locus-tag class description IXK98_RS00120 PF03701 Uncharacterised protein family (UPF0181) IXK98_RS00135 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS00135 PF00072 Response regulator receiver domain IXK98_RS00145 PF02233 NAD(P) transhydrogenase beta subunit IXK98_RS00150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IXK98_RS00150 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch IXK98_RS00150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IXK98_RS00165 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS00165 PF07694 5TMR of 5TMR-LYT IXK98_RS00170 PF01590 GAF domain IXK98_RS00170 PF00563 EAL domain IXK98_RS00170 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS00170 PF00360 Phytochrome region IXK98_RS00180 PF03459 TOBE domain IXK98_RS00180 PF00005 ABC transporter IXK98_RS00185 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS00195 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IXK98_RS00195 PF07685 CobB/CobQ-like glutamine amidotransferase domain IXK98_RS00200 PF04076 Bacterial OB fold (BOF) protein IXK98_RS00210 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IXK98_RS00210 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS00215 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXK98_RS00215 PF00381 PTS HPr component phosphorylation site IXK98_RS00220 PF00294 pfkB family carbohydrate kinase IXK98_RS00225 PF02378 Phosphotransferase system, EIIC IXK98_RS00225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IXK98_RS00230 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS00235 PF00483 Nucleotidyl transferase IXK98_RS00240 PF06483 Chitinase C IXK98_RS00240 PF00704 Glycosyl hydrolases family 18 IXK98_RS00245 PF12833 Helix-turn-helix domain IXK98_RS00245 PF06719 AraC-type transcriptional regulator N-terminus IXK98_RS00250 PF00465 Iron-containing alcohol dehydrogenase IXK98_RS00265 PF00072 Response regulator receiver domain IXK98_RS00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS00265 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS00265 PF00672 HAMP domain IXK98_RS00265 PF01627 Hpt domain IXK98_RS00270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IXK98_RS00275 PF02142 MGS-like domain IXK98_RS00285 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS00300 PF00294 pfkB family carbohydrate kinase IXK98_RS00305 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS00310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS00310 PF00672 HAMP domain IXK98_RS00310 PF12729 Four helix bundle sensory module for signal transduction IXK98_RS00320 PF00873 AcrB/AcrD/AcrF family IXK98_RS00325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS00330 PF00814 Glycoprotease family IXK98_RS00330 PF00583 Acetyltransferase (GNAT) family IXK98_RS00350 PF00270 DEAD/DEAH box helicase IXK98_RS00350 PF00271 Helicase conserved C-terminal domain IXK98_RS00355 PF04336 Acyl carrier protein phosphodiesterase IXK98_RS00360 PF03222 Tryptophan/tyrosine permease family IXK98_RS00365 PF01641 SelR domain IXK98_RS00365 PF01625 Peptide methionine sulfoxide reductase IXK98_RS00380 PF03880 DbpA RNA binding domain IXK98_RS00380 PF00271 Helicase conserved C-terminal domain IXK98_RS00380 PF00270 DEAD/DEAH box helicase IXK98_RS00385 PF01227 GTP cyclohydrolase I IXK98_RS00390 PF00994 Probable molybdopterin binding domain IXK98_RS00390 PF03453 MoeA N-terminal region (domain I and II) IXK98_RS00390 PF03454 MoeA C-terminal region (domain IV) IXK98_RS00395 PF00899 ThiF family IXK98_RS00405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS00405 PF00672 HAMP domain IXK98_RS00410 PF00581 Rhodanese-like domain IXK98_RS00450 PF00437 Type II/IV secretion system protein IXK98_RS00465 PF13629 Pilus formation protein N terminal region IXK98_RS00465 PF04972 BON domain IXK98_RS00465 PF00263 Bacterial type II and III secretion system protein IXK98_RS00485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS00485 PF03466 LysR substrate binding domain IXK98_RS00500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS00500 PF03466 LysR substrate binding domain IXK98_RS00510 PF00923 Transaldolase/Fructose-6-phosphate aldolase IXK98_RS00515 PF02780 Transketolase, C-terminal domain IXK98_RS00515 PF00456 Transketolase, thiamine diphosphate binding domain IXK98_RS00515 PF02779 Transketolase, pyrimidine binding domain IXK98_RS00520 PF01037 Lrp/AsnC ligand binding domain IXK98_RS00525 PF07670 Nucleoside recognition IXK98_RS00535 PF00672 HAMP domain IXK98_RS00535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS00535 PF17200 Single Cache domain 2 IXK98_RS00545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXK98_RS00545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXK98_RS00550 PF13654 AAA domain IXK98_RS00550 PF05362 Lon protease (S16) C-terminal proteolytic domain IXK98_RS00560 PF00005 ABC transporter IXK98_RS00560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS00570 PF03466 LysR substrate binding domain IXK98_RS00575 PF02652 L-lactate permease IXK98_RS00580 PF01070 FMN-dependent dehydrogenase IXK98_RS00585 PF02567 Phenazine biosynthesis-like protein IXK98_RS00595 PF01451 Low molecular weight phosphotyrosine protein phosphatase IXK98_RS00620 PF03808 Glycosyl transferase WecB/TagA/CpsF family IXK98_RS00635 PF00535 Glycosyl transferase family 2 IXK98_RS00645 PF13614 AAA domain IXK98_RS00645 PF02706 Chain length determinant protein IXK98_RS00645 PF13807 G-rich domain on putative tyrosine kinase IXK98_RS00660 PF02397 Bacterial sugar transferase IXK98_RS00680 PF00158 Sigma-54 interaction domain IXK98_RS00680 PF01590 GAF domain IXK98_RS00680 PF02954 Bacterial regulatory protein, Fis family IXK98_RS00685 PF00171 Aldehyde dehydrogenase family IXK98_RS00720 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS00720 PF00072 Response regulator receiver domain IXK98_RS00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS00725 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS00725 PF02702 Osmosensitive K+ channel His kinase sensor domain IXK98_RS00725 PF13493 Domain of unknown function (DUF4118) IXK98_RS00730 PF00367 phosphotransferase system, EIIB IXK98_RS00730 PF02378 Phosphotransferase system, EIIC IXK98_RS00735 PF00571 CBS domain IXK98_RS00735 PF00005 ABC transporter IXK98_RS00740 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS00745 PF04069 Substrate binding domain of ABC-type glycine betaine transport system IXK98_RS00750 PF05199 GMC oxidoreductase IXK98_RS00750 PF00732 GMC oxidoreductase IXK98_RS00755 PF00171 Aldehyde dehydrogenase family IXK98_RS00760 PF13977 BetI-type transcriptional repressor, C-terminal IXK98_RS00760 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS00765 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS00765 PF01627 Hpt domain IXK98_RS00765 PF00072 Response regulator receiver domain IXK98_RS00765 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXK98_RS00765 PF00672 HAMP domain IXK98_RS00765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS00770 PF00072 Response regulator receiver domain IXK98_RS00780 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) IXK98_RS00790 PF07715 TonB-dependent Receptor Plug Domain IXK98_RS00790 PF00593 TonB dependent receptor IXK98_RS00795 PF00550 Phosphopantetheine attachment site IXK98_RS00795 PF00668 Condensation domain IXK98_RS00795 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS00795 PF00501 AMP-binding enzyme IXK98_RS00805 PF03621 MbtH-like protein IXK98_RS00810 PF00005 ABC transporter IXK98_RS00815 PF01032 FecCD transport family IXK98_RS00820 PF01497 Periplasmic binding protein IXK98_RS00825 PF00005 ABC transporter IXK98_RS00865 PF00005 ABC transporter IXK98_RS00870 PF00950 ABC 3 transport family IXK98_RS00880 PF07715 TonB-dependent Receptor Plug Domain IXK98_RS00880 PF00593 TonB dependent receptor IXK98_RS00890 PF14492 Elongation Factor G, domain II IXK98_RS00890 PF03144 Elongation factor Tu domain 2 IXK98_RS00890 PF00679 Elongation factor G C-terminus IXK98_RS00890 PF00009 Elongation factor Tu GTP binding domain IXK98_RS00890 PF03764 Elongation factor G, domain IV IXK98_RS00910 PF00478 IMP dehydrogenase / GMP reductase domain IXK98_RS00920 PF00478 IMP dehydrogenase / GMP reductase domain IXK98_RS00925 PF00672 HAMP domain IXK98_RS00925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS00930 PF13609 Gram-negative porin IXK98_RS00935 PF01037 Lrp/AsnC ligand binding domain IXK98_RS00940 PF01810 LysE type translocator IXK98_RS00945 PF04954 Siderophore-interacting protein IXK98_RS00945 PF08021 Siderophore-interacting FAD-binding domain IXK98_RS00950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS00950 PF03466 LysR substrate binding domain IXK98_RS00960 PF00849 RNA pseudouridylate synthase IXK98_RS00985 PF00271 Helicase conserved C-terminal domain IXK98_RS00985 PF00270 DEAD/DEAH box helicase IXK98_RS00990 PF04266 ASCH domain IXK98_RS00995 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS01000 PF16925 Tetracyclin repressor-like, C-terminal domain IXK98_RS01000 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS01005 PF00107 Zinc-binding dehydrogenase IXK98_RS01005 PF16884 N-terminal domain of oxidoreductase IXK98_RS01015 PF00141 Peroxidase IXK98_RS01020 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IXK98_RS01020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXK98_RS01035 PF00128 Alpha amylase, catalytic domain IXK98_RS01040 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS01045 PF02798 Glutathione S-transferase, N-terminal domain IXK98_RS01055 PF10415 Fumarase C C-terminus IXK98_RS01055 PF00206 Lyase IXK98_RS01075 PF00563 EAL domain IXK98_RS01075 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS01075 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS01085 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS01085 PF00072 Response regulator receiver domain IXK98_RS01105 PF13977 BetI-type transcriptional repressor, C-terminal IXK98_RS01105 