locus-tag class description AL552_RS00040 PF12323 Helix-turn-helix domain AL552_RS00040 PF07282 Putative transposase DNA-binding domain AL552_RS00040 PF01385 Probable transposase AL552_RS00070 PF02195 ParB-like nuclease domain AL552_RS00070 PF17762 HTH domain found in ParB protein AL552_RS00075 PF13614 AAA domain AL552_RS00170 PF00216 Bacterial DNA-binding protein AL552_RS00175 PF00216 Bacterial DNA-binding protein AL552_RS00205 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AL552_RS00265 PF00313 'Cold-shock' DNA-binding domain AL552_RS00340 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS00340 PF00072 Response regulator receiver domain AL552_RS00370 PF07282 Putative transposase DNA-binding domain AL552_RS00370 PF01385 Probable transposase AL552_RS00370 PF12323 Helix-turn-helix domain AL552_RS00390 PF03773 Predicted permease AL552_RS00405 PF00313 'Cold-shock' DNA-binding domain AL552_RS00415 PF06965 Na+/H+ antiporter 1 AL552_RS00435 PF00313 'Cold-shock' DNA-binding domain AL552_RS00735 PF03631 Virulence factor BrkB AL552_RS00740 PF02580 D-Tyr-tRNA(Tyr) deacylase AL552_RS00745 PF00583 Acetyltransferase (GNAT) family AL552_RS00745 PF09500 Putative thioesterase (yiiD_Cterm) AL552_RS00755 PF01293 Phosphoenolpyruvate carboxykinase AL552_RS00760 PF01430 Hsp33 protein AL552_RS00765 PF01479 S4 domain AL552_RS00770 PF11356 Type II secretion system protein C AL552_RS00775 PF00263 Bacterial type II and III secretion system protein AL552_RS00775 PF03958 Bacterial type II/III secretion system short domain AL552_RS00780 PF00437 Type II/IV secretion system protein AL552_RS00785 PF00482 Type II secretion system (T2SS), protein F AL552_RS00790 PF07963 Prokaryotic N-terminal methylation motif AL552_RS00790 PF08334 Type II secretion system (T2SS), protein G AL552_RS00795 PF12019 Type II transport protein GspH AL552_RS00800 PF07963 Prokaryotic N-terminal methylation motif AL552_RS00800 PF02501 Type II secretion system (T2SS), protein I AL552_RS00810 PF03934 Type II secretion system (T2SS), protein K AL552_RS00815 PF12693 GspL periplasmic domain AL552_RS00815 PF05134 Type II secretion system (T2SS), protein L AL552_RS00820 PF04612 Type II secretion system (T2SS), protein M AL552_RS00825 PF01203 Type II secretion system (T2SS), protein N AL552_RS00830 PF00459 Inositol monophosphatase family AL552_RS00835 PF00293 NUDIX domain AL552_RS00840 PF01106 NifU-like domain AL552_RS00840 PF01521 Iron-sulphur cluster biosynthesis AL552_RS00845 PF00156 Phosphoribosyl transferase domain AL552_RS00850 PF00561 alpha/beta hydrolase fold AL552_RS00860 PF00575 S1 RNA binding domain AL552_RS00860 PF17674 HHH domain AL552_RS00860 PF16921 Tex protein YqgF-like domain AL552_RS00860 PF09371 Tex-like protein N-terminal domain AL552_RS00870 PF03449 Transcription elongation factor, N-terminal AL552_RS00870 PF01272 Transcription elongation factor, GreA/GreB, C-term AL552_RS00880 PF00072 Response regulator receiver domain AL552_RS00880 PF00486 Transcriptional regulatory protein, C terminal AL552_RS00885 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS00885 PF00672 HAMP domain AL552_RS00885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS00890 PF00860 Permease family AL552_RS00895 PF00271 Helicase conserved C-terminal domain AL552_RS00895 PF17191 RecG wedge domain AL552_RS00895 PF00270 DEAD/DEAH box helicase AL552_RS00900 PF12105 SpoU, rRNA methylase, C-terminal AL552_RS00900 PF00588 SpoU rRNA Methylase family AL552_RS00905 PF13291 ACT domain AL552_RS00905 PF04607 Region found in RelA / SpoT proteins AL552_RS00905 PF02824 TGS domain AL552_RS00910 PF01192 RNA polymerase Rpb6 AL552_RS00915 PF00625 Guanylate kinase AL552_RS00930 PF02472 Biopolymer transport protein ExbD/TolR AL552_RS00935 PF01618 MotA/TolQ/ExbB proton channel family AL552_RS00950 PF00593 TonB dependent receptor AL552_RS00950 PF07715 TonB-dependent Receptor Plug Domain AL552_RS00960 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS00975 PF00005 ABC transporter AL552_RS00975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS00980 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS00980 PF00005 ABC transporter AL552_RS01000 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL552_RS01005 PF03553 Na+/H+ antiporter family AL552_RS01075 PF03755 YicC-like family, N-terminal region AL552_RS01075 PF08340 Domain of unknown function (DUF1732) AL552_RS01085 PF03725 3' exoribonuclease family, domain 2 AL552_RS01085 PF01138 3' exoribonuclease family, domain 1 AL552_RS01090 PF00156 Phosphoribosyl transferase domain AL552_RS01095 PF03279 Bacterial lipid A biosynthesis acyltransferase AL552_RS01100 PF00440 Bacterial regulatory proteins, tetR family AL552_RS01105 PF02441 Flavoprotein AL552_RS01105 PF04127 DNA / pantothenate metabolism flavoprotein AL552_RS01115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS01115 PF00672 HAMP domain AL552_RS01115 PF17200 Single Cache domain 2 AL552_RS01120 PF04002 RadC-like JAB domain AL552_RS01125 PF00830 Ribosomal L28 family AL552_RS01130 PF00471 Ribosomal protein L33 AL552_RS01140 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AL552_RS01140 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AL552_RS01140 PF06827 Zinc finger found in FPG and IleRS AL552_RS01145 PF05686 Glycosyl transferase family 90 AL552_RS01150 PF01467 Cytidylyltransferase-like AL552_RS01155 PF00534 Glycosyl transferases group 1 AL552_RS01155 PF13439 Glycosyltransferase Family 4 AL552_RS01160 PF00535 Glycosyl transferase family 2 AL552_RS01165 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL552_RS01170 PF01219 Prokaryotic diacylglycerol kinase AL552_RS01180 PF16363 GDP-mannose 4,6 dehydratase AL552_RS01185 PF00483 Nucleotidyl transferase AL552_RS01190 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AL552_RS01195 PF08889 WbqC-like protein family AL552_RS01205 PF00535 Glycosyl transferase family 2 AL552_RS01210 PF00009 Elongation factor Tu GTP binding domain AL552_RS01220 PF01507 Phosphoadenosine phosphosulfate reductase family AL552_RS01225 PF03600 Citrate transporter AL552_RS01225 PF02080 TrkA-C domain AL552_RS01230 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AL552_RS01235 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AL552_RS01245 PF03279 Bacterial lipid A biosynthesis acyltransferase AL552_RS01250 PF01370 NAD dependent epimerase/dehydratase family AL552_RS01255 PF06082 Exopolysaccharide biosynthesis protein YbjH AL552_RS01265 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AL552_RS01280 PF08334 Type II secretion system (T2SS), protein G AL552_RS01280 PF07963 Prokaryotic N-terminal methylation motif AL552_RS01285 PF00437 Type II/IV secretion system protein AL552_RS01285 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL552_RS01290 PF00482 Type II secretion system (T2SS), protein F AL552_RS01295 PF07963 Prokaryotic N-terminal methylation motif AL552_RS01295 PF00114 Pilin (bacterial filament) AL552_RS01300 PF03958 Bacterial type II/III secretion system short domain AL552_RS01300 PF00263 Bacterial type II and III secretion system protein AL552_RS01355 PF00535 Glycosyl transferase family 2 AL552_RS01380 PF00535 Glycosyl transferase family 2 AL552_RS01385 PF02397 Bacterial sugar transferase AL552_RS01395 PF00953 Glycosyl transferase family 4 AL552_RS01425 PF01370 NAD dependent epimerase/dehydratase family AL552_RS01430 PF00534 Glycosyl transferases group 1 AL552_RS01440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AL552_RS01440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AL552_RS01440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AL552_RS01445 PF00483 Nucleotidyl transferase AL552_RS01450 PF00121 Triosephosphate isomerase AL552_RS01475 PF00455 DeoR C terminal sensor domain AL552_RS01475 PF08220 DeoR-like helix-turn-helix domain AL552_RS01480 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AL552_RS01490 PF06005 Cell division protein ZapB AL552_RS01495 PF03737 Aldolase/RraA AL552_RS01500 PF01040 UbiA prenyltransferase family AL552_RS01505 PF07724 AAA domain (Cdc48 subfamily) AL552_RS01505 PF00004 ATPase family associated with various cellular activities (AAA) AL552_RS01510 PF00227 Proteasome subunit AL552_RS01520 PF00356 Bacterial regulatory proteins, lacI family AL552_RS01525 PF00270 DEAD/DEAH box helicase AL552_RS01525 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AL552_RS01525 PF18074 Primosomal protein N C-terminal domain AL552_RS01525 PF17764 3′ DNA-binding domain (3′BD) AL552_RS01525 PF00271 Helicase conserved C-terminal domain AL552_RS01535 PF01197 Ribosomal protein L31 AL552_RS01540 PF00338 Ribosomal protein S10p/S20e AL552_RS01545 PF00297 Ribosomal protein L3 AL552_RS01550 PF00573 Ribosomal protein L4/L1 family AL552_RS01555 PF00276 Ribosomal protein L23 AL552_RS01560 PF00181 Ribosomal Proteins L2, RNA binding domain AL552_RS01560 PF03947 Ribosomal Proteins L2, C-terminal domain AL552_RS01565 PF00203 Ribosomal protein S19 AL552_RS01570 PF00237 Ribosomal protein L22p/L17e AL552_RS01575 PF07650 KH domain AL552_RS01575 PF00189 Ribosomal protein S3, C-terminal domain AL552_RS01580 PF00252 Ribosomal protein L16p/L10e AL552_RS01585 PF00831 Ribosomal L29 protein AL552_RS01590 PF00366 Ribosomal protein S17 AL552_RS01595 PF00238 Ribosomal protein L14p/L23e AL552_RS01600 PF00467 KOW motif AL552_RS01600 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AL552_RS01605 PF00673 ribosomal L5P family C-terminus AL552_RS01605 PF00281 Ribosomal protein L5 AL552_RS01610 PF00253 Ribosomal protein S14p/S29e AL552_RS01615 PF00410 Ribosomal protein S8 AL552_RS01620 PF00347 Ribosomal protein L6 AL552_RS01625 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AL552_RS01630 PF03719 Ribosomal protein S5, C-terminal domain AL552_RS01630 PF00333 Ribosomal protein S5, N-terminal domain AL552_RS01635 PF00327 Ribosomal protein L30p/L7e AL552_RS01640 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AL552_RS01645 PF00344 SecY translocase AL552_RS01650 PF00444 Ribosomal protein L36 AL552_RS01655 PF00416 Ribosomal protein S13/S18 AL552_RS01660 PF00411 Ribosomal protein S11 AL552_RS01665 PF00163 Ribosomal protein S4/S9 N-terminal domain AL552_RS01665 PF01479 S4 domain AL552_RS01670 PF01000 RNA polymerase Rpb3/RpoA insert domain AL552_RS01670 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AL552_RS01670 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AL552_RS01675 PF01196 Ribosomal protein L17 AL552_RS01685 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL552_RS01685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL552_RS01695 PF13673 Acetyltransferase (GNAT) domain AL552_RS01700 PF03880 DbpA RNA binding domain AL552_RS01700 PF00271 Helicase conserved C-terminal domain AL552_RS01700 PF00270 DEAD/DEAH box helicase AL552_RS01710 PF00149 Calcineurin-like phosphoesterase AL552_RS01710 PF02872 5'-nucleotidase, C-terminal domain AL552_RS01720 PF01507 Phosphoadenosine phosphosulfate reductase family AL552_RS01725 PF00009 Elongation factor Tu GTP binding domain AL552_RS01730 PF02080 TrkA-C domain AL552_RS01730 PF03600 Citrate transporter AL552_RS01755 PF00005 ABC transporter AL552_RS01765 PF10795 Protein of unknown function (DUF2607) AL552_RS01770 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AL552_RS01775 PF06526 Protein of unknown function (DUF1107) AL552_RS01780 PF01625 Peptide methionine sulfoxide reductase AL552_RS01785 PF17243 POTRA domain TamA domain 1 AL552_RS01785 PF01103 Surface antigen AL552_RS01790 PF04357 TamB, inner membrane protein subunit of TAM complex AL552_RS01795 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AL552_RS01805 PF00719 Inorganic pyrophosphatase AL552_RS01810 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AL552_RS01820 PF02875 Mur ligase family, glutamate ligase domain AL552_RS01820 PF01225 Mur ligase family, catalytic domain AL552_RS01820 PF08245 Mur ligase middle domain AL552_RS01825 PF02441 Flavoprotein AL552_RS01835 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS01840 PF00005 ABC transporter AL552_RS01845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS01845 PF03466 LysR substrate binding domain AL552_RS01865 PF16868 NMT1-like family AL552_RS01875 PF02863 Arginine repressor, C-terminal domain AL552_RS01875 PF01316 Arginine repressor, DNA binding domain AL552_RS01880 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL552_RS01880 PF00056 lactate/malate dehydrogenase, NAD binding domain AL552_RS01890 PF00348 Polyprenyl synthetase AL552_RS01895 PF00829 Ribosomal prokaryotic L21 protein AL552_RS01900 PF01016 Ribosomal L27 protein AL552_RS01905 PF01018 GTP1/OBG AL552_RS01905 PF01926 50S ribosome-binding GTPase AL552_RS01910 PF06738 Putative threonine/serine exporter AL552_RS01915 PF12821 Threonine/Serine exporter, ThrE AL552_RS01920 PF00186 Dihydrofolate reductase AL552_RS01925 PF00149 Calcineurin-like phosphoesterase AL552_RS01930 PF04379 ApaG domain AL552_RS01935 PF00398 Ribosomal RNA adenine dimethylase AL552_RS01940 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AL552_RS01945 PF09312 SurA N-terminal domain AL552_RS01950 PF04453 LPS transport system D AL552_RS01950 PF03968 OstA-like protein AL552_RS01955 PF00226 DnaJ domain AL552_RS01955 PF05099 Tellurite resistance protein TerB AL552_RS01965 PF00694 Aconitase C-terminal domain AL552_RS01970 PF00330 Aconitase family (aconitate hydratase) AL552_RS01975 PF00180 Isocitrate/isopropylmalate dehydrogenase AL552_RS01980 PF00682 HMGL-like AL552_RS01980 PF08502 LeuA allosteric (dimerisation) domain AL552_RS01995 PF01569 PAP2 superfamily AL552_RS02005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS02005 PF03466 LysR substrate binding domain AL552_RS02015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL552_RS02015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL552_RS02015 PF00205 Thiamine pyrophosphate enzyme, central domain AL552_RS02020 PF10369 Small subunit of acetolactate synthase AL552_RS02025 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS02035 PF02887 Pyruvate kinase, alpha/beta domain AL552_RS02035 PF00224 Pyruvate kinase, barrel domain AL552_RS02045 PF08220 DeoR-like helix-turn-helix domain AL552_RS02045 PF00455 DeoR C terminal sensor domain AL552_RS02050 PF01380 SIS domain AL552_RS02060 PF00072 Response regulator receiver domain AL552_RS02060 PF00486 Transcriptional regulatory protein, C terminal AL552_RS02065 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS02065 PF00672 HAMP domain AL552_RS02070 PF00465 Iron-containing alcohol dehydrogenase AL552_RS02075 PF02733 Dak1 domain AL552_RS02080 PF02734 DAK2 domain AL552_RS02085 PF02896 PEP-utilising enzyme, TIM barrel domain AL552_RS02085 PF05524 PEP-utilising enzyme, N-terminal AL552_RS02085 PF00391 PEP-utilising enzyme, mobile domain AL552_RS02090 PF02954 Bacterial regulatory protein, Fis family AL552_RS02090 PF00989 PAS fold AL552_RS02090 PF00158 Sigma-54 interaction domain AL552_RS02095 PF05068 Mannitol repressor AL552_RS02100 PF08125 Mannitol dehydrogenase C-terminal domain AL552_RS02100 PF01232 Mannitol dehydrogenase Rossmann domain AL552_RS02105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL552_RS02105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL552_RS02105 PF02378 Phosphotransferase system, EIIC AL552_RS02140 PF03180 NLPA lipoprotein AL552_RS02150 PF00140 Sigma-70 factor, region 1.2 AL552_RS02150 PF04542 Sigma-70 region 2 AL552_RS02150 PF03979 Sigma-70 factor, region 1.1 AL552_RS02150 PF04539 Sigma-70 region 3 AL552_RS02150 PF04545 Sigma-70, region 4 AL552_RS02150 PF04546 Sigma-70, non-essential region AL552_RS02155 PF01807 CHC2 zinc finger AL552_RS02155 PF08275 DNA primase catalytic core, N-terminal domain AL552_RS02155 PF08278 DNA primase DnaG DnaB-binding AL552_RS02155 PF10410 DnaB-helicase binding domain of primase AL552_RS02160 PF09424 Yqey-like protein AL552_RS02165 PF01165 Ribosomal protein S21 AL552_RS02170 PF00814 Glycoprotease family AL552_RS02175 PF00561 alpha/beta hydrolase fold AL552_RS02180 PF02660 Glycerol-3-phosphate acyltransferase AL552_RS02185 PF02152 Dihydroneopterin aldolase AL552_RS02190 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL552_RS02195 PF02673 Bacitracin resistance protein BacA AL552_RS02200 PF01966 HD domain AL552_RS02200 PF01743 Poly A polymerase head domain AL552_RS02200 PF12627 Probable RNA and SrmB- binding site of polymerase A AL552_RS02205 PF01471 Putative peptidoglycan binding domain AL552_RS02205 PF13401 AAA domain AL552_RS02220 PF08239 Bacterial SH3 domain AL552_RS02225 PF01384 Phosphate transporter family AL552_RS02230 PF01865 Protein of unknown function DUF47 AL552_RS02235 PF01928 CYTH domain AL552_RS02245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS02245 PF00672 HAMP domain AL552_RS02245 PF02743 Cache domain AL552_RS02255 PF01467 Cytidylyltransferase-like AL552_RS02255 PF00294 pfkB family carbohydrate kinase AL552_RS02260 PF02321 Outer membrane efflux protein AL552_RS02265 PF00293 NUDIX domain AL552_RS02270 PF06853 Protein of unknown function (DUF1249) AL552_RS02275 PF00149 Calcineurin-like phosphoesterase AL552_RS02280 PF05728 Uncharacterised protein family (UPF0227) AL552_RS02285 PF00204 DNA gyrase B AL552_RS02285 PF00986 DNA gyrase B subunit, carboxyl terminus AL552_RS02285 PF01751 Toprim domain AL552_RS02285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS02290 PF00521 DNA gyrase/topoisomerase IV, subunit A AL552_RS02290 PF03989 DNA gyrase C-terminal domain, beta-propeller AL552_RS02295 PF13180 PDZ domain AL552_RS02300 PF00595 PDZ domain AL552_RS02305 PF06295 Protein of unknown function (DUF1043) AL552_RS02315 PF03969 AFG1-like ATPase AL552_RS02325 PF00572 Ribosomal protein L13 AL552_RS02330 PF00380 Ribosomal protein S9/S16 AL552_RS02335 PF00355 Rieske [2Fe-2S] domain AL552_RS02335 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AL552_RS02340 PF00033 Cytochrome b/b6/petB AL552_RS02340 PF00032 Cytochrome b(C-terminal)/b6/petD AL552_RS02345 PF02167 Cytochrome C1 family AL552_RS02350 PF02798 Glutathione S-transferase, N-terminal domain AL552_RS02350 PF00043 Glutathione S-transferase, C-terminal domain AL552_RS02355 PF04386 Stringent starvation protein B AL552_RS02360 PF04972 BON domain AL552_RS02365 PF13580 SIS domain AL552_RS02370 PF02021 Uncharacterised protein family UPF0102 AL552_RS02375 PF04348 LppC putative lipoprotein AL552_RS02380 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL552_RS02395 PF01795 MraW methylase family AL552_RS02400 PF04999 Cell division protein FtsL AL552_RS02405 PF00905 Penicillin binding protein transpeptidase domain AL552_RS02405 PF03717 Penicillin-binding Protein dimerisation domain AL552_RS02410 PF08245 Mur ligase middle domain AL552_RS02410 PF02875 Mur ligase family, glutamate ligase domain AL552_RS02410 PF01225 Mur ligase family, catalytic domain AL552_RS02415 PF02875 Mur ligase family, glutamate ligase domain AL552_RS02415 PF08245 Mur ligase middle domain AL552_RS02415 PF01225 Mur ligase family, catalytic domain AL552_RS02420 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AL552_RS02420 PF00953 Glycosyl transferase family 4 AL552_RS02425 PF08245 Mur ligase middle domain AL552_RS02425 PF02875 Mur ligase family, glutamate ligase domain AL552_RS02430 PF01098 Cell cycle protein AL552_RS02435 PF03033 Glycosyltransferase family 28 N-terminal domain AL552_RS02435 PF04101 Glycosyltransferase family 28 C-terminal domain AL552_RS02440 PF02875 Mur ligase family, glutamate ligase domain AL552_RS02440 PF01225 Mur ligase family, catalytic domain AL552_RS02440 PF08245 Mur ligase middle domain AL552_RS02445 PF08478 POTRA domain, FtsQ-type AL552_RS02445 PF03799 Cell division protein FtsQ AL552_RS02450 PF02491 SHS2 domain inserted in FTSA AL552_RS02455 PF12327 FtsZ family, C-terminal domain AL552_RS02455 PF00091 Tubulin/FtsZ family, GTPase domain AL552_RS02460 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AL552_RS02470 PF07516 SecA Wing and Scaffold domain AL552_RS02470 PF01043 SecA preprotein cross-linking domain AL552_RS02470 PF07517 SecA DEAD-like domain AL552_RS02470 PF02810 SEC-C motif AL552_RS02475 PF00293 NUDIX domain AL552_RS02480 PF01113 Dihydrodipicolinate reductase, N-terminus AL552_RS02480 PF05173 Dihydrodipicolinate reductase, C-terminus AL552_RS02485 PF00117 Glutamine amidotransferase class-I AL552_RS02485 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AL552_RS02490 PF02142 MGS-like domain AL552_RS02490 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL552_RS02490 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL552_RS02510 PF01925 Sulfite exporter TauE/SafE AL552_RS02525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS02525 PF03466 LysR substrate binding domain AL552_RS02530 PF03458 UPF0126 domain AL552_RS02535 PF01497 Periplasmic binding protein AL552_RS02540 PF17113 Regulatory signalling modulator protein AmpE AL552_RS02540 PF03186 CobD/Cbib protein AL552_RS02545 PF01048 Phosphorylase superfamily AL552_RS02555 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS02555 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL552_RS02560 PF01645 Conserved region in glutamate synthase AL552_RS02560 PF04898 Glutamate synthase central domain AL552_RS02560 PF00310 Glutamine amidotransferases class-II AL552_RS02560 PF01493 GXGXG motif AL552_RS02565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AL552_RS02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS02570 PF01645 Conserved region in glutamate synthase AL552_RS02570 PF01493 GXGXG motif AL552_RS02570 PF04898 Glutamate synthase central domain AL552_RS02570 PF00310 Glutamine amidotransferases class-II AL552_RS02575 PF16199 Radical_SAM C-terminal domain AL552_RS02575 PF04055 Radical SAM superfamily AL552_RS02580 PF00563 EAL domain AL552_RS02580 PF01590 GAF domain AL552_RS02580 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS02580 PF00360 Phytochrome region AL552_RS02585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS02585 PF00072 Response regulator receiver domain AL552_RS02585 PF00989 PAS fold AL552_RS02585 PF01627 Hpt domain AL552_RS02585 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS02585 PF18415 Histidine kinase receptor ArcB trans-membrane domain AL552_RS02595 PF00072 Response regulator receiver domain AL552_RS02595 PF00486 Transcriptional regulatory protein, C terminal AL552_RS02610 PF03737 Aldolase/RraA AL552_RS02625 PF00742 Homoserine dehydrogenase AL552_RS02625 PF01842 ACT domain AL552_RS02625 PF03447 Homoserine dehydrogenase, NAD binding domain AL552_RS02625 PF00696 Amino acid kinase family AL552_RS02625 PF13840 ACT domain AL552_RS02630 PF08544 GHMP kinases C terminal AL552_RS02630 PF00288 GHMP kinases N terminal domain AL552_RS02635 PF00291 Pyridoxal-phosphate dependent enzyme AL552_RS02635 PF14821 Threonine synthase N terminus AL552_RS02645 PF01228 Glycine radical AL552_RS02650 PF01261 Xylose isomerase-like TIM barrel AL552_RS02660 PF03167 Uracil DNA glycosylase superfamily AL552_RS02675 PF01235 Sodium:alanine symporter family AL552_RS02680 PF03883 Peroxide stress protein YaaA AL552_RS02685 PF00270 DEAD/DEAH box helicase AL552_RS02685 PF00271 Helicase conserved C-terminal domain AL552_RS02690 PF05175 Methyltransferase small domain AL552_RS02695 PF05525 Branched-chain amino acid transport protein AL552_RS02700 PF00258 Flavodoxin AL552_RS02705 PF02899 Phage integrase, N-terminal SAM-like domain AL552_RS02705 PF00589 Phage integrase family AL552_RS02710 PF10411 Disulfide bond isomerase protein N-terminus AL552_RS02710 PF13098 Thioredoxin-like domain AL552_RS02725 PF01336 OB-fold nucleic acid binding domain AL552_RS02725 PF00152 tRNA synthetases class II (D, K and N) AL552_RS02730 PF00158 Sigma-54 interaction domain AL552_RS02730 PF00072 Response regulator receiver domain AL552_RS02730 PF02954 Bacterial regulatory protein, Fis family AL552_RS02740 PF00248 Aldo/keto reductase family AL552_RS02750 PF02976 DNA mismatch repair enzyme MutH AL552_RS02760 PF00293 NUDIX domain AL552_RS02765 PF01590 GAF domain AL552_RS02765 PF00391 PEP-utilising enzyme, mobile domain AL552_RS02765 PF05524 PEP-utilising enzyme, N-terminal AL552_RS02765 PF02896 PEP-utilising enzyme, TIM barrel domain AL552_RS02770 PF01925 Sulfite exporter TauE/SafE AL552_RS02775 PF01790 Prolipoprotein diacylglyceryl transferase AL552_RS02780 PF00303 Thymidylate synthase AL552_RS02790 PF02690 Na+/Pi-cotransporter AL552_RS02795 PF03466 LysR substrate binding domain AL552_RS02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS02800 PF01022 Bacterial regulatory protein, arsR family AL552_RS02805 PF01649 Ribosomal protein S20 AL552_RS02810 PF03023 Lipid II flippase MurJ AL552_RS02815 PF01687 Riboflavin kinase AL552_RS02815 PF06574 FAD synthetase AL552_RS02820 PF06827 Zinc finger found in FPG and IleRS AL552_RS02820 PF08264 Anticodon-binding domain of tRNA AL552_RS02820 PF00133 tRNA synthetases class I (I, L, M and V) AL552_RS02825 PF01252 Signal peptidase (SPase) II AL552_RS02830 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL552_RS02835 PF02401 LytB protein AL552_RS02845 PF00072 Response regulator receiver domain AL552_RS02845 PF04397 LytTr DNA-binding domain AL552_RS02850 PF06580 Histidine kinase AL552_RS02850 PF07694 5TMR of 5TMR-LYT AL552_RS02855 PF02554 Carbon starvation protein CstA AL552_RS02870 PF01380 SIS domain AL552_RS02875 PF03702 Anhydro-N-acetylmuramic acid kinase AL552_RS02880 PF00933 Glycosyl hydrolase family 3 N terminal domain AL552_RS02885 PF00793 DAHP synthetase I family AL552_RS02890 PF01817 Chorismate mutase type II AL552_RS02890 PF02153 Prephenate dehydrogenase AL552_RS02895 PF01464 Transglycosylase SLT domain AL552_RS02895 PF01551 Peptidase family M23 AL552_RS02895 PF10145 Phage-related minor tail protein AL552_RS02900 PF07238 PilZ domain AL552_RS02905 PF12848 ABC transporter AL552_RS02905 PF00005 ABC transporter AL552_RS02910 PF14718 Soluble lytic murein transglycosylase L domain AL552_RS02910 PF01464 Transglycosylase SLT domain AL552_RS02915 PF01371 Trp repressor protein AL552_RS02920 PF01931 Protein of unknown function DUF84 AL552_RS02925 PF01817 Chorismate mutase type II AL552_RS02925 PF00800 Prephenate dehydratase AL552_RS02930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL552_RS02935 PF01464 Transglycosylase SLT domain AL552_RS02935 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS02940 PF13525 Outer membrane lipoprotein AL552_RS02945 PF00849 RNA pseudouridylate synthase AL552_RS02945 PF01479 S4 domain AL552_RS02950 PF02578 Multi-copper polyphenol oxidoreductase laccase AL552_RS02955 PF00004 ATPase family associated with various cellular activities (AAA) AL552_RS02955 PF17871 AAA lid domain AL552_RS02955 PF07724 AAA domain (Cdc48 subfamily) AL552_RS02955 PF02861 Clp amino terminal domain, pathogenicity island component AL552_RS02955 PF10431 C-terminal, D2-small domain, of ClpB protein AL552_RS03005 PF03411 Penicillin-insensitive murein endopeptidase AL552_RS03015 PF00037 4Fe-4S binding domain AL552_RS03020 PF16325 Peptidase family U32 C-terminal domain AL552_RS03020 PF01136 Peptidase family U32 AL552_RS03025 PF04381 Putative exonuclease, RdgC AL552_RS03035 PF00486 Transcriptional regulatory protein, C terminal AL552_RS03035 PF00072 Response regulator receiver domain AL552_RS03040 PF00989 PAS fold AL552_RS03040 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS03040 PF11808 Phosphate regulon sensor protein PhoR AL552_RS03050 PF02541 Ppx/GppA phosphatase family AL552_RS03055 PF13089 Polyphosphate kinase N-terminal domain AL552_RS03055 PF13090 Polyphosphate kinase C-terminal domain 2 AL552_RS03055 PF02503 Polyphosphate kinase middle domain AL552_RS03055 PF17941 Polyphosphate kinase C-terminal domain 1 AL552_RS03060 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS03065 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS03070 PF00005 ABC transporter AL552_RS03075 PF01895 PhoU domain AL552_RS03080 PF03976 Polyphosphate kinase 2 (PPK2) AL552_RS03085 PF03932 CutC family AL552_RS03095 PF00578 AhpC/TSA family AL552_RS03095 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL552_RS03100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS03100 PF03466 LysR substrate binding domain AL552_RS03105 PF01274 Malate synthase AL552_RS03110 PF00463 Isocitrate lyase family AL552_RS03115 PF00571 CBS domain AL552_RS03130 PF02547 Queuosine biosynthesis protein AL552_RS03135 PF01702 Queuine tRNA-ribosyltransferase AL552_RS03140 PF02699 Preprotein translocase subunit AL552_RS03145 PF07549 SecD/SecF GG Motif AL552_RS03145 PF13721 SecD export protein N-terminal TM region AL552_RS03145 PF02355 Protein export membrane protein AL552_RS03150 PF02355 Protein export membrane protein AL552_RS03150 PF07549 SecD/SecF GG Motif AL552_RS03155 PF00459 Inositol monophosphatase family AL552_RS03165 PF02082 Transcriptional regulator AL552_RS03170 PF00266 Aminotransferase class-V AL552_RS03175 PF01592 NifU-like N terminal domain AL552_RS03180 PF01521 Iron-sulphur cluster biosynthesis AL552_RS03185 PF00226 DnaJ domain AL552_RS03185 PF07743 HSCB C-terminal oligomerisation domain AL552_RS03190 PF00012 Hsp70 protein AL552_RS03195 PF00111 2Fe-2S iron-sulfur cluster binding domain AL552_RS03200 PF04384 Iron-sulphur cluster assembly AL552_RS03205 PF00883 Cytosol aminopeptidase family, catalytic domain AL552_RS03205 PF12404 Peptidase AL552_RS03210 PF00334 Nucleoside diphosphate kinase AL552_RS03215 PF04055 Radical SAM superfamily AL552_RS03225 PF13464 Domain of unknown function (DUF4115) AL552_RS03230 PF04551 GcpE protein AL552_RS03235 PF13393 Histidyl-tRNA synthetase AL552_RS03235 PF03129 Anticodon binding domain AL552_RS03240 PF09976 Tetratricopeptide repeat-like domain AL552_RS03245 PF13360 PQQ-like domain AL552_RS03250 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AL552_RS03250 PF01926 50S ribosome-binding GTPase AL552_RS03265 PF02601 Exonuclease