locus-tag class description JV59_RS00005 PF07687 Peptidase dimerisation domain JV59_RS00005 PF01546 Peptidase family M20/M25/M40 JV59_RS00010 PF02774 Semialdehyde dehydrogenase, dimerisation domain JV59_RS00010 PF01118 Semialdehyde dehydrogenase, NAD binding domain JV59_RS00015 PF00696 Amino acid kinase family JV59_RS00025 PF00583 Acetyltransferase (GNAT) family JV59_RS00025 PF14698 Argininosuccinate lyase C-terminal JV59_RS00025 PF00206 Lyase JV59_RS00035 PF01042 Endoribonuclease L-PSP JV59_RS00040 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS00040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JV59_RS00045 PF00462 Glutaredoxin JV59_RS00045 PF08534 Redoxin JV59_RS00050 PF03466 LysR substrate binding domain JV59_RS00050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS00055 PF00905 Penicillin binding protein transpeptidase domain JV59_RS00055 PF00912 Transglycosylase JV59_RS00055 PF17092 Penicillin-binding protein OB-like domain JV59_RS00080 PF07660 Secretin and TonB N terminus short domain JV59_RS00080 PF03958 Bacterial type II/III secretion system short domain JV59_RS00080 PF00263 Bacterial type II and III secretion system protein JV59_RS00080 PF11741 AMIN domain JV59_RS00085 PF01202 Shikimate kinase JV59_RS00090 PF01761 3-dehydroquinate synthase JV59_RS00100 PF02086 D12 class N6 adenine-specific DNA methyltransferase JV59_RS00105 PF00834 Ribulose-phosphate 3 epimerase family JV59_RS00110 PF13419 Haloacid dehalogenase-like hydrolase JV59_RS00115 PF00579 tRNA synthetases class I (W and Y) JV59_RS00120 PF00588 SpoU rRNA Methylase family JV59_RS00125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JV59_RS00125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JV59_RS00130 PF16527 Two-component sensor protein CpxA, periplasmic domain JV59_RS00130 PF00672 HAMP domain JV59_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS00130 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS00135 PF00486 Transcriptional regulatory protein, C terminal JV59_RS00135 PF00072 Response regulator receiver domain JV59_RS00140 PF07813 LTXXQ motif family protein JV59_RS00145 PF01545 Cation efflux family JV59_RS00145 PF16916 Dimerisation domain of Zinc Transporter JV59_RS00150 PF00365 Phosphofructokinase JV59_RS00155 PF02308 MgtC family JV59_RS00165 PF04055 Radical SAM superfamily JV59_RS00170 PF09285 Elongation factor P, C-terminal JV59_RS00170 PF08207 Elongation factor P (EF-P) KOW-like domain JV59_RS00170 PF01132 Elongation factor P (EF-P) OB domain JV59_RS00175 PF01040 UbiA prenyltransferase family JV59_RS00180 PF03737 Aldolase/RraA JV59_RS00185 PF01554 MatE JV59_RS00190 PF00121 Triosephosphate isomerase JV59_RS00205 PF00485 Phosphoribulokinase / Uridine kinase family JV59_RS00230 PF03143 Elongation factor Tu C-terminal domain JV59_RS00230 PF00009 Elongation factor Tu GTP binding domain JV59_RS00230 PF03144 Elongation factor Tu domain 2 JV59_RS00240 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JV59_RS00245 PF00467 KOW motif JV59_RS00245 PF02357 Transcription termination factor nusG JV59_RS00250 PF00298 Ribosomal protein L11, RNA binding domain JV59_RS00250 PF03946 Ribosomal protein L11, N-terminal domain JV59_RS00255 PF00687 Ribosomal protein L1p/L10e family JV59_RS00260 PF00466 Ribosomal protein L10 JV59_RS00265 PF00542 Ribosomal protein L7/L12 C-terminal domain JV59_RS00265 PF16320 Ribosomal protein L7/L12 dimerisation domain JV59_RS00270 PF04563 RNA polymerase beta subunit JV59_RS00270 PF04561 RNA polymerase Rpb2, domain 2 JV59_RS00270 PF04565 RNA polymerase Rpb2, domain 3 JV59_RS00270 PF10385 RNA polymerase beta subunit external 1 domain JV59_RS00270 PF00562 RNA polymerase Rpb2, domain 6 JV59_RS00270 PF04560 RNA polymerase Rpb2, domain 7 JV59_RS00275 PF04998 RNA polymerase Rpb1, domain 5 JV59_RS00275 PF05000 RNA polymerase Rpb1, domain 4 JV59_RS00275 PF04983 RNA polymerase Rpb1, domain 3 JV59_RS00275 PF00623 RNA polymerase Rpb1, domain 2 JV59_RS00275 PF04997 RNA polymerase Rpb1, domain 1 JV59_RS00280 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JV59_RS00290 PF01208 Uroporphyrinogen decarboxylase (URO-D) JV59_RS00295 PF00440 Bacterial regulatory proteins, tetR family JV59_RS00295 PF08360 QacR-like protein, C-terminal region JV59_RS00305 PF01551 Peptidase family M23 JV59_RS00310 PF01676 Metalloenzyme superfamily JV59_RS00310 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JV59_RS00320 PF00672 HAMP domain JV59_RS00320 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS00320 PF17200 Single Cache domain 2 JV59_RS00325 PF03600 Citrate transporter JV59_RS00325 PF02080 TrkA-C domain JV59_RS00335 PF03193 RsgA GTPase JV59_RS00340 PF00929 Exonuclease JV59_RS00375 PF08331 Domain of unknown function (DUF1730) JV59_RS00380 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JV59_RS00385 PF01520 N-acetylmuramoyl-L-alanine amidase JV59_RS00390 PF08676 MutL C terminal dimerisation domain JV59_RS00390 PF01119 DNA mismatch repair protein, C-terminal domain JV59_RS00400 PF17209 Hfq protein JV59_RS00405 PF01926 50S ribosome-binding GTPase JV59_RS00405 PF16360 GTP-binding GTPase Middle Region JV59_RS00405 PF13167 GTP-binding GTPase N-terminal JV59_RS00410 PF01145 SPFH domain / Band 7 family JV59_RS00410 PF12221 Bacterial membrane protein N terminal JV59_RS00415 PF01145 SPFH domain / Band 7 family JV59_RS00420 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JV59_RS00425 PF04102 SlyX JV59_RS00435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JV59_RS00435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JV59_RS00440 PF08348 YheO-like PAS domain JV59_RS00440 PF13309 HTH domain JV59_RS00445 PF02635 DsrE/DsrF-like family JV59_RS00450 PF02635 DsrE/DsrF-like family JV59_RS00460 PF00164 Ribosomal protein S12/S23 JV59_RS00465 PF00177 Ribosomal protein S7p/S5e JV59_RS00470 PF03144 Elongation factor Tu domain 2 JV59_RS00470 PF00009 Elongation factor Tu GTP binding domain JV59_RS00470 PF14492 Elongation Factor G, domain II JV59_RS00470 PF03764 Elongation factor G, domain IV JV59_RS00470 PF00679 Elongation factor G C-terminus JV59_RS00475 PF03144 Elongation factor Tu domain 2 JV59_RS00475 PF03143 Elongation factor Tu C-terminal domain JV59_RS00475 PF00009 Elongation factor Tu GTP binding domain JV59_RS00480 PF04324 BFD-like [2Fe-2S] binding domain JV59_RS00485 PF00210 Ferritin-like domain JV59_RS00490 PF01250 Ribosomal protein S6 JV59_RS00495 PF01084 Ribosomal protein S18 JV59_RS00500 PF01281 Ribosomal protein L9, N-terminal domain JV59_RS00500 PF03948 Ribosomal protein L9, C-terminal domain JV59_RS00510 PF03796 DnaB-like helicase C terminal domain JV59_RS00510 PF00772 DnaB-like helicase N terminal domain JV59_RS00515 PF00842 Alanine racemase, C-terminal domain JV59_RS00515 PF01168 Alanine racemase, N-terminal domain JV59_RS00520 PF01894 Uncharacterised protein family UPF0047 JV59_RS00525 PF00342 Phosphoglucose isomerase JV59_RS00545 PF00005 ABC transporter JV59_RS00560 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JV59_RS00570 PF01625 Peptide methionine sulfoxide reductase JV59_RS00575 PF17243 POTRA domain TamA domain 1 JV59_RS00575 PF07244 Surface antigen variable number repeat JV59_RS00575 PF01103 Surface antigen JV59_RS00580 PF04357 TamB, inner membrane protein subunit of TAM complex JV59_RS00585 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JV59_RS00595 PF00719 Inorganic pyrophosphatase JV59_RS00600 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JV59_RS00605 PF02875 Mur ligase family, glutamate ligase domain JV59_RS00605 PF08245 Mur ligase middle domain JV59_RS00605 PF01225 Mur ligase family, catalytic domain JV59_RS00610 PF02441 Flavoprotein JV59_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS00625 PF00005 ABC transporter JV59_RS00630 PF04751 Protein of unknown function (DUF615) JV59_RS00635 PF01523 Putative modulator of DNA gyrase JV59_RS00640 PF01842 ACT domain JV59_RS00640 PF00696 Amino acid kinase family JV59_RS00645 PF00266 Aminotransferase class-V JV59_RS00660 PF00483 Nucleotidyl transferase JV59_RS00665 PF00196 Bacterial regulatory proteins, luxR family JV59_RS00670 PF00436 Single-strand binding protein family JV59_RS00675 PF00563 EAL domain JV59_RS00675 PF17157 Gammaproteobacterial periplasmic sensor domain JV59_RS00675 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS00695 PF03958 Bacterial type II/III secretion system short domain JV59_RS00695 PF00263 Bacterial type II and III secretion system protein JV59_RS00700 PF01471 Putative peptidoglycan binding domain JV59_RS00700 PF13401 AAA domain JV59_RS00705 PF04575 Protein of unknown function (DUF560) JV59_RS00710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JV59_RS00710 PF00437 Type II/IV secretion system protein JV59_RS00715 PF00482 Type II secretion system (T2SS), protein F JV59_RS00725 PF07963 Prokaryotic N-terminal methylation motif JV59_RS00730 PF07963 Prokaryotic N-terminal methylation motif JV59_RS00765 PF04085 rod shape-determining protein MreC JV59_RS00770 PF04093 rod shape-determining protein MreD JV59_RS00775 PF02545 Maf-like protein JV59_RS00780 PF00575 S1 RNA binding domain JV59_RS00780 PF10150 Ribonuclease E/G family JV59_RS00785 PF13116 Protein of unknown function JV59_RS00785 PF13502 AsmA-like C-terminal region JV59_RS00790 PF00795 Carbon-nitrogen hydrolase JV59_RS00795 PF01523 Putative modulator of DNA gyrase JV59_RS00845 PF01464 Transglycosylase SLT domain JV59_RS00845 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JV59_RS00850 PF04362 Bacterial Fe(2+) trafficking JV59_RS00855 PF00730 HhH-GPD superfamily base excision DNA repair protein JV59_RS00855 PF14815 NUDIX domain JV59_RS00855 PF00633 Helix-hairpin-helix motif JV59_RS00860 PF02390 Putative methyltransferase JV59_RS00865 PF04960 Glutaminase JV59_RS00870 PF06969 HemN C-terminal domain JV59_RS00870 PF04055 Radical SAM superfamily JV59_RS00875 PF01725 Ham1 family JV59_RS00885 PF00589 Phage integrase family JV59_RS00885 PF02899 Phage integrase, N-terminal SAM-like domain JV59_RS01005 PF02594 Uncharacterised ACR, YggU family COG1872 JV59_RS01010 PF02325 YGGT family JV59_RS01015 PF14748 Pyrroline-5-carboxylate reductase dimerisation JV59_RS01015 PF03807 NADP oxidoreductase coenzyme F420-dependent JV59_RS01020 PF01168 Alanine racemase, N-terminal domain JV59_RS01025 PF00437 Type II/IV secretion system protein JV59_RS01030 PF00437 Type II/IV secretion system protein JV59_RS01035 PF03652 Holliday junction resolvase JV59_RS01040 PF02622 Uncharacterized ACR, COG1678 JV59_RS01045 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JV59_RS01045 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JV59_RS01050 PF04452 RNA methyltransferase JV59_RS01055 PF04231 Endonuclease I JV59_RS01060 PF17283 SprT-like zinc ribbon domain JV59_RS01060 PF10263 SprT-like family JV59_RS01070 PF00438 S-adenosylmethionine synthetase, N-terminal domain JV59_RS01070 PF02772 S-adenosylmethionine synthetase, central domain JV59_RS01070 PF02773 S-adenosylmethionine synthetase, C-terminal domain JV59_RS01075 PF02779 Transketolase, pyrimidine binding domain JV59_RS01075 PF02780 Transketolase, C-terminal domain JV59_RS01075 PF00456 Transketolase, thiamine diphosphate binding domain JV59_RS01080 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JV59_RS01080 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JV59_RS01085 PF00162 Phosphoglycerate kinase JV59_RS01090 PF01116 Fructose-bisphosphate aldolase class-II JV59_RS01095 PF00924 Mechanosensitive ion channel JV59_RS01095 PF05552 Conserved TM helix JV59_RS01100 PF04073 Aminoacyl-tRNA editing domain JV59_RS01100 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JV59_RS01100 PF03129 Anticodon binding domain JV59_RS01105 PF01810 LysE type translocator JV59_RS01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS01110 PF03466 LysR substrate binding domain JV59_RS01115 PF04402 Protein of unknown function (DUF541) JV59_RS01120 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS01130 PF00224 Pyruvate kinase, barrel domain JV59_RS01130 PF02887 Pyruvate kinase, alpha/beta domain JV59_RS01135 PF00455 DeoR C terminal sensor domain JV59_RS01135 PF08220 DeoR-like helix-turn-helix domain JV59_RS01140 PF01380 SIS domain JV59_RS01145 PF13419 Haloacid dehalogenase-like hydrolase JV59_RS01150 PF05068 Mannitol repressor JV59_RS01155 PF08125 Mannitol dehydrogenase C-terminal domain JV59_RS01155 PF01232 Mannitol dehydrogenase Rossmann domain JV59_RS01160 PF02378 Phosphotransferase system, EIIC JV59_RS01160 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JV59_RS01160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JV59_RS01165 PF03480 Bacterial extracellular solute-binding protein, family 7 JV59_RS01175 PF00348 Polyprenyl synthetase JV59_RS01180 PF00829 Ribosomal prokaryotic L21 protein JV59_RS01185 PF01016 Ribosomal L27 protein JV59_RS01190 PF01926 50S ribosome-binding GTPase JV59_RS01190 PF01018 GTP1/OBG JV59_RS01200 PF12821 Threonine/Serine exporter, ThrE JV59_RS01205 PF00186 Dihydrofolate reductase JV59_RS01210 PF00149 Calcineurin-like phosphoesterase JV59_RS01215 PF04379 ApaG domain JV59_RS01220 PF00398 Ribosomal RNA adenine dimethylase JV59_RS01225 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JV59_RS01230 PF09312 SurA N-terminal domain JV59_RS01235 PF04453 LPS transport system D JV59_RS01235 PF03968 OstA-like protein JV59_RS01240 PF00226 DnaJ domain JV59_RS01240 PF05099 Tellurite resistance protein TerB JV59_RS01245 PF00589 Phage integrase family JV59_RS01275 PF05840 Bacteriophage replication gene A protein (GPA) JV59_RS01285 PF02463 RecF/RecN/SMC N terminal domain JV59_RS01290 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JV59_RS01300 PF04546 Sigma-70, non-essential region JV59_RS01300 PF03979 Sigma-70 factor, region 1.1 JV59_RS01300 PF00140 Sigma-70 factor, region 1.2 JV59_RS01300 PF04542 Sigma-70 region 2 JV59_RS01300 PF04539 Sigma-70 region 3 JV59_RS01300 PF04545 Sigma-70, region 4 JV59_RS01305 PF08278 DNA primase DnaG DnaB-binding JV59_RS01305 PF01807 CHC2 zinc finger JV59_RS01305 PF10410 DnaB-helicase binding domain of primase JV59_RS01305 PF08275 DNA primase catalytic core, N-terminal domain JV59_RS01310 PF09424 Yqey-like protein JV59_RS01315 PF01165 Ribosomal protein S21 JV59_RS01320 PF00814 Glycoprotease family JV59_RS01325 PF00561 alpha/beta hydrolase fold JV59_RS01330 PF02660 Glycerol-3-phosphate acyltransferase JV59_RS01335 PF02152 Dihydroneopterin aldolase JV59_RS01340 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JV59_RS01345 PF02673 Bacitracin resistance protein BacA JV59_RS01350 PF04977 Septum formation initiator JV59_RS01355 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JV59_RS01360 PF02542 YgbB family JV59_RS01365 PF01142 tRNA pseudouridine synthase D (TruD) JV59_RS01370 PF01975 Survival protein SurE JV59_RS01380 PF01551 Peptidase family M23 JV59_RS01380 PF01476 LysM domain JV59_RS01385 PF00140 Sigma-70 factor, region 1.2 JV59_RS01385 PF04542 Sigma-70 region 2 JV59_RS01385 PF04539 Sigma-70 region 3 JV59_RS01385 PF04545 Sigma-70, region 4 JV59_RS01390 PF03471 Transporter associated domain JV59_RS01390 PF01595 Cyclin M transmembrane N-terminal domain JV59_RS01390 PF00571 CBS domain JV59_RS01395 PF01578 Cytochrome C assembly protein JV59_RS01400 PF00448 SRP54-type protein, GTPase domain JV59_RS01400 PF02978 Signal peptide binding domain JV59_RS01400 PF02881 SRP54-type protein, helical bundle domain JV59_RS01405 PF00886 Ribosomal protein S16 JV59_RS01410 PF01782 RimM N-terminal domain JV59_RS01410 PF05239 PRC-barrel domain JV59_RS01415 PF01746 tRNA (Guanine-1)-methyltransferase JV59_RS01420 PF01245 Ribosomal protein L19 JV59_RS01425 PF03884 DNA gyrase inhibitor YacG JV59_RS01430 PF07072 Cell division protein JV59_RS01435 PF01121 Dephospho-CoA kinase JV59_RS01440 PF01478 Type IV leader peptidase family JV59_RS01440 PF06750 Bacterial Peptidase A24 N-terminal domain JV59_RS01445 PF00482 Type II secretion system (T2SS), protein F JV59_RS01450 PF00437 Type II/IV secretion system protein JV59_RS01450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JV59_RS01455 PF07963 Prokaryotic N-terminal methylation motif JV59_RS01460 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JV59_RS01460 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JV59_RS01465 PF01510 N-acetylmuramoyl-L-alanine amidase JV59_RS01470 PF00258 Flavodoxin JV59_RS01475 PF02899 Phage integrase, N-terminal SAM-like domain JV59_RS01475 PF00589 Phage integrase family JV59_RS01480 PF13098 Thioredoxin-like domain JV59_RS01480 PF10411 Disulfide bond isomerase protein N-terminus JV59_RS01485 PF02272 DHHA1 domain JV59_RS01485 PF01368 DHH family JV59_RS01485 PF17768 RecJ OB domain JV59_RS01490 PF00392 Bacterial regulatory proteins, gntR family JV59_RS01490 PF07729 FCD domain JV59_RS01495 PF17831 Pyruvate dehydrogenase E1 component middle domain JV59_RS01495 PF00456 Transketolase, thiamine diphosphate binding domain JV59_RS01500 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JV59_RS01500 PF00364 Biotin-requiring enzyme JV59_RS01500 PF02817 e3 binding domain JV59_RS01505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JV59_RS01505 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS01510 PF00440 Bacterial regulatory proteins, tetR family JV59_RS01515 PF00156 Phosphoribosyl transferase domain JV59_RS01520 PF00484 Carbonic anhydrase JV59_RS01525 PF00916 Sulfate permease family JV59_RS01525 PF01740 STAS domain JV59_RS01530 PF00005 ABC transporter JV59_RS01535 PF01061 ABC-2 type transporter JV59_RS01540 PF02569 Pantoate-beta-alanine ligase JV59_RS01545 PF02548 Ketopantoate hydroxymethyltransferase JV59_RS01550 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JV59_RS01555 PF12627 Probable RNA and SrmB- binding site of polymerase A JV59_RS01555 PF01743 Poly A polymerase head domain JV59_RS01555 PF12626 Polymerase A arginine-rich C-terminus JV59_RS01560 PF00749 tRNA synthetases class I (E and Q), catalytic domain JV59_RS01565 PF01258 Prokaryotic dksA/traR C4-type zinc finger JV59_RS01570 PF17746 SfsA N-terminal OB domain JV59_RS01570 PF03749 Sugar fermentation stimulation protein RE domain JV59_RS01575 PF00270 DEAD/DEAH box helicase JV59_RS01575 PF04408 Helicase associated domain (HA2) JV59_RS01575 PF00271 Helicase conserved C-terminal domain JV59_RS01575 PF08482 ATP-dependent helicase C-terminal JV59_RS01580 PF00905 Penicillin binding protein transpeptidase domain JV59_RS01580 PF14814 Bifunctional transglycosylase second domain JV59_RS01580 PF00912 Transglycosylase JV59_RS01585 PF01734 Patatin-like phospholipase JV59_RS01590 PF11791 Aconitate B N-terminal domain JV59_RS01590 PF06434 Aconitate hydratase 2 N-terminus JV59_RS01590 PF00330 Aconitase family (aconitate hydratase) JV59_RS01595 PF06062 Uncharacterised protein family (UPF0231) JV59_RS01600 PF00543 Nitrogen regulatory protein P-II JV59_RS01605 PF00909 Ammonium Transporter Family JV59_RS01610 PF13416 Bacterial extracellular solute-binding protein JV59_RS01620 PF00005 ABC transporter JV59_RS01625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JV59_RS01625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JV59_RS01625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JV59_RS01625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JV59_RS01630 PF06165 Glycosyltransferase family 36 JV59_RS01630 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain JV59_RS01635 PF02838 Glycosyl hydrolase family 20, domain 2 JV59_RS01635 PF00728 Glycosyl hydrolase family 20, catalytic domain JV59_RS01640 PF01869 BadF/BadG/BcrA/BcrD ATPase family JV59_RS01650 PF00005 ABC transporter JV59_RS01650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JV59_RS01655 PF00005 ABC transporter JV59_RS01655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JV59_RS01660 PF12911 N-terminal TM domain of oligopeptide transport permease C JV59_RS01660 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS01665 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS01670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JV59_RS01675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS01675 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS01675 PF09308 LuxQ, periplasmic JV59_RS01675 PF00072 Response regulator receiver domain JV59_RS01680 PF05175 Methyltransferase small domain JV59_RS01680 PF08468 Methyltransferase small domain N-terminal JV59_RS01685 PF01594 AI-2E family transporter JV59_RS01690 PF00202 Aminotransferase class-III JV59_RS01695 PF01521 Iron-sulphur cluster biosynthesis JV59_RS01700 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JV59_RS01700 PF00529 HlyD membrane-fusion protein of T1SS JV59_RS01705 PF00873 AcrB/AcrD/AcrF family JV59_RS01710 PF01551 Peptidase family M23 JV59_RS01710 PF08525 Opacity-associated protein A N-terminal motif JV59_RS01710 PF01476 LysM domain JV59_RS01715 PF00579 tRNA synthetases class I (W and Y) JV59_RS01725 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JV59_RS01730 PF13609 Gram-negative porin JV59_RS01735 PF01272 Transcription elongation factor, GreA/GreB, C-term JV59_RS01735 PF03449 Transcription elongation factor, N-terminal JV59_RS01740 PF01985 CRS1 / YhbY (CRM) domain JV59_RS01745 PF01728 FtsJ-like methyltransferase JV59_RS01750 PF17862 AAA+ lid domain JV59_RS01750 PF01434 Peptidase family M41 JV59_RS01750 PF06480 FtsH Extracellular JV59_RS01750 PF00004 ATPase family associated with various cellular activities (AAA) JV59_RS01755 PF00809 Pterin binding enzyme JV59_RS01760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JV59_RS01760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JV59_RS01760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JV59_RS01760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JV59_RS01770 PF00583 Acetyltransferase (GNAT) family JV59_RS01775 PF03707 Bacterial signalling protein N terminal repeat JV59_RS01775 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS01775 PF00563 EAL domain JV59_RS01780 PF03144 Elongation factor Tu domain 2 JV59_RS01780 PF16658 Class II release factor RF3, C-terminal domain JV59_RS01780 PF00009 Elongation factor Tu GTP binding domain JV59_RS01785 PF00270 DEAD/DEAH box helicase JV59_RS01785 PF00271 Helicase conserved C-terminal domain JV59_RS01790 PF05175 Methyltransferase small domain JV59_RS01795 PF05525 Branched-chain amino acid transport protein JV59_RS01800 PF00472 RF-1 domain JV59_RS01800 PF03462 PCRF domain JV59_RS01805 PF00152 tRNA synthetases class II (D, K and N) JV59_RS01805 PF01336 OB-fold nucleic acid binding domain JV59_RS01810 PF01136 Peptidase family U32 JV59_RS01815 PF01136 Peptidase family U32 JV59_RS01820 PF00563 EAL domain JV59_RS01820 PF03707 Bacterial signalling protein N terminal repeat JV59_RS01820 