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS01115 PF00873 AcrB/AcrD/AcrF family IXK98_RS01120 PF00873 AcrB/AcrD/AcrF family IXK98_RS01140 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 IXK98_RS01145 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS01145 PF13188 PAS domain IXK98_RS01145 PF00563 EAL domain IXK98_RS01145 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS01165 PF03116 NQR2, RnfD, RnfE family IXK98_RS01170 PF01654 Cytochrome bd terminal oxidase subunit I IXK98_RS01175 PF02322 Cytochrome bd terminal oxidase subunit II IXK98_RS01220 PF07963 Prokaryotic N-terminal methylation motif IXK98_RS01220 PF00114 Pilin (bacterial filament) IXK98_RS01225 PF01297 Zinc-uptake complex component A periplasmic IXK98_RS01240 PF13599 Pentapeptide repeats (9 copies) IXK98_RS01245 PF01625 Peptide methionine sulfoxide reductase IXK98_RS01245 PF01641 SelR domain IXK98_RS01255 PF02469 Fasciclin domain IXK98_RS01265 PF09278 MerR, DNA binding IXK98_RS01265 PF00376 MerR family regulatory protein IXK98_RS01290 PF02743 Cache domain IXK98_RS01290 PF00672 HAMP domain IXK98_RS01290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS01295 PF00012 Hsp70 protein IXK98_RS01300 PF03466 LysR substrate binding domain IXK98_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS01310 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain IXK98_RS01310 PF13378 Enolase C-terminal domain-like IXK98_RS01325 PF02903 Alpha amylase, N-terminal ig-like domain IXK98_RS01325 PF00128 Alpha amylase, catalytic domain IXK98_RS01325 PF16657 Maltogenic Amylase, C-terminal domain IXK98_RS01330 PF00128 Alpha amylase, catalytic domain IXK98_RS01330 PF02903 Alpha amylase, N-terminal ig-like domain IXK98_RS01335 PF01547 Bacterial extracellular solute-binding protein IXK98_RS01340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS01340 PF03466 LysR substrate binding domain IXK98_RS01345 PF16657 Maltogenic Amylase, C-terminal domain IXK98_RS01345 PF00128 Alpha amylase, catalytic domain IXK98_RS01355 PF00072 Response regulator receiver domain IXK98_RS01355 PF04397 LytTr DNA-binding domain IXK98_RS01360 PF07694 5TMR of 5TMR-LYT IXK98_RS01360 PF13492 GAF domain IXK98_RS01360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS01360 PF06580 Histidine kinase IXK98_RS01375 PF02687 FtsX-like permease family IXK98_RS01375 PF12704 MacB-like periplasmic core domain IXK98_RS01380 PF00005 ABC transporter IXK98_RS01395 PF01042 Endoribonuclease L-PSP IXK98_RS01400 PF07549 SecD/SecF GG Motif IXK98_RS01400 PF02355 Protein export membrane protein IXK98_RS01405 PF02355 Protein export membrane protein IXK98_RS01405 PF07549 SecD/SecF GG Motif IXK98_RS01405 PF13721 SecD export protein N-terminal TM region IXK98_RS01435 PF00563 EAL domain IXK98_RS01435 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS01435 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS01445 PF01329 Pterin 4 alpha carbinolamine dehydratase IXK98_RS01450 PF00351 Biopterin-dependent aromatic amino acid hydroxylase IXK98_RS01455 PF00501 AMP-binding enzyme IXK98_RS01455 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS01460 PF08241 Methyltransferase domain IXK98_RS01465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS01465 PF03466 LysR substrate binding domain IXK98_RS01475 PF02567 Phenazine biosynthesis-like protein IXK98_RS01490 PF00293 NUDIX domain IXK98_RS01490 PF09297 NADH pyrophosphatase zinc ribbon domain IXK98_RS01495 PF13649 Methyltransferase domain IXK98_RS01515 PF00453 Ribosomal protein L20 IXK98_RS01520 PF01632 Ribosomal protein L35 IXK98_RS01525 PF00707 Translation initiation factor IF-3, C-terminal domain IXK98_RS01525 PF05198 Translation initiation factor IF-3, N-terminal domain IXK98_RS01530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IXK98_RS01530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IXK98_RS01530 PF03129 Anticodon binding domain IXK98_RS01530 PF02824 TGS domain IXK98_RS01535 PF03853 YjeF-related protein N-terminus IXK98_RS01535 PF01256 Carbohydrate kinase IXK98_RS01545 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS01545 PF00072 Response regulator receiver domain IXK98_RS01550 PF00072 Response regulator receiver domain IXK98_RS01555 PF00072 Response regulator receiver domain IXK98_RS01555 PF01627 Hpt domain IXK98_RS01555 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS01555 PF00672 HAMP domain IXK98_RS01555 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXK98_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS01565 PF13581 Histidine kinase-like ATPase domain IXK98_RS01575 PF08678 Rsbr N terminal IXK98_RS01575 PF01740 STAS domain IXK98_RS01580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS01580 PF08447 PAS fold IXK98_RS01620 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS01620 PF00155 Aminotransferase class I and II IXK98_RS01630 PF01923 Cobalamin adenosyltransferase IXK98_RS01635 PF01243 Pyridoxamine 5'-phosphate oxidase IXK98_RS01640 PF06228 Haem utilisation ChuX/HutX IXK98_RS01645 PF06969 HemN C-terminal domain IXK98_RS01645 PF04055 Radical SAM superfamily IXK98_RS01650 PF03544 Gram-negative bacterial TonB protein C-terminal IXK98_RS01655 PF01618 MotA/TolQ/ExbB proton channel family IXK98_RS01660 PF02472 Biopolymer transport protein ExbD/TolR IXK98_RS01670 PF01032 FecCD transport family IXK98_RS01675 PF00005 ABC transporter IXK98_RS01685 PF03618 Kinase/pyrophosphorylase IXK98_RS01690 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain IXK98_RS01690 PF02896 PEP-utilising enzyme, TIM barrel domain IXK98_RS01690 PF00391 PEP-utilising enzyme, mobile domain IXK98_RS01695 PF03922 OmpW family IXK98_RS01700 PF01551 Peptidase family M23 IXK98_RS01700 PF08525 Opacity-associated protein A N-terminal motif IXK98_RS01700 PF01476 LysM domain IXK98_RS01725 PF07670 Nucleoside recognition IXK98_RS01735 PF13185 GAF domain IXK98_RS01735 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS01740 PF03783 Curli production assembly/transport component CsgG IXK98_RS01770 PF00005 ABC transporter IXK98_RS01775 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS01780 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS01785 PF12849 PBP superfamily domain IXK98_RS01790 PF00672 HAMP domain IXK98_RS01790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS01790 PF02743 Cache domain IXK98_RS01795 PF18029 Glyoxalase-like domain IXK98_RS01795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXK98_RS01805 PF01584 CheW-like domain IXK98_RS01805 PF00072 Response regulator receiver domain IXK98_RS01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS01815 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS01815 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS01820 PF11849 Domain of unknown function (DUF3369) IXK98_RS01825 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS01830 PF00294 pfkB family carbohydrate kinase IXK98_RS01835 PF13407 Periplasmic binding protein domain IXK98_RS01840 PF02653 Branched-chain amino acid transport system / permease component IXK98_RS01845 PF00005 ABC transporter IXK98_RS01850 PF05025 RbsD / FucU transport protein family IXK98_RS01860 PF00909 Ammonium Transporter Family IXK98_RS01865 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS01880 PF08669 Glycine cleavage T-protein C-terminal barrel domain IXK98_RS01880 PF01571 Aminomethyltransferase folate-binding domain IXK98_RS01890 PF00464 Serine hydroxymethyltransferase IXK98_RS01895 PF01597 Glycine cleavage H-protein IXK98_RS01900 PF02347 Glycine cleavage system P-protein IXK98_RS01910 PF01809 Putative membrane protein insertion efficiency factor IXK98_RS01930 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS01930 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS01950 PF01810 LysE type translocator IXK98_RS01955 PF01381 Helix-turn-helix IXK98_RS01955 PF07883 Cupin domain IXK98_RS01965 PF01810 LysE type translocator IXK98_RS01970 PF00892 EamA-like transporter family IXK98_RS01975 PF05638 Type VI secretion system effector, Hcp IXK98_RS01980 PF04717 Type VI secretion system, phage-baseplate injector IXK98_RS02000 PF04717 Type VI secretion system, phage-baseplate injector IXK98_RS02000 PF01471 Putative peptidoglycan binding domain IXK98_RS02025 PF01575 MaoC like domain IXK98_RS02040 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS02040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IXK98_RS02045 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXK98_RS02045 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IXK98_RS02050 PF01202 Shikimate kinase IXK98_RS02055 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IXK98_RS02060 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IXK98_RS02075 PF00563 EAL domain IXK98_RS02075 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS02075 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS02090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS02090 PF03466 LysR substrate binding domain IXK98_RS02095 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS02095 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS02095 PF00563 EAL domain IXK98_RS02105 PF04055 Radical SAM superfamily IXK98_RS02105 PF02310 B12 binding domain IXK98_RS02115 PF06865 Pyrimidine/purine nucleoside phosphorylase IXK98_RS02125 PF00924 Mechanosensitive ion channel IXK98_RS02130 PF07690 Major Facilitator Superfamily IXK98_RS02145 PF00128 Alpha amylase, catalytic domain IXK98_RS02200 PF00072 Response regulator receiver domain IXK98_RS02200 PF02954 Bacterial regulatory protein, Fis family IXK98_RS02200 PF00158 Sigma-54 interaction domain IXK98_RS02205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS02205 PF13426 PAS domain IXK98_RS02205 PF00072 Response regulator receiver domain IXK98_RS02210 PF00072 Response regulator receiver domain IXK98_RS02210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS02210 PF08448 PAS fold IXK98_RS02210 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS02210 