VII, large subunit AL552_RS03265 PF13742 OB-fold nucleic acid binding domain AL552_RS03270 PF00571 CBS domain AL552_RS03270 PF00478 IMP dehydrogenase / GMP reductase domain AL552_RS03275 PF00958 GMP synthase C terminal domain AL552_RS03275 PF02540 NAD synthase AL552_RS03275 PF00117 Glutamine amidotransferase class-I AL552_RS03280 PF03553 Na+/H+ antiporter family AL552_RS03285 PF00704 Glycosyl hydrolases family 18 AL552_RS03285 PF06483 Chitinase C AL552_RS03290 PF01184 GPR1/FUN34/yaaH family AL552_RS03295 PF01235 Sodium:alanine symporter family AL552_RS03300 PF01266 FAD dependent oxidoreductase AL552_RS03310 PF07969 Amidohydrolase family AL552_RS03315 PF01053 Cys/Met metabolism PLP-dependent enzyme AL552_RS03320 PF00202 Aminotransferase class-III AL552_RS03340 PF00583 Acetyltransferase (GNAT) family AL552_RS03340 PF00795 Carbon-nitrogen hydrolase AL552_RS03345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS03345 PF03466 LysR substrate binding domain AL552_RS03370 PF01668 SmpB protein AL552_RS03375 PF03364 Polyketide cyclase / dehydrase and lipid transport AL552_RS03380 PF03658 RnfH family Ubiquitin AL552_RS03385 PF04355 SmpA / OmlA family AL552_RS03390 PF02463 RecF/RecN/SMC N terminal domain AL552_RS03400 PF01513 ATP-NAD kinase AL552_RS03405 PF01025 GrpE AL552_RS03410 PF00375 Sodium:dicarboxylate symporter family AL552_RS03415 PF00012 Hsp70 protein AL552_RS03420 PF00226 DnaJ domain AL552_RS03420 PF01556 DnaJ C terminal domain AL552_RS03420 PF00684 DnaJ central domain AL552_RS03425 PF00114 Pilin (bacterial filament) AL552_RS03425 PF07963 Prokaryotic N-terminal methylation motif AL552_RS03450 PF03806 AbgT putative transporter family AL552_RS03465 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS03465 PF01464 Transglycosylase SLT domain AL552_RS03470 PF02769 AIR synthase related protein, C-terminal domain AL552_RS03470 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AL552_RS03470 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AL552_RS03485 PF07715 TonB-dependent Receptor Plug Domain AL552_RS03485 PF00593 TonB dependent receptor AL552_RS03500 PF07687 Peptidase dimerisation domain AL552_RS03500 PF01546 Peptidase family M20/M25/M40 AL552_RS03505 PF00860 Permease family AL552_RS03510 PF00156 Phosphoribosyl transferase domain AL552_RS03515 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AL552_RS03520 PF07417 Sigma factor-binding transcriptional regulator Crl AL552_RS03525 PF01472 PUA domain AL552_RS03525 PF00696 Amino acid kinase family AL552_RS03530 PF00171 Aldehyde dehydrogenase family AL552_RS03535 PF03477 ATP cone domain AL552_RS03540 PF01872 RibD C-terminal domain AL552_RS03540 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL552_RS03545 PF00677 Lumazine binding domain AL552_RS03550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL552_RS03550 PF00925 GTP cyclohydrolase II AL552_RS03555 PF00885 6,7-dimethyl-8-ribityllumazine synthase AL552_RS03560 PF01029 NusB family AL552_RS03565 PF00586 AIR synthase related protein, N-terminal domain AL552_RS03565 PF02769 AIR synthase related protein, C-terminal domain AL552_RS03570 PF04608 Phosphatidylglycerophosphatase A AL552_RS03575 PF02780 Transketolase, C-terminal domain AL552_RS03575 PF02779 Transketolase, pyrimidine binding domain AL552_RS03575 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AL552_RS03580 PF00348 Polyprenyl synthetase AL552_RS03585 PF02609 Exonuclease VII small subunit AL552_RS03590 PF01618 MotA/TolQ/ExbB proton channel family AL552_RS03595 PF00691 OmpA family AL552_RS03595 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL552_RS03600 PF02926 THUMP domain AL552_RS03600 PF02568 Thiamine biosynthesis protein (ThiI) AL552_RS03605 PF03466 LysR substrate binding domain AL552_RS03605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS03615 PF04241 Protein of unknown function (DUF423) AL552_RS03620 PF18125 RlmM ferredoxin-like domain AL552_RS03620 PF01728 FtsJ-like methyltransferase AL552_RS03625 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL552_RS03625 PF01367 5'-3' exonuclease, C-terminal SAM fold AL552_RS03630 PF03641 Possible lysine decarboxylase AL552_RS03630 PF11892 Domain of unknown function (DUF3412) AL552_RS03630 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AL552_RS03635 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS03645 PF14489 QueF-like protein AL552_RS03645 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AL552_RS03650 PF07348 Syd protein (SUKH-2) AL552_RS03655 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) AL552_RS03660 PF03180 NLPA lipoprotein AL552_RS03665 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS03670 PF00005 ABC transporter AL552_RS03670 PF09383 NIL domain AL552_RS03680 PF00356 Bacterial regulatory proteins, lacI family AL552_RS03685 PF00367 phosphotransferase system, EIIB AL552_RS03685 PF02378 Phosphotransferase system, EIIC AL552_RS03690 PF00128 Alpha amylase, catalytic domain AL552_RS03690 PF16657 Maltogenic Amylase, C-terminal domain AL552_RS03705 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AL552_RS03705 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AL552_RS03710 PF00464 Serine hydroxymethyltransferase AL552_RS03720 PF04055 Radical SAM superfamily AL552_RS03720 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AL552_RS03725 PF03099 Biotin/lipoate A/B protein ligase family AL552_RS03730 PF04359 Protein of unknown function (DUF493) AL552_RS03735 PF07943 Penicillin-binding protein 5, C-terminal domain AL552_RS03735 PF00768 D-alanyl-D-alanine carboxypeptidase AL552_RS03740 PF03330 Lytic transglycolase AL552_RS03740 PF05036 Sporulation related domain AL552_RS03745 PF01098 Cell cycle protein AL552_RS03750 PF00905 Penicillin binding protein transpeptidase domain AL552_RS03750 PF03717 Penicillin-binding Protein dimerisation domain AL552_RS03755 PF02590 Predicted SPOUT methyltransferase AL552_RS03770 PF04390 Lipopolysaccharide-assembly AL552_RS03775 PF08264 Anticodon-binding domain of tRNA AL552_RS03775 PF00133 tRNA synthetases class I (I, L, M and V) AL552_RS03775 PF13603 Leucyl-tRNA synthetase, Domain 2 AL552_RS03780 PF07295 Zinc-ribbon containing domain AL552_RS03785 PF00795 Carbon-nitrogen hydrolase AL552_RS03790 PF03471 Transporter associated domain AL552_RS03790 PF00571 CBS domain AL552_RS03795 PF02130 Uncharacterized protein family UPF0054 AL552_RS03800 PF02562 PhoH-like protein AL552_RS03805 PF04055 Radical SAM superfamily AL552_RS03805 PF00919 Uncharacterized protein family UPF0004 AL552_RS03805 PF01938 TRAM domain AL552_RS03815 PF01494 FAD binding domain AL552_RS03925 PF06071 Protein of unknown function (DUF933) AL552_RS03925 PF01926 50S ribosome-binding GTPase AL552_RS03930 PF01195 Peptidyl-tRNA hydrolase AL552_RS03935 PF14572 Phosphoribosyl synthetase-associated domain AL552_RS03935 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AL552_RS03940 PF00288 GHMP kinases N terminal domain AL552_RS03940 PF08544 GHMP kinases C terminal AL552_RS03945 PF03550 Outer membrane lipoprotein LolB AL552_RS03950 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AL552_RS03950 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AL552_RS03950 PF01488 Shikimate / quinate 5-dehydrogenase AL552_RS03955 PF00472 RF-1 domain AL552_RS03955 PF03462 PCRF domain AL552_RS03960 PF17827 PrmC N-terminal domain AL552_RS03960 PF13847 Methyltransferase domain AL552_RS03965 PF04247 Invasion gene expression up-regulator, SirB AL552_RS03970 PF13369 Transglutaminase-like superfamily AL552_RS03975 PF00793 DAHP synthetase I family AL552_RS03980 PF00149 Calcineurin-like phosphoesterase AL552_RS03980 PF02872 5'-nucleotidase, C-terminal domain AL552_RS03985 PF04073 Aminoacyl-tRNA editing domain AL552_RS03990 PF00849 RNA pseudouridylate synthase AL552_RS03990 PF01479 S4 domain AL552_RS03995 PF01713 Smr domain AL552_RS04020 PF03173 Putative carbohydrate binding domain AL552_RS04020 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AL552_RS04020 PF00728 Glycosyl hydrolase family 20, catalytic domain AL552_RS04020 PF02838 Glycosyl hydrolase family 20, domain 2 AL552_RS04035 PF00403 Heavy-metal-associated domain AL552_RS04050 PF13609 Gram-negative porin AL552_RS04055 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL552_RS04060 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL552_RS04065 PF01389 OmpA-like transmembrane domain AL552_RS04065 PF00691 OmpA family AL552_RS04110 PF01584 CheW-like domain AL552_RS04110 PF00072 Response regulator receiver domain AL552_RS04115 PF01739 CheR methyltransferase, SAM binding domain AL552_RS04115 PF03705 CheR methyltransferase, all-alpha domain AL552_RS04120 PF00460 Flagella basal body rod protein AL552_RS04125 PF00460 Flagella basal body rod protein AL552_RS04125 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL552_RS04130 PF13860 FlgD Ig-like domain AL552_RS04130 PF03963 Flagellar hook capping protein - N-terminal region AL552_RS04130 PF13861 FlgD Tudor-like domain AL552_RS04135 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL552_RS04135 PF00460 Flagella basal body rod protein AL552_RS04135 PF07559 Flagellar basal body protein FlaE AL552_RS04140 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL552_RS04140 PF00460 Flagella basal body rod protein AL552_RS04145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL552_RS04145 PF00460 Flagella basal body rod protein AL552_RS04150 PF02107 Flagellar L-ring protein AL552_RS04155 PF02119 Flagellar P-ring protein AL552_RS04160 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL552_RS04160 PF10135 Rod binding protein AL552_RS04170 PF00669 Bacterial flagellin N-terminal helical region AL552_RS04175 PF00700 Bacterial flagellin C-terminal helical region AL552_RS04175 PF07196 Flagellin hook IN motif AL552_RS04175 PF00669 Bacterial flagellin N-terminal helical region AL552_RS04190 PF00669 Bacterial flagellin N-terminal helical region AL552_RS04190 PF00700 Bacterial flagellin C-terminal helical region AL552_RS04190 PF07196 Flagellin hook IN motif AL552_RS04195 PF00669 Bacterial flagellin N-terminal helical region AL552_RS04195 PF00700 Bacterial flagellin C-terminal helical region AL552_RS04195 PF07196 Flagellin hook IN motif AL552_RS04200 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AL552_RS04205 PF02896 PEP-utilising enzyme, TIM barrel domain AL552_RS04205 PF00391 PEP-utilising enzyme, mobile domain AL552_RS04205 PF05524 PEP-utilising enzyme, N-terminal AL552_RS04210 PF00381 PTS HPr component phosphorylation site AL552_RS04220 PF00291 Pyridoxal-phosphate dependent enzyme AL552_RS04230 PF04354 ZipA, C-terminal FtsZ-binding domain AL552_RS04240 PF03573 outer membrane porin, OprD family AL552_RS04260 PF01145 SPFH domain / Band 7 family AL552_RS04260 PF16200 C-terminal region of band_7 AL552_RS04265 PF00085 Thioredoxin AL552_RS04275 PF00106 short chain dehydrogenase AL552_RS04280 PF01370 NAD dependent epimerase/dehydratase family AL552_RS04280 PF08338 Domain of unknown function (DUF1731) AL552_RS04285 PF07556 Protein of unknown function (DUF1538) AL552_RS04290 PF07556 Protein of unknown function (DUF1538) AL552_RS04310 PF12850 Calcineurin-like phosphoesterase superfamily domain AL552_RS04325 PF17323 Trans-membrane regulatory protein ToxS AL552_RS04330 PF00486 Transcriptional regulatory protein, C terminal AL552_RS04335 PF00183 Hsp90 protein AL552_RS04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS04340 PF05191 Adenylate kinase, active site lid AL552_RS04345 PF00762 Ferrochelatase AL552_RS04350 PF00854 POT family AL552_RS04355 PF02357 Transcription termination factor nusG AL552_RS04360 PF00733 Asparagine synthase AL552_RS04360 PF13537 Glutamine amidotransferase domain AL552_RS04365 PF02254 TrkA-N domain AL552_RS04365 PF00999 Sodium/hydrogen exchanger family AL552_RS04370 PF01047 MarR family AL552_RS04370 PF00480 ROK family AL552_RS04375 PF01979 Amidohydrolase family AL552_RS04390 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AL552_RS04390 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL552_RS04395 PF01475 Ferric uptake regulator family AL552_RS04405 PF00258 Flavodoxin AL552_RS04415 PF12697 Alpha/beta hydrolase family AL552_RS04420 PF17206 SeqA protein N-terminal domain AL552_RS04420 PF03925 SeqA protein C-terminal domain AL552_RS04425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL552_RS04425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL552_RS04425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL552_RS04425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL552_RS04435 PF01784 NIF3 (NGG1p interacting factor 3) AL552_RS04440 PF00285 Citrate synthase, C-terminal domain AL552_RS04445 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL552_RS04450 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AL552_RS04455 PF00890 FAD binding domain AL552_RS04455 PF02910 Fumarate reductase flavoprotein C-term AL552_RS04460 PF13085 2Fe-2S iron-sulfur cluster binding domain AL552_RS04465 PF16078 2-oxoglutarate dehydrogenase N-terminus AL552_RS04465 PF00676 Dehydrogenase E1 component AL552_RS04465 PF16870 2-oxoglutarate dehydrogenase C-terminal AL552_RS04465 PF02779 Transketolase, pyrimidine binding domain AL552_RS04470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL552_RS04470 PF00364 Biotin-requiring enzyme AL552_RS04470 PF02817 e3 binding domain AL552_RS04475 PF08442 ATP-grasp domain AL552_RS04475 PF00549 CoA-ligase AL552_RS04480 PF02629 CoA binding domain AL552_RS04480 PF00549 CoA-ligase AL552_RS04485 PF00950 ABC 3 transport family AL552_RS04495 PF01297 Zinc-uptake complex component A periplasmic AL552_RS04500 PF12833 Helix-turn-helix domain AL552_RS04500 PF02311 AraC-like ligand binding domain AL552_RS04510 PF04023 FeoA domain AL552_RS04515 PF07670 Nucleoside recognition AL552_RS04515 PF02421 Ferrous iron transport protein B AL552_RS04515 PF17910 FeoB cytosolic helical domain AL552_RS04515 PF07664 Ferrous iron transport protein B C terminus AL552_RS04530 PF03485 Arginyl tRNA synthetase N terminal domain AL552_RS04530 PF05746 DALR anticodon binding domain AL552_RS04530 PF00750 tRNA synthetases class I (R) AL552_RS04540 PF06185 YecM protein AL552_RS04545 PF00551 Formyl transferase AL552_RS04545 PF01842 ACT domain AL552_RS04555 PF00814 Glycoprotease family AL552_RS04570 PF00561 alpha/beta hydrolase fold AL552_RS04580 PF00570 HRDC domain AL552_RS04580 PF01612 3'-5' exonuclease AL552_RS04585 PF03776 Septum formation topological specificity factor MinE AL552_RS04590 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL552_RS04595 PF03775 Septum formation inhibitor MinC, C-terminal domain AL552_RS04595 PF05209 Septum formation inhibitor MinC, N-terminal domain AL552_RS04600 PF05166 YcgL domain AL552_RS04605 PF13406 Transglycosylase SLT domain AL552_RS04610 PF03466 LysR substrate binding domain AL552_RS04610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS04615 PF07662 Na+ dependent nucleoside transporter C-terminus AL552_RS04615 PF07670 Nucleoside recognition AL552_RS04615 PF01773 Na+ dependent nucleoside transporter N-terminus AL552_RS04620 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AL552_RS04620 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AL552_RS04630 PF01209 ubiE/COQ5 methyltransferase family AL552_RS04635 PF02801 Beta-ketoacyl synthase, C-terminal domain AL552_RS04635 PF00109 Beta-ketoacyl synthase, N-terminal domain AL552_RS04645 PF07977 FabA-like domain AL552_RS04650 PF02801 Beta-ketoacyl synthase, C-terminal domain AL552_RS04650 PF00109 Beta-ketoacyl synthase, N-terminal domain AL552_RS04675 PF00221 Aromatic amino acid lyase AL552_RS04680 PF00535 Glycosyl transferase family 2 AL552_RS04685 PF07977 FabA-like domain AL552_RS04700 PF00550 Phosphopantetheine attachment site AL552_RS04705 PF00550 Phosphopantetheine attachment site AL552_RS04730 PF04820 Tryptophan halogenase AL552_RS04740 PF00571 CBS domain AL552_RS04740 PF03471 Transporter associated domain AL552_RS04740 PF01595 Cyclin M transmembrane N-terminal domain AL552_RS04745 PF00270 DEAD/DEAH box helicase AL552_RS04745 PF00271 Helicase conserved C-terminal domain AL552_RS04750 PF02254 TrkA-N domain AL552_RS04750 PF02080 TrkA-C domain AL552_RS04755 PF02386 Cation transport protein AL552_RS04770 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AL552_RS04775 PF03480 Bacterial extracellular solute-binding protein, family 7 AL552_RS04780 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL552_RS04785 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL552_RS04795 PF00158 Sigma-54 interaction domain AL552_RS04795 PF00072 Response regulator receiver domain AL552_RS04795 PF02954 Bacterial regulatory protein, Fis family AL552_RS04800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS04800 PF02743 Cache domain AL552_RS04800 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS04810 PF05698 Bacterial trigger factor protein (TF) C-terminus AL552_RS04810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL552_RS04810 PF05697 Bacterial trigger factor protein (TF) AL552_RS04815 PF00574 Clp protease AL552_RS04820 PF10431 C-terminal, D2-small domain, of ClpB protein AL552_RS04820 PF06689 ClpX C4-type zinc finger AL552_RS04820 PF07724 AAA domain (Cdc48 subfamily) AL552_RS04825 PF02190 ATP-dependent protease La (LON) substrate-binding domain AL552_RS04825 PF05362 Lon protease (S16) C-terminal proteolytic domain AL552_RS04825 PF00004 ATPase family associated with various cellular activities (AAA) AL552_RS04830 PF00216 Bacterial DNA-binding protein AL552_RS04835 PF13145 PPIC-type PPIASE domain AL552_RS04855 PF01966 HD domain AL552_RS04855 PF13286 Phosphohydrolase-associated domain AL552_RS04865 PF00155 Aminotransferase class I and II AL552_RS04870 PF00425 chorismate binding enzyme AL552_RS04875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL552_RS04875 PF16582 Middle domain of thiamine pyrophosphate AL552_RS04875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL552_RS04880 PF12697 Alpha/beta hydrolase family AL552_RS04885 PF00378 Enoyl-CoA hydratase/isomerase AL552_RS04890 PF13378 Enolase C-terminal domain-like AL552_RS04895 PF00501 AMP-binding enzyme AL552_RS04895 PF13193 AMP-binding enzyme C-terminal domain AL552_RS04905 PF03601 Conserved hypothetical protein 698 AL552_RS04910 PF07690 Major Facilitator Superfamily AL552_RS04960 PF00529 HlyD membrane-fusion protein of T1SS AL552_RS04960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS04965 PF00873 AcrB/AcrD/AcrF family AL552_RS04985 PF00291 Pyridoxal-phosphate dependent enzyme AL552_RS04990 PF01037 Lrp/AsnC ligand binding domain AL552_RS04990 PF13404 AsnC-type helix-turn-helix domain AL552_RS05005 PF09619 Type III secretion system lipoprotein chaperone (YscW) AL552_RS05010 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL552_RS05020 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS05020 PF00072 Response regulator receiver domain AL552_RS05030 PF00588 SpoU rRNA Methylase family AL552_RS05030 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL552_RS05035 PF00478 IMP dehydrogenase / GMP reductase domain AL552_RS05035 PF00571 CBS domain AL552_RS05040 PF00403 Heavy-metal-associated domain AL552_RS05045 PF01048 Phosphorylase superfamily AL552_RS05055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS05055 PF00672 HAMP domain AL552_RS05065 PF01230 HIT domain AL552_RS05080 PF13036 Peptidoglycan-synthase activator LpoB AL552_RS05080 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AL552_RS05085 PF01636 Phosphotransferase enzyme family AL552_RS05090 PF05728 Uncharacterised protein family (UPF0227) AL552_RS05095 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS05110 PF02559 CarD-like/TRCF domain AL552_RS05110 PF00271 Helicase conserved C-terminal domain AL552_RS05110 PF03461 TRCF domain AL552_RS05110 PF17757 UvrB interaction domain AL552_RS05110 PF00270 DEAD/DEAH box helicase AL552_RS05120 PF12704 MacB-like periplasmic core domain AL552_RS05120 PF02687 FtsX-like permease family AL552_RS05125 PF00005 ABC transporter AL552_RS05130 PF02687 FtsX-like permease family AL552_RS05130 PF12704 MacB-like periplasmic core domain AL552_RS05140 PF13567 Domain of unknown function (DUF4131) AL552_RS05140 PF03772 Competence protein AL552_RS05140 PF00753 Metallo-beta-lactamase superfamily AL552_RS05145 PF00664 ABC transporter transmembrane region AL552_RS05145 PF00005 ABC transporter AL552_RS05150 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AL552_RS05155 PF03966 Trm112p-like protein AL552_RS05160 PF02348 Cytidylyltransferase AL552_RS05165 PF04293 SpoVR like protein AL552_RS05170 PF04285 Protein of unknown function (DUF444) AL552_RS05175 PF06798 PrkA serine protein kinase C-terminal domain AL552_RS05175 PF08298 PrkA AAA domain AL552_RS05185 PF03887 YfbU domain AL552_RS05195 PF04055 Radical SAM superfamily AL552_RS05205 PF01228 Glycine radical AL552_RS05205 PF02901 Pyruvate formate lyase-like AL552_RS05225 PF00005 ABC transporter AL552_RS05230 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS05235 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS05250 PF03372 Endonuclease/Exonuclease/phosphatase family AL552_RS05255 PF10689 Protein of unknown function (DUF2496) AL552_RS05260 PF07445 Primosomal replication protein priC AL552_RS05265 PF01925 Sulfite exporter TauE/SafE AL552_RS05280 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL552_RS05285 PF00849 RNA pseudouridylate synthase AL552_RS05290 PF03971 Monomeric isocitrate dehydrogenase AL552_RS05295 PF00313 'Cold-shock' DNA-binding domain AL552_RS05300 PF02617 ATP-dependent Clp protease adaptor protein ClpS AL552_RS05305 PF00004 ATPase family associated with various cellular activities (AAA) AL552_RS05305 PF07724 AAA domain (Cdc48 subfamily) AL552_RS05305 PF17871 AAA lid domain AL552_RS05305 PF10431 C-terminal, D2-small domain, of ClpB protein AL552_RS05305 PF02861 Clp amino terminal domain, pathogenicity island component AL552_RS05310 PF01176 Translation initiation factor 1A / IF-1 AL552_RS05315 PF04377 Arginine-tRNA-protein transferase, C terminus AL552_RS05315 PF04376 Arginine-tRNA-protein transferase, N terminus AL552_RS05330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL552_RS05335 PF10692 Protein of unknown function (DUF2498) AL552_RS05340 PF01396 Topoisomerase DNA binding C4 zinc finger AL552_RS05340 PF01131 DNA topoisomerase AL552_RS05340 PF01751 Toprim domain AL552_RS05340 PF08272 Topoisomerase I zinc-ribbon-like AL552_RS05345 PF00483 Nucleotidyl transferase AL552_RS05350 PF00534 Glycosyl transferases group 1 AL552_RS05350 PF08323 Starch synthase catalytic domain AL552_RS05370 PF04994 TfoX C-terminal domain AL552_RS05370 PF04993 TfoX N-terminal domain AL552_RS05375 PF00356 Bacterial regulatory proteins, lacI family AL552_RS05380 PF02613 Nitrate reductase delta subunit AL552_RS05385 PF00072 Response regulator receiver domain AL552_RS05385 PF00486 Transcriptional regulatory protein, C terminal AL552_RS05390 PF02698 DUF218 domain AL552_RS05395 PF13847 Methyltransferase domain AL552_RS05400 PF03882 MukF winged-helix domain AL552_RS05400 PF17193 MukF C-terminal domain AL552_RS05400 PF17192 MukF middle domain AL552_RS05405 PF04288 MukE-like family AL552_RS05410 PF04310 MukB N-terminal AL552_RS05410 PF16330 MukB hinge domain AL552_RS05430 PF18030 RimK PreATP-grasp domain AL552_RS05430 PF08443 RimK-like ATP-grasp domain AL552_RS05440 PF08003 Protein of unknown function (DUF1698) AL552_RS05445 PF13649 Methyltransferase domain AL552_RS05450 PF01904 Protein of unknown function DUF72 AL552_RS05455 PF00152 tRNA synthetases class II (D, K and N) AL552_RS05455 PF02938 GAD domain AL552_RS05455 PF01336 OB-fold nucleic acid binding domain AL552_RS05460 PF01709 Transcriptional regulator AL552_RS05465 PF02075 Crossover junction endodeoxyribonuclease RuvC AL552_RS05470 PF01330 RuvA N terminal domain AL552_RS05470 PF07499 RuvA, C-terminal domain AL552_RS05475 PF05491 RuvB C-terminal winged helix domain AL552_RS05475 PF17864 RuvB AAA lid domain AL552_RS05475 PF05496 Holliday junction DNA helicase RuvB P-loop domain AL552_RS05480 PF01654 Cytochrome bd terminal oxidase subunit I AL552_RS05485 PF02322 Cytochrome bd terminal oxidase subunit II AL552_RS05490 PF08173 Membrane bound YbgT-like protein AL552_RS05500 PF03061 Thioesterase superfamily AL552_RS05505 PF01618 MotA/TolQ/ExbB proton channel family AL552_RS05510 PF02472 Biopolymer transport protein ExbD/TolR AL552_RS05520 PF04052 TolB amino-terminal domain AL552_RS05520 PF07676 WD40-like Beta Propeller Repeat AL552_RS05525 PF00691 OmpA family AL552_RS05530 PF13174 Tetratricopeptide repeat AL552_RS05530 PF16331 TolA binding protein trimerisation AL552_RS05535 PF02445 Quinolinate synthetase A protein AL552_RS05545 PF03994 Domain of Unknown Function (DUF350) AL552_RS05565 PF00072 Response regulator receiver domain AL552_RS05565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS05565 PF09308 LuxQ, periplasmic AL552_RS05565 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS05570 PF06610 L-alanine exporter AL552_RS05580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS05580 PF00672 HAMP domain AL552_RS05580 PF02743 Cache domain AL552_RS05585 PF00529 HlyD membrane-fusion protein of T1SS AL552_RS05585 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS05590 PF00873 AcrB/AcrD/AcrF family AL552_RS05605 PF00579 tRNA synthetases class I (W and Y) AL552_RS05615 PF03372 Endonuclease/Exonuclease/phosphatase family AL552_RS05625 PF00672 HAMP domain AL552_RS05625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS05625 PF17200 Single Cache domain 2 AL552_RS05630 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AL552_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS05640 PF03466 LysR substrate binding domain AL552_RS05650 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL552_RS05650 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL552_RS05655 PF01037 Lrp/AsnC ligand binding domain AL552_RS05660 PF09397 Ftsk gamma domain AL552_RS05660 PF17854 FtsK alpha domain AL552_RS05660 PF01580 FtsK/SpoIIIE family AL552_RS05660 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AL552_RS05665 PF03548 Outer membrane lipoprotein carrier protein LolA AL552_RS05670 PF12002 MgsA AAA+ ATPase C terminal AL552_RS05670 PF16193 AAA C-terminal domain AL552_RS05670 PF00004 ATPase family associated with various cellular activities (AAA) AL552_RS05675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL552_RS05675 PF02403 Seryl-tRNA synthetase N-terminal domain AL552_RS05690 PF00202 Aminotransferase class-III AL552_RS05695 PF06968 Biotin and Thiamin Synthesis associated domain AL552_RS05695 PF04055 Radical SAM superfamily AL552_RS05700 PF00155 Aminotransferase class I and II AL552_RS05705 PF12697 Alpha/beta hydrolase family AL552_RS05705 PF08241 Methyltransferase domain AL552_RS05720 PF01435 Peptidase family M48 AL552_RS05730 PF00106 short chain dehydrogenase AL552_RS05755 PF16036 Chalcone isomerase-like AL552_RS05765 PF08328 Adenylosuccinate lyase C-terminal AL552_RS05765 PF00206 Lyase AL552_RS05770 PF04356 Protein of unknown function (DUF489) AL552_RS05785 PF00294 pfkB family carbohydrate kinase AL552_RS05790 PF00816 H-NS histone family AL552_RS05795 PF03553 Na+/H+ antiporter family AL552_RS05800 PF02954 Bacterial regulatory protein, Fis family AL552_RS05800 PF00158 Sigma-54 interaction domain AL552_RS05800 PF00072 Response regulator receiver domain AL552_RS05805 PF08029 HisG, C-terminal domain AL552_RS05805 PF01634 ATP phosphoribosyltransferase AL552_RS05810 PF00815 Histidinol dehydrogenase AL552_RS05815 PF00155 Aminotransferase class I and II AL552_RS05820 PF00475 Imidazoleglycerol-phosphate dehydratase AL552_RS05820 PF08645 Polynucleotide kinase 3 phosphatase AL552_RS05825 PF00117 Glutamine amidotransferase class-I AL552_RS05830 PF00977 Histidine biosynthesis protein AL552_RS05835 PF00977 Histidine biosynthesis protein AL552_RS05840 PF01502 Phosphoribosyl-AMP cyclohydrolase AL552_RS05840 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AL552_RS05845 PF02810 SEC-C motif AL552_RS05850 PF00563 EAL domain AL552_RS05850 PF08668 HDOD domain AL552_RS05855 PF00149 Calcineurin-like phosphoesterase AL552_RS05860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL552_RS05865 PF09190 DALR domain AL552_RS05865 PF01406 tRNA synthetases class I (C) catalytic domain AL552_RS05870 PF00265 Thymidine kinase AL552_RS05875 PF02698 DUF218 domain AL552_RS05900 PF01226 Formate/nitrite transporter AL552_RS05910 PF03649 Uncharacterised protein family (UPF0014) AL552_RS05915 PF06796 Periplasmic nitrate reductase protein NapE AL552_RS05920 PF03264 NapC/NirT cytochrome c family, N-terminal region AL552_RS05925 PF01568 Molydopterin dinucleotide binding domain AL552_RS05925 PF18364 Molybdopterin oxidoreductase N-terminal domain AL552_RS05925 PF00384 Molybdopterin oxidoreductase AL552_RS05930 PF16875 Glycosyl hydrolase family 36 N-terminal domain AL552_RS05930 PF16874 Glycosyl hydrolase family 36 C-terminal domain AL552_RS05940 PF02833 DHHA2 domain AL552_RS05940 PF01368 DHH family AL552_RS05950 PF00005 ABC transporter AL552_RS05955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS05955 PF00005 ABC transporter AL552_RS05960 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS05960 PF12911 N-terminal TM domain of oligopeptide transport permease C AL552_RS05965 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS05970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL552_RS05975 PF00158 Sigma-54 interaction domain AL552_RS05975 PF02954 Bacterial regulatory protein, Fis family AL552_RS05980 PF04012 PspA/IM30 family AL552_RS05985 PF06667 Phage shock protein B AL552_RS05990 PF04024 PspC domain AL552_RS06000 PF13533 Biotin-lipoyl like AL552_RS06005 PF00873 AcrB/AcrD/AcrF family AL552_RS06010 PF03352 Methyladenine glycosylase AL552_RS06015 PF03280 Proteobacterial lipase