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS01825 PF02036 SCP-2 sterol transfer family JV59_RS01830 PF13508 Acetyltransferase (GNAT) domain JV59_RS01835 PF03840 Preprotein translocase SecG subunit JV59_RS01850 PF02576 RimP N-terminal domain JV59_RS01850 PF17384 RimP C-terminal SH3 domain JV59_RS01855 PF13184 NusA-like KH domain JV59_RS01855 PF00575 S1 RNA binding domain JV59_RS01855 PF08529 NusA N-terminal domain JV59_RS01860 PF00009 Elongation factor Tu GTP binding domain JV59_RS01860 PF04760 Translation initiation factor IF-2, N-terminal region JV59_RS01860 PF08364 Bacterial translation initiation factor IF-2 associated region JV59_RS01860 PF11987 Translation-initiation factor 2 JV59_RS01865 PF02033 Ribosome-binding factor A JV59_RS01870 PF16198 tRNA pseudouridylate synthase B C-terminal domain JV59_RS01870 PF09157 Pseudouridine synthase II TruB, C-terminal JV59_RS01870 PF01509 TruB family pseudouridylate synthase (N terminal domain) JV59_RS01880 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS01880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JV59_RS01885 PF01645 Conserved region in glutamate synthase JV59_RS01885 PF01493 GXGXG motif JV59_RS01885 PF00310 Glutamine amidotransferases class-II JV59_RS01885 PF04898 Glutamate synthase central domain JV59_RS01890 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JV59_RS01890 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS01895 PF01645 Conserved region in glutamate synthase JV59_RS01895 PF04898 Glutamate synthase central domain JV59_RS01895 PF01493 GXGXG motif JV59_RS01895 PF00310 Glutamine amidotransferases class-II JV59_RS01900 PF16199 Radical_SAM C-terminal domain JV59_RS01900 PF04055 Radical SAM superfamily JV59_RS01905 PF01590 GAF domain JV59_RS01905 PF00563 EAL domain JV59_RS01905 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS01905 PF00360 Phytochrome region JV59_RS01910 PF00072 Response regulator receiver domain JV59_RS01910 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS01910 PF18415 Histidine kinase receptor ArcB trans-membrane domain JV59_RS01910 PF01627 Hpt domain JV59_RS01910 PF00989 PAS fold JV59_RS01910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS01920 PF02321 Outer membrane efflux protein JV59_RS01925 PF00293 NUDIX domain JV59_RS01930 PF06853 Protein of unknown function (DUF1249) JV59_RS01935 PF00149 Calcineurin-like phosphoesterase JV59_RS01940 PF05728 Uncharacterised protein family (UPF0227) JV59_RS01945 PF00204 DNA gyrase B JV59_RS01945 PF00986 DNA gyrase B subunit, carboxyl terminus JV59_RS01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS01945 PF01751 Toprim domain JV59_RS01950 PF03989 DNA gyrase C-terminal domain, beta-propeller JV59_RS01950 PF00521 DNA gyrase/topoisomerase IV, subunit A JV59_RS01955 PF13180 PDZ domain JV59_RS01960 PF00595 PDZ domain JV59_RS01965 PF06295 Protein of unknown function (DUF1043) JV59_RS01970 PF03969 AFG1-like ATPase JV59_RS01975 PF00572 Ribosomal protein L13 JV59_RS01980 PF00380 Ribosomal protein S9/S16 JV59_RS01985 PF00355 Rieske [2Fe-2S] domain JV59_RS01985 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JV59_RS01990 PF00032 Cytochrome b(C-terminal)/b6/petD JV59_RS01990 PF00033 Cytochrome b/b6/petB JV59_RS01995 PF02167 Cytochrome C1 family JV59_RS02000 PF00043 Glutathione S-transferase, C-terminal domain JV59_RS02000 PF02798 Glutathione S-transferase, N-terminal domain JV59_RS02005 PF04386 Stringent starvation protein B JV59_RS02010 PF04972 BON domain JV59_RS02015 PF13580 SIS domain JV59_RS02020 PF02021 Uncharacterised protein family UPF0102 JV59_RS02030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JV59_RS02035 PF01795 MraW methylase family JV59_RS02040 PF04999 Cell division protein FtsL JV59_RS02045 PF00905 Penicillin binding protein transpeptidase domain JV59_RS02045 PF03717 Penicillin-binding Protein dimerisation domain JV59_RS02050 PF02875 Mur ligase family, glutamate ligase domain JV59_RS02050 PF01225 Mur ligase family, catalytic domain JV59_RS02050 PF08245 Mur ligase middle domain JV59_RS02055 PF01225 Mur ligase family, catalytic domain JV59_RS02055 PF02875 Mur ligase family, glutamate ligase domain JV59_RS02055 PF08245 Mur ligase middle domain JV59_RS02060 PF00953 Glycosyl transferase family 4 JV59_RS02060 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JV59_RS02065 PF08245 Mur ligase middle domain JV59_RS02065 PF02875 Mur ligase family, glutamate ligase domain JV59_RS02070 PF01098 Cell cycle protein JV59_RS02075 PF04101 Glycosyltransferase family 28 C-terminal domain JV59_RS02075 PF03033 Glycosyltransferase family 28 N-terminal domain JV59_RS02080 PF08245 Mur ligase middle domain JV59_RS02080 PF02875 Mur ligase family, glutamate ligase domain JV59_RS02080 PF01225 Mur ligase family, catalytic domain JV59_RS02085 PF03799 Cell division protein FtsQ JV59_RS02085 PF08478 POTRA domain, FtsQ-type JV59_RS02090 PF02491 SHS2 domain inserted in FTSA JV59_RS02095 PF00091 Tubulin/FtsZ family, GTPase domain JV59_RS02095 PF12327 FtsZ family, C-terminal domain JV59_RS02100 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JV59_RS02105 PF01043 SecA preprotein cross-linking domain JV59_RS02105 PF07516 SecA Wing and Scaffold domain JV59_RS02105 PF07517 SecA DEAD-like domain JV59_RS02105 PF02810 SEC-C motif JV59_RS02110 PF00293 NUDIX domain JV59_RS02115 PF01113 Dihydrodipicolinate reductase, N-terminus JV59_RS02115 PF05173 Dihydrodipicolinate reductase, C-terminus JV59_RS02120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JV59_RS02120 PF00117 Glutamine amidotransferase class-I JV59_RS02130 PF01925 Sulfite exporter TauE/SafE JV59_RS02135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS02135 PF03466 LysR substrate binding domain JV59_RS02140 PF01228 Glycine radical JV59_RS02145 PF01261 Xylose isomerase-like TIM barrel JV59_RS02150 PF03167 Uracil DNA glycosylase superfamily JV59_RS02165 PF01235 Sodium:alanine symporter family JV59_RS02170 PF03883 Peroxide stress protein YaaA JV59_RS02175 PF01026 TatD related DNase JV59_RS02180 PF07662 Na+ dependent nucleoside transporter C-terminus JV59_RS02180 PF07670 Nucleoside recognition JV59_RS02180 PF01773 Na+ dependent nucleoside transporter N-terminus JV59_RS02190 PF01791 DeoC/LacD family aldolase JV59_RS02195 PF02885 Glycosyl transferase family, helical bundle domain JV59_RS02195 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JV59_RS02195 PF00591 Glycosyl transferase family, a/b domain JV59_RS02200 PF01676 Metalloenzyme superfamily JV59_RS02205 PF01048 Phosphorylase superfamily JV59_RS02215 PF18429 Domain of unknown function (DUF5609) JV59_RS02225 PF18073 Rubredoxin metal binding domain JV59_RS02230 PF00266 Aminotransferase class-V JV59_RS02235 PF01965 DJ-1/PfpI family JV59_RS02240 PF08546 Ketopantoate reductase PanE/ApbA C terminal JV59_RS02240 PF02558 Ketopantoate reductase PanE/ApbA JV59_RS02245 PF03502 Nucleoside-specific channel-forming protein, Tsx JV59_RS02255 PF04545 Sigma-70, region 4 JV59_RS02255 PF04542 Sigma-70 region 2 JV59_RS02265 PF07690 Major Facilitator Superfamily JV59_RS02270 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JV59_RS02280 PF05175 Methyltransferase small domain JV59_RS02285 PF01722 BolA-like protein JV59_RS02290 PF11973 NQRA C-terminal domain JV59_RS02290 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JV59_RS02295 PF03116 NQR2, RnfD, RnfE family JV59_RS02300 PF04205 FMN-binding domain JV59_RS02305 PF02508 Rnf-Nqr subunit, membrane protein JV59_RS02310 PF02508 Rnf-Nqr subunit, membrane protein JV59_RS02315 PF00970 Oxidoreductase FAD-binding domain JV59_RS02315 PF00111 2Fe-2S iron-sulfur cluster binding domain JV59_RS02315 PF00175 Oxidoreductase NAD-binding domain JV59_RS02320 PF02424 ApbE family JV59_RS02330 PF00072 Response regulator receiver domain JV59_RS02330 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS02335 PF11798 IMS family HHH motif JV59_RS02335 PF00817 impB/mucB/samB family JV59_RS02335 PF11799 impB/mucB/samB family C-terminal domain JV59_RS02340 PF16124 RecQ zinc-binding JV59_RS02340 PF09382 RQC domain JV59_RS02340 PF00271 Helicase conserved C-terminal domain JV59_RS02340 PF00570 HRDC domain JV59_RS02340 PF00270 DEAD/DEAH box helicase JV59_RS02345 PF01272 Transcription elongation factor, GreA/GreB, C-term JV59_RS02345 PF03449 Transcription elongation factor, N-terminal JV59_RS02355 PF00704 Glycosyl hydrolases family 18 JV59_RS02355 PF06483 Chitinase C JV59_RS02360 PF00209 Sodium:neurotransmitter symporter family JV59_RS02370 PF18030 RimK PreATP-grasp domain JV59_RS02370 PF08443 RimK-like ATP-grasp domain JV59_RS02375 PF08443 RimK-like ATP-grasp domain JV59_RS02375 PF18030 RimK PreATP-grasp domain JV59_RS02380 PF01546 Peptidase family M20/M25/M40 JV59_RS02380 PF07687 Peptidase dimerisation domain JV59_RS02385 PF00860 Permease family JV59_RS02390 PF00156 Phosphoribosyl transferase domain JV59_RS02395 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JV59_RS02400 PF07417 Sigma factor-binding transcriptional regulator Crl JV59_RS02405 PF01472 PUA domain JV59_RS02405 PF00696 Amino acid kinase family JV59_RS02410 PF00171 Aldehyde dehydrogenase family JV59_RS02415 PF03477 ATP cone domain JV59_RS02420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JV59_RS02420 PF01872 RibD C-terminal domain JV59_RS02425 PF00677 Lumazine binding domain JV59_RS02430 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JV59_RS02430 PF00925 GTP cyclohydrolase II JV59_RS02435 PF00885 6,7-dimethyl-8-ribityllumazine synthase JV59_RS02440 PF01029 NusB family JV59_RS02445 PF02769 AIR synthase related protein, C-terminal domain JV59_RS02445 PF00586 AIR synthase related protein, N-terminal domain JV59_RS02450 PF04608 Phosphatidylglycerophosphatase A JV59_RS02455 PF11944 Protein of unknown function (DUF3461) JV59_RS02460 PF01842 ACT domain JV59_RS02460 PF08335 GlnD PII-uridylyltransferase JV59_RS02460 PF01909 Nucleotidyltransferase domain JV59_RS02460 PF01966 HD domain JV59_RS02465 PF00557 Metallopeptidase family M24 JV59_RS02470 PF00318 Ribosomal protein S2 JV59_RS02475 PF00889 Elongation factor TS JV59_RS02480 PF00696 Amino acid kinase family JV59_RS02485 PF01765 Ribosome recycling factor JV59_RS02490 PF01255 Putative undecaprenyl diphosphate synthase JV59_RS02500 PF13288 DXP reductoisomerase C-terminal domain JV59_RS02500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JV59_RS02500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JV59_RS02505 PF02163 Peptidase family M50 JV59_RS02505 PF17820 PDZ domain JV59_RS02510 PF01103 Surface antigen JV59_RS02510 PF07244 Surface antigen variable number repeat JV59_RS02515 PF03938 Outer membrane protein (OmpH-like) JV59_RS02520 PF00132 Bacterial transferase hexapeptide (six repeats) JV59_RS02520 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JV59_RS02525 PF07977 FabA-like domain JV59_RS02530 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JV59_RS02530 PF00132 Bacterial transferase hexapeptide (six repeats) JV59_RS02535 PF02684 Lipid-A-disaccharide synthetase JV59_RS02540 PF01351 Ribonuclease HII JV59_RS02545 PF02811 PHP domain JV59_RS02545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JV59_RS02545 PF14579 Helix-hairpin-helix motif JV59_RS02545 PF07733 Bacterial DNA polymerase III alpha NTPase domain JV59_RS02545 PF01336 OB-fold nucleic acid binding domain JV59_RS02550 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JV59_RS02555 PF09179 TilS substrate binding domain JV59_RS02555 PF01171 PP-loop family JV59_RS02555 PF11734 TilS substrate C-terminal domain JV59_RS02560 PF00034 Cytochrome c JV59_RS02565 PF00543 Nitrogen regulatory protein P-II JV59_RS02570 PF03372 Endonuclease/Exonuclease/phosphatase family JV59_RS02580 PF01476 LysM domain JV59_RS02580 PF01464 Transglycosylase SLT domain JV59_RS02585 PF16123 Hydroxyacylglutathione hydrolase C-terminus JV59_RS02585 PF00753 Metallo-beta-lactamase superfamily JV59_RS02590 PF08241 Methyltransferase domain JV59_RS02595 PF00075 RNase H JV59_RS02600 PF00929 Exonuclease JV59_RS02610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JV59_RS02610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JV59_RS02610 PF09317 Domain of unknown function (DUF1974) JV59_RS02610 PF02770 Acyl-CoA dehydrogenase, middle domain JV59_RS02615 PF13580 SIS domain JV59_RS02620 PF13230 Glutamine amidotransferases class-II JV59_RS02625 PF03129 Anticodon binding domain JV59_RS02625 PF04073 Aminoacyl-tRNA editing domain JV59_RS02625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JV59_RS02630 PF01980 tRNA-methyltransferase O JV59_RS02630 PF18389 TrmO C-terminal domain JV59_RS02635 PF01197 Ribosomal protein L31 JV59_RS02640 PF00444 Ribosomal protein L36 JV59_RS02645 PF03806 AbgT putative transporter family JV59_RS02655 PF03180 NLPA lipoprotein JV59_RS02660 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS02665 PF00005 ABC transporter JV59_RS02665 PF09383 NIL domain JV59_RS02680 PF00356 Bacterial regulatory proteins, lacI family JV59_RS02685 PF02378 Phosphotransferase system, EIIC JV59_RS02685 PF00367 phosphotransferase system, EIIB JV59_RS02690 PF00128 Alpha amylase, catalytic domain JV59_RS02690 PF16657 Maltogenic Amylase, C-terminal domain JV59_RS02710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JV59_RS02715 PF00873 AcrB/AcrD/AcrF family JV59_RS02740 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JV59_RS02740 PF04055 Radical SAM superfamily JV59_RS02745 PF03099 Biotin/lipoate A/B protein ligase family JV59_RS02750 PF04359 Protein of unknown function (DUF493) JV59_RS02755 PF00768 D-alanyl-D-alanine carboxypeptidase JV59_RS02755 PF07943 Penicillin-binding protein 5, C-terminal domain JV59_RS02760 PF05036 Sporulation related domain JV59_RS02760 PF03330 Lytic transglycolase JV59_RS02765 PF01098 Cell cycle protein JV59_RS02770 PF03717 Penicillin-binding Protein dimerisation domain JV59_RS02770 PF00905 Penicillin binding protein transpeptidase domain JV59_RS02775 PF02590 Predicted SPOUT methyltransferase JV59_RS02785 PF06144 DNA polymerase III, delta subunit JV59_RS02785 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JV59_RS02790 PF04390 Lipopolysaccharide-assembly JV59_RS02795 PF08264 Anticodon-binding domain of tRNA JV59_RS02795 PF13603 Leucyl-tRNA synthetase, Domain 2 JV59_RS02795 PF00133 tRNA synthetases class I (I, L, M and V) JV59_RS02800 PF07295 Zinc-ribbon containing domain JV59_RS02805 PF00795 Carbon-nitrogen hydrolase JV59_RS02810 PF00571 CBS domain JV59_RS02810 PF03471 Transporter associated domain JV59_RS02815 PF02130 Uncharacterized protein family UPF0054 JV59_RS02820 PF02562 PhoH-like protein JV59_RS02825 PF04055 Radical SAM superfamily JV59_RS02825 PF01938 TRAM domain JV59_RS02825 PF00919 Uncharacterized protein family UPF0004 JV59_RS02830 PF01494 FAD binding domain JV59_RS02835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JV59_RS02840 PF02896 PEP-utilising enzyme, TIM barrel domain JV59_RS02840 PF00391 PEP-utilising enzyme, mobile domain JV59_RS02840 PF05524 PEP-utilising enzyme, N-terminal JV59_RS02845 PF00381 PTS HPr component phosphorylation site JV59_RS02850 PF00291 Pyridoxal-phosphate dependent enzyme JV59_RS02860 PF04354 ZipA, C-terminal FtsZ-binding domain JV59_RS02865 PF00533 BRCA1 C Terminus (BRCT) domain JV59_RS02865 PF01653 NAD-dependent DNA ligase adenylation domain JV59_RS02865 PF03120 NAD-dependent DNA ligase OB-fold domain JV59_RS02865 PF12826 Helix-hairpin-helix motif JV59_RS02865 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JV59_RS02870 PF13609 Gram-negative porin JV59_RS02885 PF16200 C-terminal region of band_7 JV59_RS02885 PF01145 SPFH domain / Band 7 family JV59_RS02890 PF00085 Thioredoxin JV59_RS02895 PF00106 short chain dehydrogenase JV59_RS02900 PF01370 NAD dependent epimerase/dehydratase family JV59_RS02900 PF08338 Domain of unknown function (DUF1731) JV59_RS02905 PF07556 Protein of unknown function (DUF1538) JV59_RS02910 PF07556 Protein of unknown function (DUF1538) JV59_RS02925 PF12850 Calcineurin-like phosphoesterase superfamily domain JV59_RS02940 PF17323 Trans-membrane regulatory protein ToxS JV59_RS02945 PF00486 Transcriptional regulatory protein, C terminal JV59_RS02950 PF00183 Hsp90 protein JV59_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS02955 PF05191 Adenylate kinase, active site lid JV59_RS02960 PF00762 Ferrochelatase JV59_RS02980 PF00403 Heavy-metal-associated domain JV59_RS02985 PF13609 Gram-negative porin JV59_RS02995 PF00749 tRNA synthetases class I (E and Q), catalytic domain JV59_RS03000 PF00691 OmpA family JV59_RS03000 PF01389 OmpA-like transmembrane domain JV59_RS03005 PF01389 OmpA-like transmembrane domain JV59_RS03005 PF00691 OmpA family JV59_RS03030 PF05175 Methyltransferase small domain JV59_RS03070 PF04316 Anti-sigma-28 factor, FlgM JV59_RS03080 PF01584 CheW-like domain JV59_RS03080 PF00072 Response regulator receiver domain JV59_RS03085 PF03705 CheR methyltransferase, all-alpha domain JV59_RS03085 PF01739 CheR methyltransferase, SAM binding domain JV59_RS03090 PF00460 Flagella basal body rod protein JV59_RS03095 PF00460 Flagella basal body rod protein JV59_RS03095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JV59_RS03100 PF13860 FlgD Ig-like domain JV59_RS03100 PF03963 Flagellar hook capping protein - N-terminal region JV59_RS03100 PF13861 FlgD Tudor-like domain JV59_RS03105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JV59_RS03105 PF00460 Flagella basal body rod protein JV59_RS03105 PF07559 Flagellar basal body protein FlaE JV59_RS03110 PF00460 Flagella basal body rod protein JV59_RS03110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JV59_RS03115 PF00460 Flagella basal body rod protein JV59_RS03115 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JV59_RS03120 PF02107 Flagellar L-ring protein JV59_RS03125 PF02119 Flagellar P-ring protein JV59_RS03130 PF10135 Rod binding protein JV59_RS03130 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JV59_RS03135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JV59_RS03135 PF07196 Flagellin hook IN motif JV59_RS03140 PF00700 Bacterial flagellin C-terminal helical region JV59_RS03140 PF00669 Bacterial flagellin N-terminal helical region JV59_RS03145 PF00669 Bacterial flagellin N-terminal helical region JV59_RS03145 PF07196 Flagellin hook IN motif JV59_RS03145 PF00700 Bacterial flagellin C-terminal helical region JV59_RS03150 PF07196 Flagellin hook IN motif JV59_RS03150 PF00700 Bacterial flagellin C-terminal helical region JV59_RS03150 PF00669 Bacterial flagellin N-terminal helical region JV59_RS03205 PF01926 50S ribosome-binding GTPase JV59_RS03205 PF06071 Protein of unknown function (DUF933) JV59_RS03210 PF01195 Peptidyl-tRNA hydrolase JV59_RS03215 PF14572 Phosphoribosyl synthetase-associated domain JV59_RS03215 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JV59_RS03220 PF00288 GHMP kinases N terminal domain JV59_RS03220 PF08544 GHMP kinases C terminal JV59_RS03225 PF03550 Outer membrane lipoprotein LolB JV59_RS03230 PF01488 Shikimate / quinate 5-dehydrogenase JV59_RS03230 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JV59_RS03230 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JV59_RS03235 PF03462 PCRF domain JV59_RS03235 PF00472 RF-1 domain JV59_RS03240 PF17827 PrmC N-terminal domain JV59_RS03240 PF13847 Methyltransferase domain JV59_RS03250 PF13369 Transglutaminase-like superfamily JV59_RS03255 PF00793 DAHP synthetase I family JV59_RS03260 PF02872 5'-nucleotidase, C-terminal domain JV59_RS03260 PF00149 Calcineurin-like phosphoesterase JV59_RS03265 PF04073 Aminoacyl-tRNA editing domain JV59_RS03270 PF00860 Permease family JV59_RS03285 PF03358 NADPH-dependent FMN reductase JV59_RS03290 PF03960 ArsC family JV59_RS03295 PF13181 Tetratricopeptide repeat JV59_RS03295 PF01435 Peptidase family M48 JV59_RS03305 PF01594 AI-2E family transporter JV59_RS03310 PF02743 Cache domain JV59_RS03310 PF00672 HAMP domain JV59_RS03310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS03315 PF00578 AhpC/TSA family JV59_RS03320 PF01842 ACT domain JV59_RS03325 PF00701 Dihydrodipicolinate synthetase family JV59_RS03330 PF06804 NlpB/DapX lipoprotein JV59_RS03335 PF03553 Na+/H+ antiporter family JV59_RS03335 PF13726 Na+-H+ antiporter family JV59_RS03340 PF00929 Exonuclease JV59_RS03345 PF00691 OmpA family JV59_RS03345 PF18393 MotY N-terminal domain JV59_RS03350 PF10952 Protein of unknown function (DUF2753) JV59_RS03355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JV59_RS03360 PF00633 Helix-hairpin-helix motif JV59_RS03360 PF00730 HhH-GPD superfamily base excision DNA repair protein JV59_RS03360 PF10576 Iron-sulfur binding domain of endonuclease III JV59_RS03365 PF02508 Rnf-Nqr subunit, membrane protein JV59_RS03370 PF04205 FMN-binding domain JV59_RS03375 PF03116 NQR2, RnfD, RnfE family JV59_RS03380 PF10531 SLBB domain JV59_RS03380 PF13375 RnfC Barrel sandwich hybrid domain JV59_RS03380 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JV59_RS03380 PF12838 4Fe-4S dicluster domain JV59_RS03385 PF04060 Putative Fe-S cluster JV59_RS03390 PF02508 Rnf-Nqr subunit, membrane protein JV59_RS03395 PF01476 LysM domain JV59_RS03395 PF01464 Transglycosylase SLT domain JV59_RS03415 PF00460 Flagella basal body rod protein JV59_RS03420 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JV59_RS03420 PF00460 Flagella basal body rod protein JV59_RS03425 PF13861 FlgD Tudor-like domain JV59_RS03425 PF13860 FlgD Ig-like domain JV59_RS03425 PF03963 Flagellar hook capping protein - N-terminal region JV59_RS03430 PF00460 Flagella basal body rod protein JV59_RS03430 PF07559 Flagellar basal body protein FlaE JV59_RS03430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JV59_RS03435 PF00460 Flagella basal body rod protein JV59_RS03435 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JV59_RS03440 PF00460 Flagella basal body rod protein JV59_RS03440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JV59_RS03445 PF02107 Flagellar L-ring protein JV59_RS03450 PF02119 Flagellar P-ring protein JV59_RS03455 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JV59_RS03455 PF10135 Rod binding protein JV59_RS03480 PF00691 OmpA family JV59_RS03480 PF13677 Membrane MotB of proton-channel complex MotA/MotB JV59_RS03485 PF01618 MotA/TolQ/ExbB proton channel family JV59_RS03490 PF04545 Sigma-70, region 4 JV59_RS03490 PF04542 Sigma-70 region 2 JV59_RS03495 PF03748 Flagellar basal body-associated protein FliL JV59_RS03510 PF02561 Flagellar protein FliS JV59_RS03515 PF07196 Flagellin hook IN motif JV59_RS03515 PF07195 Flagellar hook-associated protein 2 C-terminus JV59_RS03515 PF02465 Flagellar hook-associated protein 2 N-terminus JV59_RS03520 PF00700 Bacterial flagellin C-terminal helical region JV59_RS03520 PF00669 Bacterial flagellin