AL552_RS00070 SM00470 ParB-like nuclease domain AL552_RS00090 SM00487 DEAD-like helicases superfamily AL552_RS00135 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS00155 SM00990 AL552_RS00155 AL552_RS00170 SM00411 bacterial (prokaryotic) histone like domain AL552_RS00175 SM00411 bacterial (prokaryotic) histone like domain AL552_RS00200 SM00966 SpoVT / AbrB like domain AL552_RS00265 SM00357 Cold shock protein domain AL552_RS00340 SM00267 diguanylate cyclase AL552_RS00375 SM01321 AL552_RS00375 AL552_RS00385 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_RS00405 SM00357 Cold shock protein domain AL552_RS00420 SM00244 prohibitin homologues AL552_RS00435 SM00357 Cold shock protein domain AL552_RS00620 SM00646 AL552_RS00620 AL552_RS00765 SM00363 S4 RNA-binding domain AL552_RS00780 SM00382 ATPases associated with a variety of cellular activities AL552_RS00860 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS00860 SM00732 Likely ribonuclease with RNase H fold. AL552_RS00880 SM00448 cheY-homologous receiver domain AL552_RS00880 SM00862 Transcriptional regulatory protein, C terminal AL552_RS00885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS00885 SM00387 Histidine kinase-like ATPases AL552_RS00885 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS00895 SM00487 DEAD-like helicases superfamily AL552_RS00895 SM00490 helicase superfamily c-terminal domain AL552_RS00905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_RS00905 SM00954 Region found in RelA / SpoT proteins AL552_RS00910 SM01409 AL552_RS00910 AL552_RS00915 SM00072 Guanylate kinase homologues. AL552_RS00920 SM00028 Tetratricopeptide repeats AL552_RS00975 SM00382 ATPases associated with a variety of cellular activities AL552_RS00980 SM00382 ATPases associated with a variety of cellular activities AL552_RS00995 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS01115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS01115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS01115 SM01049 AL552_RS01115 AL552_RS01140 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AL552_RS01140 SM01232 AL552_RS01140 AL552_RS01145 SM00672 Putative lipopolysaccharide-modifying enzyme. AL552_RS01285 SM00382 ATPases associated with a variety of cellular activities AL552_RS01440 SM00984 UDP binding domain AL552_RS01505 SM00382 ATPases associated with a variety of cellular activities AL552_RS01505 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_RS01520 SM00354 helix_turn _helix lactose operon repressor AL552_RS01525 SM00487 DEAD-like helicases superfamily AL552_RS01525 SM00490 helicase superfamily c-terminal domain AL552_RS01540 SM01403 AL552_RS01540 AL552_RS01560 SM01382 AL552_RS01560 AL552_RS01560 SM01383 AL552_RS01560 AL552_RS01575 SM00322 K homology RNA-binding domain AL552_RS01595 SM01374 AL552_RS01595 AL552_RS01600 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL552_RS01665 SM00363 S4 RNA-binding domain AL552_RS01665 SM01390 AL552_RS01665 AL552_RS01670 SM00662 RNA polymerases D AL552_RS01700 SM00487 DEAD-like helicases superfamily AL552_RS01700 SM00490 helicase superfamily c-terminal domain AL552_RS01755 SM00382 ATPases associated with a variety of cellular activities AL552_RS01840 SM00382 ATPases associated with a variety of cellular activities AL552_RS01935 SM00650 Ribosomal RNA adenine dimethylases AL552_RS01955 SM00271 DnaJ molecular chaperone homology domain AL552_RS01975 SM01329 AL552_RS01975 AL552_RS01980 SM00917 LeuA allosteric (dimerisation) domain AL552_RS01995 SM00014 Acid phosphatase homologues AL552_RS02025 SM00267 diguanylate cyclase AL552_RS02030 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS02045 SM00420 helix_turn_helix, Deoxyribose operon repressor AL552_RS02045 SM01134 AL552_RS02045 AL552_RS02060 SM00448 cheY-homologous receiver domain AL552_RS02060 SM00862 Transcriptional regulatory protein, C terminal AL552_RS02065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS02065 SM00387 Histidine kinase-like ATPases AL552_RS02065 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS02080 SM01120 AL552_RS02080 AL552_RS02115 SM00563 Phosphate acyltransferases AL552_RS02155 SM00400 zinc finger AL552_RS02155 SM00493 AL552_RS02155 AL552_RS02155 SM00766 DNA primase DnaG DnaB-binding AL552_RS02180 SM01207 AL552_RS02180 AL552_RS02185 SM00905 Dihydroneopterin aldolase AL552_RS02205 SM00382 ATPases associated with a variety of cellular activities AL552_RS02220 SM00287 Bacterial SH3 domain homologues AL552_RS02235 SM00880 AL552_RS02235 AL552_RS02235 SM01118 AL552_RS02235 AL552_RS02245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS02285 SM00387 Histidine kinase-like ATPases AL552_RS02285 SM00433 TopoisomeraseII AL552_RS02290 SM00434 DNA Topoisomerase IV AL552_RS02295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL552_RS02300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL552_RS02360 SM00749 bacterial OsmY and nodulation domain AL552_RS02450 SM00842 Cell division protein FtsA AL552_RS02455 SM00864 Tubulin/FtsZ family, GTPase domain AL552_RS02455 SM00865 Tubulin/FtsZ family, C-terminal domain AL552_RS02470 SM00957 SecA DEAD-like domain AL552_RS02470 SM00958 SecA preprotein cross-linking domain AL552_RS02485 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AL552_RS02490 SM00851 MGS-like domain AL552_RS02490 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL552_RS02575 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_RS02580 SM00091 PAS domain AL552_RS02580 SM00267 diguanylate cyclase AL552_RS02585 SM00073 Histidine Phosphotransfer domain AL552_RS02585 SM00091 PAS domain AL552_RS02585 SM00387 Histidine kinase-like ATPases AL552_RS02585 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS02585 SM00448 cheY-homologous receiver domain AL552_RS02595 SM00448 cheY-homologous receiver domain AL552_RS02595 SM00862 Transcriptional regulatory protein, C terminal AL552_RS02650 SM00518 AP endonuclease family 2 AL552_RS02660 SM00986 Uracil DNA glycosylase superfamily AL552_RS02660 SM00987 UreE urease accessory protein, C-terminal domain AL552_RS02685 SM00487 DEAD-like helicases superfamily AL552_RS02685 SM00490 helicase superfamily c-terminal domain AL552_RS02730 SM00382 ATPases associated with a variety of cellular activities AL552_RS02750 SM00927 DNA mismatch repair enzyme MutH AL552_RS02765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL552_RS02785 SM01154 AL552_RS02785 AL552_RS02800 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_RS02815 SM00904 Riboflavin kinase AL552_RS02840 SM00226 Low molecular weight phosphatase family AL552_RS02845 SM00448 cheY-homologous receiver domain AL552_RS02845 SM00850 LytTr DNA-binding domain AL552_RS02890 SM00830 Chorismate mutase type II AL552_RS02905 SM00382 ATPases associated with a variety of cellular activities AL552_RS02925 SM00830 Chorismate mutase type II AL552_RS02935 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS02945 SM00363 S4 RNA-binding domain AL552_RS02955 SM00382 ATPases associated with a variety of cellular activities AL552_RS02955 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_RS03035 SM00448 cheY-homologous receiver domain AL552_RS03035 SM00862 Transcriptional regulatory protein, C terminal AL552_RS03040 SM00091 PAS domain AL552_RS03040 SM00387 Histidine kinase-like ATPases AL552_RS03040 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS03070 SM00382 ATPases associated with a variety of cellular activities AL552_RS03115 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS03125 SM00020 Trypsin-like serine protease AL552_RS03140 SM01323 AL552_RS03140 AL552_RS03185 SM00271 DnaJ molecular chaperone homology domain AL552_RS03210 SM00562 AL552_RS03210 AL552_RS03225 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS03245 SM00564 beta-propeller repeat AL552_RS03250 SM00382 ATPases associated with a variety of cellular activities AL552_RS03270 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS03270 SM01240 AL552_RS03270 AL552_RS03285 SM00495 Chitin-binding domain type 3 AL552_RS03420 SM00271 DnaJ molecular chaperone homology domain AL552_RS03465 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS03470 SM01211 