chaperone protein AL552_RS06020 PF00561 alpha/beta hydrolase fold AL552_RS06025 PF01053 Cys/Met metabolism PLP-dependent enzyme AL552_RS06030 PF13091 PLD-like domain AL552_RS06030 PF13396 Phospholipase_D-nuclease N-terminal AL552_RS06035 PF00209 Sodium:neurotransmitter symporter family AL552_RS06040 PF00849 RNA pseudouridylate synthase AL552_RS06050 PF00111 2Fe-2S iron-sulfur cluster binding domain AL552_RS06050 PF00970 Oxidoreductase FAD-binding domain AL552_RS06050 PF00175 Oxidoreductase NAD-binding domain AL552_RS06055 PF03063 Prismane/CO dehydrogenase family AL552_RS06060 PF00158 Sigma-54 interaction domain AL552_RS06060 PF01590 GAF domain AL552_RS06075 PF01066 CDP-alcohol phosphatidyltransferase AL552_RS06080 PF00005 ABC transporter AL552_RS06085 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS06090 PF13416 Bacterial extracellular solute-binding protein AL552_RS06100 PF06945 Protein of unknown function (DUF1289) AL552_RS06110 PF02872 5'-nucleotidase, C-terminal domain AL552_RS06110 PF00149 Calcineurin-like phosphoesterase AL552_RS06115 PF00583 Acetyltransferase (GNAT) family AL552_RS06120 PF01386 Ribosomal L25p family AL552_RS06130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS06135 PF00486 Transcriptional regulatory protein, C terminal AL552_RS06135 PF00072 Response regulator receiver domain AL552_RS06145 PF04851 Type III restriction enzyme, res subunit AL552_RS06145 PF00271 Helicase conserved C-terminal domain AL552_RS06150 PF01479 S4 domain AL552_RS06150 PF00849 RNA pseudouridylate synthase AL552_RS06160 PF07690 Major Facilitator Superfamily AL552_RS06175 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AL552_RS06190 PF03264 NapC/NirT cytochrome c family, N-terminal region AL552_RS06195 PF11066 Protein of unknown function (DUF2867) AL552_RS06195 PF13460 NAD(P)H-binding AL552_RS06200 PF01554 MatE AL552_RS06205 PF00005 ABC transporter AL552_RS06220 PF06965 Na+/H+ antiporter 1 AL552_RS06225 PF16295 Tetracyclin repressor-like, C-terminal domain AL552_RS06225 PF00440 Bacterial regulatory proteins, tetR family AL552_RS06230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL552_RS06230 PF09317 Domain of unknown function (DUF1974) AL552_RS06230 PF02770 Acyl-CoA dehydrogenase, middle domain AL552_RS06230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL552_RS06235 PF07055 Enoyl reductase FAD binding domain AL552_RS06235 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL552_RS06235 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL552_RS06240 PF06826 Predicted Permease Membrane Region AL552_RS06240 PF02080 TrkA-C domain AL552_RS06245 PF00462 Glutaredoxin AL552_RS06260 PF00465 Iron-containing alcohol dehydrogenase AL552_RS06265 PF01380 SIS domain AL552_RS06265 PF01418 Helix-turn-helix domain, rpiR family AL552_RS06270 PF00282 Pyridoxal-dependent decarboxylase conserved domain AL552_RS06280 PF03956 Lysine exporter LysO AL552_RS06295 PF04993 TfoX N-terminal domain AL552_RS06295 PF04994 TfoX C-terminal domain AL552_RS06310 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS06310 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS06320 PF00266 Aminotransferase class-V AL552_RS06325 PF00291 Pyridoxal-phosphate dependent enzyme AL552_RS06330 PF00005 ABC transporter AL552_RS06330 PF00664 ABC transporter transmembrane region AL552_RS06335 PF00005 ABC transporter AL552_RS06335 PF00664 ABC transporter transmembrane region AL552_RS06340 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS06350 PF00266 Aminotransferase class-V AL552_RS06365 PF00939 Sodium:sulfate symporter transmembrane region AL552_RS06370 PF02698 DUF218 domain AL552_RS06375 PF00390 Malic enzyme, N-terminal domain AL552_RS06375 PF03949 Malic enzyme, NAD binding domain AL552_RS06390 PF16655 PhoD-like phosphatase, N-terminal domain AL552_RS06390 PF09423 PhoD-like phosphatase AL552_RS06395 PF01259 SAICAR synthetase AL552_RS06415 PF00691 OmpA family AL552_RS06415 PF05736 OprF membrane domain AL552_RS06430 PF02913 FAD linked oxidases, C-terminal domain AL552_RS06430 PF13183 4Fe-4S dicluster domain AL552_RS06430 PF01565 FAD binding domain AL552_RS06435 PF04191 Phospholipid methyltransferase AL552_RS06445 PF00221 Aromatic amino acid lyase AL552_RS06450 PF01175 Urocanase Rossmann-like domain AL552_RS06450 PF17391 Urocanase N-terminal domain AL552_RS06450 PF17392 Urocanase C-terminal domain AL552_RS06455 PF00491 Arginase family AL552_RS06460 PF01979 Amidohydrolase family AL552_RS06465 PF00392 Bacterial regulatory proteins, gntR family AL552_RS06465 PF07702 UTRA domain AL552_RS06480 PF02824 TGS domain AL552_RS06480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL552_RS06480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL552_RS06480 PF03129 Anticodon binding domain AL552_RS06490 PF01632 Ribosomal protein L35 AL552_RS06495 PF00453 Ribosomal protein L20 AL552_RS06500 PF01906 Putative heavy-metal-binding AL552_RS06530 PF01409 tRNA synthetases class II core domain (F) AL552_RS06530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AL552_RS06535 PF03483 B3/4 domain AL552_RS06535 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AL552_RS06535 PF03484 tRNA synthetase B5 domain AL552_RS06535 PF03147 Ferredoxin-fold anticodon binding domain AL552_RS06535 PF01588 Putative tRNA binding domain AL552_RS06545 PF00216 Bacterial DNA-binding protein AL552_RS06555 PF05724 Thiopurine S-methyltransferase (TPMT) AL552_RS06560 PF02222 ATP-grasp domain AL552_RS06565 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL552_RS06565 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AL552_RS06570 PF04172 LrgB-like family AL552_RS06575 PF03788 LrgA family AL552_RS06580 PF08411 Exonuclease C-terminal AL552_RS06580 PF00929 Exonuclease AL552_RS06585 PF00375 Sodium:dicarboxylate symporter family AL552_RS06590 PF13460 NAD(P)H-binding AL552_RS06595 PF02277 Phosphoribosyltransferase AL552_RS06600 PF02654 Cobalamin-5-phosphate synthase AL552_RS06605 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AL552_RS06620 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL552_RS06625 PF01032 FecCD transport family AL552_RS06630 PF00005 ABC transporter AL552_RS06650 PF03466 LysR substrate binding domain AL552_RS06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS06660 PF01863 Protein of unknown function DUF45 AL552_RS06665 PF05971 RNA methyltransferase AL552_RS06685 PF00392 Bacterial regulatory proteins, gntR family AL552_RS06690 PF00171 Aldehyde dehydrogenase family AL552_RS06695 PF05544 Proline racemase AL552_RS06700 PF01266 FAD dependent oxidoreductase AL552_RS06700 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AL552_RS06710 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL552_RS06715 PF00701 Dihydrodipicolinate synthetase family AL552_RS06720 PF08402 TOBE domain AL552_RS06720 PF00005 ABC transporter AL552_RS06730 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS06740 PF08453 Peptidase family M9 N-terminal AL552_RS06740 PF01752 Collagenase AL552_RS06750 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS06750 PF00005 ABC transporter AL552_RS06755 PF00005 ABC transporter AL552_RS06755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS06760 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS06760 PF12911 N-terminal TM domain of oligopeptide transport permease C AL552_RS06765 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS06775 PF01546 Peptidase family M20/M25/M40 AL552_RS06775 PF07687 Peptidase dimerisation domain AL552_RS06780 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL552_RS06785 PF04209 homogentisate 1,2-dioxygenase AL552_RS06795 PF14497 Glutathione S-transferase, C-terminal domain AL552_RS06795 PF02798 Glutathione S-transferase, N-terminal domain AL552_RS06830 PF12792 CSS motif domain associated with EAL AL552_RS06830 PF00563 EAL domain AL552_RS06840 PF01047 MarR family AL552_RS06845 PF04237 YjbR AL552_RS06860 PF12464 Maltose acetyltransferase AL552_RS06860 PF00132 Bacterial transferase hexapeptide (six repeats) AL552_RS06875 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS06875 PF00672 HAMP domain AL552_RS06875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS06875 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL552_RS06875 PF01627 Hpt domain AL552_RS06875 PF00072 Response regulator receiver domain AL552_RS06880 PF03707 Bacterial signalling protein N terminal repeat AL552_RS06880 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS06880 PF00563 EAL domain AL552_RS06895 PF04204 Homoserine O-succinyltransferase AL552_RS06905 PF00893 Small Multidrug Resistance protein AL552_RS06910 PF13520 Amino acid permease AL552_RS06915 PF03279 Bacterial lipid A biosynthesis acyltransferase AL552_RS06920 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AL552_RS06925 PF01810 LysE type translocator AL552_RS06935 PF01235 Sodium:alanine symporter family AL552_RS06965 PF00884 Sulfatase AL552_RS06970 PF08521 Two-component sensor kinase N-terminal AL552_RS06970 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS06975 PF00072 Response regulator receiver domain AL552_RS06975 PF00486 Transcriptional regulatory protein, C terminal AL552_RS06995 PF00501 AMP-binding enzyme AL552_RS07005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL552_RS07010 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS07015 PF00571 CBS domain AL552_RS07015 PF00005 ABC transporter AL552_RS07030 PF02028 BCCT, betaine/carnitine/choline family transporter AL552_RS07035 PF00583 Acetyltransferase (GNAT) family AL552_RS07040 PF00202 Aminotransferase class-III AL552_RS07045 PF06339 Ectoine synthase AL552_RS07050 PF00696 Amino acid kinase family AL552_RS07050 PF13840 ACT domain AL552_RS07070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS07085 PF17203 Single cache domain 3 AL552_RS07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS07085 PF00989 PAS fold AL552_RS07085 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AL552_RS07090 PF00072 Response regulator receiver domain AL552_RS07090 PF12431 Transcriptional regulator AL552_RS07095 PF00593 TonB dependent receptor AL552_RS07095 PF07715 TonB-dependent Receptor Plug Domain AL552_RS07100 PF12833 Helix-turn-helix domain AL552_RS07105 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AL552_RS07105 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AL552_RS07110 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL552_RS07115 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL552_RS07115 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AL552_RS07140 PF00158 Sigma-54 interaction domain AL552_RS07140 PF02954 Bacterial regulatory protein, Fis family AL552_RS07140 PF01590 GAF domain AL552_RS07145 PF00171 Aldehyde dehydrogenase family AL552_RS07165 PF12833 Helix-turn-helix domain AL552_RS07180 PF03958 Bacterial type II/III secretion system short domain AL552_RS07180 PF00263 Bacterial type II and III secretion system protein AL552_RS07185 PF16693 Inner membrane component of T3SS, periplasmic domain AL552_RS07185 PF16697 Inner membrane component of T3SS, cytoplasmic domain AL552_RS07195 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF AL552_RS07200 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) AL552_RS07210 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI AL552_RS07215 PF01514 Secretory protein of YscJ/FliF family AL552_RS07225 PF02108 Flagellar assembly protein FliH AL552_RS07235 PF02661 Fic/DOC family AL552_RS07285 PF08360 QacR-like protein, C-terminal region AL552_RS07285 PF00440 Bacterial regulatory proteins, tetR family AL552_RS07290 PF01312 FlhB HrpN YscU SpaS Family AL552_RS07295 PF01311 Bacterial export proteins, family 1 AL552_RS07300 PF01313 Bacterial export proteins, family 3 AL552_RS07305 PF00813 FliP family AL552_RS07325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL552_RS07325 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL552_RS07325 PF18269 T3SS EscN ATPase C-terminal domain AL552_RS07335 PF09059 TyeA AL552_RS07355 PF00771 FHIPEP family AL552_RS07360 PF09621 Type III secretion system regulator (LcrR) AL552_RS07370 PF04792 V antigen (LcrV) protein AL552_RS07375 PF07720 Tetratricopeptide repeat AL552_RS07385 PF05844 YopD protein AL552_RS07395 PF16868 NMT1-like family AL552_RS07400 PF01925 Sulfite exporter TauE/SafE AL552_RS07410 PF01970 Tripartite tricarboxylate transporter TctA family AL552_RS07440 PF00285 Citrate synthase, C-terminal domain AL552_RS07445 PF00330 Aconitase family (aconitate hydratase) AL552_RS07445 PF00694 Aconitase C-terminal domain AL552_RS07450 PF04303 PrpF protein AL552_RS07455 PF16177 Acetyl-coenzyme A synthetase N-terminus AL552_RS07455 PF00501 AMP-binding enzyme AL552_RS07455 PF13193 AMP-binding enzyme C-terminal domain AL552_RS07465 PF00089 Trypsin AL552_RS07480 PF04055 Radical SAM superfamily AL552_RS07485 PF06508 Queuosine biosynthesis protein QueC AL552_RS07490 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS07490 PF07694 5TMR of 5TMR-LYT AL552_RS07500 PF00691 OmpA family AL552_RS07500 PF05736 OprF membrane domain AL552_RS07525 PF05736 OprF membrane domain AL552_RS07525 PF00691 OmpA family AL552_RS07540 PF17785 PUA-like domain AL552_RS07540 PF10672 S-adenosylmethionine-dependent methyltransferase AL552_RS07545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS07545 PF00672 HAMP domain AL552_RS07545 PF02743 Cache domain AL552_RS07550 PF00708 Acylphosphatase AL552_RS07555 PF04358 DsrC like protein AL552_RS07570 PF01027 Inhibitor of apoptosis-promoting Bax1 AL552_RS07575 PF00005 ABC transporter AL552_RS07580 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS07585 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS07590 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS07600 PF10414 Sirohaem synthase dimerisation region AL552_RS07600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL552_RS07600 PF14824 Sirohaem biosynthesis protein central AL552_RS07605 PF04461 Protein of unknown function (DUF520) AL552_RS07610 PF00793 DAHP synthetase I family AL552_RS07630 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AL552_RS07630 PF01189 16S rRNA methyltransferase RsmB/F AL552_RS07630 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AL552_RS07635 PF02470 MlaD protein AL552_RS07640 PF04403 Paraquat-inducible protein A AL552_RS07645 PF00005 ABC transporter AL552_RS07645 PF00664 ABC transporter transmembrane region AL552_RS07650 PF13185 GAF domain AL552_RS07655 PF17516 ProQ C-terminal domain AL552_RS07655 PF04352 ProQ/FINO family AL552_RS07660 PF17804 Tail specific protease N-terminal domain AL552_RS07660 PF03572 Peptidase family S41 AL552_RS07660 PF00595 PDZ domain AL552_RS07660 PF11818 C-terminal domain of tail specific protease (DUF3340) AL552_RS07670 PF01433 Peptidase family M1 domain AL552_RS07670 PF11940 Domain of unknown function (DUF3458) Ig-like fold AL552_RS07670 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AL552_RS07685 PF01180 Dihydroorotate dehydrogenase AL552_RS07695 PF02926 THUMP domain AL552_RS07695 PF01170 Putative RNA methylase family UPF0020 AL552_RS07695 PF10672 S-adenosylmethionine-dependent methyltransferase AL552_RS07705 PF12848 ABC transporter AL552_RS07705 PF16326 ABC transporter C-terminal domain AL552_RS07705 PF00005 ABC transporter AL552_RS07715 PF04957 Ribosome modulation factor AL552_RS07720 PF07977 FabA-like domain AL552_RS07725 PF13654 AAA domain AL552_RS07725 PF05362 Lon protease (S16) C-terminal proteolytic domain AL552_RS07730 PF17414 MatP C-terminal ribbon-helix-helix domain AL552_RS07730 PF06303 MatP N-terminal domain AL552_RS07750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS07750 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS07750 PF09308 LuxQ, periplasmic AL552_RS07750 PF00072 Response regulator receiver domain AL552_RS07765 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL552_RS07780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL552_RS07780 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AL552_RS07790 PF00403 Heavy-metal-associated domain AL552_RS07805 PF13545 Crp-like helix-turn-helix domain AL552_RS07805 PF00027 Cyclic nucleotide-binding domain AL552_RS07810 PF00582 Universal stress protein family AL552_RS07815 PF01171 PP-loop family AL552_RS07835 PF00005 ABC transporter AL552_RS07835 PF08402 TOBE domain AL552_RS07840 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS07845 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS07850 PF13416 Bacterial extracellular solute-binding protein AL552_RS07855 PF13416 Bacterial extracellular solute-binding protein AL552_RS07860 PF02146 Sir2 family AL552_RS07865 PF00909 Ammonium Transporter Family AL552_RS08025 PF13247 4Fe-4S dicluster domain AL552_RS08030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS08030 PF01568 Molydopterin dinucleotide binding domain AL552_RS08030 PF00384 Molybdopterin oxidoreductase AL552_RS08040 PF02613 Nitrate reductase delta subunit AL552_RS08060 PF02634 FdhD/NarQ family AL552_RS08065 PF00005 ABC transporter AL552_RS08065 PF12848 ABC transporter AL552_RS08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS08075 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS08080 PF02954 Bacterial regulatory protein, Fis family AL552_RS08080 PF00072 Response regulator receiver domain AL552_RS08080 PF00158 Sigma-54 interaction domain AL552_RS08085 PF12849 PBP superfamily domain AL552_RS08090 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS08095 PF00005 ABC transporter AL552_RS08095 PF08402 TOBE domain AL552_RS08100 PF12804 MobA-like NTP transferase domain AL552_RS08105 PF03454 MoeA C-terminal region (domain IV) AL552_RS08105 PF03453 MoeA N-terminal region (domain I and II) AL552_RS08105 PF00994 Probable molybdopterin binding domain AL552_RS08115 PF00480 ROK family AL552_RS08120 PF03942 DTW domain AL552_RS08150 PF00672 HAMP domain AL552_RS08150 PF02743 Cache domain AL552_RS08150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS08155 PF00877 NlpC/P60 family AL552_RS08165 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS08165 PF05230 MASE2 domain AL552_RS08170 PF00072 Response regulator receiver domain AL552_RS08170 PF01339 CheB methylesterase AL552_RS08175 PF03881 Fructosamine kinase AL552_RS08185 PF00677 Lumazine binding domain AL552_RS08190 PF01554 MatE AL552_RS08200 PF14743 DNA ligase OB-like domain AL552_RS08200 PF01068 ATP dependent DNA ligase domain AL552_RS08205 PF01740 STAS domain AL552_RS08215 PF10531 SLBB domain AL552_RS08215 PF02563 Polysaccharide biosynthesis/export protein AL552_RS08235 PF00534 Glycosyl transferases group 1 AL552_RS08235 PF13439 Glycosyltransferase Family 4 AL552_RS08240 PF13439 Glycosyltransferase Family 4 AL552_RS08240 PF00534 Glycosyl transferases group 1 AL552_RS08270 PF00534 Glycosyl transferases group 1 AL552_RS08270 PF13439 Glycosyltransferase Family 4 AL552_RS08280 PF02397 Bacterial sugar transferase AL552_RS08290 PF02028 BCCT, betaine/carnitine/choline family transporter AL552_RS08305 PF00271 Helicase conserved C-terminal domain AL552_RS08305 PF04408 Helicase associated domain (HA2) AL552_RS08305 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AL552_RS08305 PF00270 DEAD/DEAH box helicase AL552_RS08305 PF11898 Domain of unknown function (DUF3418) AL552_RS08310 PF02525 Flavodoxin-like fold AL552_RS08345 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS08355 PF00012 Hsp70 protein AL552_RS08360 PF00012 Hsp70 protein AL552_RS08380 PF07963 Prokaryotic N-terminal methylation motif AL552_RS08385 PF00664 ABC transporter transmembrane region AL552_RS08385 PF00005 ABC transporter AL552_RS08390 PF00664 ABC transporter transmembrane region AL552_RS08390 PF00005 ABC transporter AL552_RS08400 PF07715 TonB-dependent Receptor Plug Domain AL552_RS08400 PF00593 TonB dependent receptor AL552_RS08405 PF01032 FecCD transport family AL552_RS08410 PF01497 Periplasmic binding protein AL552_RS08415 PF00005 ABC transporter AL552_RS08430 PF03222 Tryptophan/tyrosine permease family AL552_RS08435 PF00465 Iron-containing alcohol dehydrogenase AL552_RS08440 PF01966 HD domain AL552_RS08450 PF03741 Integral membrane protein TerC family AL552_RS08460 PF04055 Radical SAM superfamily AL552_RS08465 PF11230 Protein of unknown function (DUF3029) AL552_RS08470 PF01810 LysE type translocator AL552_RS08475 PF11871 Domain of unknown function (DUF3391) AL552_RS08475 PF01966 HD domain AL552_RS08485 PF02954 Bacterial regulatory protein, Fis family AL552_RS08485 PF00072 Response regulator receiver domain AL552_RS08485 PF00158 Sigma-54 interaction domain AL552_RS08490 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS08515 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS08515 PF00072 Response regulator receiver domain AL552_RS08520 PF03928 Haem-degrading AL552_RS08525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AL552_RS08525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL552_RS08530 PF00455 DeoR C terminal sensor domain AL552_RS08530 PF08220 DeoR-like helix-turn-helix domain AL552_RS08545 PF04055 Radical SAM superfamily AL552_RS08545 PF13186 Iron-sulfur cluster-binding domain AL552_RS08550 PF03781 Sulfatase-modifying factor enzyme 1 AL552_RS08560 PF00884 Sulfatase AL552_RS08565 PF13533 Biotin-lipoyl like AL552_RS08575 PF03466 LysR substrate binding domain AL552_RS08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS08585 PF13533 Biotin-lipoyl like AL552_RS08600 PF01810 LysE type translocator AL552_RS08610 PF07237 Protein of unknown function (DUF1428) AL552_RS08655 PF13276 HTH-like domain AL552_RS08655 PF00665 Integrase core domain AL552_RS08655 PF13333 Integrase core domain AL552_RS09040 PF00293 NUDIX domain AL552_RS09155 PF05016 ParE toxin of type II toxin-antitoxin system, parDE AL552_RS09330 PF00293 NUDIX domain AL552_RS09410 PF04463 Protein of unknown function (DUF523) AL552_RS09420 PF13676 TIR domain AL552_RS09875 PF00589 Phage integrase family AL552_RS09875 PF13495 Phage integrase, N-terminal SAM-like domain AL552_RS09890 PF13302 Acetyltransferase (GNAT) domain AL552_RS09895 PF00158 Sigma-54 interaction domain AL552_RS09895 PF18024 Helix-turn-helix domain AL552_RS09900 PF05128 Domain of unknown function (DUF697) AL552_RS09905 PF04317 YcjX-like family, DUF463 AL552_RS09925 PF04715 Anthranilate synthase component I, N terminal region AL552_RS09925 PF00425 chorismate binding enzyme AL552_RS09930 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS09930 PF09308 LuxQ, periplasmic AL552_RS09930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS09930 PF00072 Response regulator receiver domain AL552_RS09940 PF00293 NUDIX domain AL552_RS09945 PF03222 Tryptophan/tyrosine permease family AL552_RS09950 PF03315 Serine dehydratase beta chain AL552_RS09950 PF03313 Serine dehydratase alpha chain AL552_RS09955 PF04940 Sensors of blue-light using FAD AL552_RS09955 PF00563 EAL domain AL552_RS09965 PF01242 6-pyruvoyl tetrahydropterin synthase AL552_RS09970 PF17200 Single Cache domain 2 AL552_RS09970 PF00672 HAMP domain AL552_RS09970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS09975 PF00152 tRNA synthetases class II (D, K and N) AL552_RS09975 PF01336 OB-fold nucleic acid binding domain AL552_RS09985 PF00155 Aminotransferase class I and II AL552_RS09985 PF00392 Bacterial regulatory proteins, gntR family AL552_RS10000 PF00155 Aminotransferase class I and II AL552_RS10020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS10020 PF00672 HAMP domain AL552_RS10025 PF02028 BCCT, betaine/carnitine/choline family transporter AL552_RS10035 PF00072 Response regulator receiver domain AL552_RS10035 PF00196 Bacterial regulatory proteins, luxR family AL552_RS10040 PF17200 Single Cache domain 2 AL552_RS10040 PF07730 Histidine kinase AL552_RS10045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL552_RS10055 PF03480 Bacterial extracellular solute-binding protein, family 7 AL552_RS10070 PF00753 Metallo-beta-lactamase superfamily AL552_RS10075 PF05951 Bacterial protein of unknown function (DUF882) AL552_RS10080 PF01471 Putative peptidoglycan binding domain AL552_RS10080 PF03734 L,D-transpeptidase catalytic domain AL552_RS10105 PF00925 GTP cyclohydrolase II AL552_RS10115 PF03918 Cytochrome C biogenesis protein AL552_RS10120 PF08534 Redoxin AL552_RS10125 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL552_RS10125 PF01578 Cytochrome C assembly protein AL552_RS10130 PF03916 Polysulphide reductase, NrfD AL552_RS10135 PF13247 4Fe-4S dicluster domain AL552_RS10145 PF02335 Cytochrome c552 AL552_RS10160 PF03989 DNA gyrase C-terminal domain, beta-propeller AL552_RS10160 PF00521 DNA gyrase/topoisomerase IV, subunit A AL552_RS10170 PF03477 ATP cone domain AL552_RS10170 PF02867 Ribonucleotide reductase, barrel domain AL552_RS10170 PF00317 Ribonucleotide reductase, all-alpha domain AL552_RS10175 PF00268 Ribonucleotide reductase, small chain AL552_RS10185 PF00994 Probable molybdopterin binding domain AL552_RS10200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL552_RS10205 PF16653 Saccharopine dehydrogenase C-terminal domain AL552_RS10205 PF03435 Saccharopine dehydrogenase NADP binding domain AL552_RS10210 PF00202 Aminotransferase class-III AL552_RS10235 PF01066 CDP-alcohol phosphatidyltransferase AL552_RS10240 PF08459 UvrC Helix-hairpin-helix N-terminal AL552_RS10240 PF02151 UvrB/uvrC motif AL552_RS10240 PF01541 GIY-YIG catalytic domain AL552_RS10245 PF00196 Bacterial regulatory proteins, luxR family AL552_RS10245 PF00072 Response regulator receiver domain AL552_RS10250 PF03104 DNA polymerase family B, exonuclease domain AL552_RS10250 PF00136 DNA polymerase family B AL552_RS10260 PF09285 Elongation factor P, C-terminal AL552_RS10260 PF01132 Elongation factor P (EF-P) OB domain AL552_RS10260 PF08207 Elongation factor P (EF-P) KOW-like domain AL552_RS10265 PF04269 Protein of unknown function, DUF440 AL552_RS10270 PF01479 S4 domain AL552_RS10270 PF00849 RNA pseudouridylate synthase AL552_RS10280 PF01300 Telomere recombination AL552_RS10285 PF02811 PHP domain AL552_RS10290 PF08056 Tryptophan operon leader peptide AL552_RS10295 PF00425 chorismate binding enzyme AL552_RS10295 PF04715 Anthranilate synthase component I, N terminal region AL552_RS10300 PF00117 Glutamine amidotransferase class-I AL552_RS10305 PF02885 Glycosyl transferase family, helical bundle domain AL552_RS10305 PF00591 Glycosyl transferase family, a/b domain AL552_RS10310 PF00218 Indole-3-glycerol phosphate synthase AL552_RS10310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AL552_RS10315 PF00291 Pyridoxal-phosphate dependent enzyme AL552_RS10320 PF00290 Tryptophan synthase alpha chain AL552_RS10325 PF13545 Crp-like helix-turn-helix domain AL552_RS10325 PF00027 Cyclic nucleotide-binding domain AL552_RS10330 PF00501 AMP-binding enzyme AL552_RS10330 PF13193 AMP-binding enzyme C-terminal domain AL552_RS10340 PF00375 Sodium:dicarboxylate symporter family AL552_RS10345 PF17327 Acyl homoserine lactone synthase AL552_RS10350 PF00072 Response regulator receiver domain AL552_RS10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS10360 PF04279 Intracellular septation protein A AL552_RS10365 PF03061 Thioesterase superfamily AL552_RS10370 PF03795 YCII-related domain AL552_RS10380 PF08267 Cobalamin-independent synthase, N-terminal domain AL552_RS10380 PF01717 Cobalamin-independent synthase, Catalytic domain AL552_RS10400 PF08447 PAS fold AL552_RS10400 PF00563 EAL domain AL552_RS10400 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS10400 PF08448 PAS fold AL552_RS10405 PF08497 Radical SAM N-terminal AL552_RS10405 PF04055 Radical SAM superfamily AL552_RS10405 PF11842 Domain of unknown function (DUF3362) AL552_RS10410 PF00672 HAMP domain AL552_RS10410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS10420 PF00072 Response regulator receiver domain AL552_RS10420 PF00486 Transcriptional regulatory protein, C terminal AL552_RS10425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS10425 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS10425 PF00672 HAMP domain AL552_RS10440 PF03466 LysR substrate binding domain AL552_RS10440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS10445 PF00529 HlyD membrane-fusion protein of T1SS AL552_RS10445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS10455 PF08267 Cobalamin-independent synthase, N-terminal domain AL552_RS10455 PF01717 Cobalamin-independent synthase, Catalytic domain AL552_RS10475 PF00005 ABC transporter AL552_RS10475 PF02687 FtsX-like permease family AL552_RS10475 PF12704 MacB-like periplasmic core domain AL552_RS10480 PF00005 ABC transporter AL552_RS10480 PF12704 MacB-like periplasmic core domain AL552_RS10480 PF02687 FtsX-like permease family AL552_RS10485 PF00005 ABC transporter AL552_RS10485 PF02687 FtsX-like permease family AL552_RS10485 PF12704 MacB-like periplasmic core domain AL552_RS10495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS10510 PF05958 tRNA (Uracil-5-)-methyltransferase AL552_RS10510 PF01938 TRAM domain AL552_RS10525 PF00085 Thioredoxin AL552_RS10530 PF11412 Disulphide bond corrector protein DsbC AL552_RS10530 PF02683 Cytochrome C biogenesis protein transmembrane region AL552_RS10540 PF00196 Bacterial regulatory proteins, luxR family AL552_RS10540 PF00072 Response regulator receiver domain AL552_RS10545 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS10550 PF13247 4Fe-4S dicluster domain AL552_RS10555 PF03916 Polysulphide reductase, NrfD AL552_RS10560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS10560 PF00384 Molybdopterin oxidoreductase AL552_RS10560 PF01568 Molydopterin dinucleotide binding domain AL552_RS10565 PF00034 Cytochrome c AL552_RS10570 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL552_RS10575 PF04403 Paraquat-inducible protein A AL552_RS10580 PF02470 MlaD protein AL552_RS10595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL552_RS10600 