N-terminal helical region JV59_RS03530 PF00771 FHIPEP family JV59_RS03535 PF01312 FlhB HrpN YscU SpaS Family JV59_RS03540 PF01311 Bacterial export proteins, family 1 JV59_RS03545 PF01313 Bacterial export proteins, family 3 JV59_RS03550 PF00813 FliP family JV59_RS03555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JV59_RS03565 PF13488 Glycine zipper JV59_RS03565 PF00691 OmpA family JV59_RS03570 PF00072 Response regulator receiver domain JV59_RS03570 PF00158 Sigma-54 interaction domain JV59_RS03570 PF02954 Bacterial regulatory protein, Fis family JV59_RS03575 PF02049 Flagellar hook-basal body complex protein FliE JV59_RS03580 PF01514 Secretory protein of YscJ/FliF family JV59_RS03580 PF08345 Flagellar M-ring protein C-terminal JV59_RS03585 PF14842 FliG N-terminal domain JV59_RS03585 PF14841 FliG middle domain JV59_RS03585 PF01706 FliG C-terminal domain JV59_RS03595 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JV59_RS03595 PF18269 T3SS EscN ATPase C-terminal domain JV59_RS03610 PF01551 Peptidase family M23 JV59_RS03610 PF04225 Opacity-associated protein A LysM-like domain JV59_RS03620 PF17757 UvrB interaction domain JV59_RS03620 PF12344 Ultra-violet resistance protein B JV59_RS03620 PF00271 Helicase conserved C-terminal domain JV59_RS03620 PF04851 Type III restriction enzyme, res subunit JV59_RS03620 PF02151 UvrB/uvrC motif JV59_RS03625 PF00158 Sigma-54 interaction domain JV59_RS03625 PF02954 Bacterial regulatory protein, Fis family JV59_RS03625 PF00072 Response regulator receiver domain JV59_RS03630 PF01627 Hpt domain JV59_RS03635 PF01933 Uncharacterised protein family UPF0052 JV59_RS03640 PF06463 Molybdenum Cofactor Synthesis C JV59_RS03640 PF04055 Radical SAM superfamily JV59_RS03645 PF00994 Probable molybdopterin binding domain JV59_RS03650 PF01967 MoaC family JV59_RS03655 PF02597 ThiS family JV59_RS03660 PF02391 MoaE protein JV59_RS03665 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS03675 PF02272 DHHA1 domain JV59_RS03675 PF01743 Poly A polymerase head domain JV59_RS03675 PF01368 DHH family JV59_RS03675 PF00571 CBS domain JV59_RS03680 PF01554 MatE JV59_RS03685 PF00403 Heavy-metal-associated domain JV59_RS03690 PF01048 Phosphorylase superfamily JV59_RS03715 PF01588 Putative tRNA binding domain JV59_RS03715 PF09334 tRNA synthetases class I (M) JV59_RS03720 PF10609 NUBPL iron-transfer P-loop NTPase JV59_RS03725 PF00485 Phosphoribulokinase / Uridine kinase family JV59_RS03730 PF05170 AsmA family JV59_RS03740 PF12557 Cob(I)alamin adenosyltransferase N terminal JV59_RS03740 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JV59_RS03750 PF01227 GTP cyclohydrolase I JV59_RS03755 PF02152 Dihydroneopterin aldolase JV59_RS03760 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JV59_RS03760 PF01227 GTP cyclohydrolase I JV59_RS03765 PF01451 Low molecular weight phosphotyrosine protein phosphatase JV59_RS03780 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JV59_RS03780 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JV59_RS03785 PF00462 Glutaredoxin JV59_RS03790 PF01131 DNA topoisomerase JV59_RS03790 PF01751 Toprim domain JV59_RS03800 PF01161 Phosphatidylethanolamine-binding protein JV59_RS03805 PF00106 short chain dehydrogenase JV59_RS03810 PF00850 Histone deacetylase domain JV59_RS03815 PF13344 Haloacid dehalogenase-like hydrolase JV59_RS03815 PF00293 NUDIX domain JV59_RS03835 PF00158 Sigma-54 interaction domain JV59_RS03835 PF00072 Response regulator receiver domain JV59_RS03835 PF02954 Bacterial regulatory protein, Fis family JV59_RS03840 PF08448 PAS fold JV59_RS03840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS03840 PF08447 PAS fold JV59_RS03855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS03855 PF00672 HAMP domain JV59_RS03855 PF02743 Cache domain JV59_RS03865 PF00672 HAMP domain JV59_RS03865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS03865 PF02743 Cache domain JV59_RS03875 PF00884 Sulfatase JV59_RS03875 PF11893 Domain of unknown function (DUF3413) JV59_RS03880 PF07208 Protein of unknown function (DUF1414) JV59_RS03885 PF04245 37-kD nucleoid-associated bacterial protein JV59_RS03905 PF03553 Na+/H+ antiporter family JV59_RS03910 PF02774 Semialdehyde dehydrogenase, dimerisation domain JV59_RS03910 PF01118 Semialdehyde dehydrogenase, NAD binding domain JV59_RS03915 PF00027 Cyclic nucleotide-binding domain JV59_RS03915 PF00520 Ion transport protein JV59_RS03920 PF01914 MarC family integral membrane protein JV59_RS03925 PF00465 Iron-containing alcohol dehydrogenase JV59_RS03925 PF00171 Aldehyde dehydrogenase family JV59_RS03930 PF03776 Septum formation topological specificity factor MinE JV59_RS03940 PF05209 Septum formation inhibitor MinC, N-terminal domain JV59_RS03940 PF03775 Septum formation inhibitor MinC, C-terminal domain JV59_RS03945 PF05166 YcgL domain JV59_RS03950 PF13406 Transglycosylase SLT domain JV59_RS03955 PF03466 LysR substrate binding domain JV59_RS03955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS03960 PF07670 Nucleoside recognition JV59_RS03960 PF07662 Na+ dependent nucleoside transporter C-terminus JV59_RS03960 PF01773 Na+ dependent nucleoside transporter N-terminus JV59_RS03970 PF03692 Putative zinc- or iron-chelating domain JV59_RS03975 PF05552 Conserved TM helix JV59_RS03975 PF00924 Mechanosensitive ion channel JV59_RS03985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JV59_RS03995 PF00245 Alkaline phosphatase JV59_RS04010 PF13847 Methyltransferase domain JV59_RS04020 PF01263 Aldose 1-epimerase JV59_RS04025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JV59_RS04025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JV59_RS04040 PF07023 Protein of unknown function (DUF1315) JV59_RS04045 PF02810 SEC-C motif JV59_RS04050 PF00563 EAL domain JV59_RS04050 PF08668 HDOD domain JV59_RS04055 PF00149 Calcineurin-like phosphoesterase JV59_RS04060 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JV59_RS04065 PF09190 DALR domain JV59_RS04065 PF01406 tRNA synthetases class I (C) catalytic domain JV59_RS04070 PF00265 Thymidine kinase JV59_RS04075 PF01176 Translation initiation factor 1A / IF-1 JV59_RS04080 PF04377 Arginine-tRNA-protein transferase, C terminus JV59_RS04080 PF04376 Arginine-tRNA-protein transferase, N terminus JV59_RS04085 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JV59_RS04095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JV59_RS04100 PF10692 Protein of unknown function (DUF2498) JV59_RS04105 PF01396 Topoisomerase DNA binding C4 zinc finger JV59_RS04105 PF01751 Toprim domain JV59_RS04105 PF08272 Topoisomerase I zinc-ribbon-like JV59_RS04105 PF01131 DNA topoisomerase JV59_RS04110 PF00483 Nucleotidyl transferase JV59_RS04115 PF08323 Starch synthase catalytic domain JV59_RS04115 PF00534 Glycosyl transferases group 1 JV59_RS04135 PF04994 TfoX C-terminal domain JV59_RS04135 PF04993 TfoX N-terminal domain JV59_RS04140 PF00356 Bacterial regulatory proteins, lacI family JV59_RS04145 PF02613 Nitrate reductase delta subunit JV59_RS04150 PF00072 Response regulator receiver domain JV59_RS04150 PF00486 Transcriptional regulatory protein, C terminal JV59_RS04155 PF02698 DUF218 domain JV59_RS04160 PF13847 Methyltransferase domain JV59_RS04165 PF03882 MukF winged-helix domain JV59_RS04165 PF17192 MukF middle domain JV59_RS04165 PF17193 MukF C-terminal domain JV59_RS04170 PF04288 MukE-like family JV59_RS04180 PF12833 Helix-turn-helix domain JV59_RS04180 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JV59_RS04185 PF00171 Aldehyde dehydrogenase family JV59_RS04190 PF05199 GMC oxidoreductase JV59_RS04190 PF00732 GMC oxidoreductase JV59_RS04205 PF08443 RimK-like ATP-grasp domain JV59_RS04205 PF18030 RimK PreATP-grasp domain JV59_RS04215 PF13649 Methyltransferase domain JV59_RS04220 PF01904 Protein of unknown function DUF72 JV59_RS04225 PF02938 GAD domain JV59_RS04225 PF00152 tRNA synthetases class II (D, K and N) JV59_RS04225 PF01336 OB-fold nucleic acid binding domain JV59_RS04230 PF00849 RNA pseudouridylate synthase JV59_RS04235 PF03971 Monomeric isocitrate dehydrogenase JV59_RS04240 PF00313 'Cold-shock' DNA-binding domain JV59_RS04245 PF02617 ATP-dependent Clp protease adaptor protein ClpS JV59_RS04250 PF00004 ATPase family associated with various cellular activities (AAA) JV59_RS04250 PF17871 AAA lid domain JV59_RS04250 PF02861 Clp amino terminal domain, pathogenicity island component JV59_RS04250 PF10431 C-terminal, D2-small domain, of ClpB protein JV59_RS04250 PF07724 AAA domain (Cdc48 subfamily) JV59_RS04275 PF01226 Formate/nitrite transporter JV59_RS04280 PF03649 Uncharacterised protein family (UPF0014) JV59_RS04285 PF06796 Periplasmic nitrate reductase protein NapE JV59_RS04290 PF03264 NapC/NirT cytochrome c family, N-terminal region JV59_RS04295 PF00384 Molybdopterin oxidoreductase JV59_RS04295 PF18364 Molybdopterin oxidoreductase N-terminal domain JV59_RS04295 PF01568 Molydopterin dinucleotide binding domain JV59_RS04305 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JV59_RS04310 PF00106 short chain dehydrogenase JV59_RS04330 PF02075 Crossover junction endodeoxyribonuclease RuvC JV59_RS04335 PF02203 Tar ligand binding domain homologue JV59_RS04335 PF00672 HAMP domain JV59_RS04335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS04340 PF07499 RuvA, C-terminal domain JV59_RS04340 PF01330 RuvA N terminal domain JV59_RS04345 PF05496 Holliday junction DNA helicase RuvB P-loop domain JV59_RS04345 PF17864 RuvB AAA lid domain JV59_RS04345 PF05491 RuvB C-terminal winged helix domain JV59_RS04350 PF01654 Cytochrome bd terminal oxidase subunit I JV59_RS04355 PF02322 Cytochrome bd terminal oxidase subunit II JV59_RS04370 PF03061 Thioesterase superfamily JV59_RS04375 PF01618 MotA/TolQ/ExbB proton channel family JV59_RS04380 PF02472 Biopolymer transport protein ExbD/TolR JV59_RS04390 PF04052 TolB amino-terminal domain JV59_RS04390 PF07676 WD40-like Beta Propeller Repeat JV59_RS04395 PF00691 OmpA family JV59_RS04400 PF13174 Tetratricopeptide repeat JV59_RS04400 PF16331 TolA binding protein trimerisation JV59_RS04405 PF02445 Quinolinate synthetase A protein JV59_RS04410 PF02600 Disulfide bond formation protein DsbB JV59_RS04430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS04430 PF00072 Response regulator receiver domain JV59_RS04430 PF09308 LuxQ, periplasmic JV59_RS04430 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS04435 PF06610 L-alanine exporter JV59_RS04450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JV59_RS04455 PF01161 Phosphatidylethanolamine-binding protein JV59_RS04460 PF12804 MobA-like NTP transferase domain JV59_RS04460 PF03479 Plants and Prokaryotes Conserved (PCC) domain JV59_RS04460 PF00132 Bacterial transferase hexapeptide (six repeats) JV59_RS04470 PF01238 Phosphomannose isomerase type I JV59_RS04475 PF00480 ROK family JV59_RS04490 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS04490 PF00672 HAMP domain JV59_RS04490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS04495 PF00072 Response regulator receiver domain JV59_RS04495 PF00486 Transcriptional regulatory protein, C terminal JV59_RS04500 PF00535 Glycosyl transferase family 2 JV59_RS04505 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JV59_RS04520 PF00440 Bacterial regulatory proteins, tetR family JV59_RS04520 PF16295 Tetracyclin repressor-like, C-terminal domain JV59_RS04525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JV59_RS04525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JV59_RS04525 PF02770 Acyl-CoA dehydrogenase, middle domain JV59_RS04525 PF09317 Domain of unknown function (DUF1974) JV59_RS04530 PF12241 Trans-2-enoyl-CoA reductase catalytic region JV59_RS04530 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JV59_RS04530 PF07055 Enoyl reductase FAD binding domain JV59_RS04535 PF03372 Endonuclease/Exonuclease/phosphatase family JV59_RS04540 PF00672 HAMP domain JV59_RS04540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS04560 PF01925 Sulfite exporter TauE/SafE JV59_RS04565 PF13307 Helicase C-terminal domain JV59_RS04565 PF06733 DEAD_2 JV59_RS04575 PF00202 Aminotransferase class-III JV59_RS04580 PF06968 Biotin and Thiamin Synthesis associated domain JV59_RS04580 PF04055 Radical SAM superfamily JV59_RS04585 PF00155 Aminotransferase class I and II JV59_RS04590 PF12697 Alpha/beta hydrolase family JV59_RS04590 PF08241 Methyltransferase domain JV59_RS04600 PF01435 Peptidase family M48 JV59_RS04610 PF00561 alpha/beta hydrolase fold JV59_RS04610 PF00106 short chain dehydrogenase JV59_RS04635 PF16036 Chalcone isomerase-like JV59_RS04645 PF00206 Lyase JV59_RS04645 PF08328 Adenylosuccinate lyase C-terminal JV59_RS04650 PF04356 Protein of unknown function (DUF489) JV59_RS04665 PF00294 pfkB family carbohydrate kinase JV59_RS04670 PF00816 H-NS histone family JV59_RS04675 PF03553 Na+/H+ antiporter family JV59_RS04680 PF08029 HisG, C-terminal domain JV59_RS04680 PF01634 ATP phosphoribosyltransferase JV59_RS04685 PF00815 Histidinol dehydrogenase JV59_RS04690 PF00155 Aminotransferase class I and II JV59_RS04695 PF00475 Imidazoleglycerol-phosphate dehydratase JV59_RS04695 PF08645 Polynucleotide kinase 3 phosphatase JV59_RS04700 PF00117 Glutamine amidotransferase class-I JV59_RS04705 PF00977 Histidine biosynthesis protein JV59_RS04710 PF00977 Histidine biosynthesis protein JV59_RS04715 PF01502 Phosphoribosyl-AMP cyclohydrolase JV59_RS04715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JV59_RS04720 PF01709 Transcriptional regulator JV59_RS04730 PF01368 DHH family JV59_RS04730 PF02833 DHHA2 domain JV59_RS04745 PF00005 ABC transporter JV59_RS04750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JV59_RS04750 PF00005 ABC transporter JV59_RS04755 PF12911 N-terminal TM domain of oligopeptide transport permease C JV59_RS04755 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS04760 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS04765 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JV59_RS04770 PF02954 Bacterial regulatory protein, Fis family JV59_RS04770 PF00158 Sigma-54 interaction domain JV59_RS04775 PF04012 PspA/IM30 family JV59_RS04780 PF06667 Phage shock protein B JV59_RS04785 PF04024 PspC domain JV59_RS04790 PF00529 HlyD membrane-fusion protein of T1SS JV59_RS04790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JV59_RS04795 PF13533 Biotin-lipoyl like JV59_RS04800 PF00873 AcrB/AcrD/AcrF family JV59_RS04805 PF03352 Methyladenine glycosylase JV59_RS04810 PF03280 Proteobacterial lipase chaperone protein JV59_RS04815 PF00561 alpha/beta hydrolase fold JV59_RS04820 PF01053 Cys/Met metabolism PLP-dependent enzyme JV59_RS04825 PF13091 PLD-like domain JV59_RS04825 PF13396 Phospholipase_D-nuclease N-terminal JV59_RS04830 PF00209 Sodium:neurotransmitter symporter family JV59_RS04835 PF00849 RNA pseudouridylate synthase JV59_RS04840 PF17785 PUA-like domain JV59_RS04840 PF10672 S-adenosylmethionine-dependent methyltransferase JV59_RS04845 PF01066 CDP-alcohol phosphatidyltransferase JV59_RS04850 PF00005 ABC transporter JV59_RS04855 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS04860 PF13416 Bacterial extracellular solute-binding protein JV59_RS04870 PF06945 Protein of unknown function (DUF1289) JV59_RS04885 PF03795 YCII-related domain JV59_RS04890 PF03061 Thioesterase superfamily JV59_RS04895 PF04279 Intracellular septation protein A JV59_RS04905 PF00072 Response regulator receiver domain JV59_RS04905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS04910 PF00072 Response regulator receiver domain JV59_RS04910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS04915 PF17327 Acyl homoserine lactone synthase JV59_RS04920 PF00216 Bacterial DNA-binding protein JV59_RS04925 PF04269 Protein of unknown function, DUF440 JV59_RS04930 PF01132 Elongation factor P (EF-P) OB domain JV59_RS04930 PF09285 Elongation factor P, C-terminal JV59_RS04930 PF08207 Elongation factor P (EF-P) KOW-like domain JV59_RS04940 PF16458 Beta-prism lectin JV59_RS04940 PF07968 Leukocidin/Hemolysin toxin family JV59_RS04940 PF12563 Hemolytic toxin N terminal JV59_RS04945 PF00136 DNA polymerase family B JV59_RS04945 PF03104 DNA polymerase family B, exonuclease domain JV59_RS04960 PF00196 Bacterial regulatory proteins, luxR family JV59_RS04960 PF00072 Response regulator receiver domain JV59_RS04965 PF01541 GIY-YIG catalytic domain JV59_RS04965 PF08459 UvrC Helix-hairpin-helix N-terminal JV59_RS04965 PF02151 UvrB/uvrC motif JV59_RS04970 PF01066 CDP-alcohol phosphatidyltransferase JV59_RS04995 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JV59_RS05005 PF07995 Glucose / Sorbosone dehydrogenase JV59_RS05030 PF17158 Membrane-associated sensor, integral membrane domain JV59_RS05030 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS05035 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JV59_RS05035 PF01409 tRNA synthetases class II core domain (F) JV59_RS05040 PF03483 B3/4 domain JV59_RS05040 PF03484 tRNA synthetase B5 domain JV59_RS05040 PF03147 Ferredoxin-fold anticodon binding domain JV59_RS05040 PF01588 Putative tRNA binding domain JV59_RS05040 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JV59_RS05085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS05085 PF03466 LysR substrate binding domain JV59_RS05090 PF02678 Pirin JV59_RS05090 PF17954 Quercetinase C-terminal cupin domain JV59_RS05095 PF00857 Isochorismatase family JV59_RS05105 PF02378 Phosphotransferase system, EIIC JV59_RS05105 PF00367 phosphotransferase system, EIIB JV59_RS05110 PF00356 Bacterial regulatory proteins, lacI family JV59_RS05115 PF11471 Maltoporin periplasmic N-terminal extension JV59_RS05115 PF02264 LamB porin JV59_RS05120 PF00251 Glycosyl hydrolases family 32 N-terminal domain JV59_RS05120 PF08244 Glycosyl hydrolases family 32 C terminal JV59_RS05130 PF12729 Four helix bundle sensory module for signal transduction JV59_RS05130 PF00672 HAMP domain JV59_RS05130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS05140 PF08668 HDOD domain JV59_RS05140 PF00563 EAL domain JV59_RS05145 PF00294 pfkB family carbohydrate kinase JV59_RS05150 PF13407 Periplasmic binding protein domain JV59_RS05150 PF00356 Bacterial regulatory proteins, lacI family JV59_RS05160 PF01554 MatE JV59_RS05165 PF03466 LysR substrate binding domain JV59_RS05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS05175 PF09330 D-lactate dehydrogenase, membrane binding JV59_RS05175 PF01565 FAD binding domain JV59_RS05185 PF02653 Branched-chain amino acid transport system / permease component JV59_RS05190 PF00005 ABC transporter JV59_RS05195 PF13407 Periplasmic binding protein domain JV59_RS05200 PF00294 pfkB family carbohydrate kinase JV59_RS05205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JV59_RS05205 PF00205 Thiamine pyrophosphate enzyme, central domain JV59_RS05205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JV59_RS05210 PF01261 Xylose isomerase-like TIM barrel JV59_RS05215 PF00171 Aldehyde dehydrogenase family JV59_RS05240 PF00672 HAMP domain JV59_RS05240 PF02743 Cache domain JV59_RS05240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS05275 PF00873 AcrB/AcrD/AcrF family JV59_RS05300 PF03466 LysR substrate binding domain JV59_RS05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS05310 PF04403 Paraquat-inducible protein A JV59_RS05315 PF02470 MlaD protein JV59_RS05330 PF01144 Coenzyme A transferase JV59_RS05335 PF01144 Coenzyme A transferase JV59_RS05340 PF02803 Thiolase, C-terminal domain JV59_RS05340 PF00108 Thiolase, N-terminal domain JV59_RS05355 PF03466 LysR substrate binding domain JV59_RS05355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS05360 PF00083 Sugar (and other) transporter JV59_RS05365 PF01261 Xylose isomerase-like TIM barrel JV59_RS05370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JV59_RS05370 PF00205 Thiamine pyrophosphate enzyme, central domain JV59_RS05370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JV59_RS05375 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JV59_RS05375 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JV59_RS05380 PF00294 pfkB family carbohydrate kinase JV59_RS05390 PF01116 Fructose-bisphosphate aldolase class-II JV59_RS05410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JV59_RS05410 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JV59_RS05415 PF02719 Polysaccharide biosynthesis protein JV59_RS05420 PF00535 Glycosyl transferase family 2 JV59_RS05420 PF02709 N-terminal domain of galactosyltransferase JV59_RS05425 PF07690 Major Facilitator Superfamily JV59_RS05435 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JV59_RS05445 PF00072 Response regulator receiver domain JV59_RS05455 PF00072 Response regulator receiver domain JV59_RS05455 PF09308 LuxQ, periplasmic JV59_RS05455 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS05455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS05460 PF09308 LuxQ, periplasmic JV59_RS05460 PF00072 Response regulator receiver domain JV59_RS05460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS05460 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS05465 PF03150 Di-haem cytochrome c peroxidase JV59_RS05465 PF00034 Cytochrome c JV59_RS05465 PF14376 Haem-binding domain JV59_RS05470 PF02321 Outer membrane efflux protein JV59_RS05480 PF00873 AcrB/AcrD/AcrF family JV59_RS05485 PF00486 Transcriptional regulatory protein, C terminal JV59_RS05485 PF00072 Response regulator receiver domain JV59_RS05490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS05490 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS05490 PF08521 Two-component sensor kinase N-terminal JV59_RS05500 PF00356 Bacterial regulatory proteins, lacI family JV59_RS05505 PF00474 Sodium:solute symporter family JV59_RS05520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JV59_RS05520 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JV59_RS05530 PF03480 Bacterial extracellular solute-binding protein, family 7 JV59_RS05535 PF00356 Bacterial regulatory proteins, lacI family JV59_RS05540 PF03328 HpcH/HpaI aldolase/citrate lyase family JV59_RS05560 PF00561 alpha/beta hydrolase fold JV59_RS05585 PF03466 LysR substrate binding domain JV59_RS05585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS05630 PF03466 LysR substrate binding domain JV59_RS05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS05635 PF02581 Thiamine monophosphate synthase JV59_RS05640 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JV59_RS05650 PF01235 Sodium:alanine symporter family JV59_RS05680 PF03707 Bacterial signalling protein N terminal repeat JV59_RS05680 PF00563 EAL domain JV59_RS05680 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS05690 PF13495 Phage integrase, N-terminal SAM-like domain JV59_RS05690 PF00589 Phage integrase family