AL552_RS03470 AL552_RS03525 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL552_RS03575 SM00861 Transketolase, pyrimidine binding domain AL552_RS03600 SM00981 AL552_RS03600 AL552_RS03625 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL552_RS03625 SM00475 5'-3' exonuclease AL552_RS03635 SM00267 diguanylate cyclase AL552_RS03640 SM00028 Tetratricopeptide repeats AL552_RS03670 SM00382 ATPases associated with a variety of cellular activities AL552_RS03670 SM00930 AL552_RS03670 AL552_RS03680 SM00354 helix_turn _helix lactose operon repressor AL552_RS03690 SM00642 Alpha-amylase domain AL552_RS03700 SM00862 Transcriptional regulatory protein, C terminal AL552_RS03720 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_RS03735 SM00936 Penicillin-binding protein 5, C-terminal domain AL552_RS03790 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS03790 SM01091 Transporter associated domain AL552_RS03805 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_RS03935 SM01400 AL552_RS03935 AL552_RS03955 SM00937 AL552_RS03955 AL552_RS03990 SM00363 S4 RNA-binding domain AL552_RS03995 SM00463 Small MutS-related domain AL552_RS04020 SM01081 Putative carbohydrate binding domain AL552_RS04105 SM00858 AL552_RS04105 AL552_RS04110 SM00260 Two component signalling adaptor domain AL552_RS04110 SM00448 cheY-homologous receiver domain AL552_RS04115 SM00138 Methyltransferase, chemotaxis proteins AL552_RS04160 SM00047 Lysozyme subfamily 2 AL552_RS04230 SM00771 ZipA, C-terminal domain (FtsZ-binding) AL552_RS04260 SM00244 prohibitin homologues AL552_RS04295 SM00938 Nitrogen regulatory protein P-II AL552_RS04300 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS04330 SM00862 Transcriptional regulatory protein, C terminal AL552_RS04335 SM00387 Histidine kinase-like ATPases AL552_RS04355 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL552_RS04465 SM00861 Transketolase, pyrimidine binding domain AL552_RS04480 SM00881 CoA binding domain AL552_RS04500 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS04510 SM00899 AL552_RS04510 AL552_RS04530 SM00836 DALR anticodon binding domain AL552_RS04530 SM01016 Arginyl tRNA synthetase N terminal dom AL552_RS04580 SM00474 3'-5' exonuclease AL552_RS04635 SM00825 Beta-ketoacyl synthase AL552_RS04640 SM00822 AL552_RS04640 AL552_RS04650 SM00825 Beta-ketoacyl synthase AL552_RS04710 SM00563 Phosphate acyltransferases AL552_RS04740 SM01091 Transporter associated domain AL552_RS04745 SM00487 DEAD-like helicases superfamily AL552_RS04745 SM00490 helicase superfamily c-terminal domain AL552_RS04760 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL552_RS04795 SM00382 ATPases associated with a variety of cellular activities AL552_RS04795 SM00448 cheY-homologous receiver domain AL552_RS04800 SM00387 Histidine kinase-like ATPases AL552_RS04800 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS04820 SM00382 ATPases associated with a variety of cellular activities AL552_RS04820 SM00994 ClpX C4-type zinc finger AL552_RS04820 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_RS04825 SM00382 ATPases associated with a variety of cellular activities AL552_RS04825 SM00464 Found in ATP-dependent protease La (LON) AL552_RS04830 SM00411 bacterial (prokaryotic) histone like domain AL552_RS04840 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL552_RS04850 SM01144 AL552_RS04850 AL552_RS04855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_RS04860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_RS04890 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL552_RS04910 SM00563 Phosphate acyltransferases AL552_RS04920 SM00978 AL552_RS04920 AL552_RS04990 SM00344 helix_turn_helix ASNC type AL552_RS05020 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS05020 SM00267 diguanylate cyclase AL552_RS05035 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS05055 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS05055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS05110 SM00487 DEAD-like helicases superfamily AL552_RS05110 SM00490 helicase superfamily c-terminal domain AL552_RS05110 SM00982 AL552_RS05110 AL552_RS05110 SM01058 CarD-like/TRCF domain AL552_RS05125 SM00382 ATPases associated with a variety of cellular activities AL552_RS05140 SM00849 Metallo-beta-lactamase superfamily AL552_RS05145 SM00382 ATPases associated with a variety of cellular activities AL552_RS05175 SM00763 PrkA AAA domain AL552_RS05225 SM00382 ATPases associated with a variety of cellular activities AL552_RS05230 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS05230 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL552_RS05245 SM01276 AL552_RS05245 AL552_RS05295 SM00357 Cold shock protein domain AL552_RS05305 SM00382 ATPases associated with a variety of cellular activities AL552_RS05305 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_RS05310 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS05340 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL552_RS05340 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL552_RS05340 SM00493 AL552_RS05340 AL552_RS05375 SM00354 helix_turn _helix lactose operon repressor AL552_RS05385 SM00448 cheY-homologous receiver domain AL552_RS05385 SM00862 Transcriptional regulatory protein, C terminal AL552_RS05470 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL552_RS05475 SM00382 ATPases associated with a variety of cellular activities AL552_RS05530 SM00028 Tetratricopeptide repeats AL552_RS05565 SM00387 Histidine kinase-like ATPases AL552_RS05565 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS05565 SM00448 cheY-homologous receiver domain AL552_RS05580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS05580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS05625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS05650 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL552_RS05650 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL552_RS05655 SM00344 helix_turn_helix ASNC type AL552_RS05660 SM00843 AL552_RS05660 AL552_RS05670 SM00382 ATPases associated with a variety of cellular activities AL552_RS05695 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_RS05695 SM00876 Biotin and Thiamin Synthesis associated domain AL552_RS05790 SM00528 Domain in histone-like proteins of HNS family AL552_RS05800 SM00382 ATPases associated with a variety of cellular activities AL552_RS05850 SM00052 Putative diguanylate phosphodiesterase AL552_RS05865 SM00840 AL552_RS05865 AL552_RS05940 SM01131 AL552_RS05940 AL552_RS05950 SM00382 ATPases associated with a variety of cellular activities AL552_RS05955 SM00382 ATPases associated with a variety of cellular activities AL552_RS05975 SM00382 ATPases associated with a variety of cellular activities AL552_RS06030 SM00155 Phospholipase D. Active site motifs. AL552_RS06060 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL552_RS06060 SM00382 ATPases associated with a variety of cellular activities AL552_RS06080 SM00382 ATPases associated with a variety of cellular activities AL552_RS06130 SM00387 Histidine kinase-like ATPases AL552_RS06135 SM00448 cheY-homologous receiver domain AL552_RS06135 SM00862 Transcriptional regulatory protein, C terminal AL552_RS06145 SM00487 DEAD-like helicases superfamily AL552_RS06145 SM00490 helicase superfamily c-terminal domain AL552_RS06150 SM00363 S4 RNA-binding domain AL552_RS06205 SM00382 ATPases associated with a variety of cellular activities AL552_RS06305 SM00448 cheY-homologous receiver domain AL552_RS06310 SM00387 Histidine kinase-like ATPases AL552_RS06330 SM00382 ATPases associated with a variety of cellular activities AL552_RS06335 SM00382 ATPases associated with a variety of cellular activities AL552_RS06375 SM00919 Malic enzyme, NAD binding domain AL552_RS06375 SM01274 AL552_RS06375 AL552_RS06465 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS06465 SM00866 AL552_RS06465 AL552_RS06480 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL552_RS06505 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS06535 SM00873 B3/4 domain AL552_RS06535 SM00874 tRNA synthetase B5 domain AL552_RS06535 SM00896 Ferredoxin-fold anticodon binding domain