AL537_RS00020	SM00382	ATPases associated with a variety of cellular activities
AL537_RS00020	SM00448	cheY-homologous receiver domain
AL537_RS00025	SM00387	Histidine kinase-like ATPases
AL537_RS00025	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS00030	SM00382	ATPases associated with a variety of cellular activities
AL537_RS00125	SM01130	AL537_RS00125
AL537_RS00150	SM00028	Tetratricopeptide repeats
AL537_RS00235	SM00479	AL537_RS00235
AL537_RS00250	SM00849	Metallo-beta-lactamase superfamily
AL537_RS00255	SM00257	Lysin motif
AL537_RS00270	SM00938	Nitrogen regulatory protein P-II
AL537_RS00280	SM00977	TilS substrate C-terminal domain
AL537_RS00290	SM00481	DNA polymerase alpha chain like domain
AL537_RS00320	SM00935	Outer membrane protein (OmpH-like)
AL537_RS00330	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL537_RS00375	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL537_RS00430	SM00849	Metallo-beta-lactamase superfamily
AL537_RS00495	SM00495	Chitin-binding domain type 3
AL537_RS00495	SM00636	AL537_RS00495
AL537_RS00510	SM00487	DEAD-like helicases superfamily
AL537_RS00510	SM00490	helicase superfamily c-terminal domain
AL537_RS00550	SM00900	AL537_RS00550
AL537_RS00610	SM00464	Found in ATP-dependent protease La (LON)
AL537_RS00640	SM00267	diguanylate cyclase
AL537_RS00655	SM00925	MltA specific insert domain
AL537_RS00750	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL537_RS00750	SM01134	AL537_RS00750
AL537_RS00780	SM00354	helix_turn _helix lactose operon repressor
AL537_RS00795	SM00354	helix_turn _helix lactose operon repressor
AL537_RS00825	SM00354	helix_turn _helix lactose operon repressor
AL537_RS00830	SM01038	Beta galactosidase small chain
AL537_RS00860	SM00028	Tetratricopeptide repeats
AL537_RS00910	SM00858	AL537_RS00910
AL537_RS00915	SM00382	ATPases associated with a variety of cellular activities
AL537_RS00930	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS00950	SM00838	Elongation factor G C-terminus
AL537_RS00950	SM00889	Elongation factor G, domain IV
AL537_RS00955	SM00382	ATPases associated with a variety of cellular activities
AL537_RS00985	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
AL537_RS00990	SM01133	AL537_RS00990
AL537_RS01050	SM00052	Putative diguanylate phosphodiesterase
AL537_RS01050	SM00091	PAS domain
AL537_RS01050	SM00267	diguanylate cyclase
AL537_RS01070	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL537_RS01075	SM00028	Tetratricopeptide repeats
AL537_RS01080	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS01080	SM00322	K homology RNA-binding domain
AL537_RS01085	SM01387	AL537_RS01085
AL537_RS01105	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS01145	SM00382	ATPases associated with a variety of cellular activities
AL537_RS01155	SM01103	AL537_RS01155
AL537_RS01180	SM00363	S4 RNA-binding domain
AL537_RS01220	SM00091	PAS domain
AL537_RS01220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS01220	SM00387	Histidine kinase-like ATPases
AL537_RS01220	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS01220	SM00448	cheY-homologous receiver domain
AL537_RS01240	SM00382	ATPases associated with a variety of cellular activities
AL537_RS01245	SM00382	ATPases associated with a variety of cellular activities
AL537_RS01265	SM01068	Putative carbohydrate binding domain
AL537_RS01275	SM00382	ATPases associated with a variety of cellular activities
AL537_RS01295	SM00938	Nitrogen regulatory protein P-II
AL537_RS01320	SM00487	DEAD-like helicases superfamily
AL537_RS01320	SM00490	helicase superfamily c-terminal domain
AL537_RS01320	SM00847	Helicase associated domain (HA2)  Add an annotation
AL537_RS01375	SM00382	ATPases associated with a variety of cellular activities
AL537_RS01385	SM00947	Carbonic anhydrase
AL537_RS01415	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS01415	SM00895	AL537_RS01415
AL537_RS01420	SM00644	AL537_RS01420
AL537_RS01485	SM00382	ATPases associated with a variety of cellular activities
AL537_RS01485	SM00962	SRP54-type protein, GTPase domain
AL537_RS01485	SM00963	SRP54-type protein, helical bundle domain
AL537_RS01495	SM01091	Transporter associated domain
AL537_RS01525	SM00829	Enoylreductase
AL537_RS01610	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL537_RS01620	SM00382	ATPases associated with a variety of cellular activities
AL537_RS01630	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
AL537_RS01630	SM00534	ATPase domain of DNA mismatch repair MUTS family
AL537_RS01640	SM00257	Lysin motif
AL537_RS01675	SM01192	AL537_RS01675
AL537_RS01675	SM01193	AL537_RS01675
AL537_RS01690	SM00954	Region found in RelA / SpoT proteins
AL537_RS01710	SM00073	Histidine Phosphotransfer domain
AL537_RS01710	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS01710	SM00387	Histidine kinase-like ATPases
AL537_RS01710	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS01710	SM00448	cheY-homologous receiver domain
AL537_RS01735	SM00358	Double-stranded RNA binding motif
AL537_RS01735	SM00535	Ribonuclease III family
AL537_RS01745	SM00838	Elongation factor G C-terminus
AL537_RS01885	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL537_RS01900	SM00861	Transketolase, pyrimidine binding domain
AL537_RS01920	SM00731	SprT homologues.
AL537_RS01945	SM00732	Likely ribonuclease with RNase H fold.
AL537_RS01955	SM00382	ATPases associated with a variety of cellular activities
AL537_RS01975	SM01152	AL537_RS01975
AL537_RS01990	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL537_RS02010	SM00478	endonuclease III
AL537_RS02010	SM00525	AL537_RS02010
AL537_RS02060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS02060	SM01049	AL537_RS02060
AL537_RS02140	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL537_RS02145	SM00354	helix_turn _helix lactose operon repressor
AL537_RS02175	SM00495	Chitin-binding domain type 3
AL537_RS02230	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL537_RS02275	SM00563	Phosphate acyltransferases
AL537_RS02310	SM00382	ATPases associated with a variety of cellular activities
AL537_RS02320	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS02335	SM00382	ATPases associated with a variety of cellular activities
AL537_RS02365	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS02365	SM00924	MgtE intracellular N domain
AL537_RS02395	SM00487	DEAD-like helicases superfamily
AL537_RS02395	SM00490	helicase superfamily c-terminal domain
AL537_RS02400	SM00670	Large family of predicted nucleotide-binding domains
AL537_RS02420	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS02490	SM00382	ATPases associated with a variety of cellular activities
AL537_RS02495	SM00028	Tetratricopeptide repeats
AL537_RS02505	SM00965	Secretin and TonB N terminus short domain
AL537_RS02525	SM00052	Putative diguanylate phosphodiesterase
AL537_RS02525	SM00267	diguanylate cyclase
AL537_RS02535	SM00421	helix_turn_helix, Lux Regulon
AL537_RS02570	SM01018	B12 binding domain
AL537_RS02690	SM01005	Alanine racemase, C-terminal domain
AL537_RS02750	SM00965	Secretin and TonB N terminus short domain
AL537_RS02825	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL537_RS02865	SM00919	Malic enzyme, NAD binding domain
AL537_RS02865	SM01274	AL537_RS02865
AL537_RS02885	SM00838	Elongation factor G C-terminus
AL537_RS02885	SM00889	Elongation factor G, domain IV
AL537_RS02925	SM00320	WD40 repeats
AL537_RS02960	SM00382	ATPases associated with a variety of cellular activities
AL537_RS02985	SM00100	Cyclic nucleotide-monophosphate binding domain
AL537_RS02985	SM00419	helix_turn_helix, cAMP Regulatory protein
AL537_RS02990	SM01150	AL537_RS02990
AL537_RS03035	SM00967	RNA 2'-O ribose methyltransferase substrate binding
AL537_RS03040	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS03040	SM00357	Cold shock protein domain
AL537_RS03040	SM00955	AL537_RS03040
AL537_RS03055	SM00671	Sel1-like repeats.