JV59_RS05735 PF00881 Nitroreductase family JV59_RS05740 PF02264 LamB porin JV59_RS05760 PF13302 Acetyltransferase (GNAT) domain JV59_RS05760 PF00117 Glutamine amidotransferase class-I JV59_RS05760 PF00958 GMP synthase C terminal domain JV59_RS05760 PF13673 Acetyltransferase (GNAT) domain JV59_RS05760 PF03352 Methyladenine glycosylase JV59_RS05765 PF01327 Polypeptide deformylase JV59_RS05790 PF07690 Major Facilitator Superfamily JV59_RS05795 PF13533 Biotin-lipoyl like JV59_RS05800 PF03466 LysR substrate binding domain JV59_RS05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS05815 PF00677 Lumazine binding domain JV59_RS05820 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JV59_RS05850 PF00106 short chain dehydrogenase JV59_RS05860 PF03466 LysR substrate binding domain JV59_RS05860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS05870 PF02583 Metal-sensitive transcriptional repressor JV59_RS05880 PF01039 Carboxyl transferase domain JV59_RS05880 PF17848 Acetyl-coA carboxylase zinc finger domain JV59_RS05885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS05885 PF03466 LysR substrate binding domain JV59_RS05895 PF00251 Glycosyl hydrolases family 32 N-terminal domain JV59_RS05895 PF08244 Glycosyl hydrolases family 32 C terminal JV59_RS05900 PF00367 phosphotransferase system, EIIB JV59_RS05900 PF02378 Phosphotransferase system, EIIC JV59_RS05905 PF07702 UTRA domain JV59_RS05905 PF00392 Bacterial regulatory proteins, gntR family JV59_RS05910 PF01386 Ribosomal L25p family JV59_RS05915 PF00535 Glycosyl transferase family 2 JV59_RS05935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JV59_RS05940 PF00873 AcrB/AcrD/AcrF family JV59_RS05965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS05970 PF00072 Response regulator receiver domain JV59_RS05970 PF00486 Transcriptional regulatory protein, C terminal JV59_RS05980 PF00271 Helicase conserved C-terminal domain JV59_RS05980 PF04851 Type III restriction enzyme, res subunit JV59_RS05985 PF01479 S4 domain JV59_RS05985 PF00849 RNA pseudouridylate synthase JV59_RS05990 PF07690 Major Facilitator Superfamily JV59_RS06000 PF13460 NAD(P)H-binding JV59_RS06000 PF11066 Protein of unknown function (DUF2867) JV59_RS06005 PF01554 MatE JV59_RS06010 PF00005 ABC transporter JV59_RS06015 PF02687 FtsX-like permease family JV59_RS06015 PF12704 MacB-like periplasmic core domain JV59_RS06025 PF06965 Na+/H+ antiporter 1 JV59_RS06030 PF03422 Carbohydrate binding module (family 6) JV59_RS06030 PF02412 Thrombospondin type 3 repeat JV59_RS06045 PF00202 Aminotransferase class-III JV59_RS06050 PF16653 Saccharopine dehydrogenase C-terminal domain JV59_RS06050 PF03435 Saccharopine dehydrogenase NADP binding domain JV59_RS06055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JV59_RS06070 PF00994 Probable molybdopterin binding domain JV59_RS06080 PF00111 2Fe-2S iron-sulfur cluster binding domain JV59_RS06085 PF00268 Ribonucleotide reductase, small chain JV59_RS06100 PF00521 DNA gyrase/topoisomerase IV, subunit A JV59_RS06100 PF03989 DNA gyrase C-terminal domain, beta-propeller JV59_RS06105 PF00672 HAMP domain JV59_RS06105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS06110 PF11230 Protein of unknown function (DUF3029) JV59_RS06115 PF04055 Radical SAM superfamily JV59_RS06140 PF01259 SAICAR synthetase JV59_RS06155 PF00753 Metallo-beta-lactamase superfamily JV59_RS06160 PF00072 Response regulator receiver domain JV59_RS06160 PF00486 Transcriptional regulatory protein, C terminal JV59_RS06165 PF00672 HAMP domain JV59_RS06165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS06165 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS06165 PF16527 Two-component sensor protein CpxA, periplasmic domain JV59_RS06170 PF07715 TonB-dependent Receptor Plug Domain JV59_RS06170 PF00593 TonB dependent receptor JV59_RS06180 PF01618 MotA/TolQ/ExbB proton channel family JV59_RS06185 PF01618 MotA/TolQ/ExbB proton channel family JV59_RS06190 PF02472 Biopolymer transport protein ExbD/TolR JV59_RS06210 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JV59_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS06210 PF00989 PAS fold JV59_RS06210 PF17203 Single cache domain 3 JV59_RS06215 PF00072 Response regulator receiver domain JV59_RS06215 PF12431 Transcriptional regulator JV59_RS06235 PF08448 PAS fold JV59_RS06235 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS06240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS06240 PF00672 HAMP domain JV59_RS06240 PF12729 Four helix bundle sensory module for signal transduction JV59_RS06245 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS06245 PF18267 Rubredoxin NAD+ reductase C-terminal domain JV59_RS06245 PF04324 BFD-like [2Fe-2S] binding domain JV59_RS06245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JV59_RS06245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JV59_RS06250 PF13806 Rieske-like [2Fe-2S] domain JV59_RS06255 PF01226 Formate/nitrite transporter JV59_RS06260 PF10414 Sirohaem synthase dimerisation region JV59_RS06260 PF14824 Sirohaem biosynthesis protein central JV59_RS06260 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JV59_RS06275 PF00174 Oxidoreductase molybdopterin binding domain JV59_RS06280 PF01794 Ferric reductase like transmembrane component JV59_RS06290 PF01278 Omptin family JV59_RS06295 PF03466 LysR substrate binding domain JV59_RS06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS06310 PF01507 Phosphoadenosine phosphosulfate reductase family JV59_RS06310 PF11922 Domain of unknown function (DUF3440) JV59_RS06315 PF02195 ParB-like nuclease domain JV59_RS06325 PF03222 Tryptophan/tyrosine permease family JV59_RS06330 PF00072 Response regulator receiver domain JV59_RS06330 PF00486 Transcriptional regulatory protein, C terminal JV59_RS06335 PF00672 HAMP domain JV59_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS06335 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS06340 PF06629 MltA-interacting protein MipA JV59_RS06350 PF01212 Beta-eliminating lyase JV59_RS06355 PF07690 Major Facilitator Superfamily JV59_RS06360 PF03466 LysR substrate binding domain JV59_RS06360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS06375 PF13556 PucR C-terminal helix-turn-helix domain JV59_RS06375 PF17853 GGDEF-like domain JV59_RS06375 PF05651 Putative sugar diacid recognition JV59_RS06380 PF02595 Glycerate kinase family JV59_RS06385 PF01648 4'-phosphopantetheinyl transferase superfamily JV59_RS06385 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JV59_RS06390 PF00005 ABC transporter JV59_RS06395 PF01497 Periplasmic binding protein JV59_RS06400 PF01032 FecCD transport family JV59_RS06405 PF00005 ABC transporter JV59_RS06410 PF03621 MbtH-like protein JV59_RS06415 PF13193 AMP-binding enzyme C-terminal domain JV59_RS06415 PF00550 Phosphopantetheine attachment site JV59_RS06415 PF00668 Condensation domain JV59_RS06415 PF00501 AMP-binding enzyme JV59_RS06420 PF00550 Phosphopantetheine attachment site JV59_RS06420 PF00668 Condensation domain JV59_RS06420 PF00501 AMP-binding enzyme JV59_RS06420 PF13193 AMP-binding enzyme C-terminal domain JV59_RS06425 PF07715 TonB-dependent Receptor Plug Domain JV59_RS06425 PF00593 TonB dependent receptor JV59_RS06435 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) JV59_RS06460 PF02397 Bacterial sugar transferase JV59_RS06470 PF13439 Glycosyltransferase Family 4 JV59_RS06470 PF00534 Glycosyl transferases group 1 JV59_RS06505 PF00534 Glycosyl transferases group 1 JV59_RS06505 PF13439 Glycosyltransferase Family 4 JV59_RS06515 PF02954 Bacterial regulatory protein, Fis family JV59_RS06515 PF00072 Response regulator receiver domain JV59_RS06515 PF00158 Sigma-54 interaction domain JV59_RS06520 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS06520 PF00072 Response regulator receiver domain JV59_RS06520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS06520 PF17149 Periplasmic sensor domain found in signal transduction proteins JV59_RS06520 PF00672 HAMP domain JV59_RS06520 PF01627 Hpt domain JV59_RS06560 PF01554 MatE JV59_RS06565 PF00677 Lumazine binding domain JV59_RS06575 PF03881 Fructosamine kinase JV59_RS06585 PF00877 NlpC/P60 family JV59_RS06590 PF00672 HAMP domain JV59_RS06590 PF12729 Four helix bundle sensory module for signal transduction JV59_RS06590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS06600 PF03942 DTW domain JV59_RS06635 PF03453 MoeA N-terminal region (domain I and II) JV59_RS06635 PF00994 Probable molybdopterin binding domain JV59_RS06635 PF03454 MoeA C-terminal region (domain IV) JV59_RS06640 PF12804 MobA-like NTP transferase domain JV59_RS06645 PF00005 ABC transporter JV59_RS06645 PF08402 TOBE domain JV59_RS06650 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS06655 PF12849 PBP superfamily domain JV59_RS06660 PF00158 Sigma-54 interaction domain JV59_RS06660 PF00072 Response regulator receiver domain JV59_RS06660 PF02954 Bacterial regulatory protein, Fis family JV59_RS06665 PF00989 PAS fold JV59_RS06665 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS06680 PF08281 Sigma-70, region 4 JV59_RS06680 PF04542 Sigma-70 region 2 JV59_RS06690 PF12848 ABC transporter JV59_RS06690 PF00005 ABC transporter JV59_RS06715 PF00529 HlyD membrane-fusion protein of T1SS JV59_RS06715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JV59_RS06720 PF00873 AcrB/AcrD/AcrF family JV59_RS06725 PF00486 Transcriptional regulatory protein, C terminal JV59_RS06735 PF01645 Conserved region in glutamate synthase JV59_RS06755 PF03591 AzlC protein JV59_RS06760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS06760 PF03466 LysR substrate binding domain JV59_RS06770 PF03466 LysR substrate binding domain JV59_RS06770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS06775 PF01551 Peptidase family M23 JV59_RS06795 PF01292 Prokaryotic cytochrome b561 JV59_RS06800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS06800 PF00672 HAMP domain JV59_RS06800 PF02743 Cache domain JV59_RS06805 PF02634 FdhD/NarQ family JV59_RS06835 PF00384 Molybdopterin oxidoreductase JV59_RS06835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JV59_RS06835 PF01568 Molydopterin dinucleotide binding domain JV59_RS06840 PF13247 4Fe-4S dicluster domain JV59_RS06855 PF00909 Ammonium Transporter Family JV59_RS06860 PF02146 Sir2 family JV59_RS06865 PF17155 Gammaproteobacterial periplasmic sensor domain JV59_RS06865 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS06870 PF13416 Bacterial extracellular solute-binding protein JV59_RS06875 PF13416 Bacterial extracellular solute-binding protein JV59_RS06880 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS06885 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS06890 PF00005 ABC transporter JV59_RS06890 PF08402 TOBE domain JV59_RS06910 PF01171 PP-loop family JV59_RS06915 PF00582 Universal stress protein family JV59_RS06920 PF13545 Crp-like helix-turn-helix domain JV59_RS06920 PF00027 Cyclic nucleotide-binding domain JV59_RS06935 PF00403 Heavy-metal-associated domain JV59_RS06945 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JV59_RS06945 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JV59_RS06960 PF00115 Cytochrome C and Quinol oxidase polypeptide I JV59_RS06975 PF00813 FliP family JV59_RS06980 PF01313 Bacterial export proteins, family 3 JV59_RS06985 PF01311 Bacterial export proteins, family 1 JV59_RS06990 PF01312 FlhB HrpN YscU SpaS Family JV59_RS06995 PF00196 Bacterial regulatory proteins, luxR family JV59_RS06995 PF00072 Response regulator receiver domain JV59_RS07005 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS07005 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JV59_RS07005 PF00672 HAMP domain JV59_RS07005 PF01627 Hpt domain JV59_RS07005 PF00072 Response regulator receiver domain JV59_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS07015 PF00263 Bacterial type II and III secretion system protein JV59_RS07015 PF03958 Bacterial type II/III secretion system short domain JV59_RS07050 PF04888 Secretion system effector C (SseC) like family JV59_RS07085 PF00753 Metallo-beta-lactamase superfamily JV59_RS07100 PF02797 Chalcone and stilbene synthases, C-terminal domain JV59_RS07100 PF00195 Chalcone and stilbene synthases, N-terminal domain JV59_RS07115 PF12833 Helix-turn-helix domain JV59_RS07135 PF01514 Secretory protein of YscJ/FliF family JV59_RS07155 PF05932 Tir chaperone protein (CesT) family JV59_RS07170 PF00771 FHIPEP family JV59_RS07175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JV59_RS07175 PF02874 ATP synthase alpha/beta family, beta-barrel domain JV59_RS07175 PF18269 T3SS EscN ATPase C-terminal domain JV59_RS07210 PF07968 Leukocidin/Hemolysin toxin family JV59_RS07210 PF00652 Ricin-type beta-trefoil lectin domain JV59_RS07225 PF04030 D-arabinono-1,4-lactone oxidase JV59_RS07225 PF01565 FAD binding domain JV59_RS07235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS07235 PF00672 HAMP domain JV59_RS07235 PF12729 Four helix bundle sensory module for signal transduction JV59_RS07240 PF00842 Alanine racemase, C-terminal domain JV59_RS07240 PF01168 Alanine racemase, N-terminal domain JV59_RS07440 PF01810 LysE type translocator JV59_RS07460 PF17414 MatP C-terminal ribbon-helix-helix domain JV59_RS07460 PF06303 MatP N-terminal domain JV59_RS07465 PF13654 AAA domain JV59_RS07465 PF05362 Lon protease (S16) C-terminal proteolytic domain JV59_RS07470 PF07977 FabA-like domain JV59_RS07475 PF04957 Ribosome modulation factor JV59_RS07485 PF00005 ABC transporter JV59_RS07485 PF16326 ABC transporter C-terminal domain JV59_RS07485 PF12848 ABC transporter JV59_RS07500 PF07126 Cell-division protein ZapC JV59_RS07505 PF01180 Dihydroorotate dehydrogenase JV59_RS07510 PF05088 Bacterial NAD-glutamate dehydrogenase JV59_RS07520 PF11940 Domain of unknown function (DUF3458) Ig-like fold JV59_RS07520 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JV59_RS07520 PF01433 Peptidase family M1 domain JV59_RS07530 PF17804 Tail specific protease N-terminal domain JV59_RS07530 PF00595 PDZ domain JV59_RS07530 PF11818 C-terminal domain of tail specific protease (DUF3340) JV59_RS07530 PF03572 Peptidase family S41 JV59_RS07535 PF04352 ProQ/FINO family JV59_RS07535 PF17516 ProQ C-terminal domain JV59_RS07540 PF13185 GAF domain JV59_RS07545 PF00664 ABC transporter transmembrane region JV59_RS07545 PF00005 ABC transporter JV59_RS07550 PF04403 Paraquat-inducible protein A JV59_RS07555 PF02470 MlaD protein JV59_RS07560 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JV59_RS07560 PF01189 16S rRNA methyltransferase RsmB/F JV59_RS07560 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JV59_RS07580 PF00391 PEP-utilising enzyme, mobile domain JV59_RS07580 PF02896 PEP-utilising enzyme, TIM barrel domain JV59_RS07580 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JV59_RS07585 PF00793 DAHP synthetase I family JV59_RS07590 PF04461 Protein of unknown function (DUF520) JV59_RS07595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JV59_RS07595 PF14824 Sirohaem biosynthesis protein central JV59_RS07595 PF10414 Sirohaem synthase dimerisation region JV59_RS07600 PF00497 Bacterial extracellular solute-binding proteins, family 3 JV59_RS07605 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS07610 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS07615 PF00005 ABC transporter JV59_RS07620 PF01027 Inhibitor of apoptosis-promoting Bax1 JV59_RS07625 PF04358 DsrC like protein JV59_RS07630 PF00708 Acylphosphatase JV59_RS07635 PF00672 HAMP domain JV59_RS07635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS07635 PF12729 Four helix bundle sensory module for signal transduction JV59_RS07640 PF17785 PUA-like domain JV59_RS07640 PF10672 S-adenosylmethionine-dependent methyltransferase JV59_RS07655 PF05736 OprF membrane domain JV59_RS07655 PF00691 OmpA family JV59_RS07665 PF06508 Queuosine biosynthesis protein QueC JV59_RS07670 PF04055 Radical SAM superfamily JV59_RS07690 PF13193 AMP-binding enzyme C-terminal domain JV59_RS07690 PF16177 Acetyl-coenzyme A synthetase N-terminus JV59_RS07690 PF00501 AMP-binding enzyme JV59_RS07695 PF04303 PrpF protein JV59_RS07700 PF00330 Aconitase family (aconitate hydratase) JV59_RS07700 PF00694 Aconitase C-terminal domain JV59_RS07705 PF00285 Citrate synthase, C-terminal domain JV59_RS07725 PF04717 Type VI secretion system, phage-baseplate injector JV59_RS07725 PF06715 Gp5 C-terminal repeat (3 copies) JV59_RS07755 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JV59_RS07780 PF07724 AAA domain (Cdc48 subfamily) JV59_RS07780 PF17871 AAA lid domain JV59_RS07780 PF10431 C-terminal, D2-small domain, of ClpB protein JV59_RS07780 PF00004 ATPase family associated with various cellular activities (AAA) JV59_RS07810 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JV59_RS07825 PF00069 Protein kinase domain JV59_RS07845 PF01970 Tripartite tricarboxylate transporter TctA family JV59_RS07855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JV59_RS07870 PF12792 CSS motif domain associated with EAL JV59_RS07870 PF00563 EAL domain JV59_RS07885 PF04204 Homoserine O-succinyltransferase JV59_RS07890 PF00561 alpha/beta hydrolase fold JV59_RS07890 PF00364 Biotin-requiring enzyme JV59_RS07905 PF05971 RNA methyltransferase JV59_RS07910 PF01863 Protein of unknown function DUF45 JV59_RS07920 PF00072 Response regulator receiver domain JV59_RS07920 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS07920 PF09308 LuxQ, periplasmic JV59_RS07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS07930 PF00005 ABC transporter JV59_RS07935 PF03466 LysR substrate binding domain JV59_RS07935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS07940 PF07690 Major Facilitator Superfamily JV59_RS07950 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS07965 PF00005 ABC transporter JV59_RS07970 PF01032 FecCD transport family JV59_RS07975 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JV59_RS07985 PF00300 Histidine phosphatase superfamily (branch 1) JV59_RS07990 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JV59_RS07995 PF02654 Cobalamin-5-phosphate synthase JV59_RS08000 PF02277 Phosphoribosyltransferase JV59_RS08005 PF01613 Flavin reductase like domain JV59_RS08010 PF13460 NAD(P)H-binding JV59_RS08015 PF00375 Sodium:dicarboxylate symporter family JV59_RS08140 PF00574 Clp protease JV59_RS08190 PF02463 RecF/RecN/SMC N terminal domain JV59_RS08220 PF00717 Peptidase S24-like JV59_RS08220 PF01381 Helix-turn-helix JV59_RS08265 PF14659 Phage integrase, N-terminal SAM-like domain JV59_RS08265 PF00589 Phage integrase family JV59_RS08265 PF13356 Arm DNA-binding domain JV59_RS08270 PF00929 Exonuclease JV59_RS08270 PF08411 Exonuclease C-terminal JV59_RS08275 PF03788 LrgA family JV59_RS08280 PF04172 LrgB-like family JV59_RS08285 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JV59_RS08285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JV59_RS08290 PF11871 Domain of unknown function (DUF3391) JV59_RS08290 PF01966 HD domain JV59_RS08295 PF02222 ATP-grasp domain JV59_RS08320 PF05724 Thiopurine S-methyltransferase (TPMT) JV59_RS08340 PF07070 SpoOM protein JV59_RS08345 PF07702 UTRA domain JV59_RS08345 PF00392 Bacterial regulatory proteins, gntR family JV59_RS08350 PF01979 Amidohydrolase family JV59_RS08355 PF00491 Arginase family JV59_RS08360 PF01175 Urocanase Rossmann-like domain JV59_RS08360 PF17391 Urocanase N-terminal domain JV59_RS08360 PF17392 Urocanase C-terminal domain JV59_RS08365 PF00221 Aromatic amino acid lyase JV59_RS08375 PF04191 Phospholipid methyltransferase JV59_RS08395 PF13488 Glycine zipper JV59_RS08395 PF00691 OmpA family JV59_RS08410 PF02798 Glutathione S-transferase, N-terminal domain JV59_RS08410 PF14497 Glutathione S-transferase, C-terminal domain JV59_RS08420 PF04209 homogentisate 1,2-dioxygenase JV59_RS08425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JV59_RS08430 PF07687 Peptidase dimerisation domain JV59_RS08430 PF01546 Peptidase family M20/M25/M40 JV59_RS08445 PF13419 Haloacid dehalogenase-like hydrolase JV59_RS08450 PF00132 Bacterial transferase hexapeptide (six repeats) JV59_RS08450 PF14602 Hexapeptide repeat of succinyl-transferase JV59_RS08450 PF12804 MobA-like NTP transferase domain JV59_RS08465 PF00583 Acetyltransferase (GNAT) family JV59_RS08495 PF13673 Acetyltransferase (GNAT) domain JV59_RS08550 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JV59_RS08565 PF08212 Lipocalin-like domain JV59_RS08585 PF00583 Acetyltransferase (GNAT) family JV59_RS08600 PF03831 PhnA domain JV59_RS08600 PF08274 PhnA Zinc-Ribbon JV59_RS08615 PF00583 Acetyltransferase (GNAT) family JV59_RS08620 PF01925 Sulfite exporter TauE/SafE JV59_RS08630 PF01717 Cobalamin-independent synthase, Catalytic domain JV59_RS08630 PF08267 Cobalamin-independent synthase, N-terminal domain JV59_RS08645 PF09905 DNA-binding protein VF530 JV59_RS08650 PF13419 Haloacid dehalogenase-like hydrolase JV59_RS08725 PF00892 EamA-like transporter family JV59_RS08740 PF00210 Ferritin-like domain JV59_RS08745 PF01734 Patatin-like phospholipase JV59_RS08750 PF00672 HAMP domain JV59_RS08750 PF02743 Cache domain JV59_RS08750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS08760 PF00196 Bacterial regulatory proteins, luxR family JV59_RS08760 PF00072 Response regulator receiver domain JV59_RS08765 PF17200 Single Cache domain 2 JV59_RS08765 PF07730 Histidine kinase JV59_RS08770 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JV59_RS08780 PF03480 Bacterial extracellular solute-binding protein, family 7 JV59_RS08795 PF00753 Metallo-beta-lactamase superfamily JV59_RS08800 PF05951 Bacterial protein of unknown function (DUF882) JV59_RS08805 PF03734 L,D-transpeptidase catalytic domain JV59_RS08805 PF01471 Putative peptidoglycan binding domain JV59_RS08830 PF00925 GTP cyclohydrolase II JV59_RS08840 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS08860 PF13302 Acetyltransferase (GNAT) domain JV59_RS08865 PF18024 Helix-turn-helix domain JV59_RS08865 PF00158 Sigma-54 interaction domain JV59_RS08870 PF05128 Domain of unknown function (DUF697) JV59_RS08875 PF04317 YcjX-like family, DUF463 JV59_RS08890 PF00425 chorismate binding enzyme JV59_RS08890 PF04715 Anthranilate synthase component I, N terminal region JV59_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS08895 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS08895 PF09308 LuxQ, periplasmic JV59_RS08895 PF00072 Response regulator receiver domain JV59_RS08905 PF00293 NUDIX domain JV59_RS08910 PF03222 Tryptophan/tyrosine permease family JV59_RS08915 PF03315 Serine dehydratase beta chain JV59_RS08915 PF03313 Serine dehydratase alpha chain JV59_RS08920 PF03707 Bacterial signalling protein N terminal repeat JV59_RS08920 