AL552_RS06545 SM00411 bacterial (prokaryotic) histone like domain AL552_RS06580 SM00479 AL552_RS06580 AL552_RS06630 SM00382 ATPases associated with a variety of cellular activities AL552_RS06675 SM00245 tail specific protease AL552_RS06685 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS06685 SM00895 AL552_RS06685 AL552_RS06715 SM01130 AL552_RS06715 AL552_RS06720 SM00382 ATPases associated with a variety of cellular activities AL552_RS06740 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL552_RS06750 SM00382 ATPases associated with a variety of cellular activities AL552_RS06755 SM00382 ATPases associated with a variety of cellular activities AL552_RS06830 SM00052 Putative diguanylate phosphodiesterase AL552_RS06840 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_RS06860 SM01266 AL552_RS06860 AL552_RS06875 SM00387 Histidine kinase-like ATPases AL552_RS06875 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS06875 SM00448 cheY-homologous receiver domain AL552_RS06880 SM00052 Putative diguanylate phosphodiesterase AL552_RS06880 SM00267 diguanylate cyclase AL552_RS06890 SM00028 Tetratricopeptide repeats AL552_RS06970 SM00387 Histidine kinase-like ATPases AL552_RS06970 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS06975 SM00448 cheY-homologous receiver domain AL552_RS06975 SM00862 Transcriptional regulatory protein, C terminal AL552_RS06985 SM00822 AL552_RS06985 AL552_RS06990 SM01236 AL552_RS06990 AL552_RS07015 SM00382 ATPases associated with a variety of cellular activities AL552_RS07020 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_RS07020 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS07025 SM00479 AL552_RS07025 AL552_RS07085 SM00091 PAS domain AL552_RS07085 SM00387 Histidine kinase-like ATPases AL552_RS07090 SM00448 cheY-homologous receiver domain AL552_RS07100 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS07100 SM00871 Bacterial transcription activator, effector binding domain AL552_RS07115 SM01350 AL552_RS07115 AL552_RS07140 SM00382 ATPases associated with a variety of cellular activities AL552_RS07165 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS07270 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_RS07325 SM00382 ATPases associated with a variety of cellular activities AL552_RS07430 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS07430 SM00895 AL552_RS07430 AL552_RS07465 SM00020 Trypsin-like serine protease AL552_RS07465 SM00495 Chitin-binding domain type 3 AL552_RS07490 SM00028 Tetratricopeptide repeats AL552_RS07490 SM00267 diguanylate cyclase AL552_RS07540 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AL552_RS07545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS07575 SM00382 ATPases associated with a variety of cellular activities AL552_RS07590 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS07625 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS07645 SM00382 ATPases associated with a variety of cellular activities AL552_RS07655 SM00945 ProQ/FINO family AL552_RS07660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL552_RS07660 SM00245 tail specific protease AL552_RS07695 SM00981 AL552_RS07695 AL552_RS07705 SM00382 ATPases associated with a variety of cellular activities AL552_RS07750 SM00387 Histidine kinase-like ATPases AL552_RS07750 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS07750 SM00448 cheY-homologous receiver domain AL552_RS07755 SM00897 FIST N domain AL552_RS07755 SM01204 AL552_RS07755 AL552_RS07805 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_RS07805 SM00419 helix_turn_helix, cAMP Regulatory protein AL552_RS07835 SM00382 ATPases associated with a variety of cellular activities AL552_RS07870 SM00248 ankyrin repeats AL552_RS07885 SM00860 SMI1 / KNR4 family AL552_RS08030 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS08065 SM00382 ATPases associated with a variety of cellular activities AL552_RS08075 SM00387 Histidine kinase-like ATPases AL552_RS08075 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS08080 SM00382 ATPases associated with a variety of cellular activities AL552_RS08080 SM00448 cheY-homologous receiver domain AL552_RS08095 SM00382 ATPases associated with a variety of cellular activities AL552_RS08105 SM00852 Probable molybdopterin binding domain AL552_RS08120 SM01144 AL552_RS08120 AL552_RS08150 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS08165 SM00267 diguanylate cyclase AL552_RS08170 SM00448 cheY-homologous receiver domain AL552_RS08305 SM00382 ATPases associated with a variety of cellular activities AL552_RS08305 SM00487 DEAD-like helicases superfamily AL552_RS08305 SM00490 helicase superfamily c-terminal domain AL552_RS08305 SM00847 Helicase associated domain (HA2) Add an annotation AL552_RS08340 SM00479 AL552_RS08340 AL552_RS08345 SM00267 diguanylate cyclase AL552_RS08345 SM01079 AL552_RS08345 AL552_RS08385 SM00382 ATPases associated with a variety of cellular activities AL552_RS08390 SM00382 ATPases associated with a variety of cellular activities AL552_RS08415 SM00382 ATPases associated with a variety of cellular activities AL552_RS08440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_RS08445 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AL552_RS08475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_RS08485 SM00448 cheY-homologous receiver domain AL552_RS08490 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_RS08490 SM00387 Histidine kinase-like ATPases AL552_RS08515 SM00267 diguanylate cyclase AL552_RS08530 SM00420 helix_turn_helix, Deoxyribose operon repressor AL552_RS08530 SM01134 AL552_RS08530 AL552_RS08935 SM00901 AL552_RS08935 AL552_RS09420 SM00255 Toll - interleukin 1 - resistance AL552_RS09530 SM00901 AL552_RS09530 AL552_RS09895 SM00091 PAS domain AL552_RS09895 SM00382 ATPases associated with a variety of cellular activities AL552_RS09930 SM00387 Histidine kinase-like ATPases AL552_RS09930 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS09930 SM00448 cheY-homologous receiver domain AL552_RS09955 SM00052 Putative diguanylate phosphodiesterase AL552_RS09970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS09970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS09985 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS10010 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_RS10010 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS10015 SM00479 AL552_RS10015 AL552_RS10020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS10020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS10030 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_RS10035 SM00421 helix_turn_helix, Lux Regulon AL552_RS10035 SM00448 cheY-homologous receiver domain AL552_RS10040 SM00387 Histidine kinase-like ATPases AL552_RS10040 SM01049 AL552_RS10040 AL552_RS10070 SM00849 Metallo-beta-lactamase superfamily AL552_RS10160 SM00434 DNA Topoisomerase IV AL552_RS10185 SM00852 Probable molybdopterin binding domain AL552_RS10240 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL552_RS10240 SM00465 GIY-YIG type nucleases (URI domain) AL552_RS10245 SM00421 helix_turn_helix, Lux Regulon AL552_RS10245 SM00448 cheY-homologous receiver domain AL552_RS10250 SM00486 DNA polymerase type-B family AL552_RS10260 SM00841 Elongation factor P, C-terminal AL552_RS10260 SM01185 AL552_RS10260 AL552_RS10270 SM00363 S4 RNA-binding domain AL552_RS10285 SM00481 DNA polymerase alpha chain like domain AL552_RS10325 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_RS10325 SM00419 helix_turn_helix, cAMP Regulatory protein AL552_RS10350 SM00387 Histidine kinase-like ATPases AL552_RS10350 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS10350 SM00448 cheY-homologous receiver domain AL552_RS10400 SM00052 Putative diguanylate phosphodiesterase AL552_RS10400 SM00091 PAS domain AL552_RS10405 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_RS10410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS10410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS10420 SM00448 cheY-homologous receiver domain AL552_RS10420 SM00862 Transcriptional regulatory protein, C terminal AL552_RS10425 SM00387 Histidine kinase-like ATPases AL552_RS10425 