AL537_RS03065	SM00788	Adenylosuccinate synthetase
AL537_RS03075	SM00244	prohibitin homologues
AL537_RS03080	SM00244	prohibitin homologues
AL537_RS03100	SM00853	MutL C terminal dimerisation domain
AL537_RS03100	SM01340	AL537_RS03100
AL537_RS03105	SM00257	Lysin motif
AL537_RS03105	SM00646	AL537_RS03105
AL537_RS03185	SM00479	AL537_RS03185
AL537_RS03215	SM00450	Rhodanese Homology Domain
AL537_RS03230	SM00971	Serine acetyltransferase, N-terminal
AL537_RS03285	SM00841	Elongation factor P, C-terminal
AL537_RS03285	SM01185	AL537_RS03285
AL537_RS03310	SM00883	Chaperonin 10 Kd subunit
AL537_RS03335	SM00448	cheY-homologous receiver domain
AL537_RS03335	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS03340	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS03340	SM00387	Histidine kinase-like ATPases
AL537_RS03340	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS03375	SM00421	helix_turn_helix, Lux Regulon
AL537_RS03375	SM00448	cheY-homologous receiver domain
AL537_RS03380	SM01091	Transporter associated domain
AL537_RS03420	SM00100	Cyclic nucleotide-monophosphate binding domain
AL537_RS03425	SM00479	AL537_RS03425
AL537_RS03445	SM00878	Biotin carboxylase C-terminal domain
AL537_RS03475	SM00382	ATPases associated with a variety of cellular activities
AL537_RS03545	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS03550	SM00422	helix_turn_helix, mercury resistance
AL537_RS03560	SM00798	AICARFT/IMPCHase bienzyme
AL537_RS03560	SM00851	MGS-like domain
AL537_RS03570	SM01209	AL537_RS03570
AL537_RS03570	SM01210	AL537_RS03570
AL537_RS03580	SM00411	bacterial (prokaryotic) histone like domain
AL537_RS03585	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS03600	SM00986	Uracil DNA glycosylase superfamily
AL537_RS03600	SM00987	UreE urease accessory protein, C-terminal domain 
AL537_RS03620	SM00663	RNA polymerase I subunit A N-terminus
AL537_RS03645	SM00649	Ribosomal protein L11/L12
AL537_RS03650	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AL537_RS03650	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL537_RS03715	SM00155	Phospholipase D. Active site motifs.
AL537_RS03780	SM00360	RNA recognition motif
AL537_RS03845	SM00563	Phosphate acyltransferases
AL537_RS03870	SM00450	Rhodanese Homology Domain
AL537_RS03890	SM00382	ATPases associated with a variety of cellular activities
AL537_RS03895	SM00382	ATPases associated with a variety of cellular activities
AL537_RS03895	SM00962	SRP54-type protein, GTPase domain
AL537_RS03895	SM00963	SRP54-type protein, helical bundle domain
AL537_RS03960	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL537_RS03965	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL537_RS03970	SM00052	Putative diguanylate phosphodiesterase
AL537_RS04000	SM01144	AL537_RS04000
AL537_RS04005	SM00052	Putative diguanylate phosphodiesterase
AL537_RS04005	SM00267	diguanylate cyclase
AL537_RS04005	SM00897	FIST N domain
AL537_RS04005	SM01204	AL537_RS04005
AL537_RS04040	SM01219	AL537_RS04040
AL537_RS04065	SM00028	Tetratricopeptide repeats
AL537_RS04130	SM00357	Cold shock protein domain
AL537_RS04130	SM00382	ATPases associated with a variety of cellular activities
AL537_RS04130	SM00959	Rho termination factor, N-terminal domain
AL537_RS04140	SM00487	DEAD-like helicases superfamily
AL537_RS04140	SM00490	helicase superfamily c-terminal domain
AL537_RS04160	SM00341	Helicase and RNase D C-terminal
AL537_RS04160	SM00487	DEAD-like helicases superfamily
AL537_RS04160	SM00490	helicase superfamily c-terminal domain
AL537_RS04160	SM00956	AL537_RS04160
AL537_RS04170	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS04230	SM00876	Biotin and Thiamin Synthesis associated domain
AL537_RS04345	SM01001	AIR carboxylase
AL537_RS04370	SM00257	Lysin motif
AL537_RS04440	SM00563	Phosphate acyltransferases
AL537_RS04450	SM00382	ATPases associated with a variety of cellular activities
AL537_RS04490	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS04510	SM00382	ATPases associated with a variety of cellular activities
AL537_RS04550	SM00470	ParB-like nuclease domain
AL537_RS04565	SM01228	AL537_RS04565
AL537_RS04585	SM01234	AL537_RS04585
AL537_RS04600	SM00382	ATPases associated with a variety of cellular activities
AL537_RS04610	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS04610	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL537_RS04620	SM00382	ATPases associated with a variety of cellular activities
AL537_RS04620	SM00760	Bacterial dnaA protein helix-turn-helix domain
AL537_RS04625	SM00480	DNA polymerase III beta subunit
AL537_RS04635	SM00387	Histidine kinase-like ATPases
AL537_RS04635	SM00433	TopoisomeraseII
AL537_RS04660	SM00642	Alpha-amylase domain
AL537_RS04665	SM00836	DALR anticodon binding domain
AL537_RS04700	SM00829	Enoylreductase
AL537_RS04840	SM00382	ATPases associated with a variety of cellular activities
AL537_RS04890	SM00220	Serine/Threonine protein kinases, catalytic domain
AL537_RS04895	SM00354	helix_turn _helix lactose operon repressor
AL537_RS04960	SM00344	helix_turn_helix ASNC type
AL537_RS04965	SM00052	Putative diguanylate phosphodiesterase
AL537_RS04965	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL537_RS04965	SM00091	PAS domain
AL537_RS04965	SM00267	diguanylate cyclase
AL537_RS05005	SM00382	ATPases associated with a variety of cellular activities
AL537_RS05010	SM00749	bacterial OsmY and nodulation domain
AL537_RS05030	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AL537_RS05030	SM00195	Dual specificity phosphatase, catalytic domain
AL537_RS05030	SM00404	Protein tyrosine phosphatase, catalytic domain motif
AL537_RS05065	SM00052	Putative diguanylate phosphodiesterase
AL537_RS05065	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL537_RS05065	SM00091	PAS domain
AL537_RS05065	SM00267	diguanylate cyclase
AL537_RS05125	SM01004	Delta-aminolevulinic acid dehydratase
AL537_RS05140	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AL537_RS05140	SM00474	3'-5' exonuclease
AL537_RS05140	SM00475	5'-3' exonuclease
AL537_RS05140	SM00482	DNA polymerase A domain
AL537_RS05175	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL537_RS05185	SM00052	Putative diguanylate phosphodiesterase
AL537_RS05185	SM00267	diguanylate cyclase
AL537_RS05185	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS05190	SM00382	ATPases associated with a variety of cellular activities
AL537_RS05190	SM00448	cheY-homologous receiver domain
AL537_RS05195	SM00091	PAS domain
AL537_RS05195	SM00387	Histidine kinase-like ATPases
AL537_RS05195	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS05205	SM01230	AL537_RS05205
AL537_RS05260	SM00363	S4 RNA-binding domain
AL537_RS05275	SM00382	ATPases associated with a variety of cellular activities
AL537_RS05355	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS05355	SM00732	Likely ribonuclease with RNase H fold.
AL537_RS05375	SM00448	cheY-homologous receiver domain
AL537_RS05375	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS05380	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS05380	SM00387	Histidine kinase-like ATPases
AL537_RS05380	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS05390	SM00487	DEAD-like helicases superfamily
AL537_RS05390	SM00490	helicase superfamily c-terminal domain
AL537_RS05400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL537_RS05400	SM00954	Region found in RelA / SpoT proteins
AL537_RS05405	SM01409	AL537_RS05405
AL537_RS05410	SM00072	Guanylate kinase homologues.
AL537_RS05415	SM00028	Tetratricopeptide repeats
AL537_RS05470	SM00382	ATPases associated with a variety of cellular activities
AL537_RS05475	SM00382	ATPases associated with a variety of cellular activities
AL537_RS05520	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS05520	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS05520	SM01049	AL537_RS05520
AL537_RS05550	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
AL537_RS05550	SM01232	AL537_RS05550
AL537_RS05560	SM00672	Putative lipopolysaccharide-modifying enzyme.
