locus-tag class description BA953_RS00010 PF00672 HAMP domain BA953_RS00010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS00010 PF02743 Cache domain BA953_RS00015 PF11230 Protein of unknown function (DUF3029) BA953_RS00020 PF04055 Radical SAM superfamily BA953_RS00050 PF01259 SAICAR synthetase BA953_RS00065 PF00753 Metallo-beta-lactamase superfamily BA953_RS00070 PF00072 Response regulator receiver domain BA953_RS00070 PF00486 Transcriptional regulatory protein, C terminal BA953_RS00075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS00075 PF00672 HAMP domain BA953_RS00075 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS00075 PF16527 Two-component sensor protein CpxA, periplasmic domain BA953_RS00080 PF07715 TonB-dependent Receptor Plug Domain BA953_RS00080 PF00593 TonB dependent receptor BA953_RS00090 PF01618 MotA/TolQ/ExbB proton channel family BA953_RS00095 PF01618 MotA/TolQ/ExbB proton channel family BA953_RS00100 PF02472 Biopolymer transport protein ExbD/TolR BA953_RS00105 PF03544 Gram-negative bacterial TonB protein C-terminal BA953_RS00120 PF17203 Single cache domain 3 BA953_RS00120 PF00989 PAS fold BA953_RS00120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS00120 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BA953_RS00125 PF00072 Response regulator receiver domain BA953_RS00125 PF12431 Transcriptional regulator BA953_RS00145 PF08448 PAS fold BA953_RS00145 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS00150 PF08447 PAS fold BA953_RS00150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS00155 PF04324 BFD-like [2Fe-2S] binding domain BA953_RS00155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BA953_RS00155 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS00155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BA953_RS00155 PF18267 Rubredoxin NAD+ reductase C-terminal domain BA953_RS00160 PF13806 Rieske-like [2Fe-2S] domain BA953_RS00165 PF01226 Formate/nitrite transporter BA953_RS00170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA953_RS00170 PF14824 Sirohaem biosynthesis protein central BA953_RS00170 PF10414 Sirohaem synthase dimerisation region BA953_RS00185 PF00174 Oxidoreductase molybdopterin binding domain BA953_RS00190 PF01794 Ferric reductase like transmembrane component BA953_RS00200 PF01278 Omptin family BA953_RS00205 PF03466 LysR substrate binding domain BA953_RS00205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS00215 PF00072 Response regulator receiver domain BA953_RS00215 PF00486 Transcriptional regulatory protein, C terminal BA953_RS00220 PF00672 HAMP domain BA953_RS00220 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS00220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS00225 PF06629 MltA-interacting protein MipA BA953_RS00230 PF04393 Protein of unknown function (DUF535) BA953_RS00235 PF00392 Bacterial regulatory proteins, gntR family BA953_RS00235 PF07729 FCD domain BA953_RS00240 PF07687 Peptidase dimerisation domain BA953_RS00240 PF01546 Peptidase family M20/M25/M40 BA953_RS00245 PF03606 C4-dicarboxylate anaerobic carrier BA953_RS00255 PF07690 Major Facilitator Superfamily BA953_RS00260 PF03466 LysR substrate binding domain BA953_RS00260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS00265 PF17853 GGDEF-like domain BA953_RS00265 PF05651 Putative sugar diacid recognition BA953_RS00265 PF13556 PucR C-terminal helix-turn-helix domain BA953_RS00270 PF02595 Glycerate kinase family BA953_RS00275 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BA953_RS00275 PF01648 4'-phosphopantetheinyl transferase superfamily BA953_RS00280 PF00005 ABC transporter BA953_RS00285 PF01497 Periplasmic binding protein BA953_RS00290 PF01032 FecCD transport family BA953_RS00295 PF00005 ABC transporter BA953_RS00300 PF03621 MbtH-like protein BA953_RS00305 PF00668 Condensation domain BA953_RS00305 PF00501 AMP-binding enzyme BA953_RS00305 PF00550 Phosphopantetheine attachment site BA953_RS00305 PF13193 AMP-binding enzyme C-terminal domain BA953_RS00310 PF00550 Phosphopantetheine attachment site BA953_RS00310 PF00668 Condensation domain BA953_RS00310 PF13193 AMP-binding enzyme C-terminal domain BA953_RS00310 PF00501 AMP-binding enzyme BA953_RS00315 PF00593 TonB dependent receptor BA953_RS00315 PF07715 TonB-dependent Receptor Plug Domain BA953_RS00325 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BA953_RS00350 PF02397 Bacterial sugar transferase BA953_RS00360 PF13439 Glycosyltransferase Family 4 BA953_RS00360 PF00534 Glycosyl transferases group 1 BA953_RS00390 PF00862 Sucrose synthase BA953_RS00390 PF00534 Glycosyl transferases group 1 BA953_RS00395 PF00534 Glycosyl transferases group 1 BA953_RS00395 PF13439 Glycosyltransferase Family 4 BA953_RS00405 PF00158 Sigma-54 interaction domain BA953_RS00405 PF00072 Response regulator receiver domain BA953_RS00405 PF02954 Bacterial regulatory protein, Fis family BA953_RS00410 PF01627 Hpt domain BA953_RS00410 PF00072 Response regulator receiver domain BA953_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS00410 PF00672 HAMP domain BA953_RS00410 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS00410 PF17149 Periplasmic sensor domain found in signal transduction proteins BA953_RS00450 PF01554 MatE BA953_RS00455 PF00677 Lumazine binding domain BA953_RS00465 PF03881 Fructosamine kinase BA953_RS00475 PF00877 NlpC/P60 family BA953_RS00480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS00480 PF12729 Four helix bundle sensory module for signal transduction BA953_RS00480 PF00672 HAMP domain BA953_RS00490 PF03942 DTW domain BA953_RS00495 PF00480 ROK family BA953_RS00510 PF03453 MoeA N-terminal region (domain I and II) BA953_RS00510 PF03454 MoeA C-terminal region (domain IV) BA953_RS00510 PF00994 Probable molybdopterin binding domain BA953_RS00515 PF12804 MobA-like NTP transferase domain BA953_RS00520 PF08402 TOBE domain BA953_RS00520 PF00005 ABC transporter BA953_RS00525 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS00530 PF12849 PBP superfamily domain BA953_RS00535 PF02954 Bacterial regulatory protein, Fis family BA953_RS00535 PF00072 Response regulator receiver domain BA953_RS00535 PF00158 Sigma-54 interaction domain BA953_RS00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS00540 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS00540 PF00989 PAS fold BA953_RS00555 PF04542 Sigma-70 region 2 BA953_RS00555 PF08281 Sigma-70, region 4 BA953_RS00565 PF12848 ABC transporter BA953_RS00565 PF00005 ABC transporter BA953_RS00590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA953_RS00590 PF00529 HlyD membrane-fusion protein of T1SS BA953_RS00595 PF00873 AcrB/AcrD/AcrF family BA953_RS00600 PF00486 Transcriptional regulatory protein, C terminal BA953_RS00605 PF01645 Conserved region in glutamate synthase BA953_RS00625 PF03591 AzlC protein BA953_RS00630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS00630 PF03466 LysR substrate binding domain BA953_RS00635 PF01551 Peptidase family M23 BA953_RS00660 PF01292 Prokaryotic cytochrome b561 BA953_RS00665 PF02743 Cache domain BA953_RS00665 PF00672 HAMP domain BA953_RS00665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS00670 PF02634 FdhD/NarQ family BA953_RS00700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BA953_RS00700 PF00384 Molybdopterin oxidoreductase BA953_RS00700 PF01568 Molydopterin dinucleotide binding domain BA953_RS00705 PF13247 4Fe-4S dicluster domain BA953_RS00720 PF00909 Ammonium Transporter Family BA953_RS00725 PF02146 Sir2 family BA953_RS00730 PF17155 Gammaproteobacterial periplasmic sensor domain BA953_RS00730 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS00735 PF13416 Bacterial extracellular solute-binding protein BA953_RS00740 PF13416 Bacterial extracellular solute-binding protein BA953_RS00745 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS00750 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS00755 PF00005 ABC transporter BA953_RS00755 PF08402 TOBE domain BA953_RS00775 PF01171 PP-loop family BA953_RS00795 PF05638 Type VI secretion system effector, Hcp BA953_RS00815 PF04717 Type VI secretion system, phage-baseplate injector BA953_RS00860 PF14331 ImcF-related N-terminal domain BA953_RS00860 PF06744 Type VI secretion protein IcmF C-terminal BA953_RS00860 PF06761 Intracellular multiplication and human macrophage-killing BA953_RS00875 PF00582 Universal stress protein family BA953_RS00880 PF13545 Crp-like helix-turn-helix domain BA953_RS00880 PF00027 Cyclic nucleotide-binding domain BA953_RS00895 PF00403 Heavy-metal-associated domain BA953_RS00905 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP BA953_RS00905 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA953_RS00920 PF00115 Cytochrome C and Quinol oxidase polypeptide I BA953_RS00935 PF16458 Beta-prism lectin BA953_RS00935 PF07968 Leukocidin/Hemolysin toxin family BA953_RS00935 PF12563 Hemolytic toxin N terminal BA953_RS00940 PF00813 FliP family BA953_RS00945 PF01313 Bacterial export proteins, family 3 BA953_RS00950 PF01311 Bacterial export proteins, family 1 BA953_RS00955 PF01312 FlhB HrpN YscU SpaS Family BA953_RS00960 PF00196 Bacterial regulatory proteins, luxR family BA953_RS00960 PF00072 Response regulator receiver domain BA953_RS00970 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS00970 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BA953_RS00970 PF00072 Response regulator receiver domain BA953_RS00970 PF01627 Hpt domain BA953_RS00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS00970 PF00672 HAMP domain BA953_RS00980 PF03958 Bacterial type II/III secretion system short domain BA953_RS00980 PF00263 Bacterial type II and III secretion system protein BA953_RS01015 PF00005 ABC transporter BA953_RS01015 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA953_RS01020 PF00005 ABC transporter BA953_RS01025 PF08241 Methyltransferase domain BA953_RS01025 PF12697 Alpha/beta hydrolase family BA953_RS01045 PF04888 Secretion system effector C (SseC) like family BA953_RS01070 PF00664 ABC transporter transmembrane region BA953_RS01070 PF00005 ABC transporter BA953_RS01075 PF00529 HlyD membrane-fusion protein of T1SS BA953_RS01095 PF16123 Hydroxyacylglutathione hydrolase C-terminus BA953_RS01095 PF00753 Metallo-beta-lactamase superfamily BA953_RS01105 PF03466 LysR substrate binding domain BA953_RS01105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS01120 PF01361 Tautomerase enzyme BA953_RS01135 PF03594 Benzoate membrane transport protein BA953_RS01140 PF01381 Helix-turn-helix BA953_RS01140 PF07883 Cupin domain BA953_RS01150 PF03150 Di-haem cytochrome c peroxidase BA953_RS01150 PF00034 Cytochrome c BA953_RS01155 PF12833 Helix-turn-helix domain BA953_RS01175 PF01514 Secretory protein of YscJ/FliF family BA953_RS01195 PF05932 Tir chaperone protein (CesT) family BA953_RS01210 PF00771 FHIPEP family BA953_RS01215 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA953_RS01215 PF18269 T3SS EscN ATPase C-terminal domain BA953_RS01215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA953_RS01235 PF11047 Salmonella outer protein D BA953_RS01250 PF00652 Ricin-type beta-trefoil lectin domain BA953_RS01250 PF07968 Leukocidin/Hemolysin toxin family BA953_RS01265 PF01565 FAD binding domain BA953_RS01265 PF04030 D-arabinono-1,4-lactone oxidase BA953_RS01275 PF00672 HAMP domain BA953_RS01275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS01275 PF12729 Four helix bundle sensory module for signal transduction BA953_RS01280 PF01168 Alanine racemase, N-terminal domain BA953_RS01280 PF00842 Alanine racemase, C-terminal domain BA953_RS01435 PF13286 Phosphohydrolase-associated domain BA953_RS01435 PF01966 HD domain BA953_RS01455 PF13411 MerR HTH family regulatory protein BA953_RS01490 PF01810 LysE type translocator BA953_RS01510 PF06303 MatP N-terminal domain BA953_RS01510 PF17414 MatP C-terminal ribbon-helix-helix domain BA953_RS01515 PF05362 Lon protease (S16) C-terminal proteolytic domain BA953_RS01515 PF13654 AAA domain BA953_RS01520 PF07977 FabA-like domain BA953_RS01525 PF04957 Ribosome modulation factor BA953_RS01535 PF00005 ABC transporter BA953_RS01535 PF12848 ABC transporter BA953_RS01535 PF16326 ABC transporter C-terminal domain BA953_RS01545 PF01170 Putative RNA methylase family UPF0020 BA953_RS01545 PF02926 THUMP domain BA953_RS01545 PF10672 S-adenosylmethionine-dependent methyltransferase BA953_RS01550 PF07126 Cell-division protein ZapC BA953_RS01555 PF01180 Dihydroorotate dehydrogenase BA953_RS01560 PF05088 Bacterial NAD-glutamate dehydrogenase BA953_RS01570 PF01433 Peptidase family M1 domain BA953_RS01570 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BA953_RS01570 PF11940 Domain of unknown function (DUF3458) Ig-like fold BA953_RS01580 PF03572 Peptidase family S41 BA953_RS01580 PF17804 Tail specific protease N-terminal domain BA953_RS01580 PF11818 C-terminal domain of tail specific protease (DUF3340) BA953_RS01580 PF00595 PDZ domain BA953_RS01585 PF17516 ProQ C-terminal domain BA953_RS01585 PF04352 ProQ/FINO family BA953_RS01590 PF13185 GAF domain BA953_RS01595 PF00664 ABC transporter transmembrane region BA953_RS01595 PF00005 ABC transporter BA953_RS01600 PF04403 Paraquat-inducible protein A BA953_RS01610 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BA953_RS01610 PF01189 16S rRNA methyltransferase RsmB/F BA953_RS01610 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BA953_RS01630 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BA953_RS01630 PF02896 PEP-utilising enzyme, TIM barrel domain BA953_RS01630 PF00391 PEP-utilising enzyme, mobile domain BA953_RS01635 PF00793 DAHP synthetase I family BA953_RS01640 PF04461 Protein of unknown function (DUF520) BA953_RS01645 PF10414 Sirohaem synthase dimerisation region BA953_RS01645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA953_RS01645 PF14824 Sirohaem biosynthesis protein central BA953_RS01650 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA953_RS01655 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS01660 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS01665 PF00005 ABC transporter BA953_RS01670 PF01027 Inhibitor of apoptosis-promoting Bax1 BA953_RS01675 PF04358 DsrC like protein BA953_RS01680 PF00708 Acylphosphatase BA953_RS01685 PF02743 Cache domain BA953_RS01685 PF00672 HAMP domain BA953_RS01685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS01690 PF10672 S-adenosylmethionine-dependent methyltransferase BA953_RS01690 PF17785 PUA-like domain BA953_RS01705 PF05736 OprF membrane domain BA953_RS01705 PF00691 OmpA family BA953_RS01715 PF06508 Queuosine biosynthesis protein QueC BA953_RS01720 PF04055 Radical SAM superfamily BA953_RS01745 PF04303 PrpF protein BA953_RS01750 PF00330 Aconitase family (aconitate hydratase) BA953_RS01750 PF00694 Aconitase C-terminal domain BA953_RS01755 PF00285 Citrate synthase, C-terminal domain BA953_RS01775 PF06715 Gp5 C-terminal repeat (3 copies) BA953_RS01775 PF04717 Type VI secretion system, phage-baseplate injector BA953_RS01805 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BA953_RS01830 PF00004 ATPase family associated with various cellular activities (AAA) BA953_RS01830 PF10431 C-terminal, D2-small domain, of ClpB protein BA953_RS01830 PF07724 AAA domain (Cdc48 subfamily) BA953_RS01830 PF17871 AAA lid domain BA953_RS01860 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BA953_RS01875 PF00069 Protein kinase domain BA953_RS01895 PF01970 Tripartite tricarboxylate transporter TctA family BA953_RS01905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA953_RS01920 PF12792 CSS motif domain associated with EAL BA953_RS01920 PF00563 EAL domain BA953_RS01935 PF04204 Homoserine O-succinyltransferase BA953_RS01940 PF00561 alpha/beta hydrolase fold BA953_RS01940 PF00364 Biotin-requiring enzyme BA953_RS01955 PF05971 RNA methyltransferase BA953_RS01960 PF01863 Protein of unknown function DUF45 BA953_RS01970 PF00072 Response regulator receiver domain BA953_RS01970 PF09308 LuxQ, periplasmic BA953_RS01970 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS01970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS01980 PF00005 ABC transporter BA953_RS01985 PF03466 LysR substrate binding domain BA953_RS01985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS01990 PF07690 Major Facilitator Superfamily BA953_RS02000 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS02015 PF00005 ABC transporter BA953_RS02020 PF01032 FecCD transport family BA953_RS02025 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BA953_RS02035 PF00300 Histidine phosphatase superfamily (branch 1) BA953_RS02040 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BA953_RS02045 PF02654 Cobalamin-5-phosphate synthase BA953_RS02050 PF02277 Phosphoribosyltransferase BA953_RS02055 PF01613 Flavin reductase like domain BA953_RS02060 PF13460 NAD(P)H-binding BA953_RS02065 PF00375 Sodium:dicarboxylate symporter family BA953_RS02070 PF08411 Exonuclease C-terminal BA953_RS02070 PF00929 Exonuclease BA953_RS02075 PF03788 LrgA family BA953_RS02080 PF04172 LrgB-like family BA953_RS02085 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BA953_RS02085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA953_RS02090 PF01966 HD domain BA953_RS02090 PF11871 Domain of unknown function (DUF3391) BA953_RS02100 PF05724 Thiopurine S-methyltransferase (TPMT) BA953_RS02120 PF07070 SpoOM protein BA953_RS02125 PF00392 Bacterial regulatory proteins, gntR family BA953_RS02125 PF07702 UTRA domain BA953_RS02130 PF01979 Amidohydrolase family BA953_RS02135 PF00491 Arginase family BA953_RS02140 PF17391 Urocanase N-terminal domain BA953_RS02140 PF17392 Urocanase C-terminal domain BA953_RS02140 PF01175 Urocanase Rossmann-like domain BA953_RS02145 PF00221 Aromatic amino acid lyase BA953_RS02155 PF04191 Phospholipid methyltransferase BA953_RS02160 PF13183 4Fe-4S dicluster domain BA953_RS02160 PF01565 FAD binding domain BA953_RS02160 PF02913 FAD linked oxidases, C-terminal domain BA953_RS02175 PF00691 OmpA family BA953_RS02175 PF13488 Glycine zipper BA953_RS02190 PF14497 Glutathione S-transferase, C-terminal domain BA953_RS02190 PF02798 Glutathione S-transferase, N-terminal domain BA953_RS02200 PF04209 homogentisate 1,2-dioxygenase BA953_RS02205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA953_RS02210 PF07687 Peptidase dimerisation domain BA953_RS02210 PF01546 Peptidase family M20/M25/M40 BA953_RS02220 PF01810 LysE type translocator BA953_RS02230 PF13419 Haloacid dehalogenase-like hydrolase BA953_RS02235 PF00132 Bacterial transferase hexapeptide (six repeats) BA953_RS02235 PF12804 MobA-like NTP transferase domain BA953_RS02250 PF00583 Acetyltransferase (GNAT) family BA953_RS02275 PF13302 Acetyltransferase (GNAT) domain BA953_RS02280 PF13673 Acetyltransferase (GNAT) domain BA953_RS02335 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BA953_RS02375 PF03831 PhnA domain BA953_RS02375 PF08274 PhnA Zinc-Ribbon BA953_RS02400 PF01925 Sulfite exporter TauE/SafE BA953_RS02410 PF08267 Cobalamin-independent synthase, N-terminal domain BA953_RS02410 PF01717 Cobalamin-independent synthase, Catalytic domain BA953_RS02420 PF00583 Acetyltransferase (GNAT) family BA953_RS02435 PF09905 DNA-binding protein VF530 BA953_RS02460 PF13419 Haloacid dehalogenase-like hydrolase BA953_RS02470 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA953_RS02515 PF04229 GrpB protein BA953_RS02525 PF01527 Transposase BA953_RS02530 PF00665 Integrase core domain BA953_RS02530 PF13333 Integrase core domain BA953_RS02530 PF13276 HTH-like domain BA953_RS02545 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BA953_RS02630 PF00892 EamA-like transporter family BA953_RS02635 PF13520 Amino acid permease BA953_RS02645 PF00210 Ferritin-like domain BA953_RS02650 PF01734 Patatin-like phospholipase BA953_RS02655 PF02743 Cache domain BA953_RS02655 PF00672 HAMP domain BA953_RS02655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS02665 PF00196 Bacterial regulatory proteins, luxR family BA953_RS02665 PF00072 Response regulator receiver domain BA953_RS02670 PF17200 Single Cache domain 2 BA953_RS02670 PF07730 Histidine kinase BA953_RS02675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA953_RS02685 PF03480 Bacterial extracellular solute-binding protein, family 7 BA953_RS02700 PF00753 Metallo-beta-lactamase superfamily BA953_RS02705 PF05951 Bacterial protein of unknown function (DUF882) BA953_RS02710 PF01471 Putative peptidoglycan binding domain BA953_RS02710 PF03734 L,D-transpeptidase catalytic domain BA953_RS02735 PF00925 GTP cyclohydrolase II BA953_RS02760 PF13302 Acetyltransferase (GNAT) domain BA953_RS02765 PF18024 Helix-turn-helix domain BA953_RS02765 PF00158 Sigma-54 interaction domain BA953_RS02770 PF05128 Domain of unknown function (DUF697) BA953_RS02775 PF04317 YcjX-like family, DUF463 BA953_RS02790 PF00425 chorismate binding enzyme BA953_RS02790 PF04715 Anthranilate synthase component I, N terminal region BA953_RS02795 PF00072 Response regulator receiver domain BA953_RS02795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS02795 PF09308 LuxQ, periplasmic BA953_RS02795 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS02805 PF00293 NUDIX domain BA953_RS02810 PF03222 Tryptophan/tyrosine permease family BA953_RS02815 PF03315 Serine dehydratase beta chain BA953_RS02815 PF03313 Serine dehydratase alpha chain BA953_RS02820 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS02820 PF00563 EAL domain BA953_RS02820 PF03707 Bacterial signalling protein N terminal repeat BA953_RS02825 PF03222 Tryptophan/tyrosine permease family BA953_RS02835 PF00672 HAMP domain BA953_RS02835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS02835 PF12729 Four helix bundle sensory module for signal transduction BA953_RS02840 PF00152 tRNA synthetases class II (D, K and N) BA953_RS02840 PF01336 OB-fold nucleic acid binding domain BA953_RS02850 PF00155 Aminotransferase class I and II BA953_RS02850 PF00392 Bacterial regulatory proteins, gntR family BA953_RS02860 PF01966 HD domain BA953_RS02860 PF00672 HAMP domain BA953_RS02865 PF00155 Aminotransferase class I and II BA953_RS02880 PF11898 Domain of unknown function (DUF3418) BA953_RS02880 PF00271 Helicase conserved C-terminal domain BA953_RS02880 PF04408 Helicase associated domain (HA2) BA953_RS02880 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BA953_RS02880 PF00270 DEAD/DEAH box helicase BA953_RS02885 PF03949 Malic enzyme, NAD binding domain BA953_RS02885 PF00390 Malic enzyme, N-terminal domain BA953_RS02895 PF02698 DUF218 domain BA953_RS02905 PF00675 Insulinase (Peptidase family M16) BA953_RS02905 PF05193 Peptidase M16 inactive domain BA953_RS02920 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BA953_RS02925 PF00266 Aminotransferase class-V BA953_RS02935 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS02940 PF00005 ABC transporter BA953_RS02940 PF00664 ABC transporter transmembrane region BA953_RS02945 PF00005 ABC transporter BA953_RS02945 PF00664 ABC transporter transmembrane region BA953_RS02950 PF07690 Major Facilitator Superfamily BA953_RS02955 PF03466 LysR substrate binding domain BA953_RS02955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS02960 PF02567 Phenazine biosynthesis-like protein BA953_RS02965 PF00849 RNA pseudouridylate synthase BA953_RS02965 PF01479 S4 