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS10475 SM00382 ATPases associated with a variety of cellular activities AL552_RS10540 SM00421 helix_turn_helix, Lux Regulon AL552_RS10540 SM00448 cheY-homologous receiver domain AL552_RS10545 SM00387 Histidine kinase-like ATPases AL552_RS10545 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS10560 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS10600 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL552_RS10605 SM00028 Tetratricopeptide repeats AL552_RS10615 SM00411 bacterial (prokaryotic) histone like domain AL552_RS10620 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS10635 SM00822 AL552_RS10635 AL552_RS10650 SM00481 DNA polymerase alpha chain like domain AL552_RS10655 SM00260 Two component signalling adaptor domain AL552_RS10655 SM00448 cheY-homologous receiver domain AL552_RS10730 SM00825 Beta-ketoacyl synthase AL552_RS10740 SM00822 AL552_RS10740 AL552_RS10745 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL552_RS10775 SM00363 S4 RNA-binding domain AL552_RS10780 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS10795 SM00226 Low molecular weight phosphatase family AL552_RS10845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS10870 SM00267 diguanylate cyclase AL552_RS10875 SM00642 Alpha-amylase domain AL552_RS10880 SM00382 ATPases associated with a variety of cellular activities AL552_RS10925 SM00382 ATPases associated with a variety of cellular activities AL552_RS10930 SM00382 ATPases associated with a variety of cellular activities AL552_RS10965 SM00852 Probable molybdopterin binding domain AL552_RS10970 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_RS10985 SM00382 ATPases associated with a variety of cellular activities AL552_RS10985 SM00448 cheY-homologous receiver domain AL552_RS10990 SM00487 DEAD-like helicases superfamily AL552_RS10990 SM00490 helicase superfamily c-terminal domain AL552_RS11020 SM00900 AL552_RS11020 AL552_RS11030 SM00478 endonuclease III AL552_RS11030 SM00525 AL552_RS11030 AL552_RS11055 SM00479 AL552_RS11055 AL552_RS11105 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL552_RS11160 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL552_RS11160 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL552_RS11160 SM00493 AL552_RS11160 AL552_RS11185 SM00870 AL552_RS11185 AL552_RS11205 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_RS11215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS11215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS11240 SM00098 Alkaline phosphatase homologues AL552_RS11305 SM00493 AL552_RS11305 AL552_RS11315 SM00382 ATPases associated with a variety of cellular activities AL552_RS11335 SM00448 cheY-homologous receiver domain AL552_RS11385 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL552_RS11395 SM00825 Beta-ketoacyl synthase AL552_RS11445 SM00463 Small MutS-related domain AL552_RS11450 SM00855 Phosphoglycerate mutase family AL552_RS11540 SM00382 ATPases associated with a variety of cellular activities AL552_RS11550 SM00260 Two component signalling adaptor domain AL552_RS11555 SM00260 Two component signalling adaptor domain AL552_RS11565 SM00448 cheY-homologous receiver domain AL552_RS11570 SM00073 Histidine Phosphotransfer domain AL552_RS11570 SM00260 Two component signalling adaptor domain AL552_RS11570 SM00387 Histidine kinase-like ATPases AL552_RS11570 SM01231 AL552_RS11570 AL552_RS11580 SM00448 cheY-homologous receiver domain AL552_RS11595 SM00382 ATPases associated with a variety of cellular activities AL552_RS11595 SM00962 SRP54-type protein, GTPase domain AL552_RS11655 SM00382 ATPases associated with a variety of cellular activities AL552_RS11680 SM00382 ATPases associated with a variety of cellular activities AL552_RS11680 SM00448 cheY-homologous receiver domain AL552_RS11685 SM00387 Histidine kinase-like ATPases AL552_RS11685 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS11690 SM00382 ATPases associated with a variety of cellular activities AL552_RS11785 SM01130 AL552_RS11785 AL552_RS11810 SM00028 Tetratricopeptide repeats AL552_RS11895 SM00479 AL552_RS11895 AL552_RS11910 SM00849 Metallo-beta-lactamase superfamily AL552_RS11915 SM00257 Lysin motif AL552_RS11930 SM00938 Nitrogen regulatory protein P-II AL552_RS11940 SM00977 TilS substrate C-terminal domain AL552_RS11950 SM00481 DNA polymerase alpha chain like domain AL552_RS11980 SM00935 Outer membrane protein (OmpH-like) AL552_RS11990 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL552_RS12090 SM00849 Metallo-beta-lactamase superfamily AL552_RS12155 SM00495 Chitin-binding domain type 3 AL552_RS12155 SM00636 AL552_RS12155 AL552_RS12170 SM00487 DEAD-like helicases superfamily AL552_RS12170 SM00490 helicase superfamily c-terminal domain AL552_RS12210 SM00900 AL552_RS12210 AL552_RS12270 SM00464 Found in ATP-dependent protease La (LON) AL552_RS12300 SM00267 diguanylate cyclase AL552_RS12315 SM00925 MltA specific insert domain AL552_RS12420 SM00420 helix_turn_helix, Deoxyribose operon repressor AL552_RS12420 SM01134 AL552_RS12420 AL552_RS12450 SM00354 helix_turn _helix lactose operon repressor AL552_RS12455 SM00479 AL552_RS12455 AL552_RS12460 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS12495 SM00354 helix_turn _helix lactose operon repressor AL552_RS12500 SM01038 Beta galactosidase small chain AL552_RS12530 SM00028 Tetratricopeptide repeats AL552_RS12580 SM00858 AL552_RS12580 AL552_RS12585 SM00382 ATPases associated with a variety of cellular activities AL552_RS12600 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS12620 SM00838 Elongation factor G C-terminus AL552_RS12620 SM00889 Elongation factor G, domain IV AL552_RS12625 SM00382 ATPases associated with a variety of cellular activities AL552_RS12655 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AL552_RS12660 SM01133 AL552_RS12660 AL552_RS12720 SM00052 Putative diguanylate phosphodiesterase AL552_RS12720 SM00091 PAS domain AL552_RS12720 SM00267 diguanylate cyclase AL552_RS12740 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_RS12750 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS12750 SM00322 K homology RNA-binding domain AL552_RS12755 SM01387 AL552_RS12755 AL552_RS12775 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS12815 SM00382 ATPases associated with a variety of cellular activities AL552_RS12825 SM01103 AL552_RS12825 AL552_RS12850 SM00363 S4 RNA-binding domain AL552_RS12890 SM00091 PAS domain AL552_RS12890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS12890 SM00387 Histidine kinase-like ATPases AL552_RS12890 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS12890 SM00448 cheY-homologous receiver domain AL552_RS12910 SM00382 ATPases associated with a variety of cellular activities AL552_RS12915 SM00382 ATPases associated with a variety of cellular activities AL552_RS12935 SM01068 Putative carbohydrate binding domain AL552_RS12945 SM00382 ATPases associated with a variety of cellular activities AL552_RS12965 SM00938 Nitrogen regulatory protein P-II AL552_RS12990 SM00487 DEAD-like helicases superfamily AL552_RS12990 SM00490 helicase superfamily c-terminal domain AL552_RS12990 SM00847 Helicase associated domain (HA2) Add an annotation AL552_RS13045 SM00382 ATPases associated with a variety of cellular activities AL552_RS13055 SM00947 Carbonic anhydrase AL552_RS13085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS13085 SM00895 AL552_RS13085 AL552_RS13090 SM00644 AL552_RS13090 AL552_RS13155 SM00382 ATPases associated with a variety of cellular activities AL552_RS13155 SM00962 SRP54-type protein, GTPase domain AL552_RS13155 SM00963 SRP54-type protein, helical bundle domain AL552_RS13165 SM01091 Transporter associated domain AL552_RS13195 SM00829 Enoylreductase AL552_RS13280 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL552_RS13290 SM00382 ATPases associated with a variety of cellular activities AL552_RS13300 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL552_RS13300 SM00534 ATPase domain of DNA mismatch repair MUTS family AL552_RS13310 SM00257 Lysin motif AL552_RS13345 SM01192 AL552_RS13345 AL552_RS13345 SM01193 AL552_RS13345 AL552_RS13360 SM00954 