PF13188 PAS domain IXK98_RS02220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXK98_RS02235 PF13673 Acetyltransferase (GNAT) domain IXK98_RS02235 PF00583 Acetyltransferase (GNAT) family IXK98_RS02240 PF13411 MerR HTH family regulatory protein IXK98_RS02255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS02260 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS02280 PF00892 EamA-like transporter family IXK98_RS02315 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS02315 PF17158 Membrane-associated sensor, integral membrane domain IXK98_RS02320 PF12848 ABC transporter IXK98_RS02320 PF00005 ABC transporter IXK98_RS02320 PF16326 ABC transporter C-terminal domain IXK98_RS02325 PF12837 4Fe-4S binding domain IXK98_RS02325 PF12801 4Fe-4S binding domain IXK98_RS02330 PF12838 4Fe-4S dicluster domain IXK98_RS02330 PF12800 4Fe-4S binding domain IXK98_RS02335 PF01568 Molydopterin dinucleotide binding domain IXK98_RS02335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region IXK98_RS02335 PF12838 4Fe-4S dicluster domain IXK98_RS02335 PF00384 Molybdopterin oxidoreductase IXK98_RS02335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IXK98_RS02375 PF04463 Protein of unknown function (DUF523) IXK98_RS02385 PF01928 CYTH domain IXK98_RS02400 PF02803 Thiolase, C-terminal domain IXK98_RS02400 PF00108 Thiolase, N-terminal domain IXK98_RS02410 PF01144 Coenzyme A transferase IXK98_RS02415 PF03466 LysR substrate binding domain IXK98_RS02415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS02420 PF00072 Response regulator receiver domain IXK98_RS02420 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS02425 PF17200 Single Cache domain 2 IXK98_RS02425 PF07730 Histidine kinase IXK98_RS02430 PF03480 Bacterial extracellular solute-binding protein, family 7 IXK98_RS02440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IXK98_RS02455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXK98_RS02465 PF03466 LysR substrate binding domain IXK98_RS02465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS02470 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IXK98_RS02480 PF13188 PAS domain IXK98_RS02480 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS02480 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS02480 PF00563 EAL domain IXK98_RS02485 PF00563 EAL domain IXK98_RS02485 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS02485 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS02490 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS02495 PF07690 Major Facilitator Superfamily IXK98_RS02505 PF00701 Dihydrodipicolinate synthetase family IXK98_RS02510 PF02423 Ornithine cyclodeaminase/mu-crystallin family IXK98_RS02515 PF05690 Thiazole biosynthesis protein ThiG IXK98_RS02515 PF01266 FAD dependent oxidoreductase IXK98_RS02520 PF05544 Proline racemase IXK98_RS02525 PF00171 Aldehyde dehydrogenase family IXK98_RS02530 PF00144 Beta-lactamase IXK98_RS02535 PF00367 phosphotransferase system, EIIB IXK98_RS02535 PF02378 Phosphotransferase system, EIIC IXK98_RS02540 PF00072 Response regulator receiver domain IXK98_RS02540 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS02545 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS02545 PF08521 Two-component sensor kinase N-terminal IXK98_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS02550 PF01547 Bacterial extracellular solute-binding protein IXK98_RS02555 PF01156 Inosine-uridine preferring nucleoside hydrolase IXK98_RS02560 PF08448 PAS fold IXK98_RS02560 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS02560 PF00563 EAL domain IXK98_RS02575 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS02585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS02590 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS02595 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS02595 PF12911 N-terminal TM domain of oligopeptide transport permease C IXK98_RS02600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS02600 PF00005 ABC transporter IXK98_RS02605 PF00005 ABC transporter IXK98_RS02605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS02615 PF09905 DNA-binding protein VF530 IXK98_RS02620 PF00557 Metallopeptidase family M24 IXK98_RS02630 PF00579 tRNA synthetases class I (W and Y) IXK98_RS02645 PF03786 D-mannonate dehydratase (UxuA) IXK98_RS02650 PF07729 FCD domain IXK98_RS02650 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS02655 PF03480 Bacterial extracellular solute-binding protein, family 7 IXK98_RS02660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IXK98_RS02665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IXK98_RS02670 PF01232 Mannitol dehydrogenase Rossmann domain IXK98_RS02670 PF08125 Mannitol dehydrogenase C-terminal domain IXK98_RS02675 PF02614 Glucuronate isomerase IXK98_RS02680 PF00294 pfkB family carbohydrate kinase IXK98_RS02685 PF01081 KDPG and KHG aldolase IXK98_RS02690 PF10688 Bacterial inner membrane protein IXK98_RS02695 PF00933 Glycosyl hydrolase family 3 N terminal domain IXK98_RS02730 PF01752 Collagenase IXK98_RS02730 PF04151 Bacterial pre-peptidase C-terminal domain IXK98_RS02730 PF08453 Peptidase family M9 N-terminal IXK98_RS02740 PF03372 Endonuclease/Exonuclease/phosphatase family IXK98_RS02745 PF08453 Peptidase family M9 N-terminal IXK98_RS02745 PF01752 Collagenase IXK98_RS02755 PF00106 short chain dehydrogenase IXK98_RS02775 PF00892 EamA-like transporter family IXK98_RS02780 PF03466 LysR substrate binding domain IXK98_RS02780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS02785 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 IXK98_RS02790 PF01810 LysE type translocator IXK98_RS02795 PF13091 PLD-like domain IXK98_RS02800 PF00375 Sodium:dicarboxylate symporter family IXK98_RS02805 PF00563 EAL domain IXK98_RS02805 PF05231 MASE1 IXK98_RS02815 PF04820 Tryptophan halogenase IXK98_RS02840 PF00550 Phosphopantetheine attachment site IXK98_RS02845 PF00550 Phosphopantetheine attachment site IXK98_RS02855 PF00501 AMP-binding enzyme IXK98_RS02855 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS02870 PF00221 Aromatic amino acid lyase IXK98_RS02895 PF00109 Beta-ketoacyl synthase, N-terminal domain IXK98_RS02895 PF02801 Beta-ketoacyl synthase, C-terminal domain IXK98_RS02900 PF07977 FabA-like domain IXK98_RS02910 PF00109 Beta-ketoacyl synthase, N-terminal domain IXK98_RS02910 PF02801 Beta-ketoacyl synthase, C-terminal domain IXK98_RS02915 PF14600 Cellulose-binding domain IXK98_RS02915 PF00150 Cellulase (glycosyl hydrolase family 5) IXK98_RS02925 PF00313 'Cold-shock' DNA-binding domain IXK98_RS02930 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) IXK98_RS02935 PF17944 Arginine decarboxylase C-terminal helical extension IXK98_RS02935 PF17810 Arginine decarboxylase helical bundle domain IXK98_RS02935 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IXK98_RS02940 PF00491 Arginase family IXK98_RS02945 PF12833 Helix-turn-helix domain IXK98_RS02945 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IXK98_RS02955 PF04116 Fatty acid hydroxylase superfamily IXK98_RS02965 PF04151 Bacterial pre-peptidase C-terminal domain IXK98_RS02965 PF01447 Thermolysin metallopeptidase, catalytic domain IXK98_RS02965 PF03413 Peptidase propeptide and YPEB domain IXK98_RS02965 PF02868 Thermolysin metallopeptidase, alpha-helical domain IXK98_RS02965 PF07504 Fungalysin/Thermolysin Propeptide Motif IXK98_RS02970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS02970 PF00672 HAMP domain IXK98_RS02975 PF07729 FCD domain IXK98_RS02975 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS02980 PF00941 FAD binding domain in molybdopterin dehydrogenase IXK98_RS02980 PF03450 CO dehydrogenase flavoprotein C-terminal domain IXK98_RS02985 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase IXK98_RS02985 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain IXK98_RS02995 PF01979 Amidohydrolase family IXK98_RS03000 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS03005 PF00672 HAMP domain IXK98_RS03005 PF02743 Cache domain IXK98_RS03005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS03010 PF00072 Response regulator receiver domain IXK98_RS03010 PF00672 HAMP domain IXK98_RS03010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS03010 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS03010 PF01627 Hpt domain IXK98_RS03010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXK98_RS03025 PF02492 CobW/HypB/UreG, nucleotide-binding domain IXK98_RS03030 PF01730 UreF IXK98_RS03040 PF05194 UreE urease accessory protein, C-terminal domain IXK98_RS03040 PF02814 UreE urease accessory protein, N-terminal domain IXK98_RS03045 PF01979 Amidohydrolase family IXK98_RS03045 PF00449 Urease alpha-subunit, N-terminal domain IXK98_RS03050 PF00699 Urease beta subunit IXK98_RS03055 PF00547 Urease, gamma subunit IXK98_RS03060 PF01774 UreD urease accessory protein IXK98_RS03065 PF00005 ABC transporter IXK98_RS03070 PF00005 ABC transporter IXK98_RS03070 PF12399 Branched-chain amino acid ATP-binding cassette transporter IXK98_RS03080 PF02653 Branched-chain amino acid transport system / permease component IXK98_RS03090 PF05922 Peptidase inhibitor I9 IXK98_RS03090 PF00082 Subtilase family IXK98_RS03090 PF04151 Bacterial pre-peptidase C-terminal domain IXK98_RS03100 PF02743 Cache domain IXK98_RS03100 PF00672 HAMP domain IXK98_RS03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS03110 PF04115 Ureidoglycolate lyase IXK98_RS03115 PF03561 Allantoicase repeat IXK98_RS03120 PF09349 OHCU decarboxylase IXK98_RS03120 PF01014 Uricase IXK98_RS03130 PF00576 HIUase/Transthyretin family IXK98_RS03135 PF00860 Permease family IXK98_RS03140 PF00860 Permease family IXK98_RS03145 PF01979 Amidohydrolase family IXK98_RS03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS03155 PF03466 LysR substrate binding domain IXK98_RS03165 PF00561 alpha/beta hydrolase fold IXK98_RS03190 PF03611 PTS