domain BA953_RS02970 PF03707 Bacterial signalling protein N terminal repeat BA953_RS02970 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS02970 PF00563 EAL domain BA953_RS02980 PF01300 Telomere recombination BA953_RS02985 PF02811 PHP domain BA953_RS02990 PF08056 Tryptophan operon leader peptide BA953_RS02995 PF04715 Anthranilate synthase component I, N terminal region BA953_RS02995 PF00425 chorismate binding enzyme BA953_RS03000 PF00117 Glutamine amidotransferase class-I BA953_RS03005 PF00591 Glycosyl transferase family, a/b domain BA953_RS03005 PF02885 Glycosyl transferase family, helical bundle domain BA953_RS03010 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BA953_RS03010 PF00218 Indole-3-glycerol phosphate synthase BA953_RS03015 PF00291 Pyridoxal-phosphate dependent enzyme BA953_RS03020 PF00290 Tryptophan synthase alpha chain BA953_RS03025 PF00375 Sodium:dicarboxylate symporter family BA953_RS03065 PF01494 FAD binding domain BA953_RS03085 PF00012 Hsp70 protein BA953_RS03090 PF00012 Hsp70 protein BA953_RS03100 PF00034 Cytochrome c BA953_RS03100 PF03150 Di-haem cytochrome c peroxidase BA953_RS03120 PF12833 Helix-turn-helix domain BA953_RS03120 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BA953_RS03130 PF04116 Fatty acid hydroxylase superfamily BA953_RS03160 PF02627 Carboxymuconolactone decarboxylase family BA953_RS03165 PF02743 Cache domain BA953_RS03165 PF00672 HAMP domain BA953_RS03165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS03185 PF01323 DSBA-like thioredoxin domain BA953_RS03195 PF02311 AraC-like ligand binding domain BA953_RS03195 PF12833 Helix-turn-helix domain BA953_RS03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS03200 PF03466 LysR substrate binding domain BA953_RS03215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA953_RS03215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA953_RS03225 PF03466 LysR substrate binding domain BA953_RS03225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS03240 PF01047 MarR family BA953_RS03245 PF02566 OsmC-like protein BA953_RS03250 PF08267 Cobalamin-independent synthase, N-terminal domain BA953_RS03250 PF01717 Cobalamin-independent synthase, Catalytic domain BA953_RS03255 PF03466 LysR substrate binding domain BA953_RS03255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS03270 PF03707 Bacterial signalling protein N terminal repeat BA953_RS03270 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS03270 PF00563 EAL domain BA953_RS03275 PF00563 EAL domain BA953_RS03275 PF03707 Bacterial signalling protein N terminal repeat BA953_RS03275 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS03280 PF11842 Domain of unknown function (DUF3362) BA953_RS03280 PF04055 Radical SAM superfamily BA953_RS03280 PF08497 Radical SAM N-terminal BA953_RS03285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS03285 PF12729 Four helix bundle sensory module for signal transduction BA953_RS03285 PF00672 HAMP domain BA953_RS03290 PF00266 Aminotransferase class-V BA953_RS03300 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS03300 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA953_RS03300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS03315 PF04993 TfoX N-terminal domain BA953_RS03315 PF04994 TfoX C-terminal domain BA953_RS03325 PF03956 Lysine exporter LysO BA953_RS03335 PF00282 Pyridoxal-dependent decarboxylase conserved domain BA953_RS03340 PF01380 SIS domain BA953_RS03340 PF01418 Helix-turn-helix domain, rpiR family BA953_RS03350 PF00462 Glutaredoxin BA953_RS03355 PF02080 TrkA-C domain BA953_RS03355 PF06826 Predicted Permease Membrane Region BA953_RS03360 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS03365 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS03370 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA953_RS03375 PF00005 ABC transporter BA953_RS03385 PF02901 Pyruvate formate lyase-like BA953_RS03385 PF01228 Glycine radical BA953_RS03395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS03395 PF00672 HAMP domain BA953_RS03400 PF04055 Radical SAM superfamily BA953_RS03410 PF03887 YfbU domain BA953_RS03415 PF06629 MltA-interacting protein MipA BA953_RS03420 PF08298 PrkA AAA domain BA953_RS03420 PF06798 PrkA serine protein kinase C-terminal domain BA953_RS03425 PF04285 Protein of unknown function (DUF444) BA953_RS03430 PF04293 SpoVR like protein BA953_RS03435 PF02348 Cytidylyltransferase BA953_RS03440 PF03966 Trm112p-like protein BA953_RS03445 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BA953_RS03450 PF00664 ABC transporter transmembrane region BA953_RS03450 PF00005 ABC transporter BA953_RS03455 PF03772 Competence protein BA953_RS03455 PF00753 Metallo-beta-lactamase superfamily BA953_RS03465 PF02687 FtsX-like permease family BA953_RS03465 PF12704 MacB-like periplasmic core domain BA953_RS03470 PF00005 ABC transporter BA953_RS03475 PF02687 FtsX-like permease family BA953_RS03475 PF12704 MacB-like periplasmic core domain BA953_RS03485 PF00270 DEAD/DEAH box helicase BA953_RS03485 PF02559 CarD-like/TRCF domain BA953_RS03485 PF03461 TRCF domain BA953_RS03485 PF00271 Helicase conserved C-terminal domain BA953_RS03485 PF17757 UvrB interaction domain BA953_RS03505 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS03510 PF05728 Uncharacterised protein family (UPF0227) BA953_RS03520 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BA953_RS03520 PF13036 Peptidoglycan-synthase activator LpoB BA953_RS03535 PF01230 HIT domain BA953_RS03540 PF00672 HAMP domain BA953_RS03540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS03550 PF00392 Bacterial regulatory proteins, gntR family BA953_RS03550 PF07840 FadR C-terminal domain BA953_RS03555 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BA953_RS03560 PF02600 Disulfide bond formation protein DsbB BA953_RS03565 PF17854 FtsK alpha domain BA953_RS03565 PF01580 FtsK/SpoIIIE family BA953_RS03565 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BA953_RS03565 PF09397 Ftsk gamma domain BA953_RS03570 PF01037 Lrp/AsnC ligand binding domain BA953_RS03575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BA953_RS03575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BA953_RS03580 PF04217 Protein of unknown function, DUF412 BA953_RS03585 PF00871 Acetokinase family BA953_RS03590 PF01515 Phosphate acetyl/butaryl transferase BA953_RS03590 PF07085 DRTGG domain BA953_RS03595 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS03595 PF17151 Periplasmic sensor domain BA953_RS03600 PF13409 Glutathione S-transferase, N-terminal domain BA953_RS03605 PF00005 ABC transporter BA953_RS03605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA953_RS03610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA953_RS03610 PF00005 ABC transporter BA953_RS03615 PF12911 N-terminal TM domain of oligopeptide transport permease C BA953_RS03615 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS03620 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS03625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA953_RS03635 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BA953_RS03640 PF17158 Membrane-associated sensor, integral membrane domain BA953_RS03640 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS03655 PF00672 HAMP domain BA953_RS03655 PF02743 Cache domain BA953_RS03655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS03660 PF04389 Peptidase family M28 BA953_RS03660 PF04151 Bacterial pre-peptidase C-terminal domain BA953_RS03665 PF05922 Peptidase inhibitor I9 BA953_RS03665 PF04151 Bacterial pre-peptidase C-terminal domain BA953_RS03665 PF00082 Subtilase family BA953_RS03670 PF00672 HAMP domain BA953_RS03670 PF02743 Cache domain BA953_RS03670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS03680 PF16200 C-terminal region of band_7 BA953_RS03680 PF01145 SPFH domain / Band 7 family BA953_RS03700 PF00005 ABC transporter BA953_RS03700 PF12704 MacB-like periplasmic core domain BA953_RS03700 PF02687 FtsX-like permease family BA953_RS03705 PF02687 FtsX-like permease family BA953_RS03705 PF00005 ABC transporter BA953_RS03705 PF12704 MacB-like periplasmic core domain BA953_RS03710 PF12704 MacB-like periplasmic core domain BA953_RS03710 PF02687 FtsX-like permease family BA953_RS03720 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA953_RS03730 PF04151 Bacterial pre-peptidase C-terminal domain BA953_RS03730 PF03413 Peptidase propeptide and YPEB domain BA953_RS03730 PF01447 Thermolysin metallopeptidase, catalytic domain BA953_RS03730 PF07504 Fungalysin/Thermolysin Propeptide Motif BA953_RS03730 PF02868 Thermolysin metallopeptidase, alpha-helical domain BA953_RS03740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BA953_RS03740 PF00326 Prolyl oligopeptidase family BA953_RS03745 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BA953_RS03745 PF18416 N-acetylglucosamine binding protein domain 2 BA953_RS03755 PF00535 Glycosyl transferase family 2 BA953_RS03765 PF07075 Protein of unknown function (DUF1343) BA953_RS03770 PF01915 Glycosyl hydrolase family 3 C-terminal domain BA953_RS03770 PF00933 Glycosyl hydrolase family 3 N terminal domain BA953_RS03790 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BA953_RS03795 PF03480 Bacterial extracellular solute-binding protein, family 7 BA953_RS03800 PF01266 FAD dependent oxidoreductase BA953_RS03815 PF03601 Conserved hypothetical protein 698 BA953_RS03820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA953_RS03820 PF00205 Thiamine pyrophosphate enzyme, central domain BA953_RS03820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA953_RS03825 PF07728 AAA domain (dynein-related subfamily) BA953_RS03825 PF08406 CbbQ/NirQ/NorQ C-terminal BA953_RS03825 PF12556 Cobaltochelatase CobS subunit N terminal BA953_RS03830 PF06213 Cobalamin biosynthesis protein CobT BA953_RS03830 PF11775 Cobalamin biosynthesis protein CobT VWA domain BA953_RS03835 PF01925 Sulfite exporter TauE/SafE BA953_RS03840 PF01515 Phosphate acetyl/butaryl transferase BA953_RS03845 PF09339 IclR helix-turn-helix domain BA953_RS03845 PF01614 Bacterial transcriptional regulator BA953_RS03890 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS03890 PF05230 MASE2 domain BA953_RS03900 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BA953_RS03905 PF09619 Type III secretion system lipoprotein chaperone (YscW) BA953_RS03925 PF01037 Lrp/AsnC ligand binding domain BA953_RS03925 PF13404 AsnC-type helix-turn-helix domain BA953_RS03930 PF00291 Pyridoxal-phosphate dependent enzyme BA953_RS03950 PF07690 Major Facilitator Superfamily BA953_RS03955 PF03601 Conserved hypothetical protein 698 BA953_RS03960 PF13193 AMP-binding enzyme C-terminal domain BA953_RS03960 PF00501 AMP-binding enzyme BA953_RS03965 PF13378 Enolase C-terminal domain-like BA953_RS03970 PF00378 Enoyl-CoA hydratase/isomerase BA953_RS03975 PF12697 Alpha/beta hydrolase family BA953_RS03980 PF16582 Middle domain of thiamine pyrophosphate BA953_RS03980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA953_RS03980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA953_RS03985 PF00425 chorismate binding enzyme BA953_RS03990 PF00155 Aminotransferase class I and II BA953_RS04000 PF00704 Glycosyl hydrolases family 18 BA953_RS04005 PF13286 Phosphohydrolase-associated domain BA953_RS04005 PF01966 HD domain BA953_RS04010 PF00962 Adenosine/AMP deaminase BA953_RS04025 PF00270 DEAD/DEAH box helicase BA953_RS04025 PF00271 Helicase conserved C-terminal domain BA953_RS04030 PF01343 Peptidase family S49 BA953_RS04030 PF08496 Peptidase family S49 N-terminal BA953_RS04035 PF00106 short chain dehydrogenase BA953_RS04050 PF02811 PHP domain BA953_RS04050 PF01336 OB-fold nucleic acid binding domain BA953_RS04050 PF14579 Helix-hairpin-helix motif BA953_RS04050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA953_RS04050 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA953_RS04055 PF01584 CheW-like domain BA953_RS04055 PF00072 Response regulator receiver domain BA953_RS04060 PF00480 ROK family BA953_RS04065 PF02887 Pyruvate kinase, alpha/beta domain BA953_RS04065 PF00224 Pyruvate kinase, barrel domain BA953_RS04070 PF01734 Patatin-like phospholipase BA953_RS04080 PF00209 Sodium:neurotransmitter symporter family BA953_RS04090 PF02378 Phosphotransferase system, EIIC BA953_RS04090 PF00367 phosphotransferase system, EIIB BA953_RS04095 PF01026 TatD related DNase BA953_RS04100 PF09115 DNA polymerase III, delta subunit, C terminal BA953_RS04105 PF02223 Thymidylate kinase BA953_RS04110 PF02618 YceG-like family BA953_RS04115 PF01063 Amino-transferase class IV BA953_RS04120 PF02801 Beta-ketoacyl synthase, C-terminal domain BA953_RS04120 PF00109 Beta-ketoacyl synthase, N-terminal domain BA953_RS04125 PF00550 Phosphopantetheine attachment site BA953_RS04135 PF00698 Acyl transferase domain BA953_RS04140 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BA953_RS04140 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BA953_RS04145 PF02504 Fatty acid synthesis protein BA953_RS04150 PF01783 Ribosomal L32p protein family BA953_RS04155 PF02620 Large ribosomal RNA subunit accumulation protein YceD BA953_RS04160 PF02545 Maf-like protein BA953_RS04165 PF01479 S4 domain BA953_RS04165 PF00849 RNA pseudouridylate synthase BA953_RS04170 PF00575 S1 RNA binding domain BA953_RS04170 PF10150 Ribonuclease E/G family BA953_RS04170 PF12111 Polyribonucleotide phosphorylase C terminal BA953_RS04175 PF01740 STAS domain BA953_RS04175 PF00916 Sulfate permease family BA953_RS04180 PF00570 HRDC domain BA953_RS04180 PF01612 3'-5' exonuclease BA953_RS04185 PF13193 AMP-binding enzyme C-terminal domain BA953_RS04185 PF00501 AMP-binding enzyme BA953_RS04190 PF00561 alpha/beta hydrolase fold BA953_RS04205 PF00814 Glycoprotease family BA953_RS04210 PF04851 Type III restriction enzyme, res subunit BA953_RS04210 PF13307 Helicase C-terminal domain BA953_RS04220 PF01842 ACT domain BA953_RS04220 PF00551 Formyl transferase BA953_RS04225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA953_RS04225 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS04230 PF01343 Peptidase family S49 BA953_RS04235 PF17763 Glutaminase/Asparaginase C-terminal domain BA953_RS04235 PF00710 Asparaginase, N-terminal BA953_RS04245 PF02403 Seryl-tRNA synthetase N-terminal domain BA953_RS04245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA953_RS04250 PF16193 AAA C-terminal domain BA953_RS04250 PF12002 MgsA AAA+ ATPase C terminal BA953_RS04250 PF00004 ATPase family associated with various cellular activities (AAA) BA953_RS04255 PF03548 Outer membrane lipoprotein carrier protein LolA BA953_RS04260 PF07516 SecA Wing and Scaffold domain BA953_RS04260 PF01043 SecA preprotein cross-linking domain BA953_RS04260 PF07517 SecA DEAD-like domain BA953_RS04260 PF02810 SEC-C motif BA953_RS04270 PF01207 Dihydrouridine synthase (Dus) BA953_RS04275 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS04275 PF05230 MASE2 domain BA953_RS04280 PF00005 ABC transporter BA953_RS04285 PF02653 Branched-chain amino acid transport system / permease component BA953_RS04300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS04300 PF03466 LysR substrate binding domain BA953_RS04310 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BA953_RS04320 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BA953_RS04325 PF18073 Rubredoxin metal binding domain BA953_RS04330 PF06305 Lipopolysaccharide assembly protein A domain BA953_RS04335 PF00216 Bacterial DNA-binding protein BA953_RS04340 PF00575 S1 RNA binding domain BA953_RS04345 PF02224 Cytidylate kinase BA953_RS04355 PF13145 PPIC-type PPIASE domain BA953_RS04360 PF00216 Bacterial DNA-binding protein BA953_RS04365 PF02190 ATP-dependent protease La (LON) substrate-binding domain BA953_RS04365 PF00004 ATPase family associated with various cellular activities (AAA) BA953_RS04365 PF05362 Lon protease (S16) C-terminal proteolytic domain BA953_RS04370 PF10431 C-terminal, D2-small domain, of ClpB protein BA953_RS04370 PF07724 AAA domain (Cdc48 subfamily) BA953_RS04370 PF06689 ClpX C4-type zinc finger BA953_RS04375 PF00574 Clp protease BA953_RS04380 PF05697 Bacterial trigger factor protein (TF) BA953_RS04380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA953_RS04380 PF05698 Bacterial trigger factor protein (TF) C-terminus BA953_RS04385 PF02743 Cache domain BA953_RS04385 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS04390 PF00158 Sigma-54 interaction domain BA953_RS04390 PF02954 Bacterial regulatory protein, Fis family BA953_RS04390 PF00072 Response regulator receiver domain BA953_RS04400 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BA953_RS04405 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BA953_RS04410 PF03480 Bacterial extracellular solute-binding protein, family 7 BA953_RS04415 PF00005 ABC transporter BA953_RS04415 PF17912 MalK OB fold domain BA953_RS04415 PF03459 TOBE domain BA953_RS04420 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS04425 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS04430 PF01547 Bacterial extracellular solute-binding protein BA953_RS04435 PF00672 HAMP domain BA953_RS04435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS04435 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS04440 PF00072 Response regulator receiver domain BA953_RS04440 PF00486 Transcriptional regulatory protein, C terminal BA953_RS04445 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BA953_RS04460 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BA953_RS04460 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BA953_RS04465 PF13662 Toprim domain BA953_RS04465 PF02132 RecR protein BA953_RS04470 PF02575 YbaB/EbfC DNA-binding family BA953_RS04475 PF12169 DNA polymerase III subunits gamma and tau domain III BA953_RS04475 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BA953_RS04475 PF12170 DNA polymerase III tau subunit V interacting with alpha BA953_RS04480 PF00156 Phosphoribosyl transferase domain BA953_RS04485 PF04304 Protein of unknown function (DUF454) BA953_RS04490 PF00072 Response regulator receiver domain BA953_RS04495 PF03466 LysR substrate binding domain BA953_RS04495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS04500 PF00881 Nitroreductase family BA953_RS04505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA953_RS04505 PF00378 Enoyl-CoA hydratase/isomerase BA953_RS04505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA953_RS04510 PF02803 Thiolase, C-terminal domain BA953_RS04510 PF00108 Thiolase, N-terminal domain BA953_RS04515 PF04542 Sigma-70 region 2 BA953_RS04515 PF08281 Sigma-70, region 4 BA953_RS04525 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BA953_RS04530 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BA953_RS04535 PF04333 MlaA lipoprotein BA953_RS04540 PF03918 Cytochrome C biogenesis protein BA953_RS04545 PF03918 Cytochrome C biogenesis protein BA953_RS04550 PF08534 Redoxin BA953_RS04555 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BA953_RS04555 PF01578 Cytochrome C assembly protein BA953_RS04560 PF03100 CcmE BA953_RS04565 PF04995 Heme exporter protein D (CcmD) BA953_RS04570 PF01578 Cytochrome C assembly protein BA953_RS04575 PF03379 CcmB protein BA953_RS04580 PF00005 ABC transporter BA953_RS04590 PF01584 CheW-like domain BA953_RS04600 PF13614 AAA domain BA953_RS04605 PF00072 Response regulator receiver domain BA953_RS04605 PF01339 CheB methylesterase BA953_RS04610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS04610 PF01627 Hpt domain BA953_RS04610 PF00072 Response regulator receiver domain BA953_RS04610 PF02895 Signal transducing histidine kinase, homodimeric domain BA953_RS04610 PF01584 CheW-like domain BA953_RS04615 PF04344 Chemotaxis phosphatase, CheZ BA953_RS04620 PF00072 Response regulator receiver domain BA953_RS04625 PF04542 Sigma-70 region 2 BA953_RS04625 PF04539 Sigma-70 region 3 BA953_RS04625 PF04545 Sigma-70, region 4 BA953_RS04630 PF10609 NUBPL iron-transfer P-loop NTPase BA953_RS04635 PF00448 SRP54-type protein, GTPase domain BA953_RS04640 PF00771 FHIPEP family BA953_RS04645 PF00300 Histidine phosphatase superfamily (branch 1) BA953_RS04650 PF05193 Peptidase M16 inactive domain BA953_RS04650 PF00675 Insulinase (Peptidase family M16) BA953_RS04655 PF06185 YecM protein BA953_RS04660 PF05746 DALR anticodon binding domain BA953_RS04660 PF03485 Arginyl tRNA synthetase N terminal domain BA953_RS04660 PF00750 tRNA synthetases class I (R) BA953_RS04675 PF07670 Nucleoside recognition BA953_RS04675 PF07664 Ferrous iron transport protein B C terminus BA953_RS04675 PF02421 Ferrous iron transport protein B BA953_RS04680 PF04023 FeoA domain BA953_RS04685 PF12833 Helix-turn-helix domain BA953_RS04685 PF02311 AraC-like ligand binding domain BA953_RS04690 PF01297 Zinc-uptake complex component A periplasmic BA953_RS04695 PF00005 ABC transporter BA953_RS04700 PF00950 ABC 3 transport family BA953_RS04705 PF00156 Phosphoribosyl transferase domain BA953_RS04710 PF02674 Colicin V production protein BA953_RS04715 PF05036 Sporulation related domain BA953_RS04720 PF08245 Mur ligase middle domain BA953_RS04720 PF02875 Mur ligase family, glutamate ligase domain BA953_RS04725 PF01039 Carboxyl transferase domain BA953_RS04725 PF17848 Acetyl-coA carboxylase zinc finger domain BA953_RS04730 PF01416 tRNA pseudouridine synthase BA953_RS04740 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA953_RS04740 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA953_RS04745 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA953_RS04745 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA953_RS04745 PF11890 Domain of unknown function (DUF3410) BA953_RS04750 PF02801 Beta-ketoacyl synthase, C-terminal domain BA953_RS04750 PF00109 Beta-ketoacyl synthase, N-terminal domain BA953_RS04755 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BA953_RS04755 PF01266 FAD dependent oxidoreductase BA953_RS04760 PF03358 NADPH-dependent FMN reductase BA953_RS04765 PF08891 YfcL protein BA953_RS04780 PF04315 Elongation factor P hydroxylase BA953_RS04785 PF03458 UPF0126 domain BA953_RS04795 PF01264 Chorismate synthase BA953_RS04800 PF05175 Methyltransferase small domain BA953_RS04805 PF01713 Smr domain BA953_RS04810 PF01312 FlhB HrpN YscU SpaS Family BA953_RS04815 PF01311 Bacterial export proteins, family 1 BA953_RS04820 PF01313 Bacterial export proteins, family 3 BA953_RS04825 PF00813 FliP family BA953_RS04830 PF04347 Flagellar biosynthesis protein, FliO BA953_RS04835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BA953_RS04840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BA953_RS04840 PF02154 Flagellar motor switch protein FliM BA953_RS04860 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA953_RS04860 PF18269 T3SS EscN ATPase C-terminal domain BA953_RS04870 PF01706 FliG C-terminal domain BA953_RS04870 PF14841 FliG middle domain BA953_RS04870 PF14842 FliG N-terminal domain BA953_RS04875 PF01514 Secretory protein of YscJ/FliF family BA953_RS04875 PF08345 Flagellar M-ring protein C-terminal BA953_RS04880 PF02049 Flagellar hook-basal body complex protein FliE BA953_RS04885 PF02954 Bacterial regulatory protein, Fis family BA953_RS04885 PF00158 Sigma-54 interaction domain BA953_RS04885 PF00072 Response regulator receiver domain BA953_RS04890 PF13188 PAS domain BA953_RS04890 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS04895 