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AL552_RS10605 PF18073 Rubredoxin metal binding domain AL552_RS10610 PF06305 Lipopolysaccharide assembly protein A domain AL552_RS10615 PF00216 Bacterial DNA-binding protein AL552_RS10620 PF00575 S1 RNA binding domain AL552_RS10625 PF02224 Cytidylate kinase AL552_RS10630 PF08496 Peptidase family S49 N-terminal AL552_RS10630 PF01343 Peptidase family S49 AL552_RS10635 PF00106 short chain dehydrogenase AL552_RS10650 PF14579 Helix-hairpin-helix motif AL552_RS10650 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL552_RS10650 PF01336 OB-fold nucleic acid binding domain AL552_RS10650 PF02811 PHP domain AL552_RS10650 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL552_RS10655 PF00072 Response regulator receiver domain AL552_RS10655 PF01584 CheW-like domain AL552_RS10660 PF00480 ROK family AL552_RS10665 PF02887 Pyruvate kinase, alpha/beta domain AL552_RS10665 PF00224 Pyruvate kinase, barrel domain AL552_RS10670 PF01734 Patatin-like phospholipase AL552_RS10685 PF00209 Sodium:neurotransmitter symporter family AL552_RS10700 PF02378 Phosphotransferase system, EIIC AL552_RS10700 PF00367 phosphotransferase system, EIIB AL552_RS10705 PF01026 TatD related DNase AL552_RS10710 PF09115 DNA polymerase III, delta subunit, C terminal AL552_RS10715 PF02223 Thymidylate kinase AL552_RS10720 PF02618 YceG-like family AL552_RS10725 PF01063 Amino-transferase class IV AL552_RS10730 PF00109 Beta-ketoacyl synthase, N-terminal domain AL552_RS10730 PF02801 Beta-ketoacyl synthase, C-terminal domain AL552_RS10735 PF00550 Phosphopantetheine attachment site AL552_RS10745 PF00698 Acyl transferase domain AL552_RS10750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL552_RS10750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL552_RS10755 PF02504 Fatty acid synthesis protein AL552_RS10760 PF01783 Ribosomal L32p protein family AL552_RS10765 PF02620 Large ribosomal RNA subunit accumulation protein YceD AL552_RS10770 PF02545 Maf-like protein AL552_RS10775 PF01479 S4 domain AL552_RS10775 PF00849 RNA pseudouridylate synthase AL552_RS10780 PF00575 S1 RNA binding domain AL552_RS10780 PF10150 Ribonuclease E/G family AL552_RS10780 PF12111 Polyribonucleotide phosphorylase C terminal AL552_RS10790 PF01740 STAS domain AL552_RS10790 PF00916 Sulfate permease family AL552_RS10795 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL552_RS10800 PF12557 Cob(I)alamin adenosyltransferase N terminal AL552_RS10800 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AL552_RS10810 PF00485 Phosphoribulokinase / Uridine kinase family AL552_RS10815 PF10609 NUBPL iron-transfer P-loop NTPase AL552_RS10820 PF09334 tRNA synthetases class I (M) AL552_RS10820 PF01588 Putative tRNA binding domain AL552_RS10845 PF07840 FadR C-terminal domain AL552_RS10845 PF00392 Bacterial regulatory proteins, gntR family AL552_RS10850 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AL552_RS10855 PF02600 Disulfide bond formation protein DsbB AL552_RS10860 PF07517 SecA DEAD-like domain AL552_RS10860 PF07516 SecA Wing and Scaffold domain AL552_RS10860 PF01043 SecA preprotein cross-linking domain AL552_RS10860 PF02810 SEC-C motif AL552_RS10865 PF01207 Dihydrouridine synthase (Dus) AL552_RS10870 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS10870 PF17158 Membrane-associated sensor, integral membrane domain AL552_RS10875 PF02903 Alpha amylase, N-terminal ig-like domain AL552_RS10875 PF00128 Alpha amylase, catalytic domain AL552_RS10880 PF00005 ABC transporter AL552_RS10885 PF02653 Branched-chain amino acid transport system / permease component AL552_RS10895 PF04217 Protein of unknown function, DUF412 AL552_RS10900 PF00871 Acetokinase family AL552_RS10910 PF13194 Domain of unknown function (DUF4010) AL552_RS10920 PF13409 Glutathione S-transferase, N-terminal domain AL552_RS10925 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS10925 PF00005 ABC transporter AL552_RS10930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS10930 PF00005 ABC transporter AL552_RS10935 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS10935 PF12911 N-terminal TM domain of oligopeptide transport permease C AL552_RS10940 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS10945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL552_RS10950 PF02391 MoaE protein AL552_RS10955 PF02597 ThiS family AL552_RS10960 PF01967 MoaC family AL552_RS10965 PF00994 Probable molybdopterin binding domain AL552_RS10970 PF04055 Radical SAM superfamily AL552_RS10970 PF06463 Molybdenum Cofactor Synthesis C AL552_RS10975 PF01933 Uncharacterised protein family UPF0052 AL552_RS10980 PF01627 Hpt domain AL552_RS10985 PF00072 Response regulator receiver domain AL552_RS10985 PF00158 Sigma-54 interaction domain AL552_RS10985 PF02954 Bacterial regulatory protein, Fis family AL552_RS10990 PF00271 Helicase conserved C-terminal domain AL552_RS10990 PF04851 Type III restriction enzyme, res subunit AL552_RS10990 PF02151 UvrB/uvrC motif AL552_RS10990 PF12344 Ultra-violet resistance protein B AL552_RS10990 PF17757 UvrB interaction domain AL552_RS11000 PF02508 Rnf-Nqr subunit, membrane protein AL552_RS11005 PF04060 Putative Fe-S cluster AL552_RS11010 PF12838 4Fe-4S dicluster domain AL552_RS11010 PF13375 RnfC Barrel sandwich hybrid domain AL552_RS11010 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AL552_RS11010 PF10531 SLBB domain AL552_RS11015 PF03116 NQR2, RnfD, RnfE family AL552_RS11020 PF04205 FMN-binding domain AL552_RS11025 PF02508 Rnf-Nqr subunit, membrane protein AL552_RS11030 PF10576 Iron-sulfur binding domain of endonuclease III AL552_RS11030 PF00633 Helix-hairpin-helix motif AL552_RS11030 PF00730 HhH-GPD superfamily base excision DNA repair protein AL552_RS11035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL552_RS11040 PF10952 Protein of unknown function (DUF2753) AL552_RS11045 PF00691 OmpA family AL552_RS11045 PF18393 MotY N-terminal domain AL552_RS11055 PF00929 Exonuclease AL552_RS11060 PF03553 Na+/H+ antiporter family AL552_RS11060 PF13726 Na+-H+ antiporter family AL552_RS11070 PF00462 Glutaredoxin AL552_RS11075 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL552_RS11075 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL552_RS11090 PF00465 Iron-containing alcohol dehydrogenase AL552_RS11090 PF00171 Aldehyde dehydrogenase family AL552_RS11095 PF01914 MarC family integral membrane protein AL552_RS11100 PF00520 Ion transport protein AL552_RS11100 PF00027 Cyclic nucleotide-binding domain AL552_RS11105 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL552_RS11105 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL552_RS11110 PF03553 Na+/H+ antiporter family AL552_RS11125 PF04245 37-kD nucleoid-associated bacterial protein AL552_RS11130 PF07208 Protein of unknown function (DUF1414) AL552_RS11135 PF11893 Domain of unknown function (DUF3413) AL552_RS11135 PF00884 Sulfatase AL552_RS11145 PF00850 Histone deacetylase domain AL552_RS11150 PF00106 short chain dehydrogenase AL552_RS11160 PF01751 Toprim domain AL552_RS11160 PF01131 DNA topoisomerase AL552_RS11165 PF00881 Nitroreductase family AL552_RS11175 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS11175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL552_RS11180 PF01343 Peptidase family S49 AL552_RS11185 PF17763 Glutaminase/Asparaginase C-terminal domain AL552_RS11185 PF00710 Asparaginase, N-terminal AL552_RS11190 PF07023 Protein of unknown function (DUF1315) AL552_RS11200 PF01641 SelR domain AL552_RS11205 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL552_RS11205 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_RS11210 PF01263 Aldose 1-epimerase AL552_RS11215 PF00672 HAMP domain AL552_RS11215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS11215 PF02743 Cache domain AL552_RS11220 PF13847 Methyltransferase domain AL552_RS11240 PF00245 Alkaline phosphatase AL552_RS11250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL552_RS11255 PF03992 Antibiotic biosynthesis monooxygenase AL552_RS11260 PF05552 Conserved TM helix AL552_RS11260 PF00924 Mechanosensitive ion channel AL552_RS11265 PF03692 Putative zinc- or iron-chelating domain AL552_RS11270 PF04226 Transglycosylase associated protein AL552_RS11275 PF03692 Putative zinc- or iron-chelating domain AL552_RS11285 PF03313 Serine dehydratase alpha chain AL552_RS11290 PF01042 Endoribonuclease L-PSP AL552_RS11300 PF00230 Major intrinsic protein AL552_RS11305 PF13662 Toprim domain AL552_RS11305 PF02132 RecR protein AL552_RS11310 PF02575 YbaB/EbfC DNA-binding family AL552_RS11315 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AL552_RS11315 PF12169 DNA polymerase III subunits gamma and tau domain III AL552_RS11315 PF12170 DNA polymerase III tau subunit V interacting with alpha AL552_RS11320 PF00156 Phosphoribosyl transferase domain AL552_RS11335 PF00072 Response regulator receiver domain AL552_RS11340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS11340 PF03466 LysR substrate binding domain AL552_RS11345 PF00156 Phosphoribosyl transferase domain AL552_RS11350 PF02674 Colicin V production protein AL552_RS11355 PF05036 Sporulation related domain AL552_RS11360 PF02875 Mur ligase family, glutamate ligase domain AL552_RS11360 PF08245 Mur ligase middle domain AL552_RS11365 PF17848 Acetyl-coA carboxylase zinc finger domain AL552_RS11365 PF01039 Carboxyl transferase domain AL552_RS11375 PF01416 tRNA pseudouridine synthase AL552_RS11385 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL552_RS11385 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL552_RS11390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL552_RS11390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL552_RS11390 PF11890 Domain of unknown function (DUF3410) AL552_RS11395 PF02801 Beta-ketoacyl synthase, C-terminal domain AL552_RS11395 PF00109 Beta-ketoacyl synthase, N-terminal domain AL552_RS11400 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AL552_RS11400 PF01266 FAD dependent oxidoreductase AL552_RS11405 PF03358 NADPH-dependent FMN reductase AL552_RS11415 PF08891 YfcL protein AL552_RS11420 PF04315 Elongation factor P hydroxylase AL552_RS11430 PF03458 UPF0126 domain AL552_RS11435 PF01264 Chorismate synthase AL552_RS11440 PF05175 Methyltransferase small domain AL552_RS11445 PF01713 Smr domain AL552_RS11450 PF00300 Histidine phosphatase superfamily (branch 1) AL552_RS11455 PF16187 Middle or third domain of peptidase_M16 AL552_RS11455 PF05193 Peptidase M16 inactive domain AL552_RS11455 PF00675 Insulinase (Peptidase family M16) AL552_RS11465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL552_RS11465 PF00378 Enoyl-CoA hydratase/isomerase AL552_RS11465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL552_RS11470 PF00108 Thiolase, N-terminal domain AL552_RS11470 PF02803 Thiolase, C-terminal domain AL552_RS11475 PF04542 Sigma-70 region 2 AL552_RS11475 PF08281 Sigma-70, region 4 AL552_RS11485 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL552_RS11490 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL552_RS11500 PF03918 Cytochrome C biogenesis protein AL552_RS11505 PF03918 Cytochrome C biogenesis protein AL552_RS11510 PF08534 Redoxin AL552_RS11515 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AL552_RS11515 PF01578 Cytochrome C assembly protein AL552_RS11520 PF03100 CcmE AL552_RS11525 PF04995 Heme exporter protein D (CcmD) AL552_RS11530 PF01578 Cytochrome C assembly protein AL552_RS11535 PF03379 CcmB protein AL552_RS11540 PF00005 ABC transporter AL552_RS11550 PF01584 CheW-like domain AL552_RS11560 PF13614 AAA domain AL552_RS11565 PF01339 CheB methylesterase AL552_RS11565 PF00072 Response regulator receiver domain AL552_RS11570 PF01627 Hpt domain AL552_RS11570 PF01584 CheW-like domain AL552_RS11570 PF02895 Signal transducing histidine kinase, homodimeric domain AL552_RS11570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS11570 PF00072 Response regulator receiver domain AL552_RS11575 PF04344 Chemotaxis phosphatase, CheZ AL552_RS11580 PF00072 Response regulator receiver domain AL552_RS11585 PF04539 Sigma-70 region 3 AL552_RS11585 PF04542 Sigma-70 region 2 AL552_RS11585 PF04545 Sigma-70, region 4 AL552_RS11590 PF10609 NUBPL iron-transfer P-loop NTPase AL552_RS11595 PF00448 SRP54-type protein, GTPase domain AL552_RS11600 PF00771 FHIPEP family AL552_RS11605 PF01312 FlhB HrpN YscU SpaS Family AL552_RS11610 PF01311 Bacterial export proteins, family 1 AL552_RS11615 PF01313 Bacterial export proteins, family 3 AL552_RS11620 PF00813 FliP family AL552_RS11625 PF04347 Flagellar biosynthesis protein, FliO AL552_RS11630 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL552_RS11635 PF02154 Flagellar motor switch protein FliM AL552_RS11635 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL552_RS11655 PF18269 T3SS EscN ATPase C-terminal domain AL552_RS11655 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL552_RS11665 PF01706 FliG C-terminal domain AL552_RS11665 PF14842 FliG N-terminal domain AL552_RS11665 PF14841 FliG middle domain AL552_RS11670 PF01514 Secretory protein of YscJ/FliF family AL552_RS11670 PF08345 Flagellar M-ring protein C-terminal AL552_RS11675 PF02049 Flagellar hook-basal body complex protein FliE AL552_RS11680 PF02954 Bacterial regulatory protein, Fis family AL552_RS11680 PF00072 Response regulator receiver domain AL552_RS11680 PF00158 Sigma-54 interaction domain AL552_RS11685 PF13188 PAS domain AL552_RS11685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS11685 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS11690 PF00158 Sigma-54 interaction domain AL552_RS11690 PF02954 Bacterial regulatory protein, Fis family AL552_RS11690 PF06490 Flagellar regulatory protein FleQ AL552_RS11695 PF02561 Flagellar protein FliS AL552_RS11705 PF07196 Flagellin hook IN motif AL552_RS11705 PF02465 Flagellar hook-associated protein 2 N-terminus AL552_RS11705 PF07195 Flagellar hook-associated protein 2 C-terminus AL552_RS11710 PF03646 FlaG protein AL552_RS11715 PF00700 Bacterial flagellin C-terminal helical region AL552_RS11715 PF07196 Flagellin hook IN motif AL552_RS11715 PF00669 Bacterial flagellin N-terminal helical region AL552_RS11720 PF07196 Flagellin hook IN motif AL552_RS11720 PF00700 Bacterial flagellin C-terminal helical region AL552_RS11720 PF00669 Bacterial flagellin N-terminal helical region AL552_RS11730 PF00669 Bacterial flagellin N-terminal helical region AL552_RS11730 PF00700 Bacterial flagellin C-terminal helical region AL552_RS11730 PF07196 Flagellin hook IN motif AL552_RS11735 PF04261 Dyp-type peroxidase family AL552_RS11740 PF11143 Protein of unknown function (DUF2919) AL552_RS11760 PF03960 ArsC family AL552_RS11765 PF01546 Peptidase family M20/M25/M40 AL552_RS11765 PF07687 Peptidase dimerisation domain AL552_RS11780 PF06804 NlpB/DapX lipoprotein AL552_RS11785 PF00701 Dihydrodipicolinate synthetase family AL552_RS11795 PF00578 AhpC/TSA family AL552_RS11800 PF01594 AI-2E family transporter AL552_RS11810 PF13181 Tetratricopeptide repeat AL552_RS11810 PF01435 Peptidase family M48 AL552_RS11815 PF03960 ArsC family AL552_RS11820 PF03358 NADPH-dependent FMN reductase AL552_RS11835 PF00860 Permease family AL552_RS11845 PF00586 AIR synthase related protein, N-terminal domain AL552_RS11845 PF02769 AIR synthase related protein, C-terminal domain AL552_RS11850 PF00551 Formyl transferase AL552_RS11855 PF13230 Glutamine amidotransferases class-II AL552_RS11860 PF13580 SIS domain AL552_RS11865 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL552_RS11865 PF02770 Acyl-CoA dehydrogenase, middle domain AL552_RS11865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL552_RS11865 PF09317 Domain of unknown function (DUF1974) AL552_RS11870 PF01740 STAS domain AL552_RS11870 PF00916 Sulfate permease family AL552_RS11895 PF00929 Exonuclease AL552_RS11900 PF00075 RNase H AL552_RS11905 PF08241 Methyltransferase domain AL552_RS11910 PF00753 Metallo-beta-lactamase superfamily AL552_RS11910 PF16123 Hydroxyacylglutathione hydrolase C-terminus AL552_RS11915 PF01464 Transglycosylase SLT domain AL552_RS11915 PF01476 LysM domain AL552_RS11925 PF03372 Endonuclease/Exonuclease/phosphatase family AL552_RS11930 PF00543 Nitrogen regulatory protein P-II AL552_RS11935 PF00034 Cytochrome c AL552_RS11940 PF01171 PP-loop family AL552_RS11940 PF11734 TilS substrate C-terminal domain AL552_RS11940 PF09179 TilS substrate binding domain AL552_RS11945 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AL552_RS11950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL552_RS11950 PF02811 PHP domain AL552_RS11950 PF14579 Helix-hairpin-helix motif AL552_RS11950 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL552_RS11950 PF01336 OB-fold nucleic acid binding domain AL552_RS11955 PF01351 Ribonuclease HII AL552_RS11960 PF02684 Lipid-A-disaccharide synthetase AL552_RS11965 PF00132 Bacterial transferase hexapeptide (six repeats) AL552_RS11965 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AL552_RS11970 PF07977 FabA-like domain AL552_RS11975 PF00132 Bacterial transferase hexapeptide (six repeats) AL552_RS11975 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AL552_RS11980 PF03938 Outer membrane protein (OmpH-like) AL552_RS11990 PF17820 PDZ domain AL552_RS11990 PF02163 Peptidase family M50 AL552_RS11995 PF13288 DXP reductoisomerase C-terminal domain AL552_RS11995 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AL552_RS11995 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AL552_RS12005 PF01255 Putative undecaprenyl diphosphate synthase AL552_RS12010 PF01765 Ribosome recycling factor AL552_RS12015 PF00696 Amino acid kinase family AL552_RS12020 PF00889 Elongation factor TS AL552_RS12025 PF00318 Ribosomal protein S2 AL552_RS12030 PF00557 Metallopeptidase family M24 AL552_RS12040 PF11944 Protein of unknown function (DUF3461) AL552_RS12045 PF00849 RNA pseudouridylate synthase AL552_RS12050 PF00849 RNA pseudouridylate synthase AL552_RS12050 PF04287 tRNA pseudouridine synthase C AL552_RS12075 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AL552_RS12080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL552_RS12080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL552_RS12085 PF01370 NAD dependent epimerase/dehydratase family AL552_RS12110 PF03806 AbgT putative transporter family AL552_RS12115 PF00444 Ribosomal protein L36 AL552_RS12120 PF01197 Ribosomal protein L31 AL552_RS12125 PF01980 tRNA-methyltransferase O AL552_RS12125 PF18389 TrmO C-terminal domain AL552_RS12130 PF03129 Anticodon binding domain AL552_RS12130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AL552_RS12130 PF04073 Aminoacyl-tRNA editing domain AL552_RS12140 PF06786 Uncharacterised protein family (UPF0253) AL552_RS12150 PF00209 Sodium:neurotransmitter symporter family AL552_RS12155 PF00704 Glycosyl hydrolases family 18 AL552_RS12155 PF06483 Chitinase C AL552_RS12165 PF03449 Transcription elongation factor, N-terminal AL552_RS12165 PF01272 Transcription elongation factor, GreA/GreB, C-term AL552_RS12170 PF00270 DEAD/DEAH box helicase AL552_RS12170 PF16124 RecQ zinc-binding AL552_RS12170 PF09382 RQC domain AL552_RS12170 PF00570 HRDC domain AL552_RS12170 PF00271 Helicase conserved C-terminal domain AL552_RS12190 PF02424 ApbE family AL552_RS12195 PF00970 Oxidoreductase FAD-binding domain AL552_RS12195 PF00111 2Fe-2S iron-sulfur cluster binding domain AL552_RS12195 PF00175 Oxidoreductase NAD-binding domain AL552_RS12200 PF02508 Rnf-Nqr subunit, membrane protein AL552_RS12205 PF02508 Rnf-Nqr subunit, membrane protein AL552_RS12210 PF04205 FMN-binding domain AL552_RS12215 PF03116 NQR2, RnfD, RnfE family AL552_RS12220 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) AL552_RS12220 PF11973 NQRA C-terminal domain AL552_RS12230 PF01722 BolA-like protein AL552_RS12235 PF05175 Methyltransferase small domain AL552_RS12240 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AL552_RS12240 PF03923 Uncharacterized lipoprotein AL552_RS12245 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL552_RS12250 PF07690 Major Facilitator Superfamily AL552_RS12260 PF04542 Sigma-70 region 2 AL552_RS12260 PF04545 Sigma-70, region 4 AL552_RS12280 PF03502 Nucleoside-specific channel-forming protein, Tsx AL552_RS12285 PF02558 Ketopantoate reductase PanE/ApbA AL552_RS12285 PF08546 Ketopantoate reductase PanE/ApbA C terminal AL552_RS12290 PF01965 DJ-1/PfpI family AL552_RS12295 PF00266 Aminotransferase class-V AL552_RS12300 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS12300 PF17158 Membrane-associated sensor, integral membrane domain AL552_RS12305 PF02657 Fe-S metabolism associated domain AL552_RS12310 PF00899 ThiF family AL552_RS12315 PF03562 MltA specific insert domain AL552_RS12315 PF06725 3D domain AL552_RS12330 PF00696 Amino acid kinase family AL552_RS12330 PF00583 Acetyltransferase (GNAT) family AL552_RS12350 PF13538 UvrD-like helicase C-terminal domain AL552_RS12355 PF13361 UvrD-like helicase C-terminal domain AL552_RS12355 PF00580 UvrD/REP helicase N-terminal domain AL552_RS12355 PF12705 PD-(D/E)XK nuclease superfamily AL552_RS12365 PF17946 RecC C-terminal domain AL552_RS12370 PF11893 Domain of unknown function (DUF3413) AL552_RS12370 PF00884 Sulfatase AL552_RS12380 PF03466 LysR substrate binding domain AL552_RS12380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS12385 PF07130 YebG protein AL552_RS12390 PF14602 Hexapeptide repeat of succinyl-transferase AL552_RS12390 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle AL552_RS12395 PF03009 Glycerophosphoryl diester phosphodiesterase family AL552_RS12400 PF07690 Major Facilitator Superfamily AL552_RS12410 PF00230 Major intrinsic protein AL552_RS12415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AL552_RS12415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AL552_RS12420 PF00455 DeoR C terminal sensor domain AL552_RS12420 PF08220 DeoR-like helix-turn-helix domain AL552_RS12425 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AL552_RS12425 PF01266 FAD dependent oxidoreductase AL552_RS12430 PF01544 CorA-like Mg2+ transporter protein AL552_RS12445 PF01588 Putative tRNA binding domain AL552_RS12450 PF00356 Bacterial regulatory proteins, lacI family AL552_RS12455 PF00929 Exonuclease AL552_RS12455 PF02811 PHP domain AL552_RS12455 PF14579 Helix-hairpin-helix motif AL552_RS12455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL552_RS12455 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL552_RS12465 PF00474 Sodium:solute symporter family AL552_RS12470 PF01263 Aldose 1-epimerase AL552_RS12475 PF00288 GHMP kinases N terminal domain AL552_RS12475 PF10509 Galactokinase galactose-binding signature AL552_RS12475 PF08544 GHMP kinases C terminal AL552_RS12480 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AL552_RS12480 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AL552_RS12485 PF16363 GDP-mannose 4,6 dehydratase AL552_RS12495 PF00356 Bacterial regulatory proteins, lacI family AL552_RS12500 PF16353 Domain of unknown function(DUF4981) AL552_RS12500 PF02837 Glycosyl hydrolases family 2, sugar binding domain AL552_RS12500 PF00703 Glycosyl hydrolases family 2 AL552_RS12500 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AL552_RS12500 PF02929 Beta galactosidase small chain AL552_RS12505 PF04074 YhcH/YjgK/YiaL AL552_RS12510 PF13520 Amino acid permease AL552_RS12515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS12515 PF03466 LysR substrate binding domain AL552_RS12545 PF00437 Type II/IV secretion system protein AL552_RS12575 PF13629 Pilus formation protein N terminal region AL552_RS12575 PF00263 Bacterial type II and III secretion system protein AL552_RS12575 PF04972 BON domain AL552_RS12600 PF02805 Metal binding domain of Ada AL552_RS12600 PF12833 Helix-turn-helix domain AL552_RS12605 PF00501 AMP-binding enzyme AL552_RS12620 PF03764 Elongation factor G, domain IV AL552_RS12620 PF03144 Elongation factor Tu domain 2 AL552_RS12620 PF14492 Elongation Factor G, domain II AL552_RS12620 PF00009 Elongation factor Tu GTP binding domain AL552_RS12620 PF00679 Elongation factor G C-terminus AL552_RS12625 PF18073 Rubredoxin metal binding domain AL552_RS12635 PF18429 Domain of unknown function (DUF5609) AL552_RS12645 PF01048 Phosphorylase superfamily AL552_RS12650 PF01676 Metalloenzyme superfamily AL552_RS12655 PF02885 Glycosyl transferase family, helical bundle domain AL552_RS12655 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AL552_RS12655 PF00591 Glycosyl transferase family, a/b domain AL552_RS12660 PF01791 DeoC/LacD family aldolase AL552_RS12670 PF01773 Na+ dependent nucleoside transporter N-terminus AL552_RS12670 PF07670 Nucleoside recognition AL552_RS12670 PF07662 Na+ dependent nucleoside transporter C-terminus AL552_RS12675 PF01026 TatD related DNase AL552_RS12685 PF16658 Class II release factor RF3, C-terminal domain AL552_RS12685 PF03144 Elongation factor Tu domain 2 AL552_RS12685 PF00009 Elongation factor Tu GTP binding domain AL552_RS12705 PF13508 Acetyltransferase (GNAT) domain AL552_RS12710 PF02036 SCP-2 sterol transfer family AL552_RS12720 PF00563 EAL domain AL552_RS12720 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS12720 PF03707 Bacterial signalling protein N terminal repeat AL552_RS12725 PF01136 Peptidase family U32 AL552_RS12730 PF01136 Peptidase family U32 AL552_RS12750 PF00013 KH domain AL552_RS12750 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AL552_RS12750 PF00575 S1 RNA binding domain AL552_RS12750 PF03725 3' exoribonuclease family, domain 2 AL552_RS12750 PF01138 3' exoribonuclease family, domain 1 AL552_RS12755 PF00312 Ribosomal protein S15 AL552_RS12760 PF09157 Pseudouridine synthase II TruB, C-terminal AL552_RS12760 PF16198 tRNA pseudouridylate synthase B C-terminal domain AL552_RS12760 PF01509 TruB family pseudouridylate synthase (N terminal domain) AL552_RS12765 PF02033 Ribosome-binding factor A AL552_RS12770 PF08364 Bacterial translation initiation factor IF-2 associated region AL552_RS12770 PF11987 Translation-initiation factor 2 AL552_RS12770 PF00009 Elongation factor Tu GTP binding domain AL552_RS12770 PF04760 Translation initiation factor IF-2, N-terminal region AL552_RS12775 PF00575 S1 RNA binding domain AL552_RS12775 PF08529 NusA N-terminal domain AL552_RS12775 PF13184 NusA-like KH domain AL552_RS12780 PF17384 RimP C-terminal SH3 domain AL552_RS12780 PF02576 RimP N-terminal domain AL552_RS12795 PF03840 Preprotein translocase SecG subunit AL552_RS12805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL552_RS12805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL552_RS12805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL552_RS12805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL552_RS12810 PF00809 Pterin binding enzyme AL552_RS12815 PF17862 AAA+ lid domain AL552_RS12815 PF00004 ATPase family associated with various cellular activities (AAA) AL552_RS12815 PF01434 Peptidase family M41 AL552_RS12815 PF06480 FtsH Extracellular AL552_RS12820 PF01728 FtsJ-like methyltransferase AL552_RS12825 PF01985 CRS1 / YhbY (CRM) domain AL552_RS12830 PF01272 Transcription elongation factor, GreA/GreB, C-term AL552_RS12830 PF03449 Transcription elongation factor, N-terminal AL552_RS12835 PF13609 Gram-negative porin AL552_RS12840 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AL552_RS12850 PF00579 tRNA synthetases class I (W and Y) AL552_RS12860 PF00873 AcrB/AcrD/AcrF family AL552_RS12870 PF01521 Iron-sulphur cluster biosynthesis AL552_RS12875 PF00202 Aminotransferase class-III AL552_RS12880 PF01594 AI-2E family transporter AL552_RS12885 PF08468 Methyltransferase small domain N-terminal AL552_RS12885 PF05175 Methyltransferase small domain AL552_RS12890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS12890 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS12890 PF09308 LuxQ, periplasmic AL552_RS12890 PF00072 Response regulator receiver domain AL552_RS12895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL552_RS12900 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS12905 PF12911 N-terminal TM domain of oligopeptide transport permease C AL552_RS12905 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS12910 PF00005 ABC transporter AL552_RS12910 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS12915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS12915 PF00005 ABC transporter AL552_RS12925 PF01869 BadF/BadG/BcrA/BcrD ATPase family AL552_RS12930 PF00728 Glycosyl hydrolase family 20, catalytic domain AL552_RS12930 PF02838 Glycosyl hydrolase family 20, domain 2 AL552_RS12935 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain AL552_RS12935 PF06165 Glycosyltransferase family 36 AL552_RS12940 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL552_RS12940 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL552_RS12940 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL552_RS12940 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL552_RS12945 PF00005 ABC transporter AL552_RS12945 PF08402 TOBE domain AL552_RS12955 PF13416 Bacterial extracellular solute-binding protein AL552_RS12960 PF00909 Ammonium Transporter Family AL552_RS12965 PF00543 Nitrogen regulatory protein P-II AL552_RS12970 PF06062 Uncharacterised protein family (UPF0231) AL552_RS12975 PF11791 Aconitate B N-terminal domain AL552_RS12975 PF06434 Aconitate hydratase 2 N-terminus AL552_RS12975 PF00330 Aconitase family (aconitate hydratase) AL552_RS12980 PF01734 Patatin-like phospholipase AL552_RS12985 PF00905 Penicillin binding protein transpeptidase domain AL552_RS12985 PF14814 Bifunctional transglycosylase second domain AL552_RS12985 PF00912 Transglycosylase AL552_RS12990 PF08482 ATP-dependent helicase C-terminal AL552_RS12990 PF00270 DEAD/DEAH box helicase AL552_RS12990 PF04408 Helicase associated domain (HA2) AL552_RS12990 PF00271 Helicase conserved C-terminal domain AL552_RS12995 PF17746 SfsA