system sugar-specific permease component IXK98_RS03200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXK98_RS03205 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS03210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS03210 PF03466 LysR substrate binding domain IXK98_RS03215 PF01810 LysE type translocator IXK98_RS03230 PF02028 BCCT, betaine/carnitine/choline family transporter IXK98_RS03240 PF00171 Aldehyde dehydrogenase family IXK98_RS03255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IXK98_RS03260 PF01238 Phosphomannose isomerase type I IXK98_RS03265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXK98_RS03265 PF02378 Phosphotransferase system, EIIC IXK98_RS03265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IXK98_RS03270 PF00128 Alpha amylase, catalytic domain IXK98_RS03275 PF01074 Glycosyl hydrolases family 38 N-terminal domain IXK98_RS03275 PF07748 Glycosyl hydrolases family 38 C-terminal domain IXK98_RS03275 PF09261 Alpha mannosidase middle domain IXK98_RS03280 PF02378 Phosphotransferase system, EIIC IXK98_RS03280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXK98_RS03280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IXK98_RS03285 PF01380 SIS domain IXK98_RS03285 PF01418 Helix-turn-helix domain, rpiR family IXK98_RS03290 PF00892 EamA-like transporter family IXK98_RS03300 PF00581 Rhodanese-like domain IXK98_RS03305 PF04794 YdjC-like protein IXK98_RS03315 PF12848 ABC transporter IXK98_RS03315 PF00005 ABC transporter IXK98_RS03325 PF00753 Metallo-beta-lactamase superfamily IXK98_RS03335 PF13443 Cro/C1-type HTH DNA-binding domain IXK98_RS03355 PF00037 4Fe-4S binding domain IXK98_RS03355 PF11953 Domain of unknown function (DUF3470) IXK98_RS03365 PF01638 HxlR-like helix-turn-helix IXK98_RS03375 PF13673 Acetyltransferase (GNAT) domain IXK98_RS03380 PF08032 RNA 2'-O ribose methyltransferase substrate binding IXK98_RS03380 PF00588 SpoU rRNA Methylase family IXK98_RS03395 PF01966 HD domain IXK98_RS03405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS03405 PF03466 LysR substrate binding domain IXK98_RS03410 PF07690 Major Facilitator Superfamily IXK98_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS03440 PF00005 ABC transporter IXK98_RS03470 PF02954 Bacterial regulatory protein, Fis family IXK98_RS03470 PF00072 Response regulator receiver domain IXK98_RS03470 PF00158 Sigma-54 interaction domain IXK98_RS03475 PF02743 Cache domain IXK98_RS03475 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS03475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS03490 PF01327 Polypeptide deformylase IXK98_RS03500 PF00561 alpha/beta hydrolase fold IXK98_RS03505 PF03466 LysR substrate binding domain IXK98_RS03505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS03510 PF02386 Cation transport protein IXK98_RS03515 PF02080 TrkA-C domain IXK98_RS03515 PF02254 TrkA-N domain IXK98_RS03520 PF00072 Response regulator receiver domain IXK98_RS03520 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS03525 PF07689 KaiB domain IXK98_RS03525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS03525 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS03530 PF00672 HAMP domain IXK98_RS03530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS03545 PF10282 Lactonase, 7-bladed beta-propeller IXK98_RS03550 PF00728 Glycosyl hydrolase family 20, catalytic domain IXK98_RS03550 PF02838 Glycosyl hydrolase family 20, domain 2 IXK98_RS03555 PF01081 KDPG and KHG aldolase IXK98_RS03560 PF00294 pfkB family carbohydrate kinase IXK98_RS03565 PF00474 Sodium:solute symporter family IXK98_RS03575 PF07969 Amidohydrolase family IXK98_RS03585 PF01380 SIS domain IXK98_RS03585 PF01418 Helix-turn-helix domain, rpiR family IXK98_RS03585 PF02685 Glucokinase IXK98_RS03595 PF00005 ABC transporter IXK98_RS03600 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS03600 PF07702 UTRA domain IXK98_RS03610 PF01116 Fructose-bisphosphate aldolase class-II IXK98_RS03615 PF01979 Amidohydrolase family IXK98_RS03620 PF03610 PTS system fructose IIA component IXK98_RS03625 PF03613 PTS system mannose/fructose/sorbose family IID component IXK98_RS03630 PF03609 PTS system sorbose-specific iic component IXK98_RS03635 PF03830 PTS system sorbose subfamily IIB component IXK98_RS03640 PF01380 SIS domain IXK98_RS03645 PF08013 Tagatose 6 phosphate kinase IXK98_RS03650 PF08220 DeoR-like helix-turn-helix domain IXK98_RS03650 PF00455 DeoR C terminal sensor domain IXK98_RS03655 PF08220 DeoR-like helix-turn-helix domain IXK98_RS03655 PF00455 DeoR C terminal sensor domain IXK98_RS03670 PF00005 ABC transporter IXK98_RS03675 PF12704 MacB-like periplasmic core domain IXK98_RS03675 PF02687 FtsX-like permease family IXK98_RS03700 PF02311 AraC-like ligand binding domain IXK98_RS03700 PF12833 Helix-turn-helix domain IXK98_RS03705 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS03705 PF18113 Rubredoxin binding C-terminal domain IXK98_RS03710 PF00301 Rubredoxin IXK98_RS03710 PF00258 Flavodoxin IXK98_RS03710 PF00753 Metallo-beta-lactamase superfamily IXK98_RS03720 PF13289 SIR2-like domain IXK98_RS03730 PF00696 Amino acid kinase family IXK98_RS03730 PF13840 ACT domain IXK98_RS03735 PF06339 Ectoine synthase IXK98_RS03740 PF00202 Aminotransferase class-III IXK98_RS03745 PF00583 Acetyltransferase (GNAT) family IXK98_RS03755 PF12833 Helix-turn-helix domain IXK98_RS03755 PF02311 AraC-like ligand binding domain IXK98_RS03760 PF01810 LysE type translocator IXK98_RS03765 PF13404 AsnC-type helix-turn-helix domain IXK98_RS03765 PF01037 Lrp/AsnC ligand binding domain IXK98_RS03775 PF03475 3-alpha domain IXK98_RS03775 PF03473 MOSC domain IXK98_RS03780 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS03785 PF03553 Na+/H+ antiporter family IXK98_RS03790 PF00155 Aminotransferase class I and II IXK98_RS03795 PF00082 Subtilase family IXK98_RS03820 PF13458 Periplasmic binding protein IXK98_RS03825 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS03825 PF17158 Membrane-associated sensor, integral membrane domain IXK98_RS03830 PF01553 Acyltransferase IXK98_RS03870 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS03885 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS03890 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS03895 PF03466 LysR substrate binding domain IXK98_RS03895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS03900 PF00893 Small Multidrug Resistance protein IXK98_RS03910 PF07690 Major Facilitator Superfamily IXK98_RS03915 PF06224 Winged helix DNA-binding domain IXK98_RS03920 PF08240 Alcohol dehydrogenase GroES-like domain IXK98_RS03920 PF02801 Beta-ketoacyl synthase, C-terminal domain IXK98_RS03920 PF08659 KR domain IXK98_RS03920 PF00550 Phosphopantetheine attachment site IXK98_RS03920 PF14765 Polyketide synthase dehydratase IXK98_RS03920 PF00698 Acyl transferase domain IXK98_RS03920 PF16197 Ketoacyl-synthetase C-terminal extension IXK98_RS03920 PF00109 Beta-ketoacyl synthase, N-terminal domain IXK98_RS03930 PF02219 Methylenetetrahydrofolate reductase IXK98_RS03930 PF02574 Homocysteine S-methyltransferase IXK98_RS03935 PF00929 Exonuclease IXK98_RS03935 PF11490 DNA polymerase III polC-type N-terminus II IXK98_RS03935 PF07733 Bacterial DNA polymerase III alpha NTPase domain IXK98_RS03935 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IXK98_RS03935 PF14579 Helix-hairpin-helix motif IXK98_RS03935 PF02811 PHP domain IXK98_RS03950 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS03950 PF00072 Response regulator receiver domain IXK98_RS03960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS03960 PF02743 Cache domain IXK98_RS03960 PF00672 HAMP domain IXK98_RS03965 PF00072 Response regulator receiver domain IXK98_RS03965 PF01339 CheB methylesterase IXK98_RS03970 PF03975 CheD chemotactic sensory transduction IXK98_RS03975 PF03705 CheR methyltransferase, all-alpha domain IXK98_RS03975 PF01739 CheR methyltransferase, SAM binding domain IXK98_RS03980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS03980 PF02203 Tar ligand binding domain homologue IXK98_RS03980 PF00672 HAMP domain IXK98_RS03985 PF01584 CheW-like domain IXK98_RS03990 PF01584 CheW-like domain IXK98_RS03995 PF01584 CheW-like domain IXK98_RS03995 PF09078 CheY binding IXK98_RS03995 PF02895 Signal transducing histidine kinase, homodimeric domain IXK98_RS03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS03995 PF01627 Hpt domain IXK98_RS04000 PF00072 Response regulator receiver domain IXK98_RS04010 PF05127 Helicase IXK98_RS04010 PF13718 GNAT acetyltransferase 2 IXK98_RS04015 PF02195 ParB-like nuclease domain IXK98_RS04015 PF08775 ParB family IXK98_RS04020 PF13614 AAA domain IXK98_RS04020 PF18607 ParA helix turn helix domain IXK98_RS04040 PF00005 ABC transporter IXK98_RS04040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS04045 PF00005 ABC transporter IXK98_RS04045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS04060 PF01709 Transcriptional regulator IXK98_RS04090 PF01638 HxlR-like helix-turn-helix IXK98_RS04105 PF08803 Putative mono-oxygenase ydhR IXK98_RS04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS04110 PF03466 LysR substrate binding domain IXK98_RS04115 PF14602 Hexapeptide repeat of succinyl-transferase IXK98_RS04115 PF12464 Maltose acetyltransferase IXK98_RS04130 PF02001 Protein of unknown function DUF134 IXK98_RS04145 PF03466 LysR substrate binding domain IXK98_RS04145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS04165 PF00892 EamA-like transporter family IXK98_RS04195 PF00027 Cyclic nucleotide-binding domain IXK98_RS04195 PF13545 Crp-like helix-turn-helix domain IXK98_RS04200 PF02586 SOS response associated peptidase (SRAP) IXK98_RS04210 PF01047 MarR family IXK98_RS04220 PF01274 Malate synthase IXK98_RS04225 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IXK98_RS04225 PF00205 Thiamine pyrophosphate enzyme, central domain IXK98_RS04225 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IXK98_RS04230 