002_RS04085 PF00158 Sigma-54 interaction domain V060002_RS04085 PF02954 Bacterial regulatory protein, Fis family V060002_RS04085 PF06490 Flagellar regulatory protein FleQ V060002_RS04090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS04090 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS04090 PF13188 PAS domain V060002_RS04095 PF02954 Bacterial regulatory protein, Fis family V060002_RS04095 PF00158 Sigma-54 interaction domain V060002_RS04095 PF00072 Response regulator receiver domain V060002_RS04100 PF02049 Flagellar hook-basal body complex protein FliE V060002_RS04105 PF08345 Flagellar M-ring protein C-terminal V060002_RS04105 PF01514 Secretory protein of YscJ/FliF family V060002_RS04110 PF01706 FliG C-terminal domain V060002_RS04110 PF14842 FliG N-terminal domain V060002_RS04110 PF14841 FliG middle domain V060002_RS04115 PF02108 Flagellar assembly protein FliH V060002_RS04120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V060002_RS04120 PF18269 T3SS EscN ATPase C-terminal domain V060002_RS04140 PF03748 Flagellar basal body-associated protein FliL V060002_RS04145 PF02154 Flagellar motor switch protein FliM V060002_RS04145 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term V060002_RS04150 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term V060002_RS04155 PF04347 Flagellar biosynthesis protein, FliO V060002_RS04160 PF00813 FliP family V060002_RS04165 PF01313 Bacterial export proteins, family 3 V060002_RS04170 PF01311 Bacterial export proteins, family 1 V060002_RS04175 PF01312 FlhB HrpN YscU SpaS Family V060002_RS04180 PF01713 Smr domain V060002_RS04185 PF05175 Methyltransferase small domain V060002_RS04195 PF01264 Chorismate synthase V060002_RS04200 PF03458 UPF0126 domain V060002_RS04205 PF04315 Elongation factor P hydroxylase V060002_RS04210 PF08891 YfcL protein V060002_RS04215 PF03358 NADPH-dependent FMN reductase V060002_RS04220 PF01266 FAD dependent oxidoreductase V060002_RS04220 PF05430 S-adenosyl-L-methionine-dependent methyltransferase V060002_RS04225 PF00109 Beta-ketoacyl synthase, N-terminal domain V060002_RS04225 PF02801 Beta-ketoacyl synthase, C-terminal domain V060002_RS04230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V060002_RS04230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V060002_RS04230 PF11890 Domain of unknown function (DUF3410) V060002_RS04235 PF02774 Semialdehyde dehydrogenase, dimerisation domain V060002_RS04235 PF01118 Semialdehyde dehydrogenase, NAD binding domain V060002_RS04240 PF01475 Ferric uptake regulator family V060002_RS04250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS04250 PF03466 LysR substrate binding domain V060002_RS04255 PF03788 LrgA family V060002_RS04260 PF04172 LrgB-like family V060002_RS04265 PF00258 Flavodoxin V060002_RS04275 PF12697 Alpha/beta hydrolase family V060002_RS04280 PF17206 SeqA protein N-terminal domain V060002_RS04280 PF03925 SeqA protein C-terminal domain V060002_RS04285 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I V060002_RS04285 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain V060002_RS04285 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III V060002_RS04285 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II V060002_RS04295 PF01784 NIF3 (NGG1p interacting factor 3) V060002_RS04300 PF00285 Citrate synthase, C-terminal domain V060002_RS04305 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit V060002_RS04310 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit V060002_RS04315 PF00890 FAD binding domain V060002_RS04315 PF02910 Fumarate reductase flavoprotein C-term V060002_RS04320 PF13085 2Fe-2S iron-sulfur cluster binding domain V060002_RS04325 PF02779 Transketolase, pyrimidine binding domain V060002_RS04325 PF16078 2-oxoglutarate dehydrogenase N-terminus V060002_RS04325 PF16870 2-oxoglutarate dehydrogenase C-terminal V060002_RS04325 PF00676 Dehydrogenase E1 component V060002_RS04330 PF02817 e3 binding domain V060002_RS04330 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) V060002_RS04330 PF00364 Biotin-requiring enzyme V060002_RS04335 PF08442 ATP-grasp domain V060002_RS04335 PF00549 CoA-ligase V060002_RS04340 PF02629 CoA binding domain V060002_RS04340 PF00549 CoA-ligase V060002_RS04345 PF00950 ABC 3 transport family V060002_RS04350 PF00005 ABC transporter V060002_RS04355 PF01297 Zinc-uptake complex component A periplasmic V060002_RS04360 PF12833 Helix-turn-helix domain V060002_RS04360 PF02311 AraC-like ligand binding domain V060002_RS04365 PF04023 FeoA domain V060002_RS04370 PF07670 Nucleoside recognition V060002_RS04370 PF02421 Ferrous iron transport protein B V060002_RS04370 PF07664 Ferrous iron transport protein B C terminus V060002_RS04385 PF00750 tRNA synthetases class I (R) V060002_RS04385 PF05746 DALR anticodon binding domain V060002_RS04385 PF03485 Arginyl tRNA synthetase N terminal domain V060002_RS04395 PF05193 Peptidase M16 inactive domain V060002_RS04395 PF00675 Insulinase (Peptidase family M16) V060002_RS04400 PF00300 Histidine phosphatase superfamily (branch 1) V060002_RS04405 PF00771 FHIPEP family V060002_RS04410 PF00448 SRP54-type protein, GTPase domain V060002_RS04415 PF10609 NUBPL iron-transfer P-loop NTPase V060002_RS04420 PF04542 Sigma-70 region 2 V060002_RS04420 PF04539 Sigma-70 region 3 V060002_RS04420 PF04545 Sigma-70, region 4 V060002_RS04425 PF00072 Response regulator receiver domain V060002_RS04430 PF04344 Chemotaxis phosphatase, CheZ V060002_RS04435 PF01627 Hpt domain V060002_RS04435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS04435 PF00072 Response regulator receiver domain V060002_RS04435 PF02895 Signal transducing histidine kinase, homodimeric domain V060002_RS04435 PF01584 CheW-like domain V060002_RS04440 PF01339 CheB methylesterase V060002_RS04440 PF00072 Response regulator receiver domain V060002_RS04445 PF13614 AAA domain V060002_RS04455 PF01584 CheW-like domain V060002_RS04465 PF00005 ABC transporter V060002_RS04470 PF03379 CcmB protein V060002_RS04475 PF01578 Cytochrome C assembly protein V060002_RS04480 PF04995 Heme exporter protein D (CcmD) V060002_RS04485 PF03100 CcmE V060002_RS04490 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal V060002_RS04490 PF01578 Cytochrome C assembly protein V060002_RS04495 PF08534 Redoxin V060002_RS04500 PF03918 Cytochrome C biogenesis protein V060002_RS04510 PF04333 MlaA lipoprotein V060002_RS04525 PF02777 Iron/manganese superoxide dismutases, C-terminal domain V060002_RS04525 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain V060002_RS04530 PF00462 Glutaredoxin V060002_RS04535 PF01131 DNA topoisomerase V060002_RS04535 PF01751 Toprim domain V060002_RS04540 PF00850 Histone deacetylase domain V060002_RS04555 PF00884 Sulfatase V060002_RS04555 PF11893 Domain of unknown function (DUF3413) V060002_RS04560 PF07208 Protein of unknown function (DUF1414) V060002_RS04565 PF04245 37-kD nucleoid-associated bacterial protein V060002_RS04575 PF03553 Na+/H+ antiporter family V060002_RS04580 PF02774 Semialdehyde dehydrogenase, dimerisation domain V060002_RS04580 PF01118 Semialdehyde dehydrogenase, NAD binding domain V060002_RS04585 PF01914 MarC family integral membrane protein V060002_RS04590 PF00465 Iron-containing alcohol dehydrogenase V060002_RS04590 PF00171 Aldehyde dehydrogenase family V060002_RS04605 PF01740 STAS domain V060002_RS04605 PF00916 Sulfate permease family V060002_RS04610 PF12111 Polyribonucleotide phosphorylase C terminal V060002_RS04610 PF10150 Ribonuclease E/G family V060002_RS04610 PF00575 S1 RNA binding domain V060002_RS04625 PF01479 S4 domain V060002_RS04625 PF00849 RNA pseudouridylate synthase V060002_RS04630 PF02545 Maf-like protein V060002_RS04635 PF02620 Large ribosomal RNA subunit accumulation protein YceD V060002_RS04640 PF01783 Ribosomal L32p protein family V060002_RS04645 PF02504 Fatty acid synthesis protein V060002_RS04650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III V060002_RS04650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal V060002_RS04655 PF00698 Acyl transferase domain V060002_RS04665 PF00550 Phosphopantetheine attachment site V060002_RS04670 PF00109 Beta-ketoacyl synthase, N-terminal domain V060002_RS04670 PF02801 Beta-ketoacyl synthase, C-terminal domain V060002_RS04675 PF01063 Amino-transferase class IV V060002_RS04680 PF02618 YceG-like family V060002_RS04685 PF02223 Thymidylate kinase V060002_RS04690 PF09115 DNA polymerase III, delta subunit, C terminal V060002_RS04695 PF01026 TatD related DNase V060002_RS04700 PF02378 Phosphotransferase system, EIIC V060002_RS04700 PF00367 phosphotransferase system, EIIB V060002_RS04710 PF00209 Sodium:neurotransmitter symporter family V060002_RS04725 PF01734 Patatin-like phospholipase V060002_RS04730 PF02887 Pyruvate kinase, alpha/beta domain V060002_RS04730 PF00224 Pyruvate kinase, barrel domain V060002_RS04735 PF00480 ROK family V060002_RS04740 PF01584 CheW-like domain V060002_RS04740 PF00072 Response regulator receiver domain V060002_RS04755 PF13847 Methyltransferase domain V060002_RS04775 PF01263 Aldose 1-epimerase V060002_RS04780 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V060002_RS04780 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V060002_RS04785 PF01641 SelR domain V060002_RS04795 PF07023 Protein of unknown function (DUF1315) V060002_RS04800 PF00710 Asparaginase, N-terminal V060002_RS04800 PF17763 Glutaminase/Asparaginase C-terminal domain V060002_RS04805 PF01343 Peptidase family S49 V060002_RS04810 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS04810 PF00724 NADH:flavin oxidoreductase / NADH oxidase family V060002_RS04815 PF01842 ACT domain V060002_RS04815 PF00551 Formyl transferase V060002_RS04830 PF13307 Helicase C-terminal domain V060002_RS04830 PF04851 Type III restriction enzyme, res subunit V060002_RS04835 PF00814 Glycoprotease family V060002_RS04850 PF00561 alpha/beta hydrolase fold V060002_RS04860 PF01612 3'-5' exonuclease V060002_RS04860 PF00570 HRDC domain V060002_RS04880 PF01966 HD domain V060002_RS04880 PF13286 Phosphohydrolase-associated domain V060002_RS04890 PF00155 Aminotransferase class I and II V060002_RS04895 PF00425 chorismate binding enzyme V060002_RS04900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V060002_RS04900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V060002_RS04900 PF16582 Middle domain of thiamine pyrophosphate V060002_RS04905 PF12697 Alpha/beta hydrolase family V060002_RS04910 PF00378 Enoyl-CoA hydratase/isomerase V060002_RS04915 PF13378 Enolase C-terminal domain-like V060002_RS04920 PF13193 AMP-binding enzyme C-terminal domain V060002_RS04920 PF00501 AMP-binding enzyme V060002_RS04925 PF03594 Benzoate membrane transport protein V060002_RS04930 PF07883 Cupin domain V060002_RS04930 PF01381 Helix-turn-helix V060002_RS04935 PF00672 HAMP domain V060002_RS04935 PF12729 Four helix bundle sensory module for signal transduction V060002_RS04935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS04940 PF07690 Major Facilitator Superfamily V060002_RS04960 PF04170 NlpE N-terminal domain V060002_RS04965 PF03776 Septum formation topological specificity factor MinE V060002_RS04970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain V060002_RS04975 PF03775 Septum formation inhibitor MinC, C-terminal domain V060002_RS04975 PF05209 Septum formation inhibitor MinC, N-terminal domain V060002_RS04980 PF05166 YcgL domain V060002_RS04985 PF13406 Transglycosylase SLT domain V060002_RS04990 PF03466 LysR substrate binding domain V060002_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS04995 PF07670 Nucleoside recognition V060002_RS04995 PF07662 Na+ dependent nucleoside transporter C-terminus V060002_RS04995 PF01773 Na+ dependent nucleoside transporter N-terminus V060002_RS05000 PF00704 Glycosyl hydrolases family 18 V060002_RS05005 PF03264 NapC/NirT cytochrome c family, N-terminal region V060002_RS05010 PF01568 Molydopterin dinucleotide binding domain V060002_RS05010 PF00384 Molybdopterin oxidoreductase V060002_RS05010 PF18364 Molybdopterin oxidoreductase N-terminal domain V060002_RS05025 PF03466 LysR substrate binding domain V060002_RS05025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS05030 PF01494 FAD binding domain V060002_RS05035 PF02668 Taurine catabolism dioxygenase TauD, TfdA family V060002_RS05040 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain V060002_RS05040 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain V060002_RS05090 PF00563 EAL domain V060002_RS05090 PF13188 PAS domain V060002_RS05090 PF03707 Bacterial signalling protein N terminal repeat V060002_RS05090 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS05105 PF02696 Uncharacterized ACR, YdiU/UPF0061 family V060002_RS05110 PF03480 Bacterial extracellular solute-binding protein, family 7 V060002_RS05115 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component V060002_RS05120 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component V060002_RS05125 PF00072 Response regulator receiver domain V060002_RS05125 PF00158 Sigma-54 interaction domain V060002_RS05125 PF02954 Bacterial regulatory protein, Fis family V060002_RS05130 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS05130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS05130 PF02743 Cache domain V060002_RS05140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V060002_RS05140 PF05698 Bacterial trigger factor protein (TF) C-terminus V060002_RS05140 PF05697 Bacterial trigger factor protein (TF) V060002_RS05145 PF00574 Clp protease V060002_RS05150 PF07724 AAA domain (Cdc48 subfamily) V060002_RS05150 PF10431 C-terminal, D2-small domain, of ClpB protein V060002_RS05150 PF06689 ClpX C4-type zinc finger V060002_RS05155 PF05362 Lon protease (S16) C-terminal proteolytic domain V060002_RS05155 PF00004 ATPase family associated with various cellular activities (AAA) V060002_RS05155 PF02190 ATP-dependent protease La (LON) substrate-binding domain V060002_RS05160 PF00216 Bacterial DNA-binding protein V060002_RS05165 PF13145 PPIC-type PPIASE domain V060002_RS05175 PF02224 Cytidylate kinase V060002_RS05185 PF00216 Bacterial DNA-binding protein V060002_RS05190 PF06305 Lipopolysaccharide assembly protein A domain V060002_RS05195 PF18073 Rubredoxin metal binding domain V060002_RS05200 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family V060002_RS05205 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) V060002_RS05215 PF03466 LysR substrate binding domain V060002_RS05215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS05225 PF05222 Alanine dehydrogenase/PNT, N-terminal domain V060002_RS05225 PF01262 Alanine dehydrogenase/PNT, C-terminal domain V060002_RS05230 PF01037 Lrp/AsnC ligand binding domain V060002_RS05235 PF01580 FtsK/SpoIIIE family V060002_RS05235 PF09397 Ftsk gamma domain V060002_RS05235 PF17854 FtsK alpha domain V060002_RS05235 PF13491 4TM region of DNA translocase FtsK/SpoIIIE V060002_RS05240 PF02600 Disulfide bond formation protein DsbB V060002_RS05245 PF06450 Bacterial Na+/H+ antiporter B (NhaB) V060002_RS05250 PF00392 Bacterial regulatory proteins, gntR family V060002_RS05250 PF07840 FadR C-terminal domain V060002_RS05260 PF00672 HAMP domain V060002_RS05260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS05265 PF01230 HIT domain V060002_RS05280 PF13036 Peptidoglycan-synthase activator LpoB V060002_RS05280 PF08139 Prokaryotic membrane lipoprotein lipid attachment site V060002_RS05290 PF05728 Uncharacterised protein family (UPF0227) V060002_RS05295 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS05305 PF16458 Beta-prism lectin V060002_RS05305 PF12563 Hemolytic toxin N terminal V060002_RS05305 PF07968 Leukocidin/Hemolysin toxin family V060002_RS05315 PF17757 UvrB interaction domain V060002_RS05315 PF00270 DEAD/DEAH box helicase V060002_RS05315 PF03461 TRCF domain V060002_RS05315 PF00271 Helicase conserved C-terminal domain V060002_RS05315 PF02559 CarD-like/TRCF domain V060002_RS05325 PF12704 MacB-like periplasmic core domain V060002_RS05325 PF02687 FtsX-like permease family V060002_RS05330 PF00005 ABC transporter V060002_RS05335 PF12704 MacB-like periplasmic core domain V060002_RS05335 PF02687 FtsX-like permease family V060002_RS05345 PF13567 Domain of unknown function (DUF4131) V060002_RS05345 PF00753 Metallo-beta-lactamase superfamily V060002_RS05345 PF03772 Competence protein V060002_RS05350 PF00664 ABC transporter transmembrane region V060002_RS05350 PF00005 ABC transporter V060002_RS05355 PF02606 Tetraacyldisaccharide-1-P 4'-kinase V060002_RS05360 PF03966 Trm112p-like protein V060002_RS05365 PF02348 Cytidylyltransferase V060002_RS05370 PF04293 SpoVR like protein V060002_RS05375 PF04285 Protein of unknown function (DUF444) V060002_RS05380 PF06798 PrkA serine protein kinase C-terminal domain V060002_RS05380 PF08298 PrkA AAA domain V060002_RS05385 PF03887 YfbU domain V060002_RS05395 PF04055 Radical SAM superfamily V060002_RS05400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS05400 PF12729 Four helix bundle sensory module for signal transduction V060002_RS05400 PF00672 HAMP domain V060002_RS05410 PF01228 Glycine radical V060002_RS05410 PF02901 Pyruvate formate lyase-like V060002_RS05425 PF00005 ABC transporter V060002_RS05430 PF00497 Bacterial extracellular solute-binding proteins, family 3 V060002_RS05435 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS05440 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS05445 PF03372 Endonuclease/Exonuclease/phosphatase family V060002_RS05450 PF00672 HAMP domain V060002_RS05450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS05455 PF10689 Protein of unknown function (DUF2496) V060002_RS05460 PF07445 Primosomal replication protein priC V060002_RS05465 PF01925 Sulfite exporter TauE/SafE V060002_RS05470 PF06733 DEAD_2 V060002_RS05470 PF13307 Helicase C-terminal domain V060002_RS05475 PF13609 Gram-negative porin V060002_RS05480 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) V060002_RS05485 PF02810 SEC-C motif V060002_RS05490 PF08668 HDOD domain V060002_RS05490 PF00563 EAL domain V060002_RS05495 PF00149 Calcineurin-like phosphoesterase V060002_RS05500 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD V060002_RS05505 PF01406 tRNA synthetases class I (C) catalytic domain V060002_RS05505 PF09190 DALR domain V060002_RS05510 PF02075 Crossover junction endodeoxyribonuclease RuvC V060002_RS05515 PF07499 RuvA, C-terminal domain V060002_RS05515 PF01330 RuvA N terminal domain V060002_RS05520 PF05496 Holliday junction DNA helicase RuvB P-loop domain V060002_RS05520 PF05491 RuvB C-terminal winged helix domain V060002_RS05520 PF17864 RuvB AAA lid domain V060002_RS05525 PF01654 Cytochrome bd terminal oxidase subunit I V060002_RS05530 PF02322 Cytochrome bd terminal oxidase subunit II V060002_RS05535 PF08173 Membrane bound YbgT-like protein V060002_RS05540 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) V060002_RS05545 PF03061 Thioesterase superfamily V060002_RS05550 PF01618 MotA/TolQ/ExbB proton channel family V060002_RS05555 PF02472 Biopolymer transport protein ExbD/TolR V060002_RS05565 PF04052 TolB amino-terminal domain V060002_RS05565 PF07676 WD40-like Beta Propeller Repeat V060002_RS05570 PF00691 OmpA family V060002_RS05580 PF02445 Quinolinate synthetase A protein V060002_RS05590 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS05590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS05590 PF00072 Response regulator receiver domain V060002_RS05590 PF09308 LuxQ, periplasmic V060002_RS05595 PF06610 L-alanine exporter V060002_RS05600 PF01238 Phosphomannose isomerase type I V060002_RS05605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V060002_RS05605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V060002_RS05605 PF02378 Phosphotransferase system, EIIC V060002_RS05610 PF12833 Helix-turn-helix domain V060002_RS05620 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V060002_RS05640 PF00171 Aldehyde dehydrogenase family V060002_RS05645 PF00158 Sigma-54 interaction domain V060002_RS05645 PF01590 GAF domain V060002_RS05645 PF02954 Bacterial regulatory protein, Fis family V060002_RS05650 PF09905 DNA-binding protein VF530 V060002_RS05660 PF03441 FAD binding domain of DNA photolyase V060002_RS05660 PF00875 DNA photolyase V060002_RS05740 PF00005 ABC transporter V060002_RS05805 PF01556 DnaJ C terminal domain V060002_RS05805 PF00684 DnaJ central domain V060002_RS05805 PF00226 DnaJ domain V060002_RS05820 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS05820 PF00563 EAL domain V060002_RS05820 PF00498 FHA domain V060002_RS05825 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase V060002_RS05825 PF07055 Enoyl reductase FAD binding domain V060002_RS05825 PF12241 Trans-2-enoyl-CoA reductase catalytic region V060002_RS05830 PF13472 GDSL-like Lipase/Acylhydrolase family V060002_RS05835 PF00005 ABC transporter V060002_RS05845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain V060002_RS05845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain V060002_RS05855 PF02626 Carboxyltransferase domain, subdomain A and B V060002_RS05865 PF03746 LamB/YcsF family V060002_RS05875 PF16363 GDP-mannose 4,6 dehydratase V060002_RS05880 PF12729 Four helix bundle sensory module for signal transduction V060002_RS05880 PF00672 HAMP domain