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS08920 PF00563 EAL domain JV59_RS08925 PF03222 Tryptophan/tyrosine permease family JV59_RS08935 PF00672 HAMP domain JV59_RS08935 PF12729 Four helix bundle sensory module for signal transduction JV59_RS08935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS08940 PF00152 tRNA synthetases class II (D, K and N) JV59_RS08940 PF01336 OB-fold nucleic acid binding domain JV59_RS08950 PF00155 Aminotransferase class I and II JV59_RS08950 PF00392 Bacterial regulatory proteins, gntR family JV59_RS08960 PF01966 HD domain JV59_RS08960 PF00672 HAMP domain JV59_RS08965 PF00155 Aminotransferase class I and II JV59_RS08980 PF00270 DEAD/DEAH box helicase JV59_RS08980 PF11898 Domain of unknown function (DUF3418) JV59_RS08980 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JV59_RS08980 PF04408 Helicase associated domain (HA2) JV59_RS08980 PF00271 Helicase conserved C-terminal domain JV59_RS08985 PF00390 Malic enzyme, N-terminal domain JV59_RS08985 PF03949 Malic enzyme, NAD binding domain JV59_RS08995 PF02698 DUF218 domain JV59_RS09005 PF05193 Peptidase M16 inactive domain JV59_RS09005 PF00675 Insulinase (Peptidase family M16) JV59_RS09020 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JV59_RS09025 PF00266 Aminotransferase class-V JV59_RS09035 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS09040 PF00664 ABC transporter transmembrane region JV59_RS09040 PF00005 ABC transporter JV59_RS09045 PF00664 ABC transporter transmembrane region JV59_RS09045 PF00005 ABC transporter JV59_RS09050 PF07690 Major Facilitator Superfamily JV59_RS09055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS09055 PF03466 LysR substrate binding domain JV59_RS09060 PF02567 Phenazine biosynthesis-like protein JV59_RS09065 PF00849 RNA pseudouridylate synthase JV59_RS09065 PF01479 S4 domain JV59_RS09070 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS09070 PF03707 Bacterial signalling protein N terminal repeat JV59_RS09070 PF00563 EAL domain JV59_RS09080 PF01300 Telomere recombination JV59_RS09085 PF02811 PHP domain JV59_RS09090 PF08056 Tryptophan operon leader peptide JV59_RS09095 PF00425 chorismate binding enzyme JV59_RS09095 PF04715 Anthranilate synthase component I, N terminal region JV59_RS09100 PF00117 Glutamine amidotransferase class-I JV59_RS09105 PF00591 Glycosyl transferase family, a/b domain JV59_RS09105 PF02885 Glycosyl transferase family, helical bundle domain JV59_RS09110 PF00218 Indole-3-glycerol phosphate synthase JV59_RS09110 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JV59_RS09115 PF00291 Pyridoxal-phosphate dependent enzyme JV59_RS09120 PF00290 Tryptophan synthase alpha chain JV59_RS09125 PF00375 Sodium:dicarboxylate symporter family JV59_RS09150 PF06689 ClpX C4-type zinc finger JV59_RS09150 PF07724 AAA domain (Cdc48 subfamily) JV59_RS09150 PF10431 C-terminal, D2-small domain, of ClpB protein JV59_RS09240 PF02954 Bacterial regulatory protein, Fis family JV59_RS09240 PF13185 GAF domain JV59_RS09240 PF00158 Sigma-54 interaction domain JV59_RS09255 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JV59_RS09255 PF00271 Helicase conserved C-terminal domain JV59_RS09255 PF04408 Helicase associated domain (HA2) JV59_RS09255 PF11898 Domain of unknown function (DUF3418) JV59_RS09255 PF00270 DEAD/DEAH box helicase JV59_RS09295 PF00012 Hsp70 protein JV59_RS09300 PF00012 Hsp70 protein JV59_RS09310 PF03150 Di-haem cytochrome c peroxidase JV59_RS09310 PF00034 Cytochrome c JV59_RS09335 PF12833 Helix-turn-helix domain JV59_RS09335 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JV59_RS09345 PF04116 Fatty acid hydroxylase superfamily JV59_RS09355 PF05656 Protein of unknown function (DUF805) JV59_RS09370 PF02627 Carboxymuconolactone decarboxylase family JV59_RS09375 PF02743 Cache domain JV59_RS09375 PF00672 HAMP domain JV59_RS09375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS09395 PF01323 DSBA-like thioredoxin domain JV59_RS09400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JV59_RS09400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JV59_RS09410 PF03466 LysR substrate binding domain JV59_RS09410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS09420 PF01047 MarR family JV59_RS09425 PF02566 OsmC-like protein JV59_RS09430 PF08267 Cobalamin-independent synthase, N-terminal domain JV59_RS09430 PF01717 Cobalamin-independent synthase, Catalytic domain JV59_RS09435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS09435 PF03466 LysR substrate binding domain JV59_RS09450 PF00563 EAL domain JV59_RS09450 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS09450 PF03707 Bacterial signalling protein N terminal repeat JV59_RS09455 PF08497 Radical SAM N-terminal JV59_RS09455 PF11842 Domain of unknown function (DUF3362) JV59_RS09455 PF04055 Radical SAM superfamily JV59_RS09460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS09460 PF12729 Four helix bundle sensory module for signal transduction JV59_RS09460 PF00672 HAMP domain JV59_RS09465 PF00266 Aminotransferase class-V JV59_RS09475 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS09475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS09475 PF00497 Bacterial extracellular solute-binding proteins, family 3 JV59_RS09490 PF04994 TfoX C-terminal domain JV59_RS09490 PF04993 TfoX N-terminal domain JV59_RS09500 PF03956 Lysine exporter LysO JV59_RS09510 PF00282 Pyridoxal-dependent decarboxylase conserved domain JV59_RS09515 PF01380 SIS domain JV59_RS09515 PF01418 Helix-turn-helix domain, rpiR family JV59_RS09520 PF00465 Iron-containing alcohol dehydrogenase JV59_RS09520 PF00171 Aldehyde dehydrogenase family JV59_RS09550 PF10549 ORF11CD3 domain JV59_RS09550 PF09669 Phage regulatory protein Rha (Phage_pRha) JV59_RS09600 PF00589 Phage integrase family JV59_RS09600 PF13495 Phage integrase, N-terminal SAM-like domain JV59_RS09605 PF00462 Glutaredoxin JV59_RS09610 PF02080 TrkA-C domain JV59_RS09610 PF06826 Predicted Permease Membrane Region JV59_RS09615 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS09620 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS09625 PF00497 Bacterial extracellular solute-binding proteins, family 3 JV59_RS09630 PF00005 ABC transporter JV59_RS09640 PF02901 Pyruvate formate lyase-like JV59_RS09640 PF01228 Glycine radical JV59_RS09650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS09650 PF00672 HAMP domain JV59_RS09655 PF04055 Radical SAM superfamily JV59_RS09665 PF03887 YfbU domain JV59_RS09670 PF06629 MltA-interacting protein MipA JV59_RS09675 PF06798 PrkA serine protein kinase C-terminal domain JV59_RS09675 PF08298 PrkA AAA domain JV59_RS09680 PF04285 Protein of unknown function (DUF444) JV59_RS09685 PF04293 SpoVR like protein JV59_RS09690 PF02348 Cytidylyltransferase JV59_RS09695 PF03966 Trm112p-like protein JV59_RS09700 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JV59_RS09705 PF00664 ABC transporter transmembrane region JV59_RS09705 PF00005 ABC transporter JV59_RS09710 PF03772 Competence protein JV59_RS09710 PF00753 Metallo-beta-lactamase superfamily JV59_RS09720 PF02687 FtsX-like permease family JV59_RS09720 PF12704 MacB-like periplasmic core domain JV59_RS09725 PF00005 ABC transporter JV59_RS09730 PF02687 FtsX-like permease family JV59_RS09730 PF12704 MacB-like periplasmic core domain JV59_RS09740 PF02559 CarD-like/TRCF domain JV59_RS09740 PF00270 DEAD/DEAH box helicase JV59_RS09740 PF00271 Helicase conserved C-terminal domain JV59_RS09740 PF17757 UvrB interaction domain JV59_RS09740 PF03461 TRCF domain JV59_RS09760 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS09765 PF05728 Uncharacterised protein family (UPF0227) JV59_RS09775 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JV59_RS09775 PF13036 Peptidoglycan-synthase activator LpoB JV59_RS09790 PF01230 HIT domain JV59_RS09795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS09795 PF00672 HAMP domain JV59_RS09805 PF00392 Bacterial regulatory proteins, gntR family JV59_RS09805 PF07840 FadR C-terminal domain JV59_RS09810 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JV59_RS09815 PF02600 Disulfide bond formation protein DsbB JV59_RS09820 PF01580 FtsK/SpoIIIE family JV59_RS09820 PF09397 Ftsk gamma domain JV59_RS09820 PF17854 FtsK alpha domain JV59_RS09820 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JV59_RS09825 PF01037 Lrp/AsnC ligand binding domain JV59_RS09830 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JV59_RS09830 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JV59_RS09835 PF04217 Protein of unknown function, DUF412 JV59_RS09840 PF00871 Acetokinase family JV59_RS09845 PF07085 DRTGG domain JV59_RS09845 PF01515 Phosphate acetyl/butaryl transferase JV59_RS09850 PF17151 Periplasmic sensor domain JV59_RS09850 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS09855 PF13409 Glutathione S-transferase, N-terminal domain JV59_RS09860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JV59_RS09860 PF00005 ABC transporter JV59_RS09865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JV59_RS09865 PF00005 ABC transporter JV59_RS09870 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS09870 PF12911 N-terminal TM domain of oligopeptide transport permease C JV59_RS09875 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS09880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JV59_RS09895 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS09895 PF17158 Membrane-associated sensor, integral membrane domain JV59_RS09910 PF02743 Cache domain JV59_RS09910 PF00672 HAMP domain JV59_RS09910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS09915 PF04151 Bacterial pre-peptidase C-terminal domain JV59_RS09915 PF04389 Peptidase family M28 JV59_RS09920 PF00082 Subtilase family JV59_RS09920 PF04151 Bacterial pre-peptidase C-terminal domain JV59_RS09920 PF05922 Peptidase inhibitor I9 JV59_RS09925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS09925 PF00672 HAMP domain JV59_RS09925 PF02743 Cache domain JV59_RS09935 PF01145 SPFH domain / Band 7 family JV59_RS09935 PF16200 C-terminal region of band_7 JV59_RS09955 PF00005 ABC transporter JV59_RS09955 PF12704 MacB-like periplasmic core domain JV59_RS09955 PF02687 FtsX-like permease family JV59_RS09960 PF12704 MacB-like periplasmic core domain JV59_RS09960 PF02687 FtsX-like permease family JV59_RS09960 PF00005 ABC transporter JV59_RS09965 PF12704 MacB-like periplasmic core domain JV59_RS09965 PF02687 FtsX-like permease family JV59_RS09975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JV59_RS09985 PF02868 Thermolysin metallopeptidase, alpha-helical domain JV59_RS09985 PF01447 Thermolysin metallopeptidase, catalytic domain JV59_RS09985 PF04151 Bacterial pre-peptidase C-terminal domain JV59_RS09985 PF03413 Peptidase propeptide and YPEB domain JV59_RS09985 PF07504 Fungalysin/Thermolysin Propeptide Motif JV59_RS09995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JV59_RS09995 PF00326 Prolyl oligopeptidase family JV59_RS10000 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JV59_RS10000 PF18416 N-acetylglucosamine binding protein domain 2 JV59_RS10015 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JV59_RS10015 PF13632 Glycosyl transferase family group 2 JV59_RS10020 PF02350 UDP-N-acetylglucosamine 2-epimerase JV59_RS10025 PF07075 Protein of unknown function (DUF1343) JV59_RS10030 PF00933 Glycosyl hydrolase family 3 N terminal domain JV59_RS10030 PF01915 Glycosyl hydrolase family 3 C-terminal domain JV59_RS10045 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JV59_RS10045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JV59_RS10050 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JV59_RS10055 PF03480 Bacterial extracellular solute-binding protein, family 7 JV59_RS10060 PF01266 FAD dependent oxidoreductase JV59_RS10075 PF03601 Conserved hypothetical protein 698 JV59_RS10080 PF00205 Thiamine pyrophosphate enzyme, central domain JV59_RS10080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JV59_RS10080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JV59_RS10085 PF08406 CbbQ/NirQ/NorQ C-terminal JV59_RS10085 PF07728 AAA domain (dynein-related subfamily) JV59_RS10085 PF12556 Cobaltochelatase CobS subunit N terminal JV59_RS10090 PF06213 Cobalamin biosynthesis protein CobT JV59_RS10090 PF11775 Cobalamin biosynthesis protein CobT VWA domain JV59_RS10095 PF01925 Sulfite exporter TauE/SafE JV59_RS10100 PF01515 Phosphate acetyl/butaryl transferase JV59_RS10105 PF09339 IclR helix-turn-helix domain JV59_RS10105 PF01614 Bacterial transcriptional regulator JV59_RS10135 PF05230 MASE2 domain JV59_RS10135 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS10145 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JV59_RS10150 PF09619 Type III secretion system lipoprotein chaperone (YscW) JV59_RS10170 PF01037 Lrp/AsnC ligand binding domain JV59_RS10170 PF13404 AsnC-type helix-turn-helix domain JV59_RS10175 PF00291 Pyridoxal-phosphate dependent enzyme JV59_RS10195 PF07690 Major Facilitator Superfamily JV59_RS10200 PF03601 Conserved hypothetical protein 698 JV59_RS10205 PF00501 AMP-binding enzyme JV59_RS10205 PF13193 AMP-binding enzyme C-terminal domain JV59_RS10210 PF13378 Enolase C-terminal domain-like JV59_RS10215 PF00378 Enoyl-CoA hydratase/isomerase JV59_RS10220 PF12697 Alpha/beta hydrolase family JV59_RS10225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JV59_RS10225 PF16582 Middle domain of thiamine pyrophosphate JV59_RS10225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JV59_RS10230 PF00425 chorismate binding enzyme JV59_RS10235 PF00155 Aminotransferase class I and II JV59_RS10245 PF00704 Glycosyl hydrolases family 18 JV59_RS10255 PF01966 HD domain JV59_RS10255 PF13286 Phosphohydrolase-associated domain JV59_RS10260 PF00962 Adenosine/AMP deaminase JV59_RS10275 PF00270 DEAD/DEAH box helicase JV59_RS10275 PF00271 Helicase conserved C-terminal domain JV59_RS10280 PF08496 Peptidase family S49 N-terminal JV59_RS10280 PF01343 Peptidase family S49 JV59_RS10285 PF00106 short chain dehydrogenase JV59_RS10300 PF07733 Bacterial DNA polymerase III alpha NTPase domain JV59_RS10300 PF14579 Helix-hairpin-helix motif JV59_RS10300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JV59_RS10300 PF02811 PHP domain JV59_RS10300 PF01336 OB-fold nucleic acid binding domain JV59_RS10305 PF00072 Response regulator receiver domain JV59_RS10305 PF01584 CheW-like domain JV59_RS10310 PF00480 ROK family JV59_RS10315 PF02887 Pyruvate kinase, alpha/beta domain JV59_RS10315 PF00224 Pyruvate kinase, barrel domain JV59_RS10320 PF01734 Patatin-like phospholipase JV59_RS10335 PF00209 Sodium:neurotransmitter symporter family JV59_RS10345 PF00367 phosphotransferase system, EIIB JV59_RS10345 PF02378 Phosphotransferase system, EIIC JV59_RS10350 PF01026 TatD related DNase JV59_RS10355 PF09115 DNA polymerase III, delta subunit, C terminal JV59_RS10360 PF02223 Thymidylate kinase JV59_RS10365 PF02618 YceG-like family JV59_RS10370 PF01063 Amino-transferase class IV JV59_RS10375 PF02801 Beta-ketoacyl synthase, C-terminal domain JV59_RS10375 PF00109 Beta-ketoacyl synthase, N-terminal domain JV59_RS10380 PF00550 Phosphopantetheine attachment site JV59_RS10390 PF00698 Acyl transferase domain JV59_RS10395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JV59_RS10395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JV59_RS10400 PF02504 Fatty acid synthesis protein JV59_RS10405 PF01783 Ribosomal L32p protein family JV59_RS10410 PF02620 Large ribosomal RNA subunit accumulation protein YceD JV59_RS10415 PF02545 Maf-like protein JV59_RS10420 PF01479 S4 domain JV59_RS10420 PF00849 RNA pseudouridylate synthase JV59_RS10425 PF00575 S1 RNA binding domain JV59_RS10425 PF12111 Polyribonucleotide phosphorylase C terminal JV59_RS10425 PF10150 Ribonuclease E/G family JV59_RS10430 PF01740 STAS domain JV59_RS10430 PF00916 Sulfate permease family JV59_RS10435 PF01612 3'-5' exonuclease JV59_RS10435 PF00570 HRDC domain JV59_RS10440 PF13193 AMP-binding enzyme C-terminal domain JV59_RS10440 PF00501 AMP-binding enzyme JV59_RS10445 PF00561 alpha/beta hydrolase fold JV59_RS10460 PF00814 Glycoprotease family JV59_RS10465 PF04851 Type III restriction enzyme, res subunit JV59_RS10465 PF13307 Helicase C-terminal domain JV59_RS10475 PF01842 ACT domain JV59_RS10475 PF00551 Formyl transferase JV59_RS10480 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JV59_RS10480 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS10485 PF01343 Peptidase family S49 JV59_RS10490 PF00710 Asparaginase, N-terminal JV59_RS10490 PF17763 Glutaminase/Asparaginase C-terminal domain JV59_RS10500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JV59_RS10500 PF02403 Seryl-tRNA synthetase N-terminal domain JV59_RS10505 PF12002 MgsA AAA+ ATPase C terminal JV59_RS10505 PF16193 AAA C-terminal domain JV59_RS10505 PF00004 ATPase family associated with various cellular activities (AAA) JV59_RS10510 PF03548 Outer membrane lipoprotein carrier protein LolA JV59_RS10515 PF07516 SecA Wing and Scaffold domain JV59_RS10515 PF01043 SecA preprotein cross-linking domain JV59_RS10515 PF07517 SecA DEAD-like domain JV59_RS10515 PF02810 SEC-C motif JV59_RS10525 PF01207 Dihydrouridine synthase (Dus) JV59_RS10530 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS10530 PF05230 MASE2 domain JV59_RS10535 PF00005 ABC transporter JV59_RS10540 PF02653 Branched-chain amino acid transport system / permease component JV59_RS10555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS10555 PF03466 LysR substrate binding domain JV59_RS10565 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JV59_RS10575 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JV59_RS10580 PF18073 Rubredoxin metal binding domain JV59_RS10585 PF06305 Lipopolysaccharide assembly protein A domain JV59_RS10590 PF00216 Bacterial DNA-binding protein JV59_RS10595 PF00575 S1 RNA binding domain JV59_RS10600 PF02224 Cytidylate kinase JV59_RS10610 PF13145 PPIC-type PPIASE domain JV59_RS10615 PF00216 Bacterial DNA-binding protein JV59_RS10620 PF00004 ATPase family associated with various cellular activities (AAA) JV59_RS10620 PF05362 Lon protease (S16) C-terminal proteolytic domain JV59_RS10620 PF02190 ATP-dependent protease La (LON) substrate-binding domain JV59_RS10625 PF06689 ClpX C4-type zinc finger JV59_RS10625 PF10431 C-terminal, D2-small domain, of ClpB protein JV59_RS10625 PF07724 AAA domain (Cdc48 subfamily) JV59_RS10630 PF00574 Clp protease JV59_RS10635 PF05698 Bacterial trigger factor protein (TF) C-terminus JV59_RS10635 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JV59_RS10635 PF05697 Bacterial trigger factor protein (TF) JV59_RS10640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS10640 PF02743 Cache domain JV59_RS10640 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS10645 PF00158 Sigma-54 interaction domain JV59_RS10645 PF02954 Bacterial regulatory protein, Fis family JV59_RS10645 PF00072 Response regulator receiver domain JV59_RS10655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JV59_RS10660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JV59_RS10665 PF03480 Bacterial extracellular solute-binding protein, family 7 JV59_RS10670 PF17912 MalK OB fold domain JV59_RS10670 PF03459 TOBE domain JV59_RS10670 PF00005 ABC transporter JV59_RS10675 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS10680 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS10685 PF01547 Bacterial extracellular solute-binding protein JV59_RS10690 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS10690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS10690 PF00672 HAMP domain JV59_RS10695 PF00486 Transcriptional regulatory protein, C terminal JV59_RS10695 PF00072 Response regulator receiver domain JV59_RS10700 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JV59_RS10715 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JV59_RS10715 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JV59_RS10720 PF02132 RecR protein JV59_RS10720 PF13662 Toprim domain JV59_RS10725 PF02575 YbaB/EbfC DNA-binding family JV59_RS10730 PF12170 DNA polymerase III tau subunit V interacting with alpha JV59_RS10730 PF12169 DNA polymerase III subunits gamma and tau domain III JV59_RS10730 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JV59_RS10735 PF00156 Phosphoribosyl transferase domain JV59_RS10740 PF04304 Protein of unknown function (DUF454) JV59_RS10750 PF00072 Response regulator receiver domain JV59_RS10755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS10755 PF03466 LysR substrate binding domain JV59_RS10760 PF00881 Nitroreductase family JV59_RS10765 PF00378 Enoyl-CoA hydratase/isomerase JV59_RS10765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JV59_RS10765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JV59_RS10770 PF00108 Thiolase, N-terminal domain JV59_RS10770 PF02803 Thiolase, C-terminal domain JV59_RS10775 PF08281 Sigma-70, region 4 JV59_RS10775 PF04542 Sigma-70 region 2 JV59_RS10785 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JV59_RS10790 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JV59_RS10795 PF04333 MlaA lipoprotein JV59_RS10800 PF03918 Cytochrome C biogenesis protein JV59_RS10805 PF03918 Cytochrome C biogenesis protein JV59_RS10810 PF08534 Redoxin JV59_RS10815 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JV59_RS10815 PF01578 Cytochrome C assembly protein JV59_RS10820 PF03100 CcmE JV59_RS10825 PF04995 Heme exporter protein D (CcmD) JV59_RS10830 PF01578 Cytochrome C assembly protein JV59_RS10835 PF03379 CcmB protein JV59_RS10840 PF00005 ABC transporter JV59_RS10850 PF01584 CheW-like domain JV59_RS10860 PF13614 AAA domain JV59_RS10865 PF00072 Response regulator receiver domain JV59_RS10865 PF01339 CheB methylesterase JV59_RS10870 PF01627 Hpt domain JV59_RS10870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS10870 PF02895 Signal transducing histidine kinase, homodimeric domain JV59_RS10870 PF00072 Response regulator receiver domain JV59_RS10870 PF01584 CheW-like domain JV59_RS10875 PF04344 Chemotaxis phosphatase, CheZ JV59_RS10880 PF00072 Response regulator receiver domain JV59_RS10885 PF04542 Sigma-70 region 2 JV59_RS10885 PF04545 Sigma-70, region 4 JV59_RS10885 PF04539 Sigma-70 region 3 JV59_RS10890 PF10609 NUBPL iron-transfer P-loop NTPase JV59_RS10895 PF00448 SRP54-type protein, GTPase domain JV59_RS10900 PF00771 FHIPEP family JV59_RS10905 PF00300 Histidine phosphatase superfamily (branch 1) JV59_RS10910 PF00675 Insulinase (Peptidase family M16) JV59_RS10910 PF05193 Peptidase M16 inactive domain JV59_RS10915 PF06185 YecM protein JV59_RS10920 PF05746 DALR anticodon binding domain JV59_RS10920 PF00750 tRNA synthetases class I (R) JV59_RS10920 PF03485 