PF01261 Xylose isomerase-like TIM barrel IXK98_RS04235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXK98_RS04235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IXK98_RS04240 PF05651 Putative sugar diacid recognition IXK98_RS04240 PF17853 GGDEF-like domain IXK98_RS04240 PF13556 PucR C-terminal helix-turn-helix domain IXK98_RS04245 PF02447 GntP family permease IXK98_RS04250 PF02595 Glycerate kinase family IXK98_RS04255 PF04013 Putative SAM-dependent RNA methyltransferase IXK98_RS04290 PF07969 Amidohydrolase family IXK98_RS04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS04295 PF03466 LysR substrate binding domain IXK98_RS04305 PF00881 Nitroreductase family IXK98_RS04310 PF00582 Universal stress protein family IXK98_RS04315 PF00232 Glycosyl hydrolase family 1 IXK98_RS04345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IXK98_RS04345 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IXK98_RS04350 PF03480 Bacterial extracellular solute-binding protein, family 7 IXK98_RS04365 PF03717 Penicillin-binding Protein dimerisation domain IXK98_RS04365 PF00905 Penicillin binding protein transpeptidase domain IXK98_RS04385 PF03466 LysR substrate binding domain IXK98_RS04385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS04395 PF08543 Phosphomethylpyrimidine kinase IXK98_RS04400 PF00005 ABC transporter IXK98_RS04405 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS04410 PF09084 NMT1/THI5 like IXK98_RS04415 PF03070 TENA/THI-4/PQQC family IXK98_RS04420 PF13185 GAF domain IXK98_RS04420 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS04425 PF01569 PAP2 superfamily IXK98_RS04450 PF03466 LysR substrate binding domain IXK98_RS04450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS04480 PF01476 LysM domain IXK98_RS04480 PF08525 Opacity-associated protein A N-terminal motif IXK98_RS04480 PF01551 Peptidase family M23 IXK98_RS04485 PF03466 LysR substrate binding domain IXK98_RS04485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS04490 PF00107 Zinc-binding dehydrogenase IXK98_RS04490 PF08240 Alcohol dehydrogenase GroES-like domain IXK98_RS04495 PF00117 Glutamine amidotransferase class-I IXK98_RS04495 PF02540 NAD synthase IXK98_RS04495 PF00958 GMP synthase C terminal domain IXK98_RS04510 PF04542 Sigma-70 region 2 IXK98_RS04510 PF08281 Sigma-70, region 4 IXK98_RS04550 PF04972 BON domain IXK98_RS04550 PF13629 Pilus formation protein N terminal region IXK98_RS04550 PF00263 Bacterial type II and III secretion system protein IXK98_RS04560 PF10609 NUBPL iron-transfer P-loop NTPase IXK98_RS04565 PF00437 Type II/IV secretion system protein IXK98_RS04585 PF00691 OmpA family IXK98_RS04590 PF01124 MAPEG family IXK98_RS04610 PF12697 Alpha/beta hydrolase family IXK98_RS04620 PF00106 short chain dehydrogenase IXK98_RS04625 PF00939 Sodium:sulfate symporter transmembrane region IXK98_RS04630 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IXK98_RS04635 PF07683 Cobalamin synthesis protein cobW C-terminal domain IXK98_RS04635 PF02492 CobW/HypB/UreG, nucleotide-binding domain IXK98_RS04640 PF01979 Amidohydrolase family IXK98_RS04650 PF02627 Carboxymuconolactone decarboxylase family IXK98_RS04660 PF03466 LysR substrate binding domain IXK98_RS04660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS04670 PF07690 Major Facilitator Superfamily IXK98_RS04675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IXK98_RS04680 PF00171 Aldehyde dehydrogenase family IXK98_RS04685 PF17200 Single Cache domain 2 IXK98_RS04685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS04685 PF00672 HAMP domain IXK98_RS04700 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS04705 PF10928 Protein of unknown function (DUF2810) IXK98_RS04710 PF00455 DeoR C terminal sensor domain IXK98_RS04710 PF08220 DeoR-like helix-turn-helix domain IXK98_RS04725 PF00465 Iron-containing alcohol dehydrogenase IXK98_RS04730 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS04735 PF00923 Transaldolase/Fructose-6-phosphate aldolase IXK98_RS04740 PF00456 Transketolase, thiamine diphosphate binding domain IXK98_RS04740 PF02779 Transketolase, pyrimidine binding domain IXK98_RS04740 PF02780 Transketolase, C-terminal domain IXK98_RS04745 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IXK98_RS04750 PF01546 Peptidase family M20/M25/M40 IXK98_RS04755 PF02378 Phosphotransferase system, EIIC IXK98_RS04755 PF00367 phosphotransferase system, EIIB IXK98_RS04755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IXK98_RS04765 PF03222 Tryptophan/tyrosine permease family IXK98_RS04770 PF17874 MalT-like TPR region IXK98_RS04770 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS04775 PF00343 Carbohydrate phosphorylase IXK98_RS04780 PF02446 4-alpha-glucanotransferase IXK98_RS04785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXK98_RS04785 PF02806 Alpha amylase, C-terminal all-beta domain IXK98_RS04785 PF00128 Alpha amylase, catalytic domain IXK98_RS04800 PF00472 RF-1 domain IXK98_RS04815 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS04850 PF00561 alpha/beta hydrolase fold IXK98_RS04855 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS04865 PF02678 Pirin IXK98_RS04865 PF05726 Pirin C-terminal cupin domain IXK98_RS04885 PF00664 ABC transporter transmembrane region IXK98_RS04885 PF00005 ABC transporter IXK98_RS04900 PF00962 Adenosine/AMP deaminase IXK98_RS04905 PF07715 TonB-dependent Receptor Plug Domain IXK98_RS04905 PF00593 TonB dependent receptor IXK98_RS04915 PF01032 FecCD transport family IXK98_RS04920 PF01497 Periplasmic binding protein IXK98_RS04925 PF00005 ABC transporter IXK98_RS04930 PF07690 Major Facilitator Superfamily IXK98_RS04945 PF03616 Sodium/glutamate symporter IXK98_RS04950 PF07238 PilZ domain IXK98_RS04950 PF12945 Flagellar protein YcgR IXK98_RS04965 PF00583 Acetyltransferase (GNAT) family IXK98_RS04975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXK98_RS04980 PF03466 LysR substrate binding domain IXK98_RS04980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS04985 PF00764 Arginosuccinate synthase IXK98_RS05015 PF01047 MarR family IXK98_RS05025 PF00083 Sugar (and other) transporter IXK98_RS05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS05035 PF08521 Two-component sensor kinase N-terminal IXK98_RS05035 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS05040 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS05040 PF00072 Response regulator receiver domain IXK98_RS05045 PF04116 Fatty acid hydroxylase superfamily IXK98_RS05065 PF00873 AcrB/AcrD/AcrF family IXK98_RS05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS05080 PF03466 LysR substrate binding domain IXK98_RS05085 PF07670 Nucleoside recognition IXK98_RS05110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS05110 PF12793 Sugar transport-related sRNA regulator N-term IXK98_RS05115 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS05115 PF00155 Aminotransferase class I and II IXK98_RS05125 PF00970 Oxidoreductase FAD-binding domain IXK98_RS05125 PF00111 2Fe-2S iron-sulfur cluster binding domain IXK98_RS05125 PF00175 Oxidoreductase NAD-binding domain IXK98_RS05130 PF03063 Prismane/CO dehydrogenase family IXK98_RS05140 PF01569 PAP2 superfamily IXK98_RS05150 PF13936 Helix-turn-helix domain IXK98_RS05150 PF04198 Putative sugar-binding domain IXK98_RS05155 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IXK98_RS05160 PF02502 Ribose/Galactose Isomerase IXK98_RS05165 PF03480 Bacterial extracellular solute-binding protein, family 7 IXK98_RS05175 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IXK98_RS05175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IXK98_RS05180 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IXK98_RS05185 PF02733 Dak1 domain IXK98_RS05190 PF02734 DAK2 domain IXK98_RS05195 PF00121 Triosephosphate isomerase IXK98_RS05200 PF03547 Membrane transport protein IXK98_RS05210 PF00925 GTP cyclohydrolase II IXK98_RS05210 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IXK98_RS05215 PF00158 Sigma-54 interaction domain IXK98_RS05215 PF01590 GAF domain IXK98_RS05220 PF12833 Helix-turn-helix domain IXK98_RS05220 PF02311 AraC-like ligand binding domain IXK98_RS05235 PF07690 Major Facilitator Superfamily IXK98_RS05245 PF03992 Antibiotic biosynthesis monooxygenase IXK98_RS05260 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS05265 PF00155 Aminotransferase class I and II IXK98_RS05270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS05270 PF03466 LysR substrate binding domain IXK98_RS05285 PF07690 Major Facilitator Superfamily IXK98_RS05290 PF01979 Amidohydrolase family IXK98_RS05295 PF00480 ROK family IXK98_RS05300 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase IXK98_RS05305 PF03480 Bacterial extracellular solute-binding protein, family 7 IXK98_RS05310 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IXK98_RS05315 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IXK98_RS05320 PF00701 Dihydrodipicolinate synthetase family IXK98_RS05325 PF01380 SIS domain IXK98_RS05325 PF01418 Helix-turn-helix domain, rpiR family IXK98_RS05330 PF01344 Kelch motif IXK98_RS05335 PF07646 Kelch motif IXK98_RS05340 PF13088 BNR repeat-like domain IXK98_RS05340 PF09264 Vibrio cholerae sialidase, lectin insertion IXK98_RS05345 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS05350 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXK98_RS05350 PF00128 Alpha amylase, catalytic domain IXK98_RS05355 PF02264 LamB porin IXK98_RS05360 PF07148 Maltose operon periplasmic protein precursor (MalM) IXK98_RS05370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS05370 PF03466 LysR substrate binding domain IXK98_RS05375 PF02525 Flavodoxin-like fold IXK98_RS05390 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain IXK98_RS05390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IXK98_RS05400 PF03600 Citrate transporter IXK98_RS05405 PF07670 Nucleoside recognition IXK98_RS05410 