PF02954 Bacterial regulatory protein, Fis family BA953_RS04895 PF00158 Sigma-54 interaction domain BA953_RS04895 PF06490 Flagellar regulatory protein FleQ BA953_RS04900 PF02561 Flagellar protein FliS BA953_RS04910 PF07195 Flagellar hook-associated protein 2 C-terminus BA953_RS04910 PF07196 Flagellin hook IN motif BA953_RS04910 PF02465 Flagellar hook-associated protein 2 N-terminus BA953_RS04915 PF03646 FlaG protein BA953_RS04920 PF00669 Bacterial flagellin N-terminal helical region BA953_RS04920 PF07196 Flagellin hook IN motif BA953_RS04920 PF00700 Bacterial flagellin C-terminal helical region BA953_RS04925 PF07196 Flagellin hook IN motif BA953_RS04925 PF00700 Bacterial flagellin C-terminal helical region BA953_RS04925 PF00669 Bacterial flagellin N-terminal helical region BA953_RS04930 PF07196 Flagellin hook IN motif BA953_RS04930 PF00700 Bacterial flagellin C-terminal helical region BA953_RS04930 PF00669 Bacterial flagellin N-terminal helical region BA953_RS04935 PF04261 Dyp-type peroxidase family BA953_RS04940 PF11143 Protein of unknown function (DUF2919) BA953_RS04945 PF03918 Cytochrome C biogenesis protein BA953_RS04950 PF08534 Redoxin BA953_RS04955 PF01578 Cytochrome C assembly protein BA953_RS04955 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BA953_RS04960 PF03916 Polysulphide reductase, NrfD BA953_RS04965 PF00037 4Fe-4S binding domain BA953_RS04965 PF13247 4Fe-4S dicluster domain BA953_RS04975 PF02335 Cytochrome c552 BA953_RS05000 PF03960 ArsC family BA953_RS05005 PF01546 Peptidase family M20/M25/M40 BA953_RS05005 PF07687 Peptidase dimerisation domain BA953_RS05020 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) BA953_RS05025 PF07348 Syd protein (SUKH-2) BA953_RS05030 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BA953_RS05030 PF14489 QueF-like protein BA953_RS05040 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS05045 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BA953_RS05045 PF11892 Domain of unknown function (DUF3412) BA953_RS05045 PF03641 Possible lysine decarboxylase BA953_RS05050 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BA953_RS05050 PF01367 5'-3' exonuclease, C-terminal SAM fold BA953_RS05055 PF01223 DNA/RNA non-specific endonuclease BA953_RS05060 PF01728 FtsJ-like methyltransferase BA953_RS05060 PF18125 RlmM ferredoxin-like domain BA953_RS05075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS05075 PF03466 LysR substrate binding domain BA953_RS05080 PF02926 THUMP domain BA953_RS05080 PF02568 Thiamine biosynthesis protein (ThiI) BA953_RS05085 PF13677 Membrane MotB of proton-channel complex MotA/MotB BA953_RS05085 PF00691 OmpA family BA953_RS05090 PF01618 MotA/TolQ/ExbB proton channel family BA953_RS05095 PF02609 Exonuclease VII small subunit BA953_RS05100 PF00348 Polyprenyl synthetase BA953_RS05105 PF02780 Transketolase, C-terminal domain BA953_RS05105 PF02779 Transketolase, pyrimidine binding domain BA953_RS05105 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BA953_RS05110 PF00849 RNA pseudouridylate synthase BA953_RS05115 PF04287 tRNA pseudouridine synthase C BA953_RS05135 PF02629 CoA binding domain BA953_RS05135 PF00549 CoA-ligase BA953_RS05140 PF08442 ATP-grasp domain BA953_RS05140 PF00549 CoA-ligase BA953_RS05145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA953_RS05145 PF00364 Biotin-requiring enzyme BA953_RS05145 PF02817 e3 binding domain BA953_RS05150 PF00676 Dehydrogenase E1 component BA953_RS05150 PF02779 Transketolase, pyrimidine binding domain BA953_RS05150 PF16870 2-oxoglutarate dehydrogenase C-terminal BA953_RS05150 PF16078 2-oxoglutarate dehydrogenase N-terminus BA953_RS05155 PF13085 2Fe-2S iron-sulfur cluster binding domain BA953_RS05160 PF02910 Fumarate reductase flavoprotein C-term BA953_RS05160 PF00890 FAD binding domain BA953_RS05165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BA953_RS05170 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BA953_RS05175 PF00285 Citrate synthase, C-terminal domain BA953_RS05180 PF01784 NIF3 (NGG1p interacting factor 3) BA953_RS05190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA953_RS05190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA953_RS05190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA953_RS05190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA953_RS05195 PF03925 SeqA protein C-terminal domain BA953_RS05195 PF17206 SeqA protein N-terminal domain BA953_RS05200 PF12697 Alpha/beta hydrolase family BA953_RS05210 PF00258 Flavodoxin BA953_RS05220 PF01475 Ferric uptake regulator family BA953_RS05225 PF01180 Dihydroorotate dehydrogenase BA953_RS05235 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BA953_RS05235 PF00749 tRNA synthetases class I (E and Q), catalytic domain BA953_RS05240 PF00367 phosphotransferase system, EIIB BA953_RS05240 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA953_RS05240 PF02378 Phosphotransferase system, EIIC BA953_RS05245 PF01979 Amidohydrolase family BA953_RS05250 PF00480 ROK family BA953_RS05250 PF01047 MarR family BA953_RS05255 PF00999 Sodium/hydrogen exchanger family BA953_RS05255 PF02254 TrkA-N domain BA953_RS05260 PF13537 Glutamine amidotransferase domain BA953_RS05260 PF00733 Asparagine synthase BA953_RS05265 PF00854 POT family BA953_RS05270 PF02838 Glycosyl hydrolase family 20, domain 2 BA953_RS05270 PF00728 Glycosyl hydrolase family 20, catalytic domain BA953_RS05270 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BA953_RS05270 PF03173 Putative carbohydrate binding domain BA953_RS05290 PF01713 Smr domain BA953_RS05295 PF00849 RNA pseudouridylate synthase BA953_RS05295 PF01479 S4 domain BA953_RS05305 PF02769 AIR synthase related protein, C-terminal domain BA953_RS05305 PF00586 AIR synthase related protein, N-terminal domain BA953_RS05310 PF00551 Formyl transferase BA953_RS05320 PF06786 Uncharacterised protein family (UPF0253) BA953_RS05335 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BA953_RS05335 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BA953_RS05335 PF02769 AIR synthase related protein, C-terminal domain BA953_RS05340 PF01464 Transglycosylase SLT domain BA953_RS05340 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA953_RS05350 PF03806 AbgT putative transporter family BA953_RS05370 PF07963 Prokaryotic N-terminal methylation motif BA953_RS05375 PF07963 Prokaryotic N-terminal methylation motif BA953_RS05375 PF00114 Pilin (bacterial filament) BA953_RS05380 PF00684 DnaJ central domain BA953_RS05380 PF01556 DnaJ C terminal domain BA953_RS05380 PF00226 DnaJ domain BA953_RS05385 PF00012 Hsp70 protein BA953_RS05390 PF00375 Sodium:dicarboxylate symporter family BA953_RS05395 PF01025 GrpE BA953_RS05400 PF01513 ATP-NAD kinase BA953_RS05405 PF02463 RecF/RecN/SMC N terminal domain BA953_RS05410 PF04355 SmpA / OmlA family BA953_RS05415 PF03658 RnfH family Ubiquitin BA953_RS05420 PF03364 Polyketide cyclase / dehydrase and lipid transport BA953_RS05425 PF01668 SmpB protein BA953_RS05435 PF00589 Phage integrase family BA953_RS05435 PF13356 Arm DNA-binding domain BA953_RS05440 PF04471 Restriction endonuclease BA953_RS05440 PF14338 Mrr N-terminal domain BA953_RS05455 PF01420 Type I restriction modification DNA specificity domain BA953_RS05460 PF02384 N-6 DNA Methylase BA953_RS05465 PF02796 Helix-turn-helix domain of resolvase BA953_RS05465 PF00239 Resolvase, N terminal domain BA953_RS05495 PF01381 Helix-turn-helix BA953_RS05500 PF13657 HipA N-terminal domain BA953_RS05500 PF07804 HipA-like C-terminal domain BA953_RS05510 PF12852 Cupin BA953_RS05510 PF12833 Helix-turn-helix domain BA953_RS05515 PF12706 Beta-lactamase superfamily domain BA953_RS05565 PF03412 Peptidase C39 family BA953_RS05565 PF00664 ABC transporter transmembrane region BA953_RS05565 PF00005 ABC transporter BA953_RS05570 PF12833 Helix-turn-helix domain BA953_RS05570 PF02311 AraC-like ligand binding domain BA953_RS05580 PF08447 PAS fold BA953_RS05580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS05580 PF13426 PAS domain BA953_RS05585 PF00924 Mechanosensitive ion channel BA953_RS05590 PF02028 BCCT, betaine/carnitine/choline family transporter BA953_RS05605 PF05922 Peptidase inhibitor I9 BA953_RS05605 PF00082 Subtilase family BA953_RS05615 PF01553 Acyltransferase BA953_RS05620 PF00072 Response regulator receiver domain BA953_RS05620 PF01584 CheW-like domain BA953_RS05625 PF01053 Cys/Met metabolism PLP-dependent enzyme BA953_RS05635 PF07885 Ion channel BA953_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS05640 PF03466 LysR substrate binding domain BA953_RS05645 PF01266 FAD dependent oxidoreductase BA953_RS05650 PF01235 Sodium:alanine symporter family BA953_RS05655 PF01184 GPR1/FUN34/yaaH family BA953_RS05660 PF06483 Chitinase C BA953_RS05660 PF00704 Glycosyl hydrolases family 18 BA953_RS05665 PF00958 GMP synthase C terminal domain BA953_RS05665 PF00117 Glutamine amidotransferase class-I BA953_RS05665 PF02540 NAD synthase BA953_RS05670 PF00478 IMP dehydrogenase / GMP reductase domain BA953_RS05670 PF00571 CBS domain BA953_RS05675 PF13742 OB-fold nucleic acid binding domain BA953_RS05675 PF02601 Exonuclease VII, large subunit BA953_RS05685 PF13185 GAF domain BA953_RS05685 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS05695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BA953_RS05695 PF01926 50S ribosome-binding GTPase BA953_RS05700 PF13360 PQQ-like domain BA953_RS05705 PF09976 Tetratricopeptide repeat-like domain BA953_RS05710 PF03129 Anticodon binding domain BA953_RS05710 PF13393 Histidyl-tRNA synthetase BA953_RS05715 PF04551 GcpE protein BA953_RS05720 PF13464 Domain of unknown function (DUF4115) BA953_RS05725 PF04055 Radical SAM superfamily BA953_RS05730 PF02657 Fe-S metabolism associated domain BA953_RS05735 PF00899 ThiF family BA953_RS05740 PF06725 3D domain BA953_RS05740 PF03562 MltA specific insert domain BA953_RS05750 PF00583 Acetyltransferase (GNAT) family BA953_RS05750 PF00696 Amino acid kinase family BA953_RS05760 PF13538 UvrD-like helicase C-terminal domain BA953_RS05765 PF12705 PD-(D/E)XK nuclease superfamily BA953_RS05765 PF00580 UvrD/REP helicase N-terminal domain BA953_RS05765 PF13361 UvrD-like helicase C-terminal domain BA953_RS05770 PF17946 RecC C-terminal domain BA953_RS05780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS05780 PF03466 LysR substrate binding domain BA953_RS05785 PF00873 AcrB/AcrD/AcrF family BA953_RS05790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA953_RS05790 PF00529 HlyD membrane-fusion protein of T1SS BA953_RS05795 PF00440 Bacterial regulatory proteins, tetR family BA953_RS05800 PF07130 YebG protein BA953_RS05805 PF03932 CutC family BA953_RS05810 PF03976 Polyphosphate kinase 2 (PPK2) BA953_RS05815 PF01895 PhoU domain BA953_RS05820 PF00005 ABC transporter BA953_RS05825 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS05830 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS05835 PF13090 Polyphosphate kinase C-terminal domain 2 BA953_RS05835 PF13089 Polyphosphate kinase N-terminal domain BA953_RS05835 PF17941 Polyphosphate kinase C-terminal domain 1 BA953_RS05835 PF02503 Polyphosphate kinase middle domain BA953_RS05840 PF02541 Ppx/GppA phosphatase family BA953_RS05845 PF12849 PBP superfamily domain BA953_RS05850 PF00989 PAS fold BA953_RS05850 PF11808 Phosphate regulon sensor protein PhoR BA953_RS05850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS05850 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS05855 PF00486 Transcriptional regulatory protein, C terminal BA953_RS05855 PF00072 Response regulator receiver domain BA953_RS05860 PF04381 Putative exonuclease, RdgC BA953_RS05865 PF01136 Peptidase family U32 BA953_RS05865 PF16325 Peptidase family U32 C-terminal domain BA953_RS05870 PF12838 4Fe-4S dicluster domain BA953_RS05875 PF03411 Penicillin-insensitive murein endopeptidase BA953_RS05890 PF07549 SecD/SecF GG Motif BA953_RS05890 PF02355 Protein export membrane protein BA953_RS05895 PF07549 SecD/SecF GG Motif BA953_RS05895 PF13721 SecD export protein N-terminal TM region BA953_RS05895 PF02355 Protein export membrane protein BA953_RS05900 PF02699 Preprotein translocase subunit BA953_RS05905 PF01702 Queuine tRNA-ribosyltransferase BA953_RS05910 PF02547 Queuosine biosynthesis protein BA953_RS05915 PF00571 CBS domain BA953_RS05920 PF00463 Isocitrate lyase family BA953_RS05925 PF01274 Malate synthase BA953_RS05935 PF10417 C-terminal domain of 1-Cys peroxiredoxin BA953_RS05935 PF00578 AhpC/TSA family BA953_RS05940 PF14602 Hexapeptide repeat of succinyl-transferase BA953_RS05940 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle BA953_RS05950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA953_RS05960 PF12833 Helix-turn-helix domain BA953_RS05965 PF02378 Phosphotransferase system, EIIC BA953_RS05965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA953_RS05965 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA953_RS05980 PF01588 Putative tRNA binding domain BA953_RS05985 PF00356 Bacterial regulatory proteins, lacI family BA953_RS05995 PF00288 GHMP kinases N terminal domain BA953_RS05995 PF10509 Galactokinase galactose-binding signature BA953_RS05995 PF08544 GHMP kinases C terminal BA953_RS06000 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BA953_RS06000 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BA953_RS06005 PF16363 GDP-mannose 4,6 dehydratase BA953_RS06010 PF00356 Bacterial regulatory proteins, lacI family BA953_RS06015 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BA953_RS06015 PF00703 Glycosyl hydrolases family 2 BA953_RS06015 PF02837 Glycosyl hydrolases family 2, sugar binding domain BA953_RS06015 PF16353 Domain of unknown function(DUF4981) BA953_RS06015 PF02929 Beta galactosidase small chain BA953_RS06020 PF04074 YhcH/YjgK/YiaL BA953_RS06025 PF13520 Amino acid permease BA953_RS06030 PF00440 Bacterial regulatory proteins, tetR family BA953_RS06035 PF12706 Beta-lactamase superfamily domain BA953_RS06045 PF01204 Trehalase BA953_RS06060 PF02056 Family 4 glycosyl hydrolase BA953_RS06060 PF11975 Family 4 glycosyl hydrolase C-terminal domain BA953_RS06065 PF12833 Helix-turn-helix domain BA953_RS06075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS06075 PF03466 LysR substrate binding domain BA953_RS06100 PF00437 Type II/IV secretion system protein BA953_RS06130 PF13629 Pilus formation protein N terminal region BA953_RS06130 PF04972 BON domain BA953_RS06130 PF00263 Bacterial type II and III secretion system protein BA953_RS06165 PF12833 Helix-turn-helix domain BA953_RS06165 PF02805 Metal binding domain of Ada BA953_RS06170 PF00501 AMP-binding enzyme BA953_RS06175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS06175 PF03466 LysR substrate binding domain BA953_RS06185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS06185 PF03466 LysR substrate binding domain BA953_RS06190 PF14492 Elongation Factor G, domain II BA953_RS06190 PF03144 Elongation factor Tu domain 2 BA953_RS06190 PF00009 Elongation factor Tu GTP binding domain BA953_RS06190 PF00679 Elongation factor G C-terminus BA953_RS06190 PF03764 Elongation factor G, domain IV BA953_RS06195 PF00334 Nucleoside diphosphate kinase BA953_RS06200 PF12404 Peptidase BA953_RS06200 PF00883 Cytosol aminopeptidase family, catalytic domain BA953_RS06205 PF04384 Iron-sulphur cluster assembly BA953_RS06210 PF00111 2Fe-2S iron-sulfur cluster binding domain BA953_RS06215 PF00012 Hsp70 protein BA953_RS06220 PF00226 DnaJ domain BA953_RS06220 PF07743 HSCB C-terminal oligomerisation domain BA953_RS06225 PF01521 Iron-sulphur cluster biosynthesis BA953_RS06230 PF01592 NifU-like N terminal domain BA953_RS06235 PF00266 Aminotransferase class-V BA953_RS06240 PF02082 Transcriptional regulator BA953_RS06245 PF00588 SpoU rRNA Methylase family BA953_RS06250 PF00459 Inositol monophosphatase family BA953_RS06290 PF17871 AAA lid domain BA953_RS06290 PF10431 C-terminal, D2-small domain, of ClpB protein BA953_RS06290 PF02861 Clp amino terminal domain, pathogenicity island component BA953_RS06290 PF00004 ATPase family associated with various cellular activities (AAA) BA953_RS06290 PF07724 AAA domain (Cdc48 subfamily) BA953_RS06295 PF02578 Multi-copper polyphenol oxidoreductase laccase BA953_RS06300 PF01479 S4 domain BA953_RS06300 PF00849 RNA pseudouridylate synthase BA953_RS06305 PF13525 Outer membrane lipoprotein BA953_RS06310 PF01464 Transglycosylase SLT domain BA953_RS06315 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BA953_RS06320 PF00800 Prephenate dehydratase BA953_RS06320 PF01817 Chorismate mutase type II BA953_RS06325 PF13416 Bacterial extracellular solute-binding protein BA953_RS06330 PF00563 EAL domain BA953_RS06330 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS06335 PF01931 Protein of unknown function DUF84 BA953_RS06340 PF01371 Trp repressor protein BA953_RS06345 PF14718 Soluble lytic murein transglycosylase L domain BA953_RS06345 PF01464 Transglycosylase SLT domain BA953_RS06350 PF00005 ABC transporter BA953_RS06350 PF12848 ABC transporter BA953_RS06355 PF07238 PilZ domain BA953_RS06360 PF01551 Peptidase family M23 BA953_RS06360 PF04225 Opacity-associated protein A LysM-like domain BA953_RS06365 PF01817 Chorismate mutase type II BA953_RS06365 PF02153 Prephenate dehydrogenase BA953_RS06370 PF00793 DAHP synthetase I family BA953_RS06375 PF07694 5TMR of 5TMR-LYT BA953_RS06375 PF06580 Histidine kinase BA953_RS06380 PF04397 LytTr DNA-binding domain BA953_RS06380 PF00072 Response regulator receiver domain BA953_RS06385 PF00933 Glycosyl hydrolase family 3 N terminal domain BA953_RS06390 PF01380 SIS domain BA953_RS06390 PF01418 Helix-turn-helix domain, rpiR family BA953_RS06405 PF03702 Anhydro-N-acetylmuramic acid kinase BA953_RS06410 PF13580 SIS domain BA953_RS06420 PF02554 Carbon starvation protein CstA BA953_RS06425 PF02401 LytB protein BA953_RS06430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA953_RS06435 PF01252 Signal peptidase (SPase) II BA953_RS06440 PF08264 Anticodon-binding domain of tRNA BA953_RS06440 PF00133 tRNA synthetases class I (I, L, M and V) BA953_RS06440 PF06827 Zinc finger found in FPG and IleRS BA953_RS06445 PF01687 Riboflavin kinase BA953_RS06445 PF06574 FAD synthetase BA953_RS06450 PF03023 Lipid II flippase MurJ BA953_RS06455 PF01649 Ribosomal protein S20 BA953_RS06460 PF01022 Bacterial regulatory protein, arsR family BA953_RS06465 PF03466 LysR substrate binding domain BA953_RS06465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS06475 PF02690 Na+/Pi-cotransporter BA953_RS06480 PF00303 Thymidylate synthase BA953_RS06485 PF01790 Prolipoprotein diacylglyceryl transferase BA953_RS06490 PF01925 Sulfite exporter TauE/SafE BA953_RS06495 PF00391 PEP-utilising enzyme, mobile domain BA953_RS06495 PF05524 PEP-utilising enzyme, N-terminal BA953_RS06495 PF01590 GAF domain BA953_RS06495 PF02896 PEP-utilising enzyme, TIM barrel domain BA953_RS06505 PF02976 DNA mismatch repair enzyme MutH BA953_RS06515 PF00248 Aldo/keto reductase family BA953_RS06525 PF00158 Sigma-54 interaction domain BA953_RS06525 PF02954 Bacterial regulatory protein, Fis family BA953_RS06525 PF00072 Response regulator receiver domain BA953_RS06535 PF01047 MarR family BA953_RS06540 PF13181 Tetratricopeptide repeat BA953_RS06540 PF07719 Tetratricopeptide repeat BA953_RS06545 PF03725 3' exoribonuclease family, domain 2 BA953_RS06545 PF00575 S1 RNA binding domain BA953_RS06545 PF01138 3' exoribonuclease family, domain 1 BA953_RS06545 PF00013 KH domain BA953_RS06545 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BA953_RS06550 PF00312 Ribosomal protein S15 BA953_RS06555 PF01048 Phosphorylase superfamily BA953_RS06560 PF03186 CobD/Cbib protein BA953_RS06565 PF01497 Periplasmic binding protein BA953_RS06570 PF03458 UPF0126 domain BA953_RS06575 PF14821 Threonine synthase N terminus BA953_RS06575 PF00291 Pyridoxal-phosphate dependent enzyme BA953_RS06580 PF08544 GHMP kinases C terminal BA953_RS06580 PF00288 GHMP kinases N terminal domain BA953_RS06585 PF00696 Amino acid kinase family BA953_RS06585 PF03447 Homoserine dehydrogenase, NAD binding domain BA953_RS06585 PF00742 Homoserine dehydrogenase BA953_RS06585 PF13840 ACT domain BA953_RS06585 PF01842 ACT domain BA953_RS06595 PF03737 Aldolase/RraA BA953_RS06605 PF00486 Transcriptional regulatory protein, C terminal BA953_RS06605 PF00072 Response regulator receiver domain BA953_RS06610 PF01467 Cytidylyltransferase-like BA953_RS06610 PF00294 pfkB family carbohydrate kinase BA953_RS06615 PF08335 GlnD PII-uridylyltransferase BA953_RS06615 PF03710 Glutamate-ammonia ligase adenylyltransferase BA953_RS06620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS06620 PF00672 HAMP domain BA953_RS06625 PF07885 Ion channel BA953_RS06625 PF00027 Cyclic nucleotide-binding domain BA953_RS06630 PF01928 CYTH domain BA953_RS06635 PF01865 Protein of unknown function DUF47 BA953_RS06640 PF01384 Phosphate transporter family BA953_RS06645 PF08239 Bacterial SH3 domain BA953_RS06650 PF16537 Type II secretion system protein B BA953_RS06655 PF01471 Putative peptidoglycan binding domain BA953_RS06655 PF13401 AAA domain BA953_RS06660 PF12627 Probable RNA and SrmB- binding site of polymerase A BA953_RS06660 PF01966 HD domain BA953_RS06660 PF01743 Poly A polymerase head domain BA953_RS06665 PF03952 Enolase, N-terminal domain BA953_RS06665 PF00113 Enolase, C-terminal TIM barrel domain BA953_RS06670 PF00117 Glutamine amidotransferase class-I BA953_RS06670 PF06418 CTP synthase N-terminus BA953_RS06680 PF04607 Region found in RelA / SpoT proteins BA953_RS06680 PF13291 ACT domain BA953_RS06680 PF02824 TGS domain BA953_RS06685 PF01938 TRAM domain BA953_RS06685 PF05958 tRNA (Uracil-5-)-methyltransferase BA953_RS06690 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BA953_RS06690 PF00672 HAMP domain BA953_RS06690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS06690 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS06690 PF00072 Response regulator receiver domain BA953_RS06690 PF01627 Hpt domain BA953_RS06695 PF01648 4'-phosphopantetheinyl transferase superfamily BA953_RS06700 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BA953_RS06705 PF02565 Recombination protein O C terminal BA953_RS06705 PF11967 Recombination protein O N terminal BA953_RS06710 PF01926 50S ribosome-binding GTPase BA953_RS06710 PF07650 KH domain BA953_RS06715 PF14622 Ribonuclease-III-like BA953_RS06715 PF00035 Double-stranded RNA binding motif BA953_RS06720 PF10502 Signal peptidase, peptidase S26 BA953_RS06725 PF00679 Elongation factor G C-terminus BA953_RS06725 PF06421 GTP-binding protein LepA C-terminus BA953_RS06725 PF00009 Elongation factor Tu GTP binding domain BA953_RS06725 PF03144 Elongation factor Tu domain 2 BA953_RS06735 PF03888 MucB/RseB N-terminal domain BA953_RS06735 PF17188 MucB/RseB C-terminal domain BA953_RS06740 PF03872 Anti sigma-E protein RseA, N-terminal domain BA953_RS06740 PF03873 Anti sigma-E protein RseA, C-terminal domain BA953_RS06745 PF04542 Sigma-70 region 2 BA953_RS06745 PF08281 Sigma-70, region 4 BA953_RS06750 PF00890 FAD binding domain BA953_RS06750 PF02910 Fumarate reductase flavoprotein C-term BA953_RS06760 PF03937 Flavinator of succinate dehydrogenase BA953_RS06780 PF01494 FAD binding domain BA953_RS06785 PF01494 FAD binding domain BA953_RS06790 PF03695 Uncharacterised protein family (UPF0149) BA953_RS06795 