Region found in RelA / SpoT proteins AL552_RS13380 SM00073 Histidine Phosphotransfer domain AL552_RS13380 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS13380 SM00387 Histidine kinase-like ATPases AL552_RS13380 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS13380 SM00448 cheY-homologous receiver domain AL552_RS13405 SM00358 Double-stranded RNA binding motif AL552_RS13405 SM00535 Ribonuclease III family AL552_RS13415 SM00838 Elongation factor G C-terminus AL552_RS13555 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_RS13570 SM00861 Transketolase, pyrimidine binding domain AL552_RS13590 SM00731 SprT homologues. AL552_RS13615 SM00732 Likely ribonuclease with RNase H fold. AL552_RS13625 SM00382 ATPases associated with a variety of cellular activities AL552_RS13645 SM01152 AL552_RS13645 AL552_RS13660 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_RS13680 SM00478 endonuclease III AL552_RS13680 SM00525 AL552_RS13680 AL552_RS13730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS13730 SM01049 AL552_RS13730 AL552_RS13800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_RS13835 SM00495 Chitin-binding domain type 3 AL552_RS13890 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_RS13935 SM00563 Phosphate acyltransferases AL552_RS13970 SM00382 ATPases associated with a variety of cellular activities AL552_RS13980 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS13995 SM00382 ATPases associated with a variety of cellular activities AL552_RS14025 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS14025 SM00924 MgtE intracellular N domain AL552_RS14055 SM00487 DEAD-like helicases superfamily AL552_RS14055 SM00490 helicase superfamily c-terminal domain AL552_RS14060 SM00670 Large family of predicted nucleotide-binding domains AL552_RS14080 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS14150 SM00382 ATPases associated with a variety of cellular activities AL552_RS14155 SM00028 Tetratricopeptide repeats AL552_RS14165 SM00965 Secretin and TonB N terminus short domain AL552_RS14185 SM00052 Putative diguanylate phosphodiesterase AL552_RS14185 SM00267 diguanylate cyclase AL552_RS14195 SM00421 helix_turn_helix, Lux Regulon AL552_RS14420 SM00965 Secretin and TonB N terminus short domain AL552_RS14490 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL552_RS14530 SM00919 Malic enzyme, NAD binding domain AL552_RS14530 SM01274 AL552_RS14530 AL552_RS14550 SM00838 Elongation factor G C-terminus AL552_RS14550 SM00889 Elongation factor G, domain IV AL552_RS14590 SM00320 WD40 repeats AL552_RS14630 SM00382 ATPases associated with a variety of cellular activities AL552_RS14655 SM00100 Cyclic nucleotide-monophosphate binding domain AL552_RS14655 SM00419 helix_turn_helix, cAMP Regulatory protein AL552_RS14660 SM01150 AL552_RS14660 AL552_RS14705 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL552_RS14710 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS14710 SM00357 Cold shock protein domain AL552_RS14710 SM00955 AL552_RS14710 AL552_RS14725 SM00671 Sel1-like repeats. AL552_RS14735 SM00788 Adenylosuccinate synthetase AL552_RS14745 SM00244 prohibitin homologues AL552_RS14750 SM00244 prohibitin homologues AL552_RS14770 SM00853 MutL C terminal dimerisation domain AL552_RS14770 SM01340 AL552_RS14770 AL552_RS14775 SM00257 Lysin motif AL552_RS14775 SM00646 AL552_RS14775 AL552_RS14855 SM00479 AL552_RS14855 AL552_RS14885 SM00450 Rhodanese Homology Domain AL552_RS14900 SM00971 Serine acetyltransferase, N-terminal AL552_RS14955 SM00841 Elongation factor P, C-terminal AL552_RS14955 SM01185 AL552_RS14955 AL552_RS14980 SM00883 Chaperonin 10 Kd subunit AL552_RS15005 SM00448 cheY-homologous receiver domain AL552_RS15005 SM00862 Transcriptional regulatory protein, C terminal AL552_RS15010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS15010 SM00387 Histidine kinase-like ATPases AL552_RS15010 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS15045 SM00421 helix_turn_helix, Lux Regulon AL552_RS15045 SM00448 cheY-homologous receiver domain AL552_RS15050 SM01091 Transporter associated domain AL552_RS15080 SM00387 Histidine kinase-like ATPases AL552_RS15080 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS15080 SM00448 cheY-homologous receiver domain AL552_RS15095 SM00479 AL552_RS15095 AL552_RS15115 SM00878 Biotin carboxylase C-terminal domain AL552_RS15145 SM00382 ATPases associated with a variety of cellular activities AL552_RS15220 SM00862 Transcriptional regulatory protein, C terminal AL552_RS15225 SM00422 helix_turn_helix, mercury resistance AL552_RS15235 SM00798 AICARFT/IMPCHase bienzyme AL552_RS15235 SM00851 MGS-like domain AL552_RS15245 SM01209 AL552_RS15245 AL552_RS15245 SM01210 AL552_RS15245 AL552_RS15255 SM00411 bacterial (prokaryotic) histone like domain AL552_RS15260 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS15275 SM00986 Uracil DNA glycosylase superfamily AL552_RS15275 SM00987 UreE urease accessory protein, C-terminal domain AL552_RS15295 SM00663 RNA polymerase I subunit A N-terminus AL552_RS15320 SM00649 Ribosomal protein L11/L12 AL552_RS15325 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL552_RS15325 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL552_RS15385 SM00155 Phospholipase D. Active site motifs. AL552_RS15445 SM00360 RNA recognition motif AL552_RS15510 SM00487 DEAD-like helicases superfamily AL552_RS15545 SM00052 Putative diguanylate phosphodiesterase AL552_RS15545 SM00267 diguanylate cyclase AL552_RS15560 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS15575 SM00267 diguanylate cyclase AL552_RS15625 SM00563 Phosphate acyltransferases AL552_RS15650 SM00450 Rhodanese Homology Domain AL552_RS15665 SM00382 ATPases associated with a variety of cellular activities AL552_RS15670 SM00382 ATPases associated with a variety of cellular activities AL552_RS15670 SM00962 SRP54-type protein, GTPase domain AL552_RS15670 SM00963 SRP54-type protein, helical bundle domain AL552_RS15735 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_RS15740 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_RS15745 SM00052 Putative diguanylate phosphodiesterase AL552_RS15775 SM01144 AL552_RS15775 AL552_RS15780 SM00052 Putative diguanylate phosphodiesterase AL552_RS15780 SM00267 diguanylate cyclase AL552_RS15780 SM00897 FIST N domain AL552_RS15780 SM01204 AL552_RS15780 AL552_RS15815 SM01219 AL552_RS15815 AL552_RS15840 SM00028 Tetratricopeptide repeats AL552_RS15905 SM00357 Cold shock protein domain AL552_RS15905 SM00382 ATPases associated with a variety of cellular activities AL552_RS15905 SM00959 Rho termination factor, N-terminal domain AL552_RS15915 SM00487 DEAD-like helicases superfamily AL552_RS15915 SM00490 helicase superfamily c-terminal domain AL552_RS15935 SM00341 Helicase and RNase D C-terminal AL552_RS15935 SM00487 DEAD-like helicases superfamily AL552_RS15935 SM00490 helicase superfamily c-terminal domain AL552_RS15935 SM00956 AL552_RS15935 AL552_RS15945 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS16010 SM00876 Biotin and Thiamin Synthesis associated domain AL552_RS16120 SM00829 Enoylreductase AL552_RS16155 SM00836 DALR anticodon binding domain AL552_RS16160 SM00642 Alpha-amylase domain AL552_RS16185 SM00387 Histidine kinase-like ATPases AL552_RS16185 SM00433 TopoisomeraseII AL552_RS16195 SM00480 DNA polymerase III beta subunit AL552_RS16200 SM00382 ATPases associated with a variety of cellular activities AL552_RS16200 SM00760 Bacterial dnaA protein helix-turn-helix domain AL552_RS16210 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS16210 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL552_RS16220 SM00382 ATPases associated with a variety of cellular activities AL552_RS16235 SM01234 AL552_RS16235 AL552_RS16345 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS16360 SM01228 AL552_RS16360 AL552_RS16375 SM00470 ParB-like nuclease domain AL552_RS16415 SM00382 ATPases associated with a variety of cellular activities AL552_RS16435 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS16475 SM00382 ATPases associated with a variety of cellular activities AL552_RS16485 SM00563 Phosphate acyltransferases AL552_RS16555 SM00257 Lysin