N-terminal OB domain AL552_RS12995 PF03749 Sugar fermentation stimulation protein RE domain AL552_RS13000 PF01258 Prokaryotic dksA/traR C4-type zinc finger AL552_RS13005 PF00749 tRNA synthetases class I (E and Q), catalytic domain AL552_RS13010 PF12627 Probable RNA and SrmB- binding site of polymerase A AL552_RS13010 PF12626 Polymerase A arginine-rich C-terminus AL552_RS13010 PF01743 Poly A polymerase head domain AL552_RS13015 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AL552_RS13020 PF02548 Ketopantoate hydroxymethyltransferase AL552_RS13025 PF02569 Pantoate-beta-alanine ligase AL552_RS13030 PF03279 Bacterial lipid A biosynthesis acyltransferase AL552_RS13040 PF01061 ABC-2 type transporter AL552_RS13045 PF00005 ABC transporter AL552_RS13050 PF01740 STAS domain AL552_RS13050 PF00916 Sulfate permease family AL552_RS13055 PF00484 Carbonic anhydrase AL552_RS13060 PF00156 Phosphoribosyl transferase domain AL552_RS13065 PF00440 Bacterial regulatory proteins, tetR family AL552_RS13070 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS13070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL552_RS13075 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AL552_RS13075 PF00364 Biotin-requiring enzyme AL552_RS13075 PF02817 e3 binding domain AL552_RS13080 PF17831 Pyruvate dehydrogenase E1 component middle domain AL552_RS13080 PF00456 Transketolase, thiamine diphosphate binding domain AL552_RS13085 PF00392 Bacterial regulatory proteins, gntR family AL552_RS13085 PF07729 FCD domain AL552_RS13090 PF01510 N-acetylmuramoyl-L-alanine amidase AL552_RS13095 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AL552_RS13095 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AL552_RS13100 PF07963 Prokaryotic N-terminal methylation motif AL552_RS13100 PF00114 Pilin (bacterial filament) AL552_RS13105 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL552_RS13105 PF00437 Type II/IV secretion system protein AL552_RS13110 PF00482 Type II secretion system (T2SS), protein F AL552_RS13115 PF06750 Bacterial Peptidase A24 N-terminal domain AL552_RS13115 PF01478 Type IV leader peptidase family AL552_RS13120 PF01121 Dephospho-CoA kinase AL552_RS13125 PF07072 Cell division protein AL552_RS13130 PF03884 DNA gyrase inhibitor YacG AL552_RS13135 PF01245 Ribosomal protein L19 AL552_RS13140 PF01746 tRNA (Guanine-1)-methyltransferase AL552_RS13145 PF01782 RimM N-terminal domain AL552_RS13145 PF05239 PRC-barrel domain AL552_RS13150 PF00886 Ribosomal protein S16 AL552_RS13155 PF02978 Signal peptide binding domain AL552_RS13155 PF00448 SRP54-type protein, GTPase domain AL552_RS13155 PF02881 SRP54-type protein, helical bundle domain AL552_RS13160 PF01578 Cytochrome C assembly protein AL552_RS13165 PF01595 Cyclin M transmembrane N-terminal domain AL552_RS13165 PF03471 Transporter associated domain AL552_RS13165 PF00571 CBS domain AL552_RS13170 PF02664 S-Ribosylhomocysteinase (LuxS) AL552_RS13180 PF04262 Glutamate-cysteine ligase AL552_RS13185 PF00675 Insulinase (Peptidase family M16) AL552_RS13185 PF05193 Peptidase M16 inactive domain AL552_RS13190 PF09335 SNARE associated Golgi protein AL552_RS13195 PF00107 Zinc-binding dehydrogenase AL552_RS13195 PF08240 Alcohol dehydrogenase GroES-like domain AL552_RS13200 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit AL552_RS13205 PF02436 Conserved carboxylase domain AL552_RS13205 PF00682 HMGL-like AL552_RS13205 PF00364 Biotin-requiring enzyme AL552_RS13210 PF04277 Oxaloacetate decarboxylase, gamma chain AL552_RS13270 PF02599 Global regulator protein family AL552_RS13275 PF13840 ACT domain AL552_RS13275 PF01842 ACT domain AL552_RS13275 PF00696 Amino acid kinase family AL552_RS13280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AL552_RS13280 PF02272 DHHA1 domain AL552_RS13280 PF01411 tRNA synthetases class II (A) AL552_RS13285 PF02631 RecX family AL552_RS13290 PF00154 recA bacterial DNA recombination protein AL552_RS13300 PF01624 MutS domain I AL552_RS13300 PF05190 MutS family domain IV AL552_RS13300 PF05192 MutS domain III AL552_RS13300 PF00488 MutS domain V AL552_RS13300 PF05188 MutS domain II AL552_RS13305 PF04542 Sigma-70 region 2 AL552_RS13305 PF04545 Sigma-70, region 4 AL552_RS13305 PF04539 Sigma-70 region 3 AL552_RS13305 PF00140 Sigma-70 factor, region 1.2 AL552_RS13310 PF01551 Peptidase family M23 AL552_RS13310 PF01476 LysM domain AL552_RS13320 PF01975 Survival protein SurE AL552_RS13325 PF01142 tRNA pseudouridine synthase D (TruD) AL552_RS13330 PF02542 YgbB family AL552_RS13335 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AL552_RS13340 PF04977 Septum formation initiator AL552_RS13345 PF03952 Enolase, N-terminal domain AL552_RS13345 PF00113 Enolase, C-terminal TIM barrel domain AL552_RS13350 PF00117 Glutamine amidotransferase class-I AL552_RS13350 PF06418 CTP synthase N-terminus AL552_RS13355 PF03819 MazG nucleotide pyrophosphohydrolase domain AL552_RS13360 PF02824 TGS domain AL552_RS13360 PF04607 Region found in RelA / SpoT proteins AL552_RS13360 PF13291 ACT domain AL552_RS13370 PF01938 TRAM domain AL552_RS13370 PF05958 tRNA (Uracil-5-)-methyltransferase AL552_RS13380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL552_RS13380 PF00072 Response regulator receiver domain AL552_RS13380 PF00672 HAMP domain AL552_RS13380 PF01627 Hpt domain AL552_RS13380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS13380 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS13385 PF01648 4'-phosphopantetheinyl transferase superfamily AL552_RS13390 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AL552_RS13395 PF11967 Recombination protein O N terminal AL552_RS13395 PF02565 Recombination protein O C terminal AL552_RS13400 PF01926 50S ribosome-binding GTPase AL552_RS13400 PF07650 KH domain AL552_RS13405 PF00035 Double-stranded RNA binding motif AL552_RS13405 PF14622 Ribonuclease-III-like AL552_RS13410 PF10502 Signal peptidase, peptidase S26 AL552_RS13415 PF00679 Elongation factor G C-terminus AL552_RS13415 PF03144 Elongation factor Tu domain 2 AL552_RS13415 PF06421 GTP-binding protein LepA C-terminus AL552_RS13415 PF00009 Elongation factor Tu GTP binding domain AL552_RS13425 PF03888 MucB/RseB N-terminal domain AL552_RS13425 PF17188 MucB/RseB C-terminal domain AL552_RS13430 PF03872 Anti sigma-E protein RseA, N-terminal domain AL552_RS13430 PF03873 Anti sigma-E protein RseA, C-terminal domain AL552_RS13435 PF08281 Sigma-70, region 4 AL552_RS13435 PF04542 Sigma-70 region 2 AL552_RS13445 PF00890 FAD binding domain AL552_RS13445 PF02910 Fumarate reductase flavoprotein C-term AL552_RS13455 PF03937 Flavinator of succinate dehydrogenase AL552_RS13460 PF01571 Aminomethyltransferase folate-binding domain AL552_RS13475 PF01494 FAD binding domain AL552_RS13480 PF01494 FAD binding domain AL552_RS13485 PF03695 Uncharacterised protein family (UPF0149) AL552_RS13495 PF05164 Cell division protein ZapA AL552_RS13505 PF01812 5-formyltetrahydrofolate cyclo-ligase family AL552_RS13510 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AL552_RS13515 PF01842 ACT domain AL552_RS13515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL552_RS13515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL552_RS13520 PF04402 Protein of unknown function (DUF541) AL552_RS13525 PF03466 LysR substrate binding domain AL552_RS13525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS13530 PF01810 LysE type translocator AL552_RS13540 PF05552 Conserved TM helix AL552_RS13540 PF00924 Mechanosensitive ion channel AL552_RS13545 PF01116 Fructose-bisphosphate aldolase class-II AL552_RS13550 PF00162 Phosphoglycerate kinase AL552_RS13555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_RS13555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL552_RS13560 PF07715 TonB-dependent Receptor Plug Domain AL552_RS13560 PF00593 TonB dependent receptor AL552_RS13565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS13565 PF03466 LysR substrate binding domain AL552_RS13570 PF00456 Transketolase, thiamine diphosphate binding domain AL552_RS13570 PF02780 Transketolase, C-terminal domain AL552_RS13570 PF02779 Transketolase, pyrimidine binding domain AL552_RS13580 PF02773 S-adenosylmethionine synthetase, C-terminal domain AL552_RS13580 PF00438 S-adenosylmethionine synthetase, N-terminal domain AL552_RS13580 PF02772 S-adenosylmethionine synthetase, central domain AL552_RS13590 PF10263 SprT-like family AL552_RS13590 PF17283 SprT-like zinc ribbon domain AL552_RS13595 PF04231 Endonuclease I AL552_RS13600 PF04452 RNA methyltransferase AL552_RS13605 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AL552_RS13605 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AL552_RS13610 PF02622 Uncharacterized ACR, COG1678 AL552_RS13615 PF03652 Holliday junction resolvase AL552_RS13620 PF00437 Type II/IV secretion system protein AL552_RS13625 PF00437 Type II/IV secretion system protein AL552_RS13630 PF01168 Alanine racemase, N-terminal domain AL552_RS13635 PF03807 NADP oxidoreductase coenzyme F420-dependent AL552_RS13635 PF14748 Pyrroline-5-carboxylate reductase dimerisation AL552_RS13640 PF02325 YGGT family AL552_RS13645 PF02594 Uncharacterised ACR, YggU family COG1872 AL552_RS13655 PF01725 Ham1 family AL552_RS13660 PF04055 Radical SAM superfamily AL552_RS13660 PF06969 HemN C-terminal domain AL552_RS13665 PF04960 Glutaminase AL552_RS13670 PF02086 D12 class N6 adenine-specific DNA methyltransferase AL552_RS13675 PF02390 Putative methyltransferase AL552_RS13680 PF00633 Helix-hairpin-helix motif AL552_RS13680 PF14815 NUDIX domain AL552_RS13680 PF00730 HhH-GPD superfamily base excision DNA repair protein AL552_RS13685 PF04362 Bacterial Fe(2+) trafficking AL552_RS13690 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AL552_RS13690 PF01464 Transglycosylase SLT domain AL552_RS13730 PF17200 Single Cache domain 2 AL552_RS13730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS13730 PF00672 HAMP domain AL552_RS13760 PF00171 Aldehyde dehydrogenase family AL552_RS13810 PF04794 YdjC-like protein AL552_RS13815 PF11975 Family 4 glycosyl hydrolase C-terminal domain AL552_RS13815 PF02056 Family 4 glycosyl hydrolase AL552_RS13820 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AL552_RS13825 PF02378 Phosphotransferase system, EIIC AL552_RS13830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL552_RS13835 PF01522 Polysaccharide deacetylase AL552_RS13850 PF10011 Predicted membrane protein (DUF2254) AL552_RS13860 PF03739 Lipopolysaccharide export system permease LptF/LptG AL552_RS13865 PF03739 Lipopolysaccharide export system permease LptF/LptG AL552_RS13870 PF02789 Cytosol aminopeptidase family, N-terminal domain AL552_RS13870 PF00883 Cytosol aminopeptidase family, catalytic domain AL552_RS13875 PF04364 DNA polymerase III chi subunit, HolC AL552_RS13880 PF08264 Anticodon-binding domain of tRNA AL552_RS13880 PF10458 Valyl tRNA synthetase tRNA binding arm AL552_RS13880 PF00133 tRNA synthetases class I (I, L, M and V) AL552_RS13890 PF00583 Acetyltransferase (GNAT) family AL552_RS13900 PF06877 Regulator of ribonuclease activity B AL552_RS13910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL552_RS13910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL552_RS13920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AL552_RS13920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AL552_RS13925 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AL552_RS13925 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AL552_RS13930 PF01042 Endoribonuclease L-PSP AL552_RS13935 PF01553 Acyltransferase AL552_RS13940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AL552_RS13945 PF01722 BolA-like protein AL552_RS13955 PF05494 MlaC protein AL552_RS13960 PF02470 MlaD protein AL552_RS13965 PF02405 Permease MlaE AL552_RS13970 PF00005 ABC transporter AL552_RS13975 PF01699 Sodium/calcium exchanger protein AL552_RS13980 PF00571 CBS domain AL552_RS13980 PF01380 SIS domain AL552_RS13990 PF03968 OstA-like protein AL552_RS13995 PF00005 ABC transporter AL552_RS13995 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL552_RS14000 PF04963 Sigma-54 factor, core binding domain AL552_RS14000 PF00309 Sigma-54 factor, Activator interacting domain (AID) AL552_RS14000 PF04552 Sigma-54, DNA binding domain AL552_RS14005 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AL552_RS14010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL552_RS14015 PF03668 P-loop ATPase protein family AL552_RS14020 PF00381 PTS HPr component phosphorylation site AL552_RS14025 PF00571 CBS domain AL552_RS14025 PF03448 MgtE intracellular N domain AL552_RS14025 PF01769 Divalent cation transporter AL552_RS14030 PF01523 Putative modulator of DNA gyrase AL552_RS14035 PF04751 Protein of unknown function (DUF615) AL552_RS14040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL552_RS14040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL552_RS14045 PF00849 RNA pseudouridylate synthase AL552_RS14055 PF18337 RapA N-terminal Tudor like domain AL552_RS14055 PF18339 RapA N-terminal Tudor like domain 1 AL552_RS14055 PF00176 SNF2 family N-terminal domain AL552_RS14055 PF00271 Helicase conserved C-terminal domain AL552_RS14055 PF12137 RNA polymerase recycling family C-terminal AL552_RS14060 PF13638 PIN domain AL552_RS14060 PF02562 PhoH-like protein AL552_RS14065 PF01523 Putative modulator of DNA gyrase AL552_RS14070 PF00795 Carbon-nitrogen hydrolase AL552_RS14075 PF13502 AsmA-like C-terminal region AL552_RS14075 PF13116 Protein of unknown function AL552_RS14080 PF00575 S1 RNA binding domain AL552_RS14080 PF10150 Ribonuclease E/G family AL552_RS14085 PF02545 Maf-like protein AL552_RS14090 PF04093 rod shape-determining protein MreD AL552_RS14095 PF04085 rod shape-determining protein MreC AL552_RS14135 PF07963 Prokaryotic N-terminal methylation motif AL552_RS14145 PF00482 Type II secretion system (T2SS), protein F AL552_RS14150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AL552_RS14150 PF00437 Type II/IV secretion system protein AL552_RS14160 PF01471 Putative peptidoglycan binding domain AL552_RS14160 PF13401 AAA domain AL552_RS14165 PF00263 Bacterial type II and III secretion system protein AL552_RS14165 PF03958 Bacterial type II/III secretion system short domain AL552_RS14185 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS14185 PF17157 Gammaproteobacterial periplasmic sensor domain AL552_RS14185 PF00563 EAL domain AL552_RS14190 PF00436 Single-strand binding protein family AL552_RS14195 PF00196 Bacterial regulatory proteins, luxR family AL552_RS14200 PF00483 Nucleotidyl transferase AL552_RS14205 PF17760 UvrA interaction domain AL552_RS14205 PF00005 ABC transporter AL552_RS14205 PF17755 UvrA DNA-binding domain AL552_RS14215 PF00266 Aminotransferase class-V AL552_RS14230 PF00696 Amino acid kinase family AL552_RS14230 PF01842 ACT domain AL552_RS14240 PF00999 Sodium/hydrogen exchanger family AL552_RS14305 PF01507 Phosphoadenosine phosphosulfate reductase family AL552_RS14310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL552_RS14310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL552_RS14315 PF00667 FAD binding domain AL552_RS14315 PF00258 Flavodoxin AL552_RS14315 PF00175 Oxidoreductase NAD-binding domain AL552_RS14335 PF01207 Dihydrouridine synthase (Dus) AL552_RS14340 PF01475 Ferric uptake regulator family AL552_RS14350 PF00342 Phosphoglucose isomerase AL552_RS14355 PF01894 Uncharacterised protein family UPF0047 AL552_RS14365 PF00772 DnaB-like helicase N terminal domain AL552_RS14365 PF03796 DnaB-like helicase C terminal domain AL552_RS14375 PF03948 Ribosomal protein L9, C-terminal domain AL552_RS14375 PF01281 Ribosomal protein L9, N-terminal domain AL552_RS14380 PF01084 Ribosomal protein S18 AL552_RS14385 PF00436 Single-strand binding protein family AL552_RS14390 PF01250 Ribosomal protein S6 AL552_RS14395 PF00834 Ribulose-phosphate 3 epimerase family AL552_RS14400 PF02086 D12 class N6 adenine-specific DNA methyltransferase AL552_RS14410 PF01761 3-dehydroquinate synthase AL552_RS14415 PF01202 Shikimate kinase AL552_RS14420 PF00263 Bacterial type II and III secretion system protein AL552_RS14420 PF03958 Bacterial type II/III secretion system short domain AL552_RS14420 PF07660 Secretin and TonB N terminus short domain AL552_RS14420 PF11741 AMIN domain AL552_RS14425 PF04351 Pilus assembly protein, PilP AL552_RS14435 PF05137 Fimbrial assembly protein (PilN) AL552_RS14445 PF17092 Penicillin-binding protein OB-like domain AL552_RS14445 PF00905 Penicillin binding protein transpeptidase domain AL552_RS14445 PF00912 Transglycosylase AL552_RS14450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS14450 PF03466 LysR substrate binding domain AL552_RS14455 PF00462 Glutaredoxin AL552_RS14455 PF08534 Redoxin AL552_RS14460 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS14460 PF00403 Heavy-metal-associated domain AL552_RS14460 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL552_RS14475 PF00583 Acetyltransferase (GNAT) family AL552_RS14475 PF14698 Argininosuccinate lyase C-terminal AL552_RS14475 PF00206 Lyase AL552_RS14480 PF00764 Arginosuccinate synthase AL552_RS14485 PF00696 Amino acid kinase family AL552_RS14490 PF02774 Semialdehyde dehydrogenase, dimerisation domain AL552_RS14490 PF01118 Semialdehyde dehydrogenase, NAD binding domain AL552_RS14495 PF01546 Peptidase family M20/M25/M40 AL552_RS14495 PF07687 Peptidase dimerisation domain AL552_RS14500 PF00311 Phosphoenolpyruvate carboxylase AL552_RS14510 PF02219 Methylenetetrahydrofolate reductase AL552_RS14515 PF00696 Amino acid kinase family AL552_RS14515 PF00742 Homoserine dehydrogenase AL552_RS14515 PF03447 Homoserine dehydrogenase, NAD binding domain AL552_RS14520 PF01053 Cys/Met metabolism PLP-dependent enzyme AL552_RS14530 PF00390 Malic enzyme, N-terminal domain AL552_RS14530 PF03949 Malic enzyme, NAD binding domain AL552_RS14535 PF00210 Ferritin-like domain AL552_RS14540 PF04324 BFD-like [2Fe-2S] binding domain AL552_RS14545 PF03143 Elongation factor Tu C-terminal domain AL552_RS14545 PF00009 Elongation factor Tu GTP binding domain AL552_RS14545 PF03144 Elongation factor Tu domain 2 AL552_RS14550 PF14492 Elongation Factor G, domain II AL552_RS14550 PF00679 Elongation factor G C-terminus AL552_RS14550 PF03764 Elongation factor G, domain IV AL552_RS14550 PF03144 Elongation factor Tu domain 2 AL552_RS14550 PF00009 Elongation factor Tu GTP binding domain AL552_RS14555 PF00177 Ribosomal protein S7p/S5e AL552_RS14560 PF00164 Ribosomal protein S12/S23 AL552_RS14565 PF04077 DsrH like protein AL552_RS14570 PF02635 DsrE/DsrF-like family AL552_RS14575 PF02635 DsrE/DsrF-like family AL552_RS14580 PF13309 HTH domain AL552_RS14580 PF08348 YheO-like PAS domain AL552_RS14585 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL552_RS14585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL552_RS14595 PF04102 SlyX AL552_RS14600 PF01112 Asparaginase AL552_RS14605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL552_RS14615 PF00999 Sodium/hydrogen exchanger family AL552_RS14615 PF02254 TrkA-N domain AL552_RS14620 PF02525 Flavodoxin-like fold AL552_RS14630 PF12848 ABC transporter AL552_RS14630 PF00005 ABC transporter AL552_RS14640 PF00561 alpha/beta hydrolase fold AL552_RS14645 PF06794 Uncharacterised protein family (UPF0270) AL552_RS14650 PF00485 Phosphoribulokinase / Uridine kinase family AL552_RS14655 PF13545 Crp-like helix-turn-helix domain AL552_RS14655 PF00027 Cyclic nucleotide-binding domain AL552_RS14665 PF00171 Aldehyde dehydrogenase family AL552_RS14670 PF04958 Arginine N-succinyltransferase beta subunit AL552_RS14675 PF00202 Aminotransferase class-III AL552_RS14680 PF00117 Glutamine amidotransferase class-I AL552_RS14695 PF00579 tRNA synthetases class I (W and Y) AL552_RS14700 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS14705 PF00588 SpoU rRNA Methylase family AL552_RS14705 PF08032 RNA 2'-O ribose methyltransferase substrate binding AL552_RS14710 PF00575 S1 RNA binding domain AL552_RS14710 PF00773 RNB domain AL552_RS14710 PF08206 Ribonuclease B OB domain AL552_RS14710 PF08461 Ribonuclease R winged-helix domain AL552_RS14710 PF17876 Cold shock domain AL552_RS14715 PF02082 Transcriptional regulator AL552_RS14720 PF00175 Oxidoreductase NAD-binding domain AL552_RS14720 PF00042 Globin AL552_RS14720 PF00970 Oxidoreductase FAD-binding domain AL552_RS14725 PF08238 Sel1 repeat AL552_RS14735 PF00709 Adenylosuccinate synthetase AL552_RS14740 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AL552_RS14745 PF01145 SPFH domain / Band 7 family AL552_RS14750 PF12221 Bacterial membrane protein N terminal AL552_RS14750 PF01145 SPFH domain / Band 7 family AL552_RS14755 PF13167 GTP-binding GTPase N-terminal AL552_RS14755 PF01926 50S ribosome-binding GTPase AL552_RS14755 PF16360 GTP-binding GTPase Middle Region AL552_RS14760 PF17209 Hfq protein AL552_RS14770 PF01119 DNA mismatch repair protein, C-terminal domain AL552_RS14770 PF08676 MutL C terminal dimerisation domain AL552_RS14775 PF01520 N-acetylmuramoyl-L-alanine amidase AL552_RS14780 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AL552_RS14790 PF08331 Domain of unknown function (DUF1730) AL552_RS14855 PF00929 Exonuclease AL552_RS14860 PF03193 RsgA GTPase AL552_RS14865 PF02666 Phosphatidylserine decarboxylase AL552_RS14870 PF00939 Sodium:sulfate symporter transmembrane region AL552_RS14880 PF01676 Metalloenzyme superfamily AL552_RS14880 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AL552_RS14885 PF00581 Rhodanese-like domain AL552_RS14890 PF02556 Preprotein translocase subunit SecB AL552_RS14895 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AL552_RS14895 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AL552_RS14900 PF06426 Serine acetyltransferase, N-terminal AL552_RS14900 PF00132 Bacterial transferase hexapeptide (six repeats) AL552_RS14905 PF01551 Peptidase family M23 AL552_RS14915 PF08360 QacR-like protein, C-terminal region AL552_RS14915 PF00440 Bacterial regulatory proteins, tetR family AL552_RS14925 PF00152 tRNA synthetases class II (D, K and N) AL552_RS14930 PF02910 Fumarate reductase flavoprotein C-term AL552_RS14930 PF00890 FAD binding domain AL552_RS14935 PF13183 4Fe-4S dicluster domain AL552_RS14935 PF13085 2Fe-2S iron-sulfur cluster binding domain AL552_RS14940 PF02300 Fumarate reductase subunit C AL552_RS14945 PF02313 Fumarate reductase subunit D AL552_RS14955 PF01132 Elongation factor P (EF-P) OB domain AL552_RS14955 PF09285 Elongation factor P, C-terminal AL552_RS14955 PF08207 Elongation factor P (EF-P) KOW-like domain AL552_RS14960 PF04055 Radical SAM superfamily AL552_RS14965 PF02308 MgtC family AL552_RS14975 PF00118 TCP-1/cpn60 chaperonin family AL552_RS14980 PF00166 Chaperonin 10 Kd subunit AL552_RS14985 PF01554 MatE AL552_RS14990 PF00365 Phosphofructokinase AL552_RS14995 PF01545 Cation efflux family AL552_RS14995 PF16916 Dimerisation domain of Zinc Transporter AL552_RS15000 PF07813 LTXXQ motif family protein AL552_RS15005 PF00486 Transcriptional regulatory protein, C terminal AL552_RS15005 PF00072 Response regulator receiver domain AL552_RS15010 PF16527 Two-component sensor protein CpxA, periplasmic domain AL552_RS15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS15010 PF00672 HAMP domain AL552_RS15010 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS15015 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AL552_RS15015 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AL552_RS15020 PF00588 SpoU rRNA Methylase family AL552_RS15025 PF04186 FxsA cytoplasmic membrane protein AL552_RS15030 PF10415 Fumarase C C-terminus AL552_RS15030 PF00206 Lyase AL552_RS15035 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL552_RS15040 PF11412 Disulphide bond corrector protein DsbC AL552_RS15040 PF02683 Cytochrome C biogenesis protein transmembrane region AL552_RS15045 PF00072 Response regulator receiver domain AL552_RS15045 PF00196 Bacterial regulatory proteins, luxR family AL552_RS15050 PF03471 Transporter associated domain AL552_RS15050 PF02080 TrkA-C domain AL552_RS15050 PF00999 Sodium/hydrogen exchanger family AL552_RS15060 PF00474 Sodium:solute symporter family AL552_RS15075 PF10415 Fumarase C C-terminus AL552_RS15075 PF00206 Lyase AL552_RS15080 PF09308 LuxQ, periplasmic AL552_RS15080 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS15080 PF00072 Response regulator receiver domain AL552_RS15085 PF12832 MFS_1 like family AL552_RS15100 PF00501 AMP-binding enzyme AL552_RS15100 PF16177 Acetyl-coenzyme A synthetase N-terminus AL552_RS15100 PF13193 AMP-binding enzyme C-terminal domain AL552_RS15105 PF01220 Dehydroquinase class II AL552_RS15110 PF00364 Biotin-requiring enzyme AL552_RS15115 PF00289 Biotin carboxylase, N-terminal domain AL552_RS15115 PF02785 Biotin carboxylase C-terminal domain AL552_RS15115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL552_RS15130 PF01207 Dihydrouridine synthase (Dus) AL552_RS15135 PF02954 Bacterial regulatory protein, Fis family AL552_RS15145 PF00005 ABC transporter AL552_RS15145 PF12848 ABC transporter AL552_RS15205 PF01276 Orn/Lys/Arg decarboxylase, major domain AL552_RS15205 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL552_RS15205 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL552_RS15210 PF13520 Amino acid permease AL552_RS15220 PF00486 Transcriptional regulatory protein, C terminal AL552_RS15220 PF18500 CadC C-terminal domain 1 AL552_RS15225 PF13411 MerR HTH family regulatory protein AL552_RS15235 PF02142 MGS-like domain AL552_RS15235 PF01808 AICARFT/IMPCHase bienzyme AL552_RS15245 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AL552_RS15245 PF02843 Phosphoribosylglycinamide synthetase, C domain AL552_RS15245 PF02844 Phosphoribosylglycinamide synthetase, N domain AL552_RS15255 PF00216 Bacterial DNA-binding protein AL552_RS15260 PF00571 CBS domain AL552_RS15260 PF01595 Cyclin M transmembrane N-terminal domain AL552_RS15265 PF04222 Protein of unknown function (DUF416) AL552_RS15270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL552_RS15275 PF03167 Uracil DNA glycosylase superfamily AL552_RS15280 PF01208 Uroporphyrinogen decarboxylase (URO-D) AL552_RS15285 PF00293 NUDIX domain AL552_RS15285 PF09297 NADH pyrophosphatase zinc ribbon domain AL552_RS15290 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AL552_RS15295 PF04998 RNA polymerase Rpb1, domain 5 AL552_RS15295 PF05000 RNA polymerase Rpb1, domain 4 AL552_RS15295 PF04983 RNA polymerase Rpb1, domain 3 AL552_RS15295 PF00623 RNA polymerase Rpb1, domain 2 AL552_RS15295 PF04997 RNA polymerase Rpb1, domain 1 AL552_RS15300 PF04560 RNA polymerase Rpb2, domain 7 AL552_RS15300 PF00562 RNA polymerase Rpb2, domain 6 AL552_RS15300 PF10385 RNA polymerase beta subunit external 1 domain AL552_RS15300 PF04565 RNA polymerase Rpb2, domain 3 AL552_RS15300 PF04561 RNA polymerase Rpb2, domain 2 AL552_RS15300 PF04563 RNA polymerase beta subunit AL552_RS15305 PF00542 Ribosomal protein L7/L12 C-terminal domain AL552_RS15305 PF16320 Ribosomal protein L7/L12 dimerisation domain AL552_RS15310 PF00466 Ribosomal protein L10 AL552_RS15315 PF00687 Ribosomal protein L1p/L10e family AL552_RS15320 PF00298 Ribosomal protein L11, RNA binding domain AL552_RS15320 PF03946 Ribosomal protein L11, N-terminal domain AL552_RS15325 PF00467 KOW motif AL552_RS15325 PF02357 Transcription termination factor nusG AL552_RS15330 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AL552_RS15340 PF03143 Elongation factor Tu C-terminal domain AL552_RS15340 PF03144 Elongation factor Tu domain 2 AL552_RS15340 PF00009 Elongation factor Tu GTP binding domain AL552_RS15370 PF08279 HTH domain AL552_RS15370 PF03099 Biotin/lipoate A/B protein ligase family AL552_RS15370 PF02237 Biotin protein ligase C terminal domain AL552_RS15375 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AL552_RS15375 PF01565 FAD binding domain AL552_RS15385 PF13091 PLD-like domain AL552_RS15450 PF01177 Asp/Glu/Hydantoin racemase AL552_RS15460 PF07715 TonB-dependent Receptor Plug Domain AL552_RS15460 PF00593 TonB dependent receptor AL552_RS15465 PF05958 tRNA (Uracil-5-)-methyltransferase AL552_RS15505 PF04002 RadC-like JAB domain AL552_RS15510 PF18766 SWI2/SNF2 ATPase AL552_RS15510 PF11867 Domain of unknown function (DUF3387) AL552_RS15510 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AL552_RS15520 PF01420 Type I restriction modification DNA specificity domain AL552_RS15525 PF02384 N-6 DNA Methylase AL552_RS15545 PF13185 GAF domain AL552_RS15545 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS15545 PF00563 EAL domain AL552_RS15550 PF04976 DMSO reductase anchor subunit (DmsC) AL552_RS15555 PF13247 4Fe-4S dicluster domain AL552_RS15555 PF12800 4Fe-4S binding domain AL552_RS15560 PF00384 Molybdopterin oxidoreductase AL552_RS15560 PF01568 Molydopterin dinucleotide binding domain AL552_RS15560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS15565 PF02613 Nitrate reductase delta subunit AL552_RS15570 PF00037 4Fe-4S binding domain AL552_RS15570 PF12838 4Fe-4S dicluster domain AL552_RS15575 PF00563 EAL domain AL552_RS15575 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS15575 PF08447 PAS fold AL552_RS15575 PF08448 PAS fold AL552_RS15590 PF00440 Bacterial regulatory proteins, tetR family AL552_RS15595 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS15595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL552_RS15600 PF01554 MatE AL552_RS15605 PF04072 Leucine carboxyl methyltransferase AL552_RS15615 PF00717 Peptidase S24-like AL552_RS15615 PF01726 LexA DNA binding domain AL552_RS15625 PF01553 Acyltransferase AL552_RS15630 PF01040 UbiA prenyltransferase family AL552_RS15635 PF04345 Chorismate lyase AL552_RS15640 PF03748 Flagellar basal body-associated protein FliL AL552_RS15645 PF01694 Rhomboid family AL552_RS15645 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AL552_RS15650 PF00581 Rhodanese-like