PF05164 Cell division protein ZapA BA953_RS06805 PF01812 5-formyltetrahydrofolate cyclo-ligase family BA953_RS06810 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BA953_RS06815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA953_RS06815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA953_RS06815 PF01842 ACT domain BA953_RS06820 PF07690 Major Facilitator Superfamily BA953_RS06825 PF03009 Glycerophosphoryl diester phosphodiesterase family BA953_RS06830 PF10369 Small subunit of acetolactate synthase BA953_RS06835 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA953_RS06835 PF00205 Thiamine pyrophosphate enzyme, central domain BA953_RS06835 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA953_RS06840 PF00501 AMP-binding enzyme BA953_RS06845 PF03466 LysR substrate binding domain BA953_RS06845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS06865 PF08502 LeuA allosteric (dimerisation) domain BA953_RS06865 PF00682 HMGL-like BA953_RS06870 PF00180 Isocitrate/isopropylmalate dehydrogenase BA953_RS06875 PF00330 Aconitase family (aconitate hydratase) BA953_RS06950 PF02664 S-Ribosylhomocysteinase (LuxS) BA953_RS06960 PF04262 Glutamate-cysteine ligase BA953_RS06965 PF00675 Insulinase (Peptidase family M16) BA953_RS06965 PF05193 Peptidase M16 inactive domain BA953_RS06970 PF09335 SNARE associated Golgi protein BA953_RS06975 PF08240 Alcohol dehydrogenase GroES-like domain BA953_RS06975 PF00107 Zinc-binding dehydrogenase BA953_RS06980 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit BA953_RS06985 PF00364 Biotin-requiring enzyme BA953_RS06985 PF02436 Conserved carboxylase domain BA953_RS06985 PF00682 HMGL-like BA953_RS06990 PF04277 Oxaloacetate decarboxylase, gamma chain BA953_RS07035 PF02599 Global regulator protein family BA953_RS07040 PF13840 ACT domain BA953_RS07040 PF01842 ACT domain BA953_RS07040 PF00696 Amino acid kinase family BA953_RS07045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BA953_RS07045 PF02272 DHHA1 domain BA953_RS07045 PF01411 tRNA synthetases class II (A) BA953_RS07050 PF02631 RecX family BA953_RS07055 PF00154 recA bacterial DNA recombination protein BA953_RS07060 PF02464 Competence-damaged protein BA953_RS07065 PF05192 MutS domain III BA953_RS07065 PF05188 MutS domain II BA953_RS07065 PF00488 MutS domain V BA953_RS07065 PF05190 MutS family domain IV BA953_RS07065 PF01624 MutS domain I BA953_RS07070 PF03739 Lipopolysaccharide export system permease LptF/LptG BA953_RS07075 PF03739 Lipopolysaccharide export system permease LptF/LptG BA953_RS07080 PF00883 Cytosol aminopeptidase family, catalytic domain BA953_RS07080 PF02789 Cytosol aminopeptidase family, N-terminal domain BA953_RS07085 PF04364 DNA polymerase III chi subunit, HolC BA953_RS07090 PF00133 tRNA synthetases class I (I, L, M and V) BA953_RS07090 PF10458 Valyl tRNA synthetase tRNA binding arm BA953_RS07090 PF08264 Anticodon-binding domain of tRNA BA953_RS07100 PF05987 Bacterial protein of unknown function (DUF898) BA953_RS07110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA953_RS07110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BA953_RS07115 PF00849 RNA pseudouridylate synthase BA953_RS07125 PF18337 RapA N-terminal Tudor like domain BA953_RS07125 PF18339 RapA N-terminal Tudor like domain 1 BA953_RS07125 PF00176 SNF2 family N-terminal domain BA953_RS07125 PF12137 RNA polymerase recycling family C-terminal BA953_RS07125 PF00271 Helicase conserved C-terminal domain BA953_RS07130 PF02562 PhoH-like protein BA953_RS07130 PF13638 PIN domain BA953_RS07135 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA953_RS07135 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA953_RS07140 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA953_RS07140 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA953_RS07145 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BA953_RS07145 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BA953_RS07150 PF01042 Endoribonuclease L-PSP BA953_RS07160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA953_RS07160 PF00056 lactate/malate dehydrogenase, NAD binding domain BA953_RS07165 PF02863 Arginine repressor, C-terminal domain BA953_RS07165 PF01316 Arginine repressor, DNA binding domain BA953_RS07170 PF16868 NMT1-like family BA953_RS07180 PF00582 Universal stress protein family BA953_RS07195 PF06877 Regulator of ribonuclease activity B BA953_RS07205 PF01553 Acyltransferase BA953_RS07210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA953_RS07215 PF01722 BolA-like protein BA953_RS07225 PF05494 MlaC protein BA953_RS07230 PF02470 MlaD protein BA953_RS07235 PF02405 Permease MlaE BA953_RS07240 PF00005 ABC transporter BA953_RS07245 PF01699 Sodium/calcium exchanger protein BA953_RS07250 PF01380 SIS domain BA953_RS07250 PF00571 CBS domain BA953_RS07265 PF03968 OstA-like protein BA953_RS07270 PF12399 Branched-chain amino acid ATP-binding cassette transporter BA953_RS07270 PF00005 ABC transporter BA953_RS07275 PF04552 Sigma-54, DNA binding domain BA953_RS07275 PF00309 Sigma-54 factor, Activator interacting domain (AID) BA953_RS07275 PF04963 Sigma-54 factor, core binding domain BA953_RS07280 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BA953_RS07285 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA953_RS07290 PF03668 P-loop ATPase protein family BA953_RS07295 PF00381 PTS HPr component phosphorylation site BA953_RS07300 PF03448 MgtE intracellular N domain BA953_RS07300 PF01769 Divalent cation transporter BA953_RS07300 PF00571 CBS domain BA953_RS07305 PF02310 B12 binding domain BA953_RS07305 PF02574 Homocysteine S-methyltransferase BA953_RS07305 PF00809 Pterin binding enzyme BA953_RS07305 PF02607 B12 binding domain BA953_RS07305 PF02965 Vitamin B12 dependent methionine synthase, activation domain BA953_RS07310 PF00999 Sodium/hydrogen exchanger family BA953_RS07360 PF01507 Phosphoadenosine phosphosulfate reductase family BA953_RS07365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BA953_RS07365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BA953_RS07370 PF00667 FAD binding domain BA953_RS07370 PF00258 Flavodoxin BA953_RS07370 PF00175 Oxidoreductase NAD-binding domain BA953_RS07390 PF01207 Dihydrouridine synthase (Dus) BA953_RS07400 PF00072 Response regulator receiver domain BA953_RS07405 PF00072 Response regulator receiver domain BA953_RS07405 PF01627 Hpt domain BA953_RS07405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BA953_RS07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS07405 PF00672 HAMP domain BA953_RS07405 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS07410 PF01475 Ferric uptake regulator family BA953_RS07425 PF03600 Citrate transporter BA953_RS07425 PF02080 TrkA-C domain BA953_RS07430 PF00009 Elongation factor Tu GTP binding domain BA953_RS07435 PF01507 Phosphoadenosine phosphosulfate reductase family BA953_RS07440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA953_RS07440 PF10414 Sirohaem synthase dimerisation region BA953_RS07440 PF14824 Sirohaem biosynthesis protein central BA953_RS07445 PF02872 5'-nucleotidase, C-terminal domain BA953_RS07445 PF00149 Calcineurin-like phosphoesterase BA953_RS07455 PF13673 Acetyltransferase (GNAT) domain BA953_RS07470 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BA953_RS07470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA953_RS07480 PF01196 Ribosomal protein L17 BA953_RS07485 PF01000 RNA polymerase Rpb3/RpoA insert domain BA953_RS07485 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BA953_RS07485 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BA953_RS07490 PF00163 Ribosomal protein S4/S9 N-terminal domain BA953_RS07490 PF01479 S4 domain BA953_RS07495 PF00411 Ribosomal protein S11 BA953_RS07500 PF00416 Ribosomal protein S13/S18 BA953_RS07505 PF00444 Ribosomal protein L36 BA953_RS07510 PF00344 SecY translocase BA953_RS07515 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BA953_RS07520 PF00327 Ribosomal protein L30p/L7e BA953_RS07525 PF00333 Ribosomal protein S5, N-terminal domain BA953_RS07525 PF03719 Ribosomal protein S5, C-terminal domain BA953_RS07530 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BA953_RS07535 PF00347 Ribosomal protein L6 BA953_RS07540 PF00410 Ribosomal protein S8 BA953_RS07545 PF00253 Ribosomal protein S14p/S29e BA953_RS07550 PF00281 Ribosomal protein L5 BA953_RS07550 PF00673 ribosomal L5P family C-terminus BA953_RS07555 PF00467 KOW motif BA953_RS07555 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BA953_RS07560 PF00238 Ribosomal protein L14p/L23e BA953_RS07565 PF00366 Ribosomal protein S17 BA953_RS07570 PF00831 Ribosomal L29 protein BA953_RS07575 PF00252 Ribosomal protein L16p/L10e BA953_RS07580 PF00189 Ribosomal protein S3, C-terminal domain BA953_RS07580 PF07650 KH domain BA953_RS07585 PF00237 Ribosomal protein L22p/L17e BA953_RS07590 PF00203 Ribosomal protein S19 BA953_RS07595 PF00181 Ribosomal Proteins L2, RNA binding domain BA953_RS07595 PF03947 Ribosomal Proteins L2, C-terminal domain BA953_RS07600 PF00276 Ribosomal protein L23 BA953_RS07605 PF00573 Ribosomal protein L4/L1 family BA953_RS07610 PF00297 Ribosomal protein L3 BA953_RS07615 PF00338 Ribosomal protein S10p/S20e BA953_RS07620 PF00588 SpoU rRNA Methylase family BA953_RS07620 PF08032 RNA 2'-O ribose methyltransferase substrate binding BA953_RS07625 PF00773 RNB domain BA953_RS07625 PF00575 S1 RNA binding domain BA953_RS07625 PF17876 Cold shock domain BA953_RS07625 PF08461 Ribonuclease R winged-helix domain BA953_RS07625 PF08206 Ribonuclease B OB domain BA953_RS07630 PF01979 Amidohydrolase family BA953_RS07635 PF08238 Sel1 repeat BA953_RS07640 PF00709 Adenylosuccinate synthetase BA953_RS07645 PF01112 Asparaginase BA953_RS07650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA953_RS07660 PF00999 Sodium/hydrogen exchanger family BA953_RS07660 PF02254 TrkA-N domain BA953_RS07665 PF02525 Flavodoxin-like fold BA953_RS07670 PF12848 ABC transporter BA953_RS07670 PF00005 ABC transporter BA953_RS07680 PF00561 alpha/beta hydrolase fold BA953_RS07685 PF06794 Uncharacterised protein family (UPF0270) BA953_RS07690 PF00485 Phosphoribulokinase / Uridine kinase family BA953_RS07695 PF13545 Crp-like helix-turn-helix domain BA953_RS07695 PF00027 Cyclic nucleotide-binding domain BA953_RS07705 PF00171 Aldehyde dehydrogenase family BA953_RS07710 PF04958 Arginine N-succinyltransferase beta subunit BA953_RS07715 PF00202 Aminotransferase class-III BA953_RS07720 PF00117 Glutamine amidotransferase class-I BA953_RS07735 PF04186 FxsA cytoplasmic membrane protein BA953_RS07740 PF10415 Fumarase C C-terminus BA953_RS07740 PF00206 Lyase BA953_RS07745 PF03605 Anaerobic c4-dicarboxylate membrane transporter BA953_RS07750 PF03606 C4-dicarboxylate anaerobic carrier BA953_RS07760 PF00696 Amino acid kinase family BA953_RS07765 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA953_RS07765 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA953_RS07770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BA953_RS07770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BA953_RS07775 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BA953_RS07775 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BA953_RS07780 PF01316 Arginine repressor, DNA binding domain BA953_RS07780 PF02863 Arginine repressor, C-terminal domain BA953_RS07785 PF11412 Disulphide bond corrector protein DsbC BA953_RS07785 PF02683 Cytochrome C biogenesis protein transmembrane region BA953_RS07790 PF00072 Response regulator receiver domain BA953_RS07790 PF00196 Bacterial regulatory proteins, luxR family BA953_RS07795 PF01914 MarC family integral membrane protein BA953_RS07805 PF00474 Sodium:solute symporter family BA953_RS07815 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS07815 PF09308 LuxQ, periplasmic BA953_RS07815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS07815 PF00072 Response regulator receiver domain BA953_RS07820 PF12832 MFS_1 like family BA953_RS07835 PF13193 AMP-binding enzyme C-terminal domain BA953_RS07835 PF00501 AMP-binding enzyme BA953_RS07835 PF16177 Acetyl-coenzyme A synthetase N-terminus BA953_RS07840 PF01220 Dehydroquinase class II BA953_RS07845 PF00364 Biotin-requiring enzyme BA953_RS07850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA953_RS07850 PF00289 Biotin carboxylase, N-terminal domain BA953_RS07850 PF02785 Biotin carboxylase C-terminal domain BA953_RS07860 PF01207 Dihydrouridine synthase (Dus) BA953_RS07865 PF02954 Bacterial regulatory protein, Fis family BA953_RS07870 PF08448 PAS fold BA953_RS07870 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS07875 PF13411 MerR HTH family regulatory protein BA953_RS07880 PF01808 AICARFT/IMPCHase bienzyme BA953_RS07880 PF02142 MGS-like domain BA953_RS07885 PF02843 Phosphoribosylglycinamide synthetase, C domain BA953_RS07885 PF02844 Phosphoribosylglycinamide synthetase, N domain BA953_RS07885 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BA953_RS07895 PF00216 Bacterial DNA-binding protein BA953_RS07900 PF00571 CBS domain BA953_RS07900 PF01595 Cyclin M transmembrane N-terminal domain BA953_RS07905 PF04222 Protein of unknown function (DUF416) BA953_RS07910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BA953_RS07915 PF03167 Uracil DNA glycosylase superfamily BA953_RS07920 PF00311 Phosphoenolpyruvate carboxylase BA953_RS07925 PF03551 Transcriptional regulator PadR-like family BA953_RS07925 PF10400 Virulence activator alpha C-term BA953_RS07930 PF00132 Bacterial transferase hexapeptide (six repeats) BA953_RS07930 PF06426 Serine acetyltransferase, N-terminal BA953_RS07935 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BA953_RS07935 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BA953_RS07940 PF02556 Preprotein translocase subunit SecB BA953_RS07945 PF00581 Rhodanese-like domain BA953_RS07970 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF BA953_RS07980 PF06082 Exopolysaccharide biosynthesis protein YbjH BA953_RS07985 PF00152 tRNA synthetases class II (D, K and N) BA953_RS07990 PF02910 Fumarate reductase flavoprotein C-term BA953_RS07990 PF00890 FAD binding domain BA953_RS07995 PF13183 4Fe-4S dicluster domain BA953_RS07995 PF13085 2Fe-2S iron-sulfur cluster binding domain BA953_RS08000 PF02300 Fumarate reductase subunit C BA953_RS08005 PF02313 Fumarate reductase subunit D BA953_RS08015 PF07724 AAA domain (Cdc48 subfamily) BA953_RS08015 PF00004 ATPase family associated with various cellular activities (AAA) BA953_RS08020 PF00227 Proteasome subunit BA953_RS08025 PF05036 Sporulation related domain BA953_RS08030 PF00356 Bacterial regulatory proteins, lacI family BA953_RS08035 PF17764 3′ DNA-binding domain (3′BD) BA953_RS08035 PF00270 DEAD/DEAH box helicase BA953_RS08035 PF18074 Primosomal protein N C-terminal domain BA953_RS08035 PF00271 Helicase conserved C-terminal domain BA953_RS08035 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BA953_RS08040 PF01197 Ribosomal protein L31 BA953_RS08045 PF00390 Malic enzyme, N-terminal domain BA953_RS08045 PF03949 Malic enzyme, NAD binding domain BA953_RS08050 PF01340 Met Apo-repressor, MetJ BA953_RS08055 PF01053 Cys/Met metabolism PLP-dependent enzyme BA953_RS08060 PF03447 Homoserine dehydrogenase, NAD binding domain BA953_RS08060 PF00742 Homoserine dehydrogenase BA953_RS08060 PF00696 Amino acid kinase family BA953_RS08065 PF02219 Methylenetetrahydrofolate reductase BA953_RS08070 PF06005 Cell division protein ZapB BA953_RS08075 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BA953_RS08090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BA953_RS08090 PF01348 Type II intron maturase BA953_RS08095 PF00118 TCP-1/cpn60 chaperonin family BA953_RS08100 PF00166 Chaperonin 10 Kd subunit BA953_RS08105 PF02706 Chain length determinant protein BA953_RS08120 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BA953_RS08120 PF01565 FAD binding domain BA953_RS08125 PF02237 Biotin protein ligase C terminal domain BA953_RS08125 PF08279 HTH domain BA953_RS08125 PF03099 Biotin/lipoate A/B protein ligase family BA953_RS08130 PF13091 PLD-like domain BA953_RS08135 PF00953 Glycosyl transferase family 4 BA953_RS08150 PF07940 Heparinase II/III-like protein BA953_RS08150 PF16889 Heparinase II/III N-terminus BA953_RS08155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA953_RS08155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA953_RS08160 PF00977 Histidine biosynthesis protein BA953_RS08165 PF00117 Glutamine amidotransferase class-I BA953_RS08175 PF00534 Glycosyl transferases group 1 BA953_RS08175 PF13439 Glycosyltransferase Family 4 BA953_RS08185 PF13537 Glutamine amidotransferase domain BA953_RS08185 PF00733 Asparagine synthase BA953_RS08200 PF01370 NAD dependent epimerase/dehydratase family BA953_RS08205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BA953_RS08210 PF16363 GDP-mannose 4,6 dehydratase BA953_RS08215 PF00483 Nucleotidyl transferase BA953_RS08220 PF00175 Oxidoreductase NAD-binding domain BA953_RS08220 PF00111 2Fe-2S iron-sulfur cluster binding domain BA953_RS08220 PF00970 Oxidoreductase FAD-binding domain BA953_RS08225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BA953_RS08225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BA953_RS08225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BA953_RS08230 PF02350 UDP-N-acetylglucosamine 2-epimerase BA953_RS08240 PF01370 NAD dependent epimerase/dehydratase family BA953_RS08245 PF00534 Glycosyl transferases group 1 BA953_RS08255 PF00132 Bacterial transferase hexapeptide (six repeats) BA953_RS08255 PF12464 Maltose acetyltransferase BA953_RS08255 PF14602 Hexapeptide repeat of succinyl-transferase BA953_RS08260 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BA953_RS08270 PF04488 Glycosyltransferase sugar-binding region containing DXD motif BA953_RS08275 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BA953_RS08295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BA953_RS08300 PF00535 Glycosyl transferase family 2 BA953_RS08305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BA953_RS08310 PF01467 Cytidylyltransferase-like BA953_RS08315 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BA953_RS08315 PF06827 Zinc finger found in FPG and IleRS BA953_RS08315 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BA953_RS08325 PF00471 Ribosomal protein L33 BA953_RS08330 PF00830 Ribosomal L28 family BA953_RS08335 PF04002 RadC-like JAB domain BA953_RS08340 PF02441 Flavoprotein BA953_RS08340 PF04127 DNA / pantothenate metabolism flavoprotein BA953_RS08345 PF00440 Bacterial regulatory proteins, tetR family BA953_RS08350 PF03279 Bacterial lipid A biosynthesis acyltransferase BA953_RS08355 PF03279 Bacterial lipid A biosynthesis acyltransferase BA953_RS08360 PF00156 Phosphoribosyl transferase domain BA953_RS08365 PF03725 3' exoribonuclease family, domain 2 BA953_RS08365 PF01138 3' exoribonuclease family, domain 1 BA953_RS08370 PF03755 YicC-like family, N-terminal region BA953_RS08370 PF08340 Domain of unknown function (DUF1732) BA953_RS08375 PF00860 Permease family BA953_RS08385 PF02472 Biopolymer transport protein ExbD/TolR BA953_RS08390 PF01618 MotA/TolQ/ExbB proton channel family BA953_RS08405 PF00593 TonB dependent receptor BA953_RS08405 PF07715 TonB-dependent Receptor Plug Domain BA953_RS08415 PF04542 Sigma-70 region 2 BA953_RS08415 PF08281 Sigma-70, region 4 BA953_RS08420 PF00625 Guanylate kinase BA953_RS08425 PF01192 RNA polymerase Rpb6 BA953_RS08430 PF02824 TGS domain BA953_RS08430 PF04607 Region found in RelA / SpoT proteins BA953_RS08430 PF13291 ACT domain BA953_RS08435 PF00588 SpoU rRNA Methylase family BA953_RS08435 PF12105 SpoU, rRNA methylase, C-terminal BA953_RS08440 PF17191 RecG wedge domain BA953_RS08440 PF00270 DEAD/DEAH box helicase BA953_RS08440 PF00271 Helicase conserved C-terminal domain BA953_RS08445 PF00459 Inositol monophosphatase family BA953_RS08450 PF00293 NUDIX domain BA953_RS08455 PF01521 Iron-sulphur cluster biosynthesis BA953_RS08455 PF01106 NifU-like domain BA953_RS08460 PF00156 Phosphoribosyl transferase domain BA953_RS08465 PF00561 alpha/beta hydrolase fold BA953_RS08475 PF09371 Tex-like protein N-terminal domain BA953_RS08475 PF17674 HHH domain BA953_RS08475 PF00575 S1 RNA binding domain BA953_RS08475 PF16921 Tex protein YqgF-like domain BA953_RS08485 PF01272 Transcription elongation factor, GreA/GreB, C-term BA953_RS08485 PF03449 Transcription elongation factor, N-terminal BA953_RS08490 PF00486 Transcriptional regulatory protein, C terminal BA953_RS08490 PF00072 Response regulator receiver domain BA953_RS08495 PF00672 HAMP domain BA953_RS08495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS08495 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS08505 PF04612 Type II secretion system (T2SS), protein M BA953_RS08510 PF05134 Type II secretion system (T2SS), protein L BA953_RS08510 PF12693 GspL periplasmic domain BA953_RS08515 PF03934 Type II secretion system (T2SS), protein K BA953_RS08520 PF07963 Prokaryotic N-terminal methylation motif BA953_RS08520 PF11612 Type II secretion system (T2SS), protein J BA953_RS08525 PF07963 Prokaryotic N-terminal methylation motif BA953_RS08525 PF02501 Type II secretion system (T2SS), protein I BA953_RS08530 PF12019 Type II transport protein GspH BA953_RS08535 PF08334 Type II secretion system (T2SS), protein G BA953_RS08535 PF07963 Prokaryotic N-terminal methylation motif BA953_RS08540 PF00482 Type II secretion system (T2SS), protein F BA953_RS08545 PF00437 Type II/IV secretion system protein BA953_RS08550 PF03958 Bacterial type II/III secretion system short domain BA953_RS08550 PF00263 Bacterial type II and III secretion system protein BA953_RS08555 PF11356 Type II secretion system protein C BA953_RS08560 PF01479 S4 domain BA953_RS08565 PF01430 Hsp33 protein BA953_RS08570 PF01293 Phosphoenolpyruvate carboxykinase BA953_RS08580 PF09500 Putative thioesterase (yiiD_Cterm) BA953_RS08580 PF00583 Acetyltransferase (GNAT) family BA953_RS08585 PF02580 D-Tyr-tRNA(Tyr) deacylase BA953_RS08590 PF03631 Virulence factor BrkB BA953_RS08600 PF03144 Elongation factor Tu domain 2 BA953_RS08600 PF00679 Elongation factor G C-terminus BA953_RS08600 PF00009 Elongation factor Tu GTP binding domain BA953_RS08605 PF03951 Glutamine synthetase, beta-Grasp domain BA953_RS08605 PF00120 Glutamine synthetase, catalytic domain BA953_RS08610 PF00989 PAS fold BA953_RS08610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS08610 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS08615 PF00158 Sigma-54 interaction domain BA953_RS08615 PF00072 Response regulator receiver domain BA953_RS08615 PF02954 Bacterial regulatory protein, Fis family BA953_RS08620 PF00563 EAL domain BA953_RS08620 PF03707 Bacterial signalling protein N terminal repeat BA953_RS08620 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS08625 PF00962 Adenosine/AMP deaminase BA953_RS08665 PF00132 Bacterial transferase hexapeptide (six repeats) BA953_RS08670 PF07369 Protein of unknown function (DUF1488) BA953_RS08675 PF01488 Shikimate / quinate 5-dehydrogenase BA953_RS08675 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BA953_RS08675 PF08501 Shikimate dehydrogenase substrate binding domain BA953_RS08680 PF01218 Coproporphyrinogen III oxidase BA953_RS08685 PF01300 Telomere recombination BA953_RS08690 PF00731 AIR carboxylase BA953_RS08695 PF02222 