AL537_RS05615	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS05695	SM00984	UDP binding domain
AL537_RS05765	SM00849	Metallo-beta-lactamase superfamily
AL537_RS05765	SM01027	Beta-Casp domain
AL537_RS05775	SM00984	UDP binding domain
AL537_RS05830	SM00984	UDP binding domain
AL537_RS05890	SM00382	ATPases associated with a variety of cellular activities
AL537_RS05890	SM01086	C-terminal, D2-small domain, of ClpB protein
AL537_RS05905	SM00354	helix_turn _helix lactose operon repressor
AL537_RS05910	SM00487	DEAD-like helicases superfamily
AL537_RS05910	SM00490	helicase superfamily c-terminal domain
AL537_RS05925	SM01403	AL537_RS05925
AL537_RS05945	SM01382	AL537_RS05945
AL537_RS05945	SM01383	AL537_RS05945
AL537_RS05960	SM00322	K homology RNA-binding domain
AL537_RS05980	SM01374	AL537_RS05980
AL537_RS05985	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
AL537_RS06050	SM00363	S4 RNA-binding domain
AL537_RS06050	SM01390	AL537_RS06050
AL537_RS06055	SM00662	RNA polymerases D
AL537_RS06085	SM00487	DEAD-like helicases superfamily
AL537_RS06085	SM00490	helicase superfamily c-terminal domain
AL537_RS06140	SM00382	ATPases associated with a variety of cellular activities
AL537_RS06225	SM00382	ATPases associated with a variety of cellular activities
AL537_RS06325	SM00650	Ribosomal RNA adenine dimethylases
AL537_RS06345	SM00271	DnaJ molecular chaperone homology domain
AL537_RS06365	SM01329	AL537_RS06365
AL537_RS06370	SM00917	LeuA allosteric (dimerisation) domain
AL537_RS06385	SM00014	Acid phosphatase homologues
AL537_RS06415	SM00267	diguanylate cyclase
AL537_RS06420	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS06435	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL537_RS06435	SM01134	AL537_RS06435
AL537_RS06450	SM00448	cheY-homologous receiver domain
AL537_RS06450	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS06455	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS06455	SM00387	Histidine kinase-like ATPases
AL537_RS06455	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS06470	SM01120	AL537_RS06470
AL537_RS06505	SM00563	Phosphate acyltransferases
AL537_RS06545	SM00400	zinc finger
AL537_RS06545	SM00493	AL537_RS06545
AL537_RS06545	SM00766	DNA primase DnaG DnaB-binding
AL537_RS06570	SM01207	AL537_RS06570
AL537_RS06575	SM00905	Dihydroneopterin aldolase
AL537_RS06595	SM00382	ATPases associated with a variety of cellular activities
AL537_RS06610	SM00287	Bacterial SH3 domain homologues
AL537_RS06625	SM00880	AL537_RS06625
AL537_RS06625	SM01118	AL537_RS06625
AL537_RS06635	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS06675	SM00387	Histidine kinase-like ATPases
AL537_RS06675	SM00433	TopoisomeraseII
AL537_RS06680	SM00434	DNA Topoisomerase IV
AL537_RS06685	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL537_RS06690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL537_RS06750	SM00749	bacterial OsmY and nodulation domain
AL537_RS06835	SM00842	Cell division protein FtsA
AL537_RS06840	SM00864	Tubulin/FtsZ family, GTPase domain
AL537_RS06840	SM00865	Tubulin/FtsZ family, C-terminal domain
AL537_RS06855	SM00957	SecA DEAD-like domain
AL537_RS06855	SM00958	SecA preprotein cross-linking domain
AL537_RS06870	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
AL537_RS06875	SM00851	MGS-like domain
AL537_RS06875	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
AL537_RS06955	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL537_RS06960	SM00091	PAS domain
AL537_RS06960	SM00267	diguanylate cyclase
AL537_RS06965	SM00073	Histidine Phosphotransfer domain
AL537_RS06965	SM00091	PAS domain
AL537_RS06965	SM00387	Histidine kinase-like ATPases
AL537_RS06965	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS06965	SM00448	cheY-homologous receiver domain
AL537_RS06975	SM00448	cheY-homologous receiver domain
AL537_RS06975	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS07030	SM00518	AP endonuclease family 2
AL537_RS07040	SM00986	Uracil DNA glycosylase superfamily
AL537_RS07040	SM00987	UreE urease accessory protein, C-terminal domain 
AL537_RS07065	SM00487	DEAD-like helicases superfamily
AL537_RS07065	SM00490	helicase superfamily c-terminal domain
AL537_RS07110	SM00382	ATPases associated with a variety of cellular activities
AL537_RS07130	SM00927	DNA mismatch repair enzyme MutH
AL537_RS07140	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL537_RS07160	SM01154	AL537_RS07160
AL537_RS07175	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL537_RS07190	SM00904	Riboflavin kinase
AL537_RS07215	SM00226	Low molecular weight phosphatase family
AL537_RS07220	SM00448	cheY-homologous receiver domain
AL537_RS07220	SM00850	LytTr DNA-binding domain
AL537_RS07265	SM00830	Chorismate mutase type II
AL537_RS07280	SM00382	ATPases associated with a variety of cellular activities
AL537_RS07300	SM00830	Chorismate mutase type II
AL537_RS07310	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS07320	SM00363	S4 RNA-binding domain
AL537_RS07330	SM00382	ATPases associated with a variety of cellular activities
AL537_RS07330	SM01086	C-terminal, D2-small domain, of ClpB protein
AL537_RS07410	SM00448	cheY-homologous receiver domain
AL537_RS07410	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS07415	SM00091	PAS domain
AL537_RS07415	SM00387	Histidine kinase-like ATPases
AL537_RS07415	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS07445	SM00382	ATPases associated with a variety of cellular activities
AL537_RS07485	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS07495	SM00020	Trypsin-like serine protease
AL537_RS07510	SM01323	AL537_RS07510
AL537_RS07555	SM00271	DnaJ molecular chaperone homology domain
AL537_RS07580	SM00562	AL537_RS07580
AL537_RS07595	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS07615	SM00564	beta-propeller repeat
AL537_RS07620	SM00382	ATPases associated with a variety of cellular activities
AL537_RS07640	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS07640	SM01240	AL537_RS07640
AL537_RS07655	SM00495	Chitin-binding domain type 3
AL537_RS07760	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS07800	SM00857	Resolvase, N terminal domain
AL537_RS07810	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS07820	SM00487	DEAD-like helicases superfamily
AL537_RS07905	SM00271	DnaJ molecular chaperone homology domain
AL537_RS07955	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS07960	SM01211	AL537_RS07960
AL537_RS08015	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AL537_RS08065	SM00861	Transketolase, pyrimidine binding domain
AL537_RS08090	SM00981	AL537_RS08090
AL537_RS08115	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
AL537_RS08115	SM00475	5'-3' exonuclease
AL537_RS08125	SM00267	diguanylate cyclase
AL537_RS08130	SM00028	Tetratricopeptide repeats
AL537_RS08160	SM00382	ATPases associated with a variety of cellular activities
AL537_RS08160	SM00930	AL537_RS08160
AL537_RS08170	SM00354	helix_turn _helix lactose operon repressor
AL537_RS08180	SM00642	Alpha-amylase domain
AL537_RS08190	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS08205	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL537_RS08220	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL537_RS08275	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS08275	SM01091	Transporter associated domain
AL537_RS08290	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL537_RS08420	SM01400	AL537_RS08420
AL537_RS08440	SM00937	AL537_RS08440
AL537_RS08475	SM00363	S4 RNA-binding domain
AL537_RS08480	SM00463	Small MutS-related domain
AL537_RS08505	SM01081	Putative carbohydrate binding domain
AL537_RS08590	SM00858	AL537_RS08590
AL537_RS08595	SM00260	Two component signalling adaptor domain
AL537_RS08595	SM00448	cheY-homologous receiver domain
AL537_RS08600	SM00138	Methyltransferase, chemotaxis proteins 
AL537_RS08645	SM00047	Lysozyme subfamily 2
AL537_RS08715	SM00771	ZipA, C-terminal domain (FtsZ-binding)
AL537_RS08720	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL537_RS08720	SM00292	breast cancer carboxy-terminal domain
AL537_RS08720	SM00532	Ligase N family
AL537_RS08745	SM00244	prohibitin homologues
AL537_RS08780	SM00938	Nitrogen regulatory protein P-II
AL537_RS08785	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS08815	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS08820	SM00387	Histidine kinase-like ATPases
AL537_RS08840	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
AL537_RS08950	SM00861	Transketolase, pyrimidine binding domain
AL537_RS08965	SM00881	CoA binding domain
AL537_RS08975	SM00382	ATPases associated with a variety of cellular activities
AL537_RS08985	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS08990	SM00899	AL537_RS08990
AL537_RS09010	SM00836	DALR anticodon binding domain
AL537_RS09010	SM01016	Arginyl tRNA synthetase N terminal dom
AL537_RS09040	SM00487	DEAD-like helicases superfamily
AL537_RS09040	SM00491	AL537_RS09040
AL537_RS09070	SM00474	3'-5' exonuclease
AL537_RS09125	SM00825	Beta-ketoacyl synthase
AL537_RS09130	SM00822	AL537_RS09130
AL537_RS09140	SM00825	Beta-ketoacyl synthase
AL537_RS09200	SM00563	Phosphate acyltransferases
AL537_RS09230	SM01091	Transporter associated domain
AL537_RS09235	SM00487	DEAD-like helicases superfamily
AL537_RS09235	SM00490	helicase superfamily c-terminal domain
AL537_RS09250	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AL537_RS09285	SM00382	ATPases associated with a variety of cellular activities
AL537_RS09285	SM00448	cheY-homologous receiver domain
AL537_RS09290	SM00387	Histidine kinase-like ATPases
AL537_RS09290	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS09310	SM00382	ATPases associated with a variety of cellular activities
AL537_RS09310	SM00994	ClpX C4-type zinc finger
AL537_RS09310	SM01086	C-terminal, D2-small domain, of ClpB protein
AL537_RS09315	SM00382	ATPases associated with a variety of cellular activities
AL537_RS09315	SM00464	Found in ATP-dependent protease La (LON)
AL537_RS09320	SM00411	bacterial (prokaryotic) histone like domain
AL537_RS09330	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL537_RS09340	SM01144	AL537_RS09340