motif AL552_RS16580 SM01001 AIR carboxylase AL552_RS16720 SM00382 ATPases associated with a variety of cellular activities AL552_RS16755 SM00736 Dystroglycan-type cadherin-like domains. AL552_RS16775 SM00220 Serine/Threonine protein kinases, catalytic domain AL552_RS16780 SM00354 helix_turn _helix lactose operon repressor AL552_RS16845 SM00344 helix_turn_helix ASNC type AL552_RS16850 SM00052 Putative diguanylate phosphodiesterase AL552_RS16850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_RS16850 SM00091 PAS domain AL552_RS16850 SM00267 diguanylate cyclase AL552_RS16890 SM00382 ATPases associated with a variety of cellular activities AL552_RS16895 SM00749 bacterial OsmY and nodulation domain AL552_RS16915 SM00046 Diacylglycerol kinase catalytic domain (presumed) AL552_RS16915 SM00195 Dual specificity phosphatase, catalytic domain AL552_RS16915 SM00404 Protein tyrosine phosphatase, catalytic domain motif AL552_RS16950 SM00052 Putative diguanylate phosphodiesterase AL552_RS16950 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_RS16950 SM00091 PAS domain AL552_RS16950 SM00267 diguanylate cyclase AL552_RS17010 SM01004 Delta-aminolevulinic acid dehydratase AL552_RS17025 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL552_RS17025 SM00474 3'-5' exonuclease AL552_RS17025 SM00475 5'-3' exonuclease AL552_RS17025 SM00482 DNA polymerase A domain AL552_RS17065 SM00729 Elongator protein 3, MiaB family, Radical SAM AL552_RS17075 SM00052 Putative diguanylate phosphodiesterase AL552_RS17075 SM00267 diguanylate cyclase AL552_RS17075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS17080 SM00382 ATPases associated with a variety of cellular activities AL552_RS17080 SM00448 cheY-homologous receiver domain AL552_RS17085 SM00091 PAS domain AL552_RS17085 SM00387 Histidine kinase-like ATPases AL552_RS17085 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS17095 SM01230 AL552_RS17095 AL552_RS17170 SM00822 AL552_RS17170 AL552_RS17205 SM00422 helix_turn_helix, mercury resistance AL552_RS17255 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS17280 SM00382 ATPases associated with a variety of cellular activities AL552_RS17290 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_RS17290 SM00091 PAS domain AL552_RS17290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS17305 SM00052 Putative diguanylate phosphodiesterase AL552_RS17305 SM00267 diguanylate cyclase AL552_RS17310 SM00487 DEAD-like helicases superfamily AL552_RS17310 SM00490 helicase superfamily c-terminal domain AL552_RS17315 SM00357 Cold shock protein domain AL552_RS17315 SM00955 AL552_RS17315 AL552_RS17320 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS17375 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS17395 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS17400 SM00382 ATPases associated with a variety of cellular activities AL552_RS17405 SM00052 Putative diguanylate phosphodiesterase AL552_RS17410 SM00346 helix_turn_helix isocitrate lyase regulation AL552_RS17425 SM00487 DEAD-like helicases superfamily AL552_RS17425 SM00490 helicase superfamily c-terminal domain AL552_RS17430 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL552_RS17450 SM00357 Cold shock protein domain AL552_RS17455 SM00316 Ribosomal protein S1-like RNA-binding domain AL552_RS17455 SM00357 Cold shock protein domain AL552_RS17455 SM00955 AL552_RS17455 AL552_RS17475 SM00487 DEAD-like helicases superfamily AL552_RS17475 SM00490 helicase superfamily c-terminal domain AL552_RS17515 SM00829 Enoylreductase AL552_RS17555 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS17570 SM00382 ATPases associated with a variety of cellular activities AL552_RS17590 SM00862 Transcriptional regulatory protein, C terminal AL552_RS17725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS17725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS17735 SM00382 ATPases associated with a variety of cellular activities AL552_RS17755 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS17755 SM00267 diguanylate cyclase AL552_RS17765 SM00357 Cold shock protein domain AL552_RS17770 SM01322 AL552_RS17770 AL552_RS17860 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS17920 SM00052 Putative diguanylate phosphodiesterase AL552_RS17920 SM00267 diguanylate cyclase AL552_RS17960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS17960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS17985 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS17990 SM00481 DNA polymerase alpha chain like domain AL552_RS18030 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_RS18040 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS18065 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS18065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS18075 SM00382 ATPases associated with a variety of cellular activities AL552_RS18095 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS18140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL552_RS18140 SM00267 diguanylate cyclase AL552_RS18185 SM00382 ATPases associated with a variety of cellular activities AL552_RS18210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_RS18215 SM00642 Alpha-amylase domain AL552_RS18220 SM00422 helix_turn_helix, mercury resistance AL552_RS18255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS18255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS18290 SM00260 Two component signalling adaptor domain AL552_RS18290 SM00448 cheY-homologous receiver domain AL552_RS18340 SM00382 ATPases associated with a variety of cellular activities AL552_RS18425 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS18460 SM00382 ATPases associated with a variety of cellular activities AL552_RS18520 SM01022 AL552_RS18520 AL552_RS18530 SM00829 Enoylreductase AL552_RS18540 SM01060 AL552_RS18540 AL552_RS18565 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS18590 SM00849 Metallo-beta-lactamase superfamily AL552_RS18610 SM00052 Putative diguanylate phosphodiesterase AL552_RS18660 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS18660 SM00866 AL552_RS18660 AL552_RS18685 SM00382 ATPases associated with a variety of cellular activities AL552_RS18720 SM00155 Phospholipase D. Active site motifs. AL552_RS18730 SM01022 AL552_RS18730 AL552_RS18735 SM00028 Tetratricopeptide repeats AL552_RS18745 SM00422 helix_turn_helix, mercury resistance AL552_RS18770 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AL552_RS18780 SM00838 Elongation factor G C-terminus AL552_RS18780 SM00889 Elongation factor G, domain IV AL552_RS18820 SM00382 ATPases associated with a variety of cellular activities AL552_RS18890 SM00420 helix_turn_helix, Deoxyribose operon repressor AL552_RS18890 SM01134 AL552_RS18890 AL552_RS18935 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS18980 SM00883 Chaperonin 10 Kd subunit AL552_RS18985 SM00450 Rhodanese Homology Domain AL552_RS19000 SM01240 AL552_RS19000 AL552_RS19075 SM00858 AL552_RS19075 AL552_RS19150 SM00631 AL552_RS19150 AL552_RS19180 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS19180 SM00866 AL552_RS19180 AL552_RS19190 SM00382 ATPases associated with a variety of cellular activities AL552_RS19215 SM00354 helix_turn _helix lactose operon repressor AL552_RS19255 SM01057 Eukaryotic-type carbonic anhydrase AL552_RS19315 SM01266 AL552_RS19315 AL552_RS19350 SM00267 diguanylate cyclase AL552_RS19360 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS19365 SM00267 diguanylate cyclase AL552_RS19365 SM01079 AL552_RS19365 AL552_RS19455 SM00267 diguanylate cyclase AL552_RS19465 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_RS19465 SM00387 Histidine kinase-like ATPases AL552_RS19490 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS19515 SM00849 Metallo-beta-lactamase superfamily AL552_RS19555 SM00382 ATPases associated with a variety of cellular activities AL552_RS19630 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS19630 SM00387 Histidine kinase-like ATPases AL552_RS19630 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS19635 SM00448 cheY-homologous receiver domain AL552_RS19635 SM00862 Transcriptional regulatory protein, C terminal AL552_RS19735 