ATP-grasp domain BA953_RS08695 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BA953_RS08700 PF01396 Topoisomerase DNA binding C4 zinc finger BA953_RS08705 PF04361 Protein of unknown function (DUF494) BA953_RS08710 PF02481 DNA recombination-mediator protein A BA953_RS08710 PF17782 DprA winged helix domain BA953_RS08715 PF01327 Polypeptide deformylase BA953_RS08720 PF02911 Formyl transferase, C-terminal domain BA953_RS08720 PF00551 Formyl transferase BA953_RS08725 PF01189 16S rRNA methyltransferase RsmB/F BA953_RS08725 PF01029 NusB family BA953_RS08730 PF02254 TrkA-N domain BA953_RS08730 PF02080 TrkA-C domain BA953_RS08735 PF02386 Cation transport protein BA953_RS08745 PF03006 Haemolysin-III related BA953_RS08750 PF07070 SpoOM protein BA953_RS08760 PF06288 Protein of unknown function (DUF1040) BA953_RS08765 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase BA953_RS08765 PF12801 4Fe-4S binding domain BA953_RS08765 PF13746 4Fe-4S dicluster domain BA953_RS08880 PF00717 Peptidase S24-like BA953_RS08880 PF01381 Helix-turn-helix BA953_RS08885 PF02899 Phage integrase, N-terminal SAM-like domain BA953_RS08885 PF00589 Phage integrase family BA953_RS08890 PF01636 Phosphotransferase enzyme family BA953_RS08895 PF01323 DSBA-like thioredoxin domain BA953_RS08900 PF01609 Transposase DDE domain BA953_RS08900 PF13006 Insertion element 4 transposase N-terminal BA953_RS08905 PF01553 Acyltransferase BA953_RS08915 PF13335 Magnesium chelatase, subunit ChlI C-terminal BA953_RS08915 PF01078 Magnesium chelatase, subunit ChlI BA953_RS08920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA953_RS08920 PF00205 Thiamine pyrophosphate enzyme, central domain BA953_RS08920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA953_RS08930 PF01063 Amino-transferase class IV BA953_RS08935 PF00920 Dehydratase family BA953_RS08940 PF00585 C-terminal regulatory domain of Threonine dehydratase BA953_RS08940 PF00291 Pyridoxal-phosphate dependent enzyme BA953_RS08945 PF00107 Zinc-binding dehydrogenase BA953_RS08945 PF08240 Alcohol dehydrogenase GroES-like domain BA953_RS08950 PF03466 LysR substrate binding domain BA953_RS08950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS08960 PF01206 Sulfurtransferase TusA BA953_RS08970 PF01169 Uncharacterized protein family UPF0016 BA953_RS08975 PF02091 Glycyl-tRNA synthetase alpha subunit BA953_RS08980 PF02092 Glycyl-tRNA synthetase beta subunit BA953_RS08980 PF05746 DALR anticodon binding domain BA953_RS08985 PF00155 Aminotransferase class I and II BA953_RS08990 PF00011 Hsp20/alpha crystallin family BA953_RS08995 PF00204 DNA gyrase B BA953_RS08995 PF01751 Toprim domain BA953_RS08995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS08995 PF00986 DNA gyrase B subunit, carboxyl terminus BA953_RS08995 PF18053 DNA gyrase B subunit insert domain BA953_RS09000 PF02463 RecF/RecN/SMC N terminal domain BA953_RS09005 PF00712 DNA polymerase III beta subunit, N-terminal domain BA953_RS09005 PF02768 DNA polymerase III beta subunit, C-terminal domain BA953_RS09005 PF02767 DNA polymerase III beta subunit, central domain BA953_RS09010 PF00308 Bacterial dnaA protein BA953_RS09010 PF11638 DnaA N-terminal domain BA953_RS09010 PF08299 Bacterial dnaA protein helix-turn-helix BA953_RS09015 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA953_RS09020 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS09025 PF00005 ABC transporter BA953_RS09030 PF00468 Ribosomal protein L34 BA953_RS09035 PF00825 Ribonuclease P BA953_RS09040 PF02096 60Kd inner membrane protein BA953_RS09040 PF14849 YidC periplasmic domain BA953_RS09045 PF12631 MnmE helical domain BA953_RS09045 PF10396 GTP-binding protein TrmE N-terminus BA953_RS09045 PF01926 50S ribosome-binding GTPase BA953_RS09050 PF00258 Flavodoxin BA953_RS09055 PF13932 GidA associated domain BA953_RS09055 PF01134 Glucose inhibited division protein A BA953_RS09060 PF02527 rRNA small subunit methyltransferase G BA953_RS09065 PF13614 AAA domain BA953_RS09070 PF02195 ParB-like nuclease domain BA953_RS09070 PF17762 HTH domain found in ParB protein BA953_RS09075 PF03899 ATP synthase I chain BA953_RS09080 PF00119 ATP synthase A chain BA953_RS09085 PF00137 ATP synthase subunit C BA953_RS09090 PF00430 ATP synthase B/B' CF(0) BA953_RS09095 PF00213 ATP synthase delta (OSCP) subunit BA953_RS09100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA953_RS09100 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA953_RS09100 PF00306 ATP synthase alpha/beta chain, C terminal domain BA953_RS09105 PF00231 ATP synthase BA953_RS09110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA953_RS09110 PF02874 ATP synthase alpha/beta family, beta-barrel domain BA953_RS09115 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BA953_RS09115 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BA953_RS09120 PF12804 MobA-like NTP transferase domain BA953_RS09120 PF00132 Bacterial transferase hexapeptide (six repeats) BA953_RS09125 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS09130 PF00497 Bacterial extracellular solute-binding proteins, family 3 BA953_RS09135 PF07690 Major Facilitator Superfamily BA953_RS09140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS09140 PF03466 LysR substrate binding domain BA953_RS09145 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS09150 PF00108 Thiolase, N-terminal domain BA953_RS09150 PF02803 Thiolase, C-terminal domain BA953_RS09155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BA953_RS09155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BA953_RS09155 PF00378 Enoyl-CoA hydratase/isomerase BA953_RS09160 PF01205 Uncharacterized protein family UPF0029 BA953_RS09160 PF09186 Domain of unknown function (DUF1949) BA953_RS09165 PF02386 Cation transport protein BA953_RS09170 PF12724 Flavodoxin domain BA953_RS09220 PF00394 Multicopper oxidase BA953_RS09220 PF07731 Multicopper oxidase BA953_RS09220 PF07732 Multicopper oxidase BA953_RS09225 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BA953_RS09230 PF01964 Radical SAM ThiC family BA953_RS09230 PF13667 ThiC-associated domain BA953_RS09235 PF02581 Thiamine monophosphate synthase BA953_RS09240 PF00899 ThiF family BA953_RS09250 PF05690 Thiazole biosynthesis protein ThiG BA953_RS09255 PF06968 Biotin and Thiamin Synthesis associated domain BA953_RS09255 PF04055 Radical SAM superfamily BA953_RS09260 PF00557 Metallopeptidase family M24 BA953_RS09260 PF01321 Creatinase/Prolidase N-terminal domain BA953_RS09260 PF00557 Metallopeptidase family M24 BA953_RS09260 PF01321 Creatinase/Prolidase N-terminal domain BA953_RS09265 PF03466 LysR substrate binding domain BA953_RS09265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS09270 PF07690 Major Facilitator Superfamily BA953_RS09280 PF01037 Lrp/AsnC ligand binding domain BA953_RS09285 PF00563 EAL domain BA953_RS09285 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS09285 PF08448 PAS fold BA953_RS09290 PF04445 Putative SAM-dependent methyltransferase BA953_RS09300 PF00892 EamA-like transporter family BA953_RS09305 PF00582 Universal stress protein family BA953_RS09310 PF00210 Ferritin-like domain BA953_RS09315 PF10625 Universal stress protein B (UspB) BA953_RS09325 PF03440 Aerolysin/Pertussis toxin (APT) domain BA953_RS09325 PF01117 Aerolysin toxin BA953_RS09345 PF12852 Cupin BA953_RS09345 PF12833 Helix-turn-helix domain BA953_RS09350 PF08668 HDOD domain BA953_RS09360 PF02646 RmuC family BA953_RS09365 PF01209 ubiE/COQ5 methyltransferase family BA953_RS09370 PF02036 SCP-2 sterol transfer family BA953_RS09375 PF03109 ABC1 family BA953_RS09380 PF02416 mttA/Hcf106 family BA953_RS09385 PF02416 mttA/Hcf106 family BA953_RS09390 PF00902 Sec-independent protein translocase protein (TatC) BA953_RS09395 PF01026 TatD related DNase BA953_RS09400 PF00490 Delta-aminolevulinic acid dehydratase BA953_RS09410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BA953_RS09410 PF00476 DNA polymerase family A BA953_RS09410 PF01367 5'-3' exonuclease, C-terminal SAM fold BA953_RS09410 PF01612 3'-5' exonuclease BA953_RS09415 PF01926 50S ribosome-binding GTPase BA953_RS09420 PF00034 Cytochrome c BA953_RS09430 PF04220 Der GTPase activator (YihI) BA953_RS09435 PF10675 Protein of unknown function (DUF2489) BA953_RS09440 PF06969 HemN C-terminal domain BA953_RS09440 PF04055 Radical SAM superfamily BA953_RS09445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS09445 PF03466 LysR substrate binding domain BA953_RS09450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BA953_RS09450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BA953_RS09455 PF04380 Membrane fusogenic activity BA953_RS09460 PF00873 AcrB/AcrD/AcrF family BA953_RS09465 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA953_RS09470 PF00440 Bacterial regulatory proteins, tetR family BA953_RS09475 PF00580 UvrD/REP helicase N-terminal domain BA953_RS09475 PF13361 UvrD-like helicase C-terminal domain BA953_RS09480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BA953_RS09510 PF00005 ABC transporter BA953_RS09510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA953_RS09515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA953_RS09520 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS09525 PF12911 N-terminal TM domain of oligopeptide transport permease C BA953_RS09525 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS09540 PF00072 Response regulator receiver domain BA953_RS09540 PF00486 Transcriptional regulatory protein, C terminal BA953_RS09555 PF00083 Sugar (and other) transporter BA953_RS09565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA953_RS09565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BA953_RS09575 PF07971 Glycosyl hydrolase family 92 BA953_RS09575 PF17678 Glycosyl hydrolase family 92 N-terminal domain BA953_RS09585 PF17678 Glycosyl hydrolase family 92 N-terminal domain BA953_RS09585 PF07971 Glycosyl hydrolase family 92 BA953_RS09590 PF12833 Helix-turn-helix domain BA953_RS09600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BA953_RS09610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA953_RS09610 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS09615 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BA953_RS09620 PF01432 Peptidase family M3 BA953_RS09635 PF05114 Protein of unknown function (DUF692) BA953_RS09645 PF00580 UvrD/REP helicase N-terminal domain BA953_RS09645 PF13361 UvrD-like helicase C-terminal domain BA953_RS09655 PF08534 Redoxin BA953_RS09665 PF01810 LysE type translocator BA953_RS09675 PF00892 EamA-like transporter family BA953_RS09680 PF16124 RecQ zinc-binding BA953_RS09680 PF00270 DEAD/DEAH box helicase BA953_RS09680 PF00271 Helicase conserved C-terminal domain BA953_RS09680 PF00570 HRDC domain BA953_RS09680 PF09382 RQC domain BA953_RS09690 PF02592 Putative vitamin uptake transporter BA953_RS09695 PF02541 Ppx/GppA phosphatase family BA953_RS09700 PF00271 Helicase conserved C-terminal domain BA953_RS09700 PF00270 DEAD/DEAH box helicase BA953_RS09705 PF00085 Thioredoxin BA953_RS09710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA953_RS09710 PF07498 Rho termination factor, N-terminal domain BA953_RS09710 PF07497 Rho termination factor, RNA-binding domain BA953_RS09720 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BA953_RS09725 PF00970 Oxidoreductase FAD-binding domain BA953_RS09725 PF00111 2Fe-2S iron-sulfur cluster binding domain BA953_RS09725 PF00175 Oxidoreductase NAD-binding domain BA953_RS09730 PF00175 Oxidoreductase NAD-binding domain BA953_RS09780 PF07219 HemY protein N-terminus BA953_RS09785 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BA953_RS09790 PF02602 Uroporphyrinogen-III synthase HemD BA953_RS09795 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BA953_RS09795 PF03900 Porphobilinogen deaminase, C-terminal domain BA953_RS09800 PF12633 Adenylate cyclase NT domain BA953_RS09800 PF01295 Adenylate cyclase, class-I BA953_RS09805 PF01491 Frataxin-like domain BA953_RS09815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BA953_RS09815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BA953_RS09820 PF01678 Diaminopimelate epimerase BA953_RS09830 PF02899 Phage integrase, N-terminal SAM-like domain BA953_RS09830 PF00589 Phage integrase family BA953_RS09835 PF13419 Haloacid dehalogenase-like hydrolase BA953_RS09840 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS09840 PF08495 FIST N domain BA953_RS09840 PF00563 EAL domain BA953_RS09840 PF10442 FIST C domain BA953_RS09845 PF03942 DTW domain BA953_RS09870 PF01810 LysE type translocator BA953_RS09875 PF08668 HDOD domain BA953_RS09875 PF00563 EAL domain BA953_RS09880 PF01022 Bacterial regulatory protein, arsR family BA953_RS09885 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA953_RS09885 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA953_RS09930 PF01914 MarC family integral membrane protein BA953_RS09945 PF02881 SRP54-type protein, helical bundle domain BA953_RS09945 PF00448 SRP54-type protein, GTPase domain BA953_RS09950 PF00005 ABC transporter BA953_RS09955 PF18075 FtsX extracellular domain BA953_RS09960 PF04545 Sigma-70, region 4 BA953_RS09960 PF04542 Sigma-70 region 2 BA953_RS09960 PF00140 Sigma-70 factor, region 1.2 BA953_RS09965 PF00581 Rhodanese-like domain BA953_RS09970 PF01694 Rhomboid family BA953_RS09970 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BA953_RS09975 PF03748 Flagellar basal body-associated protein FliL BA953_RS09980 PF04345 Chorismate lyase BA953_RS09985 PF01040 UbiA prenyltransferase family BA953_RS09990 PF01553 Acyltransferase BA953_RS09995 PF01219 Prokaryotic diacylglycerol kinase BA953_RS10000 PF00717 Peptidase S24-like BA953_RS10000 PF01726 LexA DNA binding domain BA953_RS10010 PF01554 MatE BA953_RS10015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA953_RS10015 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS10020 PF00440 Bacterial regulatory proteins, tetR family BA953_RS10030 PF05958 tRNA (Uracil-5-)-methyltransferase BA953_RS10035 PF00593 TonB dependent receptor BA953_RS10035 PF07715 TonB-dependent Receptor Plug Domain BA953_RS10045 PF01177 Asp/Glu/Hydantoin racemase BA953_RS10135 PF01546 Peptidase family M20/M25/M40 BA953_RS10135 PF07687 Peptidase dimerisation domain BA953_RS10140 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA953_RS10140 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA953_RS10145 PF00696 Amino acid kinase family BA953_RS10150 PF00764 Arginosuccinate synthase BA953_RS10155 PF00206 Lyase BA953_RS10155 PF00583 Acetyltransferase (GNAT) family BA953_RS10155 PF14698 Argininosuccinate lyase C-terminal BA953_RS10165 PF01042 Endoribonuclease L-PSP BA953_RS10170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA953_RS10170 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS10175 PF08534 Redoxin BA953_RS10175 PF00462 Glutaredoxin BA953_RS10180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS10180 PF03466 LysR substrate binding domain BA953_RS10185 PF17092 Penicillin-binding protein OB-like domain BA953_RS10185 PF00912 Transglycosylase BA953_RS10185 PF00905 Penicillin binding protein transpeptidase domain BA953_RS10210 PF11741 AMIN domain BA953_RS10210 PF07660 Secretin and TonB N terminus short domain BA953_RS10210 PF03958 Bacterial type II/III secretion system short domain BA953_RS10210 PF00263 Bacterial type II and III secretion system protein BA953_RS10215 PF01202 Shikimate kinase BA953_RS10220 PF01761 3-dehydroquinate synthase BA953_RS10230 PF02086 D12 class N6 adenine-specific DNA methyltransferase BA953_RS10235 PF00834 Ribulose-phosphate 3 epimerase family BA953_RS10240 PF13419 Haloacid dehalogenase-like hydrolase BA953_RS10245 PF00579 tRNA synthetases class I (W and Y) BA953_RS10250 PF00588 SpoU rRNA Methylase family BA953_RS10255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BA953_RS10255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BA953_RS10260 PF16527 Two-component sensor protein CpxA, periplasmic domain BA953_RS10260 PF00672 HAMP domain BA953_RS10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS10260 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS10265 PF00486 Transcriptional regulatory protein, C terminal BA953_RS10265 PF00072 Response regulator receiver domain BA953_RS10270 PF07813 LTXXQ motif family protein BA953_RS10275 PF01545 Cation efflux family BA953_RS10275 PF16916 Dimerisation domain of Zinc Transporter BA953_RS10280 PF00365 Phosphofructokinase BA953_RS10285 PF02308 MgtC family BA953_RS10295 PF04055 Radical SAM superfamily BA953_RS10300 PF01132 Elongation factor P (EF-P) OB domain BA953_RS10300 PF08207 Elongation factor P (EF-P) KOW-like domain BA953_RS10300 PF09285 Elongation factor P, C-terminal BA953_RS10305 PF01040 UbiA prenyltransferase family BA953_RS10310 PF03737 Aldolase/RraA BA953_RS10315 PF01554 MatE BA953_RS10320 PF00121 Triosephosphate isomerase BA953_RS10335 PF00485 Phosphoribulokinase / Uridine kinase family BA953_RS10360 PF03143 Elongation factor Tu C-terminal domain BA953_RS10360 PF00009 Elongation factor Tu GTP binding domain BA953_RS10360 PF03144 Elongation factor Tu domain 2 BA953_RS10370 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BA953_RS10375 PF00467 KOW motif BA953_RS10375 PF02357 Transcription termination factor nusG BA953_RS10380 PF03946 Ribosomal protein L11, N-terminal domain BA953_RS10380 PF00298 Ribosomal protein L11, RNA binding domain BA953_RS10385 PF00687 Ribosomal protein L1p/L10e family BA953_RS10390 PF00466 Ribosomal protein L10 BA953_RS10395 PF16320 Ribosomal protein L7/L12 dimerisation domain BA953_RS10395 PF00542 Ribosomal protein L7/L12 C-terminal domain BA953_RS10400 PF04560 RNA polymerase Rpb2, domain 7 BA953_RS10400 PF00562 RNA polymerase Rpb2, domain 6 BA953_RS10400 PF10385 RNA polymerase beta subunit external 1 domain BA953_RS10400 PF04565 RNA polymerase Rpb2, domain 3 BA953_RS10400 PF04561 RNA polymerase Rpb2, domain 2 BA953_RS10400 PF04563 RNA polymerase beta subunit BA953_RS10405 PF00623 RNA polymerase Rpb1, domain 2 BA953_RS10405 PF04997 RNA polymerase Rpb1, domain 1 BA953_RS10405 PF05000 RNA polymerase Rpb1, domain 4 BA953_RS10405 PF04998 RNA polymerase Rpb1, domain 5 BA953_RS10405 PF04983 RNA polymerase Rpb1, domain 3 BA953_RS10410 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BA953_RS10415 PF09297 NADH pyrophosphatase zinc ribbon domain BA953_RS10415 PF00293 NUDIX domain BA953_RS10420 PF01208 Uroporphyrinogen decarboxylase (URO-D) BA953_RS10425 PF08360 QacR-like protein, C-terminal region BA953_RS10425 PF00440 Bacterial regulatory proteins, tetR family BA953_RS10435 PF01551 Peptidase family M23 BA953_RS10440 PF01676 Metalloenzyme superfamily BA953_RS10440 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BA953_RS10450 PF00672 HAMP domain BA953_RS10450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS10450 PF17200 Single Cache domain 2 BA953_RS10455 PF03600 Citrate transporter BA953_RS10455 PF02080 TrkA-C domain BA953_RS10460 PF02666 Phosphatidylserine decarboxylase BA953_RS10465 PF03193 RsgA GTPase BA953_RS10470 PF00929 Exonuclease BA953_RS10525 PF08331 Domain of unknown function (DUF1730) BA953_RS10530 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BA953_RS10535 PF01520 N-acetylmuramoyl-L-alanine amidase BA953_RS10540 PF01119 DNA mismatch repair protein, C-terminal domain BA953_RS10540 PF08676 MutL C terminal dimerisation domain BA953_RS10550 PF17209 Hfq protein BA953_RS10555 PF01926 50S ribosome-binding GTPase BA953_RS10555 PF13167 GTP-binding GTPase N-terminal BA953_RS10555 PF16360 GTP-binding GTPase Middle Region BA953_RS10560 PF01145 SPFH domain / Band 7 family BA953_RS10560 PF12221 Bacterial membrane protein N terminal BA953_RS10565 PF01145 SPFH domain / Band 7 family BA953_RS10570 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BA953_RS10575 PF04102 SlyX BA953_RS10585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BA953_RS10585 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BA953_RS10590 PF08348 YheO-like PAS domain BA953_RS10590 PF13309 HTH domain BA953_RS10595 PF02635 DsrE/DsrF-like family BA953_RS10600 PF02635 DsrE/DsrF-like family BA953_RS10605 PF04077 DsrH like protein BA953_RS10610 PF00164 Ribosomal protein S12/S23 BA953_RS10615 PF00177 Ribosomal protein S7p/S5e BA953_RS10620 PF14492 Elongation Factor G, domain II BA953_RS10620 PF00679 Elongation factor G C-terminus BA953_RS10620 PF03764 Elongation factor G, domain IV BA953_RS10620 PF03144 Elongation factor Tu domain 2 BA953_RS10620 PF00009 Elongation factor Tu GTP binding domain BA953_RS10625 PF03143 Elongation factor Tu C-terminal domain BA953_RS10625 PF03144 Elongation factor Tu domain 2 BA953_RS10625 PF00009 Elongation factor Tu GTP binding domain BA953_RS10630 PF00210 Ferritin-like domain BA953_RS10635 PF01250 Ribosomal protein S6 BA953_RS10640 PF01084 Ribosomal protein S18 BA953_RS10645 PF01281 Ribosomal protein L9, N-terminal domain BA953_RS10645 PF03948 Ribosomal protein L9, C-terminal domain BA953_RS10655 PF03796 DnaB-like helicase C terminal domain BA953_RS10655 PF00772 DnaB-like helicase N terminal domain BA953_RS10660 PF00842 Alanine racemase, C-terminal domain BA953_RS10660 PF01168 Alanine racemase, N-terminal domain BA953_RS10665 PF01894 Uncharacterised protein family UPF0047 BA953_RS10670 PF00342 Phosphoglucose isomerase BA953_RS10690 PF00005 ABC transporter BA953_RS10705 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BA953_RS10715 PF01625 Peptide methionine sulfoxide reductase BA953_RS10720 PF01103 Surface antigen BA953_RS10720 PF07244 Surface antigen variable number repeat BA953_RS10720 PF17243 POTRA domain TamA domain 1 BA953_RS10725 PF04357 TamB, inner membrane protein subunit of TAM complex BA953_RS10730 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BA953_RS10735 PF00719 Inorganic pyrophosphatase BA953_RS10740 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BA953_RS10745 PF08245 Mur ligase middle domain BA953_RS10745 PF01225 Mur ligase family, catalytic domain BA953_RS10745 PF02875 Mur ligase family, glutamate ligase domain BA953_RS10750 PF02441 Flavoprotein BA953_RS10760 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS10765 PF00005 ABC transporter BA953_RS10770 PF04751 Protein of unknown function (DUF615) BA953_RS10775 PF01523 Putative modulator of DNA gyrase BA953_RS10780 PF00696 Amino acid kinase family BA953_RS10780 PF01842 ACT domain BA953_RS10785 PF00266 Aminotransferase class-V BA953_RS10795 PF17755 UvrA DNA-binding domain BA953_RS10795 PF17760 UvrA interaction domain BA953_RS10795 PF00005 ABC transporter BA953_RS10800 PF00483 Nucleotidyl transferase BA953_RS10805 PF00196 Bacterial regulatory proteins, luxR family BA953_RS10810 PF00436 Single-strand binding protein family BA953_RS10815 PF17157 Gammaproteobacterial periplasmic sensor domain BA953_RS10815 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS10815 PF00563 EAL domain BA953_RS10835 PF00263 Bacterial type II and III secretion system protein BA953_RS10835 PF03958 Bacterial type II/III secretion system short domain BA953_RS10840 PF01471 Putative peptidoglycan binding domain BA953_RS10840 PF13401 AAA domain BA953_RS10845 PF04575 Protein of unknown function (DUF560) BA953_RS10850 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BA953_RS10850 PF00437 Type II/IV secretion system protein BA953_RS10855 PF00482 Type II secretion