PF07670 Nucleoside recognition IXK98_RS05415 PF07687 Peptidase dimerisation domain IXK98_RS05415 PF01546 Peptidase family M20/M25/M40 IXK98_RS05420 PF03466 LysR substrate binding domain IXK98_RS05420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS05435 PF07715 TonB-dependent Receptor Plug Domain IXK98_RS05435 PF00593 TonB dependent receptor IXK98_RS05445 PF01557 Fumarylacetoacetate (FAA) hydrolase family IXK98_RS05465 PF01810 LysE type translocator IXK98_RS05470 PF00583 Acetyltransferase (GNAT) family IXK98_RS05480 PF02683 Cytochrome C biogenesis protein transmembrane region IXK98_RS05480 PF11412 Disulphide bond corrector protein DsbC IXK98_RS05485 PF00578 AhpC/TSA family IXK98_RS05495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXK98_RS05495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXK98_RS05495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXK98_RS05495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXK98_RS05500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IXK98_RS05500 PF02790 Cytochrome C oxidase subunit II, transmembrane domain IXK98_RS05505 PF00115 Cytochrome C and Quinol oxidase polypeptide I IXK98_RS05510 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 IXK98_RS05515 PF00510 Cytochrome c oxidase subunit III IXK98_RS05535 PF02628 Cytochrome oxidase assembly protein IXK98_RS05540 PF01040 UbiA prenyltransferase family IXK98_RS05555 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS05560 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS05565 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS05570 PF00005 ABC transporter IXK98_RS05575 PF00793 DAHP synthetase I family IXK98_RS05585 PF00571 CBS domain IXK98_RS05585 PF00005 ABC transporter IXK98_RS05590 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS05600 PF12793 Sugar transport-related sRNA regulator N-term IXK98_RS05600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS05625 PF13629 Pilus formation protein N terminal region IXK98_RS05625 PF00263 Bacterial type II and III secretion system protein IXK98_RS05625 PF04972 BON domain IXK98_RS05635 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IXK98_RS05640 PF00437 Type II/IV secretion system protein IXK98_RS05690 PF02424 ApbE family IXK98_RS05695 PF02683 Cytochrome C biogenesis protein transmembrane region IXK98_RS05695 PF11412 Disulphide bond corrector protein DsbC IXK98_RS05700 PF00171 Aldehyde dehydrogenase family IXK98_RS05705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS05705 PF03466 LysR substrate binding domain IXK98_RS05710 PF00106 short chain dehydrogenase IXK98_RS05725 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IXK98_RS05735 PF00375 Sodium:dicarboxylate symporter family IXK98_RS05740 PF03193 RsgA GTPase IXK98_RS05750 PF02630 SCO1/SenC IXK98_RS05760 PF13302 Acetyltransferase (GNAT) domain IXK98_RS05765 PF01966 HD domain IXK98_RS05770 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IXK98_RS05775 PF01212 Beta-eliminating lyase IXK98_RS05780 PF08329 Chitinase A, N-terminal domain IXK98_RS05780 PF00704 Glycosyl hydrolases family 18 IXK98_RS05785 PF00664 ABC transporter transmembrane region IXK98_RS05785 PF00005 ABC transporter IXK98_RS05785 PF03412 Peptidase C39 family IXK98_RS05800 PF00529 HlyD membrane-fusion protein of T1SS IXK98_RS05805 PF01243 Pyridoxamine 5'-phosphate oxidase IXK98_RS05805 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region IXK98_RS05815 PF03781 Sulfatase-modifying factor enzyme 1 IXK98_RS05825 PF12833 Helix-turn-helix domain IXK98_RS05830 PF14850 DNA-binding domain of Proline dehydrogenase IXK98_RS05830 PF01619 Proline dehydrogenase IXK98_RS05830 PF18327 Proline utilization A proline dehydrogenase N-terminal domain IXK98_RS05830 PF00171 Aldehyde dehydrogenase family IXK98_RS05840 PF00474 Sodium:solute symporter family IXK98_RS05850 PF01037 Lrp/AsnC ligand binding domain IXK98_RS05870 PF00672 HAMP domain IXK98_RS05870 PF12729 Four helix bundle sensory module for signal transduction IXK98_RS05870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS05875 PF00583 Acetyltransferase (GNAT) family IXK98_RS05890 PF06942 GlpM protein IXK98_RS05905 PF07155 ECF-type riboflavin transporter, S component IXK98_RS05910 PF00529 HlyD membrane-fusion protein of T1SS IXK98_RS05910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS05915 PF11742 Protein of unknown function (DUF3302) IXK98_RS05920 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS05935 PF01048 Phosphorylase superfamily IXK98_RS05940 PF08349 Protein of unknown function (DUF1722) IXK98_RS05945 PF13411 MerR HTH family regulatory protein IXK98_RS05950 PF03441 FAD binding domain of DNA photolyase IXK98_RS05950 PF00875 DNA photolyase IXK98_RS05955 PF17969 L,D-transpeptidase C-terminal domain IXK98_RS05955 PF01476 LysM domain IXK98_RS05955 PF03734 L,D-transpeptidase catalytic domain IXK98_RS05965 PF00271 Helicase conserved C-terminal domain IXK98_RS05965 PF00270 DEAD/DEAH box helicase IXK98_RS05975 PF03880 DbpA RNA binding domain IXK98_RS05975 PF00270 DEAD/DEAH box helicase IXK98_RS05975 PF00271 Helicase conserved C-terminal domain IXK98_RS05980 PF00575 S1 RNA binding domain IXK98_RS05980 PF08206 Ribonuclease B OB domain IXK98_RS05980 PF00773 RNB domain IXK98_RS05995 PF12849 PBP superfamily domain IXK98_RS06005 PF16200 C-terminal region of band_7 IXK98_RS06005 PF01145 SPFH domain / Band 7 family IXK98_RS06020 PF02056 Family 4 glycosyl hydrolase IXK98_RS06020 PF11975 Family 4 glycosyl hydrolase C-terminal domain IXK98_RS06025 PF12833 Helix-turn-helix domain IXK98_RS06030 PF00005 ABC transporter IXK98_RS06030 PF08402 TOBE domain IXK98_RS06035 PF01547 Bacterial extracellular solute-binding protein IXK98_RS06040 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS06040 PF14785 Maltose transport system permease protein MalF P2 domain IXK98_RS06045 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS06070 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IXK98_RS06070 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IXK98_RS06085 PF01627 Hpt domain IXK98_RS06085 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS06085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS06085 PF00672 HAMP domain IXK98_RS06085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXK98_RS06085 PF00072 Response regulator receiver domain IXK98_RS06090 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IXK98_RS06095 PF07969 Amidohydrolase family IXK98_RS06100 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin IXK98_RS06105 PF00571 CBS domain IXK98_RS06105 PF01769 Divalent cation transporter IXK98_RS06105 PF03448 MgtE intracellular N domain IXK98_RS06110 PF13533 Biotin-lipoyl like IXK98_RS06130 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS06130 PF00155 Aminotransferase class I and II IXK98_RS06135 PF13230 Glutamine amidotransferases class-II IXK98_RS06145 PF13520 Amino acid permease IXK98_RS06150 PF13404 AsnC-type helix-turn-helix domain IXK98_RS06150 PF01037 Lrp/AsnC ligand binding domain IXK98_RS06155 PF03466 LysR substrate binding domain IXK98_RS06155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS06165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXK98_RS06170 PF02566 OsmC-like protein IXK98_RS06175 PF00892 EamA-like transporter family IXK98_RS06200 PF13519 von Willebrand factor type A domain IXK98_RS06205 PF07584 Aerotolerance regulator N-terminal IXK98_RS06205 PF00092 von Willebrand factor type A domain IXK98_RS06215 PF01882 Protein of unknown function DUF58 IXK98_RS06220 PF17863 AAA lid domain IXK98_RS06220 PF07726 ATPase family associated with various cellular activities (AAA) IXK98_RS06225 PF02743 Cache domain IXK98_RS06225 PF00672 HAMP domain IXK98_RS06225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS06240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS06240 PF03466 LysR substrate binding domain IXK98_RS06260 PF01717 Cobalamin-independent synthase, Catalytic domain IXK98_RS06260 PF08267 Cobalamin-independent synthase, N-terminal domain IXK98_RS06265 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS06270 PF01979 Amidohydrolase family IXK98_RS06275 PF01679 Proteolipid membrane potential modulator IXK98_RS06280 PF00111 2Fe-2S iron-sulfur cluster binding domain IXK98_RS06280 PF03476 MOSC N-terminal beta barrel domain IXK98_RS06280 PF03473 MOSC domain IXK98_RS06280 PF00111 2Fe-2S iron-sulfur cluster binding domain IXK98_RS06280 PF03476 MOSC N-terminal beta barrel domain IXK98_RS06280 PF03473 MOSC domain IXK98_RS06285 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS06285 PF08448 PAS fold IXK98_RS06300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS06305 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS06315 PF00005 ABC transporter IXK98_RS06315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS06330 PF00128 Alpha amylase, catalytic domain IXK98_RS06335 PF02743 Cache domain IXK98_RS06335 PF00672 HAMP domain IXK98_RS06335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS06350 PF02540 NAD synthase IXK98_RS06355 PF01467 Cytidylyltransferase-like IXK98_RS06365 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS06365 PF13188 PAS domain IXK98_RS06365 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS06365 PF00563 EAL domain IXK98_RS06370 PF03466 LysR substrate binding domain IXK98_RS06370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS06375 PF07690 Major Facilitator Superfamily IXK98_RS06390 PF00462 Glutaredoxin IXK98_RS06395 PF00892 EamA-like transporter family IXK98_RS06405 PF01554 MatE IXK98_RS06410 PF00999 Sodium/hydrogen exchanger family IXK98_RS06410 PF02254 TrkA-N domain IXK98_RS06415 PF02525 Flavodoxin-like fold IXK98_RS06430 PF01590 GAF domain IXK98_RS06430 PF00158 Sigma-54 interaction domain IXK98_RS06435 PF00042 Globin IXK98_RS06435 PF00175 Oxidoreductase NAD-binding domain IXK98_RS06435 PF00970 Oxidoreductase FAD-binding domain IXK98_RS06450 PF00313 