V060002_RS05880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS05885 PF03222 Tryptophan/tyrosine permease family V060002_RS05895 PF04336 Acyl carrier protein phosphodiesterase V060002_RS05900 PF00271 Helicase conserved C-terminal domain V060002_RS05900 PF00270 DEAD/DEAH box helicase V060002_RS05905 PF00440 Bacterial regulatory proteins, tetR family V060002_RS05905 PF08361 MAATS-type transcriptional repressor, C-terminal region V060002_RS05910 PF00034 Cytochrome c V060002_RS05915 PF01212 Beta-eliminating lyase V060002_RS05920 PF00293 NUDIX domain V060002_RS05925 PF12592 Protein of unknown function (DUF3763) V060002_RS05925 PF17868 AAA lid domain V060002_RS05925 PF07728 AAA domain (dynein-related subfamily) V060002_RS05930 PF05762 VWA domain containing CoxE-like protein V060002_RS05940 PF00005 ABC transporter V060002_RS05945 PF00497 Bacterial extracellular solute-binding proteins, family 3 V060002_RS05950 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS05955 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS05960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS05960 PF03466 LysR substrate binding domain V060002_RS05985 PF07690 Major Facilitator Superfamily V060002_RS05990 PF00085 Thioredoxin V060002_RS05995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal V060002_RS05995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III V060002_RS06000 PF13183 4Fe-4S dicluster domain V060002_RS06000 PF02754 Cysteine-rich domain V060002_RS06005 PF00890 FAD binding domain V060002_RS06010 PF04324 BFD-like [2Fe-2S] binding domain V060002_RS06010 PF01266 FAD dependent oxidoreductase V060002_RS06015 PF00230 Major intrinsic protein V060002_RS06020 PF02782 FGGY family of carbohydrate kinases, C-terminal domain V060002_RS06020 PF00370 FGGY family of carbohydrate kinases, N-terminal domain V060002_RS06035 PF04363 Protein of unknown function (DUF496) V060002_RS06045 PF04337 Protein of unknown function, DUF480 V060002_RS06050 PF01541 GIY-YIG catalytic domain V060002_RS06060 PF13407 Periplasmic binding protein domain V060002_RS06065 PF00072 Response regulator receiver domain V060002_RS06065 PF09308 LuxQ, periplasmic V060002_RS06065 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS06110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain V060002_RS06110 PF07685 CobB/CobQ-like glutamine amidotransferase domain V060002_RS06120 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS06125 PF03459 TOBE domain V060002_RS06125 PF00005 ABC transporter V060002_RS06150 PF00072 Response regulator receiver domain V060002_RS06150 PF13188 PAS domain V060002_RS06150 PF08448 PAS fold V060002_RS06150 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS06150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS06155 PF12805 FUSC-like inner membrane protein yccS V060002_RS06160 PF12462 DNA helicase IV / RNA helicase N terminal V060002_RS06160 PF00580 UvrD/REP helicase N-terminal domain V060002_RS06160 PF13361 UvrD-like helicase C-terminal domain V060002_RS06175 PF01219 Prokaryotic diacylglycerol kinase V060002_RS06180 PF00857 Isochorismatase family V060002_RS06185 PF02142 MGS-like domain V060002_RS06190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V060002_RS06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS06195 PF00072 Response regulator receiver domain V060002_RS06195 PF01627 Hpt domain V060002_RS06195 PF00672 HAMP domain V060002_RS06195 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS06200 PF00224 Pyruvate kinase, barrel domain V060002_RS06200 PF02887 Pyruvate kinase, alpha/beta domain V060002_RS06205 PF07690 Major Facilitator Superfamily V060002_RS06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS06215 PF02743 Cache domain V060002_RS06215 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS06220 PF14532 Sigma-54 interaction domain V060002_RS06220 PF02954 Bacterial regulatory protein, Fis family V060002_RS06220 PF00072 Response regulator receiver domain V060002_RS06230 PF00465 Iron-containing alcohol dehydrogenase V060002_RS06235 PF06483 Chitinase C V060002_RS06235 PF00704 Glycosyl hydrolases family 18 V060002_RS06240 PF00483 Nucleotidyl transferase V060002_RS06245 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS06260 PF02355 Protein export membrane protein V060002_RS06260 PF07549 SecD/SecF GG Motif V060002_RS06260 PF13721 SecD export protein N-terminal TM region V060002_RS06265 PF02355 Protein export membrane protein V060002_RS06265 PF07549 SecD/SecF GG Motif V060002_RS06270 PF00106 short chain dehydrogenase V060002_RS06275 PF02803 Thiolase, C-terminal domain V060002_RS06275 PF00108 Thiolase, N-terminal domain V060002_RS06285 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus V060002_RS06290 PF08402 TOBE domain V060002_RS06290 PF00005 ABC transporter V060002_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS06305 PF07690 Major Facilitator Superfamily V060002_RS06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS06310 PF07730 Histidine kinase V060002_RS06310 PF05231 MASE1 V060002_RS06315 PF00072 Response regulator receiver domain V060002_RS06315 PF00196 Bacterial regulatory proteins, luxR family V060002_RS06320 PF01966 HD domain V060002_RS06330 PF03264 NapC/NirT cytochrome c family, N-terminal region V060002_RS06335 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) V060002_RS06340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V060002_RS06340 PF00384 Molybdopterin oxidoreductase V060002_RS06340 PF01568 Molydopterin dinucleotide binding domain V060002_RS06350 PF12838 4Fe-4S dicluster domain V060002_RS06350 PF13187 4Fe-4S dicluster domain V060002_RS06355 PF07730 Histidine kinase V060002_RS06355 PF00672 HAMP domain V060002_RS06355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS06355 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term V060002_RS06360 PF00196 Bacterial regulatory proteins, luxR family V060002_RS06360 PF00072 Response regulator receiver domain V060002_RS06365 PF00356 Bacterial regulatory proteins, lacI family V060002_RS06380 PF00474 Sodium:solute symporter family V060002_RS06385 PF03313 Serine dehydratase alpha chain V060002_RS06385 PF03315 Serine dehydratase beta chain V060002_RS06390 PF03606 C4-dicarboxylate anaerobic carrier V060002_RS06400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS06400 PF12729 Four helix bundle sensory module for signal transduction V060002_RS06400 PF00672 HAMP domain V060002_RS06405 PF13419 Haloacid dehalogenase-like hydrolase V060002_RS06410 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase V060002_RS06410 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V060002_RS06415 PF13488 Glycine zipper V060002_RS06415 PF00691 OmpA family V060002_RS06420 PF00672 HAMP domain V060002_RS06420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS06425 PF01266 FAD dependent oxidoreductase V060002_RS06425 PF16901 C-terminal domain of alpha-glycerophosphate oxidase V060002_RS06430 PF00294 pfkB family carbohydrate kinase V060002_RS06435 PF00251 Glycosyl hydrolases family 32 N-terminal domain V060002_RS06435 PF08244 Glycosyl hydrolases family 32 C terminal V060002_RS06440 PF00356 Bacterial regulatory proteins, lacI family V060002_RS06445 PF02378 Phosphotransferase system, EIIC V060002_RS06445 PF00367 phosphotransferase system, EIIB V060002_RS06490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V060002_RS06490 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS06505 PF04143 Sulphur transport V060002_RS06520 PF00873 AcrB/AcrD/AcrF family V060002_RS06535 PF03992 Antibiotic biosynthesis monooxygenase V060002_RS06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS06540 PF03466 LysR substrate binding domain V060002_RS06550 PF06942 GlpM protein V060002_RS06565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V060002_RS06565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V060002_RS06575 PF02810 SEC-C motif V060002_RS06575 PF01043 SecA preprotein cross-linking domain V060002_RS06575 PF07516 SecA Wing and Scaffold domain V060002_RS06575 PF07517 SecA DEAD-like domain V060002_RS06590 PF02780 Transketolase, C-terminal domain V060002_RS06590 PF02779 Transketolase, pyrimidine binding domain V060002_RS06590 PF00456 Transketolase, thiamine diphosphate binding domain V060002_RS06595 PF00923 Transaldolase/Fructose-6-phosphate aldolase V060002_RS06605 PF04198 Putative sugar-binding domain V060002_RS06610 PF00581 Rhodanese-like domain V060002_RS06620 PF00899 ThiF family V060002_RS06625 PF00994 Probable molybdopterin binding domain V060002_RS06625 PF03453 MoeA N-terminal region (domain I and II) V060002_RS06625 PF03454 MoeA C-terminal region (domain IV) V060002_RS06630 PF01227 GTP cyclohydrolase I V060002_RS06635 PF01641 SelR domain V060002_RS06635 PF01625 Peptide methionine sulfoxide reductase V060002_RS06640 PF01268 Formate--tetrahydrofolate ligase V060002_RS06645 PF01741 Large-conductance mechanosensitive channel, MscL V060002_RS06660 PF13419 Haloacid dehalogenase-like hydrolase V060002_RS06665 PF01272 Transcription elongation factor, GreA/GreB, C-term V060002_RS06665 PF14760 Rnk N-terminus V060002_RS06670 PF13419 Haloacid dehalogenase-like hydrolase V060002_RS06675 PF00202 Aminotransferase class-III V060002_RS06680 PF00266 Aminotransferase class-V V060002_RS06690 PF00005 ABC transporter V060002_RS06695 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS06700 PF07702 UTRA domain V060002_RS06700 PF00392 Bacterial regulatory proteins, gntR family V060002_RS06710 PF00854 POT family V060002_RS06735 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V060002_RS06740 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS06745 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS06745 PF12911 N-terminal TM domain of oligopeptide transport permease C V060002_RS06750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V060002_RS06750 PF00005 ABC transporter V060002_RS06755 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS06755 PF12804 MobA-like NTP transferase domain V060002_RS06755 PF03479 Plants and Prokaryotes Conserved (PCC) domain V060002_RS06770 PF00043 Glutathione S-transferase, C-terminal domain V060002_RS06770 PF02798 Glutathione S-transferase, N-terminal domain V060002_RS06795 PF03061 Thioesterase superfamily V060002_RS06805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V060002_RS06805 PF12793 Sugar transport-related sRNA regulator N-term V060002_RS06810 PF07715 TonB-dependent Receptor Plug Domain V060002_RS06810 PF00593 TonB dependent receptor V060002_RS06815 PF03466 LysR substrate binding domain V060002_RS06815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS06820 PF00583 Acetyltransferase (GNAT) family V060002_RS06820 PF13607 Succinyl-CoA ligase like flavodoxin domain V060002_RS06820 PF13380 CoA binding domain V060002_RS06830 PF01820 D-ala D-ala ligase N-terminus V060002_RS06830 PF07478 D-ala D-ala ligase C-terminus V060002_RS06840 PF01253 Translation initiation factor SUI1 V060002_RS06845 PF01376 Heat-labile enterotoxin beta chain V060002_RS06850 PF01375 Heat-labile enterotoxin alpha chain V060002_RS06855 PF05707 Zonular occludens toxin (Zot) V060002_RS06860 PF10734 Protein of unknown function (DUF2523) V060002_RS06865 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII V060002_RS06885 PF01381 Helix-turn-helix V060002_RS06900 PF01376 Heat-labile enterotoxin beta chain V060002_RS06905 PF01375 Heat-labile enterotoxin alpha chain V060002_RS06910 PF05707 Zonular occludens toxin (Zot) V060002_RS06915 PF10734 Protein of unknown function (DUF2523) V060002_RS06920 PF16710 N-terminal N1 domain of Vibrio phage CTXphi pIII V060002_RS06940 PF01381 Helix-turn-helix V060002_RS06955 PF03701 Uncharacterised protein family (UPF0181) V060002_RS06970 PF00486 Transcriptional regulatory protein, C terminal V060002_RS06970 PF00072 Response regulator receiver domain V060002_RS06980 PF02233 NAD(P) transhydrogenase beta subunit V060002_RS06985 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch V060002_RS06985 PF01262 Alanine dehydrogenase/PNT, C-terminal domain V060002_RS06985 PF05222 Alanine dehydrogenase/PNT, N-terminal domain V060002_RS07000 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS07000 PF17158 Membrane-associated sensor, integral membrane domain V060002_RS07020 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS07020 PF08448 PAS fold V060002_RS07055 PF03831 PhnA domain V060002_RS07055 PF08274 PhnA Zinc-Ribbon V060002_RS07065 PF03741 Integral membrane protein TerC family V060002_RS07070 PF02872 5'-nucleotidase, C-terminal domain V060002_RS07070 PF00149 Calcineurin-like phosphoesterase V060002_RS07075 PF11398 Protein of unknown function (DUF2813) V060002_RS07080 PF06496 Protein of unknown function (DUF1097) V060002_RS07085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS07085 PF03466 LysR substrate binding domain V060002_RS07090 PF01226 Formate/nitrite transporter V060002_RS07095 PF04264 YceI-like domain V060002_RS07100 PF01292 Prokaryotic cytochrome b561 V060002_RS07110 PF00563 EAL domain V060002_RS07110 PF10388 EAL-domain associated signalling protein domain V060002_RS07120 PF09335 SNARE associated Golgi protein V060002_RS07125 PF02416 mttA/Hcf106 family V060002_RS07130 PF00072 Response regulator receiver domain V060002_RS07130 PF00486 Transcriptional regulatory protein, C terminal V060002_RS07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS07135 PF02702 Osmosensitive K+ channel His kinase sensor domain V060002_RS07135 PF13493 Domain of unknown function (DUF4118) V060002_RS07135 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS07140 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg V060002_RS07140 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase V060002_RS07140 PF10371 Domain of unknown function V060002_RS07140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V060002_RS07140 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II V060002_RS07145 PF02705 K+ potassium transporter V060002_RS07150 PF01926 50S ribosome-binding GTPase V060002_RS07155 PF07683 Cobalamin synthesis protein cobW C-terminal domain V060002_RS07155 PF02492 CobW/HypB/UreG, nucleotide-binding domain V060002_RS07160 PF00654 Voltage gated chloride channel V060002_RS07170 PF00155 Aminotransferase class I and II V060002_RS07180 PF00072 Response regulator receiver domain V060002_RS07180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS07185 PF13476 AAA domain V060002_RS07190 PF00149 Calcineurin-like phosphoesterase V060002_RS07190 PF12320 Type 5 capsule protein repressor C-terminal domain V060002_RS07195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V060002_RS07195 PF00356 Bacterial regulatory proteins, lacI family V060002_RS07200 PF00381 PTS HPr component phosphorylation site V060002_RS07200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V060002_RS07205 PF00294 pfkB family carbohydrate kinase V060002_RS07210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V060002_RS07210 PF02378 Phosphotransferase system, EIIC V060002_RS07215 PF18030 RimK PreATP-grasp domain V060002_RS07215 PF08443 RimK-like ATP-grasp domain V060002_RS07220 PF00155 Aminotransferase class I and II V060002_RS07230 PF13597 Anaerobic ribonucleoside-triphosphate reductase V060002_RS07230 PF03477 ATP cone domain V060002_RS07255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V060002_RS07325 PF01797 Transposase IS200 like V060002_RS07340 PF07859 alpha/beta hydrolase fold V060002_RS07410 PF05016 ParE toxin of type II toxin-antitoxin system, parDE V060002_RS07420 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V060002_RS07440 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS07445 PF05598 Transposase domain (DUF772) V060002_RS07445 PF01609 Transposase DDE domain V060002_RS07455 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA V060002_RS07460 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system V060002_RS07505 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V060002_RS07565 PF01965 DJ-1/PfpI family V060002_RS07565 PF12833 Helix-turn-helix domain V060002_RS07610 PF01555 DNA methylase V060002_RS07630 PF05016 ParE toxin of type II toxin-antitoxin system, parDE V060002_RS07635 PF08212 Lipocalin-like domain V060002_RS07660 PF02016 LD-carboxypeptidase N-terminal domain V060002_RS07660 PF17676 LD-carboxypeptidase C-terminal domain V060002_RS07685 PF01381 Helix-turn-helix V060002_RS07690 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB V060002_RS07875 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH V060002_RS07935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V060002_RS07945 PF04229 GrpB protein V060002_RS07955 PF17676 LD-carboxypeptidase C-terminal domain V060002_RS07955 PF02016 LD-carboxypeptidase N-terminal domain V060002_RS08040 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V060002_RS08070 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ V060002_RS08105 PF08212 Lipocalin-like domain V060002_RS08110 PF13302 Acetyltransferase (GNAT) domain V060002_RS08135 PF00293 NUDIX domain V060002_RS08165 PF13286 Phosphohydrolase-associated domain V060002_RS08165 PF01966 HD domain V060002_RS08215 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS08265 PF00589 Phage integrase family V060002_RS08265 PF13495 Phage integrase, N-terminal SAM-like domain V060002_RS08270 PF00453 Ribosomal protein L20 V060002_RS08275 PF01632 Ribosomal protein L35 V060002_RS08280 PF05198 Translation initiation factor IF-3, N-terminal domain V060002_RS08280 PF00707 Translation initiation factor IF-3, C-terminal domain V060002_RS08285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) V060002_RS08285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain V060002_RS08285 PF02824 TGS domain V060002_RS08285 PF03129 Anticodon binding domain V060002_RS08310 PF01609 Transposase DDE domain V060002_RS08310 PF05598 Transposase domain (DUF772) V060002_RS08320 PF01571 Aminomethyltransferase folate-binding domain V060002_RS08320 PF08669 Glycine cleavage T-protein C-terminal barrel domain V060002_RS08330 PF00464 Serine hydroxymethyltransferase V060002_RS08335 PF01597 Glycine cleavage H-protein V060002_RS08340 PF02347 Glycine cleavage system P-protein V060002_RS08350 PF01797 Transposase IS200 like V060002_RS08355 PF00194 Eukaryotic-type carbonic anhydrase V060002_RS08370 PF07943 Penicillin-binding protein 5, C-terminal domain V060002_RS08370 PF00768 D-alanyl-D-alanine carboxypeptidase V060002_RS08375 PF00282 Pyridoxal-dependent decarboxylase conserved domain V060002_RS08380 PF00672 HAMP domain V060002_RS08380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS08380 PF02743 Cache domain V060002_RS08385 PF07690 Major Facilitator Superfamily V060002_RS08425 PF13426 PAS domain V060002_RS08425 PF14827 Double sensory domain of two-component sensor kinase V060002_RS08425 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS08425 PF00672 HAMP domain V060002_RS08430 PF00072 Response regulator receiver domain V060002_RS08430 PF00486 Transcriptional regulatory protein, C terminal V060002_RS08450 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS08455 PF00128 Alpha amylase, catalytic domain V060002_RS08460 PF01292 Prokaryotic cytochrome b561 V060002_RS08470 PF00455 DeoR C terminal sensor domain V060002_RS08470 PF08220 DeoR-like helix-turn-helix domain V060002_RS08475 PF03611 PTS system sugar-specific permease component V060002_RS08480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V060002_RS08485 PF00596 Class II Aldolase and Adducin N-terminal domain V060002_RS08495 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family V060002_RS08500 PF01261 Xylose isomerase-like TIM barrel V060002_RS08510 PF00072 Response regulator receiver domain V060002_RS08510 PF00486 Transcriptional regulatory protein, C terminal V060002_RS08515 PF00672 HAMP domain V060002_RS08515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS08515 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS08530 PF00871 Acetokinase family V060002_RS08540 PF00593 TonB dependent receptor V060002_RS08540 PF07715 TonB-dependent Receptor Plug Domain V060002_RS08545 PF12833 Helix-turn-helix domain V060002_RS08550 PF00005 ABC transporter V060002_RS08555 PF01032 FecCD transport family V060002_RS08560 PF01032 FecCD transport family V060002_RS08580 PF00801 PKD domain V060002_RS08580 PF05547 Immune inhibitor A peptidase M6 V060002_RS08585 PF03280 Proteobacterial lipase chaperone protein V060002_RS08590 PF00561 alpha/beta hydrolase fold V060002_RS08595 PF12729 Four helix bundle sensory module for signal transduction V060002_RS08595 PF00672 HAMP domain V060002_RS08595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS08600 PF12563 Hemolytic toxin N terminal V060002_RS08600 PF07968 Leukocidin/Hemolysin toxin family V060002_RS08600 PF16458 Beta-prism lectin V060002_RS08605 PF00657 GDSL-like Lipase/Acylhydrolase V060002_RS08610 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS08610 PF08448 PAS fold V060002_RS08620 PF07690 Major Facilitator Superfamily V060002_RS08625 PF03553 Na+/H+ antiporter family V060002_RS08635 PF00497 Bacterial extracellular solute-binding proteins, family 3 V060002_RS08635 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS08635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS08640 PF11849 Domain of unknown function (DUF3369) V060002_RS08650 