system (T2SS), protein F BA953_RS10865 PF07963 Prokaryotic N-terminal methylation motif BA953_RS10870 PF00114 Pilin (bacterial filament) BA953_RS10870 PF07963 Prokaryotic N-terminal methylation motif BA953_RS10905 PF04085 rod shape-determining protein MreC BA953_RS10910 PF04093 rod shape-determining protein MreD BA953_RS10915 PF02545 Maf-like protein BA953_RS10920 PF10150 Ribonuclease E/G family BA953_RS10920 PF00575 S1 RNA binding domain BA953_RS10925 PF13502 AsmA-like C-terminal region BA953_RS10925 PF13116 Protein of unknown function BA953_RS10930 PF00795 Carbon-nitrogen hydrolase BA953_RS10935 PF01523 Putative modulator of DNA gyrase BA953_RS10985 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BA953_RS10985 PF01464 Transglycosylase SLT domain BA953_RS10990 PF04362 Bacterial Fe(2+) trafficking BA953_RS10995 PF14815 NUDIX domain BA953_RS10995 PF00730 HhH-GPD superfamily base excision DNA repair protein BA953_RS10995 PF00633 Helix-hairpin-helix motif BA953_RS11000 PF02390 Putative methyltransferase BA953_RS11005 PF04960 Glutaminase BA953_RS11010 PF04055 Radical SAM superfamily BA953_RS11010 PF06969 HemN C-terminal domain BA953_RS11015 PF01725 Ham1 family BA953_RS11025 PF02594 Uncharacterised ACR, YggU family COG1872 BA953_RS11030 PF02325 YGGT family BA953_RS11035 PF03807 NADP oxidoreductase coenzyme F420-dependent BA953_RS11035 PF14748 Pyrroline-5-carboxylate reductase dimerisation BA953_RS11040 PF01168 Alanine racemase, N-terminal domain BA953_RS11045 PF00437 Type II/IV secretion system protein BA953_RS11050 PF00437 Type II/IV secretion system protein BA953_RS11055 PF03652 Holliday junction resolvase BA953_RS11060 PF02622 Uncharacterized ACR, COG1678 BA953_RS11065 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BA953_RS11065 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BA953_RS11070 PF04452 RNA methyltransferase BA953_RS11075 PF04231 Endonuclease I BA953_RS11080 PF17283 SprT-like zinc ribbon domain BA953_RS11080 PF10263 SprT-like family BA953_RS11090 PF02773 S-adenosylmethionine synthetase, C-terminal domain BA953_RS11090 PF00438 S-adenosylmethionine synthetase, N-terminal domain BA953_RS11090 PF02772 S-adenosylmethionine synthetase, central domain BA953_RS11095 PF02780 Transketolase, C-terminal domain BA953_RS11095 PF02779 Transketolase, pyrimidine binding domain BA953_RS11095 PF00456 Transketolase, thiamine diphosphate binding domain BA953_RS11100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA953_RS11100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA953_RS11105 PF00162 Phosphoglycerate kinase BA953_RS11110 PF01116 Fructose-bisphosphate aldolase class-II BA953_RS11115 PF00924 Mechanosensitive ion channel BA953_RS11115 PF05552 Conserved TM helix BA953_RS11125 PF01810 LysE type translocator BA953_RS11130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS11130 PF03466 LysR substrate binding domain BA953_RS11135 PF04402 Protein of unknown function (DUF541) BA953_RS11140 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS11150 PF00224 Pyruvate kinase, barrel domain BA953_RS11150 PF02887 Pyruvate kinase, alpha/beta domain BA953_RS11155 PF08220 DeoR-like helix-turn-helix domain BA953_RS11155 PF00455 DeoR C terminal sensor domain BA953_RS11160 PF01380 SIS domain BA953_RS11170 PF00486 Transcriptional regulatory protein, C terminal BA953_RS11170 PF00072 Response regulator receiver domain BA953_RS11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS11175 PF00672 HAMP domain BA953_RS11175 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS11180 PF03480 Bacterial extracellular solute-binding protein, family 7 BA953_RS11190 PF00348 Polyprenyl synthetase BA953_RS11195 PF00829 Ribosomal prokaryotic L21 protein BA953_RS11200 PF01016 Ribosomal L27 protein BA953_RS11205 PF01018 GTP1/OBG BA953_RS11205 PF01926 50S ribosome-binding GTPase BA953_RS11210 PF06738 Putative threonine/serine exporter BA953_RS11215 PF12821 Threonine/Serine exporter, ThrE BA953_RS11220 PF00186 Dihydrofolate reductase BA953_RS11225 PF00149 Calcineurin-like phosphoesterase BA953_RS11230 PF04379 ApaG domain BA953_RS11235 PF00398 Ribosomal RNA adenine dimethylase BA953_RS11240 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BA953_RS11245 PF09312 SurA N-terminal domain BA953_RS11250 PF03968 OstA-like protein BA953_RS11250 PF04453 LPS transport system D BA953_RS11255 PF00226 DnaJ domain BA953_RS11255 PF05099 Tellurite resistance protein TerB BA953_RS11265 PF00140 Sigma-70 factor, region 1.2 BA953_RS11265 PF03979 Sigma-70 factor, region 1.1 BA953_RS11265 PF04546 Sigma-70, non-essential region BA953_RS11265 PF04545 Sigma-70, region 4 BA953_RS11265 PF04539 Sigma-70 region 3 BA953_RS11265 PF04542 Sigma-70 region 2 BA953_RS11270 PF08278 DNA primase DnaG DnaB-binding BA953_RS11270 PF10410 DnaB-helicase binding domain of primase BA953_RS11270 PF01807 CHC2 zinc finger BA953_RS11270 PF08275 DNA primase catalytic core, N-terminal domain BA953_RS11275 PF09424 Yqey-like protein BA953_RS11280 PF01165 Ribosomal protein S21 BA953_RS11285 PF00814 Glycoprotease family BA953_RS11290 PF00561 alpha/beta hydrolase fold BA953_RS11295 PF02660 Glycerol-3-phosphate acyltransferase BA953_RS11300 PF02152 Dihydroneopterin aldolase BA953_RS11305 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BA953_RS11310 PF02673 Bacitracin resistance protein BacA BA953_RS11315 PF04977 Septum formation initiator BA953_RS11320 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BA953_RS11325 PF02542 YgbB family BA953_RS11330 PF01142 tRNA pseudouridine synthase D (TruD) BA953_RS11335 PF01975 Survival protein SurE BA953_RS11345 PF01476 LysM domain BA953_RS11345 PF01551 Peptidase family M23 BA953_RS11350 PF04545 Sigma-70, region 4 BA953_RS11350 PF00140 Sigma-70 factor, region 1.2 BA953_RS11350 PF04542 Sigma-70 region 2 BA953_RS11350 PF04539 Sigma-70 region 3 BA953_RS11355 PF01595 Cyclin M transmembrane N-terminal domain BA953_RS11355 PF03471 Transporter associated domain BA953_RS11355 PF00571 CBS domain BA953_RS11360 PF01578 Cytochrome C assembly protein BA953_RS11365 PF00448 SRP54-type protein, GTPase domain BA953_RS11365 PF02881 SRP54-type protein, helical bundle domain BA953_RS11365 PF02978 Signal peptide binding domain BA953_RS11370 PF00886 Ribosomal protein S16 BA953_RS11375 PF05239 PRC-barrel domain BA953_RS11375 PF01782 RimM N-terminal domain BA953_RS11380 PF01746 tRNA (Guanine-1)-methyltransferase BA953_RS11385 PF01245 Ribosomal protein L19 BA953_RS11390 PF03884 DNA gyrase inhibitor YacG BA953_RS11395 PF07072 Cell division protein BA953_RS11400 PF01121 Dephospho-CoA kinase BA953_RS11405 PF06750 Bacterial Peptidase A24 N-terminal domain BA953_RS11405 PF01478 Type IV leader peptidase family BA953_RS11410 PF00482 Type II secretion system (T2SS), protein F BA953_RS11415 PF00437 Type II/IV secretion system protein BA953_RS11415 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BA953_RS11420 PF07963 Prokaryotic N-terminal methylation motif BA953_RS11425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BA953_RS11425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BA953_RS11430 PF01510 N-acetylmuramoyl-L-alanine amidase BA953_RS11435 PF00258 Flavodoxin BA953_RS11440 PF02899 Phage integrase, N-terminal SAM-like domain BA953_RS11440 PF00589 Phage integrase family BA953_RS11445 PF13098 Thioredoxin-like domain BA953_RS11445 PF10411 Disulfide bond isomerase protein N-terminus BA953_RS11450 PF01368 DHH family BA953_RS11450 PF17768 RecJ OB domain BA953_RS11450 PF02272 DHHA1 domain BA953_RS11460 PF00456 Transketolase, thiamine diphosphate binding domain BA953_RS11460 PF17831 Pyruvate dehydrogenase E1 component middle domain BA953_RS11465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BA953_RS11465 PF00364 Biotin-requiring enzyme BA953_RS11465 PF02817 e3 binding domain BA953_RS11470 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS11470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BA953_RS11475 PF00440 Bacterial regulatory proteins, tetR family BA953_RS11480 PF00156 Phosphoribosyl transferase domain BA953_RS11485 PF00484 Carbonic anhydrase BA953_RS11490 PF01740 STAS domain BA953_RS11490 PF00916 Sulfate permease family BA953_RS11495 PF00005 ABC transporter BA953_RS11500 PF01061 ABC-2 type transporter BA953_RS11505 PF02569 Pantoate-beta-alanine ligase BA953_RS11510 PF02548 Ketopantoate hydroxymethyltransferase BA953_RS11515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BA953_RS11520 PF12627 Probable RNA and SrmB- binding site of polymerase A BA953_RS11520 PF01743 Poly A polymerase head domain BA953_RS11520 PF12626 Polymerase A arginine-rich C-terminus BA953_RS11525 PF00749 tRNA synthetases class I (E and Q), catalytic domain BA953_RS11530 PF01258 Prokaryotic dksA/traR C4-type zinc finger BA953_RS11535 PF17746 SfsA N-terminal OB domain BA953_RS11535 PF03749 Sugar fermentation stimulation protein RE domain BA953_RS11540 PF08482 ATP-dependent helicase C-terminal BA953_RS11540 PF00271 Helicase conserved C-terminal domain BA953_RS11540 PF04408 Helicase associated domain (HA2) BA953_RS11540 PF00270 DEAD/DEAH box helicase BA953_RS11555 PF00330 Aconitase family (aconitate hydratase) BA953_RS11555 PF06434 Aconitate hydratase 2 N-terminus BA953_RS11555 PF11791 Aconitate B N-terminal domain BA953_RS11560 PF06062 Uncharacterised protein family (UPF0231) BA953_RS11565 PF00543 Nitrogen regulatory protein P-II BA953_RS11570 PF00909 Ammonium Transporter Family BA953_RS11575 PF13416 Bacterial extracellular solute-binding protein BA953_RS11585 PF00005 ABC transporter BA953_RS11585 PF08402 TOBE domain BA953_RS11590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA953_RS11590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA953_RS11590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA953_RS11590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA953_RS11595 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BA953_RS11595 PF06165 Glycosyltransferase family 36 BA953_RS11600 PF02838 Glycosyl hydrolase family 20, domain 2 BA953_RS11600 PF00728 Glycosyl hydrolase family 20, catalytic domain BA953_RS11605 PF01869 BadF/BadG/BcrA/BcrD ATPase family BA953_RS11615 PF00005 ABC transporter BA953_RS11615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA953_RS11620 PF00005 ABC transporter BA953_RS11620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA953_RS11625 PF12911 N-terminal TM domain of oligopeptide transport permease C BA953_RS11625 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS11630 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS11635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA953_RS11645 PF08468 Methyltransferase small domain N-terminal BA953_RS11645 PF05175 Methyltransferase small domain BA953_RS11650 PF01594 AI-2E family transporter BA953_RS11655 PF00202 Aminotransferase class-III BA953_RS11660 PF01521 Iron-sulphur cluster biosynthesis BA953_RS11665 PF00529 HlyD membrane-fusion protein of T1SS BA953_RS11665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA953_RS11670 PF00873 AcrB/AcrD/AcrF family BA953_RS11675 PF08525 Opacity-associated protein A N-terminal motif BA953_RS11675 PF01476 LysM domain BA953_RS11675 PF01551 Peptidase family M23 BA953_RS11680 PF00579 tRNA synthetases class I (W and Y) BA953_RS11690 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BA953_RS11695 PF13609 Gram-negative porin BA953_RS11700 PF01272 Transcription elongation factor, GreA/GreB, C-term BA953_RS11700 PF03449 Transcription elongation factor, N-terminal BA953_RS11705 PF01985 CRS1 / YhbY (CRM) domain BA953_RS11710 PF01728 FtsJ-like methyltransferase BA953_RS11715 PF17862 AAA+ lid domain BA953_RS11715 PF00004 ATPase family associated with various cellular activities (AAA) BA953_RS11715 PF01434 Peptidase family M41 BA953_RS11715 PF06480 FtsH Extracellular BA953_RS11720 PF00809 Pterin binding enzyme BA953_RS11725 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BA953_RS11725 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BA953_RS11725 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BA953_RS11725 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BA953_RS11735 PF00583 Acetyltransferase (GNAT) family BA953_RS11740 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS11740 PF00563 EAL domain BA953_RS11740 PF03707 Bacterial signalling protein N terminal repeat BA953_RS11745 PF16658 Class II release factor RF3, C-terminal domain BA953_RS11745 PF03144 Elongation factor Tu domain 2 BA953_RS11745 PF00009 Elongation factor Tu GTP binding domain BA953_RS11750 PF00270 DEAD/DEAH box helicase BA953_RS11750 PF00271 Helicase conserved C-terminal domain BA953_RS11755 PF05175 Methyltransferase small domain BA953_RS11760 PF05525 Branched-chain amino acid transport protein BA953_RS11765 PF03462 PCRF domain BA953_RS11765 PF00472 RF-1 domain BA953_RS11770 PF01336 OB-fold nucleic acid binding domain BA953_RS11770 PF00152 tRNA synthetases class II (D, K and N) BA953_RS11775 PF01136 Peptidase family U32 BA953_RS11780 PF01136 Peptidase family U32 BA953_RS11785 PF03707 Bacterial signalling protein N terminal repeat BA953_RS11785 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS11785 PF00563 EAL domain BA953_RS11790 PF02036 SCP-2 sterol transfer family BA953_RS11795 PF13508 Acetyltransferase (GNAT) domain BA953_RS11800 PF03840 Preprotein translocase SecG subunit BA953_RS11815 PF02576 RimP N-terminal domain BA953_RS11815 PF17384 RimP C-terminal SH3 domain BA953_RS11820 PF00575 S1 RNA binding domain BA953_RS11820 PF13184 NusA-like KH domain BA953_RS11820 PF08529 NusA N-terminal domain BA953_RS11825 PF00009 Elongation factor Tu GTP binding domain BA953_RS11825 PF11987 Translation-initiation factor 2 BA953_RS11825 PF08364 Bacterial translation initiation factor IF-2 associated region BA953_RS11825 PF04760 Translation initiation factor IF-2, N-terminal region BA953_RS11830 PF02033 Ribosome-binding factor A BA953_RS11835 PF01509 TruB family pseudouridylate synthase (N terminal domain) BA953_RS11835 PF16198 tRNA pseudouridylate synthase B C-terminal domain BA953_RS11835 PF09157 Pseudouridine synthase II TruB, C-terminal BA953_RS11845 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS11845 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BA953_RS11850 PF01493 GXGXG motif BA953_RS11850 PF04898 Glutamate synthase central domain BA953_RS11850 PF00310 Glutamine amidotransferases class-II BA953_RS11850 PF01645 Conserved region in glutamate synthase BA953_RS11855 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS11855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BA953_RS11860 PF01645 Conserved region in glutamate synthase BA953_RS11860 PF01493 GXGXG motif BA953_RS11860 PF00310 Glutamine amidotransferases class-II BA953_RS11860 PF04898 Glutamate synthase central domain BA953_RS11865 PF16199 Radical_SAM C-terminal domain BA953_RS11865 PF04055 Radical SAM superfamily BA953_RS11870 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS11870 PF01590 GAF domain BA953_RS11870 PF00563 EAL domain BA953_RS11870 PF00360 Phytochrome region BA953_RS11875 PF00072 Response regulator receiver domain BA953_RS11875 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS11875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS11875 PF18415 Histidine kinase receptor ArcB trans-membrane domain BA953_RS11875 PF01627 Hpt domain BA953_RS11875 PF00989 PAS fold BA953_RS11885 PF02321 Outer membrane efflux protein BA953_RS11890 PF00293 NUDIX domain BA953_RS11895 PF06853 Protein of unknown function (DUF1249) BA953_RS11900 PF00149 Calcineurin-like phosphoesterase BA953_RS11905 PF05728 Uncharacterised protein family (UPF0227) BA953_RS11910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS11910 PF00204 DNA gyrase B BA953_RS11910 PF00986 DNA gyrase B subunit, carboxyl terminus BA953_RS11910 PF01751 Toprim domain BA953_RS11915 PF00521 DNA gyrase/topoisomerase IV, subunit A BA953_RS11915 PF03989 DNA gyrase C-terminal domain, beta-propeller BA953_RS11920 PF13180 PDZ domain BA953_RS11925 PF00595 PDZ domain BA953_RS11930 PF06295 Protein of unknown function (DUF1043) BA953_RS11935 PF03969 AFG1-like ATPase BA953_RS11940 PF00572 Ribosomal protein L13 BA953_RS11945 PF00380 Ribosomal protein S9/S16 BA953_RS11950 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BA953_RS11950 PF00355 Rieske [2Fe-2S] domain BA953_RS11955 PF00032 Cytochrome b(C-terminal)/b6/petD BA953_RS11955 PF00033 Cytochrome b/b6/petB BA953_RS11960 PF02167 Cytochrome C1 family BA953_RS11965 PF00043 Glutathione S-transferase, C-terminal domain BA953_RS11965 PF02798 Glutathione S-transferase, N-terminal domain BA953_RS11970 PF04386 Stringent starvation protein B BA953_RS11975 PF04972 BON domain BA953_RS11980 PF13580 SIS domain BA953_RS11985 PF02021 Uncharacterised protein family UPF0102 BA953_RS11990 PF04348 LppC putative lipoprotein BA953_RS11995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BA953_RS12005 PF01795 MraW methylase family BA953_RS12010 PF04999 Cell division protein FtsL BA953_RS12015 PF00905 Penicillin binding protein transpeptidase domain BA953_RS12015 PF03717 Penicillin-binding Protein dimerisation domain BA953_RS12020 PF02875 Mur ligase family, glutamate ligase domain BA953_RS12020 PF01225 Mur ligase family, catalytic domain BA953_RS12020 PF08245 Mur ligase middle domain BA953_RS12025 PF02875 Mur ligase family, glutamate ligase domain BA953_RS12025 PF01225 Mur ligase family, catalytic domain BA953_RS12025 PF08245 Mur ligase middle domain BA953_RS12030 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BA953_RS12030 PF00953 Glycosyl transferase family 4 BA953_RS12035 PF08245 Mur ligase middle domain BA953_RS12035 PF02875 Mur ligase family, glutamate ligase domain BA953_RS12040 PF01098 Cell cycle protein BA953_RS12045 PF03033 Glycosyltransferase family 28 N-terminal domain BA953_RS12045 PF04101 Glycosyltransferase family 28 C-terminal domain BA953_RS12050 PF08245 Mur ligase middle domain BA953_RS12050 PF01225 Mur ligase family, catalytic domain BA953_RS12050 PF02875 Mur ligase family, glutamate ligase domain BA953_RS12055 PF08478 POTRA domain, FtsQ-type BA953_RS12055 PF03799 Cell division protein FtsQ BA953_RS12060 PF02491 SHS2 domain inserted in FTSA BA953_RS12065 PF12327 FtsZ family, C-terminal domain BA953_RS12065 PF00091 Tubulin/FtsZ family, GTPase domain BA953_RS12070 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BA953_RS12075 PF07517 SecA DEAD-like domain BA953_RS12075 PF02810 SEC-C motif BA953_RS12075 PF01043 SecA preprotein cross-linking domain BA953_RS12075 PF07516 SecA Wing and Scaffold domain BA953_RS12080 PF00293 NUDIX domain BA953_RS12085 PF01113 Dihydrodipicolinate reductase, N-terminus BA953_RS12085 PF05173 Dihydrodipicolinate reductase, C-terminus BA953_RS12090 PF00117 Glutamine amidotransferase class-I BA953_RS12090 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BA953_RS12095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BA953_RS12095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BA953_RS12095 PF02142 MGS-like domain BA953_RS12100 PF01925 Sulfite exporter TauE/SafE BA953_RS12105 PF03466 LysR substrate binding domain BA953_RS12105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS12110 PF01228 Glycine radical BA953_RS12115 PF01261 Xylose isomerase-like TIM barrel BA953_RS12120 PF03167 Uracil DNA glycosylase superfamily BA953_RS12135 PF01235 Sodium:alanine symporter family BA953_RS12140 PF03883 Peroxide stress protein YaaA BA953_RS12145 PF01026 TatD related DNase BA953_RS12150 PF07662 Na+ dependent nucleoside transporter C-terminus BA953_RS12150 PF07670 Nucleoside recognition BA953_RS12150 PF01773 Na+ dependent nucleoside transporter N-terminus BA953_RS12160 PF01791 DeoC/LacD family aldolase BA953_RS12165 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BA953_RS12165 PF00591 Glycosyl transferase family, a/b domain BA953_RS12165 PF02885 Glycosyl transferase family, helical bundle domain BA953_RS12170 PF01676 Metalloenzyme superfamily BA953_RS12175 PF01048 Phosphorylase superfamily BA953_RS12185 PF18429 Domain of unknown function (DUF5609) BA953_RS12195 PF18073 Rubredoxin metal binding domain BA953_RS12200 PF00266 Aminotransferase class-V BA953_RS12205 PF01965 DJ-1/PfpI family BA953_RS12210 PF08546 Ketopantoate reductase PanE/ApbA C terminal BA953_RS12210 PF02558 Ketopantoate reductase PanE/ApbA BA953_RS12215 PF03502 Nucleoside-specific channel-forming protein, Tsx BA953_RS12225 PF04545 Sigma-70, region 4 BA953_RS12225 PF04542 Sigma-70 region 2 BA953_RS12235 PF07690 Major Facilitator Superfamily BA953_RS12240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BA953_RS12250 PF05175 Methyltransferase small domain BA953_RS12255 PF01722 BolA-like protein BA953_RS12260 PF11973 NQRA C-terminal domain BA953_RS12260 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BA953_RS12265 PF03116 NQR2, RnfD, RnfE family BA953_RS12270 PF04205 FMN-binding domain BA953_RS12275 PF02508 Rnf-Nqr subunit, membrane protein BA953_RS12280 PF02508 Rnf-Nqr subunit, membrane protein BA953_RS12285 PF00175 Oxidoreductase NAD-binding domain BA953_RS12285 PF00111 2Fe-2S iron-sulfur cluster binding domain BA953_RS12285 PF00970 Oxidoreductase FAD-binding domain BA953_RS12290 PF02424 ApbE family BA953_RS12305 PF00817 impB/mucB/samB family BA953_RS12305 PF11799 impB/mucB/samB family C-terminal domain BA953_RS12305 PF11798 IMS family HHH motif BA953_RS12310 PF00570 HRDC domain BA953_RS12310 PF09382 RQC domain BA953_RS12310 PF16124 RecQ zinc-binding BA953_RS12310 PF00271 Helicase conserved C-terminal domain BA953_RS12310 PF00270 DEAD/DEAH box helicase BA953_RS12315 PF01272 Transcription elongation factor, GreA/GreB, C-term BA953_RS12315 PF03449 Transcription elongation factor, N-terminal BA953_RS12325 PF00704 Glycosyl hydrolases family 18 BA953_RS12325 PF06483 Chitinase C BA953_RS12330 PF00209 Sodium:neurotransmitter symporter family BA953_RS12340 PF08443 RimK-like ATP-grasp domain BA953_RS12340 PF18030 RimK PreATP-grasp domain BA953_RS12345 PF18030 RimK PreATP-grasp domain BA953_RS12345 PF08443 RimK-like ATP-grasp domain BA953_RS12350 PF07687 Peptidase dimerisation domain BA953_RS12350 PF01546 Peptidase family M20/M25/M40 BA953_RS12355 PF00860 Permease family BA953_RS12360 PF00156 Phosphoribosyl transferase domain BA953_RS12365 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) BA953_RS12370 PF07417 Sigma factor-binding transcriptional regulator Crl BA953_RS12375 PF00696 Amino acid kinase family BA953_RS12375 PF01472 PUA domain BA953_RS12380 PF00171 Aldehyde dehydrogenase family BA953_RS12385 PF03477 ATP cone domain BA953_RS12390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BA953_RS12390 PF01872 RibD C-terminal domain BA953_RS12395 PF00677 Lumazine binding domain BA953_RS12400 PF00925 GTP cyclohydrolase II BA953_RS12400 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BA953_RS12405 PF00885 6,7-dimethyl-8-ribityllumazine synthase BA953_RS12410 PF01029 NusB family BA953_RS12415 PF02769 AIR synthase related protein, C-terminal domain BA953_RS12415 PF00586 AIR synthase related protein, N-terminal domain BA953_RS12420 PF04608 Phosphatidylglycerophosphatase A BA953_RS12425 PF11944 Protein of unknown function (DUF3461) BA953_RS12430 PF08335 GlnD PII-uridylyltransferase BA953_RS12430 PF01966 HD domain BA953_RS12430 PF01909 Nucleotidyltransferase