'Cold-shock' DNA-binding domain IXK98_RS06455 PF03889 Alternative ribosome-rescue factor A IXK98_RS06470 PF00768 D-alanyl-D-alanine carboxypeptidase IXK98_RS06470 PF07943 Penicillin-binding protein 5, C-terminal domain IXK98_RS06475 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading IXK98_RS06475 PF18416 N-acetylglucosamine binding protein domain 2 IXK98_RS06490 PF12843 Putative quorum-sensing-regulated virulence factor IXK98_RS06505 PF08281 Sigma-70, region 4 IXK98_RS06505 PF04542 Sigma-70 region 2 IXK98_RS06510 PF03795 YCII-related domain IXK98_RS06515 PF00465 Iron-containing alcohol dehydrogenase IXK98_RS06525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS06525 PF03466 LysR substrate binding domain IXK98_RS06530 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS06555 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS06560 PF00202 Aminotransferase class-III IXK98_RS06565 PF00266 Aminotransferase class-V IXK98_RS06580 PF00005 ABC transporter IXK98_RS06585 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS06590 PF07702 UTRA domain IXK98_RS06590 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS06610 PF00246 Zinc carboxypeptidase IXK98_RS06610 PF18027 Cytosolic carboxypeptidase N-terminal domain IXK98_RS06615 PF01266 FAD dependent oxidoreductase IXK98_RS06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS06620 PF03466 LysR substrate binding domain IXK98_RS06625 PF03313 Serine dehydratase alpha chain IXK98_RS06625 PF03315 Serine dehydratase beta chain IXK98_RS06645 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS06650 PF00072 Response regulator receiver domain IXK98_RS06650 PF01584 CheW-like domain IXK98_RS06665 PF00149 Calcineurin-like phosphoesterase IXK98_RS06665 PF02872 5'-nucleotidase, C-terminal domain IXK98_RS06670 PF00034 Cytochrome c IXK98_RS06675 PF01212 Beta-eliminating lyase IXK98_RS06680 PF00293 NUDIX domain IXK98_RS06685 PF12592 Protein of unknown function (DUF3763) IXK98_RS06685 PF07728 AAA domain (dynein-related subfamily) IXK98_RS06685 PF17868 AAA lid domain IXK98_RS06690 PF05762 VWA domain containing CoxE-like protein IXK98_RS06695 PF07690 Major Facilitator Superfamily IXK98_RS06710 PF01037 Lrp/AsnC ligand binding domain IXK98_RS06715 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS06715 PF17156 Gammaproteobacterial periplasmic sensor domain IXK98_RS06720 PF01047 MarR family IXK98_RS06725 PF02028 BCCT, betaine/carnitine/choline family transporter IXK98_RS06730 PF00929 Exonuclease IXK98_RS06740 PF01268 Formate--tetrahydrofolate ligase IXK98_RS06760 PF00672 HAMP domain IXK98_RS06760 PF00909 Ammonium Transporter Family IXK98_RS06765 PF01497 Periplasmic binding protein IXK98_RS06770 PF00593 TonB dependent receptor IXK98_RS06770 PF07715 TonB-dependent Receptor Plug Domain IXK98_RS06775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS06775 PF16750 Sensor domain of 2-component histidine kinase IXK98_RS06775 PF00672 HAMP domain IXK98_RS06775 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS06780 PF00072 Response regulator receiver domain IXK98_RS06780 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS06785 PF08774 VRR-NUC domain IXK98_RS06785 PF18081 Fanconi anemia-associated nuclease SAP domain IXK98_RS06800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS06800 PF00672 HAMP domain IXK98_RS06800 PF17200 Single Cache domain 2 IXK98_RS06810 PF01012 Electron transfer flavoprotein domain IXK98_RS06815 PF01012 Electron transfer flavoprotein domain IXK98_RS06815 PF00766 Electron transfer flavoprotein FAD-binding domain IXK98_RS06820 PF12729 Four helix bundle sensory module for signal transduction IXK98_RS06820 PF00672 HAMP domain IXK98_RS06820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS06825 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IXK98_RS06825 PF00364 Biotin-requiring enzyme IXK98_RS06825 PF02817 e3 binding domain IXK98_RS06830 PF02779 Transketolase, pyrimidine binding domain IXK98_RS06830 PF02780 Transketolase, C-terminal domain IXK98_RS06835 PF00676 Dehydrogenase E1 component IXK98_RS06840 PF01235 Sodium:alanine symporter family IXK98_RS06855 PF00672 HAMP domain IXK98_RS06855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS06855 PF17200 Single Cache domain 2 IXK98_RS06860 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS06860 PF08448 PAS fold IXK98_RS06880 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS06880 PF05230 MASE2 domain IXK98_RS06885 PF00072 Response regulator receiver domain IXK98_RS06890 PF00682 HMGL-like IXK98_RS06895 PF00378 Enoyl-CoA hydratase/isomerase IXK98_RS06900 PF01039 Carboxyl transferase domain IXK98_RS06905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXK98_RS06905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXK98_RS06905 PF02770 Acyl-CoA dehydrogenase, middle domain IXK98_RS06910 PF00376 MerR family regulatory protein IXK98_RS06910 PF09278 MerR, DNA binding IXK98_RS06915 PF00108 Thiolase, N-terminal domain IXK98_RS06915 PF02803 Thiolase, C-terminal domain IXK98_RS06920 PF00171 Aldehyde dehydrogenase family IXK98_RS06925 PF02770 Acyl-CoA dehydrogenase, middle domain IXK98_RS06925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXK98_RS06925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXK98_RS06930 PF00378 Enoyl-CoA hydratase/isomerase IXK98_RS06935 PF00378 Enoyl-CoA hydratase/isomerase IXK98_RS06940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXK98_RS06940 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IXK98_RS06950 PF00672 HAMP domain IXK98_RS06950 PF12729 Four helix bundle sensory module for signal transduction IXK98_RS06950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS06960 PF04237 YjbR IXK98_RS06970 PF03466 LysR substrate binding domain IXK98_RS06970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS06975 PF09330 D-lactate dehydrogenase, membrane binding IXK98_RS06975 PF01565 FAD binding domain IXK98_RS06990 PF00563 EAL domain IXK98_RS06990 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS06990 PF08448 PAS fold IXK98_RS07005 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IXK98_RS07005 PF00384 Molybdopterin oxidoreductase IXK98_RS07005 PF01568 Molydopterin dinucleotide binding domain IXK98_RS07010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXK98_RS07010 PF10414 Sirohaem synthase dimerisation region IXK98_RS07015 PF02885 Glycosyl transferase family, helical bundle domain IXK98_RS07015 PF00591 Glycosyl transferase family, a/b domain IXK98_RS07020 PF00072 Response regulator receiver domain IXK98_RS07020 PF03861 ANTAR domain IXK98_RS07025 PF00005 ABC transporter IXK98_RS07030 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS07035 PF00005 ABC transporter IXK98_RS07040 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IXK98_RS07040 PF04324 BFD-like [2Fe-2S] binding domain IXK98_RS07040 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS07040 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IXK98_RS07040 PF13806 Rieske-like [2Fe-2S] domain IXK98_RS07040 PF18267 Rubredoxin NAD+ reductase C-terminal domain IXK98_RS07045 PF13806 Rieske-like [2Fe-2S] domain IXK98_RS07050 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS07050 PF00072 Response regulator receiver domain IXK98_RS07060 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS07060 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS07060 PF00563 EAL domain IXK98_RS07090 PF11756 Nitrous oxide-stimulated promoter IXK98_RS07095 PF07690 Major Facilitator Superfamily IXK98_RS07100 PF00085 Thioredoxin IXK98_RS07105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IXK98_RS07105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IXK98_RS07110 PF00149 Calcineurin-like phosphoesterase IXK98_RS07110 PF12320 Type 5 capsule protein repressor C-terminal domain IXK98_RS07115 PF13476 AAA domain IXK98_RS07120 PF00072 Response regulator receiver domain IXK98_RS07120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS07125 PF00155 Aminotransferase class I and II IXK98_RS07135 PF00654 Voltage gated chloride channel IXK98_RS07140 PF07683 Cobalamin synthesis protein cobW C-terminal domain IXK98_RS07140 PF02492 CobW/HypB/UreG, nucleotide-binding domain IXK98_RS07145 PF01926 50S ribosome-binding GTPase IXK98_RS07155 PF06082 Exopolysaccharide biosynthesis protein YbjH IXK98_RS07165 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF IXK98_RS07175 PF10531 SLBB domain IXK98_RS07175 PF02563 Polysaccharide biosynthesis/export protein IXK98_RS07185 PF00571 CBS domain IXK98_RS07185 PF01380 SIS domain IXK98_RS07190 PF01061 ABC-2 type transporter IXK98_RS07195 PF00005 ABC transporter IXK98_RS07215 PF05159 Capsule polysaccharide biosynthesis protein IXK98_RS07225 PF02348 Cytidylyltransferase IXK98_RS07230 PF00793 DAHP synthetase I family IXK98_RS07235 PF00953 Glycosyl transferase family 4 IXK98_RS07250 PF00202 Aminotransferase class-III IXK98_RS07255 PF00171 Aldehyde dehydrogenase family IXK98_RS07255 PF00465 Iron-containing alcohol dehydrogenase IXK98_RS07275 PF00936 BMC domain IXK98_RS07290 PF08447 PAS fold IXK98_RS07290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS07295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS07300 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS07305 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS07305 PF12911 N-terminal TM domain of oligopeptide transport permease C IXK98_RS07310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS07310 PF00005 ABC transporter IXK98_RS07320 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS07320 PF00563 EAL domain IXK98_RS07330 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS07330 PF00072 Response regulator receiver domain IXK98_RS07350 PF01032 FecCD transport family IXK98_RS07355 PF01032 FecCD transport family IXK98_RS07360 PF00005 ABC transporter IXK98_RS07365 PF13411 MerR HTH family regulatory protein IXK98_RS07370 PF13609 Gram-negative porin IXK98_RS07375 PF06445 