PF01467 Cytidylyltransferase-like V060002_RS08655 PF02540 NAD synthase V060002_RS08660 PF03605 Anaerobic c4-dicarboxylate membrane transporter V060002_RS08665 PF00270 DEAD/DEAH box helicase V060002_RS08665 PF00271 Helicase conserved C-terminal domain V060002_RS08680 PF01797 Transposase IS200 like V060002_RS08700 PF00145 C-5 cytosine-specific DNA methylase V060002_RS08705 PF00478 IMP dehydrogenase / GMP reductase domain V060002_RS08720 PF07885 Ion channel V060002_RS08730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V060002_RS08730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain V060002_RS08735 PF03853 YjeF-related protein N-terminus V060002_RS08735 PF01256 Carbohydrate kinase V060002_RS08745 PF00072 Response regulator receiver domain V060002_RS08760 PF03889 Alternative ribosome-rescue factor A V060002_RS08765 PF00313 'Cold-shock' DNA-binding domain V060002_RS08770 PF00175 Oxidoreductase NAD-binding domain V060002_RS08770 PF00042 Globin V060002_RS08770 PF00970 Oxidoreductase FAD-binding domain V060002_RS08775 PF01590 GAF domain V060002_RS08775 PF00158 Sigma-54 interaction domain V060002_RS08785 PF01546 Peptidase family M20/M25/M40 V060002_RS08785 PF07687 Peptidase dimerisation domain V060002_RS08790 PF07670 Nucleoside recognition V060002_RS08790 PF01773 Na+ dependent nucleoside transporter N-terminus V060002_RS08790 PF07662 Na+ dependent nucleoside transporter C-terminus V060002_RS08805 PF02743 Cache domain V060002_RS08805 PF00672 HAMP domain V060002_RS08805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS08810 PF17863 AAA lid domain V060002_RS08810 PF07726 ATPase family associated with various cellular activities (AAA) V060002_RS08815 PF01882 Protein of unknown function DUF58 V060002_RS08830 PF13519 von Willebrand factor type A domain V060002_RS08830 PF07584 Aerotolerance regulator N-terminal V060002_RS08845 PF00313 'Cold-shock' DNA-binding domain V060002_RS08850 PF08448 PAS fold V060002_RS08850 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS08850 PF00563 EAL domain V060002_RS08860 PF12843 Putative quorum-sensing-regulated virulence factor V060002_RS08870 PF01212 Beta-eliminating lyase V060002_RS08875 PF03222 Tryptophan/tyrosine permease family V060002_RS08880 PF00582 Universal stress protein family V060002_RS08890 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter V060002_RS08890 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus V060002_RS08890 PF13244 Domain of unknown function (DUF4040) V060002_RS08890 PF00361 Proton-conducting membrane transporter V060002_RS08895 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L V060002_RS08900 PF00361 Proton-conducting membrane transporter V060002_RS08905 PF01899 Na+/H+ ion antiporter subunit V060002_RS08910 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) V060002_RS08915 PF03334 Na+/H+ antiporter subunit V060002_RS08925 PF01327 Polypeptide deformylase V060002_RS08930 PF00041 Fibronectin type III domain V060002_RS08930 PF12561 ToxR activated gene A lipoprotein domain V060002_RS08935 PF01266 FAD dependent oxidoreductase V060002_RS08955 PF00158 Sigma-54 interaction domain V060002_RS08955 PF00072 Response regulator receiver domain V060002_RS08955 PF02954 Bacterial regulatory protein, Fis family V060002_RS08960 PF02743 Cache domain V060002_RS08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS08960 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS08975 PF07690 Major Facilitator Superfamily V060002_RS08980 PF03009 Glycerophosphoryl diester phosphodiesterase family V060002_RS08990 PF01048 Phosphorylase superfamily V060002_RS09000 PF00356 Bacterial regulatory proteins, lacI family V060002_RS09005 PF00294 pfkB family carbohydrate kinase V060002_RS09010 PF13407 Periplasmic binding protein domain V060002_RS09015 PF02653 Branched-chain amino acid transport system / permease component V060002_RS09020 PF00005 ABC transporter V060002_RS09025 PF05025 RbsD / FucU transport protein family V060002_RS09040 PF04717 Type VI secretion system, phage-baseplate injector V060002_RS09040 PF01471 Putative peptidoglycan binding domain V060002_RS09055 PF14331 ImcF-related N-terminal domain V060002_RS09055 PF06744 Type VI secretion protein IcmF C-terminal V060002_RS09055 PF06761 Intracellular multiplication and human macrophage-killing V060002_RS09070 PF00158 Sigma-54 interaction domain V060002_RS09070 PF02954 Bacterial regulatory protein, Fis family V060002_RS09075 PF00004 ATPase family associated with various cellular activities (AAA) V060002_RS09075 PF07724 AAA domain (Cdc48 subfamily) V060002_RS09075 PF17871 AAA lid domain V060002_RS09075 PF10431 C-terminal, D2-small domain, of ClpB protein V060002_RS09085 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE V060002_RS09105 PF05947 Type VI secretion system, TssF V060002_RS09115 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath V060002_RS09135 PF00849 RNA pseudouridylate synthase V060002_RS09140 PF01740 STAS domain V060002_RS09140 PF00916 Sulfate permease family V060002_RS09145 PF13419 Haloacid dehalogenase-like hydrolase V060002_RS09150 PF00196 Bacterial regulatory proteins, luxR family V060002_RS09150 PF00563 EAL domain V060002_RS09155 PF00581 Rhodanese-like domain V060002_RS09160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain V060002_RS09160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V060002_RS09165 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain V060002_RS09165 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family V060002_RS09180 PF07504 Fungalysin/Thermolysin Propeptide Motif V060002_RS09180 PF01483 Proprotein convertase P-domain V060002_RS09180 PF01447 Thermolysin metallopeptidase, catalytic domain V060002_RS09180 PF02868 Thermolysin metallopeptidase, alpha-helical domain V060002_RS09200 PF02001 Protein of unknown function DUF134 V060002_RS09210 PF00375 Sodium:dicarboxylate symporter family V060002_RS09230 PF09278 MerR, DNA binding V060002_RS09230 PF00376 MerR family regulatory protein V060002_RS09235 PF07690 Major Facilitator Superfamily V060002_RS09240 PF03466 LysR substrate binding domain V060002_RS09240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS09245 PF03707 Bacterial signalling protein N terminal repeat V060002_RS09245 PF13188 PAS domain V060002_RS09245 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS09245 PF00563 EAL domain V060002_RS09250 PF01476 LysM domain V060002_RS09250 PF08525 Opacity-associated protein A N-terminal motif V060002_RS09250 PF01551 Peptidase family M23 V060002_RS09265 PF00916 Sulfate permease family V060002_RS09265 PF01740 STAS domain V060002_RS09270 PF07670 Nucleoside recognition V060002_RS09285 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS09285 PF00563 EAL domain V060002_RS09285 PF03707 Bacterial signalling protein N terminal repeat V060002_RS09290 PF00005 ABC transporter V060002_RS09295 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS09300 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS09305 PF12849 PBP superfamily domain V060002_RS09310 PF12729 Four helix bundle sensory module for signal transduction V060002_RS09310 PF00672 HAMP domain V060002_RS09310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS09330 PF00593 TonB dependent receptor V060002_RS09330 PF07715 TonB-dependent Receptor Plug Domain V060002_RS09335 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain V060002_RS09335 PF00326 Prolyl oligopeptidase family V060002_RS09340 PF00271 Helicase conserved C-terminal domain V060002_RS09340 PF00270 DEAD/DEAH box helicase V060002_RS09350 PF03734 L,D-transpeptidase catalytic domain V060002_RS09350 PF17969 L,D-transpeptidase C-terminal domain V060002_RS09350 PF01476 LysM domain V060002_RS09355 PF03441 FAD binding domain of DNA photolyase V060002_RS09355 PF00875 DNA photolyase V060002_RS09360 PF13411 MerR HTH family regulatory protein V060002_RS09365 PF08349 Protein of unknown function (DUF1722) V060002_RS09375 PF01048 Phosphorylase superfamily V060002_RS09390 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS09395 PF11742 Protein of unknown function (DUF3302) V060002_RS09400 PF00529 HlyD membrane-fusion protein of T1SS V060002_RS09400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V060002_RS09415 PF12945 Flagellar protein YcgR V060002_RS09415 PF07238 PilZ domain V060002_RS09420 PF03616 Sodium/glutamate symporter V060002_RS09435 PF02630 SCO1/SenC V060002_RS09445 PF00375 Sodium:dicarboxylate symporter family V060002_RS09450 PF01569 PAP2 superfamily V060002_RS09470 PF00672 HAMP domain V060002_RS09470 PF02743 Cache domain V060002_RS09470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS09490 PF08329 Chitinase A, N-terminal domain V060002_RS09490 PF00704 Glycosyl hydrolases family 18 V060002_RS09495 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) V060002_RS09500 PF00939 Sodium:sulfate symporter transmembrane region V060002_RS09510 PF00842 Alanine racemase, C-terminal domain V060002_RS09510 PF01757 Acyltransferase family V060002_RS09510 PF01168 Alanine racemase, N-terminal domain V060002_RS09530 PF13503 Domain of unknown function (DUF4123) V060002_RS09535 PF04717 Type VI secretion system, phage-baseplate injector V060002_RS09540 PF05638 Type VI secretion system effector, Hcp V060002_RS09550 PF00128 Alpha amylase, catalytic domain V060002_RS09550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V060002_RS09550 PF02806 Alpha amylase, C-terminal all-beta domain V060002_RS09555 PF02446 4-alpha-glucanotransferase V060002_RS09560 PF00343 Carbohydrate phosphorylase V060002_RS09565 PF00196 Bacterial regulatory proteins, luxR family V060002_RS09565 PF17874 MalT-like TPR region V060002_RS09570 PF10928 Protein of unknown function (DUF2810) V060002_RS09580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS09580 PF17200 Single Cache domain 2 V060002_RS09580 PF00672 HAMP domain V060002_RS09585 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase V060002_RS09585 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase V060002_RS09590 PF01709 Transcriptional regulator V060002_RS09620 PF18607 ParA helix turn helix domain V060002_RS09620 PF13614 AAA domain V060002_RS09625 PF08775 ParB family V060002_RS09625 PF02195 ParB-like nuclease domain V060002_RS09630 PF13416 Bacterial extracellular solute-binding protein V060002_RS09635 PF05127 Helicase V060002_RS09635 PF13718 GNAT acetyltransferase 2 V060002_RS09645 PF00501 AMP-binding enzyme V060002_RS09665 PF00072 Response regulator receiver domain V060002_RS09665 PF00486 Transcriptional regulatory protein, C terminal V060002_RS09670 PF08521 Two-component sensor kinase N-terminal V060002_RS09670 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS09670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS09675 PF00884 Sulfatase V060002_RS09675 PF08019 Phosphoethanolamine transferase EptA/EptB V060002_RS09680 PF00005 ABC transporter V060002_RS09680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V060002_RS09685 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS09685 PF12911 N-terminal TM domain of oligopeptide transport permease C V060002_RS09690 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS09705 PF00072 Response regulator receiver domain V060002_RS09710 PF01584 CheW-like domain V060002_RS09710 PF09078 CheY binding V060002_RS09710 PF01627 Hpt domain V060002_RS09710 PF02895 Signal transducing histidine kinase, homodimeric domain V060002_RS09710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS09715 PF01584 CheW-like domain V060002_RS09720 PF01584 CheW-like domain V060002_RS09725 PF00672 HAMP domain V060002_RS09725 PF02203 Tar ligand binding domain homologue V060002_RS09725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS09730 PF01739 CheR methyltransferase, SAM binding domain V060002_RS09730 PF03705 CheR methyltransferase, all-alpha domain V060002_RS09735 PF03975 CheD chemotactic sensory transduction V060002_RS09740 PF01339 CheB methylesterase V060002_RS09740 PF00072 Response regulator receiver domain V060002_RS09745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS09745 PF00672 HAMP domain V060002_RS09745 PF02743 Cache domain V060002_RS09755 PF00486 Transcriptional regulatory protein, C terminal V060002_RS09755 PF00072 Response regulator receiver domain V060002_RS09765 PF00664 ABC transporter transmembrane region V060002_RS09765 PF00005 ABC transporter V060002_RS09765 PF03412 Peptidase C39 family V060002_RS09780 PF00529 HlyD membrane-fusion protein of T1SS V060002_RS09785 PF01243 Pyridoxamine 5'-phosphate oxidase V060002_RS09785 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region V060002_RS09790 PF00072 Response regulator receiver domain V060002_RS09790 PF00196 Bacterial regulatory proteins, luxR family V060002_RS09795 PF03781 Sulfatase-modifying factor enzyme 1 V060002_RS09805 PF12833 Helix-turn-helix domain V060002_RS09810 PF00171 Aldehyde dehydrogenase family V060002_RS09810 PF18327 Proline utilization A proline dehydrogenase N-terminal domain V060002_RS09810 PF14850 DNA-binding domain of Proline dehydrogenase V060002_RS09810 PF01619 Proline dehydrogenase V060002_RS09820 PF00474 Sodium:solute symporter family V060002_RS09830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS09830 PF00672 HAMP domain V060002_RS09830 PF02743 Cache domain V060002_RS09835 PF01037 Lrp/AsnC ligand binding domain V060002_RS09840 PF00171 Aldehyde dehydrogenase family V060002_RS09850 PF10940 Protein of unknown function (DUF2618) V060002_RS09855 PF01276 Orn/Lys/Arg decarboxylase, major domain V060002_RS09855 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain V060002_RS09855 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain V060002_RS09860 PF13520 Amino acid permease V060002_RS09870 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase V060002_RS09875 PF04013 Putative SAM-dependent RNA methyltransferase V060002_RS09880 PF03466 LysR substrate binding domain V060002_RS09880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS09885 PF00106 short chain dehydrogenase V060002_RS09895 PF00672 HAMP domain V060002_RS09895 PF02743 Cache domain V060002_RS09895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS09900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS09900 PF03466 LysR substrate binding domain V060002_RS09905 PF13460 NAD(P)H-binding V060002_RS09935 PF01408 Oxidoreductase family, NAD-binding Rossmann fold V060002_RS09940 PF05068 Mannitol repressor V060002_RS09945 PF01232 Mannitol dehydrogenase Rossmann domain V060002_RS09945 PF08125 Mannitol dehydrogenase C-terminal domain V060002_RS09950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V060002_RS09950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 V060002_RS09950 PF02378 Phosphotransferase system, EIIC V060002_RS09960 PF04225 Opacity-associated protein A LysM-like domain V060002_RS09960 PF01551 Peptidase family M23 V060002_RS09970 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III V060002_RS09970 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I V060002_RS09970 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain V060002_RS09970 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II V060002_RS09975 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS09980 PF00497 Bacterial extracellular solute-binding proteins, family 3 V060002_RS09985 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS09990 PF00005 ABC transporter V060002_RS09995 PF00793 DAHP synthetase I family V060002_RS10005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS10005 PF00672 HAMP domain V060002_RS10020 PF00672 HAMP domain V060002_RS10020 PF12729 Four helix bundle sensory module for signal transduction V060002_RS10020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS10030 PF00128 Alpha amylase, catalytic domain V060002_RS10030 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) V060002_RS10035 PF02264 LamB porin V060002_RS10040 PF07148 Maltose operon periplasmic protein precursor (MalM) V060002_RS10050 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase V060002_RS10070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS10070 PF03466 LysR substrate binding domain V060002_RS10075 PF07681 DoxX V060002_RS10080 PF06029 AlkA N-terminal domain V060002_RS10080 PF00730 HhH-GPD superfamily base excision DNA repair protein V060002_RS10085 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain V060002_RS10085 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain V060002_RS10095 PF03600 Citrate transporter V060002_RS10100 PF07670 Nucleoside recognition V060002_RS10105 PF07670 Nucleoside recognition V060002_RS10110 PF00462 Glutaredoxin V060002_RS10115 PF00892 EamA-like transporter family V060002_RS10120 PF13609 Gram-negative porin V060002_RS10125 PF02566 OsmC-like protein V060002_RS10130 PF01047 MarR family V060002_RS10135 PF01557 Fumarylacetoacetate (FAA) hydrolase family V060002_RS10150 PF12833 Helix-turn-helix domain V060002_RS10155 PF01810 LysE type translocator V060002_RS10165 PF00724 NADH:flavin oxidoreductase / NADH oxidase family V060002_RS10175 PF00664 ABC transporter transmembrane region V060002_RS10175 PF00005 ABC transporter V060002_RS10185 PF00724 NADH:flavin oxidoreductase / NADH oxidase family V060002_RS10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS10195 PF03466 LysR substrate binding domain V060002_RS10200 PF00270 DEAD/DEAH box helicase V060002_RS10200 PF00271 Helicase conserved C-terminal domain V060002_RS10205 PF01554 MatE V060002_RS10210 PF08447 PAS fold V060002_RS10210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS10215 PF02896 PEP-utilising enzyme, TIM barrel domain V060002_RS10215 PF00391 PEP-utilising enzyme, mobile domain V060002_RS10215 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain V060002_RS10220 PF03618 Kinase/pyrophosphorylase V060002_RS10230 PF01070 FMN-dependent dehydrogenase V060002_RS10235 PF02652 L-lactate permease V060002_RS10240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS10240 PF03466 LysR substrate binding domain V060002_RS10255 PF08447 PAS fold V060002_RS10255 PF13426 PAS domain V060002_RS10255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS10260 PF00497 Bacterial extracellular solute-binding proteins, family 3 V060002_RS10265 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V060002_RS10265 PF00005 ABC transporter V060002_RS10275 PF13654 AAA domain V060002_RS10275 PF05362 Lon protease (S16) C-terminal proteolytic domain V060002_RS10280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS10280 PF17200 Single Cache domain 2 V060002_RS10280 PF00672 HAMP domain V060002_RS10290 PF07690 Major Facilitator Superfamily V060002_RS10300 PF06865 Pyrimidine/purine nucleoside phosphorylase V060002_RS10305 PF05726 Pirin C-terminal cupin domain V060002_RS10305 PF02678 Pirin V060002_RS10315 PF00563 EAL domain V060002_RS10315 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS10320 PF03466 LysR substrate binding domain V060002_RS10320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS10340 PF03707 Bacterial signalling protein N terminal repeat V060002_RS10340 PF00563 EAL domain V060002_RS10340 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS10360 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS10365 PF01047 MarR family V060002_RS10370 PF01584 CheW-like domain V060002_RS10370 PF00072 Response regulator receiver domain V060002_RS10380 PF00196 Bacterial regulatory proteins, luxR family V060002_RS10385 PF01906 Putative heavy-metal-binding V060002_RS10400 PF13302 Acetyltransferase (GNAT) domain V060002_RS10405 PF00005 ABC transporter V060002_RS10405 PF08402 TOBE domain V060002_RS10410 PF01547 Bacterial extracellular solute-binding protein V060002_RS10415 PF14785 Maltose transport system permease protein MalF P2 domain V060002_RS10415 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS10420 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS10435 PF00455 DeoR C terminal sensor domain V060002_RS10435 PF08220 DeoR-like helix-turn-helix domain V060002_RS10440 PF08448 PAS fold V060002_RS10440 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS10470 PF00313 'Cold-shock' DNA-binding domain V060002_RS10480 PF05661 Protein of unknown function (DUF808) V060002_RS10485 PF05958 tRNA (Uracil-5-)-methyltransferase V060002_RS10495 PF05656 Protein of unknown function (DUF805) V060002_RS10505 PF01979 Amidohydrolase family V060002_RS10515 PF03476 MOSC N-terminal beta barrel domain V060002_RS10515 PF00111 2Fe-2S iron-sulfur cluster binding domain V060002_RS10515 PF03476 MOSC N-terminal beta barrel domain V060002_RS10515 PF03473 MOSC domain V060002_RS10515 PF00111 2Fe-2S iron-sulfur cluster binding domain V060002_RS10515 PF03473 MOSC domain V060002_RS10520 PF02743 Cache domain V060002_RS10520 PF00672 HAMP domain V060002_RS10520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS10550 PF00005 ABC transporter V060002_RS10555 PF01032 FecCD transport family V060002_RS10560 PF01497 Periplasmic binding protein V060002_RS10565 PF02472 Biopolymer transport protein ExbD/TolR V060002_RS10570 PF01618 MotA/TolQ/ExbB proton channel family V060002_RS10575 PF03544 Gram-negative bacterial TonB protein C-terminal V060002_RS10580 PF04055 Radical SAM superfamily V060002_RS10585 PF06228 Haem utilisation ChuX/HutX V060002_RS10590 PF01243 Pyridoxamine 5'-phosphate oxidase