Arginyl tRNA synthetase N terminal domain JV59_RS10935 PF02421 Ferrous iron transport protein B JV59_RS10935 PF07664 Ferrous iron transport protein B C terminus JV59_RS10935 PF07670 Nucleoside recognition JV59_RS10940 PF04023 FeoA domain JV59_RS10945 PF12833 Helix-turn-helix domain JV59_RS10945 PF02311 AraC-like ligand binding domain JV59_RS10950 PF01297 Zinc-uptake complex component A periplasmic JV59_RS10955 PF00005 ABC transporter JV59_RS10960 PF00950 ABC 3 transport family JV59_RS10965 PF00156 Phosphoribosyl transferase domain JV59_RS10970 PF02674 Colicin V production protein JV59_RS10975 PF05036 Sporulation related domain JV59_RS10980 PF02875 Mur ligase family, glutamate ligase domain JV59_RS10980 PF08245 Mur ligase middle domain JV59_RS10985 PF01039 Carboxyl transferase domain JV59_RS10985 PF17848 Acetyl-coA carboxylase zinc finger domain JV59_RS10990 PF01416 tRNA pseudouridine synthase JV59_RS11000 PF02774 Semialdehyde dehydrogenase, dimerisation domain JV59_RS11000 PF01118 Semialdehyde dehydrogenase, NAD binding domain JV59_RS11005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JV59_RS11005 PF11890 Domain of unknown function (DUF3410) JV59_RS11005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JV59_RS11010 PF02801 Beta-ketoacyl synthase, C-terminal domain JV59_RS11010 PF00109 Beta-ketoacyl synthase, N-terminal domain JV59_RS11020 PF03358 NADPH-dependent FMN reductase JV59_RS11025 PF08891 YfcL protein JV59_RS11040 PF04315 Elongation factor P hydroxylase JV59_RS11045 PF03458 UPF0126 domain JV59_RS11055 PF01264 Chorismate synthase JV59_RS11060 PF05175 Methyltransferase small domain JV59_RS11065 PF01713 Smr domain JV59_RS11070 PF01312 FlhB HrpN YscU SpaS Family JV59_RS11075 PF01311 Bacterial export proteins, family 1 JV59_RS11080 PF01313 Bacterial export proteins, family 3 JV59_RS11085 PF00813 FliP family JV59_RS11090 PF04347 Flagellar biosynthesis protein, FliO JV59_RS11095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JV59_RS11100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JV59_RS11100 PF02154 Flagellar motor switch protein FliM JV59_RS11120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JV59_RS11120 PF18269 T3SS EscN ATPase C-terminal domain JV59_RS11130 PF01706 FliG C-terminal domain JV59_RS11130 PF14841 FliG middle domain JV59_RS11130 PF14842 FliG N-terminal domain JV59_RS11135 PF01514 Secretory protein of YscJ/FliF family JV59_RS11135 PF08345 Flagellar M-ring protein C-terminal JV59_RS11140 PF02049 Flagellar hook-basal body complex protein FliE JV59_RS11145 PF02954 Bacterial regulatory protein, Fis family JV59_RS11145 PF00072 Response regulator receiver domain JV59_RS11145 PF00158 Sigma-54 interaction domain JV59_RS11150 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS11150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS11150 PF13188 PAS domain JV59_RS11155 PF06490 Flagellar regulatory protein FleQ JV59_RS11155 PF02954 Bacterial regulatory protein, Fis family JV59_RS11155 PF00158 Sigma-54 interaction domain JV59_RS11160 PF02561 Flagellar protein FliS JV59_RS11170 PF07196 Flagellin hook IN motif JV59_RS11170 PF07195 Flagellar hook-associated protein 2 C-terminus JV59_RS11170 PF02465 Flagellar hook-associated protein 2 N-terminus JV59_RS11175 PF03646 FlaG protein JV59_RS11180 PF00669 Bacterial flagellin N-terminal helical region JV59_RS11180 PF07196 Flagellin hook IN motif JV59_RS11180 PF00700 Bacterial flagellin C-terminal helical region JV59_RS11185 PF00669 Bacterial flagellin N-terminal helical region JV59_RS11185 PF07196 Flagellin hook IN motif JV59_RS11185 PF00700 Bacterial flagellin C-terminal helical region JV59_RS11190 PF00700 Bacterial flagellin C-terminal helical region JV59_RS11190 PF00669 Bacterial flagellin N-terminal helical region JV59_RS11190 PF07196 Flagellin hook IN motif JV59_RS11195 PF04261 Dyp-type peroxidase family JV59_RS11200 PF11143 Protein of unknown function (DUF2919) JV59_RS11205 PF03918 Cytochrome C biogenesis protein JV59_RS11210 PF08534 Redoxin JV59_RS11215 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JV59_RS11215 PF01578 Cytochrome C assembly protein JV59_RS11220 PF03916 Polysulphide reductase, NrfD JV59_RS11225 PF00037 4Fe-4S binding domain JV59_RS11225 PF13247 4Fe-4S dicluster domain JV59_RS11235 PF02335 Cytochrome c552 JV59_RS11260 PF03960 ArsC family JV59_RS11265 PF07687 Peptidase dimerisation domain JV59_RS11265 PF01546 Peptidase family M20/M25/M40 JV59_RS11275 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) JV59_RS11280 PF07348 Syd protein (SUKH-2) JV59_RS11285 PF14489 QueF-like protein JV59_RS11285 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JV59_RS11295 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS11300 PF11892 Domain of unknown function (DUF3412) JV59_RS11300 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JV59_RS11300 PF03641 Possible lysine decarboxylase JV59_RS11305 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JV59_RS11305 PF01367 5'-3' exonuclease, C-terminal SAM fold JV59_RS11310 PF01223 DNA/RNA non-specific endonuclease JV59_RS11315 PF01728 FtsJ-like methyltransferase JV59_RS11315 PF18125 RlmM ferredoxin-like domain JV59_RS11330 PF03466 LysR substrate binding domain JV59_RS11330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS11335 PF02926 THUMP domain JV59_RS11335 PF02568 Thiamine biosynthesis protein (ThiI) JV59_RS11340 PF00691 OmpA family JV59_RS11340 PF13677 Membrane MotB of proton-channel complex MotA/MotB JV59_RS11345 PF01618 MotA/TolQ/ExbB proton channel family JV59_RS11350 PF02609 Exonuclease VII small subunit JV59_RS11355 PF00348 Polyprenyl synthetase JV59_RS11360 PF02779 Transketolase, pyrimidine binding domain JV59_RS11360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JV59_RS11360 PF02780 Transketolase, C-terminal domain JV59_RS11365 PF00849 RNA pseudouridylate synthase JV59_RS11370 PF04287 tRNA pseudouridine synthase C JV59_RS11390 PF00549 CoA-ligase JV59_RS11390 PF02629 CoA binding domain JV59_RS11395 PF08442 ATP-grasp domain JV59_RS11395 PF00549 CoA-ligase JV59_RS11400 PF02817 e3 binding domain JV59_RS11400 PF00364 Biotin-requiring enzyme JV59_RS11400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JV59_RS11405 PF02779 Transketolase, pyrimidine binding domain JV59_RS11405 PF16870 2-oxoglutarate dehydrogenase C-terminal JV59_RS11405 PF00676 Dehydrogenase E1 component JV59_RS11405 PF16078 2-oxoglutarate dehydrogenase N-terminus JV59_RS11410 PF13085 2Fe-2S iron-sulfur cluster binding domain JV59_RS11415 PF02910 Fumarate reductase flavoprotein C-term JV59_RS11415 PF00890 FAD binding domain JV59_RS11420 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JV59_RS11425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JV59_RS11430 PF00285 Citrate synthase, C-terminal domain JV59_RS11435 PF01784 NIF3 (NGG1p interacting factor 3) JV59_RS11445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JV59_RS11445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JV59_RS11445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JV59_RS11445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JV59_RS11450 PF03925 SeqA protein C-terminal domain JV59_RS11450 PF17206 SeqA protein N-terminal domain JV59_RS11455 PF12697 Alpha/beta hydrolase family JV59_RS11465 PF00258 Flavodoxin JV59_RS11475 PF01475 Ferric uptake regulator family JV59_RS11480 PF01180 Dihydroorotate dehydrogenase JV59_RS11490 PF00749 tRNA synthetases class I (E and Q), catalytic domain JV59_RS11490 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JV59_RS11495 PF02378 Phosphotransferase system, EIIC JV59_RS11495 PF00367 phosphotransferase system, EIIB JV59_RS11495 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JV59_RS11500 PF01979 Amidohydrolase family JV59_RS11505 PF00480 ROK family JV59_RS11505 PF01047 MarR family JV59_RS11510 PF02254 TrkA-N domain JV59_RS11510 PF00999 Sodium/hydrogen exchanger family JV59_RS11515 PF13537 Glutamine amidotransferase domain JV59_RS11515 PF00733 Asparagine synthase JV59_RS11520 PF00854 POT family JV59_RS11525 PF02838 Glycosyl hydrolase family 20, domain 2 JV59_RS11525 PF00728 Glycosyl hydrolase family 20, catalytic domain JV59_RS11525 PF03173 Putative carbohydrate binding domain JV59_RS11525 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain JV59_RS11545 PF01713 Smr domain JV59_RS11550 PF00849 RNA pseudouridylate synthase JV59_RS11550 PF01479 S4 domain JV59_RS11560 PF02769 AIR synthase related protein, C-terminal domain JV59_RS11560 PF00586 AIR synthase related protein, N-terminal domain JV59_RS11565 PF00551 Formyl transferase JV59_RS11575 PF06786 Uncharacterised protein family (UPF0253) JV59_RS11595 PF00497 Bacterial extracellular solute-binding proteins, family 3 JV59_RS11595 PF01464 Transglycosylase SLT domain JV59_RS11600 PF14437 MafB19-like deaminase JV59_RS11605 PF03806 AbgT putative transporter family JV59_RS11625 PF07963 Prokaryotic N-terminal methylation motif JV59_RS11630 PF00114 Pilin (bacterial filament) JV59_RS11630 PF07963 Prokaryotic N-terminal methylation motif JV59_RS11635 PF00684 DnaJ central domain JV59_RS11635 PF01556 DnaJ C terminal domain JV59_RS11635 PF00226 DnaJ domain JV59_RS11640 PF00012 Hsp70 protein JV59_RS11645 PF00375 Sodium:dicarboxylate symporter family JV59_RS11650 PF01025 GrpE JV59_RS11655 PF01513 ATP-NAD kinase JV59_RS11660 PF02463 RecF/RecN/SMC N terminal domain JV59_RS11665 PF04355 SmpA / OmlA family JV59_RS11670 PF03658 RnfH family Ubiquitin JV59_RS11675 PF03364 Polyketide cyclase / dehydrase and lipid transport JV59_RS11680 PF01668 SmpB protein JV59_RS11690 PF11867 Domain of unknown function (DUF3387) JV59_RS11690 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JV59_RS11690 PF18766 SWI2/SNF2 ATPase JV59_RS11710 PF12161 HsdM N-terminal domain JV59_RS11710 PF02384 N-6 DNA Methylase JV59_RS11725 PF13426 PAS domain JV59_RS11725 PF08447 PAS fold JV59_RS11725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS11730 PF00924 Mechanosensitive ion channel JV59_RS11735 PF02028 BCCT, betaine/carnitine/choline family transporter JV59_RS11750 PF00082 Subtilase family JV59_RS11750 PF05922 Peptidase inhibitor I9 JV59_RS11755 PF01553 Acyltransferase JV59_RS11760 PF01584 CheW-like domain JV59_RS11760 PF00072 Response regulator receiver domain JV59_RS11780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS11780 PF03466 LysR substrate binding domain JV59_RS11785 PF01266 FAD dependent oxidoreductase JV59_RS11790 PF01235 Sodium:alanine symporter family JV59_RS11795 PF01184 GPR1/FUN34/yaaH family JV59_RS11800 PF00704 Glycosyl hydrolases family 18 JV59_RS11800 PF06483 Chitinase C JV59_RS11805 PF00958 GMP synthase C terminal domain JV59_RS11805 PF02540 NAD synthase JV59_RS11805 PF00117 Glutamine amidotransferase class-I JV59_RS11810 PF00478 IMP dehydrogenase / GMP reductase domain JV59_RS11810 PF00571 CBS domain JV59_RS11815 PF13742 OB-fold nucleic acid binding domain JV59_RS11815 PF02601 Exonuclease VII, large subunit JV59_RS11825 PF13185 GAF domain JV59_RS11825 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS11835 PF01926 50S ribosome-binding GTPase JV59_RS11835 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JV59_RS11840 PF13360 PQQ-like domain JV59_RS11845 PF09976 Tetratricopeptide repeat-like domain JV59_RS11850 PF13393 Histidyl-tRNA synthetase JV59_RS11850 PF03129 Anticodon binding domain JV59_RS11855 PF04551 GcpE protein JV59_RS11860 PF13464 Domain of unknown function (DUF4115) JV59_RS11865 PF04055 Radical SAM superfamily JV59_RS11870 PF02657 Fe-S metabolism associated domain JV59_RS11875 PF00899 ThiF family JV59_RS11880 PF03562 MltA specific insert domain JV59_RS11880 PF06725 3D domain JV59_RS11890 PF00696 Amino acid kinase family JV59_RS11890 PF00583 Acetyltransferase (GNAT) family JV59_RS11900 PF13538 UvrD-like helicase C-terminal domain JV59_RS11905 PF13361 UvrD-like helicase C-terminal domain JV59_RS11905 PF00580 UvrD/REP helicase N-terminal domain JV59_RS11905 PF12705 PD-(D/E)XK nuclease superfamily JV59_RS11910 PF17946 RecC C-terminal domain JV59_RS11920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS11920 PF03466 LysR substrate binding domain JV59_RS11925 PF00873 AcrB/AcrD/AcrF family JV59_RS11930 PF00529 HlyD membrane-fusion protein of T1SS JV59_RS11930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JV59_RS11935 PF00440 Bacterial regulatory proteins, tetR family JV59_RS11940 PF07130 YebG protein JV59_RS11945 PF03932 CutC family JV59_RS11950 PF03976 Polyphosphate kinase 2 (PPK2) JV59_RS11955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS11955 PF03466 LysR substrate binding domain JV59_RS11980 PF01895 PhoU domain JV59_RS11985 PF00005 ABC transporter JV59_RS11990 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS11995 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS12000 PF17941 Polyphosphate kinase C-terminal domain 1 JV59_RS12000 PF13089 Polyphosphate kinase N-terminal domain JV59_RS12000 PF13090 Polyphosphate kinase C-terminal domain 2 JV59_RS12000 PF02503 Polyphosphate kinase middle domain JV59_RS12005 PF02541 Ppx/GppA phosphatase family JV59_RS12010 PF12849 PBP superfamily domain JV59_RS12015 PF00989 PAS fold JV59_RS12015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS12015 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS12015 PF11808 Phosphate regulon sensor protein PhoR JV59_RS12020 PF00486 Transcriptional regulatory protein, C terminal JV59_RS12020 PF00072 Response regulator receiver domain JV59_RS12025 PF04381 Putative exonuclease, RdgC JV59_RS12030 PF16325 Peptidase family U32 C-terminal domain JV59_RS12030 PF01136 Peptidase family U32 JV59_RS12035 PF12838 4Fe-4S dicluster domain JV59_RS12040 PF03411 Penicillin-insensitive murein endopeptidase JV59_RS12055 PF02355 Protein export membrane protein JV59_RS12055 PF07549 SecD/SecF GG Motif JV59_RS12060 PF02355 Protein export membrane protein JV59_RS12060 PF07549 SecD/SecF GG Motif JV59_RS12060 PF13721 SecD export protein N-terminal TM region JV59_RS12065 PF02699 Preprotein translocase subunit JV59_RS12075 PF02547 Queuosine biosynthesis protein JV59_RS12080 PF00571 CBS domain JV59_RS12085 PF00463 Isocitrate lyase family JV59_RS12090 PF01274 Malate synthase JV59_RS12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS12095 PF03466 LysR substrate binding domain JV59_RS12100 PF00578 AhpC/TSA family JV59_RS12100 PF10417 C-terminal domain of 1-Cys peroxiredoxin JV59_RS12105 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JV59_RS12105 PF14602 Hexapeptide repeat of succinyl-transferase JV59_RS12115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JV59_RS12125 PF12833 Helix-turn-helix domain JV59_RS12130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JV59_RS12130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JV59_RS12130 PF02378 Phosphotransferase system, EIIC JV59_RS12140 PF01588 Putative tRNA binding domain JV59_RS12145 PF00356 Bacterial regulatory proteins, lacI family JV59_RS12150 PF01263 Aldose 1-epimerase JV59_RS12155 PF00288 GHMP kinases N terminal domain JV59_RS12155 PF10509 Galactokinase galactose-binding signature JV59_RS12155 PF08544 GHMP kinases C terminal JV59_RS12160 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JV59_RS12160 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JV59_RS12165 PF16363 GDP-mannose 4,6 dehydratase JV59_RS12170 PF00356 Bacterial regulatory proteins, lacI family JV59_RS12175 PF02929 Beta galactosidase small chain JV59_RS12175 PF02837 Glycosyl hydrolases family 2, sugar binding domain JV59_RS12175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JV59_RS12175 PF00703 Glycosyl hydrolases family 2 JV59_RS12175 PF16353 Domain of unknown function(DUF4981) JV59_RS12180 PF04074 YhcH/YjgK/YiaL JV59_RS12185 PF13520 Amino acid permease JV59_RS12195 PF12706 Beta-lactamase superfamily domain JV59_RS12205 PF01204 Trehalase JV59_RS12220 PF02056 Family 4 glycosyl hydrolase JV59_RS12220 PF11975 Family 4 glycosyl hydrolase C-terminal domain JV59_RS12225 PF12833 Helix-turn-helix domain JV59_RS12260 PF00437 Type II/IV secretion system protein JV59_RS12275 PF04972 BON domain JV59_RS12275 PF00263 Bacterial type II and III secretion system protein JV59_RS12275 PF13629 Pilus formation protein N terminal region JV59_RS12305 PF12833 Helix-turn-helix domain JV59_RS12305 PF02805 Metal binding domain of Ada JV59_RS12315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS12315 PF03466 LysR substrate binding domain JV59_RS12325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS12325 PF03466 LysR substrate binding domain JV59_RS12330 PF03764 Elongation factor G, domain IV JV59_RS12330 PF03144 Elongation factor Tu domain 2 JV59_RS12330 PF00009 Elongation factor Tu GTP binding domain JV59_RS12330 PF14492 Elongation Factor G, domain II JV59_RS12330 PF00679 Elongation factor G C-terminus JV59_RS12335 PF00334 Nucleoside diphosphate kinase JV59_RS12340 PF12404 Peptidase JV59_RS12340 PF00883 Cytosol aminopeptidase family, catalytic domain JV59_RS12345 PF04384 Iron-sulphur cluster assembly JV59_RS12350 PF00111 2Fe-2S iron-sulfur cluster binding domain JV59_RS12355 PF00012 Hsp70 protein JV59_RS12360 PF07743 HSCB C-terminal oligomerisation domain JV59_RS12360 PF00226 DnaJ domain JV59_RS12365 PF01521 Iron-sulphur cluster biosynthesis JV59_RS12370 PF01592 NifU-like N terminal domain JV59_RS12375 PF00266 Aminotransferase class-V JV59_RS12380 PF02082 Transcriptional regulator JV59_RS12385 PF00588 SpoU rRNA Methylase family JV59_RS12390 PF00459 Inositol monophosphatase family JV59_RS12430 PF10431 C-terminal, D2-small domain, of ClpB protein JV59_RS12430 PF17871 AAA lid domain JV59_RS12430 PF07724 AAA domain (Cdc48 subfamily) JV59_RS12430 PF02861 Clp amino terminal domain, pathogenicity island component JV59_RS12430 PF00004 ATPase family associated with various cellular activities (AAA) JV59_RS12435 PF02578 Multi-copper polyphenol oxidoreductase laccase JV59_RS12440 PF01479 S4 domain JV59_RS12440 PF00849 RNA pseudouridylate synthase JV59_RS12445 PF13525 Outer membrane lipoprotein JV59_RS12450 PF01464 Transglycosylase SLT domain JV59_RS12455 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JV59_RS12460 PF00800 Prephenate dehydratase JV59_RS12460 PF01817 Chorismate mutase type II JV59_RS12465 PF13416 Bacterial extracellular solute-binding protein JV59_RS12470 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS12470 PF00563 EAL domain JV59_RS12475 PF01931 Protein of unknown function DUF84 JV59_RS12480 PF01371 Trp repressor protein JV59_RS12485 PF14718 Soluble lytic murein transglycosylase L domain JV59_RS12485 PF01464 Transglycosylase SLT domain JV59_RS12490 PF12848 ABC transporter JV59_RS12490 PF00005 ABC transporter JV59_RS12495 PF07238 PilZ domain JV59_RS12500 PF04225 Opacity-associated protein A LysM-like domain JV59_RS12500 PF01551 Peptidase family M23 JV59_RS12505 PF01817 Chorismate mutase type II JV59_RS12505 PF02153 Prephenate dehydrogenase JV59_RS12515 PF07694 5TMR of 5TMR-LYT JV59_RS12515 PF06580 Histidine kinase JV59_RS12520 PF04397 LytTr DNA-binding domain JV59_RS12520 PF00072 Response regulator receiver domain JV59_RS12525 PF00933 Glycosyl hydrolase family 3 N terminal domain JV59_RS12530 PF01418 Helix-turn-helix domain, rpiR family JV59_RS12530 PF01380 SIS domain JV59_RS12540 PF01869 BadF/BadG/BcrA/BcrD ATPase family JV59_RS12545 PF03702 Anhydro-N-acetylmuramic acid kinase JV59_RS12550 PF13580 SIS domain JV59_RS12560 PF02554 Carbon starvation protein CstA JV59_RS12565 PF02401 LytB protein JV59_RS12570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JV59_RS12575 PF01252 Signal peptidase (SPase) II JV59_RS12580 PF00133 tRNA synthetases class I (I, L, M and V) JV59_RS12580 PF08264 Anticodon-binding domain of tRNA JV59_RS12580 PF06827 Zinc finger found in FPG and IleRS JV59_RS12585 PF06574 FAD synthetase JV59_RS12585 PF01687 Riboflavin kinase JV59_RS12590 PF03023 Lipid II flippase MurJ JV59_RS12595 PF01649 Ribosomal protein S20 JV59_RS12600 PF01022 Bacterial regulatory protein, arsR family JV59_RS12605 PF03466 LysR substrate binding domain JV59_RS12605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS12615 PF02690 Na+/Pi-cotransporter JV59_RS12620 PF00303 Thymidylate synthase JV59_RS12625 PF01790 Prolipoprotein diacylglyceryl transferase JV59_RS12630 PF01925 Sulfite exporter TauE/SafE JV59_RS12635 PF01590 GAF domain JV59_RS12635 PF00391 PEP-utilising enzyme, mobile domain JV59_RS12635 PF05524 PEP-utilising enzyme, N-terminal JV59_RS12635 PF02896 PEP-utilising enzyme, TIM barrel domain JV59_RS12640 PF00293 NUDIX domain JV59_RS12645 PF02976 DNA mismatch repair enzyme MutH JV59_RS12655 PF00248 Aldo/keto reductase family JV59_RS12665 PF00158 Sigma-54 interaction domain JV59_RS12665 PF00072 Response regulator receiver domain JV59_RS12665 PF02954 Bacterial regulatory protein, Fis family JV59_RS12670 PF01554 MatE JV59_RS12675 PF01047 MarR family JV59_RS12680 PF07719 Tetratricopeptide repeat JV59_RS12680 PF13181 Tetratricopeptide repeat JV59_RS12685 PF03725 3' exoribonuclease family, domain 2 JV59_RS12685 PF01138 3' exoribonuclease family, domain 1 JV59_RS12685 PF00575 S1 RNA binding domain JV59_RS12685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JV59_RS12685 PF00013 KH domain JV59_RS12690 PF00312 Ribosomal protein S15 JV59_RS12695 PF01048 Phosphorylase superfamily JV59_RS12700 PF03186 CobD/Cbib protein JV59_RS12705 PF01497 Periplasmic binding protein JV59_RS12710 PF03458 UPF0126 domain JV59_RS12715 PF00291 Pyridoxal-phosphate dependent enzyme JV59_RS12715 PF14821 Threonine synthase N terminus JV59_RS12720 PF00288 GHMP kinases N terminal domain JV59_RS12720 PF08544 GHMP kinases C terminal JV59_RS12725 PF00696 Amino acid kinase family JV59_RS12725 PF03447 Homoserine dehydrogenase, NAD binding domain JV59_RS12725 PF01842 ACT domain JV59_RS12725 PF13840 ACT domain JV59_RS12725 PF00742 Homoserine dehydrogenase JV59_RS12735 PF03737 Aldolase/RraA JV59_RS12745 PF00486 Transcriptional regulatory protein, C terminal JV59_RS12745 PF00072 Response regulator receiver domain JV59_RS12750 PF00294 pfkB family carbohydrate kinase JV59_RS12750 PF01467 Cytidylyltransferase-like JV59_RS12755 PF03710 Glutamate-ammonia ligase adenylyltransferase JV59_RS12755 PF08335 GlnD PII-uridylyltransferase JV59_RS12765 PF00027 Cyclic nucleotide-binding domain JV59_RS12765 PF07885 Ion channel JV59_RS12770 PF01928 CYTH domain JV59_RS12775 PF01865 Protein of unknown function DUF47 JV59_RS12780 PF01384 Phosphate transporter family JV59_RS12785 PF08239 Bacterial SH3 domain JV59_RS12790 PF16537 Type II secretion system protein B JV59_RS12795 PF01471 Putative peptidoglycan binding domain JV59_RS12795 PF13401 AAA domain JV59_RS12800 PF01743 Poly A polymerase head domain JV59_RS12800 PF12627 Probable RNA and