domain AL552_RS15655 PF00140 Sigma-70 factor, region 1.2 AL552_RS15655 PF04542 Sigma-70 region 2 AL552_RS15655 PF04545 Sigma-70, region 4 AL552_RS15660 PF18075 FtsX extracellular domain AL552_RS15665 PF00005 ABC transporter AL552_RS15670 PF02881 SRP54-type protein, helical bundle domain AL552_RS15670 PF00448 SRP54-type protein, GTPase domain AL552_RS15685 PF01914 MarC family integral membrane protein AL552_RS15715 PF10694 Protein of unknown function (DUF2500) AL552_RS15735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_RS15735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL552_RS15740 PF01022 Bacterial regulatory protein, arsR family AL552_RS15745 PF00563 EAL domain AL552_RS15745 PF08668 HDOD domain AL552_RS15750 PF01810 LysE type translocator AL552_RS15755 PF12146 Serine aminopeptidase, S33 AL552_RS15775 PF03942 DTW domain AL552_RS15780 PF00563 EAL domain AL552_RS15780 PF08495 FIST N domain AL552_RS15780 PF10442 FIST C domain AL552_RS15780 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS15785 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS15790 PF02899 Phage integrase, N-terminal SAM-like domain AL552_RS15790 PF00589 Phage integrase family AL552_RS15800 PF01678 Diaminopimelate epimerase AL552_RS15805 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL552_RS15805 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL552_RS15815 PF01491 Frataxin-like domain AL552_RS15820 PF12633 Adenylate cyclase NT domain AL552_RS15820 PF01295 Adenylate cyclase, class-I AL552_RS15825 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AL552_RS15825 PF03900 Porphobilinogen deaminase, C-terminal domain AL552_RS15830 PF02602 Uroporphyrinogen-III synthase HemD AL552_RS15835 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AL552_RS15840 PF07219 HemY protein N-terminus AL552_RS15880 PF00175 Oxidoreductase NAD-binding domain AL552_RS15885 PF00111 2Fe-2S iron-sulfur cluster binding domain AL552_RS15890 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AL552_RS15905 PF07498 Rho termination factor, N-terminal domain AL552_RS15905 PF07497 Rho termination factor, RNA-binding domain AL552_RS15905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL552_RS15910 PF00085 Thioredoxin AL552_RS15915 PF00271 Helicase conserved C-terminal domain AL552_RS15915 PF00270 DEAD/DEAH box helicase AL552_RS15920 PF02541 Ppx/GppA phosphatase family AL552_RS15925 PF02592 Putative vitamin uptake transporter AL552_RS15935 PF09382 RQC domain AL552_RS15935 PF16124 RecQ zinc-binding AL552_RS15935 PF00270 DEAD/DEAH box helicase AL552_RS15935 PF00570 HRDC domain AL552_RS15935 PF00271 Helicase conserved C-terminal domain AL552_RS15940 PF00892 EamA-like transporter family AL552_RS15965 PF00580 UvrD/REP helicase N-terminal domain AL552_RS15965 PF13361 UvrD-like helicase C-terminal domain AL552_RS15975 PF05114 Protein of unknown function (DUF692) AL552_RS15995 PF07690 Major Facilitator Superfamily AL552_RS16000 PF03466 LysR substrate binding domain AL552_RS16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS16005 PF00557 Metallopeptidase family M24 AL552_RS16005 PF01321 Creatinase/Prolidase N-terminal domain AL552_RS16005 PF01321 Creatinase/Prolidase N-terminal domain AL552_RS16005 PF00557 Metallopeptidase family M24 AL552_RS16010 PF06968 Biotin and Thiamin Synthesis associated domain AL552_RS16010 PF04055 Radical SAM superfamily AL552_RS16015 PF05690 Thiazole biosynthesis protein ThiG AL552_RS16020 PF02597 ThiS family AL552_RS16025 PF00899 ThiF family AL552_RS16030 PF02581 Thiamine monophosphate synthase AL552_RS16035 PF01964 Radical SAM ThiC family AL552_RS16035 PF13667 ThiC-associated domain AL552_RS16040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AL552_RS16045 PF07732 Multicopper oxidase AL552_RS16045 PF07731 Multicopper oxidase AL552_RS16045 PF00394 Multicopper oxidase AL552_RS16095 PF12724 Flavodoxin domain AL552_RS16100 PF02386 Cation transport protein AL552_RS16105 PF01205 Uncharacterized protein family UPF0029 AL552_RS16105 PF09186 Domain of unknown function (DUF1949) AL552_RS16110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AL552_RS16110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AL552_RS16110 PF00378 Enoyl-CoA hydratase/isomerase AL552_RS16115 PF02803 Thiolase, C-terminal domain AL552_RS16115 PF00108 Thiolase, N-terminal domain AL552_RS16120 PF00107 Zinc-binding dehydrogenase AL552_RS16120 PF08240 Alcohol dehydrogenase GroES-like domain AL552_RS16125 PF03466 LysR substrate binding domain AL552_RS16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS16135 PF01206 Sulfurtransferase TusA AL552_RS16145 PF01169 Uncharacterized protein family UPF0016 AL552_RS16150 PF02091 Glycyl-tRNA synthetase alpha subunit AL552_RS16155 PF05746 DALR anticodon binding domain AL552_RS16155 PF02092 Glycyl-tRNA synthetase beta subunit AL552_RS16160 PF00128 Alpha amylase, catalytic domain AL552_RS16165 PF00155 Aminotransferase class I and II AL552_RS16170 PF00011 Hsp20/alpha crystallin family AL552_RS16185 PF18053 DNA gyrase B subunit insert domain AL552_RS16185 PF00204 DNA gyrase B AL552_RS16185 PF00986 DNA gyrase B subunit, carboxyl terminus AL552_RS16185 PF01751 Toprim domain AL552_RS16185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS16190 PF02463 RecF/RecN/SMC N terminal domain AL552_RS16195 PF00712 DNA polymerase III beta subunit, N-terminal domain AL552_RS16195 PF02768 DNA polymerase III beta subunit, C-terminal domain AL552_RS16195 PF02767 DNA polymerase III beta subunit, central domain AL552_RS16200 PF11638 DnaA N-terminal domain AL552_RS16200 PF00308 Bacterial dnaA protein AL552_RS16200 PF08299 Bacterial dnaA protein helix-turn-helix AL552_RS16210 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS16215 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS16220 PF00005 ABC transporter AL552_RS16225 PF00468 Ribosomal protein L34 AL552_RS16230 PF00825 Ribonuclease P AL552_RS16235 PF01809 Putative membrane protein insertion efficiency factor AL552_RS16240 PF14849 YidC periplasmic domain AL552_RS16240 PF02096 60Kd inner membrane protein AL552_RS16245 PF01926 50S ribosome-binding GTPase AL552_RS16245 PF12631 MnmE helical domain AL552_RS16245 PF10396 GTP-binding protein TrmE N-terminus AL552_RS16250 PF02899 Phage integrase, N-terminal SAM-like domain AL552_RS16250 PF00589 Phage integrase family AL552_RS16355 PF00258 Flavodoxin AL552_RS16360 PF01134 Glucose inhibited division protein A AL552_RS16360 PF13932 GidA associated domain AL552_RS16365 PF02527 rRNA small subunit methyltransferase G AL552_RS16370 PF13614 AAA domain AL552_RS16375 PF02195 ParB-like nuclease domain AL552_RS16375 PF17762 HTH domain found in ParB protein AL552_RS16380 PF03899 ATP synthase I chain AL552_RS16385 PF00119 ATP synthase A chain AL552_RS16390 PF00137 ATP synthase subunit C AL552_RS16395 PF00430 ATP synthase B/B' CF(0) AL552_RS16405 PF00306 ATP synthase alpha/beta chain, C terminal domain AL552_RS16405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL552_RS16405 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL552_RS16410 PF00231 ATP synthase AL552_RS16415 PF02874 ATP synthase alpha/beta family, beta-barrel domain AL552_RS16415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AL552_RS16420 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AL552_RS16420 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AL552_RS16425 PF00132 Bacterial transferase hexapeptide (six repeats) AL552_RS16425 PF12804 MobA-like NTP transferase domain AL552_RS16430 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS16435 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS16440 PF07690 Major Facilitator Superfamily AL552_RS16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS16445 PF03466 LysR substrate binding domain AL552_RS16450 PF00291 Pyridoxal-phosphate dependent enzyme AL552_RS16450 PF00585 C-terminal regulatory domain of Threonine dehydratase AL552_RS16455 PF00920 Dehydratase family AL552_RS16460 PF01063 Amino-transferase class IV AL552_RS16470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL552_RS16470 PF00205 Thiamine pyrophosphate enzyme, central domain AL552_RS16470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL552_RS16475 PF01078 Magnesium chelatase, subunit ChlI AL552_RS16475 PF13335 Magnesium chelatase, subunit ChlI C-terminal AL552_RS16485 PF01553 Acyltransferase AL552_RS16490 PF01323 DSBA-like thioredoxin domain AL552_RS16495 PF01636 Phosphotransferase enzyme family AL552_RS16500 PF12801 4Fe-4S binding domain AL552_RS16500 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AL552_RS16500 PF13746 4Fe-4S dicluster domain AL552_RS16505 PF06288 Protein of unknown function (DUF1040) AL552_RS16515 PF07070 SpoOM protein AL552_RS16520 PF03006 Haemolysin-III related AL552_RS16530 PF02386 Cation transport protein AL552_RS16535 PF02254 TrkA-N domain AL552_RS16535 PF02080 TrkA-C domain AL552_RS16540 PF01189 16S rRNA methyltransferase RsmB/F AL552_RS16540 PF01029 NusB family AL552_RS16545 PF02911 Formyl transferase, C-terminal domain AL552_RS16545 PF00551 Formyl transferase AL552_RS16550 PF01327 Polypeptide deformylase AL552_RS16560 PF17782 DprA winged helix domain AL552_RS16560 PF02481 DNA recombination-mediator protein A AL552_RS16565 PF04361 Protein of unknown function (DUF494) AL552_RS16570 PF01396 Topoisomerase DNA binding C4 zinc finger AL552_RS16575 PF02222 ATP-grasp domain AL552_RS16575 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AL552_RS16580 PF00731 AIR carboxylase AL552_RS16585 PF01300 Telomere recombination AL552_RS16590 PF01218 Coproporphyrinogen III oxidase AL552_RS16595 PF01488 Shikimate / quinate 5-dehydrogenase AL552_RS16595 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AL552_RS16595 PF08501 Shikimate dehydrogenase substrate binding domain AL552_RS16600 PF07369 Protein of unknown function (DUF1488) AL552_RS16605 PF00132 Bacterial transferase hexapeptide (six repeats) AL552_RS16645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS16645 PF03466 LysR substrate binding domain AL552_RS16650 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AL552_RS16650 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AL552_RS16655 PF04380 Membrane fusogenic activity AL552_RS16660 PF00873 AcrB/AcrD/AcrF family AL552_RS16665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS16670 PF16295 Tetracyclin repressor-like, C-terminal domain AL552_RS16670 PF00440 Bacterial regulatory proteins, tetR family AL552_RS16680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AL552_RS16710 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS16720 PF00005 ABC transporter AL552_RS16720 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS16725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL552_RS16730 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS16735 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS16735 PF12911 N-terminal TM domain of oligopeptide transport permease C AL552_RS16780 PF00356 Bacterial regulatory proteins, lacI family AL552_RS16780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL552_RS16785 PF03466 LysR substrate binding domain AL552_RS16785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS16790 PF00893 Small Multidrug Resistance protein AL552_RS16795 PF00893 Small Multidrug Resistance protein AL552_RS16800 PF00920 Dehydratase family AL552_RS16805 PF01202 Shikimate kinase AL552_RS16810 PF02447 GntP family permease AL552_RS16815 PF01081 KDPG and KHG aldolase AL552_RS16820 PF01048 Phosphorylase superfamily AL552_RS16825 PF03466 LysR substrate binding domain AL552_RS16825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS16830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL552_RS16830 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS16835 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AL552_RS16840 PF01432 Peptidase family M3 AL552_RS16845 PF01037 Lrp/AsnC ligand binding domain AL552_RS16850 PF00563 EAL domain AL552_RS16850 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS16850 PF08448 PAS fold AL552_RS16855 PF04445 Putative SAM-dependent methyltransferase AL552_RS16865 PF00892 EamA-like transporter family AL552_RS16870 PF00582 Universal stress protein family AL552_RS16875 PF00210 Ferritin-like domain AL552_RS16880 PF10625 Universal stress protein B (UspB) AL552_RS16890 PF00158 Sigma-54 interaction domain AL552_RS16890 PF02954 Bacterial regulatory protein, Fis family AL552_RS16890 PF01590 GAF domain AL552_RS16915 PF00781 Diacylglycerol kinase catalytic domain AL552_RS16945 PF01594 AI-2E family transporter AL552_RS16950 PF03707 Bacterial signalling protein N terminal repeat AL552_RS16950 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS16950 PF00563 EAL domain AL552_RS16960 PF02646 RmuC family AL552_RS16965 PF01209 ubiE/COQ5 methyltransferase family AL552_RS16970 PF02036 SCP-2 sterol transfer family AL552_RS16975 PF03109 ABC1 family AL552_RS16980 PF02416 mttA/Hcf106 family AL552_RS16985 PF02416 mttA/Hcf106 family AL552_RS16990 PF00902 Sec-independent protein translocase protein (TatC) AL552_RS17000 PF01026 TatD related DNase AL552_RS17010 PF00490 Delta-aminolevulinic acid dehydratase AL552_RS17015 PF00583 Acetyltransferase (GNAT) family AL552_RS17025 PF01612 3'-5' exonuclease AL552_RS17025 PF00476 DNA polymerase family A AL552_RS17025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AL552_RS17025 PF01367 5'-3' exonuclease, C-terminal SAM fold AL552_RS17035 PF01926 50S ribosome-binding GTPase AL552_RS17040 PF00034 Cytochrome c AL552_RS17055 PF04220 Der GTPase activator (YihI) AL552_RS17060 PF10675 Protein of unknown function (DUF2489) AL552_RS17065 PF04055 Radical SAM superfamily AL552_RS17065 PF06969 HemN C-terminal domain AL552_RS17070 PF00962 Adenosine/AMP deaminase AL552_RS17075 PF03707 Bacterial signalling protein N terminal repeat AL552_RS17075 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS17075 PF00563 EAL domain AL552_RS17080 PF02954 Bacterial regulatory protein, Fis family AL552_RS17080 PF00158 Sigma-54 interaction domain AL552_RS17080 PF00072 Response regulator receiver domain AL552_RS17085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS17085 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS17085 PF00989 PAS fold AL552_RS17095 PF03951 Glutamine synthetase, beta-Grasp domain AL552_RS17095 PF00120 Glutamine synthetase, catalytic domain AL552_RS17100 PF03144 Elongation factor Tu domain 2 AL552_RS17100 PF00679 Elongation factor G C-terminus AL552_RS17100 PF00009 Elongation factor Tu GTP binding domain AL552_RS17120 PF00171 Aldehyde dehydrogenase family AL552_RS17135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL552_RS17135 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS17145 PF01040 UbiA prenyltransferase family AL552_RS17155 PF00510 Cytochrome c oxidase subunit III AL552_RS17160 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL552_RS17165 PF06481 COX Aromatic Rich Motif AL552_RS17165 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL552_RS17175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL552_RS17175 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL552_RS17180 PF00378 Enoyl-CoA hydratase/isomerase AL552_RS17185 PF00378 Enoyl-CoA hydratase/isomerase AL552_RS17190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL552_RS17190 PF02770 Acyl-CoA dehydrogenase, middle domain AL552_RS17190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL552_RS17195 PF00171 Aldehyde dehydrogenase family AL552_RS17200 PF02803 Thiolase, C-terminal domain AL552_RS17200 PF00108 Thiolase, N-terminal domain AL552_RS17205 PF09278 MerR, DNA binding AL552_RS17205 PF00376 MerR family regulatory protein AL552_RS17210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL552_RS17210 PF02770 Acyl-CoA dehydrogenase, middle domain AL552_RS17210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL552_RS17215 PF01039 Carboxyl transferase domain AL552_RS17220 PF00378 Enoyl-CoA hydratase/isomerase AL552_RS17225 PF00682 HMGL-like AL552_RS17230 PF10063 Uncharacterized integral membrane protein (DUF2301) AL552_RS17240 PF13183 4Fe-4S dicluster domain AL552_RS17240 PF02913 FAD linked oxidases, C-terminal domain AL552_RS17240 PF01565 FAD binding domain AL552_RS17245 PF04909 Amidohydrolase AL552_RS17250 PF00561 alpha/beta hydrolase fold AL552_RS17255 PF01965 DJ-1/PfpI family AL552_RS17255 PF12833 Helix-turn-helix domain AL552_RS17265 PF00795 Carbon-nitrogen hydrolase AL552_RS17270 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL552_RS17275 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS17280 PF00005 ABC transporter AL552_RS17280 PF00571 CBS domain AL552_RS17290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS17290 PF08447 PAS fold AL552_RS17290 PF13426 PAS domain AL552_RS17295 PF00871 Acetokinase family AL552_RS17305 PF00563 EAL domain AL552_RS17305 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS17305 PF03707 Bacterial signalling protein N terminal repeat AL552_RS17310 PF00270 DEAD/DEAH box helicase AL552_RS17310 PF00271 Helicase conserved C-terminal domain AL552_RS17310 PF03880 DbpA RNA binding domain AL552_RS17315 PF08206 Ribonuclease B OB domain AL552_RS17315 PF00773 RNB domain AL552_RS17315 PF00575 S1 RNA binding domain AL552_RS17320 PF12833 Helix-turn-helix domain AL552_RS17330 PF12849 PBP superfamily domain AL552_RS17335 PF01575 MaoC like domain AL552_RS17355 PF00589 Phage integrase family AL552_RS17355 PF12167 Arm DNA-binding domain AL552_RS17395 PF08447 PAS fold AL552_RS17395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS17400 PF00005 ABC transporter AL552_RS17405 PF00563 EAL domain AL552_RS17405 PF12792 CSS motif domain associated with EAL AL552_RS17425 PF00270 DEAD/DEAH box helicase AL552_RS17425 PF00271 Helicase conserved C-terminal domain AL552_RS17430 PF02492 CobW/HypB/UreG, nucleotide-binding domain AL552_RS17430 PF07683 Cobalamin synthesis protein cobW C-terminal domain AL552_RS17440 PF01470 Pyroglutamyl peptidase AL552_RS17450 PF00313 'Cold-shock' DNA-binding domain AL552_RS17455 PF17876 Cold shock domain AL552_RS17455 PF08206 Ribonuclease B OB domain AL552_RS17455 PF00773 RNB domain AL552_RS17455 PF00575 S1 RNA binding domain AL552_RS17455 PF08461 Ribonuclease R winged-helix domain AL552_RS17460 PF00291 Pyridoxal-phosphate dependent enzyme AL552_RS17470 PF09905 DNA-binding protein VF530 AL552_RS17475 PF00270 DEAD/DEAH box helicase AL552_RS17475 PF00271 Helicase conserved C-terminal domain AL552_RS17485 PF01925 Sulfite exporter TauE/SafE AL552_RS17515 PF00107 Zinc-binding dehydrogenase AL552_RS17515 PF08240 Alcohol dehydrogenase GroES-like domain AL552_RS17535 PF03466 LysR substrate binding domain AL552_RS17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS17555 PF12852 Cupin AL552_RS17555 PF12833 Helix-turn-helix domain AL552_RS17560 PF12706 Beta-lactamase superfamily domain AL552_RS17570 PF00005 ABC transporter AL552_RS17575 PF01032 FecCD transport family AL552_RS17625 PF05922 Peptidase inhibitor I9 AL552_RS17625 PF00082 Subtilase family AL552_RS17625 PF04151 Bacterial pre-peptidase C-terminal domain AL552_RS17645 PF12843 Putative quorum-sensing-regulated virulence factor AL552_RS17665 PF01329 Pterin 4 alpha carbinolamine dehydratase AL552_RS17670 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AL552_RS17675 PF13193 AMP-binding enzyme C-terminal domain AL552_RS17675 PF00501 AMP-binding enzyme AL552_RS17685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS17685 PF03466 LysR substrate binding domain AL552_RS17695 PF00892 EamA-like transporter family AL552_RS17705 PF00465 Iron-containing alcohol dehydrogenase AL552_RS17710 PF07995 Glucose / Sorbosone dehydrogenase AL552_RS17720 PF00210 Ferritin-like domain AL552_RS17725 PF17200 Single Cache domain 2 AL552_RS17725 PF00672 HAMP domain AL552_RS17725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS17735 PF00005 ABC transporter AL552_RS17735 PF02687 FtsX-like permease family AL552_RS17735 PF12704 MacB-like periplasmic core domain AL552_RS17755 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS17760 PF03889 Alternative ribosome-rescue factor A AL552_RS17765 PF00313 'Cold-shock' DNA-binding domain AL552_RS17785 PF00691 OmpA family AL552_RS17785 PF13488 Glycine zipper AL552_RS17795 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AL552_RS17795 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AL552_RS17800 PF01040 UbiA prenyltransferase family AL552_RS17805 PF02628 Cytochrome oxidase assembly protein AL552_RS17825 PF00510 Cytochrome c oxidase subunit III AL552_RS17830 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AL552_RS17835 PF00115 Cytochrome C and Quinol oxidase polypeptide I AL552_RS17840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AL552_RS17840 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AL552_RS17845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AL552_RS17845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AL552_RS17845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AL552_RS17845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AL552_RS17855 PF01810 LysE type translocator AL552_RS17860 PF12833 Helix-turn-helix domain AL552_RS17875 PF01557 Fumarylacetoacetate (FAA) hydrolase family AL552_RS17890 PF00892 EamA-like transporter family AL552_RS17895 PF00462 Glutaredoxin AL552_RS17910 PF07690 Major Facilitator Superfamily AL552_RS17915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS17915 PF03466 LysR substrate binding domain AL552_RS17920 PF00563 EAL domain AL552_RS17920 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS17920 PF08447 PAS fold AL552_RS17920 PF08448 PAS fold AL552_RS17925 PF01551 Peptidase family M23 AL552_RS17925 PF08525 Opacity-associated protein A N-terminal motif AL552_RS17925 PF01476 LysM domain AL552_RS17955 PF07670 Nucleoside recognition AL552_RS17960 PF02743 Cache domain AL552_RS17960 PF00672 HAMP domain AL552_RS17960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS17970 PF03222 Tryptophan/tyrosine permease family AL552_RS18005 PF00107 Zinc-binding dehydrogenase AL552_RS18005 PF08240 Alcohol dehydrogenase GroES-like domain AL552_RS18010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL552_RS18010 PF02378 Phosphotransferase system, EIIC AL552_RS18015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL552_RS18035 PF01758 Sodium Bile acid symporter family AL552_RS18045 PF01161 Phosphatidylethanolamine-binding protein AL552_RS18050 PF02567 Phenazine biosynthesis-like protein AL552_RS18055 PF10282 Lactonase, 7-bladed beta-propeller AL552_RS18065 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS18065 PF00672 HAMP domain AL552_RS18075 PF00005 ABC transporter AL552_RS18095 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS18095 PF00384 Molybdopterin oxidoreductase AL552_RS18095 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL552_RS18095 PF01568 Molydopterin dinucleotide binding domain AL552_RS18095 PF12838 4Fe-4S dicluster domain AL552_RS18120 PF00873 AcrB/AcrD/AcrF family AL552_RS18140 PF17151 Periplasmic sensor domain AL552_RS18140 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS18150 PF13302 Acetyltransferase (GNAT) domain AL552_RS18160 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL552_RS18165 PF00873 AcrB/AcrD/AcrF family AL552_RS18170 PF13533 Biotin-lipoyl like AL552_RS18180 PF00326 Prolyl oligopeptidase family AL552_RS18180 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL552_RS18185 PF00005 ABC transporter AL552_RS18185 PF16326 ABC transporter C-terminal domain AL552_RS18185 PF12848 ABC transporter AL552_RS18190 PF00582 Universal stress protein family AL552_RS18195 PF02525 Flavodoxin-like fold AL552_RS18200 PF02254 TrkA-N domain AL552_RS18200 PF00999 Sodium/hydrogen exchanger family AL552_RS18215 PF00128 Alpha amylase, catalytic domain AL552_RS18220 PF13411 MerR HTH family regulatory protein AL552_RS18225 PF02627 Carboxymuconolactone decarboxylase family AL552_RS18235 PF04151 Bacterial pre-peptidase C-terminal domain AL552_RS18235 PF08453 Peptidase family M9 N-terminal AL552_RS18235 PF01752 Collagenase AL552_RS18250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS18250 PF03466 LysR substrate binding domain AL552_RS18255 PF00672 HAMP domain AL552_RS18255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS18255 PF02743 Cache domain AL552_RS18265 PF03824 High-affinity nickel-transport protein AL552_RS18270 PF02583 Metal-sensitive transcriptional repressor AL552_RS18290 PF00072 Response regulator receiver domain AL552_RS18290 PF01584 CheW-like domain AL552_RS18300 PF01243 Pyridoxamine 5'-phosphate oxidase AL552_RS18305 PF06228 Haem utilisation ChuX/HutX AL552_RS18315 PF03544 Gram-negative bacterial TonB protein C-terminal AL552_RS18320 PF01618 MotA/TolQ/ExbB proton channel family AL552_RS18325 PF02472 Biopolymer transport protein ExbD/TolR AL552_RS18335 PF01032 FecCD transport family AL552_RS18340 PF00005 ABC transporter AL552_RS18385 PF01467 Cytidylyltransferase-like AL552_RS18390 PF02540 NAD synthase AL552_RS18400 PF01679 Proteolipid membrane potential modulator AL552_RS18410 PF01979 Amidohydrolase family AL552_RS18415 PF05661 Protein of unknown function (DUF808) AL552_RS18445 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS18450 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS18450 PF14785 Maltose transport system permease protein MalF P2 domain AL552_RS18455 PF01547 Bacterial extracellular solute-binding protein AL552_RS18460 PF08402 TOBE domain AL552_RS18460 PF00005 ABC transporter AL552_RS18480 PF02706 Chain length determinant protein AL552_RS18480 PF13807 G-rich domain on putative tyrosine kinase AL552_RS18480 PF13614 AAA domain AL552_RS18490 PF13439 Glycosyltransferase Family 4 AL552_RS18490 PF00534 Glycosyl transferases group 1 AL552_RS18520 PF04266 ASCH domain AL552_RS18525 PF16925 Tetracyclin repressor-like, C-terminal domain AL552_RS18525 PF00440 Bacterial regulatory proteins, tetR family AL552_RS18530 PF00107 Zinc-binding dehydrogenase AL552_RS18530 PF16884 N-terminal domain of oxidoreductase AL552_RS18535 PF13417 Glutathione S-transferase, N-terminal domain AL552_RS18540 PF00199 Catalase AL552_RS18540 PF06628 Catalase-related immune-responsive AL552_RS18545 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL552_RS18545 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL552_RS18555 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL552_RS18565 PF12833 Helix-turn-helix domain AL552_RS18570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL552_RS18570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL552_RS18575 PF01238 Phosphomannose isomerase type I AL552_RS18585 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS18585 PF18113 Rubredoxin binding C-terminal domain AL552_RS18590 PF00258 Flavodoxin AL552_RS18590 PF00753 Metallo-beta-lactamase superfamily AL552_RS18590 PF00301 Rubredoxin AL552_RS18600 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS18605 PF00127 Copper binding proteins, plastocyanin/azurin family AL552_RS18610 PF02378 Phosphotransferase system, EIIC AL552_RS18620 PF01266 FAD dependent oxidoreductase AL552_RS18625 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS18625 PF18113 Rubredoxin binding C-terminal domain AL552_RS18630 PF00171 Aldehyde dehydrogenase family AL552_RS18635 PF00355 Rieske [2Fe-2S] domain AL552_RS18635 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AL552_RS18640 PF02028 BCCT, betaine/carnitine/choline family transporter AL552_RS18645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS18645 PF03466 LysR substrate binding domain AL552_RS18650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AL552_RS18650 PF00703 Glycosyl hydrolases family 2 AL552_RS18650 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AL552_RS18650 PF02837 Glycosyl hydrolases family 2, sugar binding domain AL552_RS18655 PF02028 BCCT, betaine/carnitine/choline family transporter AL552_RS18660 PF00392 Bacterial regulatory proteins, gntR family AL552_RS18660 PF07702 UTRA domain AL552_RS18685 PF00005 ABC transporter AL552_RS18685 PF08402 TOBE domain AL552_RS18710 PF00873 AcrB/AcrD/AcrF family AL552_RS18715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS18715 PF00529 HlyD membrane-fusion protein of T1SS AL552_RS18720 PF13091 PLD-like domain AL552_RS18745 PF09278 MerR, DNA binding AL552_RS18745 PF00376 MerR family regulatory protein AL552_RS18760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS18760 PF03466 LysR substrate binding domain AL552_RS18770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AL552_RS18770 PF13378 Enolase C-terminal domain-like AL552_RS18780 PF03144 Elongation factor Tu domain 2 AL552_RS18780 PF00009 Elongation factor Tu GTP binding domain AL552_RS18780 PF03764 Elongation factor G, domain IV AL552_RS18780 PF14492 Elongation Factor G, domain II AL552_RS18780 PF00679 Elongation factor G C-terminus AL552_RS18805 PF02001 Protein of unknown function DUF134 AL552_RS18815 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS18820 PF00005 ABC transporter AL552_RS18820 PF00571 CBS domain AL552_RS18825 PF17185 NlpE C-terminal OB domain AL552_RS18825 PF04170 NlpE N-terminal domain AL552_RS18830 PF06629 MltA-interacting protein MipA AL552_RS18845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS18845 PF03466 LysR substrate binding domain AL552_RS18870 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AL552_RS18870 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AL552_RS18880 PF00857 Isochorismatase family AL552_RS18890 PF00455 DeoR C terminal sensor domain AL552_RS18890 PF08220 DeoR-like helix-turn-helix domain AL552_RS18895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL552_RS18900 PF01641 SelR domain AL552_RS18900 PF01625 Peptide methionine sulfoxide reductase AL552_RS18915 PF03060 Nitronate monooxygenase AL552_RS18920 PF13520 