AL537_RS09345	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL537_RS09350	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL537_RS09380	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL537_RS09400	SM00563	Phosphate acyltransferases
AL537_RS09410	SM00978	AL537_RS09410
AL537_RS09475	SM00344	helix_turn_helix ASNC type
AL537_RS09505	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS09505	SM00267	diguanylate cyclase
AL537_RS09520	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS09540	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS09540	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS09590	SM00487	DEAD-like helicases superfamily
AL537_RS09590	SM00490	helicase superfamily c-terminal domain
AL537_RS09590	SM00982	AL537_RS09590
AL537_RS09590	SM01058	CarD-like/TRCF domain
AL537_RS09605	SM00382	ATPases associated with a variety of cellular activities
AL537_RS09620	SM00849	Metallo-beta-lactamase superfamily
AL537_RS09625	SM00382	ATPases associated with a variety of cellular activities
AL537_RS09655	SM00763	PrkA AAA domain
AL537_RS09705	SM00382	ATPases associated with a variety of cellular activities
AL537_RS09710	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS09710	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL537_RS09725	SM01276	AL537_RS09725
AL537_RS09750	SM00491	AL537_RS09750
AL537_RS09775	SM00357	Cold shock protein domain
AL537_RS09785	SM00382	ATPases associated with a variety of cellular activities
AL537_RS09785	SM01086	C-terminal, D2-small domain, of ClpB protein
AL537_RS09790	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS09820	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL537_RS09820	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL537_RS09820	SM00493	AL537_RS09820
AL537_RS09855	SM00354	helix_turn _helix lactose operon repressor
AL537_RS09865	SM00448	cheY-homologous receiver domain
AL537_RS09865	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS09950	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL537_RS09955	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10010	SM00028	Tetratricopeptide repeats
AL537_RS10045	SM00387	Histidine kinase-like ATPases
AL537_RS10045	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS10045	SM00448	cheY-homologous receiver domain
AL537_RS10060	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS10060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS10075	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL537_RS10105	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS10130	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AL537_RS10130	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AL537_RS10135	SM00344	helix_turn_helix ASNC type
AL537_RS10140	SM00843	AL537_RS10140
AL537_RS10150	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10180	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL537_RS10180	SM00876	Biotin and Thiamin Synthesis associated domain
AL537_RS10275	SM00528	Domain in histone-like proteins of HNS family
AL537_RS10285	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10335	SM00052	Putative diguanylate phosphodiesterase
AL537_RS10350	SM00840	AL537_RS10350
AL537_RS10425	SM01131	AL537_RS10425
AL537_RS10435	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10440	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10460	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10515	SM00155	Phospholipase D. Active site motifs.
AL537_RS10545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL537_RS10545	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10565	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10610	SM00387	Histidine kinase-like ATPases
AL537_RS10615	SM00448	cheY-homologous receiver domain
AL537_RS10615	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS10625	SM00487	DEAD-like helicases superfamily
AL537_RS10625	SM00490	helicase superfamily c-terminal domain
AL537_RS10630	SM00363	S4 RNA-binding domain
AL537_RS10685	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10775	SM00448	cheY-homologous receiver domain
AL537_RS10780	SM00387	Histidine kinase-like ATPases
AL537_RS10800	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10805	SM00382	ATPases associated with a variety of cellular activities
AL537_RS10830	SM00267	diguanylate cyclase
AL537_RS10845	SM00919	Malic enzyme, NAD binding domain
AL537_RS10845	SM01274	AL537_RS10845
AL537_RS10850	SM00487	DEAD-like helicases superfamily
AL537_RS10850	SM00490	helicase superfamily c-terminal domain
AL537_RS10935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS10935	SM00866	AL537_RS10935
AL537_RS10950	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL537_RS10975	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS11005	SM00873	B3/4 domain
AL537_RS11005	SM00874	tRNA synthetase B5 domain
AL537_RS11005	SM00896	Ferredoxin-fold anticodon binding domain
AL537_RS11015	SM00411	bacterial (prokaryotic) histone like domain
AL537_RS11050	SM00479	AL537_RS11050
AL537_RS11060	SM00954	Region found in RelA / SpoT proteins
AL537_RS11285	SM00855	Phosphoglycerate mutase family
AL537_RS11305	SM00382	ATPases associated with a variety of cellular activities
AL537_RS11350	SM00245	tail specific protease
AL537_RS11390	SM01130	AL537_RS11390
AL537_RS11395	SM00382	ATPases associated with a variety of cellular activities
AL537_RS11420	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AL537_RS11430	SM00382	ATPases associated with a variety of cellular activities
AL537_RS11435	SM00382	ATPases associated with a variety of cellular activities
AL537_RS11510	SM00052	Putative diguanylate phosphodiesterase
AL537_RS11520	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL537_RS11540	SM01266	AL537_RS11540
AL537_RS11555	SM00387	Histidine kinase-like ATPases
AL537_RS11555	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS11555	SM00448	cheY-homologous receiver domain
AL537_RS11560	SM00052	Putative diguanylate phosphodiesterase
AL537_RS11560	SM00267	diguanylate cyclase
AL537_RS11570	SM00028	Tetratricopeptide repeats
AL537_RS11645	SM00387	Histidine kinase-like ATPases
AL537_RS11645	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS11650	SM00448	cheY-homologous receiver domain
AL537_RS11650	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS11660	SM00822	AL537_RS11660
AL537_RS11665	SM01236	AL537_RS11665
AL537_RS11690	SM00382	ATPases associated with a variety of cellular activities
AL537_RS11695	SM00100	Cyclic nucleotide-monophosphate binding domain
AL537_RS11695	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS11700	SM00479	AL537_RS11700
AL537_RS11735	SM00028	Tetratricopeptide repeats
AL537_RS11760	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL537_RS11760	SM01134	AL537_RS11760
AL537_RS11800	SM00100	Cyclic nucleotide-monophosphate binding domain
AL537_RS11800	SM00387	Histidine kinase-like ATPases
AL537_RS11805	SM00448	cheY-homologous receiver domain
AL537_RS11810	SM00052	Putative diguanylate phosphodiesterase
AL537_RS11810	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL537_RS11810	SM00091	PAS domain
AL537_RS11810	SM00267	diguanylate cyclase
AL537_RS11815	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL537_RS11845	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
AL537_RS11850	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL537_RS11875	SM00382	ATPases associated with a variety of cellular activities
AL537_RS11900	SM00382	ATPases associated with a variety of cellular activities
AL537_RS11905	SM00382	ATPases associated with a variety of cellular activities
AL537_RS11945	SM00267	diguanylate cyclase
AL537_RS11945	SM01079	AL537_RS11945
AL537_RS11950	SM00479	AL537_RS11950
AL537_RS11985	SM00382	ATPases associated with a variety of cellular activities
AL537_RS11985	SM00487	DEAD-like helicases superfamily
AL537_RS11985	SM00490	helicase superfamily c-terminal domain
AL537_RS11985	SM00847	Helicase associated domain (HA2)  Add an annotation
AL537_RS12060	SM00382	ATPases associated with a variety of cellular activities
AL537_RS12060	SM00448	cheY-homologous receiver domain
AL537_RS12120	SM00448	cheY-homologous receiver domain
AL537_RS12125	SM00267	diguanylate cyclase
AL537_RS12140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS12170	SM01144	AL537_RS12170
AL537_RS12185	SM00852	Probable molybdopterin binding domain
AL537_RS12195	SM00382	ATPases associated with a variety of cellular activities
AL537_RS12210	SM00382	ATPases associated with a variety of cellular activities
AL537_RS12210	SM00448	cheY-homologous receiver domain
AL537_RS12215	SM00387	Histidine kinase-like ATPases
AL537_RS12215	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS12225	SM00382	ATPases associated with a variety of cellular activities
AL537_RS12260	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL537_RS12320	SM00382	ATPases associated with a variety of cellular activities
AL537_RS12350	SM00100	Cyclic nucleotide-monophosphate binding domain
AL537_RS12350	SM00419	helix_turn_helix, cAMP Regulatory protein
AL537_RS12400	SM00897	FIST N domain
AL537_RS12400	SM01204	AL537_RS12400
AL537_RS12405	SM00387	Histidine kinase-like ATPases
AL537_RS12405	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS12405	SM00448	cheY-homologous receiver domain
AL537_RS12640	SM00382	ATPases associated with a variety of cellular activities
AL537_RS12650	SM00981	AL537_RS12650
AL537_RS12860	SM00507	HNH nucleases
AL537_RS12940	SM00482	DNA polymerase A domain
AL537_RS12945	SM00493	AL537_RS12945
AL537_RS12945	SM00778	Zinc-binding domain of primase-helicase
AL537_RS13000	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
AL537_RS13000	SM00245	tail specific protease
AL537_RS13005	SM00945	ProQ/FINO family
AL537_RS13015	SM00382	ATPases associated with a variety of cellular activities
AL537_RS13035	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS13070	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS13085	SM00382	ATPases associated with a variety of cellular activities
AL537_RS13110	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS13115	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
AL537_RS13135	SM00112	Cadherin repeats.