V060002_RS10595 PF00672 HAMP domain V060002_RS10595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS10600 PF13556 PucR C-terminal helix-turn-helix domain V060002_RS10600 PF05651 Putative sugar diacid recognition V060002_RS10600 PF17853 GGDEF-like domain V060002_RS10605 PF02447 GntP family permease V060002_RS10610 PF02595 Glycerate kinase family V060002_RS10635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase V060002_RS10635 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain V060002_RS10640 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase V060002_RS10645 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain V060002_RS10645 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain V060002_RS10650 PF01966 HD domain V060002_RS10675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V060002_RS10680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS10680 PF03466 LysR substrate binding domain V060002_RS10700 PF00155 Aminotransferase class I and II V060002_RS10705 PF00107 Zinc-binding dehydrogenase V060002_RS10705 PF08240 Alcohol dehydrogenase GroES-like domain V060002_RS10745 PF12167 Arm DNA-binding domain V060002_RS10745 PF00589 Phage integrase family V060002_RS10755 PF03466 LysR substrate binding domain V060002_RS10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS10760 PF00291 Pyridoxal-phosphate dependent enzyme V060002_RS10775 PF02322 Cytochrome bd terminal oxidase subunit II V060002_RS10780 PF01654 Cytochrome bd terminal oxidase subunit I V060002_RS10785 PF00155 Aminotransferase class I and II V060002_RS10785 PF00392 Bacterial regulatory proteins, gntR family V060002_RS10790 PF00768 D-alanyl-D-alanine carboxypeptidase V060002_RS10800 PF03922 OmpW family V060002_RS10810 PF07504 Fungalysin/Thermolysin Propeptide Motif V060002_RS10810 PF03413 Peptidase propeptide and YPEB domain V060002_RS10810 PF01447 Thermolysin metallopeptidase, catalytic domain V060002_RS10810 PF02868 Thermolysin metallopeptidase, alpha-helical domain V060002_RS10810 PF04151 Bacterial pre-peptidase C-terminal domain V060002_RS10815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS10815 PF13426 PAS domain V060002_RS10815 PF08447 PAS fold V060002_RS10820 PF12262 Bacterial virulence factor lipase N-terminal V060002_RS10825 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) V060002_RS10835 PF00128 Alpha amylase, catalytic domain V060002_RS10840 PF00248 Aldo/keto reductase family V060002_RS10855 PF00005 ABC transporter V060002_RS10860 PF02687 FtsX-like permease family V060002_RS10860 PF00005 ABC transporter V060002_RS10860 PF12704 MacB-like periplasmic core domain V060002_RS10875 PF07694 5TMR of 5TMR-LYT V060002_RS10875 PF13492 GAF domain V060002_RS10875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS10875 PF06580 Histidine kinase V060002_RS10880 PF04397 LytTr DNA-binding domain V060002_RS10880 PF00072 Response regulator receiver domain V060002_RS10890 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS10895 PF13520 Amino acid permease V060002_RS10910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V060002_RS10910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V060002_RS10915 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region V060002_RS10920 PF02566 OsmC-like protein V060002_RS10925 PF00571 CBS domain V060002_RS10925 PF03471 Transporter associated domain V060002_RS10925 PF01595 Cyclin M transmembrane N-terminal domain V060002_RS10930 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal V060002_RS10930 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS10930 PF14602 Hexapeptide repeat of succinyl-transferase V060002_RS10935 PF00892 EamA-like transporter family V060002_RS10945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS10945 PF03466 LysR substrate binding domain V060002_RS10970 PF00501 AMP-binding enzyme V060002_RS10970 PF13193 AMP-binding enzyme C-terminal domain V060002_RS10975 PF00351 Biopterin-dependent aromatic amino acid hydroxylase V060002_RS10980 PF01329 Pterin 4 alpha carbinolamine dehydratase V060002_RS10985 PF00583 Acetyltransferase (GNAT) family V060002_RS10990 PF00202 Aminotransferase class-III V060002_RS10995 PF06339 Ectoine synthase V060002_RS11000 PF00696 Amino acid kinase family V060002_RS11000 PF13840 ACT domain V060002_RS11010 PF00118 TCP-1/cpn60 chaperonin family V060002_RS11015 PF00166 Chaperonin 10 Kd subunit V060002_RS11020 PF00571 CBS domain V060002_RS11020 PF01769 Divalent cation transporter V060002_RS11020 PF03448 MgtE intracellular N domain V060002_RS11030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain V060002_RS11030 PF17810 Arginine decarboxylase helical bundle domain V060002_RS11030 PF17944 Arginine decarboxylase C-terminal helical extension V060002_RS11035 PF00491 Arginase family V060002_RS11040 PF04389 Peptidase family M28 V060002_RS11040 PF04151 Bacterial pre-peptidase C-terminal domain V060002_RS11045 PF01447 Thermolysin metallopeptidase, catalytic domain V060002_RS11045 PF07504 Fungalysin/Thermolysin Propeptide Motif V060002_RS11045 PF03413 Peptidase propeptide and YPEB domain V060002_RS11045 PF02868 Thermolysin metallopeptidase, alpha-helical domain V060002_RS11045 PF04151 Bacterial pre-peptidase C-terminal domain V060002_RS11050 PF18416 N-acetylglucosamine binding protein domain 2 V060002_RS11050 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading V060002_RS11055 PF04244 Deoxyribodipyrimidine photo-lyase-related protein V060002_RS11060 PF01575 MaoC like domain V060002_RS11065 PF12849 PBP superfamily domain V060002_RS11075 PF08206 Ribonuclease B OB domain V060002_RS11075 PF00773 RNB domain V060002_RS11075 PF00575 S1 RNA binding domain V060002_RS11080 PF00270 DEAD/DEAH box helicase V060002_RS11080 PF03880 DbpA RNA binding domain V060002_RS11080 PF00271 Helicase conserved C-terminal domain V060002_RS11090 PF00884 Sulfatase V060002_RS11095 PF00294 pfkB family carbohydrate kinase V060002_RS11110 PF13419 Haloacid dehalogenase-like hydrolase V060002_RS11120 PF02796 Helix-turn-helix domain of resolvase V060002_RS11120 PF00239 Resolvase, N terminal domain V060002_RS11145 PF04002 RadC-like JAB domain V060002_RS11155 PF13088 BNR repeat-like domain V060002_RS11155 PF09264 Vibrio cholerae sialidase, lectin insertion V060002_RS11160 PF01979 Amidohydrolase family V060002_RS11165 PF00480 ROK family V060002_RS11170 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase V060002_RS11180 PF03480 Bacterial extracellular solute-binding protein, family 7 V060002_RS11185 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component V060002_RS11190 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component V060002_RS11195 PF00701 Dihydrodipicolinate synthetase family V060002_RS11200 PF01418 Helix-turn-helix domain, rpiR family V060002_RS11200 PF01380 SIS domain V060002_RS11205 PF01344 Kelch motif V060002_RS11210 PF07646 Kelch motif V060002_RS11230 PF02384 N-6 DNA Methylase V060002_RS11250 PF18766 SWI2/SNF2 ATPase V060002_RS11250 PF11867 Domain of unknown function (DUF3387) V060002_RS11250 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) V060002_RS11270 PF12419 SNF2 Helicase protein V060002_RS11270 PF00271 Helicase conserved C-terminal domain V060002_RS11270 PF00176 SNF2 family N-terminal domain V060002_RS11275 PF13356 Arm DNA-binding domain V060002_RS11275 PF00589 Phage integrase family V060002_RS11280 PF13356 Arm DNA-binding domain V060002_RS11280 PF00589 Phage integrase family V060002_RS11290 PF00873 AcrB/AcrD/AcrF family V060002_RS11295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V060002_RS11305 PF02470 MlaD protein V060002_RS11310 PF04403 Paraquat-inducible protein A V060002_RS11315 PF05552 Conserved TM helix V060002_RS11315 PF00924 Mechanosensitive ion channel V060002_RS11340 PF00440 Bacterial regulatory proteins, tetR family V060002_RS11340 PF08362 YcdC-like protein, C-terminal region V060002_RS11345 PF00171 Aldehyde dehydrogenase family V060002_RS11350 PF07383 Protein of unknown function (DUF1496) V060002_RS11360 PF16295 Tetracyclin repressor-like, C-terminal domain V060002_RS11360 PF00440 Bacterial regulatory proteins, tetR family V060002_RS11365 PF02770 Acyl-CoA dehydrogenase, middle domain V060002_RS11365 PF02771 Acyl-CoA dehydrogenase, N-terminal domain V060002_RS11365 PF09317 Domain of unknown function (DUF1974) V060002_RS11365 PF00441 Acyl-CoA dehydrogenase, C-terminal domain V060002_RS11370 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase V060002_RS11370 PF12241 Trans-2-enoyl-CoA reductase catalytic region V060002_RS11370 PF07055 Enoyl reductase FAD binding domain V060002_RS11380 PF01176 Translation initiation factor 1A / IF-1 V060002_RS11385 PF04377 Arginine-tRNA-protein transferase, C terminus V060002_RS11385 PF04376 Arginine-tRNA-protein transferase, N terminus V060002_RS11390 PF03588 Leucyl/phenylalanyl-tRNA protein transferase V060002_RS11400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) V060002_RS11405 PF10692 Protein of unknown function (DUF2498) V060002_RS11410 PF01396 Topoisomerase DNA binding C4 zinc finger V060002_RS11410 PF01751 Toprim domain V060002_RS11410 PF01131 DNA topoisomerase V060002_RS11410 PF08272 Topoisomerase I zinc-ribbon-like V060002_RS11415 PF00483 Nucleotidyl transferase V060002_RS11420 PF08323 Starch synthase catalytic domain V060002_RS11420 PF00534 Glycosyl transferases group 1 V060002_RS11440 PF04994 TfoX C-terminal domain V060002_RS11440 PF04993 TfoX N-terminal domain V060002_RS11445 PF00356 Bacterial regulatory proteins, lacI family V060002_RS11455 PF02613 Nitrate reductase delta subunit V060002_RS11460 PF00486 Transcriptional regulatory protein, C terminal V060002_RS11460 PF00072 Response regulator receiver domain V060002_RS11465 PF02698 DUF218 domain V060002_RS11470 PF13847 Methyltransferase domain V060002_RS11475 PF17192 MukF middle domain V060002_RS11475 PF17193 MukF C-terminal domain V060002_RS11475 PF03882 MukF winged-helix domain V060002_RS11480 PF04288 MukE-like family V060002_RS11485 PF16330 MukB hinge domain V060002_RS11485 PF04310 MukB N-terminal V060002_RS11490 PF01037 Lrp/AsnC ligand binding domain V060002_RS11495 PF01810 LysE type translocator V060002_RS11500 PF11842 Domain of unknown function (DUF3362) V060002_RS11500 PF04055 Radical SAM superfamily V060002_RS11500 PF08497 Radical SAM N-terminal V060002_RS11505 PF00563 EAL domain V060002_RS11505 PF08448 PAS fold V060002_RS11505 PF08447 PAS fold V060002_RS11505 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS11510 PF05193 Peptidase M16 inactive domain V060002_RS11510 PF00675 Insulinase (Peptidase family M16) V060002_RS11525 PF03466 LysR substrate binding domain V060002_RS11525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS11530 PF08267 Cobalamin-independent synthase, N-terminal domain V060002_RS11530 PF01717 Cobalamin-independent synthase, Catalytic domain V060002_RS11540 PF03795 YCII-related domain V060002_RS11545 PF03061 Thioesterase superfamily V060002_RS11550 PF04279 Intracellular septation protein A V060002_RS11560 PF02698 DUF218 domain V060002_RS11565 PF01370 NAD dependent epimerase/dehydratase family V060002_RS11580 PF01226 Formate/nitrite transporter V060002_RS11590 PF06796 Periplasmic nitrate reductase protein NapE V060002_RS11595 PF03264 NapC/NirT cytochrome c family, N-terminal region V060002_RS11600 PF18364 Molybdopterin oxidoreductase N-terminal domain V060002_RS11600 PF01568 Molydopterin dinucleotide binding domain V060002_RS11600 PF00384 Molybdopterin oxidoreductase V060002_RS11625 PF01368 DHH family V060002_RS11625 PF02833 DHHA2 domain V060002_RS11640 PF00005 ABC transporter V060002_RS11645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V060002_RS11645 PF00005 ABC transporter V060002_RS11650 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS11650 PF12911 N-terminal TM domain of oligopeptide transport permease C V060002_RS11655 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS11660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V060002_RS11665 PF02954 Bacterial regulatory protein, Fis family V060002_RS11665 PF00158 Sigma-54 interaction domain V060002_RS11670 PF04012 PspA/IM30 family V060002_RS11685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V060002_RS11685 PF00529 HlyD membrane-fusion protein of T1SS V060002_RS11690 PF13533 Biotin-lipoyl like V060002_RS11695 PF00873 AcrB/AcrD/AcrF family V060002_RS11700 PF03352 Methyladenine glycosylase V060002_RS11705 PF01053 Cys/Met metabolism PLP-dependent enzyme V060002_RS11710 PF13091 PLD-like domain V060002_RS11710 PF13396 Phospholipase_D-nuclease N-terminal V060002_RS11720 PF00209 Sodium:neurotransmitter symporter family V060002_RS11725 PF00849 RNA pseudouridylate synthase V060002_RS11730 PF01066 CDP-alcohol phosphatidyltransferase V060002_RS11735 PF00005 ABC transporter V060002_RS11740 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS11745 PF13416 Bacterial extracellular solute-binding protein V060002_RS11755 PF06945 Protein of unknown function (DUF1289) V060002_RS11770 PF00005 ABC transporter V060002_RS11775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V060002_RS11780 PF03222 Tryptophan/tyrosine permease family V060002_RS11790 PF00571 CBS domain V060002_RS11790 PF01769 Divalent cation transporter V060002_RS11790 PF03448 MgtE intracellular N domain V060002_RS11795 PF09308 LuxQ, periplasmic V060002_RS11795 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS11795 PF00072 Response regulator receiver domain V060002_RS11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS11800 PF03707 Bacterial signalling protein N terminal repeat V060002_RS11800 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS11800 PF00563 EAL domain V060002_RS11810 PF01752 Collagenase V060002_RS11810 PF04151 Bacterial pre-peptidase C-terminal domain V060002_RS11810 PF08453 Peptidase family M9 N-terminal V060002_RS11820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V060002_RS11820 PF12793 Sugar transport-related sRNA regulator N-term V060002_RS11840 PF12729 Four helix bundle sensory module for signal transduction V060002_RS11840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS11840 PF00672 HAMP domain V060002_RS11855 PF00360 Phytochrome region V060002_RS11855 PF00563 EAL domain V060002_RS11855 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS11855 PF01590 GAF domain V060002_RS11860 PF01386 Ribosomal L25p family V060002_RS11865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS11870 PF00486 Transcriptional regulatory protein, C terminal V060002_RS11870 PF00072 Response regulator receiver domain V060002_RS11880 PF00271 Helicase conserved C-terminal domain V060002_RS11880 PF04851 Type III restriction enzyme, res subunit V060002_RS11885 PF00849 RNA pseudouridylate synthase V060002_RS11885 PF01479 S4 domain V060002_RS11890 PF07690 Major Facilitator Superfamily V060002_RS11900 PF13460 NAD(P)H-binding V060002_RS11900 PF11066 Protein of unknown function (DUF2867) V060002_RS11905 PF01554 MatE V060002_RS11910 PF00005 ABC transporter V060002_RS11915 PF02687 FtsX-like permease family V060002_RS11915 PF12704 MacB-like periplasmic core domain V060002_RS11925 PF06965 Na+/H+ antiporter 1 V060002_RS11935 PF00202 Aminotransferase class-III V060002_RS11940 PF16653 Saccharopine dehydrogenase C-terminal domain V060002_RS11940 PF03435 Saccharopine dehydrogenase NADP binding domain V060002_RS11950 PF00691 OmpA family V060002_RS11950 PF05736 OprF membrane domain V060002_RS11955 PF02321 Outer membrane efflux protein V060002_RS11975 PF03466 LysR substrate binding domain V060002_RS11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS11985 PF01863 Protein of unknown function DUF45 V060002_RS11990 PF05971 RNA methyltransferase V060002_RS12005 PF04204 Homoserine O-succinyltransferase V060002_RS12025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V060002_RS12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS12040 PF00989 PAS fold V060002_RS12040 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain V060002_RS12040 PF17203 Single cache domain 3 V060002_RS12045 PF00072 Response regulator receiver domain V060002_RS12045 PF12431 Transcriptional regulator V060002_RS12055 PF00072 Response regulator receiver domain V060002_RS12055 PF01584 CheW-like domain V060002_RS12075 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS12075 PF00072 Response regulator receiver domain V060002_RS12095 PF07690 Major Facilitator Superfamily V060002_RS12100 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain V060002_RS12100 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain V060002_RS12105 PF08544 GHMP kinases C terminal V060002_RS12105 PF10509 Galactokinase galactose-binding signature V060002_RS12105 PF00288 GHMP kinases N terminal domain V060002_RS12110 PF01263 Aldose 1-epimerase V060002_RS12115 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS12120 PF00563 EAL domain V060002_RS12120 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS12120 PF17154 Gammaproteobacterial periplasmic sensor domain V060002_RS12120 PF00672 HAMP domain V060002_RS12130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain V060002_RS12130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain V060002_RS12130 PF00205 Thiamine pyrophosphate enzyme, central domain V060002_RS12140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS12140 PF03466 LysR substrate binding domain V060002_RS12150 PF00199 Catalase V060002_RS12150 PF06628 Catalase-related immune-responsive V060002_RS12160 PF00080 Copper/zinc superoxide dismutase (SODC) V060002_RS12165 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) V060002_RS12170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus V060002_RS12170 PF00361 Proton-conducting membrane transporter V060002_RS12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS12175 PF03466 LysR substrate binding domain V060002_RS12180 PF13193 AMP-binding enzyme C-terminal domain V060002_RS12180 PF00501 AMP-binding enzyme V060002_RS12195 PF04266 ASCH domain V060002_RS12210 PF00206 Lyase V060002_RS12210 PF10415 Fumarase C C-terminus V060002_RS12225 PF01654 Cytochrome bd terminal oxidase subunit I V060002_RS12230 PF02322 Cytochrome bd terminal oxidase subunit II V060002_RS12235 PF12704 MacB-like periplasmic core domain V060002_RS12235 PF02687 FtsX-like permease family V060002_RS12235 PF00005 ABC transporter V060002_RS12240 PF00005 ABC transporter V060002_RS12240 PF02687 FtsX-like permease family V060002_RS12240 PF12704 MacB-like periplasmic core domain V060002_RS12245 PF12704 MacB-like periplasmic core domain V060002_RS12245 PF00005 ABC transporter V060002_RS12245 PF02687 FtsX-like permease family V060002_RS12255 PF00529 HlyD membrane-fusion protein of T1SS V060002_RS12265 PF03466 LysR substrate binding domain V060002_RS12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS12270 PF00141 Peroxidase V060002_RS12275 PF00232 Glycosyl hydrolase family 1 V060002_RS12280 PF00356 Bacterial regulatory proteins, lacI family V060002_RS12285 PF01042 Endoribonuclease L-PSP V060002_RS12290 PF04074 YhcH/YjgK/YiaL V060002_RS12295 PF03009 Glycerophosphoryl diester phosphodiesterase family V060002_RS12300 PF08220 DeoR-like helix-turn-helix domain V060002_RS12300 PF00455 DeoR C terminal sensor domain V060002_RS12305 PF17912 MalK OB fold domain V060002_RS12305 PF00005 ABC transporter V060002_RS12310 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS12315 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS12320 PF13416 Bacterial extracellular solute-binding protein V060002_RS12330 PF01618 MotA/TolQ/ExbB proton channel family V060002_RS12335 PF01618 MotA/TolQ/ExbB proton channel family V060002_RS12340 PF02472 Biopolymer transport protein ExbD/TolR V060002_RS12345 PF03544 Gram-negative bacterial TonB protein C-terminal V060002_RS12360 PF14743 DNA ligase OB-like domain V060002_RS12360 PF01068 ATP dependent DNA ligase domain V060002_RS12370 PF01554 MatE V060002_RS12380 PF03881 Fructosamine kinase V060002_RS12390 PF00877 NlpC/P60 family V060002_RS12395 PF00672 HAMP domain V060002_RS12395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS12395 PF02743 Cache domain V060002_RS12405 PF03942 DTW domain V060002_RS12410 PF00480 ROK family V060002_RS12440 PF03454 MoeA C-terminal region (domain IV) V060002_RS12440 PF03453 MoeA N-terminal region (domain I and II) V060002_RS12440 PF00994 Probable molybdopterin binding domain V060002_RS12445 PF12804 MobA-like NTP transferase domain V060002_RS12450 PF00005 ABC transporter V060002_RS12450 PF08402 TOBE domain V060002_RS12455 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS12460 PF12849 PBP superfamily domain V060002_RS12465 PF00158 Sigma-54 interaction domain V060002_RS12465 PF02954 Bacterial regulatory protein, Fis family V060002_RS12465 PF00072 Response regulator receiver domain V060002_RS12470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS12470 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS12470 PF00989 PAS fold V060002_RS12475 PF12848 ABC transporter V060002_RS12475 PF00005 ABC transporter V060002_RS12480 PF02634 FdhD/NarQ family V060002_RS12500 PF02613 Nitrate reductase delta subunit V060002_RS12510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain V060002_RS12510 PF01568 Molydopterin dinucleotide binding domain V060002_RS12510 PF00384 Molybdopterin