SM00382 ATPases associated with a variety of cellular activities AL552_RS19765 SM00014 Acid phosphatase homologues AL552_RS19815 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS19890 SM00506 Appr-1"-p processing enzyme AL552_RS19945 SM00495 Chitin-binding domain type 3 AL552_RS19950 SM00344 helix_turn_helix ASNC type AL552_RS19980 SM00829 Enoylreductase AL552_RS19995 SM00267 diguanylate cyclase AL552_RS20015 SM00849 Metallo-beta-lactamase superfamily AL552_RS20040 SM00267 diguanylate cyclase AL552_RS20060 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins AL552_RS20060 SM00495 Chitin-binding domain type 3 AL552_RS20060 SM00636 AL552_RS20060 AL552_RS20105 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS20105 SM01009 AlkA N-terminal domain AL552_RS20155 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS20190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS20190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS20190 SM01049 AL552_RS20190 AL552_RS20205 SM00448 cheY-homologous receiver domain AL552_RS20205 SM00850 LytTr DNA-binding domain AL552_RS20210 SM00387 Histidine kinase-like ATPases AL552_RS20230 SM00382 ATPases associated with a variety of cellular activities AL552_RS20260 SM00387 Histidine kinase-like ATPases AL552_RS20260 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS20260 SM00448 cheY-homologous receiver domain AL552_RS20280 SM00382 ATPases associated with a variety of cellular activities AL552_RS20285 SM00382 ATPases associated with a variety of cellular activities AL552_RS20305 SM00470 ParB-like nuclease domain AL552_RS20385 SM00382 ATPases associated with a variety of cellular activities AL552_RS20390 SM00052 Putative diguanylate phosphodiesterase AL552_RS20390 SM00267 diguanylate cyclase AL552_RS20405 SM00448 cheY-homologous receiver domain AL552_RS20410 SM00387 Histidine kinase-like ATPases AL552_RS20420 SM00421 helix_turn_helix, Lux Regulon AL552_RS20425 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS20450 SM00360 RNA recognition motif AL552_RS20465 SM00344 helix_turn_helix ASNC type AL552_RS20475 SM00382 ATPases associated with a variety of cellular activities AL552_RS20485 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS20515 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS20520 SM00829 Enoylreductase AL552_RS20575 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_RS20585 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS20585 SM00871 Bacterial transcription activator, effector binding domain AL552_RS20600 SM00382 ATPases associated with a variety of cellular activities AL552_RS20655 SM00448 cheY-homologous receiver domain AL552_RS20655 SM00862 Transcriptional regulatory protein, C terminal AL552_RS20660 SM00387 Histidine kinase-like ATPases AL552_RS20720 SM00382 ATPases associated with a variety of cellular activities AL552_RS20770 SM00857 Resolvase, N terminal domain AL552_RS20775 SM00354 helix_turn _helix lactose operon repressor AL552_RS20825 SM00642 Alpha-amylase domain AL552_RS20835 SM00642 Alpha-amylase domain AL552_RS20840 SM00671 Sel1-like repeats. AL552_RS20860 SM00966 SpoVT / AbrB like domain AL552_RS20900 SM00421 helix_turn_helix, Lux Regulon AL552_RS20920 SM00642 Alpha-amylase domain AL552_RS20930 SM00642 Alpha-amylase domain AL552_RS20980 SM00226 Low molecular weight phosphatase family AL552_RS21015 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. AL552_RS21030 SM00450 Rhodanese Homology Domain AL552_RS21045 SM00936 Penicillin-binding protein 5, C-terminal domain AL552_RS21050 SM00642 Alpha-amylase domain AL552_RS21055 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS21190 SM00422 helix_turn_helix, mercury resistance AL552_RS21320 SM00382 ATPases associated with a variety of cellular activities AL552_RS21355 SM00020 Trypsin-like serine protease AL552_RS21375 SM00481 DNA polymerase alpha chain like domain AL552_RS21415 SM00448 cheY-homologous receiver domain AL552_RS21415 SM00862 Transcriptional regulatory protein, C terminal AL552_RS21420 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS21435 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS21440 SM00052 Putative diguanylate phosphodiesterase AL552_RS21440 SM00267 diguanylate cyclase AL552_RS21450 SM00829 Enoylreductase AL552_RS21455 SM01057 Eukaryotic-type carbonic anhydrase AL552_RS21490 SM00382 ATPases associated with a variety of cellular activities AL552_RS21525 SM00587 ZnF_C4 abd HLH domain containing kinases domain AL552_RS21560 SM00382 ATPases associated with a variety of cellular activities AL552_RS21580 SM00267 diguanylate cyclase AL552_RS21585 SM00028 Tetratricopeptide repeats AL552_RS21610 SM00422 helix_turn_helix, mercury resistance AL552_RS21620 SM00257 Lysin motif AL552_RS21630 SM00487 DEAD-like helicases superfamily AL552_RS21630 SM00490 helicase superfamily c-terminal domain AL552_RS21660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS21660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS21680 SM00382 ATPases associated with a variety of cellular activities AL552_RS21685 SM00267 diguanylate cyclase AL552_RS21695 SM00028 Tetratricopeptide repeats AL552_RS21695 SM00327 von Willebrand factor (vWF) type A domain AL552_RS21700 SM00327 von Willebrand factor (vWF) type A domain AL552_RS21725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS21725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS21740 SM00421 helix_turn_helix, Lux Regulon AL552_RS21750 SM00382 ATPases associated with a variety of cellular activities AL552_RS21775 SM00382 ATPases associated with a variety of cellular activities AL552_RS21785 SM00382 ATPases associated with a variety of cellular activities AL552_RS21830 SM00421 helix_turn_helix, Lux Regulon AL552_RS21850 SM00870 AL552_RS21850 AL552_RS21855 SM00788 Adenylosuccinate synthetase AL552_RS21905 SM00344 helix_turn_helix ASNC type AL552_RS21930 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS21945 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS21960 SM00829 Enoylreductase AL552_RS21990 SM00487 DEAD-like helicases superfamily AL552_RS21990 SM00490 helicase superfamily c-terminal domain AL552_RS22035 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS22035 SM00871 Bacterial transcription activator, effector binding domain AL552_RS22070 SM00822 AL552_RS22070 AL552_RS22090 SM00354 helix_turn _helix lactose operon repressor AL552_RS22105 SM00640 Glycosyl hydrolases family 32 AL552_RS22125 SM00936 Penicillin-binding protein 5, C-terminal domain AL552_RS22155 SM00357 Cold shock protein domain AL552_RS22200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS22200 SM00387 Histidine kinase-like ATPases AL552_RS22200 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS22205 SM00448 cheY-homologous receiver domain AL552_RS22205 SM00862 Transcriptional regulatory protein, C terminal AL552_RS22210 SM01065 Starch binding domain AL552_RS22250 SM00563 Phosphate acyltransferases AL552_RS22260 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS22265 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL552_RS22280 SM00924 MgtE intracellular N domain AL552_RS22300 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS22315 SM00448 cheY-homologous receiver domain AL552_RS22315 SM00862 Transcriptional regulatory protein, C terminal AL552_RS22320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS22320 SM00387 Histidine kinase-like ATPases AL552_RS22320 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS22330 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS22345 SM00344 helix_turn_helix ASNC type AL552_RS22370 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL552_RS22375 SM00387 Histidine kinase-like ATPases AL552_RS22375 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS22375 SM00448 cheY-homologous receiver domain AL552_RS22400 SM00465 GIY-YIG type nucleases (URI domain) AL552_RS22415 SM00387 Histidine kinase-like ATPases AL552_RS22415 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS22415 SM00448 cheY-homologous receiver domain AL552_RS22420 SM00347 helix_turn_helix multiple antibiotic resistance protein AL552_RS22445 SM00344 helix_turn_helix ASNC type AL552_RS22500 SM00822 