AL537_RS13135	SM00237	Domains in Na-Ca exchangers and integrin-beta4
AL537_RS13135	SM00327	von Willebrand factor (vWF) type A domain
AL537_RS13135	SM00736	Dystroglycan-type cadherin-like domains.
AL537_RS13155	SM00028	Tetratricopeptide repeats
AL537_RS13155	SM00267	diguanylate cyclase
AL537_RS13180	SM00020	Trypsin-like serine protease
AL537_RS13180	SM00495	Chitin-binding domain type 3
AL537_RS13215	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS13215	SM00895	AL537_RS13215
AL537_RS13315	SM00382	ATPases associated with a variety of cellular activities
AL537_RS13370	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL537_RS13475	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS13500	SM00382	ATPases associated with a variety of cellular activities
AL537_RS13525	SM01350	AL537_RS13525
AL537_RS13540	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS13540	SM00871	Bacterial transcription activator, effector binding domain
AL537_RS13550	SM00448	cheY-homologous receiver domain
AL537_RS13555	SM00091	PAS domain
AL537_RS13555	SM00387	Histidine kinase-like ATPases
AL537_RS13645	SM00155	Phospholipase D. Active site motifs.
AL537_RS13690	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
AL537_RS13770	SM00052	Putative diguanylate phosphodiesterase
AL537_RS13785	SM00422	helix_turn_helix, mercury resistance
AL537_RS13815	SM01068	Putative carbohydrate binding domain
AL537_RS13820	SM00100	Cyclic nucleotide-monophosphate binding domain
AL537_RS13820	SM00419	helix_turn_helix, cAMP Regulatory protein
AL537_RS14170	SM00357	Cold shock protein domain
AL537_RS14240	SM00287	Bacterial SH3 domain homologues
AL537_RS14285	SM00091	PAS domain
AL537_RS14285	SM00382	ATPases associated with a variety of cellular activities
AL537_RS14320	SM00387	Histidine kinase-like ATPases
AL537_RS14320	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS14320	SM00448	cheY-homologous receiver domain
AL537_RS14345	SM00052	Putative diguanylate phosphodiesterase
AL537_RS14615	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS14650	SM00357	Cold shock protein domain
AL537_RS14675	SM00052	Putative diguanylate phosphodiesterase
AL537_RS14675	SM00448	cheY-homologous receiver domain
AL537_RS14680	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS14680	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS14695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS14720	SM00100	Cyclic nucleotide-monophosphate binding domain
AL537_RS14720	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS14725	SM00479	AL537_RS14725
AL537_RS14730	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS14730	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS14740	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL537_RS14745	SM00421	helix_turn_helix, Lux Regulon
AL537_RS14745	SM00448	cheY-homologous receiver domain
AL537_RS14750	SM00387	Histidine kinase-like ATPases
AL537_RS14750	SM01049	AL537_RS14750
AL537_RS14780	SM00849	Metallo-beta-lactamase superfamily
AL537_RS14870	SM00434	DNA Topoisomerase IV
AL537_RS14895	SM00852	Probable molybdopterin binding domain
AL537_RS14950	SM00278	Helix-hairpin-helix DNA-binding motif class 1
AL537_RS14950	SM00465	GIY-YIG type nucleases (URI domain)
AL537_RS14955	SM00421	helix_turn_helix, Lux Regulon
AL537_RS14955	SM00448	cheY-homologous receiver domain
AL537_RS14960	SM00486	DNA polymerase type-B family
AL537_RS14970	SM00841	Elongation factor P, C-terminal
AL537_RS14970	SM01185	AL537_RS14970
AL537_RS14980	SM00363	S4 RNA-binding domain
AL537_RS14995	SM00481	DNA polymerase alpha chain like domain
AL537_RS15035	SM00100	Cyclic nucleotide-monophosphate binding domain
AL537_RS15035	SM00419	helix_turn_helix, cAMP Regulatory protein
AL537_RS15060	SM00387	Histidine kinase-like ATPases
AL537_RS15060	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS15060	SM00448	cheY-homologous receiver domain
AL537_RS15115	SM00052	Putative diguanylate phosphodiesterase
AL537_RS15115	SM00091	PAS domain
AL537_RS15120	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL537_RS15135	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS15135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS15145	SM00448	cheY-homologous receiver domain
AL537_RS15145	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS15150	SM00387	Histidine kinase-like ATPases
AL537_RS15150	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS15155	SM00220	Serine/Threonine protein kinases, catalytic domain
AL537_RS15155	SM00364	Leucine-rich repeats, bacterial type
AL537_RS15155	SM00369	Leucine-rich repeats, typical (most populated) subfamily
AL537_RS15195	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS15205	SM00382	ATPases associated with a variety of cellular activities
AL537_RS15270	SM00421	helix_turn_helix, Lux Regulon
AL537_RS15270	SM00448	cheY-homologous receiver domain
AL537_RS15275	SM00387	Histidine kinase-like ATPases
AL537_RS15275	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS15290	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL537_RS15330	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
AL537_RS15335	SM00028	Tetratricopeptide repeats
AL537_RS15345	SM00411	bacterial (prokaryotic) histone like domain
AL537_RS15350	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS15365	SM00822	AL537_RS15365
AL537_RS15380	SM00481	DNA polymerase alpha chain like domain
AL537_RS15385	SM00260	Two component signalling adaptor domain
AL537_RS15385	SM00448	cheY-homologous receiver domain
AL537_RS15460	SM00825	Beta-ketoacyl synthase
AL537_RS15470	SM00822	AL537_RS15470
AL537_RS15475	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
AL537_RS15505	SM00363	S4 RNA-binding domain
AL537_RS15510	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS15525	SM00226	Low molecular weight phosphatase family
AL537_RS15560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS15585	SM00267	diguanylate cyclase
AL537_RS15590	SM00642	Alpha-amylase domain
AL537_RS15595	SM00382	ATPases associated with a variety of cellular activities
AL537_RS15640	SM00382	ATPases associated with a variety of cellular activities
AL537_RS15645	SM00382	ATPases associated with a variety of cellular activities
AL537_RS15680	SM00852	Probable molybdopterin binding domain
AL537_RS15685	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL537_RS15700	SM00382	ATPases associated with a variety of cellular activities
AL537_RS15700	SM00448	cheY-homologous receiver domain
AL537_RS15705	SM00487	DEAD-like helicases superfamily
AL537_RS15705	SM00490	helicase superfamily c-terminal domain
AL537_RS15740	SM00900	AL537_RS15740
AL537_RS15750	SM00478	endonuclease III
AL537_RS15750	SM00525	AL537_RS15750
AL537_RS15775	SM00479	AL537_RS15775
AL537_RS15985	SM00974	AL537_RS15985
AL537_RS16055	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL537_RS16110	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
AL537_RS16110	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
AL537_RS16110	SM00493	AL537_RS16110
AL537_RS16135	SM00870	AL537_RS16135
AL537_RS16155	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL537_RS16190	SM00098	Alkaline phosphatase homologues
AL537_RS16255	SM00493	AL537_RS16255
AL537_RS16265	SM00382	ATPases associated with a variety of cellular activities
AL537_RS16285	SM00448	cheY-homologous receiver domain
AL537_RS16335	SM00859	Semialdehyde dehydrogenase, NAD binding domain
AL537_RS16350	SM00825	Beta-ketoacyl synthase
AL537_RS16400	SM00463	Small MutS-related domain
AL537_RS16405	SM00855	Phosphoglycerate mutase family
AL537_RS16495	SM00382	ATPases associated with a variety of cellular activities
AL537_RS16505	SM00260	Two component signalling adaptor domain
AL537_RS16510	SM00260	Two component signalling adaptor domain
AL537_RS16520	SM00448	cheY-homologous receiver domain
AL537_RS16525	SM00073	Histidine Phosphotransfer domain
AL537_RS16525	SM00260	Two component signalling adaptor domain
AL537_RS16525	SM00387	Histidine kinase-like ATPases
AL537_RS16525	SM01231	AL537_RS16525
AL537_RS16535	SM00448	cheY-homologous receiver domain
AL537_RS16550	SM00382	ATPases associated with a variety of cellular activities
AL537_RS16550	SM00962	SRP54-type protein, GTPase domain
AL537_RS16610	SM00382	ATPases associated with a variety of cellular activities
AL537_RS16625	SM00448	cheY-homologous receiver domain
AL537_RS16625	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS16680	SM00382	ATPases associated with a variety of cellular activities