oxidoreductase V060002_RS12515 PF13247 4Fe-4S dicluster domain V060002_RS12530 PF02146 Sir2 family V060002_RS12535 PF04461 Protein of unknown function (DUF520) V060002_RS12540 PF00793 DAHP synthetase I family V060002_RS12555 PF13509 S1 domain V060002_RS12555 PF17783 CvfB-like winged helix domain V060002_RS12560 PF01189 16S rRNA methyltransferase RsmB/F V060002_RS12560 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF V060002_RS12560 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF V060002_RS12565 PF02470 MlaD protein V060002_RS12570 PF04403 Paraquat-inducible protein A V060002_RS12575 PF00005 ABC transporter V060002_RS12575 PF00664 ABC transporter transmembrane region V060002_RS12580 PF13185 GAF domain V060002_RS12585 PF17516 ProQ C-terminal domain V060002_RS12585 PF04352 ProQ/FINO family V060002_RS12590 PF17804 Tail specific protease N-terminal domain V060002_RS12590 PF11818 C-terminal domain of tail specific protease (DUF3340) V060002_RS12590 PF00595 PDZ domain V060002_RS12590 PF03572 Peptidase family S41 V060002_RS12600 PF01433 Peptidase family M1 domain V060002_RS12600 PF17432 Domain of unknown function (DUF3458_C) ARM repeats V060002_RS12600 PF11940 Domain of unknown function (DUF3458) Ig-like fold V060002_RS12610 PF05088 Bacterial NAD-glutamate dehydrogenase V060002_RS12615 PF01180 Dihydroorotate dehydrogenase V060002_RS12620 PF07126 Cell-division protein ZapC V060002_RS12625 PF10672 S-adenosylmethionine-dependent methyltransferase V060002_RS12625 PF02926 THUMP domain V060002_RS12625 PF01170 Putative RNA methylase family UPF0020 V060002_RS12635 PF12848 ABC transporter V060002_RS12635 PF16326 ABC transporter C-terminal domain V060002_RS12635 PF00005 ABC transporter V060002_RS12645 PF04957 Ribosome modulation factor V060002_RS12650 PF07977 FabA-like domain V060002_RS12655 PF05362 Lon protease (S16) C-terminal proteolytic domain V060002_RS12655 PF13654 AAA domain V060002_RS12660 PF17414 MatP C-terminal ribbon-helix-helix domain V060002_RS12660 PF06303 MatP N-terminal domain V060002_RS12675 PF16671 Actin cross-linking domain V060002_RS12675 PF12146 Serine aminopeptidase, S33 V060002_RS12675 PF11647 Membrane Localization Domain V060002_RS12675 PF11713 Peptidase C80 family V060002_RS12675 PF07634 RtxA repeat V060002_RS12680 PF02794 RTX toxin acyltransferase family V060002_RS12690 PF00005 ABC transporter V060002_RS12690 PF03412 Peptidase C39 family V060002_RS12690 PF00664 ABC transporter transmembrane region V060002_RS12700 PF00005 ABC transporter V060002_RS12700 PF00664 ABC transporter transmembrane region V060002_RS12700 PF03412 Peptidase C39 family V060002_RS12705 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS12705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS12705 PF00072 Response regulator receiver domain V060002_RS12705 PF09308 LuxQ, periplasmic V060002_RS12720 PF00115 Cytochrome C and Quinol oxidase polypeptide I V060002_RS12735 PF13442 Cytochrome C oxidase, cbb3-type, subunit III V060002_RS12735 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP V060002_RS12745 PF00403 Heavy-metal-associated domain V060002_RS12760 PF13545 Crp-like helix-turn-helix domain V060002_RS12760 PF00027 Cyclic nucleotide-binding domain V060002_RS12765 PF00582 Universal stress protein family V060002_RS12770 PF01171 PP-loop family V060002_RS12790 PF00005 ABC transporter V060002_RS12790 PF08402 TOBE domain V060002_RS12795 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS12800 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS12805 PF13416 Bacterial extracellular solute-binding protein V060002_RS12810 PF13416 Bacterial extracellular solute-binding protein V060002_RS12825 PF01235 Sodium:alanine symporter family V060002_RS12830 PF01810 LysE type translocator V060002_RS12845 PF01764 Lipase (class 3) V060002_RS12855 PF04717 Type VI secretion system, phage-baseplate injector V060002_RS12855 PF16671 Actin cross-linking domain V060002_RS12860 PF05638 Type VI secretion system effector, Hcp V060002_RS12865 PF02074 Carboxypeptidase Taq (M32) metallopeptidase V060002_RS12870 PF02743 Cache domain V060002_RS12870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS12870 PF00672 HAMP domain V060002_RS12875 PF07690 Major Facilitator Superfamily V060002_RS12880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V060002_RS12880 PF00529 HlyD membrane-fusion protein of T1SS V060002_RS12885 PF02321 Outer membrane efflux protein V060002_RS12895 PF00270 DEAD/DEAH box helicase V060002_RS12895 PF00271 Helicase conserved C-terminal domain V060002_RS12900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS12900 PF13426 PAS domain V060002_RS12900 PF08447 PAS fold V060002_RS12905 PF12729 Four helix bundle sensory module for signal transduction V060002_RS12905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS12905 PF00672 HAMP domain V060002_RS12910 PF00672 HAMP domain V060002_RS12910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS12910 PF17202 Single cache domain 3 V060002_RS12915 PF01584 CheW-like domain V060002_RS12920 PF00072 Response regulator receiver domain V060002_RS12920 PF01339 CheB methylesterase V060002_RS12930 PF01739 CheR methyltransferase, SAM binding domain V060002_RS12930 PF03705 CheR methyltransferase, all-alpha domain V060002_RS12935 PF01584 CheW-like domain V060002_RS12935 PF01627 Hpt domain V060002_RS12935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS12935 PF02895 Signal transducing histidine kinase, homodimeric domain V060002_RS12935 PF00072 Response regulator receiver domain V060002_RS12940 PF07194 P2 response regulator binding domain V060002_RS12940 PF01627 Hpt domain V060002_RS12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS12940 PF02895 Signal transducing histidine kinase, homodimeric domain V060002_RS12940 PF01584 CheW-like domain V060002_RS12950 PF00072 Response regulator receiver domain V060002_RS12955 PF00672 HAMP domain V060002_RS12955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS12960 PF00893 Small Multidrug Resistance protein V060002_RS12965 PF03441 FAD binding domain of DNA photolyase V060002_RS12965 PF00875 DNA photolyase V060002_RS12970 PF07690 Major Facilitator Superfamily V060002_RS12975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS12975 PF03466 LysR substrate binding domain V060002_RS12985 PF10437 Bacterial lipoate protein ligase C-terminus V060002_RS12985 PF03099 Biotin/lipoate A/B protein ligase family V060002_RS12990 PF00012 Hsp70 protein V060002_RS13000 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold V060002_RS13000 PF00271 Helicase conserved C-terminal domain V060002_RS13000 PF00270 DEAD/DEAH box helicase V060002_RS13000 PF11898 Domain of unknown function (DUF3418) V060002_RS13000 PF04408 Helicase associated domain (HA2) V060002_RS13025 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS13025 PF00563 EAL domain V060002_RS13025 PF03707 Bacterial signalling protein N terminal repeat V060002_RS13040 PF00012 Hsp70 protein V060002_RS13045 PF00012 Hsp70 protein V060002_RS13050 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS13050 PF17158 Membrane-associated sensor, integral membrane domain V060002_RS13060 PF00563 EAL domain V060002_RS13060 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS13060 PF03707 Bacterial signalling protein N terminal repeat V060002_RS13080 PF06508 Queuosine biosynthesis protein QueC V060002_RS13085 PF04055 Radical SAM superfamily V060002_RS13100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V060002_RS13100 PF14824 Sirohaem biosynthesis protein central V060002_RS13100 PF10414 Sirohaem synthase dimerisation region V060002_RS13105 PF00497 Bacterial extracellular solute-binding proteins, family 3 V060002_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS13120 PF00005 ABC transporter V060002_RS13125 PF01027 Inhibitor of apoptosis-promoting Bax1 V060002_RS13130 PF04358 DsrC like protein V060002_RS13135 PF00708 Acylphosphatase V060002_RS13140 PF17785 PUA-like domain V060002_RS13140 PF10672 S-adenosylmethionine-dependent methyltransferase V060002_RS13145 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS13155 PF00462 Glutaredoxin V060002_RS13155 PF08534 Redoxin V060002_RS13160 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS13160 PF01627 Hpt domain V060002_RS13160 PF00072 Response regulator receiver domain V060002_RS13160 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) V060002_RS13160 PF00672 HAMP domain V060002_RS13165 PF00072 Response regulator receiver domain V060002_RS13170 PF14497 Glutathione S-transferase, C-terminal domain V060002_RS13170 PF02798 Glutathione S-transferase, N-terminal domain V060002_RS13180 PF04209 homogentisate 1,2-dioxygenase V060002_RS13185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V060002_RS13190 PF07687 Peptidase dimerisation domain V060002_RS13190 PF01546 Peptidase family M20/M25/M40 V060002_RS13205 PF00501 AMP-binding enzyme V060002_RS13205 PF16177 Acetyl-coenzyme A synthetase N-terminus V060002_RS13205 PF13193 AMP-binding enzyme C-terminal domain V060002_RS13210 PF04303 PrpF protein V060002_RS13215 PF00694 Aconitase C-terminal domain V060002_RS13215 PF00330 Aconitase family (aconitate hydratase) V060002_RS13220 PF00285 Citrate synthase, C-terminal domain V060002_RS13230 PF00392 Bacterial regulatory proteins, gntR family V060002_RS13230 PF07729 FCD domain V060002_RS13245 PF01970 Tripartite tricarboxylate transporter TctA family V060002_RS13260 PF02653 Branched-chain amino acid transport system / permease component V060002_RS13265 PF00005 ABC transporter V060002_RS13270 PF13407 Periplasmic binding protein domain V060002_RS13295 PF00072 Response regulator receiver domain V060002_RS13295 PF00486 Transcriptional regulatory protein, C terminal V060002_RS13300 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS13300 PF00672 HAMP domain V060002_RS13300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS13305 PF06629 MltA-interacting protein MipA V060002_RS13310 PF04393 Protein of unknown function (DUF535) V060002_RS13315 PF02954 Bacterial regulatory protein, Fis family V060002_RS13315 PF00072 Response regulator receiver domain V060002_RS13315 PF00158 Sigma-54 interaction domain V060002_RS13320 PF00497 Bacterial extracellular solute-binding proteins, family 3 V060002_RS13320 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS13320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS13325 PF00939 Sodium:sulfate symporter transmembrane region V060002_RS13330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS13330 PF00672 HAMP domain V060002_RS13335 PF00842 Alanine racemase, C-terminal domain V060002_RS13335 PF01168 Alanine racemase, N-terminal domain V060002_RS13340 PF00892 EamA-like transporter family V060002_RS13355 PF13302 Acetyltransferase (GNAT) domain V060002_RS13360 PF18024 Helix-turn-helix domain V060002_RS13360 PF00158 Sigma-54 interaction domain V060002_RS13365 PF05128 Domain of unknown function (DUF697) V060002_RS13370 PF04317 YcjX-like family, DUF463 V060002_RS13385 PF00425 chorismate binding enzyme V060002_RS13385 PF04715 Anthranilate synthase component I, N terminal region V060002_RS13390 PF00293 NUDIX domain V060002_RS13395 PF03222 Tryptophan/tyrosine permease family V060002_RS13400 PF03315 Serine dehydratase beta chain V060002_RS13400 PF03313 Serine dehydratase alpha chain V060002_RS13405 PF01242 6-pyruvoyl tetrahydropterin synthase V060002_RS13410 PF00672 HAMP domain V060002_RS13410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS13415 PF01336 OB-fold nucleic acid binding domain V060002_RS13415 PF00152 tRNA synthetases class II (D, K and N) V060002_RS13420 PF08543 Phosphomethylpyrimidine kinase V060002_RS13425 PF01966 HD domain V060002_RS13425 PF00672 HAMP domain V060002_RS13435 PF00155 Aminotransferase class I and II V060002_RS13450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS13450 PF17200 Single Cache domain 2 V060002_RS13450 PF00672 HAMP domain V060002_RS13455 PF04349 Periplasmic glucan biosynthesis protein, MdoG V060002_RS13460 PF13506 Glycosyl transferase family 21 V060002_RS13465 PF00356 Bacterial regulatory proteins, lacI family V060002_RS13470 PF04794 YdjC-like protein V060002_RS13475 PF02056 Family 4 glycosyl hydrolase V060002_RS13475 PF11975 Family 4 glycosyl hydrolase C-terminal domain V060002_RS13480 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit V060002_RS13485 PF02378 Phosphotransferase system, EIIC V060002_RS13490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit V060002_RS13495 PF01522 Polysaccharide deacetylase V060002_RS13500 PF02028 BCCT, betaine/carnitine/choline family transporter V060002_RS13505 PF01047 MarR family V060002_RS13510 PF00196 Bacterial regulatory proteins, luxR family V060002_RS13510 PF00072 Response regulator receiver domain V060002_RS13515 PF07730 Histidine kinase V060002_RS13515 PF17200 Single Cache domain 2 V060002_RS13525 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component V060002_RS13535 PF03480 Bacterial extracellular solute-binding protein, family 7 V060002_RS13550 PF00753 Metallo-beta-lactamase superfamily V060002_RS13555 PF05951 Bacterial protein of unknown function (DUF882) V060002_RS13560 PF03734 L,D-transpeptidase catalytic domain V060002_RS13560 PF01471 Putative peptidoglycan binding domain V060002_RS13585 PF00925 GTP cyclohydrolase II V060002_RS13595 PF07690 Major Facilitator Superfamily V060002_RS13605 PF00581 Rhodanese-like domain V060002_RS13605 PF17773 UPF0176 acylphosphatase like domain V060002_RS13610 PF03989 DNA gyrase C-terminal domain, beta-propeller V060002_RS13610 PF00521 DNA gyrase/topoisomerase IV, subunit A V060002_RS13620 PF02867 Ribonucleotide reductase, barrel domain V060002_RS13620 PF03477 ATP cone domain V060002_RS13620 PF00317 Ribonucleotide reductase, all-alpha domain V060002_RS13625 PF00268 Ribonucleotide reductase, small chain V060002_RS13630 PF00111 2Fe-2S iron-sulfur cluster binding domain V060002_RS13630 PF00175 Oxidoreductase NAD-binding domain V060002_RS13630 PF00970 Oxidoreductase FAD-binding domain V060002_RS13645 PF00994 Probable molybdopterin binding domain V060002_RS13660 PF17200 Single Cache domain 2 V060002_RS13660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS13660 PF00672 HAMP domain V060002_RS13675 PF00005 ABC transporter V060002_RS13680 PF01032 FecCD transport family V060002_RS13685 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family V060002_RS13695 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase V060002_RS13700 PF02654 Cobalamin-5-phosphate synthase V060002_RS13705 PF02277 Phosphoribosyltransferase V060002_RS13715 PF01641 SelR domain V060002_RS13720 PF00375 Sodium:dicarboxylate symporter family V060002_RS13725 PF00929 Exonuclease V060002_RS13725 PF08411 Exonuclease C-terminal V060002_RS13730 PF03788 LrgA family V060002_RS13735 PF04172 LrgB-like family V060002_RS13740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region V060002_RS13740 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region V060002_RS13750 PF02222 ATP-grasp domain V060002_RS13760 PF05724 Thiopurine S-methyltransferase (TPMT) V060002_RS13775 PF00216 Bacterial DNA-binding protein V060002_RS13780 PF03483 B3/4 domain V060002_RS13780 PF03484 tRNA synthetase B5 domain V060002_RS13780 PF03147 Ferredoxin-fold anticodon binding domain V060002_RS13780 PF01588 Putative tRNA binding domain V060002_RS13780 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain V060002_RS13785 PF01409 tRNA synthetases class II core domain (F) V060002_RS13785 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain V060002_RS13795 PF00072 Response regulator receiver domain V060002_RS13795 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS13820 PF01066 CDP-alcohol phosphatidyltransferase V060002_RS13825 PF01541 GIY-YIG catalytic domain V060002_RS13825 PF02151 UvrB/uvrC motif V060002_RS13825 PF08459 UvrC Helix-hairpin-helix N-terminal V060002_RS13830 PF00072 Response regulator receiver domain V060002_RS13830 PF00196 Bacterial regulatory proteins, luxR family V060002_RS13835 PF03104 DNA polymerase family B, exonuclease domain V060002_RS13835 PF00136 DNA polymerase family B V060002_RS13840 PF00563 EAL domain V060002_RS13840 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS13840 PF13426 PAS domain V060002_RS13850 PF01132 Elongation factor P (EF-P) OB domain V060002_RS13850 PF08207 Elongation factor P (EF-P) KOW-like domain V060002_RS13850 PF09285 Elongation factor P, C-terminal V060002_RS13855 PF04269 Protein of unknown function, DUF440 V060002_RS13865 PF07702 UTRA domain V060002_RS13865 PF00392 Bacterial regulatory proteins, gntR family V060002_RS13870 PF01979 Amidohydrolase family V060002_RS13875 PF00491 Arginase family V060002_RS13880 PF17391 Urocanase N-terminal domain V060002_RS13880 PF01175 Urocanase Rossmann-like domain V060002_RS13880 PF17392 Urocanase C-terminal domain V060002_RS13885 PF00221 Aromatic amino acid lyase V060002_RS13895 PF00089 Trypsin V060002_RS13900 PF04191 Phospholipid methyltransferase V060002_RS13905 PF13183 4Fe-4S dicluster domain V060002_RS13905 PF01565 FAD binding domain V060002_RS13905 PF02913 FAD linked oxidases, C-terminal domain V060002_RS13920 PF13488 Glycine zipper V060002_RS13920 PF00691 OmpA family V060002_RS13940 PF01259 SAICAR synthetase V060002_RS13950 PF03949 Malic enzyme, NAD binding domain V060002_RS13950 PF00390 Malic enzyme, N-terminal domain V060002_RS13960 PF02698 DUF218 domain V060002_RS13965 PF08448 PAS fold V060002_RS13965 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS13970 PF00266 Aminotransferase class-V V060002_RS13980 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS13985 PF00664 ABC transporter transmembrane region V060002_RS13985 PF00005 ABC transporter V060002_RS13990 PF00664 ABC transporter transmembrane region V060002_RS13990 PF00005 ABC transporter V060002_RS13995 PF01479 S4 domain V060002_RS13995 PF00849 RNA pseudouridylate synthase V060002_RS14000 PF01300 Telomere recombination V060002_RS14005 PF02811 PHP domain V060002_RS14010 PF08056 Tryptophan operon leader peptide V060002_RS14015 PF04715 Anthranilate synthase component I, N terminal region V060002_RS14015 PF00425 chorismate binding enzyme V060002_RS14020 PF00117 Glutamine amidotransferase class-I V060002_RS14025 PF00591 Glycosyl transferase family, a/b domain V060002_RS14025 PF02885 Glycosyl transferase family, helical bundle domain V060002_RS14030 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase V060002_RS14030 PF00218 Indole-3-glycerol phosphate synthase V060002_RS14035 PF00291 Pyridoxal-phosphate dependent enzyme V060002_RS14040 PF00290 Tryptophan synthase alpha chain V060002_RS14045 PF00375 Sodium:dicarboxylate symporter family V060002_RS14050 PF00265 Thymidine kinase V060002_RS14055 PF00152 tRNA synthetases class II (D, K and N) V060002_RS14055 PF01336 OB-fold nucleic acid binding domain V060002_RS14055 PF02938 GAD domain V060002_RS14060 PF01904 Protein of unknown function DUF72 V060002_RS14065 PF13649 Methyltransferase domain V060002_RS14070 PF08003 Protein of unknown function (DUF1698) V060002_RS14075 PF18030 RimK PreATP-grasp domain V060002_RS14075 PF08443 RimK-like ATP-grasp domain V060002_RS14090 PF00266 Aminotransferase class-V V060002_RS14100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS14100 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS14100 PF00989 PAS fold V060002_RS14115 PF04993 TfoX N-terminal domain V060002_RS14115 PF04994 TfoX C-terminal domain V060002_RS14125 PF03956 Lysine exporter LysO V060002_RS14135 PF00282 Pyridoxal-dependent decarboxylase conserved domain V060002_RS14140 PF01418 Helix-turn-helix domain, rpiR family V060002_RS14140 PF01380 SIS domain V060002_RS14145 PF00171 Aldehyde dehydrogenase family V060002_RS14145 PF00465 Iron-containing alcohol dehydrogenase V060002_RS14150 PF00462 Glutaredoxin V060002_RS14155 PF02080 TrkA-C domain V060002_RS14155 PF06826 Predicted Permease Membrane Region V060002_RS14160 PF10431 C-terminal, D2-small domain, of ClpB protein V060002_RS14160 PF02861 Clp amino terminal domain, pathogenicity island component V060002_RS14160 PF17871 AAA lid domain V060002_RS14160 PF07724 AAA domain (Cdc48 subfamily) V060002_RS14160 PF00004 ATPase family associated with various cellular activities (AAA) V060002_RS14165 PF02617 ATP-dependent Clp protease adaptor protein ClpS V060002_RS14170 PF00313 'Cold-shock' DNA-binding domain V060002_RS14175 PF03971 Monomeric isocitrate dehydrogenase V060002_RS14180 PF00849 RNA pseudouridylate synthase V060002_RS14185 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase V060002_RS14185 PF01502 Phosphoribosyl-AMP cyclohydrolase V060002_RS14190 PF00977 Histidine biosynthesis protein V060002_RS14195 PF00977 Histidine biosynthesis protein V060002_RS14200 PF00117 Glutamine amidotransferase class-I V060002_RS14205 PF00475 Imidazoleglycerol-phosphate dehydratase V060002_RS14205 PF08645 Polynucleotide kinase 3 phosphatase V060002_RS14210 PF00155 Aminotransferase class I and II V060002_RS14215 PF00815 Histidinol dehydrogenase V060002_RS14220 PF08029 HisG, C-terminal domain V060002_RS14220 PF01634 ATP phosphoribosyltransferase V060002_RS14225 PF03553 Na+/H+ antiporter family V060002_RS14230 PF00816 H-NS histone family V060002_RS14235 PF00294 pfkB family carbohydrate kinase V060002_RS14245 