SrmB- binding site of polymerase A JV59_RS12800 PF01966 HD domain JV59_RS12805 PF00113 Enolase, C-terminal TIM barrel domain JV59_RS12805 PF03952 Enolase, N-terminal domain JV59_RS12810 PF03952 Enolase, N-terminal domain JV59_RS12810 PF00113 Enolase, C-terminal TIM barrel domain JV59_RS12815 PF00113 Enolase, C-terminal TIM barrel domain JV59_RS12815 PF03952 Enolase, N-terminal domain JV59_RS12820 PF03952 Enolase, N-terminal domain JV59_RS12820 PF00113 Enolase, C-terminal TIM barrel domain JV59_RS12825 PF06418 CTP synthase N-terminus JV59_RS12825 PF00117 Glutamine amidotransferase class-I JV59_RS12830 PF03819 MazG nucleotide pyrophosphohydrolase domain JV59_RS12835 PF02824 TGS domain JV59_RS12835 PF13291 ACT domain JV59_RS12835 PF04607 Region found in RelA / SpoT proteins JV59_RS12840 PF05958 tRNA (Uracil-5-)-methyltransferase JV59_RS12840 PF01938 TRAM domain JV59_RS12845 PF00072 Response regulator receiver domain JV59_RS12845 PF01627 Hpt domain JV59_RS12845 PF00672 HAMP domain JV59_RS12845 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JV59_RS12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS12845 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS12850 PF01648 4'-phosphopantetheinyl transferase superfamily JV59_RS12855 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JV59_RS12860 PF02565 Recombination protein O C terminal JV59_RS12860 PF11967 Recombination protein O N terminal JV59_RS12865 PF07650 KH domain JV59_RS12865 PF01926 50S ribosome-binding GTPase JV59_RS12875 PF10502 Signal peptidase, peptidase S26 JV59_RS12880 PF00009 Elongation factor Tu GTP binding domain JV59_RS12880 PF03144 Elongation factor Tu domain 2 JV59_RS12880 PF00679 Elongation factor G C-terminus JV59_RS12880 PF06421 GTP-binding protein LepA C-terminus JV59_RS12890 PF03888 MucB/RseB N-terminal domain JV59_RS12890 PF17188 MucB/RseB C-terminal domain JV59_RS12895 PF03873 Anti sigma-E protein RseA, C-terminal domain JV59_RS12895 PF03872 Anti sigma-E protein RseA, N-terminal domain JV59_RS12900 PF04542 Sigma-70 region 2 JV59_RS12900 PF08281 Sigma-70, region 4 JV59_RS12905 PF02910 Fumarate reductase flavoprotein C-term JV59_RS12905 PF00890 FAD binding domain JV59_RS12915 PF03937 Flavinator of succinate dehydrogenase JV59_RS12935 PF01494 FAD binding domain JV59_RS12940 PF01494 FAD binding domain JV59_RS12945 PF03695 Uncharacterised protein family (UPF0149) JV59_RS12950 PF05164 Cell division protein ZapA JV59_RS12955 PF01812 5-formyltetrahydrofolate cyclo-ligase family JV59_RS12960 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JV59_RS12965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JV59_RS12965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JV59_RS12965 PF01842 ACT domain JV59_RS12970 PF07690 Major Facilitator Superfamily JV59_RS12975 PF03009 Glycerophosphoryl diester phosphodiesterase family JV59_RS12980 PF10369 Small subunit of acetolactate synthase JV59_RS12985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JV59_RS12985 PF00205 Thiamine pyrophosphate enzyme, central domain JV59_RS12985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JV59_RS12990 PF00501 AMP-binding enzyme JV59_RS12995 PF03466 LysR substrate binding domain JV59_RS12995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS13015 PF00682 HMGL-like JV59_RS13015 PF08502 LeuA allosteric (dimerisation) domain JV59_RS13020 PF00180 Isocitrate/isopropylmalate dehydrogenase JV59_RS13025 PF00330 Aconitase family (aconitate hydratase) JV59_RS13030 PF00694 Aconitase C-terminal domain JV59_RS13080 PF00072 Response regulator receiver domain JV59_RS13100 PF02664 S-Ribosylhomocysteinase (LuxS) JV59_RS13110 PF04262 Glutamate-cysteine ligase JV59_RS13115 PF05193 Peptidase M16 inactive domain JV59_RS13115 PF00675 Insulinase (Peptidase family M16) JV59_RS13120 PF09335 SNARE associated Golgi protein JV59_RS13125 PF00107 Zinc-binding dehydrogenase JV59_RS13125 PF08240 Alcohol dehydrogenase GroES-like domain JV59_RS13130 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JV59_RS13135 PF02436 Conserved carboxylase domain JV59_RS13135 PF00682 HMGL-like JV59_RS13135 PF00364 Biotin-requiring enzyme JV59_RS13140 PF04277 Oxaloacetate decarboxylase, gamma chain JV59_RS13175 PF02599 Global regulator protein family JV59_RS13180 PF01842 ACT domain JV59_RS13180 PF00696 Amino acid kinase family JV59_RS13180 PF13840 ACT domain JV59_RS13185 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JV59_RS13185 PF02272 DHHA1 domain JV59_RS13185 PF01411 tRNA synthetases class II (A) JV59_RS13190 PF02631 RecX family JV59_RS13195 PF00154 recA bacterial DNA recombination protein JV59_RS13200 PF02464 Competence-damaged protein JV59_RS13205 PF05190 MutS family domain IV JV59_RS13205 PF00488 MutS domain V JV59_RS13205 PF05192 MutS domain III JV59_RS13205 PF01624 MutS domain I JV59_RS13205 PF05188 MutS domain II JV59_RS13210 PF03739 Lipopolysaccharide export system permease LptF/LptG JV59_RS13215 PF03739 Lipopolysaccharide export system permease LptF/LptG JV59_RS13220 PF00883 Cytosol aminopeptidase family, catalytic domain JV59_RS13220 PF02789 Cytosol aminopeptidase family, N-terminal domain JV59_RS13240 PF05987 Bacterial protein of unknown function (DUF898) JV59_RS13250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JV59_RS13250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JV59_RS13255 PF00849 RNA pseudouridylate synthase JV59_RS13265 PF00271 Helicase conserved C-terminal domain JV59_RS13265 PF12137 RNA polymerase recycling family C-terminal JV59_RS13265 PF00176 SNF2 family N-terminal domain JV59_RS13265 PF18339 RapA N-terminal Tudor like domain 1 JV59_RS13265 PF18337 RapA N-terminal Tudor like domain JV59_RS13270 PF13638 PIN domain JV59_RS13270 PF02562 PhoH-like protein JV59_RS13275 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JV59_RS13275 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JV59_RS13280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JV59_RS13280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JV59_RS13285 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JV59_RS13285 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JV59_RS13290 PF01042 Endoribonuclease L-PSP JV59_RS13300 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JV59_RS13300 PF00056 lactate/malate dehydrogenase, NAD binding domain JV59_RS13305 PF02863 Arginine repressor, C-terminal domain JV59_RS13305 PF01316 Arginine repressor, DNA binding domain JV59_RS13310 PF16868 NMT1-like family JV59_RS13320 PF00582 Universal stress protein family JV59_RS13335 PF06877 Regulator of ribonuclease activity B JV59_RS13345 PF01553 Acyltransferase JV59_RS13350 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JV59_RS13355 PF01722 BolA-like protein JV59_RS13365 PF05494 MlaC protein JV59_RS13370 PF02470 MlaD protein JV59_RS13375 PF02405 Permease MlaE JV59_RS13380 PF00005 ABC transporter JV59_RS13385 PF01699 Sodium/calcium exchanger protein JV59_RS13405 PF03968 OstA-like protein JV59_RS13410 PF12399 Branched-chain amino acid ATP-binding cassette transporter JV59_RS13410 PF00005 ABC transporter JV59_RS13415 PF00309 Sigma-54 factor, Activator interacting domain (AID) JV59_RS13415 PF04552 Sigma-54, DNA binding domain JV59_RS13415 PF04963 Sigma-54 factor, core binding domain JV59_RS13420 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JV59_RS13425 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JV59_RS13430 PF03668 P-loop ATPase protein family JV59_RS13435 PF00381 PTS HPr component phosphorylation site JV59_RS13440 PF03448 MgtE intracellular N domain JV59_RS13440 PF00571 CBS domain JV59_RS13440 PF01769 Divalent cation transporter JV59_RS13445 PF02574 Homocysteine S-methyltransferase JV59_RS13445 PF00809 Pterin binding enzyme JV59_RS13445 PF02310 B12 binding domain JV59_RS13445 PF02607 B12 binding domain JV59_RS13445 PF02965 Vitamin B12 dependent methionine synthase, activation domain JV59_RS13450 PF00999 Sodium/hydrogen exchanger family JV59_RS13480 PF01507 Phosphoadenosine phosphosulfate reductase family JV59_RS13485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JV59_RS13485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JV59_RS13490 PF00258 Flavodoxin JV59_RS13490 PF00175 Oxidoreductase NAD-binding domain JV59_RS13490 PF00667 FAD binding domain JV59_RS13510 PF01207 Dihydrouridine synthase (Dus) JV59_RS13635 PF00072 Response regulator receiver domain JV59_RS13640 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS13640 PF01627 Hpt domain JV59_RS13640 PF00072 Response regulator receiver domain JV59_RS13640 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JV59_RS13640 PF00672 HAMP domain JV59_RS13640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS13645 PF01475 Ferric uptake regulator family JV59_RS13660 PF02080 TrkA-C domain JV59_RS13660 PF03600 Citrate transporter JV59_RS13665 PF00009 Elongation factor Tu GTP binding domain JV59_RS13670 PF01507 Phosphoadenosine phosphosulfate reductase family JV59_RS13675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JV59_RS13675 PF14824 Sirohaem biosynthesis protein central JV59_RS13675 PF10414 Sirohaem synthase dimerisation region JV59_RS13680 PF02872 5'-nucleotidase, C-terminal domain JV59_RS13680 PF00149 Calcineurin-like phosphoesterase JV59_RS13690 PF13673 Acetyltransferase (GNAT) domain JV59_RS13715 PF01196 Ribosomal protein L17 JV59_RS13720 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JV59_RS13720 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JV59_RS13720 PF01000 RNA polymerase Rpb3/RpoA insert domain JV59_RS13725 PF01479 S4 domain JV59_RS13725 PF00163 Ribosomal protein S4/S9 N-terminal domain JV59_RS13730 PF00411 Ribosomal protein S11 JV59_RS13735 PF00416 Ribosomal protein S13/S18 JV59_RS13740 PF00444 Ribosomal protein L36 JV59_RS13745 PF00344 SecY translocase JV59_RS13750 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JV59_RS13755 PF00327 Ribosomal protein L30p/L7e JV59_RS13760 PF03719 Ribosomal protein S5, C-terminal domain JV59_RS13760 PF00333 Ribosomal protein S5, N-terminal domain JV59_RS13765 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JV59_RS13770 PF00347 Ribosomal protein L6 JV59_RS13775 PF00410 Ribosomal protein S8 JV59_RS13780 PF00253 Ribosomal protein S14p/S29e JV59_RS13785 PF00281 Ribosomal protein L5 JV59_RS13785 PF00673 ribosomal L5P family C-terminus JV59_RS13790 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JV59_RS13790 PF00467 KOW motif JV59_RS13795 PF00238 Ribosomal protein L14p/L23e JV59_RS13800 PF00366 Ribosomal protein S17 JV59_RS13805 PF00831 Ribosomal L29 protein JV59_RS13810 PF00252 Ribosomal protein L16p/L10e JV59_RS13815 PF00189 Ribosomal protein S3, C-terminal domain JV59_RS13815 PF07650 KH domain JV59_RS13820 PF00237 Ribosomal protein L22p/L17e JV59_RS13825 PF00203 Ribosomal protein S19 JV59_RS13830 PF03947 Ribosomal Proteins L2, C-terminal domain JV59_RS13830 PF00181 Ribosomal Proteins L2, RNA binding domain JV59_RS13835 PF00276 Ribosomal protein L23 JV59_RS13840 PF00573 Ribosomal protein L4/L1 family JV59_RS13845 PF00297 Ribosomal protein L3 JV59_RS13850 PF00338 Ribosomal protein S10p/S20e JV59_RS13855 PF08032 RNA 2'-O ribose methyltransferase substrate binding JV59_RS13855 PF00588 SpoU rRNA Methylase family JV59_RS13860 PF00575 S1 RNA binding domain JV59_RS13860 PF17876 Cold shock domain JV59_RS13860 PF08461 Ribonuclease R winged-helix domain JV59_RS13860 PF08206 Ribonuclease B OB domain JV59_RS13860 PF00773 RNB domain JV59_RS13865 PF01979 Amidohydrolase family JV59_RS13870 PF08238 Sel1 repeat JV59_RS13875 PF00709 Adenylosuccinate synthetase JV59_RS13885 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JV59_RS13895 PF00999 Sodium/hydrogen exchanger family JV59_RS13895 PF02254 TrkA-N domain JV59_RS13900 PF02525 Flavodoxin-like fold JV59_RS13905 PF12848 ABC transporter JV59_RS13905 PF00005 ABC transporter JV59_RS13915 PF00561 alpha/beta hydrolase fold JV59_RS13920 PF06794 Uncharacterised protein family (UPF0270) JV59_RS13925 PF00485 Phosphoribulokinase / Uridine kinase family JV59_RS13930 PF00027 Cyclic nucleotide-binding domain JV59_RS13930 PF13545 Crp-like helix-turn-helix domain JV59_RS13940 PF00171 Aldehyde dehydrogenase family JV59_RS13945 PF04958 Arginine N-succinyltransferase beta subunit JV59_RS13950 PF00202 Aminotransferase class-III JV59_RS13955 PF00117 Glutamine amidotransferase class-I JV59_RS14010 PF04186 FxsA cytoplasmic membrane protein JV59_RS14015 PF00206 Lyase JV59_RS14015 PF10415 Fumarase C C-terminus JV59_RS14020 PF03605 Anaerobic c4-dicarboxylate membrane transporter JV59_RS14025 PF03606 C4-dicarboxylate anaerobic carrier JV59_RS14035 PF00696 Amino acid kinase family JV59_RS14040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JV59_RS14040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JV59_RS14045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JV59_RS14045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JV59_RS14050 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JV59_RS14050 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JV59_RS14055 PF01316 Arginine repressor, DNA binding domain JV59_RS14055 PF02863 Arginine repressor, C-terminal domain JV59_RS14060 PF02683 Cytochrome C biogenesis protein transmembrane region JV59_RS14060 PF11412 Disulphide bond corrector protein DsbC JV59_RS14065 PF00196 Bacterial regulatory proteins, luxR family JV59_RS14065 PF00072 Response regulator receiver domain JV59_RS14070 PF01914 MarC family integral membrane protein JV59_RS14080 PF00474 Sodium:solute symporter family JV59_RS14090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS14090 PF00072 Response regulator receiver domain JV59_RS14090 PF09308 LuxQ, periplasmic JV59_RS14090 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS14095 PF12832 MFS_1 like family JV59_RS14110 PF13193 AMP-binding enzyme C-terminal domain JV59_RS14110 PF00501 AMP-binding enzyme JV59_RS14110 PF16177 Acetyl-coenzyme A synthetase N-terminus JV59_RS14115 PF01220 Dehydroquinase class II JV59_RS14120 PF00364 Biotin-requiring enzyme JV59_RS14125 PF00289 Biotin carboxylase, N-terminal domain JV59_RS14125 PF02785 Biotin carboxylase C-terminal domain JV59_RS14125 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JV59_RS14135 PF01207 Dihydrouridine synthase (Dus) JV59_RS14140 PF02954 Bacterial regulatory protein, Fis family JV59_RS14145 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS14145 PF08448 PAS fold JV59_RS14150 PF13411 MerR HTH family regulatory protein JV59_RS14155 PF01808 AICARFT/IMPCHase bienzyme JV59_RS14155 PF02142 MGS-like domain JV59_RS14160 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JV59_RS14160 PF02843 Phosphoribosylglycinamide synthetase, C domain JV59_RS14160 PF02844 Phosphoribosylglycinamide synthetase, N domain JV59_RS14170 PF00216 Bacterial DNA-binding protein JV59_RS14175 PF01595 Cyclin M transmembrane N-terminal domain JV59_RS14175 PF00571 CBS domain JV59_RS14180 PF04222 Protein of unknown function (DUF416) JV59_RS14185 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JV59_RS14190 PF03167 Uracil DNA glycosylase superfamily JV59_RS14195 PF00311 Phosphoenolpyruvate carboxylase JV59_RS14200 PF03551 Transcriptional regulator PadR-like family JV59_RS14200 PF10400 Virulence activator alpha C-term JV59_RS14205 PF00132 Bacterial transferase hexapeptide (six repeats) JV59_RS14205 PF06426 Serine acetyltransferase, N-terminal JV59_RS14210 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JV59_RS14210 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JV59_RS14215 PF02556 Preprotein translocase subunit SecB JV59_RS14220 PF00581 Rhodanese-like domain JV59_RS14245 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF JV59_RS14255 PF06082 Exopolysaccharide biosynthesis protein YbjH JV59_RS14260 PF00152 tRNA synthetases class II (D, K and N) JV59_RS14265 PF02910 Fumarate reductase flavoprotein C-term JV59_RS14265 PF00890 FAD binding domain JV59_RS14270 PF13085 2Fe-2S iron-sulfur cluster binding domain JV59_RS14270 PF13183 4Fe-4S dicluster domain JV59_RS14275 PF02300 Fumarate reductase subunit C JV59_RS14280 PF02313 Fumarate reductase subunit D JV59_RS14290 PF07724 AAA domain (Cdc48 subfamily) JV59_RS14290 PF00004 ATPase family associated with various cellular activities (AAA) JV59_RS14295 PF00227 Proteasome subunit JV59_RS14300 PF05036 Sporulation related domain JV59_RS14305 PF00356 Bacterial regulatory proteins, lacI family JV59_RS14310 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JV59_RS14310 PF18074 Primosomal protein N C-terminal domain JV59_RS14310 PF17764 3′ DNA-binding domain (3′BD) JV59_RS14310 PF00271 Helicase conserved C-terminal domain JV59_RS14310 PF00270 DEAD/DEAH box helicase JV59_RS14315 PF01197 Ribosomal protein L31 JV59_RS14320 PF03949 Malic enzyme, NAD binding domain JV59_RS14320 PF00390 Malic enzyme, N-terminal domain JV59_RS14325 PF01340 Met Apo-repressor, MetJ JV59_RS14330 PF01053 Cys/Met metabolism PLP-dependent enzyme JV59_RS14335 PF00742 Homoserine dehydrogenase JV59_RS14335 PF00696 Amino acid kinase family JV59_RS14335 PF03447 Homoserine dehydrogenase, NAD binding domain JV59_RS14340 PF02219 Methylenetetrahydrofolate reductase JV59_RS14345 PF06005 Cell division protein ZapB JV59_RS14350 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JV59_RS14365 PF00118 TCP-1/cpn60 chaperonin family JV59_RS14370 PF00166 Chaperonin 10 Kd subunit JV59_RS14390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JV59_RS14390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JV59_RS14390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JV59_RS14390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JV59_RS14400 PF01565 FAD binding domain JV59_RS14400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JV59_RS14405 PF03099 Biotin/lipoate A/B protein ligase family JV59_RS14405 PF08279 HTH domain JV59_RS14405 PF02237 Biotin protein ligase C terminal domain JV59_RS14410 PF13091 PLD-like domain JV59_RS14415 PF00953 Glycosyl transferase family 4 JV59_RS14430 PF00534 Glycosyl transferases group 1 JV59_RS14460 PF13649 Methyltransferase domain JV59_RS14470 PF16254 Domain of unknown function (DUF4910) JV59_RS14470 PF09940 Domain of unknown function (DUF2172) JV59_RS14470 PF16221 winged helix-turn-helix JV59_RS14485 PF04199 Putative cyclase JV59_RS14495 PF13193 AMP-binding enzyme C-terminal domain JV59_RS14495 PF00501 AMP-binding enzyme JV59_RS14500 PF07836 DmpG-like communication domain JV59_RS14500 PF00682 HMGL-like JV59_RS14505 PF08666 SAF domain JV59_RS14505 PF03102 NeuB family JV59_RS14515 PF00202 Aminotransferase class-III JV59_RS14520 PF02348 Cytidylyltransferase JV59_RS14530 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JV59_RS14535 PF02719 Polysaccharide biosynthesis protein JV59_RS14540 PF01370 NAD dependent epimerase/dehydratase family JV59_RS14545 PF00534 Glycosyl transferases group 1 JV59_RS14545 PF13439 Glycosyltransferase Family 4 JV59_RS14560 PF00132 Bacterial transferase hexapeptide (six repeats) JV59_RS14560 PF14602 Hexapeptide repeat of succinyl-transferase JV59_RS14560 PF12464 Maltose acetyltransferase JV59_RS14575 PF04488 Glycosyltransferase sugar-binding region containing DXD motif JV59_RS14580 PF00534 Glycosyl transferases group 1 JV59_RS14580 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JV59_RS14600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JV59_RS14605 PF00535 Glycosyl transferase family 2 JV59_RS14615 PF01467 Cytidylyltransferase-like JV59_RS14620 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JV59_RS14620 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JV59_RS14620 PF06827 Zinc finger found in FPG and IleRS JV59_RS14630 PF00471 Ribosomal protein L33 JV59_RS14635 PF00830 Ribosomal L28 family JV59_RS14640 PF04002 RadC-like JAB domain JV59_RS14645 PF04127 DNA / pantothenate metabolism flavoprotein JV59_RS14645 PF02441 Flavoprotein JV59_RS14650 PF00440 Bacterial regulatory proteins, tetR family JV59_RS14655 PF03279 Bacterial lipid A biosynthesis acyltransferase JV59_RS14660 PF03279 Bacterial lipid A biosynthesis acyltransferase JV59_RS14665 PF00156 Phosphoribosyl transferase domain JV59_RS14670 PF01138 3' exoribonuclease family, domain 1 JV59_RS14670 PF03725 3' exoribonuclease family, domain 2 JV59_RS14675 PF08340 Domain of unknown function (DUF1732) JV59_RS14675 PF03755 YicC-like family, N-terminal region JV59_RS14690 PF14436 Bacterial EndoU nuclease JV59_RS14690 PF13332 Hemagglutinin repeat JV59_RS14690 PF05860 haemagglutination activity domain JV59_RS14690 PF04829 Pre-toxin domain with VENN motif JV59_RS14690 PF05594 Haemagluttinin repeat JV59_RS14695 PF05860 haemagglutination activity domain JV59_RS14695 PF15526 Novel toxin 21 JV59_RS14695 PF04829 Pre-toxin domain with VENN motif JV59_RS14695 PF05594 Haemagluttinin repeat JV59_RS14695 PF13332 Hemagglutinin repeat JV59_RS14700 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JV59_RS14700 PF17287 POTRA domain JV59_RS14700 PF08479 POTRA domain, ShlB-type JV59_RS14705 PF00860 Permease family JV59_RS14715 PF02472 Biopolymer transport protein ExbD/TolR JV59_RS14720 PF01618 MotA/TolQ/ExbB proton channel family JV59_RS14735 PF07715 TonB-dependent Receptor Plug Domain JV59_RS14735 PF00593 TonB dependent receptor JV59_RS14745 PF08281 Sigma-70, region 4 JV59_RS14745 PF04542 Sigma-70 region 2 JV59_RS14750 PF00625 Guanylate kinase JV59_RS14755 PF01192 RNA polymerase Rpb6 JV59_RS14760 PF02824 TGS domain JV59_RS14760 PF04607 Region found in RelA / SpoT proteins JV59_RS14760 PF13291 ACT domain JV59_RS14765 PF00588 SpoU rRNA Methylase family JV59_RS14765 PF12105 SpoU, rRNA methylase, C-terminal JV59_RS14770 PF17191 RecG wedge domain JV59_RS14770 PF00270 DEAD/DEAH box helicase JV59_RS14770 PF00271 Helicase conserved C-terminal domain JV59_RS14775 PF00459 Inositol monophosphatase family JV59_RS14780 PF00293 NUDIX domain JV59_RS14785 PF01521 Iron-sulphur cluster biosynthesis JV59_RS14785 PF01106 NifU-like domain JV59_RS14790 PF00156 Phosphoribosyl transferase domain JV59_RS14795 PF00561 alpha/beta hydrolase fold JV59_RS14805 PF17674 HHH domain JV59_RS14805 PF00575 S1 RNA binding domain JV59_RS14805 PF09371 Tex-like protein N-terminal domain JV59_RS14805 PF16921 Tex protein YqgF-like domain JV59_RS14815 PF01272 Transcription elongation factor, GreA/GreB, C-term JV59_RS14815 PF03449 Transcription elongation factor, N-terminal JV59_RS14820 PF00486 Transcriptional regulatory protein, C terminal JV59_RS14820 PF00072 Response regulator receiver domain JV59_RS14825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS14825 PF00672 HAMP domain JV59_RS14825 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS14835 PF04612 Type II secretion system (T2SS), protein M JV59_RS14840 PF12693 GspL periplasmic