AL537_RS16695	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS16695	SM00871	Bacterial transcription activator, effector binding domain
AL537_RS16705	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL537_RS16755	SM00829	Enoylreductase
AL537_RS16760	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS16790	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS16800	SM00382	ATPases associated with a variety of cellular activities
AL537_RS16810	SM00344	helix_turn_helix ASNC type
AL537_RS16825	SM00360	RNA recognition motif
AL537_RS16850	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS16855	SM00421	helix_turn_helix, Lux Regulon
AL537_RS16865	SM00387	Histidine kinase-like ATPases
AL537_RS16870	SM00448	cheY-homologous receiver domain
AL537_RS16885	SM00052	Putative diguanylate phosphodiesterase
AL537_RS16885	SM00267	diguanylate cyclase
AL537_RS16890	SM00382	ATPases associated with a variety of cellular activities
AL537_RS16975	SM00470	ParB-like nuclease domain
AL537_RS16995	SM00382	ATPases associated with a variety of cellular activities
AL537_RS17000	SM00382	ATPases associated with a variety of cellular activities
AL537_RS17020	SM00387	Histidine kinase-like ATPases
AL537_RS17020	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS17020	SM00448	cheY-homologous receiver domain
AL537_RS17045	SM00382	ATPases associated with a variety of cellular activities
AL537_RS17065	SM00387	Histidine kinase-like ATPases
AL537_RS17070	SM00448	cheY-homologous receiver domain
AL537_RS17070	SM00850	LytTr DNA-binding domain
AL537_RS17085	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS17085	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS17085	SM01049	AL537_RS17085
AL537_RS17110	SM00382	ATPases associated with a variety of cellular activities
AL537_RS17115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS17165	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS17165	SM01009	AlkA N-terminal domain
AL537_RS17210	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
AL537_RS17210	SM00495	Chitin-binding domain type 3
AL537_RS17210	SM00636	AL537_RS17210
AL537_RS17230	SM00267	diguanylate cyclase
AL537_RS17250	SM00849	Metallo-beta-lactamase superfamily
AL537_RS17270	SM00267	diguanylate cyclase
AL537_RS17285	SM00829	Enoylreductase
AL537_RS17315	SM00344	helix_turn_helix ASNC type
AL537_RS17320	SM00495	Chitin-binding domain type 3
AL537_RS17375	SM00506	Appr-1"-p processing enzyme
AL537_RS17450	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS17505	SM00014	Acid phosphatase homologues
AL537_RS17535	SM00382	ATPases associated with a variety of cellular activities
AL537_RS17640	SM00448	cheY-homologous receiver domain
AL537_RS17640	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS17645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS17645	SM00387	Histidine kinase-like ATPases
AL537_RS17645	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS17715	SM00382	ATPases associated with a variety of cellular activities
AL537_RS17755	SM00849	Metallo-beta-lactamase superfamily
AL537_RS17780	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS17805	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL537_RS17805	SM00387	Histidine kinase-like ATPases
AL537_RS17810	SM00382	ATPases associated with a variety of cellular activities
AL537_RS17810	SM00448	cheY-homologous receiver domain
AL537_RS17815	SM00267	diguanylate cyclase
AL537_RS17905	SM00267	diguanylate cyclase
AL537_RS17905	SM01079	AL537_RS17905
AL537_RS17915	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS17925	SM00267	diguanylate cyclase
AL537_RS17960	SM01266	AL537_RS17960
AL537_RS18020	SM01057	Eukaryotic-type carbonic anhydrase
AL537_RS18060	SM00354	helix_turn _helix lactose operon repressor
AL537_RS18085	SM00382	ATPases associated with a variety of cellular activities
AL537_RS18095	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS18095	SM00866	AL537_RS18095
AL537_RS18125	SM00631	AL537_RS18125
AL537_RS18200	SM00858	AL537_RS18200
AL537_RS18275	SM01240	AL537_RS18275
AL537_RS18290	SM00450	Rhodanese Homology Domain
AL537_RS18295	SM00883	Chaperonin 10 Kd subunit
AL537_RS18335	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS18405	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL537_RS18405	SM01134	AL537_RS18405
AL537_RS18475	SM00382	ATPases associated with a variety of cellular activities
AL537_RS18515	SM00838	Elongation factor G C-terminus
AL537_RS18515	SM00889	Elongation factor G, domain IV
AL537_RS18525	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
AL537_RS18550	SM00422	helix_turn_helix, mercury resistance
AL537_RS18560	SM00028	Tetratricopeptide repeats
AL537_RS18565	SM01022	AL537_RS18565
AL537_RS18575	SM00155	Phospholipase D. Active site motifs.
AL537_RS18605	SM00382	ATPases associated with a variety of cellular activities
AL537_RS18630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS18630	SM00866	AL537_RS18630
AL537_RS18660	SM00421	helix_turn_helix, Lux Regulon
AL537_RS18680	SM00870	AL537_RS18680
AL537_RS18685	SM00788	Adenylosuccinate synthetase
AL537_RS18735	SM00344	helix_turn_helix ASNC type
AL537_RS18755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS18770	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS18785	SM00829	Enoylreductase
AL537_RS18815	SM00487	DEAD-like helicases superfamily
AL537_RS18815	SM00490	helicase superfamily c-terminal domain
AL537_RS18860	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS18860	SM00871	Bacterial transcription activator, effector binding domain
AL537_RS18895	SM00822	AL537_RS18895
AL537_RS18910	SM00354	helix_turn _helix lactose operon repressor
AL537_RS18925	SM00640	Glycosyl hydrolases family 32
AL537_RS18950	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL537_RS18980	SM00357	Cold shock protein domain
AL537_RS19025	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS19025	SM00387	Histidine kinase-like ATPases
AL537_RS19025	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS19030	SM00448	cheY-homologous receiver domain
AL537_RS19030	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS19035	SM01065	Starch binding domain
AL537_RS19075	SM00563	Phosphate acyltransferases
AL537_RS19085	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS19090	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
AL537_RS19105	SM00924	MgtE intracellular N domain
AL537_RS19125	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS19140	SM00448	cheY-homologous receiver domain
AL537_RS19140	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS19145	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS19145	SM00387	Histidine kinase-like ATPases
AL537_RS19145	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS19155	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS19170	SM00344	helix_turn_helix ASNC type
AL537_RS19195	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
AL537_RS19200	SM00387	Histidine kinase-like ATPases
AL537_RS19200	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS19200	SM00448	cheY-homologous receiver domain
AL537_RS19225	SM00465	GIY-YIG type nucleases (URI domain)
AL537_RS19240	SM00387	Histidine kinase-like ATPases
AL537_RS19240	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS19240	SM00448	cheY-homologous receiver domain
AL537_RS19245	SM00347	helix_turn_helix multiple antibiotic resistance protein
AL537_RS19270	SM00344	helix_turn_helix ASNC type
AL537_RS19325	SM00822	AL537_RS19325
AL537_RS19360	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL537_RS19375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS19375	SM00387	Histidine kinase-like ATPases
AL537_RS19380	SM00421	helix_turn_helix, Lux Regulon
AL537_RS19380	SM00448	cheY-homologous receiver domain
AL537_RS19415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS19450	SM00091	PAS domain
AL537_RS19450	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS19455	SM00861	Transketolase, pyrimidine binding domain
AL537_RS19480	SM00636	AL537_RS19480
AL537_RS19485	SM00052	Putative diguanylate phosphodiesterase
AL537_RS19485	SM00267	diguanylate cyclase
AL537_RS19490	SM00450	Rhodanese Homology Domain
AL537_RS19515	SM00852	Probable molybdopterin binding domain
AL537_RS19555	SM00448	cheY-homologous receiver domain
AL537_RS19570	SM01240	AL537_RS19570
AL537_RS19595	SM00028	Tetratricopeptide repeats
AL537_RS19595	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS19615	SM00736	Dystroglycan-type cadherin-like domains.