domain BA953_RS12430 PF01842 ACT domain BA953_RS12435 PF00557 Metallopeptidase family M24 BA953_RS12440 PF00318 Ribosomal protein S2 BA953_RS12445 PF00889 Elongation factor TS BA953_RS12450 PF00696 Amino acid kinase family BA953_RS12455 PF01765 Ribosome recycling factor BA953_RS12460 PF01255 Putative undecaprenyl diphosphate synthase BA953_RS12470 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BA953_RS12470 PF13288 DXP reductoisomerase C-terminal domain BA953_RS12470 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BA953_RS12475 PF02163 Peptidase family M50 BA953_RS12475 PF17820 PDZ domain BA953_RS12480 PF07244 Surface antigen variable number repeat BA953_RS12480 PF01103 Surface antigen BA953_RS12485 PF03938 Outer membrane protein (OmpH-like) BA953_RS12490 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BA953_RS12490 PF00132 Bacterial transferase hexapeptide (six repeats) BA953_RS12495 PF07977 FabA-like domain BA953_RS12500 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BA953_RS12500 PF00132 Bacterial transferase hexapeptide (six repeats) BA953_RS12505 PF02684 Lipid-A-disaccharide synthetase BA953_RS12510 PF01351 Ribonuclease HII BA953_RS12515 PF01336 OB-fold nucleic acid binding domain BA953_RS12515 PF07733 Bacterial DNA polymerase III alpha NTPase domain BA953_RS12515 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BA953_RS12515 PF14579 Helix-hairpin-helix motif BA953_RS12515 PF02811 PHP domain BA953_RS12520 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BA953_RS12525 PF11734 TilS substrate C-terminal domain BA953_RS12525 PF09179 TilS substrate binding domain BA953_RS12525 PF01171 PP-loop family BA953_RS12530 PF00034 Cytochrome c BA953_RS12535 PF00543 Nitrogen regulatory protein P-II BA953_RS12540 PF03372 Endonuclease/Exonuclease/phosphatase family BA953_RS12550 PF01464 Transglycosylase SLT domain BA953_RS12550 PF01476 LysM domain BA953_RS12555 PF00753 Metallo-beta-lactamase superfamily BA953_RS12555 PF16123 Hydroxyacylglutathione hydrolase C-terminus BA953_RS12560 PF08241 Methyltransferase domain BA953_RS12565 PF00075 RNase H BA953_RS12570 PF00929 Exonuclease BA953_RS12580 PF02770 Acyl-CoA dehydrogenase, middle domain BA953_RS12580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA953_RS12580 PF09317 Domain of unknown function (DUF1974) BA953_RS12580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA953_RS12585 PF13580 SIS domain BA953_RS12590 PF13230 Glutamine amidotransferases class-II BA953_RS12595 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BA953_RS12595 PF03129 Anticodon binding domain BA953_RS12595 PF04073 Aminoacyl-tRNA editing domain BA953_RS12600 PF18389 TrmO C-terminal domain BA953_RS12600 PF01980 tRNA-methyltransferase O BA953_RS12605 PF01197 Ribosomal protein L31 BA953_RS12610 PF00444 Ribosomal protein L36 BA953_RS12615 PF03806 AbgT putative transporter family BA953_RS12625 PF03180 NLPA lipoprotein BA953_RS12630 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS12635 PF00005 ABC transporter BA953_RS12635 PF09383 NIL domain BA953_RS12650 PF00356 Bacterial regulatory proteins, lacI family BA953_RS12655 PF02378 Phosphotransferase system, EIIC BA953_RS12655 PF00367 phosphotransferase system, EIIB BA953_RS12660 PF00128 Alpha amylase, catalytic domain BA953_RS12660 PF16657 Maltogenic Amylase, C-terminal domain BA953_RS12685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA953_RS12690 PF00873 AcrB/AcrD/AcrF family BA953_RS12700 PF00464 Serine hydroxymethyltransferase BA953_RS12715 PF04055 Radical SAM superfamily BA953_RS12715 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BA953_RS12720 PF03099 Biotin/lipoate A/B protein ligase family BA953_RS12725 PF04359 Protein of unknown function (DUF493) BA953_RS12730 PF07943 Penicillin-binding protein 5, C-terminal domain BA953_RS12730 PF00768 D-alanyl-D-alanine carboxypeptidase BA953_RS12735 PF05036 Sporulation related domain BA953_RS12735 PF03330 Lytic transglycolase BA953_RS12740 PF01098 Cell cycle protein BA953_RS12745 PF00905 Penicillin binding protein transpeptidase domain BA953_RS12745 PF03717 Penicillin-binding Protein dimerisation domain BA953_RS12750 PF02590 Predicted SPOUT methyltransferase BA953_RS12760 PF06144 DNA polymerase III, delta subunit BA953_RS12760 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BA953_RS12765 PF04390 Lipopolysaccharide-assembly BA953_RS12770 PF13603 Leucyl-tRNA synthetase, Domain 2 BA953_RS12770 PF00133 tRNA synthetases class I (I, L, M and V) BA953_RS12770 PF08264 Anticodon-binding domain of tRNA BA953_RS12780 PF00795 Carbon-nitrogen hydrolase BA953_RS12785 PF03471 Transporter associated domain BA953_RS12785 PF00571 CBS domain BA953_RS12790 PF02130 Uncharacterized protein family UPF0054 BA953_RS12795 PF02562 PhoH-like protein BA953_RS12800 PF01938 TRAM domain BA953_RS12800 PF04055 Radical SAM superfamily BA953_RS12800 PF00919 Uncharacterized protein family UPF0004 BA953_RS12805 PF01494 FAD binding domain BA953_RS12810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BA953_RS12815 PF02896 PEP-utilising enzyme, TIM barrel domain BA953_RS12815 PF00391 PEP-utilising enzyme, mobile domain BA953_RS12815 PF05524 PEP-utilising enzyme, N-terminal BA953_RS12820 PF00381 PTS HPr component phosphorylation site BA953_RS12825 PF00291 Pyridoxal-phosphate dependent enzyme BA953_RS12835 PF04354 ZipA, C-terminal FtsZ-binding domain BA953_RS12840 PF01653 NAD-dependent DNA ligase adenylation domain BA953_RS12840 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BA953_RS12840 PF03120 NAD-dependent DNA ligase OB-fold domain BA953_RS12840 PF00533 BRCA1 C Terminus (BRCT) domain BA953_RS12840 PF12826 Helix-hairpin-helix motif BA953_RS12845 PF13609 Gram-negative porin BA953_RS12860 PF01145 SPFH domain / Band 7 family BA953_RS12860 PF16200 C-terminal region of band_7 BA953_RS12865 PF00085 Thioredoxin BA953_RS12870 PF00106 short chain dehydrogenase BA953_RS12875 PF08338 Domain of unknown function (DUF1731) BA953_RS12875 PF01370 NAD dependent epimerase/dehydratase family BA953_RS12880 PF07556 Protein of unknown function (DUF1538) BA953_RS12885 PF07556 Protein of unknown function (DUF1538) BA953_RS12900 PF12850 Calcineurin-like phosphoesterase superfamily domain BA953_RS12915 PF17323 Trans-membrane regulatory protein ToxS BA953_RS12920 PF00486 Transcriptional regulatory protein, C terminal BA953_RS12925 PF00183 Hsp90 protein BA953_RS12925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS12930 PF05191 Adenylate kinase, active site lid BA953_RS12935 PF00762 Ferrochelatase BA953_RS12955 PF00403 Heavy-metal-associated domain BA953_RS12960 PF13609 Gram-negative porin BA953_RS12970 PF00749 tRNA synthetases class I (E and Q), catalytic domain BA953_RS12975 PF01389 OmpA-like transmembrane domain BA953_RS12975 PF00691 OmpA family BA953_RS12980 PF00691 OmpA family BA953_RS12980 PF01389 OmpA-like transmembrane domain BA953_RS12995 PF00884 Sulfatase BA953_RS12995 PF08019 Phosphoethanolamine transferase EptA/EptB BA953_RS13005 PF05175 Methyltransferase small domain BA953_RS13045 PF04316 Anti-sigma-28 factor, FlgM BA953_RS13055 PF01584 CheW-like domain BA953_RS13055 PF00072 Response regulator receiver domain BA953_RS13060 PF01739 CheR methyltransferase, SAM binding domain BA953_RS13060 PF03705 CheR methyltransferase, all-alpha domain BA953_RS13065 PF00460 Flagella basal body rod protein BA953_RS13070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA953_RS13070 PF00460 Flagella basal body rod protein BA953_RS13075 PF03963 Flagellar hook capping protein - N-terminal region BA953_RS13075 PF13860 FlgD Ig-like domain BA953_RS13075 PF13861 FlgD Tudor-like domain BA953_RS13080 PF07559 Flagellar basal body protein FlaE BA953_RS13080 PF00460 Flagella basal body rod protein BA953_RS13080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA953_RS13085 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA953_RS13085 PF00460 Flagella basal body rod protein BA953_RS13090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA953_RS13090 PF00460 Flagella basal body rod protein BA953_RS13095 PF02107 Flagellar L-ring protein BA953_RS13100 PF02119 Flagellar P-ring protein BA953_RS13105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BA953_RS13105 PF10135 Rod binding protein BA953_RS13110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA953_RS13110 PF07196 Flagellin hook IN motif BA953_RS13115 PF00669 Bacterial flagellin N-terminal helical region BA953_RS13115 PF00700 Bacterial flagellin C-terminal helical region BA953_RS13120 PF00669 Bacterial flagellin N-terminal helical region BA953_RS13120 PF07196 Flagellin hook IN motif BA953_RS13120 PF00700 Bacterial flagellin C-terminal helical region BA953_RS13125 PF00700 Bacterial flagellin C-terminal helical region BA953_RS13125 PF07196 Flagellin hook IN motif BA953_RS13125 PF00669 Bacterial flagellin N-terminal helical region BA953_RS13235 PF01926 50S ribosome-binding GTPase BA953_RS13235 PF06071 Protein of unknown function (DUF933) BA953_RS13240 PF01195 Peptidyl-tRNA hydrolase BA953_RS13245 PF14572 Phosphoribosyl synthetase-associated domain BA953_RS13245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BA953_RS13250 PF08544 GHMP kinases C terminal BA953_RS13250 PF00288 GHMP kinases N terminal domain BA953_RS13255 PF03550 Outer membrane lipoprotein LolB BA953_RS13260 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BA953_RS13260 PF01488 Shikimate / quinate 5-dehydrogenase BA953_RS13260 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BA953_RS13265 PF00472 RF-1 domain BA953_RS13265 PF03462 PCRF domain BA953_RS13270 PF17827 PrmC N-terminal domain BA953_RS13270 PF13847 Methyltransferase domain BA953_RS13280 PF13369 Transglutaminase-like superfamily BA953_RS13285 PF00793 DAHP synthetase I family BA953_RS13290 PF00149 Calcineurin-like phosphoesterase BA953_RS13290 PF02872 5'-nucleotidase, C-terminal domain BA953_RS13295 PF04073 Aminoacyl-tRNA editing domain BA953_RS13300 PF00860 Permease family BA953_RS13315 PF03358 NADPH-dependent FMN reductase BA953_RS13320 PF03960 ArsC family BA953_RS13325 PF13181 Tetratricopeptide repeat BA953_RS13325 PF01435 Peptidase family M48 BA953_RS13335 PF01594 AI-2E family transporter BA953_RS13340 PF02743 Cache domain BA953_RS13340 PF00672 HAMP domain BA953_RS13340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS13345 PF00578 AhpC/TSA family BA953_RS13350 PF01842 ACT domain BA953_RS13355 PF00701 Dihydrodipicolinate synthetase family BA953_RS13360 PF06804 NlpB/DapX lipoprotein BA953_RS13365 PF13726 Na+-H+ antiporter family BA953_RS13365 PF03553 Na+/H+ antiporter family BA953_RS13370 PF00929 Exonuclease BA953_RS13375 PF18393 MotY N-terminal domain BA953_RS13375 PF00691 OmpA family BA953_RS13380 PF10952 Protein of unknown function (DUF2753) BA953_RS13385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA953_RS13390 PF00730 HhH-GPD superfamily base excision DNA repair protein BA953_RS13390 PF00633 Helix-hairpin-helix motif BA953_RS13390 PF10576 Iron-sulfur binding domain of endonuclease III BA953_RS13395 PF02508 Rnf-Nqr subunit, membrane protein BA953_RS13400 PF04205 FMN-binding domain BA953_RS13405 PF03116 NQR2, RnfD, RnfE family BA953_RS13410 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BA953_RS13410 PF10531 SLBB domain BA953_RS13410 PF12838 4Fe-4S dicluster domain BA953_RS13410 PF13375 RnfC Barrel sandwich hybrid domain BA953_RS13415 PF04060 Putative Fe-S cluster BA953_RS13420 PF02508 Rnf-Nqr subunit, membrane protein BA953_RS13425 PF01464 Transglycosylase SLT domain BA953_RS13445 PF00460 Flagella basal body rod protein BA953_RS13450 PF00460 Flagella basal body rod protein BA953_RS13450 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA953_RS13455 PF03963 Flagellar hook capping protein - N-terminal region BA953_RS13455 PF13860 FlgD Ig-like domain BA953_RS13455 PF13861 FlgD Tudor-like domain BA953_RS13460 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA953_RS13460 PF00460 Flagella basal body rod protein BA953_RS13460 PF07559 Flagellar basal body protein FlaE BA953_RS13465 PF00460 Flagella basal body rod protein BA953_RS13465 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA953_RS13470 PF00460 Flagella basal body rod protein BA953_RS13470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BA953_RS13475 PF02107 Flagellar L-ring protein BA953_RS13480 PF02119 Flagellar P-ring protein BA953_RS13485 PF10135 Rod binding protein BA953_RS13485 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BA953_RS13510 PF00691 OmpA family BA953_RS13510 PF13677 Membrane MotB of proton-channel complex MotA/MotB BA953_RS13515 PF01618 MotA/TolQ/ExbB proton channel family BA953_RS13520 PF04542 Sigma-70 region 2 BA953_RS13520 PF04545 Sigma-70, region 4 BA953_RS13525 PF03748 Flagellar basal body-associated protein FliL BA953_RS13540 PF02561 Flagellar protein FliS BA953_RS13545 PF07196 Flagellin hook IN motif BA953_RS13545 PF07195 Flagellar hook-associated protein 2 C-terminus BA953_RS13545 PF02465 Flagellar hook-associated protein 2 N-terminus BA953_RS13550 PF00700 Bacterial flagellin C-terminal helical region BA953_RS13550 PF00669 Bacterial flagellin N-terminal helical region BA953_RS13560 PF00771 FHIPEP family BA953_RS13565 PF01312 FlhB HrpN YscU SpaS Family BA953_RS13570 PF01311 Bacterial export proteins, family 1 BA953_RS13575 PF01313 Bacterial export proteins, family 3 BA953_RS13580 PF00813 FliP family BA953_RS13585 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BA953_RS13595 PF13488 Glycine zipper BA953_RS13595 PF00691 OmpA family BA953_RS13600 PF00158 Sigma-54 interaction domain BA953_RS13600 PF02954 Bacterial regulatory protein, Fis family BA953_RS13600 PF00072 Response regulator receiver domain BA953_RS13605 PF02049 Flagellar hook-basal body complex protein FliE BA953_RS13610 PF01514 Secretory protein of YscJ/FliF family BA953_RS13610 PF08345 Flagellar M-ring protein C-terminal BA953_RS13615 PF14842 FliG N-terminal domain BA953_RS13615 PF14841 FliG middle domain BA953_RS13615 PF01706 FliG C-terminal domain BA953_RS13625 PF18269 T3SS EscN ATPase C-terminal domain BA953_RS13625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA953_RS13640 PF04225 Opacity-associated protein A LysM-like domain BA953_RS13640 PF01551 Peptidase family M23 BA953_RS13675 PF01648 4'-phosphopantetheinyl transferase superfamily BA953_RS13675 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BA953_RS13680 PF07690 Major Facilitator Superfamily BA953_RS13685 PF00668 Condensation domain BA953_RS13685 PF00550 Phosphopantetheine attachment site BA953_RS13685 PF00501 AMP-binding enzyme BA953_RS13685 PF13193 AMP-binding enzyme C-terminal domain BA953_RS13690 PF00501 AMP-binding enzyme BA953_RS13690 PF00668 Condensation domain BA953_RS13690 PF00550 Phosphopantetheine attachment site BA953_RS13690 PF00975 Thioesterase domain BA953_RS13690 PF13193 AMP-binding enzyme C-terminal domain BA953_RS13705 PF00075 RNase H BA953_RS13755 PF13356 Arm DNA-binding domain BA953_RS13755 PF00589 Phage integrase family BA953_RS13765 PF17757 UvrB interaction domain BA953_RS13765 PF12344 Ultra-violet resistance protein B BA953_RS13765 PF02151 UvrB/uvrC motif BA953_RS13765 PF04851 Type III restriction enzyme, res subunit BA953_RS13765 PF00271 Helicase conserved C-terminal domain BA953_RS13770 PF00072 Response regulator receiver domain BA953_RS13770 PF00158 Sigma-54 interaction domain BA953_RS13770 PF02954 Bacterial regulatory protein, Fis family BA953_RS13775 PF01627 Hpt domain BA953_RS13780 PF01933 Uncharacterised protein family UPF0052 BA953_RS13785 PF06463 Molybdenum Cofactor Synthesis C BA953_RS13785 PF04055 Radical SAM superfamily BA953_RS13790 PF00994 Probable molybdopterin binding domain BA953_RS13795 PF01967 MoaC family BA953_RS13800 PF02597 ThiS family BA953_RS13805 PF02391 MoaE protein BA953_RS13820 PF00571 CBS domain BA953_RS13820 PF01368 DHH family BA953_RS13820 PF02272 DHHA1 domain BA953_RS13820 PF01743 Poly A polymerase head domain BA953_RS13825 PF01554 MatE BA953_RS13830 PF00403 Heavy-metal-associated domain BA953_RS13835 PF01048 Phosphorylase superfamily BA953_RS13870 PF01588 Putative tRNA binding domain BA953_RS13870 PF09334 tRNA synthetases class I (M) BA953_RS13875 PF10609 NUBPL iron-transfer P-loop NTPase BA953_RS13880 PF00485 Phosphoribulokinase / Uridine kinase family BA953_RS13885 PF05170 AsmA family BA953_RS13895 PF12557 Cob(I)alamin adenosyltransferase N terminal BA953_RS13895 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BA953_RS13905 PF01227 GTP cyclohydrolase I BA953_RS13910 PF02152 Dihydroneopterin aldolase BA953_RS13915 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BA953_RS13915 PF01227 GTP cyclohydrolase I BA953_RS13920 PF01451 Low molecular weight phosphotyrosine protein phosphatase BA953_RS13935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BA953_RS13935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BA953_RS13940 PF00462 Glutaredoxin BA953_RS13945 PF01131 DNA topoisomerase BA953_RS13945 PF01751 Toprim domain BA953_RS13955 PF01161 Phosphatidylethanolamine-binding protein BA953_RS13960 PF00106 short chain dehydrogenase BA953_RS13965 PF00850 Histone deacetylase domain BA953_RS13970 PF13344 Haloacid dehalogenase-like hydrolase BA953_RS13970 PF00293 NUDIX domain BA953_RS13990 PF02954 Bacterial regulatory protein, Fis family BA953_RS13990 PF00158 Sigma-54 interaction domain BA953_RS13990 PF00072 Response regulator receiver domain BA953_RS13995 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS13995 PF00989 PAS fold BA953_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS14010 PF02743 Cache domain BA953_RS14010 PF00672 HAMP domain BA953_RS14010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS14020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS14020 PF02743 Cache domain BA953_RS14020 PF00672 HAMP domain BA953_RS14030 PF00884 Sulfatase BA953_RS14030 PF11893 Domain of unknown function (DUF3413) BA953_RS14035 PF07208 Protein of unknown function (DUF1414) BA953_RS14040 PF04245 37-kD nucleoid-associated bacterial protein BA953_RS14060 PF03553 Na+/H+ antiporter family BA953_RS14065 PF02774 Semialdehyde dehydrogenase, dimerisation domain BA953_RS14065 PF01118 Semialdehyde dehydrogenase, NAD binding domain BA953_RS14070 PF00520 Ion transport protein BA953_RS14070 PF00027 Cyclic nucleotide-binding domain BA953_RS14075 PF01914 MarC family integral membrane protein BA953_RS14080 PF00171 Aldehyde dehydrogenase family BA953_RS14080 PF00465 Iron-containing alcohol dehydrogenase BA953_RS14085 PF03776 Septum formation topological specificity factor MinE BA953_RS14090 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BA953_RS14095 PF05209 Septum formation inhibitor MinC, N-terminal domain BA953_RS14095 PF03775 Septum formation inhibitor MinC, C-terminal domain BA953_RS14100 PF05166 YcgL domain BA953_RS14105 PF13406 Transglycosylase SLT domain BA953_RS14110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS14110 PF03466 LysR substrate binding domain BA953_RS14115 PF01773 Na+ dependent nucleoside transporter N-terminus BA953_RS14115 PF07662 Na+ dependent nucleoside transporter C-terminus BA953_RS14115 PF07670 Nucleoside recognition BA953_RS14125 PF03692 Putative zinc- or iron-chelating domain BA953_RS14130 PF05552 Conserved TM helix BA953_RS14130 PF00924 Mechanosensitive ion channel BA953_RS14140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BA953_RS14150 PF00245 Alkaline phosphatase BA953_RS14165 PF13847 Methyltransferase domain BA953_RS14170 PF00672 HAMP domain BA953_RS14170 PF02743 Cache domain BA953_RS14170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS14175 PF01263 Aldose 1-epimerase BA953_RS14180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BA953_RS14180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BA953_RS14185 PF01641 SelR domain BA953_RS14195 PF07023 Protein of unknown function (DUF1315) BA953_RS14200 PF02810 SEC-C motif BA953_RS14205 PF08668 HDOD domain BA953_RS14205 PF00563 EAL domain BA953_RS14210 PF00149 Calcineurin-like phosphoesterase BA953_RS14215 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BA953_RS14220 PF09190 DALR domain BA953_RS14220 PF01406 tRNA synthetases class I (C) catalytic domain BA953_RS14225 PF00265 Thymidine kinase BA953_RS14230 PF01176 Translation initiation factor 1A / IF-1 BA953_RS14235 PF04377 Arginine-tRNA-protein transferase, C terminus BA953_RS14235 PF04376 Arginine-tRNA-protein transferase, N terminus BA953_RS14240 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BA953_RS14250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BA953_RS14255 PF10692 Protein of unknown function (DUF2498) BA953_RS14260 PF08272 Topoisomerase I zinc-ribbon-like BA953_RS14260 PF01751 Toprim domain BA953_RS14260 PF01131 DNA topoisomerase BA953_RS14260 PF01396 Topoisomerase DNA binding C4 zinc finger BA953_RS14265 PF00483 Nucleotidyl transferase BA953_RS14270 PF08323 Starch synthase catalytic domain BA953_RS14270 PF00534 Glycosyl transferases group 1 BA953_RS14290 PF04994 TfoX C-terminal domain BA953_RS14290 PF04993 TfoX N-terminal domain BA953_RS14295 PF00356 Bacterial regulatory proteins, lacI family BA953_RS14300 PF02613 Nitrate reductase delta subunit BA953_RS14305 PF00072 Response regulator receiver domain BA953_RS14305 PF00486 Transcriptional regulatory protein, C terminal BA953_RS14310 PF02698 DUF218 domain BA953_RS14315 PF13847 Methyltransferase domain BA953_RS14320 PF03882 MukF winged-helix domain BA953_RS14320 PF17193 MukF C-terminal domain BA953_RS14320 PF17192 MukF middle domain BA953_RS14325 PF04288 MukE-like family BA953_RS14330 PF04310 MukB N-terminal BA953_RS14330 PF16330 MukB hinge domain BA953_RS14335 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BA953_RS14335 PF12833 Helix-turn-helix domain BA953_RS14340 PF00171 Aldehyde dehydrogenase family BA953_RS14345 PF00732 GMC oxidoreductase BA953_RS14345 PF05199 GMC oxidoreductase BA953_RS14360 PF18030 RimK PreATP-grasp domain BA953_RS14360 PF08443 RimK-like ATP-grasp domain BA953_RS14365 PF08003 Protein of unknown function (DUF1698) BA953_RS14370 PF13649 Methyltransferase domain BA953_RS14375 PF01904 Protein of unknown function DUF72 BA953_RS14380 PF02938 GAD domain BA953_RS14380 PF00152 tRNA synthetases class II (D, K and N) BA953_RS14380 PF01336 OB-fold nucleic acid binding domain BA953_RS14385 PF00849 RNA pseudouridylate synthase BA953_RS14390 PF03971 Monomeric isocitrate dehydrogenase BA953_RS14395 PF00313 'Cold-shock' DNA-binding domain BA953_RS14400 PF02617 ATP-dependent Clp protease adaptor protein ClpS BA953_RS14405 PF00004 ATPase family associated with various cellular activities (AAA) BA953_RS14405 PF17871 AAA lid domain BA953_RS14405 PF02861 Clp amino terminal domain, pathogenicity island component BA953_RS14405 PF10431 C-terminal, D2-small domain, of ClpB protein BA953_RS14405 PF07724 AAA domain (Cdc48 subfamily) BA953_RS14430 PF01226 Formate/nitrite transporter BA953_RS14435 PF03649 Uncharacterised protein family (UPF0014) BA953_RS14440 PF06796 Periplasmic nitrate reductase protein NapE BA953_RS14445 PF03264 NapC/NirT cytochrome c family, N-terminal region BA953_RS14450 PF01568 Molydopterin dinucleotide binding domain BA953_RS14450 PF00384 Molybdopterin oxidoreductase BA953_RS14450 PF18364 Molybdopterin oxidoreductase N-terminal domain BA953_RS14460 