domain JV59_RS14840 PF05134 Type II secretion system (T2SS), protein L JV59_RS14845 PF03934 Type II secretion system (T2SS), protein K JV59_RS14850 PF07963 Prokaryotic N-terminal methylation motif JV59_RS14850 PF11612 Type II secretion system (T2SS), protein J JV59_RS14855 PF02501 Type II secretion system (T2SS), protein I JV59_RS14855 PF07963 Prokaryotic N-terminal methylation motif JV59_RS14860 PF12019 Type II transport protein GspH JV59_RS14865 PF08334 Type II secretion system (T2SS), protein G JV59_RS14865 PF07963 Prokaryotic N-terminal methylation motif JV59_RS14870 PF00482 Type II secretion system (T2SS), protein F JV59_RS14875 PF00437 Type II/IV secretion system protein JV59_RS14880 PF03958 Bacterial type II/III secretion system short domain JV59_RS14880 PF00263 Bacterial type II and III secretion system protein JV59_RS14885 PF11356 Type II secretion system protein C JV59_RS14890 PF01479 S4 domain JV59_RS14895 PF01430 Hsp33 protein JV59_RS14900 PF01293 Phosphoenolpyruvate carboxykinase JV59_RS14910 PF09500 Putative thioesterase (yiiD_Cterm) JV59_RS14910 PF00583 Acetyltransferase (GNAT) family JV59_RS14915 PF02580 D-Tyr-tRNA(Tyr) deacylase JV59_RS14920 PF03631 Virulence factor BrkB JV59_RS14930 PF00009 Elongation factor Tu GTP binding domain JV59_RS14930 PF00679 Elongation factor G C-terminus JV59_RS14930 PF03144 Elongation factor Tu domain 2 JV59_RS14935 PF03951 Glutamine synthetase, beta-Grasp domain JV59_RS14935 PF00120 Glutamine synthetase, catalytic domain JV59_RS14940 PF00512 His Kinase A (phospho-acceptor) domain JV59_RS14940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS14940 PF00989 PAS fold JV59_RS14945 PF00072 Response regulator receiver domain JV59_RS14945 PF00158 Sigma-54 interaction domain JV59_RS14945 PF02954 Bacterial regulatory protein, Fis family JV59_RS14950 PF03707 Bacterial signalling protein N terminal repeat JV59_RS14950 PF13188 PAS domain JV59_RS14950 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS14950 PF00563 EAL domain JV59_RS14955 PF00962 Adenosine/AMP deaminase JV59_RS14995 PF00132 Bacterial transferase hexapeptide (six repeats) JV59_RS15000 PF07369 Protein of unknown function (DUF1488) JV59_RS15005 PF08501 Shikimate dehydrogenase substrate binding domain JV59_RS15005 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JV59_RS15005 PF01488 Shikimate / quinate 5-dehydrogenase JV59_RS15010 PF01218 Coproporphyrinogen III oxidase JV59_RS15015 PF01300 Telomere recombination JV59_RS15020 PF00731 AIR carboxylase JV59_RS15025 PF02222 ATP-grasp domain JV59_RS15025 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JV59_RS15030 PF01396 Topoisomerase DNA binding C4 zinc finger JV59_RS15035 PF04361 Protein of unknown function (DUF494) JV59_RS15040 PF17782 DprA winged helix domain JV59_RS15040 PF02481 DNA recombination-mediator protein A JV59_RS15045 PF01327 Polypeptide deformylase JV59_RS15050 PF00551 Formyl transferase JV59_RS15050 PF02911 Formyl transferase, C-terminal domain JV59_RS15055 PF01029 NusB family JV59_RS15055 PF01189 16S rRNA methyltransferase RsmB/F JV59_RS15060 PF02080 TrkA-C domain JV59_RS15060 PF02254 TrkA-N domain JV59_RS15065 PF02386 Cation transport protein JV59_RS15075 PF03006 Haemolysin-III related JV59_RS15080 PF07070 SpoOM protein JV59_RS15090 PF06288 Protein of unknown function (DUF1040) JV59_RS15095 PF13746 4Fe-4S dicluster domain JV59_RS15095 PF12801 4Fe-4S binding domain JV59_RS15095 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JV59_RS15100 PF01636 Phosphotransferase enzyme family JV59_RS15105 PF01323 DSBA-like thioredoxin domain JV59_RS15110 PF01553 Acyltransferase JV59_RS15120 PF01078 Magnesium chelatase, subunit ChlI JV59_RS15120 PF13335 Magnesium chelatase, subunit ChlI C-terminal JV59_RS15125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JV59_RS15125 PF00205 Thiamine pyrophosphate enzyme, central domain JV59_RS15125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JV59_RS15135 PF01063 Amino-transferase class IV JV59_RS15140 PF00920 Dehydratase family JV59_RS15145 PF00291 Pyridoxal-phosphate dependent enzyme JV59_RS15145 PF00585 C-terminal regulatory domain of Threonine dehydratase JV59_RS15150 PF00107 Zinc-binding dehydrogenase JV59_RS15150 PF08240 Alcohol dehydrogenase GroES-like domain JV59_RS15155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS15155 PF03466 LysR substrate binding domain JV59_RS15165 PF01206 Sulfurtransferase TusA JV59_RS15175 PF01169 Uncharacterized protein family UPF0016 JV59_RS15180 PF02091 Glycyl-tRNA synthetase alpha subunit JV59_RS15185 PF05746 DALR anticodon binding domain JV59_RS15185 PF02092 Glycyl-tRNA synthetase beta subunit JV59_RS15190 PF00155 Aminotransferase class I and II JV59_RS15195 PF00011 Hsp20/alpha crystallin family JV59_RS15200 PF01751 Toprim domain JV59_RS15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS15200 PF18053 DNA gyrase B subunit insert domain JV59_RS15200 PF00986 DNA gyrase B subunit, carboxyl terminus JV59_RS15200 PF00204 DNA gyrase B JV59_RS15205 PF02463 RecF/RecN/SMC N terminal domain JV59_RS15210 PF02767 DNA polymerase III beta subunit, central domain JV59_RS15210 PF00712 DNA polymerase III beta subunit, N-terminal domain JV59_RS15210 PF02768 DNA polymerase III beta subunit, C-terminal domain JV59_RS15215 PF08299 Bacterial dnaA protein helix-turn-helix JV59_RS15215 PF00308 Bacterial dnaA protein JV59_RS15215 PF11638 DnaA N-terminal domain JV59_RS15220 PF00497 Bacterial extracellular solute-binding proteins, family 3 JV59_RS15225 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS15230 PF00005 ABC transporter JV59_RS15235 PF00468 Ribosomal protein L34 JV59_RS15240 PF00825 Ribonuclease P JV59_RS15245 PF02096 60Kd inner membrane protein JV59_RS15245 PF14849 YidC periplasmic domain JV59_RS15250 PF01926 50S ribosome-binding GTPase JV59_RS15250 PF10396 GTP-binding protein TrmE N-terminus JV59_RS15250 PF12631 MnmE helical domain JV59_RS15255 PF00258 Flavodoxin JV59_RS15260 PF01134 Glucose inhibited division protein A JV59_RS15260 PF13932 GidA associated domain JV59_RS15265 PF02527 rRNA small subunit methyltransferase G JV59_RS15270 PF13614 AAA domain JV59_RS15275 PF17762 HTH domain found in ParB protein JV59_RS15275 PF02195 ParB-like nuclease domain JV59_RS15280 PF03899 ATP synthase I chain JV59_RS15285 PF00119 ATP synthase A chain JV59_RS15290 PF00137 ATP synthase subunit C JV59_RS15295 PF00430 ATP synthase B/B' CF(0) JV59_RS15300 PF00213 ATP synthase delta (OSCP) subunit JV59_RS15305 PF00306 ATP synthase alpha/beta chain, C terminal domain JV59_RS15305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JV59_RS15305 PF02874 ATP synthase alpha/beta family, beta-barrel domain JV59_RS15310 PF00231 ATP synthase JV59_RS15315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JV59_RS15315 PF02874 ATP synthase alpha/beta family, beta-barrel domain JV59_RS15320 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JV59_RS15320 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JV59_RS15325 PF00132 Bacterial transferase hexapeptide (six repeats) JV59_RS15325 PF12804 MobA-like NTP transferase domain JV59_RS15330 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS15335 PF00497 Bacterial extracellular solute-binding proteins, family 3 JV59_RS15340 PF07690 Major Facilitator Superfamily JV59_RS15345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS15345 PF03466 LysR substrate binding domain JV59_RS15350 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS15355 PF00108 Thiolase, N-terminal domain JV59_RS15355 PF02803 Thiolase, C-terminal domain JV59_RS15360 PF00378 Enoyl-CoA hydratase/isomerase JV59_RS15360 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JV59_RS15360 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JV59_RS15365 PF09186 Domain of unknown function (DUF1949) JV59_RS15365 PF01205 Uncharacterized protein family UPF0029 JV59_RS15370 PF02386 Cation transport protein JV59_RS15375 PF12724 Flavodoxin domain JV59_RS15425 PF07731 Multicopper oxidase JV59_RS15425 PF00394 Multicopper oxidase JV59_RS15425 PF07732 Multicopper oxidase JV59_RS15430 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JV59_RS15435 PF01964 Radical SAM ThiC family JV59_RS15435 PF13667 ThiC-associated domain JV59_RS15440 PF02581 Thiamine monophosphate synthase JV59_RS15445 PF00899 ThiF family JV59_RS15460 PF06968 Biotin and Thiamin Synthesis associated domain JV59_RS15460 PF04055 Radical SAM superfamily JV59_RS15465 PF01321 Creatinase/Prolidase N-terminal domain JV59_RS15465 PF00557 Metallopeptidase family M24 JV59_RS15465 PF00557 Metallopeptidase family M24 JV59_RS15465 PF01321 Creatinase/Prolidase N-terminal domain JV59_RS15470 PF03466 LysR substrate binding domain JV59_RS15470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS15475 PF07690 Major Facilitator Superfamily JV59_RS15485 PF01037 Lrp/AsnC ligand binding domain JV59_RS15490 PF08448 PAS fold JV59_RS15490 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS15490 PF00563 EAL domain JV59_RS15495 PF04445 Putative SAM-dependent methyltransferase JV59_RS15505 PF00892 EamA-like transporter family JV59_RS15510 PF00582 Universal stress protein family JV59_RS15515 PF00210 Ferritin-like domain JV59_RS15520 PF10625 Universal stress protein B (UspB) JV59_RS15530 PF03440 Aerolysin/Pertussis toxin (APT) domain JV59_RS15530 PF01117 Aerolysin toxin JV59_RS15550 PF12833 Helix-turn-helix domain JV59_RS15550 PF12852 Cupin JV59_RS15555 PF08668 HDOD domain JV59_RS15565 PF02646 RmuC family JV59_RS15570 PF01209 ubiE/COQ5 methyltransferase family JV59_RS15575 PF02036 SCP-2 sterol transfer family JV59_RS15580 PF03109 ABC1 family JV59_RS15585 PF02416 mttA/Hcf106 family JV59_RS15590 PF02416 mttA/Hcf106 family JV59_RS15595 PF00902 Sec-independent protein translocase protein (TatC) JV59_RS15600 PF01026 TatD related DNase JV59_RS15605 PF00490 Delta-aminolevulinic acid dehydratase JV59_RS15615 PF01612 3'-5' exonuclease JV59_RS15615 PF00476 DNA polymerase family A JV59_RS15615 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JV59_RS15615 PF01367 5'-3' exonuclease, C-terminal SAM fold JV59_RS15620 PF01926 50S ribosome-binding GTPase JV59_RS15625 PF00034 Cytochrome c JV59_RS15635 PF04220 Der GTPase activator (YihI) JV59_RS15645 PF04055 Radical SAM superfamily JV59_RS15645 PF06969 HemN C-terminal domain JV59_RS15650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JV59_RS15650 PF03466 LysR substrate binding domain JV59_RS15655 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JV59_RS15655 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JV59_RS15660 PF04380 Membrane fusogenic activity JV59_RS15665 PF00873 AcrB/AcrD/AcrF family JV59_RS15670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JV59_RS15675 PF00440 Bacterial regulatory proteins, tetR family JV59_RS15680 PF13361 UvrD-like helicase C-terminal domain JV59_RS15680 PF00580 UvrD/REP helicase N-terminal domain JV59_RS15685 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JV59_RS15715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JV59_RS15715 PF00005 ABC transporter JV59_RS15720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JV59_RS15725 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS15730 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS15730 PF12911 N-terminal TM domain of oligopeptide transport permease C JV59_RS15745 PF00072 Response regulator receiver domain JV59_RS15745 PF00486 Transcriptional regulatory protein, C terminal JV59_RS15770 PF00083 Sugar (and other) transporter JV59_RS15780 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS15780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JV59_RS15785 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JV59_RS15805 PF05114 Protein of unknown function (DUF692) JV59_RS15815 PF13361 UvrD-like helicase C-terminal domain JV59_RS15815 PF00580 UvrD/REP helicase N-terminal domain JV59_RS15825 PF08534 Redoxin JV59_RS15835 PF01810 LysE type translocator JV59_RS15845 PF00892 EamA-like transporter family JV59_RS15850 PF09382 RQC domain JV59_RS15850 PF16124 RecQ zinc-binding JV59_RS15850 PF00570 HRDC domain JV59_RS15850 PF00271 Helicase conserved C-terminal domain JV59_RS15850 PF00270 DEAD/DEAH box helicase JV59_RS15860 PF02592 Putative vitamin uptake transporter JV59_RS15865 PF02541 Ppx/GppA phosphatase family JV59_RS15870 PF00271 Helicase conserved C-terminal domain JV59_RS15870 PF00270 DEAD/DEAH box helicase JV59_RS15875 PF00085 Thioredoxin JV59_RS15880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JV59_RS15880 PF07498 Rho termination factor, N-terminal domain JV59_RS15880 PF07497 Rho termination factor, RNA-binding domain JV59_RS15890 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JV59_RS15895 PF00970 Oxidoreductase FAD-binding domain JV59_RS15895 PF00175 Oxidoreductase NAD-binding domain JV59_RS15895 PF00111 2Fe-2S iron-sulfur cluster binding domain JV59_RS15900 PF00175 Oxidoreductase NAD-binding domain JV59_RS15925 PF07219 HemY protein N-terminus JV59_RS15930 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JV59_RS15935 PF02602 Uroporphyrinogen-III synthase HemD JV59_RS15940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JV59_RS15940 PF03900 Porphobilinogen deaminase, C-terminal domain JV59_RS15945 PF01295 Adenylate cyclase, class-I JV59_RS15945 PF12633 Adenylate cyclase NT domain JV59_RS15950 PF01491 Frataxin-like domain JV59_RS15960 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JV59_RS15960 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JV59_RS15965 PF01678 Diaminopimelate epimerase JV59_RS15975 PF02899 Phage integrase, N-terminal SAM-like domain JV59_RS15975 PF00589 Phage integrase family JV59_RS15980 PF13419 Haloacid dehalogenase-like hydrolase JV59_RS15985 PF08495 FIST N domain JV59_RS15985 PF00563 EAL domain JV59_RS15985 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS15985 PF10442 FIST C domain JV59_RS15990 PF03942 DTW domain JV59_RS16015 PF01810 LysE type translocator JV59_RS16020 PF00563 EAL domain JV59_RS16020 PF08668 HDOD domain JV59_RS16025 PF01022 Bacterial regulatory protein, arsR family JV59_RS16030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JV59_RS16030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JV59_RS16075 PF01914 MarC family integral membrane protein JV59_RS16090 PF02881 SRP54-type protein, helical bundle domain JV59_RS16090 PF00448 SRP54-type protein, GTPase domain JV59_RS16095 PF00005 ABC transporter JV59_RS16100 PF18075 FtsX extracellular domain JV59_RS16105 PF00140 Sigma-70 factor, region 1.2 JV59_RS16105 PF04545 Sigma-70, region 4 JV59_RS16105 PF04542 Sigma-70 region 2 JV59_RS16110 PF00581 Rhodanese-like domain JV59_RS16115 PF01694 Rhomboid family JV59_RS16115 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JV59_RS16120 PF03748 Flagellar basal body-associated protein FliL JV59_RS16125 PF04345 Chorismate lyase JV59_RS16130 PF01040 UbiA prenyltransferase family JV59_RS16135 PF01553 Acyltransferase JV59_RS16140 PF01219 Prokaryotic diacylglycerol kinase JV59_RS16145 PF01726 LexA DNA binding domain JV59_RS16145 PF00717 Peptidase S24-like JV59_RS16155 PF01554 MatE JV59_RS16160 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS16160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JV59_RS16165 PF00440 Bacterial regulatory proteins, tetR family JV59_RS16175 PF05958 tRNA (Uracil-5-)-methyltransferase JV59_RS16180 PF07715 TonB-dependent Receptor Plug Domain JV59_RS16180 PF00593 TonB dependent receptor JV59_RS16190 PF01177 Asp/Glu/Hydantoin racemase JV59_RS16530 PF08676 MutL C terminal dimerisation domain JV59_RS16530 PF01119 DNA mismatch repair protein, C-terminal domain JV59_RS16605 PF00772 DnaB-like helicase N terminal domain JV59_RS16605 PF03796 DnaB-like helicase C terminal domain JV59_RS16750 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS16750 PF17157 Gammaproteobacterial periplasmic sensor domain JV59_RS16750 PF00563 EAL domain JV59_RS16915 PF04055 Radical SAM superfamily JV59_RS16915 PF06969 HemN C-terminal domain JV59_RS17350 PF01746 tRNA (Guanine-1)-methyltransferase JV59_RS17565 PF00330 Aconitase family (aconitate hydratase) JV59_RS17565 PF06434 Aconitate hydratase 2 N-terminus JV59_RS17565 PF11791 Aconitate B N-terminal domain JV59_RS17665 PF00072 Response regulator receiver domain JV59_RS17665 PF00486 Transcriptional regulatory protein, C terminal JV59_RS17780 PF03707 Bacterial signalling protein N terminal repeat JV59_RS17780 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS17780 PF00563 EAL domain JV59_RS17860 PF13184 NusA-like KH domain JV59_RS17860 PF08529 NusA N-terminal domain JV59_RS17860 PF00575 S1 RNA binding domain JV59_RS17870 PF04760 Translation initiation factor IF-2, N-terminal region JV59_RS17870 PF11987 Translation-initiation factor 2 JV59_RS17870 PF00009 Elongation factor Tu GTP binding domain JV59_RS17870 PF08364 Bacterial translation initiation factor IF-2 associated region JV59_RS17935 PF04898 Glutamate synthase central domain JV59_RS17935 PF01645 Conserved region in glutamate synthase JV59_RS17935 PF01493 GXGXG motif JV59_RS17935 PF00310 Glutamine amidotransferases class-II JV59_RS18050 PF00033 Cytochrome b/b6/petB JV59_RS18050 PF00032 Cytochrome b(C-terminal)/b6/petD JV59_RS18125 PF02875 Mur ligase family, glutamate ligase domain JV59_RS18125 PF01225 Mur ligase family, catalytic domain JV59_RS18125 PF08245 Mur ligase middle domain JV59_RS18130 PF03799 Cell division protein FtsQ JV59_RS18130 PF08478 POTRA domain, FtsQ-type JV59_RS18380 PF04205 FMN-binding domain JV59_RS18415 PF00271 Helicase conserved C-terminal domain JV59_RS18415 PF16124 RecQ zinc-binding JV59_RS18415 PF00270 DEAD/DEAH box helicase JV59_RS18415 PF00570 HRDC domain JV59_RS18415 PF09382 RQC domain JV59_RS18900 PF05524 PEP-utilising enzyme, N-terminal JV59_RS18900 PF02896 PEP-utilising enzyme, TIM barrel domain JV59_RS18900 PF00391 PEP-utilising enzyme, mobile domain JV59_RS19595 PF01048 Phosphorylase superfamily JV59_RS19805 PF01914 MarC family integral membrane protein JV59_RS20090 PF00384 Molybdopterin oxidoreductase JV59_RS20090 PF18364 Molybdopterin oxidoreductase N-terminal domain JV59_RS20090 PF01568 Molydopterin dinucleotide binding domain JV59_RS20635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JV59_RS20635 PF00072 Response regulator receiver domain JV59_RS20680 PF01541 GIY-YIG catalytic domain JV59_RS20680 PF02151 UvrB/uvrC motif JV59_RS20680 PF08459 UvrC Helix-hairpin-helix N-terminal JV59_RS21040 PF02470 MlaD protein JV59_RS21055 PF00108 Thiolase, N-terminal domain JV59_RS21055 PF02803 Thiolase, C-terminal domain JV59_RS22130 PF00501 AMP-binding enzyme JV59_RS22130 PF13193 AMP-binding enzyme C-terminal domain JV59_RS22130 PF00668 Condensation domain JV59_RS22130 PF00975 Thioesterase domain JV59_RS22130 PF00550 Phosphopantetheine attachment site JV59_RS22160 PF00501 AMP-binding enzyme JV59_RS22160 PF13193 AMP-binding enzyme C-terminal domain JV59_RS22160 PF00668 Condensation domain JV59_RS22160 PF00550 Phosphopantetheine attachment site JV59_RS22255 PF00158 Sigma-54 interaction domain JV59_RS22255 PF00072 Response regulator receiver domain JV59_RS22255 PF02954 Bacterial regulatory protein, Fis family JV59_RS22330 PF03942 DTW domain JV59_RS22375 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JV59_RS22465 PF00873 AcrB/AcrD/AcrF family JV59_RS22575 PF00403 Heavy-metal-associated domain JV59_RS22635 PF01312 FlhB HrpN YscU SpaS Family JV59_RS23060 PF05088 Bacterial NAD-glutamate dehydrogenase JV59_RS23065 PF05088 Bacterial NAD-glutamate dehydrogenase JV59_RS23075 PF11940 Domain of unknown function (DUF3458) Ig-like fold JV59_RS23075 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JV59_RS23075 PF01433 Peptidase family M1 domain JV59_RS23080 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JV59_RS23080 PF01433 Peptidase family M1 domain JV59_RS23080 PF11940 Domain of unknown function (DUF3458) Ig-like fold JV59_RS23200 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS23210 PF00528 Binding-protein-dependent transport system inner membrane component JV59_RS23385 PF00694 Aconitase C-terminal domain JV59_RS23385 PF00330 Aconitase family (aconitate hydratase) JV59_RS23965 PF05724 Thiopurine S-methyltransferase (TPMT) JV59_RS24550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JV59_RS24550 PF07992 Pyridine nucleotide-disulphide oxidoreductase JV59_RS24890 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JV59_RS24890 PF01676 Metalloenzyme superfamily JV59_RS24895 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JV59_RS24895 PF01676 Metalloenzyme superfamily JV59_RS24920 PF02743 Cache domain JV59_RS24920 PF00672 HAMP domain JV59_RS24920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JV59_RS25090 PF01523 Putative modulator of DNA gyrase JV59_RS25275 PF10150 Ribonuclease E/G family JV59_RS25275 PF00575 S1 RNA binding domain JV59_RS25280 PF00575 S1 RNA binding domain JV59_RS25280 PF10150 Ribonuclease E/G family JV59_RS25600 PF00226 DnaJ domain JV59_RS25600 PF05099 Tellurite resistance protein TerB JV59_RS25680 PF02660 Glycerol-3-phosphate acyltransferase JV59_RS25790 PF07729 FCD domain JV59_RS25790 PF00392 Bacterial regulatory proteins, gntR family JV59_RS25880 PF00905 Penicillin binding protein transpeptidase domain JV59_RS25880 PF00912 Transglycosylase JV59_RS25880 PF14814 Bifunctional transglycosylase second domain JV59_RS25910 PF11791 Aconitate B N-terminal domain JV59_RS25910 PF06434 Aconitate hydratase 2 N-terminus JV59_RS25910 PF00330 Aconitase family (aconitate hydratase) JV59_RS26070 PF00873 AcrB/AcrD/AcrF family JV59_RS26105 PF13609 Gram-negative porin JV59_RS26140 PF00563 EAL domain JV59_RS26140 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS26140 PF03707 Bacterial signalling protein N terminal repeat JV59_RS26185 PF01336 OB-fold nucleic acid binding domain JV59_RS26185 PF00152 tRNA synthetases class II (D, K and N) JV59_RS26205 PF00563 EAL domain JV59_RS26205 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS26215 PF02036 SCP-2 sterol transfer family JV59_RS26245 PF04760 Translation initiation factor IF-2, N-terminal region JV59_RS26245 PF08364 Bacterial translation initiation factor IF-2 associated region JV59_RS26245 PF11987 Translation-initiation factor 2 JV59_RS26245 PF00009 Elongation factor Tu GTP binding domain JV59_RS26280 PF17151 Periplasmic sensor domain JV59_RS26280 PF00990 Diguanylate cyclase, GGDEF domain JV59_RS26285 PF00440 Bacterial regulatory proteins, tetR family JV59_RS26295 PF11047 Salmonella outer protein D JV59_RS26355 PF02384 N-6 DNA Methylase JV59_RS26355 PF12161 HsdM N-terminal domain JV59_RS26415 PF14748 Pyrroline-5-carboxylate reductase dimerisation JV59_RS26415 PF03807 NADP oxidoreductase coenzyme F420-dependent