AL537_RS19620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS19675	SM00382	ATPases associated with a variety of cellular activities
AL537_RS19680	SM00382	ATPases associated with a variety of cellular activities
AL537_RS19680	SM01086	C-terminal, D2-small domain, of ClpB protein
AL537_RS19715	SM00220	Serine/Threonine protein kinases, catalytic domain
AL537_RS19750	SM00344	helix_turn_helix ASNC type
AL537_RS19770	SM00240	Forkhead associated domain
AL537_RS19870	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS19880	SM00822	AL537_RS19880
AL537_RS19930	SM00893	Electron transfer flavoprotein domain
AL537_RS19935	SM00893	Electron transfer flavoprotein domain
AL537_RS19950	SM00382	ATPases associated with a variety of cellular activities
AL537_RS19975	SM00382	ATPases associated with a variety of cellular activities
AL537_RS20040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
AL537_RS20045	SM01266	AL537_RS20045
AL537_RS20060	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL537_RS20060	SM00091	PAS domain
AL537_RS20060	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS20060	SM00387	Histidine kinase-like ATPases
AL537_RS20060	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS20060	SM00448	cheY-homologous receiver domain
AL537_RS20070	SM00878	Biotin carboxylase C-terminal domain
AL537_RS20090	SM00422	helix_turn_helix, mercury resistance
AL537_RS20125	SM00822	AL537_RS20125
AL537_RS20130	SM00267	diguanylate cyclase
AL537_RS20160	SM00382	ATPases associated with a variety of cellular activities
AL537_RS20175	SM00244	prohibitin homologues
AL537_RS20185	SM00052	Putative diguanylate phosphodiesterase
AL537_RS20185	SM00091	PAS domain
AL537_RS20185	SM00267	diguanylate cyclase
AL537_RS20195	SM00387	Histidine kinase-like ATPases
AL537_RS20195	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS20195	SM00448	cheY-homologous receiver domain
AL537_RS20205	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
AL537_RS20255	SM00052	Putative diguanylate phosphodiesterase
AL537_RS20255	SM00267	diguanylate cyclase
AL537_RS20265	SM00382	ATPases associated with a variety of cellular activities
AL537_RS20285	SM00354	helix_turn _helix lactose operon repressor
AL537_RS20325	SM00382	ATPases associated with a variety of cellular activities
AL537_RS20330	SM00422	helix_turn_helix, mercury resistance
AL537_RS20335	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS20380	SM00851	MGS-like domain
AL537_RS20390	SM00073	Histidine Phosphotransfer domain
AL537_RS20390	SM00387	Histidine kinase-like ATPases
AL537_RS20390	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS20390	SM00448	cheY-homologous receiver domain
AL537_RS20405	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS20445	SM00327	von Willebrand factor (vWF) type A domain
AL537_RS20450	SM00327	von Willebrand factor (vWF) type A domain
AL537_RS20470	SM00046	Diacylglycerol kinase catalytic domain (presumed)
AL537_RS20485	SM00990	AL537_RS20485
AL537_RS20530	SM00387	Histidine kinase-like ATPases
AL537_RS20530	SM00448	cheY-homologous receiver domain
AL537_RS20615	SM00487	DEAD-like helicases superfamily
AL537_RS20675	SM00052	Putative diguanylate phosphodiesterase
AL537_RS20675	SM00448	cheY-homologous receiver domain
AL537_RS20680	SM00267	diguanylate cyclase
AL537_RS20690	SM00421	helix_turn_helix, Lux Regulon
AL537_RS20690	SM00448	cheY-homologous receiver domain
AL537_RS20695	SM00260	Two component signalling adaptor domain
AL537_RS20695	SM00448	cheY-homologous receiver domain
AL537_RS20770	SM00704	CDGSH-type zinc finger. Function unknown.
AL537_RS20785	SM00953	AL537_RS20785
AL537_RS20830	SM00924	MgtE intracellular N domain
AL537_RS20870	SM00422	helix_turn_helix, mercury resistance
AL537_RS20900	SM00382	ATPases associated with a variety of cellular activities
AL537_RS20905	SM00479	AL537_RS20905
AL537_RS20925	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS20945	SM00849	Metallo-beta-lactamase superfamily
AL537_RS20975	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS21025	SM00354	helix_turn _helix lactose operon repressor
AL537_RS21040	SM00052	Putative diguanylate phosphodiesterase
AL537_RS21050	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS21050	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL537_RS21060	SM00382	ATPases associated with a variety of cellular activities
AL537_RS21075	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS21085	SM00495	Chitin-binding domain type 3
AL537_RS21085	SM00636	AL537_RS21085
AL537_RS21125	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS21140	SM00487	DEAD-like helicases superfamily
AL537_RS21140	SM00490	helicase superfamily c-terminal domain
AL537_RS21145	SM00052	Putative diguanylate phosphodiesterase
AL537_RS21165	SM00867	YceI-like domain 
AL537_RS21170	SM00116	Domain in cystathionine beta-synthase and other proteins.
AL537_RS21210	SM00782	PhnA Zinc-Ribbon
AL537_RS21275	SM00271	DnaJ molecular chaperone homology domain
AL537_RS21285	SM00052	Putative diguanylate phosphodiesterase
AL537_RS21285	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL537_RS21285	SM00267	diguanylate cyclase
AL537_RS21300	SM00382	ATPases associated with a variety of cellular activities
AL537_RS21315	SM00797	Allophanate hydrolase subunit 2
AL537_RS21320	SM00796	Allophanate hydrolase subunit 1
AL537_RS21330	SM00091	PAS domain
AL537_RS21330	SM00267	diguanylate cyclase
AL537_RS21330	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS21355	SM00881	CoA binding domain
AL537_RS21420	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS21465	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS21615	SM00448	cheY-homologous receiver domain
AL537_RS21615	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS21620	SM00387	Histidine kinase-like ATPases
AL537_RS21620	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS21630	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
AL537_RS21630	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
AL537_RS21645	SM00267	diguanylate cyclase
AL537_RS21655	SM00267	diguanylate cyclase
AL537_RS21655	SM00448	cheY-homologous receiver domain
AL537_RS21665	SM00382	ATPases associated with a variety of cellular activities
AL537_RS21705	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS21750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL537_RS21760	SM00450	Rhodanese Homology Domain
AL537_RS21805	SM00421	helix_turn_helix, Lux Regulon
AL537_RS21805	SM00448	cheY-homologous receiver domain
AL537_RS21810	SM00387	Histidine kinase-like ATPases
AL537_RS21930	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL537_RS21930	SM00267	diguanylate cyclase
AL537_RS21965	SM00880	AL537_RS21965
AL537_RS21980	SM00642	Alpha-amylase domain
AL537_RS22200	SM00482	DNA polymerase A domain
AL537_RS22205	SM00493	AL537_RS22205
AL537_RS22205	SM00778	Zinc-binding domain of primase-helicase
AL537_RS22225	SM01311	AL537_RS22225
AL537_RS22235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS22235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS22240	SM01005	Alanine racemase, C-terminal domain
AL537_RS22280	SM00382	ATPases associated with a variety of cellular activities
AL537_RS22350	SM00382	ATPases associated with a variety of cellular activities
AL537_RS22350	SM01086	C-terminal, D2-small domain, of ClpB protein
AL537_RS22395	SM00331	Sigma factor PP2C-like phosphatases
AL537_RS22395	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
AL537_RS22425	SM00240	Forkhead associated domain
AL537_RS22430	SM00220	Serine/Threonine protein kinases, catalytic domain
AL537_RS22450	SM00331	Sigma factor PP2C-like phosphatases
AL537_RS22450	SM00448	cheY-homologous receiver domain
AL537_RS22485	SM00382	ATPases associated with a variety of cellular activities
AL537_RS22505	SM01012	AL537_RS22505
AL537_RS22525	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL537_RS22545	SM00028	Tetratricopeptide repeats
AL537_RS22545	SM00267	diguanylate cyclase
AL537_RS22565	SM00871	Bacterial transcription activator, effector binding domain
AL537_RS22570	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS22575	SM00448	cheY-homologous receiver domain
AL537_RS22575	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS22620	SM00861	Transketolase, pyrimidine binding domain
AL537_RS22630	SM00893	Electron transfer flavoprotein domain
AL537_RS22640	SM00112	Cadherin repeats.