PF04356 Protein of unknown function (DUF489) V060002_RS14250 PF00206 Lyase V060002_RS14250 PF08328 Adenylosuccinate lyase C-terminal V060002_RS14260 PF16036 Chalcone isomerase-like V060002_RS14285 PF00106 short chain dehydrogenase V060002_RS14295 PF01435 Peptidase family M48 V060002_RS14310 PF08241 Methyltransferase domain V060002_RS14315 PF00155 Aminotransferase class I and II V060002_RS14320 PF06968 Biotin and Thiamin Synthesis associated domain V060002_RS14320 PF04055 Radical SAM superfamily V060002_RS14325 PF00202 Aminotransferase class-III V060002_RS14330 PF02403 Seryl-tRNA synthetase N-terminal domain V060002_RS14330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) V060002_RS14335 PF16193 AAA C-terminal domain V060002_RS14335 PF12002 MgsA AAA+ ATPase C terminal V060002_RS14335 PF00004 ATPase family associated with various cellular activities (AAA) V060002_RS14340 PF03548 Outer membrane lipoprotein carrier protein LolA V060002_RS14345 PF01043 SecA preprotein cross-linking domain V060002_RS14345 PF02810 SEC-C motif V060002_RS14345 PF07516 SecA Wing and Scaffold domain V060002_RS14345 PF07517 SecA DEAD-like domain V060002_RS14350 PF01207 Dihydrouridine synthase (Dus) V060002_RS14355 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS14360 PF00005 ABC transporter V060002_RS14365 PF02653 Branched-chain amino acid transport system / permease component V060002_RS14375 PF09905 DNA-binding protein VF530 V060002_RS14380 PF04217 Protein of unknown function, DUF412 V060002_RS14385 PF00871 Acetokinase family V060002_RS14390 PF07085 DRTGG domain V060002_RS14390 PF01515 Phosphate acetyl/butaryl transferase V060002_RS14395 PF13409 Glutathione S-transferase, N-terminal domain V060002_RS14400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V060002_RS14400 PF00005 ABC transporter V060002_RS14405 PF00005 ABC transporter V060002_RS14405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V060002_RS14410 PF12911 N-terminal TM domain of oligopeptide transport permease C V060002_RS14410 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS14415 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS14420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V060002_RS14430 PF00072 Response regulator receiver domain V060002_RS14430 PF13188 PAS domain V060002_RS14430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS14430 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS14430 PF08448 PAS fold V060002_RS14435 PF02954 Bacterial regulatory protein, Fis family V060002_RS14435 PF00072 Response regulator receiver domain V060002_RS14435 PF00158 Sigma-54 interaction domain V060002_RS14440 PF00563 EAL domain V060002_RS14440 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS14440 PF03707 Bacterial signalling protein N terminal repeat V060002_RS14440 PF13188 PAS domain V060002_RS14445 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS14445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS14450 PF13426 PAS domain V060002_RS14450 PF13188 PAS domain V060002_RS14450 PF00989 PAS fold V060002_RS14450 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS14460 PF00072 Response regulator receiver domain V060002_RS14475 PF01300 Telomere recombination V060002_RS14475 PF03481 Putative GTP-binding controlling metal-binding V060002_RS14495 PF01161 Phosphatidylethanolamine-binding protein V060002_RS14505 PF06483 Chitinase C V060002_RS14505 PF00704 Glycosyl hydrolases family 18 V060002_RS14520 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V060002_RS14520 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V060002_RS14525 PF01022 Bacterial regulatory protein, arsR family V060002_RS14535 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS14535 PF08448 PAS fold V060002_RS14545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain V060002_RS14560 PF01037 Lrp/AsnC ligand binding domain V060002_RS14560 PF13404 AsnC-type helix-turn-helix domain V060002_RS14565 PF00291 Pyridoxal-phosphate dependent enzyme V060002_RS14570 PF08496 Peptidase family S49 N-terminal V060002_RS14570 PF01343 Peptidase family S49 V060002_RS14575 PF00106 short chain dehydrogenase V060002_RS14580 PF03692 Putative zinc- or iron-chelating domain V060002_RS14585 PF03692 Putative zinc- or iron-chelating domain V060002_RS14590 PF13662 Toprim domain V060002_RS14590 PF02132 RecR protein V060002_RS14595 PF02575 YbaB/EbfC DNA-binding family V060002_RS14600 PF12169 DNA polymerase III subunits gamma and tau domain III V060002_RS14600 PF12170 DNA polymerase III tau subunit V interacting with alpha V060002_RS14600 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding V060002_RS14605 PF00156 Phosphoribosyl transferase domain V060002_RS14610 PF04304 Protein of unknown function (DUF454) V060002_RS14620 PF00072 Response regulator receiver domain V060002_RS14625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS14625 PF03466 LysR substrate binding domain V060002_RS14630 PF00881 Nitroreductase family V060002_RS14635 PF00378 Enoyl-CoA hydratase/isomerase V060002_RS14635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain V060002_RS14635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain V060002_RS14640 PF00108 Thiolase, N-terminal domain V060002_RS14640 PF02803 Thiolase, C-terminal domain V060002_RS14650 PF04542 Sigma-70 region 2 V060002_RS14650 PF08281 Sigma-70, region 4 V060002_RS14660 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) V060002_RS14665 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) V060002_RS14670 PF01451 Low molecular weight phosphotyrosine protein phosphatase V060002_RS14675 PF12557 Cob(I)alamin adenosyltransferase N terminal V060002_RS14675 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP V060002_RS14680 PF05170 AsmA family V060002_RS14685 PF00485 Phosphoribulokinase / Uridine kinase family V060002_RS14695 PF10609 NUBPL iron-transfer P-loop NTPase V060002_RS14700 PF09334 tRNA synthetases class I (M) V060002_RS14700 PF01588 Putative tRNA binding domain V060002_RS14710 PF01048 Phosphorylase superfamily V060002_RS14715 PF00403 Heavy-metal-associated domain V060002_RS14725 PF01743 Poly A polymerase head domain V060002_RS14725 PF00571 CBS domain V060002_RS14730 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS14730 PF07694 5TMR of 5TMR-LYT V060002_RS14735 PF02391 MoaE protein V060002_RS14740 PF02597 ThiS family V060002_RS14745 PF01967 MoaC family V060002_RS14750 PF00994 Probable molybdopterin binding domain V060002_RS14755 PF04055 Radical SAM superfamily V060002_RS14755 PF06463 Molybdenum Cofactor Synthesis C V060002_RS14760 PF01933 Uncharacterised protein family UPF0052 V060002_RS14765 PF01627 Hpt domain V060002_RS14770 PF00158 Sigma-54 interaction domain V060002_RS14770 PF02954 Bacterial regulatory protein, Fis family V060002_RS14770 PF00072 Response regulator receiver domain V060002_RS14780 PF00271 Helicase conserved C-terminal domain V060002_RS14780 PF04851 Type III restriction enzyme, res subunit V060002_RS14780 PF02151 UvrB/uvrC motif V060002_RS14780 PF17757 UvrB interaction domain V060002_RS14780 PF12344 Ultra-violet resistance protein B V060002_RS14790 PF02508 Rnf-Nqr subunit, membrane protein V060002_RS14795 PF04060 Putative Fe-S cluster V060002_RS14800 PF10531 SLBB domain V060002_RS14800 PF13375 RnfC Barrel sandwich hybrid domain V060002_RS14800 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit V060002_RS14800 PF12838 4Fe-4S dicluster domain V060002_RS14805 PF03116 NQR2, RnfD, RnfE family V060002_RS14810 PF04205 FMN-binding domain V060002_RS14815 PF02508 Rnf-Nqr subunit, membrane protein V060002_RS14820 PF00633 Helix-hairpin-helix motif V060002_RS14820 PF10576 Iron-sulfur binding domain of endonuclease III V060002_RS14820 PF00730 HhH-GPD superfamily base excision DNA repair protein V060002_RS14825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily V060002_RS14830 PF10952 Protein of unknown function (DUF2753) V060002_RS14835 PF00691 OmpA family V060002_RS14835 PF18393 MotY N-terminal domain V060002_RS14840 PF00929 Exonuclease V060002_RS14845 PF13726 Na+-H+ antiporter family V060002_RS14845 PF03553 Na+/H+ antiporter family V060002_RS14850 PF00156 Phosphoribosyl transferase domain V060002_RS14855 PF02674 Colicin V production protein V060002_RS14860 PF05036 Sporulation related domain V060002_RS14865 PF02875 Mur ligase family, glutamate ligase domain V060002_RS14865 PF08245 Mur ligase middle domain V060002_RS14870 PF17848 Acetyl-coA carboxylase zinc finger domain V060002_RS14870 PF01039 Carboxyl transferase domain V060002_RS14875 PF01416 tRNA pseudouridine synthase V060002_RS14885 PF00749 tRNA synthetases class I (E and Q), catalytic domain V060002_RS14885 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain V060002_RS14890 PF00367 phosphotransferase system, EIIB V060002_RS14890 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 V060002_RS14890 PF02378 Phosphotransferase system, EIIC V060002_RS14895 PF01979 Amidohydrolase family V060002_RS14900 PF01047 MarR family V060002_RS14900 PF00480 ROK family V060002_RS14905 PF00999 Sodium/hydrogen exchanger family V060002_RS14905 PF02254 TrkA-N domain V060002_RS14910 PF13537 Glutamine amidotransferase domain V060002_RS14910 PF00733 Asparagine synthase V060002_RS14915 PF02357 Transcription termination factor nusG V060002_RS14920 PF00854 POT family V060002_RS14925 PF00762 Ferrochelatase V060002_RS14930 PF05191 Adenylate kinase, active site lid V060002_RS14935 PF00183 Hsp90 protein V060002_RS14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS14945 PF17323 Trans-membrane regulatory protein ToxS V060002_RS14955 PF12850 Calcineurin-like phosphoesterase superfamily domain V060002_RS14960 PF01370 NAD dependent epimerase/dehydratase family V060002_RS14960 PF08338 Domain of unknown function (DUF1731) V060002_RS14965 PF00106 short chain dehydrogenase V060002_RS14975 PF00085 Thioredoxin V060002_RS14985 PF01145 SPFH domain / Band 7 family V060002_RS14985 PF16200 C-terminal region of band_7 V060002_RS14990 PF01957 NfeD-like C-terminal, partner-binding V060002_RS14995 PF13411 MerR HTH family regulatory protein V060002_RS15005 PF13609 Gram-negative porin V060002_RS15015 PF12826 Helix-hairpin-helix motif V060002_RS15015 PF03119 NAD-dependent DNA ligase C4 zinc finger domain V060002_RS15015 PF03120 NAD-dependent DNA ligase OB-fold domain V060002_RS15015 PF01653 NAD-dependent DNA ligase adenylation domain V060002_RS15015 PF00533 BRCA1 C Terminus (BRCT) domain V060002_RS15020 PF04354 ZipA, C-terminal FtsZ-binding domain V060002_RS15030 PF00291 Pyridoxal-phosphate dependent enzyme V060002_RS15040 PF00381 PTS HPr component phosphorylation site V060002_RS15045 PF00391 PEP-utilising enzyme, mobile domain V060002_RS15045 PF05524 PEP-utilising enzyme, N-terminal V060002_RS15045 PF02896 PEP-utilising enzyme, TIM barrel domain V060002_RS15050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 V060002_RS15055 PF01494 FAD binding domain V060002_RS15060 PF00919 Uncharacterized protein family UPF0004 V060002_RS15060 PF01938 TRAM domain V060002_RS15060 PF04055 Radical SAM superfamily V060002_RS15065 PF02562 PhoH-like protein V060002_RS15070 PF02130 Uncharacterized protein family UPF0054 V060002_RS15075 PF00571 CBS domain V060002_RS15075 PF03471 Transporter associated domain V060002_RS15080 PF00795 Carbon-nitrogen hydrolase V060002_RS15085 PF07295 Zinc-ribbon containing domain V060002_RS15090 PF13603 Leucyl-tRNA synthetase, Domain 2 V060002_RS15090 PF00133 tRNA synthetases class I (I, L, M and V) V060002_RS15090 PF08264 Anticodon-binding domain of tRNA V060002_RS15095 PF04390 Lipopolysaccharide-assembly V060002_RS15100 PF06144 DNA polymerase III, delta subunit V060002_RS15100 PF14840 Processivity clamp loader gamma complex DNA pol III C-term V060002_RS15110 PF02590 Predicted SPOUT methyltransferase V060002_RS15115 PF03717 Penicillin-binding Protein dimerisation domain V060002_RS15115 PF00905 Penicillin binding protein transpeptidase domain V060002_RS15120 PF01098 Cell cycle protein V060002_RS15125 PF03330 Lytic transglycolase V060002_RS15125 PF05036 Sporulation related domain V060002_RS15130 PF00768 D-alanyl-D-alanine carboxypeptidase V060002_RS15130 PF07943 Penicillin-binding protein 5, C-terminal domain V060002_RS15135 PF04359 Protein of unknown function (DUF493) V060002_RS15140 PF03099 Biotin/lipoate A/B protein ligase family V060002_RS15145 PF04055 Radical SAM superfamily V060002_RS15145 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family V060002_RS15155 PF00464 Serine hydroxymethyltransferase V060002_RS15175 PF02706 Chain length determinant protein V060002_RS15175 PF13807 G-rich domain on putative tyrosine kinase V060002_RS15175 PF13614 AAA domain V060002_RS15180 PF02563 Polysaccharide biosynthesis/export protein V060002_RS15180 PF10531 SLBB domain V060002_RS15180 PF18412 Outer-membrane lipoprotein Wza C-terminal domain V060002_RS15190 PF02397 Bacterial sugar transferase V060002_RS15205 PF17945 Beta/Gamma crystallin V060002_RS15205 PF12561 ToxR activated gene A lipoprotein domain V060002_RS15220 PF03808 Glycosyl transferase WecB/TagA/CpsF family V060002_RS15230 PF00862 Sucrose synthase V060002_RS15230 PF00534 Glycosyl transferases group 1 V060002_RS15240 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS15260 PF12464 Maltose acetyltransferase V060002_RS15260 PF14602 Hexapeptide repeat of succinyl-transferase V060002_RS15265 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain V060002_RS15265 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain V060002_RS15265 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain V060002_RS15270 PF02350 UDP-N-acetylglucosamine 2-epimerase V060002_RS15275 PF01451 Low molecular weight phosphotyrosine protein phosphatase V060002_RS15280 PF00873 AcrB/AcrD/AcrF family V060002_RS15285 PF13533 Biotin-lipoyl like V060002_RS15310 PF16657 Maltogenic Amylase, C-terminal domain V060002_RS15310 PF00128 Alpha amylase, catalytic domain V060002_RS15315 PF00367 phosphotransferase system, EIIB V060002_RS15315 PF02378 Phosphotransferase system, EIIC V060002_RS15320 PF00356 Bacterial regulatory proteins, lacI family V060002_RS15330 PF00005 ABC transporter V060002_RS15330 PF09383 NIL domain V060002_RS15335 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS15340 PF03180 NLPA lipoprotein V060002_RS15345 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) V060002_RS15350 PF07348 Syd protein (SUKH-2) V060002_RS15355 PF14489 QueF-like protein V060002_RS15355 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term V060002_RS15365 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS15370 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases V060002_RS15370 PF11892 Domain of unknown function (DUF3412) V060002_RS15370 PF03641 Possible lysine decarboxylase V060002_RS15375 PF01367 5'-3' exonuclease, C-terminal SAM fold V060002_RS15375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain V060002_RS15380 PF04241 Protein of unknown function (DUF423) V060002_RS15385 PF03466 LysR substrate binding domain V060002_RS15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS15390 PF02568 Thiamine biosynthesis protein (ThiI) V060002_RS15390 PF02926 THUMP domain V060002_RS15395 PF13677 Membrane MotB of proton-channel complex MotA/MotB V060002_RS15395 PF00691 OmpA family V060002_RS15400 PF01618 MotA/TolQ/ExbB proton channel family V060002_RS15405 PF02609 Exonuclease VII small subunit V060002_RS15410 PF00348 Polyprenyl synthetase V060002_RS15415 PF02780 Transketolase, C-terminal domain V060002_RS15415 PF13292 1-deoxy-D-xylulose-5-phosphate synthase V060002_RS15415 PF02779 Transketolase, pyrimidine binding domain V060002_RS15420 PF00849 RNA pseudouridylate synthase V060002_RS15425 PF04287 tRNA pseudouridine synthase C V060002_RS15440 PF13302 Acetyltransferase (GNAT) domain V060002_RS15450 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 V060002_RS15455 PF03806 AbgT putative transporter family V060002_RS15460 PF00444 Ribosomal protein L36 V060002_RS15465 PF01197 Ribosomal protein L31 V060002_RS15470 PF01980 tRNA-methyltransferase O V060002_RS15470 PF18389 TrmO C-terminal domain V060002_RS15475 PF03129 Anticodon binding domain V060002_RS15475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) V060002_RS15475 PF04073 Aminoacyl-tRNA editing domain V060002_RS15490 PF06786 Uncharacterised protein family (UPF0253) V060002_RS15500 PF01797 Transposase IS200 like V060002_RS15505 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal V060002_RS15505 PF02769 AIR synthase related protein, C-terminal domain V060002_RS15505 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain V060002_RS15515 PF00497 Bacterial extracellular solute-binding proteins, family 3 V060002_RS15515 PF01464 Transglycosylase SLT domain V060002_RS15520 PF14437 MafB19-like deaminase V060002_RS15525 PF03806 AbgT putative transporter family V060002_RS15550 PF07963 Prokaryotic N-terminal methylation motif V060002_RS15550 PF14245 Type IV pilin PilA V060002_RS15555 PF07963 Prokaryotic N-terminal methylation motif V060002_RS15555 PF00114 Pilin (bacterial filament) V060002_RS15560 PF01556 DnaJ C terminal domain V060002_RS15560 PF00684 DnaJ central domain V060002_RS15560 PF00226 DnaJ domain V060002_RS15565 PF00012 Hsp70 protein V060002_RS15570 PF01025 GrpE V060002_RS15575 PF01513 ATP-NAD kinase V060002_RS15580 PF02463 RecF/RecN/SMC N terminal domain V060002_RS15585 PF04355 SmpA / OmlA family V060002_RS15590 PF03658 RnfH family Ubiquitin V060002_RS15595 PF03364 Polyketide cyclase / dehydrase and lipid transport V060002_RS15600 PF01668 SmpB protein V060002_RS15610 PF13356 Arm DNA-binding domain V060002_RS15610 PF00589 Phage integrase family V060002_RS15620 PF00589 Phage integrase family V060002_RS15620 PF13356 Arm DNA-binding domain V060002_RS15625 PF17291 N-terminal domain of M60-like peptidases V060002_RS15625 PF13402 Peptidase M60, enhancin and enhancin-like V060002_RS15625 PF13322 Domain of unknown function (DUF4092) V060002_RS15635 PF01551 Peptidase family M23 V060002_RS15635 PF04225 Opacity-associated protein A LysM-like domain V060002_RS15650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS15650 PF00672 HAMP domain V060002_RS15650 PF02743 Cache domain V060002_RS15655 PF01478 Type IV leader peptidase family V060002_RS15655 PF06750 Bacterial Peptidase A24 N-terminal domain V060002_RS15660 PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family V060002_RS15665 PF06340 Vibrio cholerae toxin co-regulated pilus biosynthesis protein F V060002_RS15670 PF00482 Type II secretion system (T2SS), protein F V060002_RS15675 PF00437 Type II/IV secretion system protein V060002_RS15680 PF17456 Toxin-coregulated pilus protein S V060002_RS15700 PF10671 Toxin co-regulated pilus biosynthesis protein Q V060002_RS15710 PF05946 Toxin-coregulated pilus subunit TcpA V060002_RS15710 PF07963 Prokaryotic N-terminal methylation motif V060002_RS15720 PF00486 Transcriptional regulatory protein, C terminal V060002_RS15725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS15730 PF08534 Redoxin V060002_RS15745 PF12561 ToxR activated gene A lipoprotein domain V060002_RS15745 PF00041 Fibronectin type III domain V060002_RS15750 PF00171 Aldehyde dehydrogenase family V060002_RS15820 PF00037 4Fe-4S binding domain V060002_RS15820 PF11953 Domain of unknown function (DUF3470) V060002_RS15825 PF00588 SpoU rRNA Methylase family V060002_RS15825 PF08032 RNA 2'-O ribose methyltransferase substrate binding V060002_RS15835 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase V060002_RS15840 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase V060002_RS15845 PF04223 Citrate lyase, alpha subunit (CitF) V060002_RS15850 PF03328 HpcH/HpaI aldolase/citrate lyase family V060002_RS15855 PF06857 Malonate decarboxylase delta subunit (MdcD) V060002_RS15860 PF08218 Citrate lyase ligase C-terminal domain V060002_RS15865 PF03390 2-hydroxycarboxylate transporter family V060002_RS15870 PF04277 Oxaloacetate decarboxylase, gamma chain V060002_RS15875 PF00682 HMGL-like V060002_RS15875 PF02436 Conserved carboxylase domain V060002_RS15875 PF00364 Biotin-requiring enzyme V060002_RS15880 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit V060002_RS15885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS15885 PF17203 Single cache domain 3 V060002_RS15890 PF00072 Response regulator receiver domain V060002_RS15890 PF12431 Transcriptional regulator V060002_RS15905 PF03466 LysR substrate binding domain V060002_RS15905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS15910 PF01266 FAD dependent oxidoreductase V060002_RS15915 PF01235 Sodium:alanine symporter family V060002_RS15920 PF00753 Metallo-beta-lactamase superfamily V060002_RS15920 PF14864 Alkyl sulfatase C-terminal V060002_RS15920 PF14863 Alkyl sulfatase dimerisation V060002_RS15925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS15925 PF03466 LysR substrate binding domain V060002_RS15930 PF17837 4'-phosphopantetheinyl transferase N-terminal domain V060002_RS15930 PF01648 4'-phosphopantetheinyl transferase superfamily V060002_RS15935 PF00005 ABC transporter V060002_RS15940 PF01032 FecCD transport family V060002_RS15945 PF01032 FecCD transport family V060002_RS15950 PF01497 Periplasmic binding protein V060002_RS15965 PF00425 chorismate binding enzyme V060002_RS15970 