Amino acid permease AL552_RS18930 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AL552_RS18935 PF12833 Helix-turn-helix domain AL552_RS18940 PF08359 YsiA-like protein, C-terminal region AL552_RS18940 PF00440 Bacterial regulatory proteins, tetR family AL552_RS18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS18955 PF03466 LysR substrate binding domain AL552_RS18960 PF01810 LysE type translocator AL552_RS18975 PF00118 TCP-1/cpn60 chaperonin family AL552_RS18980 PF00166 Chaperonin 10 Kd subunit AL552_RS18985 PF00581 Rhodanese-like domain AL552_RS19000 PF01070 FMN-dependent dehydrogenase AL552_RS19020 PF00669 Bacterial flagellin N-terminal helical region AL552_RS19030 PF10135 Rod binding protein AL552_RS19030 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AL552_RS19035 PF02119 Flagellar P-ring protein AL552_RS19040 PF02107 Flagellar L-ring protein AL552_RS19045 PF00460 Flagella basal body rod protein AL552_RS19045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL552_RS19050 PF00460 Flagella basal body rod protein AL552_RS19050 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL552_RS19055 PF00460 Flagella basal body rod protein AL552_RS19055 PF07559 Flagellar basal body protein FlaE AL552_RS19055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL552_RS19060 PF13861 FlgD Tudor-like domain AL552_RS19060 PF03963 Flagellar hook capping protein - N-terminal region AL552_RS19060 PF13860 FlgD Ig-like domain AL552_RS19065 PF00460 Flagella basal body rod protein AL552_RS19065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AL552_RS19070 PF00460 Flagella basal body rod protein AL552_RS19090 PF01464 Transglycosylase SLT domain AL552_RS19095 PF00133 tRNA synthetases class I (I, L, M and V) AL552_RS19095 PF08264 Anticodon-binding domain of tRNA AL552_RS19115 PF03315 Serine dehydratase beta chain AL552_RS19115 PF03313 Serine dehydratase alpha chain AL552_RS19120 PF00854 POT family AL552_RS19130 PF03466 LysR substrate binding domain AL552_RS19130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS19140 PF03466 LysR substrate binding domain AL552_RS19140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS19145 PF00691 OmpA family AL552_RS19145 PF01389 OmpA-like transmembrane domain AL552_RS19150 PF18027 Cytosolic carboxypeptidase N-terminal domain AL552_RS19150 PF00246 Zinc carboxypeptidase AL552_RS19155 PF01266 FAD dependent oxidoreductase AL552_RS19165 PF04393 Protein of unknown function (DUF535) AL552_RS19180 PF00392 Bacterial regulatory proteins, gntR family AL552_RS19180 PF07702 UTRA domain AL552_RS19185 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS19190 PF00005 ABC transporter AL552_RS19200 PF00266 Aminotransferase class-V AL552_RS19205 PF00202 Aminotransferase class-III AL552_RS19210 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS19215 PF00356 Bacterial regulatory proteins, lacI family AL552_RS19220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL552_RS19230 PF03611 PTS system sugar-specific permease component AL552_RS19240 PF05922 Peptidase inhibitor I9 AL552_RS19240 PF00082 Subtilase family AL552_RS19245 PF00657 GDSL-like Lipase/Acylhydrolase AL552_RS19250 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL552_RS19255 PF00194 Eukaryotic-type carbonic anhydrase AL552_RS19260 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AL552_RS19275 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS19280 PF03466 LysR substrate binding domain AL552_RS19280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS19315 PF14602 Hexapeptide repeat of succinyl-transferase AL552_RS19315 PF12464 Maltose acetyltransferase AL552_RS19320 PF02566 OsmC-like protein AL552_RS19325 PF01641 SelR domain AL552_RS19325 PF01625 Peptide methionine sulfoxide reductase AL552_RS19340 PF04244 Deoxyribodipyrimidine photo-lyase-related protein AL552_RS19345 PF00875 DNA photolyase AL552_RS19345 PF03441 FAD binding domain of DNA photolyase AL552_RS19350 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS19365 PF05230 MASE2 domain AL552_RS19365 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS19380 PF07670 Nucleoside recognition AL552_RS19380 PF07662 Na+ dependent nucleoside transporter C-terminus AL552_RS19380 PF01773 Na+ dependent nucleoside transporter N-terminus AL552_RS19400 PF01212 Beta-eliminating lyase AL552_RS19405 PF03116 NQR2, RnfD, RnfE family AL552_RS19410 PF01654 Cytochrome bd terminal oxidase subunit I AL552_RS19415 PF02322 Cytochrome bd terminal oxidase subunit II AL552_RS19430 PF01266 FAD dependent oxidoreductase AL552_RS19450 PF05525 Branched-chain amino acid transport protein AL552_RS19455 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS19455 PF07694 5TMR of 5TMR-LYT AL552_RS19465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS19465 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS19475 PF00232 Glycosyl hydrolase family 1 AL552_RS19500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS19500 PF03466 LysR substrate binding domain AL552_RS19505 PF08443 RimK-like ATP-grasp domain AL552_RS19505 PF18030 RimK PreATP-grasp domain AL552_RS19510 PF18030 RimK PreATP-grasp domain AL552_RS19510 PF08443 RimK-like ATP-grasp domain AL552_RS19515 PF00753 Metallo-beta-lactamase superfamily AL552_RS19520 PF17810 Arginine decarboxylase helical bundle domain AL552_RS19520 PF17944 Arginine decarboxylase C-terminal helical extension AL552_RS19520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL552_RS19525 PF00491 Arginase family AL552_RS19530 PF07690 Major Facilitator Superfamily AL552_RS19535 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL552_RS19535 PF00326 Prolyl oligopeptidase family AL552_RS19550 PF00950 ABC 3 transport family AL552_RS19555 PF00005 ABC transporter AL552_RS19605 PF02472 Biopolymer transport protein ExbD/TolR AL552_RS19610 PF01618 MotA/TolQ/ExbB proton channel family AL552_RS19615 PF01618 MotA/TolQ/ExbB proton channel family AL552_RS19625 PF07715 TonB-dependent Receptor Plug Domain AL552_RS19625 PF00593 TonB dependent receptor AL552_RS19630 PF16750 Sensor domain of 2-component histidine kinase AL552_RS19630 PF00672 HAMP domain AL552_RS19630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS19630 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS19635 PF00486 Transcriptional regulatory protein, C terminal AL552_RS19635 PF00072 Response regulator receiver domain AL552_RS19640 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AL552_RS19640 PF00056 lactate/malate dehydrogenase, NAD binding domain AL552_RS19645 PF03009 Glycerophosphoryl diester phosphodiesterase family AL552_RS19655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AL552_RS19655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AL552_RS19660 PF10928 Protein of unknown function (DUF2810) AL552_RS19715 PF04013 Putative SAM-dependent RNA methyltransferase AL552_RS19720 PF01523 Putative modulator of DNA gyrase AL552_RS19725 PF01523 Putative modulator of DNA gyrase AL552_RS19730 PF08543 Phosphomethylpyrimidine kinase AL552_RS19735 PF00005 ABC transporter AL552_RS19740 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS19745 PF09084 NMT1/THI5 like AL552_RS19750 PF03070 TENA/THI-4/PQQC family AL552_RS19755 PF02110 Hydroxyethylthiazole kinase family AL552_RS19760 PF02581 Thiamine monophosphate synthase AL552_RS19770 PF01568 Molydopterin dinucleotide binding domain AL552_RS19770 PF18364 Molybdopterin oxidoreductase N-terminal domain AL552_RS19770 PF00384 Molybdopterin oxidoreductase AL552_RS19775 PF03264 NapC/NirT cytochrome c family, N-terminal region AL552_RS19780 PF13302 Acetyltransferase (GNAT) domain AL552_RS19800 PF00583 Acetyltransferase (GNAT) family AL552_RS19815 PF00155 Aminotransferase class I and II AL552_RS19815 PF00392 Bacterial regulatory proteins, gntR family AL552_RS19820 PF02595 Glycerate kinase family AL552_RS19825 PF02447 GntP family permease AL552_RS19830 PF13556 PucR C-terminal helix-turn-helix domain AL552_RS19830 PF17853 GGDEF-like domain AL552_RS19830 PF05651 Putative sugar diacid recognition AL552_RS19855 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS19870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS19870 PF03466 LysR substrate binding domain AL552_RS19880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS19880 PF03466 LysR substrate binding domain AL552_RS19885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL552_RS19890 PF01661 Macro domain AL552_RS19895 PF01204 Trehalase AL552_RS19905 PF12706 Beta-lactamase superfamily domain AL552_RS19915 PF07690 Major Facilitator Superfamily AL552_RS19920 PF13533 Biotin-lipoyl like AL552_RS19925 PF03922 OmpW family AL552_RS19930 PF13599 Pentapeptide repeats (9 copies) AL552_RS19945 PF18416 N-acetylglucosamine binding protein domain 2 AL552_RS19945 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AL552_RS19950 PF01037 Lrp/AsnC ligand binding domain AL552_RS19955 PF01810 LysE type translocator AL552_RS19960 PF00326 Prolyl oligopeptidase family AL552_RS19965 PF04954 Siderophore-interacting protein AL552_RS19965 PF08021 Siderophore-interacting FAD-binding domain AL552_RS19970 PF03466 LysR substrate binding domain AL552_RS19970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS19975 PF00797 N-acetyltransferase AL552_RS19980 PF08240 Alcohol dehydrogenase GroES-like domain AL552_RS19980 PF00107 Zinc-binding dehydrogenase AL552_RS19985 PF00756 Putative esterase AL552_RS19995 PF17152 Periplasmic sensor domain AL552_RS19995 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS20010 PF03466 LysR substrate binding domain AL552_RS20010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS20025 PF00849 RNA pseudouridylate synthase AL552_RS20030 PF01554 MatE AL552_RS20040 PF03707 Bacterial signalling protein N terminal repeat AL552_RS20040 PF00563 EAL domain AL552_RS20040 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS20050 PF06865 Pyrimidine/purine nucleoside phosphorylase AL552_RS20060 PF08329 Chitinase A, N-terminal domain AL552_RS20060 PF00704 Glycosyl hydrolases family 18 AL552_RS20065 PF12697 Alpha/beta hydrolase family AL552_RS20080 PF03600 Citrate transporter AL552_RS20090 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AL552_RS20100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AL552_RS20100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AL552_RS20105 PF06029 AlkA N-terminal domain AL552_RS20105 PF00730 HhH-GPD superfamily base excision DNA repair protein AL552_RS20115 PF07681 DoxX AL552_RS20120 PF02678 Pirin AL552_RS20120 PF17954 Quercetinase C-terminal cupin domain AL552_RS20125 PF03466 LysR substrate binding domain AL552_RS20125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS20140 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AL552_RS20150 PF03616 Sodium/glutamate symporter AL552_RS20155 PF00155 Aminotransferase class I and II AL552_RS20155 PF00392 Bacterial regulatory proteins, gntR family AL552_RS20170 PF03616 Sodium/glutamate symporter AL552_RS20190 PF17200 Single Cache domain 2 AL552_RS20190 PF00672 HAMP domain AL552_RS20190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS20195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AL552_RS20205 PF00072 Response regulator receiver domain AL552_RS20205 PF04397 LytTr DNA-binding domain AL552_RS20210 PF07694 5TMR of 5TMR-LYT AL552_RS20210 PF13492 GAF domain AL552_RS20210 PF06580 Histidine kinase AL552_RS20210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS20230 PF00005 ABC transporter AL552_RS20245 PF01098 Cell cycle protein AL552_RS20250 PF01709 Transcriptional regulator AL552_RS20260 PF00672 HAMP domain AL552_RS20260 PF01627 Hpt domain AL552_RS20260 PF17149 Periplasmic sensor domain found in signal transduction proteins AL552_RS20260 PF00072 Response regulator receiver domain AL552_RS20260 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS20260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS20270 PF00925 GTP cyclohydrolase II AL552_RS20270 PF08719 Domain of unknown function (DUF1768) AL552_RS20280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS20280 PF00005 ABC transporter AL552_RS20285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS20285 PF00005 ABC transporter AL552_RS20300 PF13614 AAA domain AL552_RS20300 PF18607 ParA helix turn helix domain AL552_RS20305 PF02195 ParB-like nuclease domain AL552_RS20305 PF08775 ParB family AL552_RS20310 PF05127 Helicase AL552_RS20310 PF13718 GNAT acetyltransferase 2 AL552_RS20325 PF03466 LysR substrate binding domain AL552_RS20325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS20335 PF00267 Gram-negative porin AL552_RS20340 PF00367 phosphotransferase system, EIIB AL552_RS20340 PF02378 Phosphotransferase system, EIIC AL552_RS20345 PF01380 SIS domain AL552_RS20355 PF01380 SIS domain AL552_RS20355 PF01418 Helix-turn-helix domain, rpiR family AL552_RS20360 PF00246 Zinc carboxypeptidase AL552_RS20365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL552_RS20370 PF03358 NADPH-dependent FMN reductase AL552_RS20385 PF00005 ABC transporter AL552_RS20385 PF00664 ABC transporter transmembrane region AL552_RS20385 PF03412 Peptidase C39 family AL552_RS20400 PF00529 HlyD membrane-fusion protein of T1SS AL552_RS20405 PF00072 Response regulator receiver domain AL552_RS20405 PF02954 Bacterial regulatory protein, Fis family AL552_RS20405 PF00158 Sigma-54 interaction domain AL552_RS20410 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS20410 PF02743 Cache domain AL552_RS20410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS20415 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AL552_RS20415 PF01243 Pyridoxamine 5'-phosphate oxidase AL552_RS20425 PF12833 Helix-turn-helix domain AL552_RS20430 PF01619 Proline dehydrogenase AL552_RS20430 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AL552_RS20430 PF00171 Aldehyde dehydrogenase family AL552_RS20430 PF14850 DNA-binding domain of Proline dehydrogenase AL552_RS20440 PF00474 Sodium:solute symporter family AL552_RS20455 PF13302 Acetyltransferase (GNAT) domain AL552_RS20465 PF01037 Lrp/AsnC ligand binding domain AL552_RS20475 PF00005 ABC transporter AL552_RS20475 PF00664 ABC transporter transmembrane region AL552_RS20485 PF06719 AraC-type transcriptional regulator N-terminus AL552_RS20485 PF12833 Helix-turn-helix domain AL552_RS20510 PF03475 3-alpha domain AL552_RS20510 PF03473 MOSC domain AL552_RS20530 PF08281 Sigma-70, region 4 AL552_RS20530 PF04542 Sigma-70 region 2 AL552_RS20535 PF12833 Helix-turn-helix domain AL552_RS20535 PF01965 DJ-1/PfpI family AL552_RS20545 PF03466 LysR substrate binding domain AL552_RS20545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS20565 PF13192 Thioredoxin domain AL552_RS20565 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS20570 PF10417 C-terminal domain of 1-Cys peroxiredoxin AL552_RS20570 PF00578 AhpC/TSA family AL552_RS20575 PF01047 MarR family AL552_RS20580 PF02566 OsmC-like protein AL552_RS20595 PF12704 MacB-like periplasmic core domain AL552_RS20595 PF02687 FtsX-like permease family AL552_RS20600 PF00005 ABC transporter AL552_RS20620 PF00535 Glycosyl transferase family 2 AL552_RS20630 PF13847 Methyltransferase domain AL552_RS20635 PF01136 Peptidase family U32 AL552_RS20645 PF00367 phosphotransferase system, EIIB AL552_RS20645 PF02378 Phosphotransferase system, EIIC AL552_RS20655 PF00486 Transcriptional regulatory protein, C terminal AL552_RS20655 PF00072 Response regulator receiver domain AL552_RS20660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS20660 PF08521 Two-component sensor kinase N-terminal AL552_RS20660 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS20665 PF01547 Bacterial extracellular solute-binding protein AL552_RS20670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AL552_RS20670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AL552_RS20675 PF04183 IucA / IucC family AL552_RS20675 PF06276 Ferric iron reductase FhuF-like transporter AL552_RS20685 PF06276 Ferric iron reductase FhuF-like transporter AL552_RS20685 PF04183 IucA / IucC family AL552_RS20690 PF02655 ATP-grasp domain AL552_RS20690 PF00206 Lyase AL552_RS20695 PF07715 TonB-dependent Receptor Plug Domain AL552_RS20695 PF00593 TonB dependent receptor AL552_RS20700 PF07715 TonB-dependent Receptor Plug Domain AL552_RS20700 PF07660 Secretin and TonB N terminus short domain AL552_RS20700 PF00593 TonB dependent receptor AL552_RS20705 PF01497 Periplasmic binding protein AL552_RS20710 PF01032 FecCD transport family AL552_RS20715 PF01032 FecCD transport family AL552_RS20720 PF00005 ABC transporter AL552_RS20730 PF00675 Insulinase (Peptidase family M16) AL552_RS20730 PF05193 Peptidase M16 inactive domain AL552_RS20740 PF01551 Peptidase family M23 AL552_RS20740 PF04225 Opacity-associated protein A LysM-like domain AL552_RS20765 PF07690 Major Facilitator Superfamily AL552_RS20775 PF00356 Bacterial regulatory proteins, lacI family AL552_RS20790 PF07690 Major Facilitator Superfamily AL552_RS20795 PF00474 Sodium:solute symporter family AL552_RS20800 PF03313 Serine dehydratase alpha chain AL552_RS20800 PF03315 Serine dehydratase beta chain AL552_RS20810 PF02264 LamB porin AL552_RS20825 PF16657 Maltogenic Amylase, C-terminal domain AL552_RS20825 PF02903 Alpha amylase, N-terminal ig-like domain AL552_RS20825 PF00128 Alpha amylase, catalytic domain AL552_RS20830 PF04231 Endonuclease I AL552_RS20835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL552_RS20835 PF11852 Domain of unknown function (DUF3372) AL552_RS20835 PF17967 Pullulanase N2 domain AL552_RS20835 PF18494 Pullulanase Ins domain AL552_RS20835 PF03714 Bacterial pullanase-associated domain AL552_RS20850 PF01276 Orn/Lys/Arg decarboxylase, major domain AL552_RS20850 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AL552_RS20850 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AL552_RS20855 PF13520 Amino acid permease AL552_RS20865 PF08543 Phosphomethylpyrimidine kinase AL552_RS20870 PF00375 Sodium:dicarboxylate symporter family AL552_RS20875 PF03193 RsgA GTPase AL552_RS20880 PF02378 Phosphotransferase system, EIIC AL552_RS20880 PF00367 phosphotransferase system, EIIB AL552_RS20885 PF02630 SCO1/SenC AL552_RS20900 PF17874 MalT-like TPR region AL552_RS20900 PF00196 Bacterial regulatory proteins, luxR family AL552_RS20910 PF00343 Carbohydrate phosphorylase AL552_RS20915 PF02446 4-alpha-glucanotransferase AL552_RS20920 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AL552_RS20920 PF02806 Alpha amylase, C-terminal all-beta domain AL552_RS20920 PF00128 Alpha amylase, catalytic domain AL552_RS20925 PF00912 Transglycosylase AL552_RS20930 PF00128 Alpha amylase, catalytic domain AL552_RS20945 PF07670 Nucleoside recognition AL552_RS20950 PF07670 Nucleoside recognition AL552_RS20955 PF01546 Peptidase family M20/M25/M40 AL552_RS20955 PF07687 Peptidase dimerisation domain AL552_RS20960 PF06803 Protein of unknown function (DUF1232) AL552_RS20965 PF00375 Sodium:dicarboxylate symporter family AL552_RS20975 PF02706 Chain length determinant protein AL552_RS20975 PF13614 AAA domain AL552_RS20975 PF13807 G-rich domain on putative tyrosine kinase AL552_RS20980 PF01451 Low molecular weight phosphotyrosine protein phosphatase AL552_RS20985 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AL552_RS20985 PF10531 SLBB domain AL552_RS20985 PF02563 Polysaccharide biosynthesis/export protein AL552_RS20995 PF00881 Nitroreductase family AL552_RS21000 PF01914 MarC family integral membrane protein AL552_RS21005 PF01734 Patatin-like phospholipase AL552_RS21010 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AL552_RS21010 PF18416 N-acetylglucosamine binding protein domain 2 AL552_RS21015 PF02469 Fasciclin domain AL552_RS21020 PF03441 FAD binding domain of DNA photolyase AL552_RS21020 PF00875 DNA photolyase AL552_RS21030 PF17773 UPF0176 acylphosphatase like domain AL552_RS21030 PF00581 Rhodanese-like domain AL552_RS21040 PF00561 alpha/beta hydrolase fold AL552_RS21045 PF07943 Penicillin-binding protein 5, C-terminal domain AL552_RS21045 PF00768 D-alanyl-D-alanine carboxypeptidase AL552_RS21050 PF00686 Starch binding domain AL552_RS21050 PF00128 Alpha amylase, catalytic domain AL552_RS21055 PF12833 Helix-turn-helix domain AL552_RS21055 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AL552_RS21060 PF00881 Nitroreductase family AL552_RS21070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS21070 PF03466 LysR substrate binding domain AL552_RS21075 PF09905 DNA-binding protein VF530 AL552_RS21085 PF00175 Oxidoreductase NAD-binding domain AL552_RS21085 PF00970 Oxidoreductase FAD-binding domain AL552_RS21090 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AL552_RS21095 PF01594 AI-2E family transporter AL552_RS21105 PF13533 Biotin-lipoyl like AL552_RS21130 PF00892 EamA-like transporter family AL552_RS21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS21135 PF03466 LysR substrate binding domain AL552_RS21140 PF07690 Major Facilitator Superfamily AL552_RS21150 PF00583 Acetyltransferase (GNAT) family AL552_RS21160 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL552_RS21165 PF04055 Radical SAM superfamily AL552_RS21170 PF01228 Glycine radical AL552_RS21170 PF02901 Pyruvate formate lyase-like AL552_RS21210 PF08000 Bacterial PH domain AL552_RS21225 PF00691 OmpA family AL552_RS21225 PF13677 Membrane MotB of proton-channel complex MotA/MotB AL552_RS21230 PF01618 MotA/TolQ/ExbB proton channel family AL552_RS21235 PF04545 Sigma-70, region 4 AL552_RS21235 PF04542 Sigma-70 region 2 AL552_RS21240 PF03748 Flagellar basal body-associated protein FliL AL552_RS21255 PF02561 Flagellar protein FliS AL552_RS21260 PF02465 Flagellar hook-associated protein 2 N-terminus AL552_RS21260 PF07195 Flagellar hook-associated protein 2 C-terminus AL552_RS21260 PF07196 Flagellin hook IN motif AL552_RS21270 PF00700 Bacterial flagellin C-terminal helical region AL552_RS21270 PF00669 Bacterial flagellin N-terminal helical region AL552_RS21280 PF00771 FHIPEP family AL552_RS21285 PF01312 FlhB HrpN YscU SpaS Family AL552_RS21290 PF01311 Bacterial export proteins, family 1 AL552_RS21295 PF01313 Bacterial export proteins, family 3 AL552_RS21300 PF00813 FliP family AL552_RS21305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AL552_RS21320 PF00072 Response regulator receiver domain AL552_RS21320 PF02954 Bacterial regulatory protein, Fis family AL552_RS21320 PF00158 Sigma-54 interaction domain AL552_RS21325 PF02049 Flagellar hook-basal body complex protein FliE AL552_RS21330 PF01514 Secretory protein of YscJ/FliF family AL552_RS21330 PF08345 Flagellar M-ring protein C-terminal AL552_RS21335 PF01706 FliG C-terminal domain AL552_RS21335 PF14842 FliG N-terminal domain AL552_RS21335 PF14841 FliG middle domain AL552_RS21360 PF03466 LysR substrate binding domain AL552_RS21360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS21390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL552_RS21395 PF03466 LysR substrate binding domain AL552_RS21395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS21415 PF00072 Response regulator receiver domain AL552_RS21415 PF00486 Transcriptional regulatory protein, C terminal AL552_RS21420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS21420 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS21425 PF00080 Copper/zinc superoxide dismutase (SODC) AL552_RS21435 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS21440 PF03707 Bacterial signalling protein N terminal repeat AL552_RS21440 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS21440 PF13188 PAS domain AL552_RS21440 PF00563 EAL domain AL552_RS21445 PF00155 Aminotransferase class I and II AL552_RS21450 PF00107 Zinc-binding dehydrogenase AL552_RS21450 PF08240 Alcohol dehydrogenase GroES-like domain AL552_RS21455 PF00194 Eukaryotic-type carbonic anhydrase AL552_RS21460 PF00924 Mechanosensitive ion channel AL552_RS21470 PF01070 FMN-dependent dehydrogenase AL552_RS21475 PF02652 L-lactate permease AL552_RS21480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS21480 PF03466 LysR substrate binding domain AL552_RS21485 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL552_RS21485 PF00326 Prolyl oligopeptidase family AL552_RS21490 PF00005 ABC transporter AL552_RS21490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AL552_RS21510 PF13609 Gram-negative porin AL552_RS21515 PF12945 Flagellar protein YcgR AL552_RS21515 PF07238 PilZ domain AL552_RS21530 PF00583 Acetyltransferase (GNAT) family AL552_RS21535 PF12838 4Fe-4S dicluster domain AL552_RS21535 PF12800 4Fe-4S binding domain AL552_RS21540 PF12801 4Fe-4S binding domain AL552_RS21540 PF13237 4Fe-4S dicluster domain AL552_RS21560 PF12558 ATP-binding cassette cobalt transporter AL552_RS21560 PF00005 ABC transporter AL552_RS21565 PF07155 ECF-type riboflavin transporter, S component AL552_RS21570 PF00529 HlyD membrane-fusion protein of T1SS AL552_RS21570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS21575 PF11742 Protein of unknown function (DUF3302) AL552_RS21580 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS21595 PF01048 Phosphorylase superfamily AL552_RS21605 PF08349 Protein of unknown function (DUF1722) AL552_RS21610 PF13411 MerR HTH family regulatory protein AL552_RS21615 PF03441 FAD binding domain of DNA photolyase AL552_RS21615 PF00875 DNA photolyase AL552_RS21620 PF17969 L,D-transpeptidase C-terminal domain AL552_RS21620 PF01476 LysM domain AL552_RS21620 PF03734 L,D-transpeptidase catalytic domain AL552_RS21630 PF00271 Helicase conserved C-terminal domain AL552_RS21630 PF00270 DEAD/DEAH box helicase AL552_RS21635 PF00326 Prolyl oligopeptidase family AL552_RS21635 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AL552_RS21640 PF00593 TonB dependent receptor AL552_RS21640 PF07715 TonB-dependent Receptor Plug Domain AL552_RS21660 PF00672 HAMP domain AL552_RS21660 PF12729 Four helix bundle sensory module for signal transduction AL552_RS21660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS21665 PF12849 PBP superfamily domain AL552_RS21670 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS21675 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS21680 PF00005 ABC transporter AL552_RS21695 PF13519 von Willebrand factor type A domain AL552_RS21700 PF13519 von Willebrand factor type A domain AL552_RS21710 PF01882 Protein of unknown function DUF58 AL552_RS21715 PF17863 AAA lid domain AL552_RS21715 PF07726 ATPase family associated with various cellular activities (AAA) AL552_RS21725 PF02743 Cache domain AL552_RS21725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS21725 PF00672 HAMP domain AL552_RS21740 PF00196 Bacterial regulatory proteins, luxR family AL552_RS21750 PF00005 ABC transporter AL552_RS21750 PF00664 ABC transporter transmembrane region AL552_RS21765 PF01032 FecCD transport family AL552_RS21770 PF01497 Periplasmic binding protein AL552_RS21775 PF00005 ABC transporter AL552_RS21780 PF00593 TonB dependent receptor AL552_RS21780 PF07715 TonB-dependent Receptor Plug Domain AL552_RS21785 PF00664 ABC transporter transmembrane region AL552_RS21785 PF00005 ABC transporter AL552_RS21805 PF00873 AcrB/AcrD/AcrF family AL552_RS21810 PF13533 Biotin-lipoyl like AL552_RS21815 PF03466 LysR substrate binding domain AL552_RS21815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS21825 PF00579 tRNA synthetases class I (W and Y) AL552_RS21830 PF00072 Response regulator receiver domain AL552_RS21830 PF00196 Bacterial regulatory proteins, luxR family AL552_RS21840 PF00391 PEP-utilising enzyme, mobile domain AL552_RS21840 PF02896 PEP-utilising enzyme, TIM barrel domain AL552_RS21840 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AL552_RS21845 PF03618 Kinase/pyrophosphorylase AL552_RS21850 PF17763 Glutaminase/Asparaginase C-terminal domain AL552_RS21850 PF00710 Asparaginase, N-terminal AL552_RS21855 PF00709 Adenylosuccinate synthetase AL552_RS21860 PF03466 LysR substrate binding domain AL552_RS21860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS21870 PF01810 LysE type translocator AL552_RS21875 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AL552_RS21885 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL552_RS21890 PF00291 Pyridoxal-phosphate dependent enzyme AL552_RS21895 PF00202 Aminotransferase class-III AL552_RS21900 PF00171 Aldehyde dehydrogenase family AL552_RS21905 PF01037 Lrp/AsnC ligand binding domain AL552_RS21910 PF03480 Bacterial extracellular solute-binding protein, family 7 AL552_RS21920 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AL552_RS21930 PF00392 Bacterial regulatory proteins, gntR family AL552_RS21930 PF00155 Aminotransferase class I and II AL552_RS21935 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AL552_RS21940 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AL552_RS21945 PF12833 Helix-turn-helix domain AL552_RS21960 PF00107 Zinc-binding dehydrogenase AL552_RS21960 PF08240 Alcohol dehydrogenase GroES-like domain AL552_RS21965 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL552_RS21975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS21975 PF03466 LysR substrate binding domain AL552_RS21980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS21980 PF03466 LysR substrate binding domain AL552_RS21990 PF00271 Helicase conserved C-terminal domain AL552_RS21990 PF00270 DEAD/DEAH box helicase AL552_RS22000 PF00535 Glycosyl transferase family 2 AL552_RS22030 PF00155 Aminotransferase class I and II AL552_RS22035 PF12833 Helix-turn-helix domain AL552_RS22035 PF01497 Periplasmic binding protein AL552_RS22085 PF02264 LamB porin AL552_RS22085 PF11471 Maltoporin periplasmic N-terminal extension AL552_RS22090 PF00356 Bacterial regulatory proteins, lacI family AL552_RS22095 PF00367 phosphotransferase system, EIIB AL552_RS22095 PF02378 Phosphotransferase system, EIIC AL552_RS22100 PF00294 pfkB family carbohydrate kinase AL552_RS22105 PF08244 Glycosyl