AL537_RS22640	SM00327	von Willebrand factor (vWF) type A domain
AL537_RS22680	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS22680	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
AL537_RS22685	SM00382	ATPases associated with a variety of cellular activities
AL537_RS22775	SM00822	AL537_RS22775
AL537_RS22810	SM00422	helix_turn_helix, mercury resistance
AL537_RS22860	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS22885	SM00382	ATPases associated with a variety of cellular activities
AL537_RS22895	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
AL537_RS22895	SM00091	PAS domain
AL537_RS22895	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS22910	SM00052	Putative diguanylate phosphodiesterase
AL537_RS22910	SM00267	diguanylate cyclase
AL537_RS22915	SM00487	DEAD-like helicases superfamily
AL537_RS22915	SM00490	helicase superfamily c-terminal domain
AL537_RS22920	SM00357	Cold shock protein domain
AL537_RS22920	SM00955	AL537_RS22920
AL537_RS22925	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS22950	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS22955	SM00382	ATPases associated with a variety of cellular activities
AL537_RS22960	SM00052	Putative diguanylate phosphodiesterase
AL537_RS22965	SM00346	helix_turn_helix isocitrate lyase regulation
AL537_RS22980	SM00487	DEAD-like helicases superfamily
AL537_RS22980	SM00490	helicase superfamily c-terminal domain
AL537_RS22985	SM00833	Cobalamin synthesis protein cobW C-terminal domain
AL537_RS23005	SM00357	Cold shock protein domain
AL537_RS23010	SM00316	Ribosomal protein S1-like RNA-binding domain
AL537_RS23010	SM00357	Cold shock protein domain
AL537_RS23010	SM00955	AL537_RS23010
AL537_RS23030	SM00487	DEAD-like helicases superfamily
AL537_RS23030	SM00490	helicase superfamily c-terminal domain
AL537_RS23035	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS23065	SM00357	Cold shock protein domain
AL537_RS23080	SM00244	prohibitin homologues
AL537_RS23085	SM00244	prohibitin homologues
AL537_RS23105	SM00822	AL537_RS23105
AL537_RS23160	SM01004	Delta-aminolevulinic acid dehydratase
AL537_RS23170	SM00421	helix_turn_helix, Lux Regulon
AL537_RS23290	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS23290	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS23300	SM00382	ATPases associated with a variety of cellular activities
AL537_RS23320	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS23320	SM00267	diguanylate cyclase
AL537_RS23330	SM00357	Cold shock protein domain
AL537_RS23335	SM01322	AL537_RS23335
AL537_RS23425	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS23490	SM00052	Putative diguanylate phosphodiesterase
AL537_RS23490	SM00267	diguanylate cyclase
AL537_RS23525	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS23525	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS23545	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS23550	SM00481	DNA polymerase alpha chain like domain
AL537_RS23585	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL537_RS23595	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS23620	SM00382	ATPases associated with a variety of cellular activities
AL537_RS23640	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
AL537_RS23685	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL537_RS23685	SM00267	diguanylate cyclase
AL537_RS23730	SM00382	ATPases associated with a variety of cellular activities
AL537_RS23755	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
AL537_RS23760	SM00642	Alpha-amylase domain
AL537_RS23765	SM00422	helix_turn_helix, mercury resistance
AL537_RS23805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS23805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS23840	SM01007	Class II Aldolase and Adducin N-terminal domain
AL537_RS23855	SM00420	helix_turn_helix, Deoxyribose operon repressor
AL537_RS23855	SM01134	AL537_RS23855
AL537_RS23870	SM00260	Two component signalling adaptor domain
AL537_RS23870	SM00448	cheY-homologous receiver domain
AL537_RS23890	SM00729	Elongator protein 3, MiaB family, Radical SAM
AL537_RS23920	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24000	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS24040	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24080	SM00635	Bacterial Ig-like domain 2
AL537_RS24110	SM00988	UreE urease accessory protein, N-terminal domain
AL537_RS24150	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24155	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24160	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS24190	SM00528	Domain in histone-like proteins of HNS family
AL537_RS24195	SM01276	AL537_RS24195
AL537_RS24220	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS24250	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24280	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS24400	SM00246	Wiskott Aldrich syndrome homology region 2
AL537_RS24450	SM00849	Metallo-beta-lactamase superfamily
AL537_RS24530	SM00530	Helix-turn-helix XRE-family like proteins 
AL537_RS24540	SM00487	DEAD-like helicases superfamily
AL537_RS24590	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24650	SM01022	AL537_RS24650
AL537_RS24660	SM00829	Enoylreductase
AL537_RS24670	SM01060	AL537_RS24670
AL537_RS24695	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS24720	SM00849	Metallo-beta-lactamase superfamily
AL537_RS24725	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
AL537_RS24725	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24740	SM00052	Putative diguanylate phosphodiesterase
AL537_RS24790	SM00448	cheY-homologous receiver domain
AL537_RS24790	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS24795	SM00387	Histidine kinase-like ATPases
AL537_RS24795	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS24800	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24810	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24835	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24845	SM00421	helix_turn_helix, Lux Regulon
AL537_RS24850	SM00421	helix_turn_helix, Lux Regulon
AL537_RS24860	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS24860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS24885	SM00327	von Willebrand factor (vWF) type A domain
AL537_RS24890	SM00028	Tetratricopeptide repeats
AL537_RS24890	SM00327	von Willebrand factor (vWF) type A domain
AL537_RS24900	SM00267	diguanylate cyclase
AL537_RS24905	SM00382	ATPases associated with a variety of cellular activities
AL537_RS24925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS24925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS24955	SM00487	DEAD-like helicases superfamily
AL537_RS24955	SM00490	helicase superfamily c-terminal domain
AL537_RS24965	SM00257	Lysin motif
AL537_RS24975	SM00422	helix_turn_helix, mercury resistance
AL537_RS24995	SM00028	Tetratricopeptide repeats
AL537_RS25000	SM00267	diguanylate cyclase
AL537_RS25020	SM00382	ATPases associated with a variety of cellular activities
AL537_RS25055	SM00587	ZnF_C4 abd HLH domain containing kinases domain
AL537_RS25075	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS25075	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS25090	SM00382	ATPases associated with a variety of cellular activities
AL537_RS25125	SM01057	Eukaryotic-type carbonic anhydrase
AL537_RS25130	SM00972	Spore Coat Protein U domain
AL537_RS25145	SM00972	Spore Coat Protein U domain
AL537_RS25150	SM00972	Spore Coat Protein U domain
AL537_RS25155	SM00829	Enoylreductase
AL537_RS25165	SM00052	Putative diguanylate phosphodiesterase
AL537_RS25165	SM00267	diguanylate cyclase
AL537_RS25170	SM00062	Bacterial periplasmic substrate-binding proteins
AL537_RS25185	SM00388	His Kinase A (phosphoacceptor) domain
AL537_RS25190	SM00448	cheY-homologous receiver domain
AL537_RS25190	SM00862	Transcriptional regulatory protein, C terminal
AL537_RS25230	SM00481	DNA polymerase alpha chain like domain
AL537_RS25250	SM00020	Trypsin-like serine protease
AL537_RS25260	SM00382	ATPases associated with a variety of cellular activities
AL537_RS25285	SM00382	ATPases associated with a variety of cellular activities
AL537_RS25425	SM00422	helix_turn_helix, mercury resistance
AL537_RS25560	SM00342	helix_turn_helix, arabinose operon control protein
AL537_RS25565	SM00642	Alpha-amylase domain
AL537_RS25570	SM00936	Penicillin-binding protein 5, C-terminal domain 
AL537_RS25585	SM00450	Rhodanese Homology Domain
AL537_RS25600	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
AL537_RS25635	SM00226	Low molecular weight phosphatase family
AL537_RS25700	SM00642	Alpha-amylase domain
AL537_RS25710	SM00642	Alpha-amylase domain
AL537_RS25730	SM00421	helix_turn_helix, Lux Regulon
AL537_RS25770	SM00966	SpoVT / AbrB like domain 
AL537_RS25790	SM00671	Sel1-like repeats.
AL537_RS25795	SM00642	Alpha-amylase domain
AL537_RS25805	SM00642	Alpha-amylase domain
AL537_RS25825	SM00642	Alpha-amylase domain
AL537_RS25830	SM00857	Resolvase, N terminal domain
AL537_RS25875	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
AL537_RS25875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
AL537_RS25880	SM00382	ATPases associated with a variety of cellular activities