PF00501 AMP-binding enzyme V060002_RS15970 PF13193 AMP-binding enzyme C-terminal domain V060002_RS15975 PF00857 Isochorismatase family V060002_RS15975 PF00550 Phosphopantetheine attachment site V060002_RS15980 PF01184 GPR1/FUN34/yaaH family V060002_RS15985 PF00704 Glycosyl hydrolases family 18 V060002_RS15985 PF06483 Chitinase C V060002_RS15990 PF00958 GMP synthase C terminal domain V060002_RS15990 PF00117 Glutamine amidotransferase class-I V060002_RS15990 PF02540 NAD synthase V060002_RS15995 PF00571 CBS domain V060002_RS15995 PF00478 IMP dehydrogenase / GMP reductase domain V060002_RS16000 PF13742 OB-fold nucleic acid binding domain V060002_RS16000 PF02601 Exonuclease VII, large subunit V060002_RS16015 PF01926 50S ribosome-binding GTPase V060002_RS16015 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal V060002_RS16020 PF13360 PQQ-like domain V060002_RS16025 PF09976 Tetratricopeptide repeat-like domain V060002_RS16030 PF03129 Anticodon binding domain V060002_RS16030 PF13393 Histidyl-tRNA synthetase V060002_RS16035 PF04551 GcpE protein V060002_RS16040 PF13464 Domain of unknown function (DUF4115) V060002_RS16045 PF04055 Radical SAM superfamily V060002_RS16050 PF00334 Nucleoside diphosphate kinase V060002_RS16055 PF00883 Cytosol aminopeptidase family, catalytic domain V060002_RS16055 PF12404 Peptidase V060002_RS16060 PF04384 Iron-sulphur cluster assembly V060002_RS16065 PF00111 2Fe-2S iron-sulfur cluster binding domain V060002_RS16070 PF00012 Hsp70 protein V060002_RS16075 PF00226 DnaJ domain V060002_RS16075 PF07743 HSCB C-terminal oligomerisation domain V060002_RS16080 PF01521 Iron-sulphur cluster biosynthesis V060002_RS16085 PF01592 NifU-like N terminal domain V060002_RS16090 PF00266 Aminotransferase class-V V060002_RS16095 PF02082 Transcriptional regulator V060002_RS16100 PF00588 SpoU rRNA Methylase family V060002_RS16105 PF00459 Inositol monophosphatase family V060002_RS16110 PF02355 Protein export membrane protein V060002_RS16110 PF07549 SecD/SecF GG Motif V060002_RS16115 PF02355 Protein export membrane protein V060002_RS16115 PF07549 SecD/SecF GG Motif V060002_RS16115 PF13721 SecD export protein N-terminal TM region V060002_RS16120 PF02699 Preprotein translocase subunit V060002_RS16125 PF01702 Queuine tRNA-ribosyltransferase V060002_RS16135 PF02547 Queuosine biosynthesis protein V060002_RS16140 PF00571 CBS domain V060002_RS16145 PF00463 Isocitrate lyase family V060002_RS16150 PF01274 Malate synthase V060002_RS16155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS16155 PF03466 LysR substrate binding domain V060002_RS16160 PF10417 C-terminal domain of 1-Cys peroxiredoxin V060002_RS16160 PF00578 AhpC/TSA family V060002_RS16165 PF03932 CutC family V060002_RS16170 PF03976 Polyphosphate kinase 2 (PPK2) V060002_RS16175 PF01895 PhoU domain V060002_RS16180 PF00005 ABC transporter V060002_RS16185 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS16190 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS16195 PF13090 Polyphosphate kinase C-terminal domain 2 V060002_RS16195 PF13089 Polyphosphate kinase N-terminal domain V060002_RS16195 PF17941 Polyphosphate kinase C-terminal domain 1 V060002_RS16195 PF02503 Polyphosphate kinase middle domain V060002_RS16200 PF02541 Ppx/GppA phosphatase family V060002_RS16205 PF12849 PBP superfamily domain V060002_RS16210 PF00989 PAS fold V060002_RS16210 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS16210 PF11808 Phosphate regulon sensor protein PhoR V060002_RS16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS16215 PF00486 Transcriptional regulatory protein, C terminal V060002_RS16215 PF00072 Response regulator receiver domain V060002_RS16220 PF04381 Putative exonuclease, RdgC V060002_RS16225 PF01136 Peptidase family U32 V060002_RS16225 PF16325 Peptidase family U32 C-terminal domain V060002_RS16230 PF00037 4Fe-4S binding domain V060002_RS16235 PF00881 Nitroreductase family V060002_RS16270 PF00004 ATPase family associated with various cellular activities (AAA) V060002_RS16270 PF07724 AAA domain (Cdc48 subfamily) V060002_RS16270 PF17871 AAA lid domain V060002_RS16270 PF02861 Clp amino terminal domain, pathogenicity island component V060002_RS16270 PF10431 C-terminal, D2-small domain, of ClpB protein V060002_RS16275 PF02578 Multi-copper polyphenol oxidoreductase laccase V060002_RS16280 PF01479 S4 domain V060002_RS16280 PF00849 RNA pseudouridylate synthase V060002_RS16285 PF13525 Outer membrane lipoprotein V060002_RS16290 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein V060002_RS16295 PF01817 Chorismate mutase type II V060002_RS16295 PF00800 Prephenate dehydratase V060002_RS16300 PF13416 Bacterial extracellular solute-binding protein V060002_RS16305 PF00563 EAL domain V060002_RS16305 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS16310 PF01931 Protein of unknown function DUF84 V060002_RS16315 PF01371 Trp repressor protein V060002_RS16320 PF14718 Soluble lytic murein transglycosylase L domain V060002_RS16320 PF01464 Transglycosylase SLT domain V060002_RS16325 PF12848 ABC transporter V060002_RS16325 PF00005 ABC transporter V060002_RS16330 PF07238 PilZ domain V060002_RS16335 PF01817 Chorismate mutase type II V060002_RS16335 PF02153 Prephenate dehydrogenase V060002_RS16340 PF00793 DAHP synthetase I family V060002_RS16345 PF06580 Histidine kinase V060002_RS16345 PF07694 5TMR of 5TMR-LYT V060002_RS16350 PF04397 LytTr DNA-binding domain V060002_RS16350 PF00072 Response regulator receiver domain V060002_RS16355 PF00933 Glycosyl hydrolase family 3 N terminal domain V060002_RS16360 PF03702 Anhydro-N-acetylmuramic acid kinase V060002_RS16365 PF13580 SIS domain V060002_RS16380 PF02554 Carbon starvation protein CstA V060002_RS16385 PF02401 LytB protein V060002_RS16390 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V060002_RS16395 PF01252 Signal peptidase (SPase) II V060002_RS16400 PF00133 tRNA synthetases class I (I, L, M and V) V060002_RS16400 PF08264 Anticodon-binding domain of tRNA V060002_RS16400 PF06827 Zinc finger found in FPG and IleRS V060002_RS16405 PF01687 Riboflavin kinase V060002_RS16405 PF06574 FAD synthetase V060002_RS16410 PF03023 Lipid II flippase MurJ V060002_RS16415 PF01649 Ribosomal protein S20 V060002_RS16420 PF01022 Bacterial regulatory protein, arsR family V060002_RS16425 PF03466 LysR substrate binding domain V060002_RS16425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS16430 PF02690 Na+/Pi-cotransporter V060002_RS16435 PF00303 Thymidylate synthase V060002_RS16440 PF01790 Prolipoprotein diacylglyceryl transferase V060002_RS16445 PF01925 Sulfite exporter TauE/SafE V060002_RS16450 PF05524 PEP-utilising enzyme, N-terminal V060002_RS16450 PF01590 GAF domain V060002_RS16450 PF00391 PEP-utilising enzyme, mobile domain V060002_RS16450 PF02896 PEP-utilising enzyme, TIM barrel domain V060002_RS16455 PF00293 NUDIX domain V060002_RS16460 PF02976 DNA mismatch repair enzyme MutH V060002_RS16465 PF00248 Aldo/keto reductase family V060002_RS16475 PF00072 Response regulator receiver domain V060002_RS16475 PF02954 Bacterial regulatory protein, Fis family V060002_RS16475 PF00158 Sigma-54 interaction domain V060002_RS16480 PF00152 tRNA synthetases class II (D, K and N) V060002_RS16480 PF01336 OB-fold nucleic acid binding domain V060002_RS16490 PF05525 Branched-chain amino acid transport protein V060002_RS16495 PF05175 Methyltransferase small domain V060002_RS16500 PF00271 Helicase conserved C-terminal domain V060002_RS16500 PF00270 DEAD/DEAH box helicase V060002_RS16505 PF00009 Elongation factor Tu GTP binding domain V060002_RS16505 PF03144 Elongation factor Tu domain 2 V060002_RS16505 PF16658 Class II release factor RF3, C-terminal domain V060002_RS16510 PF03707 Bacterial signalling protein N terminal repeat V060002_RS16510 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS16510 PF00563 EAL domain V060002_RS16525 PF13508 Acetyltransferase (GNAT) domain V060002_RS16530 PF02036 SCP-2 sterol transfer family V060002_RS16535 PF00563 EAL domain V060002_RS16535 PF03707 Bacterial signalling protein N terminal repeat V060002_RS16535 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS16540 PF01136 Peptidase family U32 V060002_RS16545 PF01136 Peptidase family U32 V060002_RS16560 PF07719 Tetratricopeptide repeat V060002_RS16560 PF13181 Tetratricopeptide repeat V060002_RS16565 PF00575 S1 RNA binding domain V060002_RS16565 PF03725 3' exoribonuclease family, domain 2 V060002_RS16565 PF01138 3' exoribonuclease family, domain 1 V060002_RS16565 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain V060002_RS16565 PF00013 KH domain V060002_RS16570 PF00312 Ribosomal protein S15 V060002_RS16575 PF16198 tRNA pseudouridylate synthase B C-terminal domain V060002_RS16575 PF09157 Pseudouridine synthase II TruB, C-terminal V060002_RS16575 PF01509 TruB family pseudouridylate synthase (N terminal domain) V060002_RS16580 PF02033 Ribosome-binding factor A V060002_RS16585 PF11987 Translation-initiation factor 2 V060002_RS16585 PF04760 Translation initiation factor IF-2, N-terminal region V060002_RS16585 PF08364 Bacterial translation initiation factor IF-2 associated region V060002_RS16585 PF00009 Elongation factor Tu GTP binding domain V060002_RS16590 PF13184 NusA-like KH domain V060002_RS16590 PF00575 S1 RNA binding domain V060002_RS16590 PF08529 NusA N-terminal domain V060002_RS16595 PF17384 RimP C-terminal SH3 domain V060002_RS16595 PF02576 RimP N-terminal domain V060002_RS16610 PF03840 Preprotein translocase SecG subunit V060002_RS16620 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III V060002_RS16620 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain V060002_RS16620 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II V060002_RS16620 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I V060002_RS16625 PF00809 Pterin binding enzyme V060002_RS16630 PF06480 FtsH Extracellular V060002_RS16630 PF01434 Peptidase family M41 V060002_RS16630 PF17862 AAA+ lid domain V060002_RS16630 PF00004 ATPase family associated with various cellular activities (AAA) V060002_RS16635 PF01728 FtsJ-like methyltransferase V060002_RS16640 PF01985 CRS1 / YhbY (CRM) domain V060002_RS16645 PF03449 Transcription elongation factor, N-terminal V060002_RS16645 PF01272 Transcription elongation factor, GreA/GreB, C-term V060002_RS16650 PF13609 Gram-negative porin V060002_RS16655 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family V060002_RS16660 PF01479 S4 domain V060002_RS16660 PF00579 tRNA synthetases class I (W and Y) V060002_RS16665 PF01551 Peptidase family M23 V060002_RS16665 PF04225 Opacity-associated protein A LysM-like domain V060002_RS16670 PF00873 AcrB/AcrD/AcrF family V060002_RS16680 PF01521 Iron-sulphur cluster biosynthesis V060002_RS16685 PF00202 Aminotransferase class-III V060002_RS16690 PF01594 AI-2E family transporter V060002_RS16695 PF05175 Methyltransferase small domain V060002_RS16695 PF08468 Methyltransferase small domain N-terminal V060002_RS16700 PF09308 LuxQ, periplasmic V060002_RS16700 PF00072 Response regulator receiver domain V060002_RS16700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS16700 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS16710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V060002_RS16715 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS16720 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS16720 PF12911 N-terminal TM domain of oligopeptide transport permease C V060002_RS16725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V060002_RS16725 PF00005 ABC transporter V060002_RS16730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V060002_RS16730 PF00005 ABC transporter V060002_RS16740 PF01869 BadF/BadG/BcrA/BcrD ATPase family V060002_RS16745 PF00728 Glycosyl hydrolase family 20, catalytic domain V060002_RS16745 PF02838 Glycosyl hydrolase family 20, domain 2 V060002_RS16750 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain V060002_RS16750 PF06165 Glycosyltransferase family 36 V060002_RS16755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II V060002_RS16755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I V060002_RS16755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III V060002_RS16755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain V060002_RS16760 PF08402 TOBE domain V060002_RS16760 PF00005 ABC transporter V060002_RS16770 PF13416 Bacterial extracellular solute-binding protein V060002_RS16775 PF00909 Ammonium Transporter Family V060002_RS16780 PF00543 Nitrogen regulatory protein P-II V060002_RS16785 PF06062 Uncharacterised protein family (UPF0231) V060002_RS16790 PF11791 Aconitate B N-terminal domain V060002_RS16790 PF06434 Aconitate hydratase 2 N-terminus V060002_RS16790 PF00330 Aconitase family (aconitate hydratase) V060002_RS16795 PF01734 Patatin-like phospholipase V060002_RS16800 PF14814 Bifunctional transglycosylase second domain V060002_RS16800 PF00905 Penicillin binding protein transpeptidase domain V060002_RS16800 PF00912 Transglycosylase V060002_RS16805 PF04408 Helicase associated domain (HA2) V060002_RS16805 PF00271 Helicase conserved C-terminal domain V060002_RS16805 PF00270 DEAD/DEAH box helicase V060002_RS16805 PF08482 ATP-dependent helicase C-terminal V060002_RS16815 PF03749 Sugar fermentation stimulation protein RE domain V060002_RS16815 PF17746 SfsA N-terminal OB domain V060002_RS16820 PF01258 Prokaryotic dksA/traR C4-type zinc finger V060002_RS16825 PF00749 tRNA synthetases class I (E and Q), catalytic domain V060002_RS16830 PF01743 Poly A polymerase head domain V060002_RS16830 PF12626 Polymerase A arginine-rich C-terminus V060002_RS16830 PF12627 Probable RNA and SrmB- binding site of polymerase A V060002_RS16835 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) V060002_RS16840 PF02548 Ketopantoate hydroxymethyltransferase V060002_RS16845 PF02569 Pantoate-beta-alanine ligase V060002_RS16850 PF01061 ABC-2 type transporter V060002_RS16855 PF00005 ABC transporter V060002_RS16860 PF01740 STAS domain V060002_RS16860 PF00916 Sulfate permease family V060002_RS16865 PF00484 Carbonic anhydrase V060002_RS16870 PF00156 Phosphoribosyl transferase domain V060002_RS16875 PF00440 Bacterial regulatory proteins, tetR family V060002_RS16885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases V060002_RS16890 PF04348 LppC putative lipoprotein V060002_RS16895 PF02021 Uncharacterised protein family UPF0102 V060002_RS16900 PF13580 SIS domain V060002_RS16905 PF04972 BON domain V060002_RS16910 PF04386 Stringent starvation protein B V060002_RS16915 PF00043 Glutathione S-transferase, C-terminal domain V060002_RS16915 PF02798 Glutathione S-transferase, N-terminal domain V060002_RS16920 PF02167 Cytochrome C1 family V060002_RS16925 PF00032 Cytochrome b(C-terminal)/b6/petD V060002_RS16925 PF00033 Cytochrome b/b6/petB V060002_RS16930 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal V060002_RS16930 PF00355 Rieske [2Fe-2S] domain V060002_RS16935 PF00380 Ribosomal protein S9/S16 V060002_RS16940 PF00572 Ribosomal protein L13 V060002_RS16945 PF03969 AFG1-like ATPase V060002_RS16955 PF00595 PDZ domain V060002_RS16960 PF13180 PDZ domain V060002_RS16965 PF01245 Ribosomal protein L19 V060002_RS16970 PF01746 tRNA (Guanine-1)-methyltransferase V060002_RS16975 PF05239 PRC-barrel domain V060002_RS16975 PF01782 RimM N-terminal domain V060002_RS16980 PF00886 Ribosomal protein S16 V060002_RS16985 PF02881 SRP54-type protein, helical bundle domain V060002_RS16985 PF02978 Signal peptide binding domain V060002_RS16985 PF00448 SRP54-type protein, GTPase domain V060002_RS16990 PF01578 Cytochrome C assembly protein V060002_RS16995 PF01595 Cyclin M transmembrane N-terminal domain V060002_RS16995 PF03471 Transporter associated domain V060002_RS16995 PF00571 CBS domain V060002_RS17000 PF02664 S-Ribosylhomocysteinase (LuxS) V060002_RS17005 PF04262 Glutamate-cysteine ligase V060002_RS17010 PF00675 Insulinase (Peptidase family M16) V060002_RS17010 PF05193 Peptidase M16 inactive domain V060002_RS17015 PF09335 SNARE associated Golgi protein V060002_RS17020 PF08240 Alcohol dehydrogenase GroES-like domain V060002_RS17020 PF00107 Zinc-binding dehydrogenase V060002_RS17025 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit V060002_RS17030 PF02436 Conserved carboxylase domain V060002_RS17030 PF00682 HMGL-like V060002_RS17030 PF00364 Biotin-requiring enzyme V060002_RS17035 PF04277 Oxaloacetate decarboxylase, gamma chain V060002_RS17080 PF02599 Global regulator protein family V060002_RS17085 PF00696 Amino acid kinase family V060002_RS17085 PF13840 ACT domain V060002_RS17085 PF01842 ACT domain V060002_RS17090 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain V060002_RS17090 PF02272 DHHA1 domain V060002_RS17090 PF01411 tRNA synthetases class II (A) V060002_RS17095 PF02631 RecX family V060002_RS17100 PF00154 recA bacterial DNA recombination protein V060002_RS17105 PF02464 Competence-damaged protein V060002_RS17110 PF12857 TOBE-like domain V060002_RS17110 PF00005 ABC transporter V060002_RS17115 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS17120 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS17130 PF00291 Pyridoxal-phosphate dependent enzyme V060002_RS17135 PF01624 MutS domain I V060002_RS17135 PF05190 MutS family domain IV V060002_RS17135 PF05192 MutS domain III V060002_RS17135 PF00488 MutS domain V V060002_RS17135 PF05188 MutS domain II V060002_RS17140 PF00140 Sigma-70 factor, region 1.2 V060002_RS17140 PF04542 Sigma-70 region 2 V060002_RS17140 PF04545 Sigma-70, region 4 V060002_RS17140 PF04539 Sigma-70 region 3 V060002_RS17145 PF01476 LysM domain V060002_RS17145 PF01551 Peptidase family M23 V060002_RS17155 PF01975 Survival protein SurE V060002_RS17160 PF01142 tRNA pseudouridine synthase D (TruD) V060002_RS17165 PF02542 YgbB family V060002_RS17170 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase V060002_RS17175 PF04977 Septum formation initiator V060002_RS17180 PF02673 Bacitracin resistance protein BacA V060002_RS17185 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) V060002_RS17190 PF02152 Dihydroneopterin aldolase V060002_RS17200 PF02660 Glycerol-3-phosphate acyltransferase V060002_RS17205 PF00561 alpha/beta hydrolase fold V060002_RS17210 PF00814 Glycoprotease family V060002_RS17215 PF01165 Ribosomal protein S21 V060002_RS17220 PF09424 Yqey-like protein V060002_RS17225 PF10410 DnaB-helicase binding domain of primase V060002_RS17225 PF08278 DNA primase DnaG DnaB-binding V060002_RS17225 PF08275 DNA primase catalytic core, N-terminal domain V060002_RS17225 PF01807 CHC2 zinc finger V060002_RS17230 PF04545 Sigma-70, region 4 V060002_RS17230 PF04539 Sigma-70 region 3 V060002_RS17230 PF00140 Sigma-70 factor, region 1.2 V060002_RS17230 PF03979 Sigma-70 factor, region 1.1 V060002_RS17230 PF04542 Sigma-70 region 2 V060002_RS17230 PF04546 Sigma-70, non-essential region V060002_RS17240 PF13356 Arm DNA-binding domain V060002_RS17240 PF00589 Phage integrase family V060002_RS17245 PF00563 EAL domain V060002_RS17245 PF08668 HDOD domain V060002_RS17250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS17250 PF00672 HAMP domain V060002_RS17250 PF17200 Single Cache domain 2 V060002_RS17255 PF12833 Helix-turn-helix domain V060002_RS17260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS17260 PF08447 PAS fold V060002_RS17270 PF04002 RadC-like JAB domain V060002_RS17305 PF01476 LysM domain V060002_RS17305 PF08525 Opacity-associated protein A N-terminal motif V060002_RS17305 PF01551 Peptidase family M23 V060002_RS17315 PF00114 Pilin (bacterial filament) V060002_RS17315 PF07963 Prokaryotic N-terminal methylation motif V060002_RS17330 PF00075 RNase H V060002_RS17380 PF03480 Bacterial extracellular solute-binding protein, family 7 V060002_RS17385 PF01380 SIS domain V060002_RS17390 PF00455 DeoR C terminal sensor domain V060002_RS17390 PF08220 DeoR-like helix-turn-helix domain V060002_RS17395 PF02887 Pyruvate kinase, alpha/beta domain V060002_RS17395 PF00224 Pyruvate kinase, barrel domain V060002_RS17400 PF04402 Protein of unknown function (DUF541) V060002_RS17405 PF03466 LysR substrate binding domain V060002_RS17405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS17410 PF01810 LysE type translocator V060002_RS17415 PF05552 Conserved TM helix V060002_RS17415 PF00924 Mechanosensitive ion channel V060002_RS17425 PF01116 Fructose-bisphosphate aldolase class-II V060002_RS17430 PF00162 Phosphoglycerate kinase V060002_RS17435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain V060002_RS17435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain V060002_RS17440 PF00593 TonB dependent receptor V060002_RS17440 PF07715 TonB-dependent Receptor Plug Domain V060002_RS17445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS17445 PF03466 LysR substrate binding domain V060002_RS17450 PF02780 Transketolase, C-terminal domain V060002_RS17450 PF02779 Transketolase, pyrimidine binding domain V060002_RS17450 PF00456 Transketolase, thiamine diphosphate binding domain V060002_RS17455 PF00438 S-adenosylmethionine synthetase, N-terminal domain V060002_RS17455 PF02772 S-adenosylmethionine synthetase, central domain V060002_RS17455 PF02773 S-adenosylmethionine synthetase, C-terminal domain V060002_RS17460 PF10263 SprT-like family V060002_RS17460 PF17283 SprT-like zinc ribbon domain