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BA953_RS14465 PF00106 short chain dehydrogenase BA953_RS14485 PF02075 Crossover junction endodeoxyribonuclease RuvC BA953_RS14490 PF02203 Tar ligand binding domain homologue BA953_RS14490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS14490 PF00672 HAMP domain BA953_RS14495 PF01330 RuvA N terminal domain BA953_RS14495 PF07499 RuvA, C-terminal domain BA953_RS14500 PF05496 Holliday junction DNA helicase RuvB P-loop domain BA953_RS14500 PF17864 RuvB AAA lid domain BA953_RS14500 PF05491 RuvB C-terminal winged helix domain BA953_RS14505 PF01654 Cytochrome bd terminal oxidase subunit I BA953_RS14510 PF02322 Cytochrome bd terminal oxidase subunit II BA953_RS14515 PF08173 Membrane bound YbgT-like protein BA953_RS14525 PF03061 Thioesterase superfamily BA953_RS14530 PF01618 MotA/TolQ/ExbB proton channel family BA953_RS14535 PF02472 Biopolymer transport protein ExbD/TolR BA953_RS14545 PF04052 TolB amino-terminal domain BA953_RS14545 PF07676 WD40-like Beta Propeller Repeat BA953_RS14550 PF00691 OmpA family BA953_RS14555 PF16331 TolA binding protein trimerisation BA953_RS14555 PF13174 Tetratricopeptide repeat BA953_RS14560 PF02445 Quinolinate synthetase A protein BA953_RS14565 PF02600 Disulfide bond formation protein DsbB BA953_RS14575 PF00089 Trypsin BA953_RS14590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS14590 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS14590 PF00072 Response regulator receiver domain BA953_RS14590 PF09308 LuxQ, periplasmic BA953_RS14595 PF06610 L-alanine exporter BA953_RS14610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA953_RS14615 PF01161 Phosphatidylethanolamine-binding protein BA953_RS14620 PF12804 MobA-like NTP transferase domain BA953_RS14620 PF03479 Plants and Prokaryotes Conserved (PCC) domain BA953_RS14620 PF00132 Bacterial transferase hexapeptide (six repeats) BA953_RS14630 PF01238 Phosphomannose isomerase type I BA953_RS14635 PF00480 ROK family BA953_RS14650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS14650 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS14650 PF00672 HAMP domain BA953_RS14655 PF00072 Response regulator receiver domain BA953_RS14655 PF00486 Transcriptional regulatory protein, C terminal BA953_RS14660 PF00535 Glycosyl transferase family 2 BA953_RS14665 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BA953_RS14675 PF16295 Tetracyclin repressor-like, C-terminal domain BA953_RS14675 PF00440 Bacterial regulatory proteins, tetR family BA953_RS14680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BA953_RS14680 PF09317 Domain of unknown function (DUF1974) BA953_RS14680 PF02770 Acyl-CoA dehydrogenase, middle domain BA953_RS14680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BA953_RS14685 PF12241 Trans-2-enoyl-CoA reductase catalytic region BA953_RS14685 PF07055 Enoyl reductase FAD binding domain BA953_RS14685 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BA953_RS14695 PF03372 Endonuclease/Exonuclease/phosphatase family BA953_RS14700 PF00672 HAMP domain BA953_RS14700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS14705 PF08007 Cupin superfamily protein BA953_RS14710 PF10689 Protein of unknown function (DUF2496) BA953_RS14720 PF01925 Sulfite exporter TauE/SafE BA953_RS14725 PF13307 Helicase C-terminal domain BA953_RS14725 PF06733 DEAD_2 BA953_RS14730 PF13609 Gram-negative porin BA953_RS14735 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BA953_RS14740 PF00202 Aminotransferase class-III BA953_RS14745 PF04055 Radical SAM superfamily BA953_RS14745 PF06968 Biotin and Thiamin Synthesis associated domain BA953_RS14750 PF00155 Aminotransferase class I and II BA953_RS14755 PF08241 Methyltransferase domain BA953_RS14755 PF12697 Alpha/beta hydrolase family BA953_RS14765 PF01435 Peptidase family M48 BA953_RS14775 PF00106 short chain dehydrogenase BA953_RS14775 PF00561 alpha/beta hydrolase fold BA953_RS14800 PF16036 Chalcone isomerase-like BA953_RS14810 PF00206 Lyase BA953_RS14810 PF08328 Adenylosuccinate lyase C-terminal BA953_RS14815 PF04356 Protein of unknown function (DUF489) BA953_RS14830 PF00294 pfkB family carbohydrate kinase BA953_RS14835 PF00816 H-NS histone family BA953_RS14840 PF03553 Na+/H+ antiporter family BA953_RS14845 PF08029 HisG, C-terminal domain BA953_RS14845 PF01634 ATP phosphoribosyltransferase BA953_RS14850 PF00815 Histidinol dehydrogenase BA953_RS14855 PF00155 Aminotransferase class I and II BA953_RS14860 PF08645 Polynucleotide kinase 3 phosphatase BA953_RS14860 PF00475 Imidazoleglycerol-phosphate dehydratase BA953_RS14865 PF00117 Glutamine amidotransferase class-I BA953_RS14870 PF00977 Histidine biosynthesis protein BA953_RS14875 PF00977 Histidine biosynthesis protein BA953_RS14880 PF01502 Phosphoribosyl-AMP cyclohydrolase BA953_RS14880 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BA953_RS14885 PF01709 Transcriptional regulator BA953_RS14895 PF02833 DHHA2 domain BA953_RS14895 PF01368 DHH family BA953_RS14910 PF00005 ABC transporter BA953_RS14915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BA953_RS14915 PF00005 ABC transporter BA953_RS14920 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS14920 PF12911 N-terminal TM domain of oligopeptide transport permease C BA953_RS14925 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS14930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BA953_RS14935 PF02954 Bacterial regulatory protein, Fis family BA953_RS14935 PF00158 Sigma-54 interaction domain BA953_RS14940 PF04012 PspA/IM30 family BA953_RS14945 PF06667 Phage shock protein B BA953_RS14950 PF04024 PspC domain BA953_RS14955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA953_RS14955 PF00529 HlyD membrane-fusion protein of T1SS BA953_RS14960 PF13533 Biotin-lipoyl like BA953_RS14970 PF03352 Methyladenine glycosylase BA953_RS14975 PF03280 Proteobacterial lipase chaperone protein BA953_RS14980 PF00561 alpha/beta hydrolase fold BA953_RS14985 PF01053 Cys/Met metabolism PLP-dependent enzyme BA953_RS14990 PF13091 PLD-like domain BA953_RS14990 PF13396 Phospholipase_D-nuclease N-terminal BA953_RS14995 PF00209 Sodium:neurotransmitter symporter family BA953_RS15000 PF00849 RNA pseudouridylate synthase BA953_RS15005 PF10672 S-adenosylmethionine-dependent methyltransferase BA953_RS15005 PF17785 PUA-like domain BA953_RS15010 PF01066 CDP-alcohol phosphatidyltransferase BA953_RS15015 PF00005 ABC transporter BA953_RS15020 PF00528 Binding-protein-dependent transport system inner membrane component BA953_RS15035 PF06945 Protein of unknown function (DUF1289) BA953_RS15050 PF03795 YCII-related domain BA953_RS15055 PF03061 Thioesterase superfamily BA953_RS15060 PF04279 Intracellular septation protein A BA953_RS15070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS15070 PF00072 Response regulator receiver domain BA953_RS15075 PF00072 Response regulator receiver domain BA953_RS15075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS15080 PF00216 Bacterial DNA-binding protein BA953_RS15085 PF04269 Protein of unknown function, DUF440 BA953_RS15090 PF09285 Elongation factor P, C-terminal BA953_RS15090 PF08207 Elongation factor P (EF-P) KOW-like domain BA953_RS15090 PF01132 Elongation factor P (EF-P) OB domain BA953_RS15100 PF12563 Hemolytic toxin N terminal BA953_RS15100 PF16458 Beta-prism lectin BA953_RS15100 PF07968 Leukocidin/Hemolysin toxin family BA953_RS15120 PF00196 Bacterial regulatory proteins, luxR family BA953_RS15120 PF00072 Response regulator receiver domain BA953_RS15125 PF01541 GIY-YIG catalytic domain BA953_RS15125 PF02151 UvrB/uvrC motif BA953_RS15125 PF08459 UvrC Helix-hairpin-helix N-terminal BA953_RS15130 PF01066 CDP-alcohol phosphatidyltransferase BA953_RS15155 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA953_RS15165 PF07995 Glucose / Sorbosone dehydrogenase BA953_RS15190 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS15190 PF17158 Membrane-associated sensor, integral membrane domain BA953_RS15195 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BA953_RS15195 PF01409 tRNA synthetases class II core domain (F) BA953_RS15200 PF03483 B3/4 domain BA953_RS15200 PF03484 tRNA synthetase B5 domain BA953_RS15200 PF03147 Ferredoxin-fold anticodon binding domain BA953_RS15200 PF01588 Putative tRNA binding domain BA953_RS15200 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BA953_RS15250 PF03466 LysR substrate binding domain BA953_RS15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS15255 PF02678 Pirin BA953_RS15255 PF17954 Quercetinase C-terminal cupin domain BA953_RS15260 PF00857 Isochorismatase family BA953_RS15270 PF00581 Rhodanese-like domain BA953_RS15275 PF00486 Transcriptional regulatory protein, C terminal BA953_RS15295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS15295 PF03466 LysR substrate binding domain BA953_RS15310 PF12729 Four helix bundle sensory module for signal transduction BA953_RS15310 PF00672 HAMP domain BA953_RS15310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS15320 PF00563 EAL domain BA953_RS15320 PF08668 HDOD domain BA953_RS15330 PF01554 MatE BA953_RS15335 PF03466 LysR substrate binding domain BA953_RS15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS15345 PF01565 FAD binding domain BA953_RS15345 PF09330 D-lactate dehydrogenase, membrane binding BA953_RS15355 PF02653 Branched-chain amino acid transport system / permease component BA953_RS15360 PF00005 ABC transporter BA953_RS15365 PF13407 Periplasmic binding protein domain BA953_RS15370 PF00294 pfkB family carbohydrate kinase BA953_RS15375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA953_RS15375 PF00205 Thiamine pyrophosphate enzyme, central domain BA953_RS15375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA953_RS15380 PF01261 Xylose isomerase-like TIM barrel BA953_RS15385 PF00171 Aldehyde dehydrogenase family BA953_RS15410 PF01144 Coenzyme A transferase BA953_RS15415 PF01144 Coenzyme A transferase BA953_RS15420 PF00108 Thiolase, N-terminal domain BA953_RS15420 PF02803 Thiolase, C-terminal domain BA953_RS15435 PF03466 LysR substrate binding domain BA953_RS15435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS15440 PF00083 Sugar (and other) transporter BA953_RS15450 PF01261 Xylose isomerase-like TIM barrel BA953_RS15455 PF00205 Thiamine pyrophosphate enzyme, central domain BA953_RS15455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BA953_RS15455 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BA953_RS15460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA953_RS15460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA953_RS15465 PF00294 pfkB family carbohydrate kinase BA953_RS15475 PF01116 Fructose-bisphosphate aldolase class-II BA953_RS15490 PF04962 KduI/IolB family BA953_RS15495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BA953_RS15495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BA953_RS15500 PF02719 Polysaccharide biosynthesis protein BA953_RS15505 PF00535 Glycosyl transferase family 2 BA953_RS15505 PF02709 N-terminal domain of galactosyltransferase BA953_RS15510 PF07690 Major Facilitator Superfamily BA953_RS15520 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BA953_RS15530 PF00072 Response regulator receiver domain BA953_RS15535 PF12848 ABC transporter BA953_RS15535 PF00005 ABC transporter BA953_RS15535 PF16326 ABC transporter C-terminal domain BA953_RS15545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS15545 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS15545 PF09308 LuxQ, periplasmic BA953_RS15545 PF00072 Response regulator receiver domain BA953_RS15550 PF14376 Haem-binding domain BA953_RS15550 PF03150 Di-haem cytochrome c peroxidase BA953_RS15550 PF00034 Cytochrome c BA953_RS15555 PF00701 Dihydrodipicolinate synthetase family BA953_RS15560 PF01418 Helix-turn-helix domain, rpiR family BA953_RS15560 PF01380 SIS domain BA953_RS15565 PF01979 Amidohydrolase family BA953_RS15570 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BA953_RS15575 PF00480 ROK family BA953_RS15580 PF00474 Sodium:solute symporter family BA953_RS15605 PF02321 Outer membrane efflux protein BA953_RS15615 PF00873 AcrB/AcrD/AcrF family BA953_RS15620 PF00486 Transcriptional regulatory protein, C terminal BA953_RS15620 PF00072 Response regulator receiver domain BA953_RS15625 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS15625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS15625 PF00672 HAMP domain BA953_RS15640 PF00356 Bacterial regulatory proteins, lacI family BA953_RS15645 PF00474 Sodium:solute symporter family BA953_RS15660 PF00356 Bacterial regulatory proteins, lacI family BA953_RS15665 PF03328 HpcH/HpaI aldolase/citrate lyase family BA953_RS15670 PF00815 Histidinol dehydrogenase BA953_RS15685 PF12697 Alpha/beta hydrolase family BA953_RS15690 PF03466 LysR substrate binding domain BA953_RS15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS15700 PF00171 Aldehyde dehydrogenase family BA953_RS15710 PF02028 BCCT, betaine/carnitine/choline family transporter BA953_RS15735 PF03466 LysR substrate binding domain BA953_RS15735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS15740 PF12833 Helix-turn-helix domain BA953_RS15740 PF02311 AraC-like ligand binding domain BA953_RS15750 PF02581 Thiamine monophosphate synthase BA953_RS15755 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BA953_RS15760 PF01810 LysE type translocator BA953_RS15765 PF01235 Sodium:alanine symporter family BA953_RS15790 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS15790 PF00563 EAL domain BA953_RS15790 PF03707 Bacterial signalling protein N terminal repeat BA953_RS15800 PF13495 Phage integrase, N-terminal SAM-like domain BA953_RS15800 PF00589 Phage integrase family BA953_RS15845 PF00881 Nitroreductase family BA953_RS15850 PF02264 LamB porin BA953_RS15865 PF13302 Acetyltransferase (GNAT) domain BA953_RS15865 PF03352 Methyladenine glycosylase BA953_RS15865 PF00117 Glutamine amidotransferase class-I BA953_RS15865 PF00958 GMP synthase C terminal domain BA953_RS15865 PF13673 Acetyltransferase (GNAT) domain BA953_RS15870 PF01327 Polypeptide deformylase BA953_RS15895 PF07690 Major Facilitator Superfamily BA953_RS15900 PF13533 Biotin-lipoyl like BA953_RS15905 PF03466 LysR substrate binding domain BA953_RS15905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS15920 PF00677 Lumazine binding domain BA953_RS15925 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BA953_RS15955 PF00857 Isochorismatase family BA953_RS15965 PF01039 Carboxyl transferase domain BA953_RS15965 PF17848 Acetyl-coA carboxylase zinc finger domain BA953_RS15970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BA953_RS15970 PF03466 LysR substrate binding domain BA953_RS15995 PF01386 Ribosomal L25p family BA953_RS16000 PF00535 Glycosyl transferase family 2 BA953_RS16020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BA953_RS16025 PF00873 AcrB/AcrD/AcrF family BA953_RS16050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS16055 PF00072 Response regulator receiver domain BA953_RS16055 PF00486 Transcriptional regulatory protein, C terminal BA953_RS16065 PF00271 Helicase conserved C-terminal domain BA953_RS16065 PF04851 Type III restriction enzyme, res subunit BA953_RS16070 PF01479 S4 domain BA953_RS16070 PF00849 RNA pseudouridylate synthase BA953_RS16075 PF07690 Major Facilitator Superfamily BA953_RS16085 PF13460 NAD(P)H-binding BA953_RS16085 PF11066 Protein of unknown function (DUF2867) BA953_RS16090 PF01554 MatE BA953_RS16095 PF00005 ABC transporter BA953_RS16100 PF12704 MacB-like periplasmic core domain BA953_RS16100 PF02687 FtsX-like permease family BA953_RS16110 PF06965 Na+/H+ antiporter 1 BA953_RS16130 PF00202 Aminotransferase class-III BA953_RS16135 PF16653 Saccharopine dehydrogenase C-terminal domain BA953_RS16135 PF03435 Saccharopine dehydrogenase NADP binding domain BA953_RS16140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BA953_RS16155 PF00994 Probable molybdopterin binding domain BA953_RS16165 PF00111 2Fe-2S iron-sulfur cluster binding domain BA953_RS16170 PF00268 Ribonucleotide reductase, small chain BA953_RS16175 PF02867 Ribonucleotide reductase, barrel domain BA953_RS16175 PF00317 Ribonucleotide reductase, all-alpha domain BA953_RS16175 PF03477 ATP cone domain BA953_RS16505 PF13193 AMP-binding enzyme C-terminal domain BA953_RS16505 PF00668 Condensation domain BA953_RS16505 PF00501 AMP-binding enzyme BA953_RS16505 PF00550 Phosphopantetheine attachment site BA953_RS16550 PF07715 TonB-dependent Receptor Plug Domain BA953_RS16550 PF00593 TonB dependent receptor BA953_RS16830 PF00005 ABC transporter BA953_RS16830 PF12848 ABC transporter BA953_RS16975 PF18364 Molybdopterin oxidoreductase N-terminal domain BA953_RS16975 PF01568 Molydopterin dinucleotide binding domain BA953_RS16975 PF00384 Molybdopterin oxidoreductase BA953_RS17600 PF01168 Alanine racemase, N-terminal domain BA953_RS17600 PF00842 Alanine racemase, C-terminal domain BA953_RS17820 PF05088 Bacterial NAD-glutamate dehydrogenase BA953_RS17860 PF17516 ProQ C-terminal domain BA953_RS17860 PF04352 ProQ/FINO family BA953_RS18925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BA953_RS18925 PF00672 HAMP domain BA953_RS18925 PF12729 Four helix bundle sensory module for signal transduction BA953_RS19055 PF03222 Tryptophan/tyrosine permease family BA953_RS19120 PF00155 Aminotransferase class I and II BA953_RS19510 PF00563 EAL domain BA953_RS19510 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS19510 PF03707 Bacterial signalling protein N terminal repeat BA953_RS19775 PF00271 Helicase conserved C-terminal domain BA953_RS19775 PF03461 TRCF domain BA953_RS19775 PF00270 DEAD/DEAH box helicase BA953_RS19775 PF17757 UvrB interaction domain BA953_RS19775 PF02559 CarD-like/TRCF domain BA953_RS20100 PF01515 Phosphate acetyl/butaryl transferase BA953_RS20275 PF01343 Peptidase family S49 BA953_RS20275 PF08496 Peptidase family S49 N-terminal BA953_RS20285 PF01343 Peptidase family S49 BA953_RS20285 PF08496 Peptidase family S49 N-terminal BA953_RS20410 PF07992 Pyridine nucleotide-disulphide oxidoreductase BA953_RS20410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BA953_RS20580 PF00004 ATPase family associated with various cellular activities (AAA) BA953_RS20580 PF05362 Lon protease (S16) C-terminal proteolytic domain BA953_RS20580 PF02190 ATP-dependent protease La (LON) substrate-binding domain BA953_RS20615 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS20615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS20615 PF02743 Cache domain BA953_RS20685 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BA953_RS20715 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BA953_RS20715 PF12170 DNA polymerase III tau subunit V interacting with alpha BA953_RS20715 PF12169 DNA polymerase III subunits gamma and tau domain III BA953_RS20745 PF00881 Nitroreductase family BA953_RS20770 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BA953_RS20795 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BA953_RS20795 PF01578 Cytochrome C assembly protein BA953_RS20870 PF00771 FHIPEP family BA953_RS20965 PF08245 Mur ligase middle domain BA953_RS21120 PF18269 T3SS EscN ATPase C-terminal domain BA953_RS21120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BA953_RS21195 PF00669 Bacterial flagellin N-terminal helical region BA953_RS21195 PF07196 Flagellin hook IN motif BA953_RS21195 PF00700 Bacterial flagellin C-terminal helical region BA953_RS21410 PF00676 Dehydrogenase E1 component BA953_RS21410 PF16078 2-oxoglutarate dehydrogenase N-terminus BA953_RS21410 PF16870 2-oxoglutarate dehydrogenase C-terminal BA953_RS21410 PF02779 Transketolase, pyrimidine binding domain BA953_RS21525 PF00728 Glycosyl hydrolase family 20, catalytic domain BA953_RS21525 PF02838 Glycosyl hydrolase family 20, domain 2 BA953_RS21525 PF03173 Putative carbohydrate binding domain BA953_RS21525 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BA953_RS21570 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BA953_RS21570 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BA953_RS21570 PF02769 AIR synthase related protein, C-terminal domain BA953_RS21865 PF05922 Peptidase inhibitor I9 BA953_RS21865 PF00082 Subtilase family BA953_RS22005 PF13538 UvrD-like helicase C-terminal domain BA953_RS22010 PF13361 UvrD-like helicase C-terminal domain BA953_RS22010 PF00580 UvrD/REP helicase N-terminal domain BA953_RS22010 PF12705 PD-(D/E)XK nuclease superfamily BA953_RS22075 PF00873 AcrB/AcrD/AcrF family BA953_RS22090 PF00873 AcrB/AcrD/AcrF family BA953_RS22355 PF01204 Trehalase BA953_RS22605 PF00800 Prephenate dehydratase BA953_RS22605 PF01817 Chorismate mutase type II BA953_RS22620 PF00990 Diguanylate cyclase, GGDEF domain BA953_RS22620 PF00563 EAL domain BA953_RS22740 PF03023 Lipid II flippase MurJ BA953_RS22930 PF03952 Enolase, N-terminal domain BA953_RS22930 PF00113 Enolase, C-terminal TIM barrel domain BA953_RS23000 PF17188 MucB/RseB C-terminal domain BA953_RS23000 PF03888 MucB/RseB N-terminal domain BA953_RS23010 PF00890 FAD binding domain BA953_RS23010 PF02910 Fumarate reductase flavoprotein C-term BA953_RS23120 PF00330 Aconitase family (aconitate hydratase) BA953_RS23315 PF00271 Helicase conserved C-terminal domain BA953_RS23315 PF12137 RNA polymerase recycling family C-terminal BA953_RS23315 PF00176 SNF2 family N-terminal domain BA953_RS23315 PF18339 RapA N-terminal Tudor like domain 1 BA953_RS23315 PF18337 RapA N-terminal Tudor like domain BA953_RS23355 PF00056 lactate/malate dehydrogenase, NAD binding domain BA953_RS23355 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BA953_RS23465 PF02574 Homocysteine S-methyltransferase BA953_RS23465 PF02310 B12 binding domain BA953_RS23465 PF02607 B12 binding domain BA953_RS23465 PF02965 Vitamin B12 dependent methionine synthase, activation domain BA953_RS23465 PF00809 Pterin binding enzyme BA953_RS23470 PF02965 Vitamin B12 dependent methionine synthase, activation domain BA953_RS23470 PF02574 Homocysteine S-methyltransferase BA953_RS23470 PF00809 Pterin binding enzyme BA953_RS23470 PF02607 B12 binding domain BA953_RS23470 PF02310 B12 binding domain BA953_RS23605 PF01627 Hpt domain BA953_RS23605 PF00072 Response regulator receiver domain BA953_RS23605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS23605 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BA953_RS23605 PF00672 HAMP domain BA953_RS23605 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS23660 PF02872 5'-nucleotidase, C-terminal domain BA953_RS23660 PF00149 Calcineurin-like phosphoesterase BA953_RS23875 PF03605 Anaerobic c4-dicarboxylate membrane transporter BA953_RS23945 PF00512 His Kinase A (phospho-acceptor) domain BA953_RS23945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BA953_RS23945 PF00072 Response regulator receiver domain BA953_RS23945 PF01627 Hpt domain BA953_RS23945 PF00672 HAMP domain BA953_RS24105 PF00152 tRNA synthetases class II (D, K and N) BA953_RS24380 PF02441 Flavoprotein BA953_RS24380 PF04127 DNA / pantothenate metabolism flavoprotein BA953_RS24470 PF17191 RecG wedge domain BA953_RS24470 PF00271 Helicase conserved C-terminal domain BA953_RS24470 PF00270 DEAD/DEAH box helicase BA953_RS24700 PF07690 Major Facilitator Superfamily BA953_RS24780 PF01618 MotA/TolQ/ExbB proton channel family