hydrolases family 32 C terminal AL552_RS22105 PF00251 Glycosyl hydrolases family 32 N-terminal domain AL552_RS22115 PF02798 Glutathione S-transferase, N-terminal domain AL552_RS22125 PF07943 Penicillin-binding protein 5, C-terminal domain AL552_RS22125 PF00768 D-alanyl-D-alanine carboxypeptidase AL552_RS22135 PF00462 Glutaredoxin AL552_RS22135 PF08534 Redoxin AL552_RS22140 PF00962 Adenosine/AMP deaminase AL552_RS22155 PF00313 'Cold-shock' DNA-binding domain AL552_RS22160 PF05726 Pirin C-terminal cupin domain AL552_RS22160 PF02678 Pirin AL552_RS22165 PF01734 Patatin-like phospholipase AL552_RS22180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AL552_RS22190 PF01219 Prokaryotic diacylglycerol kinase AL552_RS22200 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS22200 PF00672 HAMP domain AL552_RS22200 PF16527 Two-component sensor protein CpxA, periplasmic domain AL552_RS22200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS22205 PF00072 Response regulator receiver domain AL552_RS22205 PF00486 Transcriptional regulatory protein, C terminal AL552_RS22220 PF01323 DSBA-like thioredoxin domain AL552_RS22235 PF00255 Glutathione peroxidase AL552_RS22240 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AL552_RS22250 PF07690 Major Facilitator Superfamily AL552_RS22265 PF01966 HD domain AL552_RS22270 PF07969 Amidohydrolase family AL552_RS22275 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AL552_RS22280 PF01769 Divalent cation transporter AL552_RS22280 PF00571 CBS domain AL552_RS22280 PF03448 MgtE intracellular N domain AL552_RS22285 PF03109 ABC1 family AL552_RS22290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS22290 PF00529 HlyD membrane-fusion protein of T1SS AL552_RS22315 PF00486 Transcriptional regulatory protein, C terminal AL552_RS22315 PF00072 Response regulator receiver domain AL552_RS22320 PF00672 HAMP domain AL552_RS22320 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS22320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS22320 PF16527 Two-component sensor protein CpxA, periplasmic domain AL552_RS22330 PF00392 Bacterial regulatory proteins, gntR family AL552_RS22330 PF00155 Aminotransferase class I and II AL552_RS22335 PF13520 Amino acid permease AL552_RS22370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_RS22370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AL552_RS22375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS22375 PF00672 HAMP domain AL552_RS22375 PF01627 Hpt domain AL552_RS22375 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS22375 PF00072 Response regulator receiver domain AL552_RS22375 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL552_RS22385 PF04363 Protein of unknown function (DUF496) AL552_RS22400 PF01541 GIY-YIG catalytic domain AL552_RS22410 PF13407 Periplasmic binding protein domain AL552_RS22415 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS22415 PF09308 LuxQ, periplasmic AL552_RS22415 PF00072 Response regulator receiver domain AL552_RS22415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS22425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS22425 PF00529 HlyD membrane-fusion protein of T1SS AL552_RS22445 PF01037 Lrp/AsnC ligand binding domain AL552_RS22475 PF13721 SecD export protein N-terminal TM region AL552_RS22475 PF02355 Protein export membrane protein AL552_RS22475 PF07549 SecD/SecF GG Motif AL552_RS22490 PF01810 LysE type translocator AL552_RS22500 PF00106 short chain dehydrogenase AL552_RS22505 PF02803 Thiolase, C-terminal domain AL552_RS22505 PF00108 Thiolase, N-terminal domain AL552_RS22515 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AL552_RS22525 PF03264 NapC/NirT cytochrome c family, N-terminal region AL552_RS22530 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AL552_RS22535 PF00384 Molybdopterin oxidoreductase AL552_RS22535 PF01568 Molydopterin dinucleotide binding domain AL552_RS22535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS22545 PF12838 4Fe-4S dicluster domain AL552_RS22545 PF13187 4Fe-4S dicluster domain AL552_RS22550 PF00672 HAMP domain AL552_RS22550 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AL552_RS22550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS22550 PF07730 Histidine kinase AL552_RS22555 PF00072 Response regulator receiver domain AL552_RS22555 PF00196 Bacterial regulatory proteins, luxR family AL552_RS22575 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL552_RS22585 PF00873 AcrB/AcrD/AcrF family AL552_RS22590 PF17200 Single Cache domain 2 AL552_RS22590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS22590 PF00672 HAMP domain AL552_RS22595 PF00472 RF-1 domain AL552_RS22600 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS22605 PF01389 OmpA-like transmembrane domain AL552_RS22605 PF00691 OmpA family AL552_RS22615 PF00793 DAHP synthetase I family AL552_RS22620 PF07690 Major Facilitator Superfamily AL552_RS22625 PF08447 PAS fold AL552_RS22625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS22630 PF02779 Transketolase, pyrimidine binding domain AL552_RS22630 PF02780 Transketolase, C-terminal domain AL552_RS22630 PF00456 Transketolase, thiamine diphosphate binding domain AL552_RS22635 PF00923 Transaldolase/Fructose-6-phosphate aldolase AL552_RS22655 PF08329 Chitinase A, N-terminal domain AL552_RS22655 PF00704 Glycosyl hydrolases family 18 AL552_RS22660 PF03707 Bacterial signalling protein N terminal repeat AL552_RS22660 PF00563 EAL domain AL552_RS22660 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS22665 PF00581 Rhodanese-like domain AL552_RS22685 PF00899 ThiF family AL552_RS22690 PF03453 MoeA N-terminal region (domain I and II) AL552_RS22690 PF03454 MoeA C-terminal region (domain IV) AL552_RS22690 PF00994 Probable molybdopterin binding domain AL552_RS22695 PF01227 GTP cyclohydrolase I AL552_RS22700 PF01566 Natural resistance-associated macrophage protein AL552_RS22710 PF00654 Voltage gated chloride channel AL552_RS22725 PF00248 Aldo/keto reductase family AL552_RS22730 PF00072 Response regulator receiver domain AL552_RS22740 PF01256 Carbohydrate kinase AL552_RS22740 PF03853 YjeF-related protein N-terminus AL552_RS22745 PF00478 IMP dehydrogenase / GMP reductase domain AL552_RS22750 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AL552_RS22760 PF01565 FAD binding domain AL552_RS22760 PF08031 Berberine and berberine like AL552_RS22780 PF00551 Formyl transferase AL552_RS22780 PF02911 Formyl transferase, C-terminal domain AL552_RS22780 PF01370 NAD dependent epimerase/dehydratase family AL552_RS22795 PF00392 Bacterial regulatory proteins, gntR family AL552_RS22800 PF00144 Beta-lactamase AL552_RS22810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL552_RS22820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS22820 PF03466 LysR substrate binding domain AL552_RS22835 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AL552_RS22840 PF07690 Major Facilitator Superfamily AL552_RS22860 PF00582 Universal stress protein family AL552_RS22870 PF00361 Proton-conducting membrane transporter AL552_RS22870 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AL552_RS22870 PF13244 Domain of unknown function (DUF4040) AL552_RS22870 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AL552_RS22875 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AL552_RS22880 PF00361 Proton-conducting membrane transporter AL552_RS22885 PF01899 Na+/H+ ion antiporter subunit AL552_RS22890 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AL552_RS22895 PF03334 Na+/H+ antiporter subunit AL552_RS22900 PF00392 Bacterial regulatory proteins, gntR family AL552_RS22900 PF07702 UTRA domain AL552_RS22905 PF11975 Family 4 glycosyl hydrolase C-terminal domain AL552_RS22905 PF02056 Family 4 glycosyl hydrolase AL552_RS22910 PF02378 Phosphotransferase system, EIIC AL552_RS22910 PF00367 phosphotransferase system, EIIB AL552_RS22915 PF13193 AMP-binding enzyme C-terminal domain AL552_RS22915 PF00501 AMP-binding enzyme AL552_RS22920 PF00766 Electron transfer flavoprotein FAD-binding domain AL552_RS22920 PF01012 Electron transfer flavoprotein domain AL552_RS22925 PF01012 Electron transfer flavoprotein domain AL552_RS22940 PF00005 ABC transporter AL552_RS22940 PF12399 Branched-chain amino acid ATP-binding cassette transporter AL552_RS22945 PF00501 AMP-binding enzyme AL552_RS22965 PF00005 ABC transporter AL552_RS22970 PF14535 AMP-binding enzyme C-terminal domain AL552_RS22970 PF00501 AMP-binding enzyme AL552_RS23000 PF02028 BCCT, betaine/carnitine/choline family transporter AL552_RS23005 PF00106 short chain dehydrogenase AL552_RS23010 PF00205 Thiamine pyrophosphate enzyme, central domain AL552_RS23010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AL552_RS23010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AL552_RS23015 PF03306 Alpha-acetolactate decarboxylase AL552_RS23020 PF03466 LysR substrate binding domain AL552_RS23020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS23025 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS23040 PF02322 Cytochrome bd terminal oxidase subunit II AL552_RS23045 PF01654 Cytochrome bd terminal oxidase subunit I AL552_RS23050 PF00392 Bacterial regulatory proteins, gntR family AL552_RS23050 PF00155 Aminotransferase class I and II AL552_RS23055 PF12464 Maltose acetyltransferase AL552_RS23055 PF14602 Hexapeptide repeat of succinyl-transferase AL552_RS23070 PF00672 HAMP domain AL552_RS23070 PF00072 Response regulator receiver domain AL552_RS23070 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AL552_RS23070 PF01627 Hpt domain AL552_RS23070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS23070 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS23075 PF00682 HMGL-like AL552_RS23080 PF18140 Propionyl-coenzyme A carboxylase BT domain AL552_RS23080 PF00289 Biotin carboxylase, N-terminal domain AL552_RS23080 PF02785 Biotin carboxylase C-terminal domain AL552_RS23080 PF00364 Biotin-requiring enzyme AL552_RS23080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AL552_RS23085 PF00378 Enoyl-CoA hydratase/isomerase AL552_RS23090 PF01039 Carboxyl transferase domain AL552_RS23095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL552_RS23095 PF02770 Acyl-CoA dehydrogenase, middle domain AL552_RS23095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL552_RS23100 PF09278 MerR, DNA binding AL552_RS23100 PF00376 MerR family regulatory protein AL552_RS23105 PF00108 Thiolase, N-terminal domain AL552_RS23105 PF02803 Thiolase, C-terminal domain AL552_RS23110 PF00171 Aldehyde dehydrogenase family AL552_RS23115 PF02770 Acyl-CoA dehydrogenase, middle domain AL552_RS23115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AL552_RS23115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AL552_RS23120 PF00378 Enoyl-CoA hydratase/isomerase AL552_RS23130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AL552_RS23130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AL552_RS23145 PF00440 Bacterial regulatory proteins, tetR family AL552_RS23145 PF13977 BetI-type transcriptional repressor, C-terminal AL552_RS23150 PF00171 Aldehyde dehydrogenase family AL552_RS23155 PF05199 GMC oxidoreductase AL552_RS23155 PF00732 GMC oxidoreductase AL552_RS23160 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AL552_RS23165 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS23170 PF00005 ABC transporter AL552_RS23170 PF00571 CBS domain AL552_RS23175 PF00881 Nitroreductase family AL552_RS23185 PF01145 SPFH domain / Band 7 family AL552_RS23185 PF16200 C-terminal region of band_7 AL552_RS23195 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS23195 PF03707 Bacterial signalling protein N terminal repeat AL552_RS23195 PF00563 EAL domain AL552_RS23195 PF13188 PAS domain AL552_RS23200 PF03150 Di-haem cytochrome c peroxidase AL552_RS23200 PF00034 Cytochrome c AL552_RS23225 PF04116 Fatty acid hydroxylase superfamily AL552_RS23275 PF05025 RbsD / FucU transport protein family AL552_RS23280 PF00005 ABC transporter AL552_RS23285 PF02653 Branched-chain amino acid transport system / permease component AL552_RS23290 PF13407 Periplasmic binding protein domain AL552_RS23295 PF00294 pfkB family carbohydrate kinase AL552_RS23300 PF00356 Bacterial regulatory proteins, lacI family AL552_RS23310 PF04973 Nicotinamide mononucleotide transporter AL552_RS23325 PF01497 Periplasmic binding protein AL552_RS23330 PF01032 FecCD transport family AL552_RS23335 PF01032 FecCD transport family AL552_RS23340 PF00005 ABC transporter AL552_RS23345 PF13411 MerR HTH family regulatory protein AL552_RS23350 PF12833 Helix-turn-helix domain AL552_RS23385 PF12805 FUSC-like inner membrane protein yccS AL552_RS23390 PF12462 DNA helicase IV / RNA helicase N terminal AL552_RS23390 PF00580 UvrD/REP helicase N-terminal domain AL552_RS23390 PF13361 UvrD-like helicase C-terminal domain AL552_RS23395 PF02142 MGS-like domain AL552_RS23400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL552_RS23420 PF00486 Transcriptional regulatory protein, C terminal AL552_RS23420 PF00072 Response regulator receiver domain AL552_RS23425 PF00884 Sulfatase AL552_RS23430 PF03466 LysR substrate binding domain AL552_RS23430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS23435 PF16385 Domain of unknown function AL552_RS23435 PF00884 Sulfatase AL552_RS23440 PF13186 Iron-sulfur cluster-binding domain AL552_RS23440 PF04055 Radical SAM superfamily AL552_RS23445 PF17863 AAA lid domain AL552_RS23445 PF07726 ATPase family associated with various cellular activities (AAA) AL552_RS23460 PF00092 von Willebrand factor type A domain AL552_RS23475 PF01872 RibD C-terminal domain AL552_RS23475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AL552_RS23480 PF03466 LysR substrate binding domain AL552_RS23480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS23485 PF00781 Diacylglycerol kinase catalytic domain AL552_RS23490 PF04076 Bacterial OB fold (BOF) protein AL552_RS23500 PF18081 Fanconi anemia-associated nuclease SAP domain AL552_RS23500 PF08774 VRR-NUC domain AL552_RS23515 PF01435 Peptidase family M48 AL552_RS23520 PF04011 LemA family AL552_RS23525 PF03606 C4-dicarboxylate anaerobic carrier AL552_RS23545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS23545 PF00072 Response regulator receiver domain AL552_RS23550 PF00155 Aminotransferase class I and II AL552_RS23555 PF01926 50S ribosome-binding GTPase AL552_RS23560 PF03707 Bacterial signalling protein N terminal repeat AL552_RS23560 PF00563 EAL domain AL552_RS23560 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS23565 PF08448 PAS fold AL552_RS23565 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS23575 PF00196 Bacterial regulatory proteins, luxR family AL552_RS23575 PF00072 Response regulator receiver domain AL552_RS23580 PF00072 Response regulator receiver domain AL552_RS23580 PF01584 CheW-like domain AL552_RS23585 PF08334 Type II secretion system (T2SS), protein G AL552_RS23585 PF07963 Prokaryotic N-terminal methylation motif AL552_RS23595 PF00892 EamA-like transporter family AL552_RS23620 PF04151 Bacterial pre-peptidase C-terminal domain AL552_RS23620 PF07504 Fungalysin/Thermolysin Propeptide Motif AL552_RS23620 PF01447 Thermolysin metallopeptidase, catalytic domain AL552_RS23620 PF02868 Thermolysin metallopeptidase, alpha-helical domain AL552_RS23620 PF03413 Peptidase propeptide and YPEB domain AL552_RS23625 PF00893 Small Multidrug Resistance protein AL552_RS23630 PF00892 EamA-like transporter family AL552_RS23645 PF00171 Aldehyde dehydrogenase family AL552_RS23655 PF01645 Conserved region in glutamate synthase AL552_RS23655 PF13187 4Fe-4S dicluster domain AL552_RS23660 PF00141 Peroxidase AL552_RS23665 PF09722 Protein of unknown function (DUF2384) AL552_RS23675 PF01757 Acyltransferase family AL552_RS23685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AL552_RS23690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL552_RS23715 PF03448 MgtE intracellular N domain AL552_RS23715 PF01769 Divalent cation transporter AL552_RS23715 PF00571 CBS domain AL552_RS23745 PF01327 Polypeptide deformylase AL552_RS23750 PF00376 MerR family regulatory protein AL552_RS23750 PF09278 MerR, DNA binding AL552_RS23760 PF02253 Phospholipase A1 AL552_RS23780 PF00664 ABC transporter transmembrane region AL552_RS23780 PF00005 ABC transporter AL552_RS23785 PF11490 DNA polymerase III polC-type N-terminus II AL552_RS23785 PF07733 Bacterial DNA polymerase III alpha NTPase domain AL552_RS23785 PF14579 Helix-hairpin-helix motif AL552_RS23785 PF02811 PHP domain AL552_RS23785 PF00929 Exonuclease AL552_RS23785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AL552_RS23810 PF02627 Carboxymuconolactone decarboxylase family AL552_RS23820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AL552_RS23825 PF02347 Glycine cleavage system P-protein AL552_RS23830 PF01597 Glycine cleavage H-protein AL552_RS23835 PF00464 Serine hydroxymethyltransferase AL552_RS23845 PF01571 Aminomethyltransferase folate-binding domain AL552_RS23845 PF08669 Glycine cleavage T-protein C-terminal barrel domain AL552_RS23855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS23865 PF00873 AcrB/AcrD/AcrF family AL552_RS23875 PF02378 Phosphotransferase system, EIIC AL552_RS23875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AL552_RS23885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AL552_RS23885 PF00381 PTS HPr component phosphorylation site AL552_RS23890 PF00356 Bacterial regulatory proteins, lacI family AL552_RS23890 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AL552_RS23905 PF00563 EAL domain AL552_RS23905 PF01590 GAF domain AL552_RS23905 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS23905 PF00989 PAS fold AL552_RS23910 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS23915 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS23920 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS23925 PF00005 ABC transporter AL552_RS23930 PF00224 Pyruvate kinase, barrel domain AL552_RS23930 PF02887 Pyruvate kinase, alpha/beta domain AL552_RS23935 PF07690 Major Facilitator Superfamily AL552_RS23945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS23945 PF00672 HAMP domain AL552_RS23945 PF00512 His Kinase A (phospho-acceptor) domain AL552_RS23950 PF02954 Bacterial regulatory protein, Fis family AL552_RS23950 PF00072 Response regulator receiver domain AL552_RS23950 PF14532 Sigma-54 interaction domain AL552_RS23960 PF00465 Iron-containing alcohol dehydrogenase AL552_RS23970 PF06483 Chitinase C AL552_RS23970 PF00704 Glycosyl hydrolases family 18 AL552_RS23975 PF00483 Nucleotidyl transferase AL552_RS23980 PF01268 Formate--tetrahydrofolate ligase AL552_RS23985 PF00294 pfkB family carbohydrate kinase AL552_RS24000 PF13419 Haloacid dehalogenase-like hydrolase AL552_RS24010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS24010 PF00672 HAMP domain AL552_RS24010 PF12729 Four helix bundle sensory module for signal transduction AL552_RS24020 PF04336 Acyl carrier protein phosphodiesterase AL552_RS24025 PF00270 DEAD/DEAH box helicase AL552_RS24025 PF00271 Helicase conserved C-terminal domain AL552_RS24030 PF12792 CSS motif domain associated with EAL AL552_RS24030 PF00563 EAL domain AL552_RS24045 PF01292 Prokaryotic cytochrome b561 AL552_RS24050 PF04264 YceI-like domain AL552_RS24055 PF01226 Formate/nitrite transporter AL552_RS24065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS24065 PF03466 LysR substrate binding domain AL552_RS24070 PF06496 Protein of unknown function (DUF1097) AL552_RS24075 PF11398 Protein of unknown function (DUF2813) AL552_RS24080 PF02872 5'-nucleotidase, C-terminal domain AL552_RS24080 PF00149 Calcineurin-like phosphoesterase AL552_RS24085 PF03741 Integral membrane protein TerC family AL552_RS24110 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AL552_RS24125 PF03061 Thioesterase superfamily AL552_RS24135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AL552_RS24135 PF12793 Sugar transport-related sRNA regulator N-term AL552_RS24160 PF01556 DnaJ C terminal domain AL552_RS24160 PF00684 DnaJ central domain AL552_RS24160 PF00226 DnaJ domain AL552_RS24170 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS24170 PF00563 EAL domain AL552_RS24170 PF00498 FHA domain AL552_RS24175 PF12241 Trans-2-enoyl-CoA reductase catalytic region AL552_RS24175 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AL552_RS24175 PF07055 Enoyl reductase FAD binding domain AL552_RS24180 PF13472 GDSL-like Lipase/Acylhydrolase family AL552_RS24185 PF00005 ABC transporter AL552_RS24200 PF02626 Carboxyltransferase domain, subdomain A and B AL552_RS24205 PF02682 Carboxyltransferase domain, subdomain C and D AL552_RS24210 PF03746 LamB/YcsF family AL552_RS24215 PF13426 PAS domain AL552_RS24215 PF00563 EAL domain AL552_RS24215 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS24215 PF05231 MASE1 AL552_RS24215 PF08447 PAS fold AL552_RS24215 PF08448 PAS fold AL552_RS24220 PF16363 GDP-mannose 4,6 dehydratase AL552_RS24230 PF00593 TonB dependent receptor AL552_RS24230 PF04886 PT repeat AL552_RS24230 PF07715 TonB-dependent Receptor Plug Domain AL552_RS24235 PF03466 LysR substrate binding domain AL552_RS24235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS24240 PF00583 Acetyltransferase (GNAT) family AL552_RS24240 PF13380 CoA binding domain AL552_RS24240 PF13607 Succinyl-CoA ligase like flavodoxin domain AL552_RS24250 PF05036 Sporulation related domain AL552_RS24255 PF01820 D-ala D-ala ligase N-terminus AL552_RS24255 PF07478 D-ala D-ala ligase C-terminus AL552_RS24265 PF01253 Translation initiation factor SUI1 AL552_RS24305 PF05707 Zonular occludens toxin (Zot) AL552_RS24340 PF03466 LysR substrate binding domain AL552_RS24340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS24350 PF00582 Universal stress protein family AL552_RS24355 PF03701 Uncharacterised protein family (UPF0181) AL552_RS24370 PF00486 Transcriptional regulatory protein, C terminal AL552_RS24370 PF00072 Response regulator receiver domain AL552_RS24380 PF02233 NAD(P) transhydrogenase beta subunit AL552_RS24385 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AL552_RS24385 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AL552_RS24385 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AL552_RS24400 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS24410 PF01590 GAF domain AL552_RS24410 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS24410 PF00360 Phytochrome region AL552_RS24410 PF00563 EAL domain AL552_RS24420 PF03459 TOBE domain AL552_RS24420 PF00005 ABC transporter AL552_RS24425 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS24435 PF07685 CobB/CobQ-like glutamine amidotransferase domain AL552_RS24435 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AL552_RS24450 PF18030 RimK PreATP-grasp domain AL552_RS24450 PF08443 RimK-like ATP-grasp domain AL552_RS24455 PF00155 Aminotransferase class I and II AL552_RS24460 PF12852 Cupin AL552_RS24460 PF12833 Helix-turn-helix domain AL552_RS24465 PF01554 MatE AL552_RS24475 PF03477 ATP cone domain AL552_RS24475 PF13597 Anaerobic ribonucleoside-triphosphate reductase AL552_RS24485 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AL552_RS24490 PF00873 AcrB/AcrD/AcrF family AL552_RS24500 PF04143 Sulphur transport AL552_RS24515 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS24515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AL552_RS24520 PF01177 Asp/Glu/Hydantoin racemase AL552_RS24525 PF02567 Phenazine biosynthesis-like protein AL552_RS24535 PF00384 Molybdopterin oxidoreductase AL552_RS24545 PF03466 LysR substrate binding domain AL552_RS24545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS24550 PF02634 FdhD/NarQ family AL552_RS24555 PF07690 Major Facilitator Superfamily AL552_RS24560 PF00196 Bacterial regulatory proteins, luxR family AL552_RS24560 PF00072 Response regulator receiver domain AL552_RS24565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AL552_RS24565 PF07730 Histidine kinase AL552_RS24565 PF05231 MASE1 AL552_RS24570 PF07690 Major Facilitator Superfamily AL552_RS24575 PF01238 Phosphomannose isomerase type I AL552_RS24600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AL552_RS24600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AL552_RS24605 PF00085 Thioredoxin AL552_RS24610 PF07690 Major Facilitator Superfamily AL552_RS24615 PF11756 Nitrous oxide-stimulated promoter AL552_RS24630 PF07715 TonB-dependent Receptor Plug Domain AL552_RS24630 PF00593 TonB dependent receptor AL552_RS24640 PF03605 Anaerobic c4-dicarboxylate membrane transporter AL552_RS24655 PF10414 Sirohaem synthase dimerisation region AL552_RS24655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AL552_RS24655 PF14824 Sirohaem biosynthesis protein central AL552_RS24660 PF01226 Formate/nitrite transporter AL552_RS24665 PF13806 Rieske-like [2Fe-2S] domain AL552_RS24670 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL552_RS24670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS24670 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL552_RS24670 PF04324 BFD-like [2Fe-2S] binding domain AL552_RS24670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL552_RS24675 PF14760 Rnk N-terminus AL552_RS24675 PF01272 Transcription elongation factor, GreA/GreB, C-term AL552_RS24685 PF13426 PAS domain AL552_RS24685 PF00990 Diguanylate cyclase, GGDEF domain AL552_RS24685 PF00563 EAL domain AL552_RS24740 PF00128 Alpha amylase, catalytic domain AL552_RS24740 PF09154 Domain of unknown function (DUF1939) AL552_RS24755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AL552_RS24755 PF00672 HAMP domain AL552_RS24760 PF00842 Alanine racemase, C-terminal domain AL552_RS24760 PF01168 Alanine racemase, N-terminal domain AL552_RS24775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS24775 PF03466 LysR substrate binding domain AL552_RS24780 PF14031 Putative serine dehydratase domain AL552_RS24780 PF01168 Alanine racemase, N-terminal domain AL552_RS24785 PF02423 Ornithine cyclodeaminase/mu-crystallin family AL552_RS24795 PF09330 D-lactate dehydrogenase, membrane binding AL552_RS24795 PF01565 FAD binding domain AL552_RS24800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AL552_RS24800 PF03466 LysR substrate binding domain AL552_RS24815 PF05762 VWA domain containing CoxE-like protein AL552_RS24820 PF07728 AAA domain (dynein-related subfamily) AL552_RS24820 PF17868 AAA lid domain AL552_RS24820 PF12592 Protein of unknown function (DUF3763) AL552_RS24830 PF01212 Beta-eliminating lyase AL552_RS24835 PF00034 Cytochrome c AL552_RS24840 PF03606 C4-dicarboxylate anaerobic carrier AL552_RS24850 PF08212 Lipocalin-like domain AL552_RS24860 PF13476 AAA domain AL552_RS24865 PF00149 Calcineurin-like phosphoesterase AL552_RS24865 PF12320 Type 5 capsule protein repressor C-terminal domain AL552_RS24880 PF04717 Type VI secretion system, phage-baseplate injector AL552_RS24880 PF06715 Gp5 C-terminal repeat (3 copies) AL552_RS24890 PF00004 ATPase family associated with various cellular activities (AAA) AL552_RS24890 PF10431 C-terminal, D2-small domain, of ClpB protein AL552_RS24890 PF17871 AAA lid domain AL552_RS24890 PF07724 AAA domain (Cdc48 subfamily) AL552_RS24900 PF05947 Type VI secretion system, TssF AL552_RS24915 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL552_RS24920 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AL552_RS24925 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AL552_RS24945 PF06744 Type VI secretion protein IcmF C-terminal AL552_RS24945 PF06761 Intracellular multiplication and human macrophage-killing AL552_RS24945 PF14331 ImcF-related N-terminal domain AL552_RS24975 PF03793 PASTA domain AL552_RS24975 PF00069 Protein kinase domain AL552_RS24995 PF00211 Adenylate and Guanylate cyclase catalytic domain AL552_RS24995 PF00072 Response regulator receiver domain AL552_RS25005 PF13417 Glutathione S-transferase, N-terminal domain AL552_RS25005 PF00043 Glutathione S-transferase, C-terminal domain AL552_RS25010 PF00440 Bacterial regulatory proteins, tetR family AL552_RS25010 PF08361 MAATS-type transcriptional repressor, C-terminal region AL552_RS25025 PF18267 Rubredoxin NAD+ reductase C-terminal domain AL552_RS25025 PF07992 Pyridine nucleotide-disulphide oxidoreductase AL552_RS25025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AL552_RS25025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AL552_RS25025 PF04324 BFD-like [2Fe-2S] binding domain AL552_RS25025 PF13806 Rieske-like [2Fe-2S] domain AL552_RS25030 PF00005 ABC transporter AL552_RS25035 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS25040 PF00005 ABC transporter AL552_RS25050 PF03861 ANTAR domain AL552_RS25050 PF00072 Response regulator receiver domain AL552_RS25055 PF01738 Dienelactone hydrolase family AL552_RS25060 PF00591 Glycosyl transferase family, a/b domain AL552_RS25060 PF02885 Glycosyl transferase family, helical bundle domain AL552_RS25080 PF03222 Tryptophan/tyrosine permease family AL552_RS25100 PF01483 Proprotein convertase P-domain AL552_RS25100 PF00082 Subtilase family AL552_RS25120 PF00072 Response regulator receiver domain AL552_RS25120 PF00486 Transcriptional regulatory protein, C terminal AL552_RS25155 PF04314 Copper chaperone PCu(A)C AL552_RS25160 PF00012 Hsp70 protein AL552_RS25175 PF00676 Dehydrogenase E1 component AL552_RS25180 PF02779 Transketolase, pyrimidine binding domain AL552_RS25180 PF02780 Transketolase, C-terminal domain AL552_RS25215 PF01389 OmpA-like transmembrane domain AL552_RS25215 PF00691 OmpA family AL552_RS25235 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS25240 PF00528 Binding-protein-dependent transport system inner membrane component AL552_RS25245 PF00497 Bacterial extracellular solute-binding proteins, family 3 AL552_RS25250 PF00005 ABC transporter AL552_RS25280 PF02028 BCCT, betaine/carnitine/choline family transporter