V060002_RS17465 PF04231 Endonuclease I V060002_RS17470 PF04452 RNA methyltransferase V060002_RS17475 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain V060002_RS17475 PF02951 Prokaryotic glutathione synthetase, N-terminal domain V060002_RS17480 PF02622 Uncharacterized ACR, COG1678 V060002_RS17485 PF03652 Holliday junction resolvase V060002_RS17490 PF00579 tRNA synthetases class I (W and Y) V060002_RS17490 PF01479 S4 domain V060002_RS17500 PF00437 Type II/IV secretion system protein V060002_RS17505 PF00437 Type II/IV secretion system protein V060002_RS17510 PF01168 Alanine racemase, N-terminal domain V060002_RS17515 PF03807 NADP oxidoreductase coenzyme F420-dependent V060002_RS17515 PF14748 Pyrroline-5-carboxylate reductase dimerisation V060002_RS17520 PF02325 YGGT family V060002_RS17525 PF02594 Uncharacterised ACR, YggU family COG1872 V060002_RS17535 PF01725 Ham1 family V060002_RS17540 PF06969 HemN C-terminal domain V060002_RS17540 PF04055 Radical SAM superfamily V060002_RS17545 PF04960 Glutaminase V060002_RS17550 PF02390 Putative methyltransferase V060002_RS17555 PF00730 HhH-GPD superfamily base excision DNA repair protein V060002_RS17555 PF14815 NUDIX domain V060002_RS17555 PF10576 Iron-sulfur binding domain of endonuclease III V060002_RS17555 PF00633 Helix-hairpin-helix motif V060002_RS17560 PF04362 Bacterial Fe(2+) trafficking V060002_RS17565 PF01464 Transglycosylase SLT domain V060002_RS17565 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain V060002_RS17590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS17590 PF00672 HAMP domain V060002_RS17590 PF12729 Four helix bundle sensory module for signal transduction V060002_RS17620 PF00226 DnaJ domain V060002_RS17620 PF05099 Tellurite resistance protein TerB V060002_RS17625 PF03968 OstA-like protein V060002_RS17625 PF04453 LPS transport system D V060002_RS17630 PF09312 SurA N-terminal domain V060002_RS17635 PF04166 Pyridoxal phosphate biosynthetic protein PdxA V060002_RS17640 PF00398 Ribosomal RNA adenine dimethylase V060002_RS17645 PF04379 ApaG domain V060002_RS17650 PF00149 Calcineurin-like phosphoesterase V060002_RS17655 PF00186 Dihydrofolate reductase V060002_RS17660 PF12821 Threonine/Serine exporter, ThrE V060002_RS17665 PF06738 Putative threonine/serine exporter V060002_RS17670 PF01018 GTP1/OBG V060002_RS17670 PF01926 50S ribosome-binding GTPase V060002_RS17675 PF01016 Ribosomal L27 protein V060002_RS17680 PF00829 Ribosomal prokaryotic L21 protein V060002_RS17685 PF00348 Polyprenyl synthetase V060002_RS17695 PF00056 lactate/malate dehydrogenase, NAD binding domain V060002_RS17695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain V060002_RS17700 PF02863 Arginine repressor, C-terminal domain V060002_RS17700 PF01316 Arginine repressor, DNA binding domain V060002_RS17710 PF16868 NMT1-like family V060002_RS17720 PF00582 Universal stress protein family V060002_RS17735 PF06877 Regulator of ribonuclease activity B V060002_RS17745 PF01523 Putative modulator of DNA gyrase V060002_RS17750 PF00795 Carbon-nitrogen hydrolase V060002_RS17755 PF13502 AsmA-like C-terminal region V060002_RS17755 PF13116 Protein of unknown function V060002_RS17760 PF10150 Ribonuclease E/G family V060002_RS17760 PF00575 S1 RNA binding domain V060002_RS17765 PF02545 Maf-like protein V060002_RS17770 PF04093 rod shape-determining protein MreD V060002_RS17775 PF04085 rod shape-determining protein MreC V060002_RS17810 PF07963 Prokaryotic N-terminal methylation motif V060002_RS17815 PF07963 Prokaryotic N-terminal methylation motif V060002_RS17825 PF00482 Type II secretion system (T2SS), protein F V060002_RS17830 PF00437 Type II/IV secretion system protein V060002_RS17830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain V060002_RS17840 PF01471 Putative peptidoglycan binding domain V060002_RS17840 PF13401 AAA domain V060002_RS17845 PF03958 Bacterial type II/III secretion system short domain V060002_RS17845 PF00263 Bacterial type II and III secretion system protein V060002_RS17845 PF11741 AMIN domain V060002_RS17845 PF07660 Secretin and TonB N terminus short domain V060002_RS17865 PF00563 EAL domain V060002_RS17865 PF17157 Gammaproteobacterial periplasmic sensor domain V060002_RS17865 PF00990 Diguanylate cyclase, GGDEF domain V060002_RS17870 PF00436 Single-strand binding protein family V060002_RS17875 PF00196 Bacterial regulatory proteins, luxR family V060002_RS17880 PF00483 Nucleotidyl transferase V060002_RS17885 PF00005 ABC transporter V060002_RS17885 PF17760 UvrA interaction domain V060002_RS17885 PF17755 UvrA DNA-binding domain V060002_RS17895 PF00266 Aminotransferase class-V V060002_RS17900 PF00696 Amino acid kinase family V060002_RS17900 PF01842 ACT domain V060002_RS17905 PF02965 Vitamin B12 dependent methionine synthase, activation domain V060002_RS17905 PF02574 Homocysteine S-methyltransferase V060002_RS17905 PF00809 Pterin binding enzyme V060002_RS17905 PF02607 B12 binding domain V060002_RS17905 PF02310 B12 binding domain V060002_RS17910 PF00999 Sodium/hydrogen exchanger family V060002_RS17975 PF01507 Phosphoadenosine phosphosulfate reductase family V060002_RS17980 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain V060002_RS17980 PF01077 Nitrite and sulphite reductase 4Fe-4S domain V060002_RS17985 PF00258 Flavodoxin V060002_RS17985 PF00667 FAD binding domain V060002_RS17985 PF00175 Oxidoreductase NAD-binding domain V060002_RS18005 PF09583 Phage shock protein G (Phageshock_PspG) V060002_RS18010 PF01207 Dihydrouridine synthase (Dus) V060002_RS18015 PF01475 Ferric uptake regulator family V060002_RS18025 PF12706 Beta-lactamase superfamily domain V060002_RS18030 PF00342 Phosphoglucose isomerase V060002_RS18035 PF01894 Uncharacterised protein family UPF0047 V060002_RS18040 PF01168 Alanine racemase, N-terminal domain V060002_RS18040 PF00842 Alanine racemase, C-terminal domain V060002_RS18045 PF03796 DnaB-like helicase C terminal domain V060002_RS18045 PF00772 DnaB-like helicase N terminal domain V060002_RS18055 PF03948 Ribosomal protein L9, C-terminal domain V060002_RS18055 PF01281 Ribosomal protein L9, N-terminal domain V060002_RS18060 PF01084 Ribosomal protein S18 V060002_RS18065 PF00436 Single-strand binding protein family V060002_RS18070 PF01250 Ribosomal protein S6 V060002_RS18075 PF00210 Ferritin-like domain V060002_RS18080 PF04324 BFD-like [2Fe-2S] binding domain V060002_RS18085 PF00009 Elongation factor Tu GTP binding domain V060002_RS18085 PF03143 Elongation factor Tu C-terminal domain V060002_RS18085 PF03144 Elongation factor Tu domain 2 V060002_RS18090 PF00009 Elongation factor Tu GTP binding domain V060002_RS18090 PF03144 Elongation factor Tu domain 2 V060002_RS18090 PF14492 Elongation Factor G, domain II V060002_RS18090 PF00679 Elongation factor G C-terminus V060002_RS18090 PF03764 Elongation factor G, domain IV V060002_RS18095 PF00177 Ribosomal protein S7p/S5e V060002_RS18100 PF00164 Ribosomal protein S12/S23 V060002_RS18110 PF02635 DsrE/DsrF-like family V060002_RS18115 PF02635 DsrE/DsrF-like family V060002_RS18120 PF13309 HTH domain V060002_RS18120 PF08348 YheO-like PAS domain V060002_RS18125 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase V060002_RS18125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase V060002_RS18135 PF04102 SlyX V060002_RS18140 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) V060002_RS18145 PF01145 SPFH domain / Band 7 family V060002_RS18150 PF12221 Bacterial membrane protein N terminal V060002_RS18150 PF01145 SPFH domain / Band 7 family V060002_RS18155 PF16360 GTP-binding GTPase Middle Region V060002_RS18155 PF13167 GTP-binding GTPase N-terminal V060002_RS18155 PF01926 50S ribosome-binding GTPase V060002_RS18160 PF17209 Hfq protein V060002_RS18170 PF01119 DNA mismatch repair protein, C-terminal domain V060002_RS18170 PF08676 MutL C terminal dimerisation domain V060002_RS18175 PF01520 N-acetylmuramoyl-L-alanine amidase V060002_RS18180 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE V060002_RS18215 PF00929 Exonuclease V060002_RS18220 PF03193 RsgA GTPase V060002_RS18225 PF02666 Phosphatidylserine decarboxylase V060002_RS18230 PF03600 Citrate transporter V060002_RS18230 PF02080 TrkA-C domain V060002_RS18240 PF01676 Metalloenzyme superfamily V060002_RS18240 PF06415 BPG-independent PGAM N-terminus (iPGM_N) V060002_RS18245 PF01551 Peptidase family M23 V060002_RS18255 PF00440 Bacterial regulatory proteins, tetR family V060002_RS18255 PF08360 QacR-like protein, C-terminal region V060002_RS18260 PF01208 Uroporphyrinogen decarboxylase (URO-D) V060002_RS18265 PF09297 NADH pyrophosphatase zinc ribbon domain V060002_RS18265 PF00293 NUDIX domain V060002_RS18270 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ V060002_RS18275 PF04983 RNA polymerase Rpb1, domain 3 V060002_RS18275 PF05000 RNA polymerase Rpb1, domain 4 V060002_RS18275 PF00623 RNA polymerase Rpb1, domain 2 V060002_RS18275 PF04998 RNA polymerase Rpb1, domain 5 V060002_RS18275 PF04997 RNA polymerase Rpb1, domain 1 V060002_RS18280 PF04561 RNA polymerase Rpb2, domain 2 V060002_RS18280 PF10385 RNA polymerase beta subunit external 1 domain V060002_RS18280 PF00562 RNA polymerase Rpb2, domain 6 V060002_RS18280 PF04560 RNA polymerase Rpb2, domain 7 V060002_RS18280 PF04565 RNA polymerase Rpb2, domain 3 V060002_RS18280 PF04563 RNA polymerase beta subunit V060002_RS18285 PF00542 Ribosomal protein L7/L12 C-terminal domain V060002_RS18285 PF16320 Ribosomal protein L7/L12 dimerisation domain V060002_RS18290 PF00466 Ribosomal protein L10 V060002_RS18295 PF00687 Ribosomal protein L1p/L10e family V060002_RS18300 PF03946 Ribosomal protein L11, N-terminal domain V060002_RS18300 PF00298 Ribosomal protein L11, RNA binding domain V060002_RS18305 PF02357 Transcription termination factor nusG V060002_RS18305 PF00467 KOW motif V060002_RS18310 PF00584 SecE/Sec61-gamma subunits of protein translocation complex V060002_RS18315 PF00009 Elongation factor Tu GTP binding domain V060002_RS18315 PF03144 Elongation factor Tu domain 2 V060002_RS18315 PF03143 Elongation factor Tu C-terminal domain V060002_RS18340 PF00485 Phosphoribulokinase / Uridine kinase family V060002_RS18345 PF08279 HTH domain V060002_RS18345 PF03099 Biotin/lipoate A/B protein ligase family V060002_RS18345 PF02237 Biotin protein ligase C terminal domain V060002_RS18350 PF01565 FAD binding domain V060002_RS18350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain V060002_RS18360 PF13091 PLD-like domain V060002_RS18395 PF00175 Oxidoreductase NAD-binding domain V060002_RS18400 PF00111 2Fe-2S iron-sulfur cluster binding domain V060002_RS18400 PF00175 Oxidoreductase NAD-binding domain V060002_RS18400 PF00970 Oxidoreductase FAD-binding domain V060002_RS18405 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase V060002_RS18415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V060002_RS18415 PF07497 Rho termination factor, RNA-binding domain V060002_RS18415 PF07498 Rho termination factor, N-terminal domain V060002_RS18420 PF00085 Thioredoxin V060002_RS18425 PF00271 Helicase conserved C-terminal domain V060002_RS18425 PF00270 DEAD/DEAH box helicase V060002_RS18430 PF02541 Ppx/GppA phosphatase family V060002_RS18435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase V060002_RS18435 PF00512 His Kinase A (phospho-acceptor) domain V060002_RS18435 PF09456 RcsC Alpha-Beta-Loop (ABL) V060002_RS18435 PF00072 Response regulator receiver domain V060002_RS18440 PF12832 MFS_1 like family V060002_RS18460 PF13193 AMP-binding enzyme C-terminal domain V060002_RS18460 PF16177 Acetyl-coenzyme A synthetase N-terminus V060002_RS18460 PF00501 AMP-binding enzyme V060002_RS18465 PF01220 Dehydroquinase class II V060002_RS18470 PF00364 Biotin-requiring enzyme V060002_RS18475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain V060002_RS18475 PF02785 Biotin carboxylase C-terminal domain V060002_RS18475 PF00289 Biotin carboxylase, N-terminal domain V060002_RS18485 PF01207 Dihydrouridine synthase (Dus) V060002_RS18490 PF02954 Bacterial regulatory protein, Fis family V060002_RS18495 PF00356 Bacterial regulatory proteins, lacI family V060002_RS18495 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family V060002_RS18500 PF00920 Dehydratase family V060002_RS18505 PF01202 Shikimate kinase V060002_RS18510 PF02447 GntP family permease V060002_RS18515 PF01081 KDPG and KHG aldolase V060002_RS18520 PF00593 TonB dependent receptor V060002_RS18520 PF07715 TonB-dependent Receptor Plug Domain V060002_RS18535 PF17200 Single Cache domain 2 V060002_RS18535 PF00672 HAMP domain V060002_RS18535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS18545 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region V060002_RS18570 PF01734 Patatin-like phospholipase V060002_RS18610 PF07992 Pyridine nucleotide-disulphide oxidoreductase V060002_RS18610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain V060002_RS18615 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ V060002_RS18620 PF01432 Peptidase family M3 V060002_RS18625 PF13361 UvrD-like helicase C-terminal domain V060002_RS18625 PF00580 UvrD/REP helicase N-terminal domain V060002_RS18640 PF01810 LysE type translocator V060002_RS18645 PF12833 Helix-turn-helix domain V060002_RS18655 PF00892 EamA-like transporter family V060002_RS18660 PF09382 RQC domain V060002_RS18660 PF16124 RecQ zinc-binding V060002_RS18660 PF00270 DEAD/DEAH box helicase V060002_RS18660 PF00271 Helicase conserved C-terminal domain V060002_RS18660 PF00570 HRDC domain V060002_RS18675 PF00664 ABC transporter transmembrane region V060002_RS18675 PF00005 ABC transporter V060002_RS18680 PF00593 TonB dependent receptor V060002_RS18680 PF07715 TonB-dependent Receptor Plug Domain V060002_RS18685 PF00005 ABC transporter V060002_RS18690 PF01497 Periplasmic binding protein V060002_RS18695 PF01032 FecCD transport family V060002_RS18700 PF01418 Helix-turn-helix domain, rpiR family V060002_RS18700 PF01380 SIS domain V060002_RS18710 PF13580 SIS domain V060002_RS18715 PF02378 Phosphotransferase system, EIIC V060002_RS18715 PF00367 phosphotransferase system, EIIB V060002_RS18720 PF03350 Uncharacterized protein family, UPF0114 V060002_RS18725 PF03755 YicC-like family, N-terminal region V060002_RS18725 PF08340 Domain of unknown function (DUF1732) V060002_RS18730 PF01138 3' exoribonuclease family, domain 1 V060002_RS18730 PF03725 3' exoribonuclease family, domain 2 V060002_RS18735 PF00156 Phosphoribosyl transferase domain V060002_RS18740 PF03279 Bacterial lipid A biosynthesis acyltransferase V060002_RS18745 PF03279 Bacterial lipid A biosynthesis acyltransferase V060002_RS18750 PF00440 Bacterial regulatory proteins, tetR family V060002_RS18760 PF04127 DNA / pantothenate metabolism flavoprotein V060002_RS18760 PF02441 Flavoprotein V060002_RS18765 PF00672 HAMP domain V060002_RS18765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain V060002_RS18770 PF04002 RadC-like JAB domain V060002_RS18775 PF00830 Ribosomal L28 family V060002_RS18780 PF00471 Ribosomal protein L33 V060002_RS18790 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain V060002_RS18790 PF06827 Zinc finger found in FPG and IleRS V060002_RS18790 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain V060002_RS18795 PF01467 Cytidylyltransferase-like V060002_RS18800 PF01075 Glycosyltransferase family 9 (heptosyltransferase) V060002_RS18805 PF00535 Glycosyl transferase family 2 V060002_RS18810 PF01075 Glycosyltransferase family 9 (heptosyltransferase) V060002_RS18845 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) V060002_RS18850 PF04488 Glycosyltransferase sugar-binding region containing DXD motif V060002_RS18860 PF01075 Glycosyltransferase family 9 (heptosyltransferase) V060002_RS18875 PF00457 Glycosyl hydrolases family 11 V060002_RS18875 PF01522 Polysaccharide deacetylase V060002_RS18880 PF01370 NAD dependent epimerase/dehydratase family V060002_RS18885 PF01050 Mannose-6-phosphate isomerase V060002_RS18885 PF00483 Nucleotidyl transferase V060002_RS18890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I V060002_RS18890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II V060002_RS18890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III V060002_RS18890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain V060002_RS18895 PF16363 GDP-mannose 4,6 dehydratase V060002_RS18900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family V060002_RS18915 PF00005 ABC transporter V060002_RS18915 PF14524 Wzt C-terminal domain V060002_RS18925 PF13193 AMP-binding enzyme C-terminal domain V060002_RS18925 PF00501 AMP-binding enzyme V060002_RS18930 PF00171 Aldehyde dehydrogenase family V060002_RS18930 PF00465 Iron-containing alcohol dehydrogenase V060002_RS18940 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS18970 PF02719 Polysaccharide biosynthesis protein V060002_RS18975 PF01370 NAD dependent epimerase/dehydratase family V060002_RS18980 PF02397 Bacterial sugar transferase V060002_RS18985 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain V060002_RS18985 PF10996 Beta-Casp domain V060002_RS18985 PF00753 Metallo-beta-lactamase superfamily V060002_RS18990 PF00924 Mechanosensitive ion channel V060002_RS18995 PF03167 Uracil DNA glycosylase superfamily V060002_RS19000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain V060002_RS19005 PF04222 Protein of unknown function (DUF416) V060002_RS19010 PF01238 Phosphomannose isomerase type I V060002_RS19015 PF00480 ROK family V060002_RS19020 PF01595 Cyclin M transmembrane N-terminal domain V060002_RS19020 PF00571 CBS domain V060002_RS19025 PF00216 Bacterial DNA-binding protein V060002_RS19035 PF02844 Phosphoribosylglycinamide synthetase, N domain V060002_RS19035 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain V060002_RS19035 PF02843 Phosphoribosylglycinamide synthetase, C domain V060002_RS19040 PF01808 AICARFT/IMPCHase bienzyme V060002_RS19040 PF02142 MGS-like domain V060002_RS19050 PF13411 MerR HTH family regulatory protein V060002_RS19055 PF00486 Transcriptional regulatory protein, C terminal V060002_RS19055 PF18500 CadC C-terminal domain 1 V060002_RS19060 PF13520 Amino acid permease V060002_RS19105 PF01734 Patatin-like phospholipase V060002_RS19130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region V060002_RS19140 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS19140 PF12911 N-terminal TM domain of oligopeptide transport permease C V060002_RS19145 PF00528 Binding-protein-dependent transport system inner membrane component V060002_RS19150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle V060002_RS19155 PF00005 ABC transporter V060002_RS19155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region V060002_RS19195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III V060002_RS19200 PF13361 UvrD-like helicase C-terminal domain V060002_RS19200 PF00580 UvrD/REP helicase N-terminal domain V060002_RS19205 PF00440 Bacterial regulatory proteins, tetR family V060002_RS19210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion V060002_RS19215 PF00873 AcrB/AcrD/AcrF family V060002_RS19220 PF04380 Membrane fusogenic activity V060002_RS19225 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain V060002_RS19225 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain V060002_RS19230 PF03466 LysR substrate binding domain V060002_RS19230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS19275 PF12724 Flavodoxin domain V060002_RS19280 PF02386 Cation transport protein V060002_RS19285 PF09186 Domain of unknown function (DUF1949) V060002_RS19285 PF01205 Uncharacterized protein family UPF0029 V060002_RS19290 PF00378 Enoyl-CoA hydratase/isomerase V060002_RS19290 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain V060002_RS19290 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain V060002_RS19295 PF02803 Thiolase, C-terminal domain V060002_RS19295 PF00108 Thiolase, N-terminal domain V060002_RS19300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family V060002_RS19300 PF03466 LysR substrate binding domain V060002_RS19305 PF07690 Major Facilitator Superfamily V060002_RS19310 PF12804 MobA-like NTP transferase domain V060002_RS19310 PF00132 Bacterial transferase hexapeptide (six repeats) V060002_RS19315 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain V060002_RS19315 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain V060002_RS19320 PF02874 ATP synthase alpha/beta family, beta-barrel domain V060002_RS19320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V060002_RS19325 PF00231 ATP synthase V060002_RS19330 PF02874 ATP synthase alpha/beta family, beta-barrel domain V060002_RS19330 PF00306 ATP synthase alpha/beta chain, C terminal domain V060002_RS19330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain V060002_RS19335 PF00213 ATP synthase delta (OSCP) subunit V060002_RS19340 PF00430 ATP synthase B/B' CF(0) V060002_RS19345 PF00137 ATP synthase subunit C V060002_RS19350 PF00119 ATP synthase A chain V060002_RS19355 PF03899 ATP synthase I chain V060002_RS19360 PF02195 ParB-like nuclease domain V060002_RS19360 PF17762 HTH domain found in ParB protein V060002_RS19365 PF13614 AAA domain V060002_RS19370 PF02527 rRNA small subunit methyltransferase G V060002_RS19375 PF13932 GidA associated domain V060002_RS19375 PF01134 Glucose inhibited division protein A