AL552_RS22500 AL552_RS22535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL552_RS22550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS22550 SM00387 Histidine kinase-like ATPases AL552_RS22555 SM00421 helix_turn_helix, Lux Regulon AL552_RS22555 SM00448 cheY-homologous receiver domain AL552_RS22590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS22625 SM00091 PAS domain AL552_RS22625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS22630 SM00861 Transketolase, pyrimidine binding domain AL552_RS22655 SM00636 AL552_RS22655 AL552_RS22660 SM00052 Putative diguanylate phosphodiesterase AL552_RS22660 SM00267 diguanylate cyclase AL552_RS22665 SM00450 Rhodanese Homology Domain AL552_RS22690 SM00852 Probable molybdopterin binding domain AL552_RS22730 SM00448 cheY-homologous receiver domain AL552_RS22745 SM01240 AL552_RS22745 AL552_RS22770 SM00028 Tetratricopeptide repeats AL552_RS22770 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS22795 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS22845 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS22900 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS22900 SM00866 AL552_RS22900 AL552_RS22920 SM00893 Electron transfer flavoprotein domain AL552_RS22925 SM00893 Electron transfer flavoprotein domain AL552_RS22940 SM00382 ATPases associated with a variety of cellular activities AL552_RS22965 SM00382 ATPases associated with a variety of cellular activities AL552_RS23050 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL552_RS23055 SM01266 AL552_RS23055 AL552_RS23070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_RS23070 SM00091 PAS domain AL552_RS23070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS23070 SM00387 Histidine kinase-like ATPases AL552_RS23070 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS23070 SM00448 cheY-homologous receiver domain AL552_RS23080 SM00878 Biotin carboxylase C-terminal domain AL552_RS23100 SM00422 helix_turn_helix, mercury resistance AL552_RS23135 SM00822 AL552_RS23135 AL552_RS23170 SM00382 ATPases associated with a variety of cellular activities AL552_RS23185 SM00244 prohibitin homologues AL552_RS23195 SM00052 Putative diguanylate phosphodiesterase AL552_RS23195 SM00091 PAS domain AL552_RS23195 SM00267 diguanylate cyclase AL552_RS23280 SM00382 ATPases associated with a variety of cellular activities AL552_RS23300 SM00354 helix_turn _helix lactose operon repressor AL552_RS23340 SM00382 ATPases associated with a variety of cellular activities AL552_RS23345 SM00422 helix_turn_helix, mercury resistance AL552_RS23350 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS23395 SM00851 MGS-like domain AL552_RS23420 SM00862 Transcriptional regulatory protein, C terminal AL552_RS23460 SM00327 von Willebrand factor (vWF) type A domain AL552_RS23465 SM00327 von Willebrand factor (vWF) type A domain AL552_RS23485 SM00046 Diacylglycerol kinase catalytic domain (presumed) AL552_RS23500 SM00990 AL552_RS23500 AL552_RS23545 SM00387 Histidine kinase-like ATPases AL552_RS23545 SM00448 cheY-homologous receiver domain AL552_RS23560 SM00052 Putative diguanylate phosphodiesterase AL552_RS23560 SM00448 cheY-homologous receiver domain AL552_RS23565 SM00267 diguanylate cyclase AL552_RS23575 SM00421 helix_turn_helix, Lux Regulon AL552_RS23575 SM00448 cheY-homologous receiver domain AL552_RS23580 SM00260 Two component signalling adaptor domain AL552_RS23580 SM00448 cheY-homologous receiver domain AL552_RS23655 SM00704 CDGSH-type zinc finger. Function unknown. AL552_RS23670 SM00953 AL552_RS23670 AL552_RS23715 SM00924 MgtE intracellular N domain AL552_RS23750 SM00422 helix_turn_helix, mercury resistance AL552_RS23780 SM00382 ATPases associated with a variety of cellular activities AL552_RS23785 SM00479 AL552_RS23785 AL552_RS23840 SM00530 Helix-turn-helix XRE-family like proteins AL552_RS23890 SM00354 helix_turn _helix lactose operon repressor AL552_RS23905 SM00052 Putative diguanylate phosphodiesterase AL552_RS23915 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS23915 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL552_RS23925 SM00382 ATPases associated with a variety of cellular activities AL552_RS23945 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS23945 SM00387 Histidine kinase-like ATPases AL552_RS23945 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS23950 SM00448 cheY-homologous receiver domain AL552_RS23970 SM00495 Chitin-binding domain type 3 AL552_RS23970 SM00636 AL552_RS23970 AL552_RS24010 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS24025 SM00487 DEAD-like helicases superfamily AL552_RS24025 SM00490 helicase superfamily c-terminal domain AL552_RS24030 SM00052 Putative diguanylate phosphodiesterase AL552_RS24050 SM00867 YceI-like domain AL552_RS24055 SM00116 Domain in cystathionine beta-synthase and other proteins. AL552_RS24095 SM00782 PhnA Zinc-Ribbon AL552_RS24160 SM00271 DnaJ molecular chaperone homology domain AL552_RS24170 SM00052 Putative diguanylate phosphodiesterase AL552_RS24170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL552_RS24170 SM00267 diguanylate cyclase AL552_RS24185 SM00382 ATPases associated with a variety of cellular activities AL552_RS24200 SM00797 Allophanate hydrolase subunit 2 AL552_RS24205 SM00796 Allophanate hydrolase subunit 1 AL552_RS24215 SM00091 PAS domain AL552_RS24215 SM00267 diguanylate cyclase AL552_RS24215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS24240 SM00881 CoA binding domain AL552_RS24370 SM00448 cheY-homologous receiver domain AL552_RS24370 SM00862 Transcriptional regulatory protein, C terminal AL552_RS24375 SM00387 Histidine kinase-like ATPases AL552_RS24375 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS24385 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL552_RS24385 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL552_RS24400 SM00267 diguanylate cyclase AL552_RS24410 SM00267 diguanylate cyclase AL552_RS24410 SM00448 cheY-homologous receiver domain AL552_RS24420 SM00382 ATPases associated with a variety of cellular activities AL552_RS24460 SM00342 helix_turn_helix, arabinose operon control protein AL552_RS24505 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL552_RS24515 SM00450 Rhodanese Homology Domain AL552_RS24560 SM00421 helix_turn_helix, Lux Regulon AL552_RS24560 SM00448 cheY-homologous receiver domain AL552_RS24565 SM00387 Histidine kinase-like ATPases AL552_RS24685 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AL552_RS24685 SM00267 diguanylate cyclase AL552_RS24725 SM00880 AL552_RS24725 AL552_RS24740 SM00642 Alpha-amylase domain AL552_RS24755 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AL552_RS24755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL552_RS24760 SM01005 Alanine racemase, C-terminal domain AL552_RS24780 SM01119 AL552_RS24780 AL552_RS24820 SM00382 ATPases associated with a variety of cellular activities AL552_RS24890 SM00382 ATPases associated with a variety of cellular activities AL552_RS24890 SM01086 C-terminal, D2-small domain, of ClpB protein AL552_RS24935 SM00331 Sigma factor PP2C-like phosphatases AL552_RS24935 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AL552_RS24965 SM00240 Forkhead associated domain AL552_RS24975 SM00220 Serine/Threonine protein kinases, catalytic domain AL552_RS24995 SM00331 Sigma factor PP2C-like phosphatases AL552_RS24995 SM00448 cheY-homologous receiver domain AL552_RS25030 SM00382 ATPases associated with a variety of cellular activities AL552_RS25050 SM01012 AL552_RS25050 AL552_RS25110 SM00871 Bacterial transcription activator, effector binding domain AL552_RS25115 SM00388 His Kinase A (phosphoacceptor) domain AL552_RS25120 SM00448 cheY-homologous receiver domain AL552_RS25120 SM00862 Transcriptional regulatory protein, C terminal AL552_RS25180 SM00861 Transketolase, pyrimidine binding domain AL552_RS25200 SM00112 Cadherin repeats. AL552_RS25200 SM00327 von Willebrand factor (vWF) type A domain AL552_RS25245 SM00062 Bacterial periplasmic substrate-binding proteins AL552_RS25245 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL552_RS25250 SM00382 ATPases associated with a variety of cellular activities