GyrI-like small molecule binding domain IXK98_RS07375 PF12833 Helix-turn-helix domain IXK98_RS07380 PF07715 TonB-dependent Receptor Plug Domain IXK98_RS07380 PF00593 TonB dependent receptor IXK98_RS07385 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS07385 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS07385 PF00563 EAL domain IXK98_RS07390 PF00871 Acetokinase family IXK98_RS07495 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IXK98_RS07535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXK98_RS07535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXK98_RS07550 PF05656 Protein of unknown function (DUF805) IXK98_RS07570 PF13302 Acetyltransferase (GNAT) domain IXK98_RS07580 PF13344 Haloacid dehalogenase-like hydrolase IXK98_RS07580 PF00293 NUDIX domain IXK98_RS07605 PF00043 Glutathione S-transferase, C-terminal domain IXK98_RS07605 PF02798 Glutathione S-transferase, N-terminal domain IXK98_RS07630 PF09905 DNA-binding protein VF530 IXK98_RS07655 PF08361 MAATS-type transcriptional repressor, C-terminal region IXK98_RS07655 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS07660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS07670 PF00873 AcrB/AcrD/AcrF family IXK98_RS07675 PF00106 short chain dehydrogenase IXK98_RS07680 PF00108 Thiolase, N-terminal domain IXK98_RS07680 PF02803 Thiolase, C-terminal domain IXK98_RS07690 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus IXK98_RS07690 PF00561 alpha/beta hydrolase fold IXK98_RS07695 PF01177 Asp/Glu/Hydantoin racemase IXK98_RS07700 PF07690 Major Facilitator Superfamily IXK98_RS07705 PF00657 GDSL-like Lipase/Acylhydrolase IXK98_RS07710 PF03440 Aerolysin/Pertussis toxin (APT) domain IXK98_RS07710 PF01117 Aerolysin toxin IXK98_RS07715 PF05547 Immune inhibitor A peptidase M6 IXK98_RS07715 PF00801 PKD domain IXK98_RS07760 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS07760 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IXK98_RS07775 PF00873 AcrB/AcrD/AcrF family IXK98_RS07780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS07790 PF03477 ATP cone domain IXK98_RS07790 PF13597 Anaerobic ribonucleoside-triphosphate reductase IXK98_RS07800 PF00155 Aminotransferase class I and II IXK98_RS07805 PF18030 RimK PreATP-grasp domain IXK98_RS07805 PF08443 RimK-like ATP-grasp domain IXK98_RS07810 PF00293 NUDIX domain IXK98_RS07815 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IXK98_RS07815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXK98_RS07825 PF00691 OmpA family IXK98_RS07825 PF05736 OprF membrane domain IXK98_RS07830 PF00072 Response regulator receiver domain IXK98_RS07840 PF04363 Protein of unknown function (DUF496) IXK98_RS07850 PF04337 Protein of unknown function, DUF480 IXK98_RS07855 PF01541 GIY-YIG catalytic domain IXK98_RS07865 PF13407 Periplasmic binding protein domain IXK98_RS07870 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS07870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS07870 PF00072 Response regulator receiver domain IXK98_RS07870 PF09308 LuxQ, periplasmic IXK98_RS07890 PF12805 FUSC-like inner membrane protein yccS IXK98_RS07895 PF13361 UvrD-like helicase C-terminal domain IXK98_RS07895 PF00580 UvrD/REP helicase N-terminal domain IXK98_RS07895 PF12462 DNA helicase IV / RNA helicase N terminal IXK98_RS07915 PF00684 DnaJ central domain IXK98_RS07915 PF00226 DnaJ domain IXK98_RS07915 PF01556 DnaJ C terminal domain IXK98_RS07925 PF00005 ABC transporter IXK98_RS07930 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS07935 PF13302 Acetyltransferase (GNAT) domain IXK98_RS07945 PF00563 EAL domain IXK98_RS07945 PF00498 FHA domain IXK98_RS07945 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS07950 PF12241 Trans-2-enoyl-CoA reductase catalytic region IXK98_RS07950 PF07055 Enoyl reductase FAD binding domain IXK98_RS07950 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IXK98_RS07955 PF13472 GDSL-like Lipase/Acylhydrolase family IXK98_RS07960 PF00005 ABC transporter IXK98_RS07975 PF02626 Carboxyltransferase domain, subdomain A and B IXK98_RS07985 PF03746 LamB/YcsF family IXK98_RS07990 PF00563 EAL domain IXK98_RS07990 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS07990 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS07995 PF16363 GDP-mannose 4,6 dehydratase IXK98_RS08005 PF03264 NapC/NirT cytochrome c family, N-terminal region IXK98_RS08010 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) IXK98_RS08015 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IXK98_RS08015 PF00384 Molybdopterin oxidoreductase IXK98_RS08015 PF01568 Molydopterin dinucleotide binding domain IXK98_RS08025 PF12800 4Fe-4S binding domain IXK98_RS08025 PF00037 4Fe-4S binding domain IXK98_RS08025 PF13187 4Fe-4S dicluster domain IXK98_RS08030 PF00672 HAMP domain IXK98_RS08030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS08030 PF07730 Histidine kinase IXK98_RS08030 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term IXK98_RS08035 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS08035 PF00072 Response regulator receiver domain IXK98_RS08040 PF03606 C4-dicarboxylate anaerobic carrier IXK98_RS08065 PF01292 Prokaryotic cytochrome b561 IXK98_RS08070 PF04264 YceI-like domain IXK98_RS08075 PF01226 Formate/nitrite transporter IXK98_RS08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS08080 PF03466 LysR substrate binding domain IXK98_RS08085 PF06496 Protein of unknown function (DUF1097) IXK98_RS08090 PF11398 Protein of unknown function (DUF2813) IXK98_RS08095 PF02872 5'-nucleotidase, C-terminal domain IXK98_RS08095 PF00149 Calcineurin-like phosphoesterase IXK98_RS08100 PF03741 Integral membrane protein TerC family IXK98_RS08115 PF11852 Domain of unknown function (DUF3372) IXK98_RS08115 PF03714 Bacterial pullanase-associated domain IXK98_RS08115 PF17967 Pullulanase N2 domain IXK98_RS08115 PF18494 Pullulanase Ins domain IXK98_RS08115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IXK98_RS08125 PF02163 Peptidase family M50 IXK98_RS08125 PF17820 PDZ domain IXK98_RS08130 PF01435 Peptidase family M48 IXK98_RS08135 PF03061 Thioesterase superfamily IXK98_RS08145 PF12793 Sugar transport-related sRNA regulator N-term IXK98_RS08145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS08155 PF00593 TonB dependent receptor IXK98_RS08155 PF04886 PT repeat IXK98_RS08155 PF07715 TonB-dependent Receptor Plug Domain IXK98_RS08160 PF03466 LysR substrate binding domain IXK98_RS08160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS08170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXK98_RS08170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IXK98_RS08175 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase IXK98_RS08185 PF01966 HD domain IXK98_RS08210 PF03466 LysR substrate binding domain IXK98_RS08210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS08215 PF00155 Aminotransferase class I and II IXK98_RS08220 PF00107 Zinc-binding dehydrogenase IXK98_RS08220 PF08240 Alcohol dehydrogenase GroES-like domain IXK98_RS08240 PF00194 Eukaryotic-type carbonic anhydrase IXK98_RS08255 PF01773 Na+ dependent nucleoside transporter N-terminus IXK98_RS08255 PF07662 Na+ dependent nucleoside transporter C-terminus IXK98_RS08255 PF07670 Nucleoside recognition IXK98_RS08260 PF07687 Peptidase dimerisation domain IXK98_RS08260 PF01546 Peptidase family M20/M25/M40 IXK98_RS08280 PF00563 EAL domain IXK98_RS08280 PF00498 FHA domain IXK98_RS08280 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS08285 PF01758 Sodium Bile acid symporter family IXK98_RS08295 PF00583 Acetyltransferase (GNAT) family IXK98_RS08295 PF13380 CoA binding domain IXK98_RS08295 PF13607 Succinyl-CoA ligase like flavodoxin domain IXK98_RS08305 PF01820 D-ala D-ala ligase N-terminus IXK98_RS08305 PF07478 D-ala D-ala ligase C-terminus IXK98_RS08320 PF01253 Translation initiation factor SUI1 IXK98_RS08495 PF05707 Zonular occludens toxin (Zot) IXK98_RS08555 PF12724 Flavodoxin domain IXK98_RS08560 PF02386 Cation transport protein IXK98_RS08565 PF09186 Domain of unknown function (DUF1949) IXK98_RS08565 PF01205 Uncharacterized protein family UPF0029 IXK98_RS08570 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IXK98_RS08570 PF00378 Enoyl-CoA hydratase/isomerase IXK98_RS08570 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IXK98_RS08575 PF02803 Thiolase, C-terminal domain IXK98_RS08575 PF00108 Thiolase, N-terminal domain IXK98_RS08580 PF03466 LysR substrate binding domain IXK98_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS08585 PF07690 Major Facilitator Superfamily IXK98_RS08590 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS08595 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS08600 PF12804 MobA-like NTP transferase domain IXK98_RS08600 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS08605 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain IXK98_RS08605 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain IXK98_RS08610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXK98_RS08610 PF02874 ATP synthase alpha/beta family, beta-barrel domain IXK98_RS08615 PF00231 ATP synthase IXK98_RS08620 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXK98_RS08620 PF00306 ATP synthase alpha/beta chain, C terminal domain IXK98_RS08620 PF02874 ATP synthase alpha/beta family, beta-barrel domain IXK98_RS08625 PF00213 ATP synthase delta (OSCP) subunit IXK98_RS08630 PF00430 ATP synthase B/B' CF(0) IXK98_RS08635 PF00137 ATP synthase subunit C IXK98_RS08640 PF00119 ATP synthase A chain IXK98_RS08645 PF03899 ATP synthase I chain IXK98_RS08650 PF17762 HTH domain found in ParB protein IXK98_RS08650 PF02195 ParB-like nuclease domain IXK98_RS08655 PF13614 AAA domain IXK98_RS08660 PF02527 rRNA small subunit methyltransferase G IXK98_RS08665 PF13932 GidA associated domain IXK98_RS08665 PF01134 Glucose inhibited division protein A IXK98_RS08670 PF00258 Flavodoxin IXK98_RS08675 PF12631 MnmE helical domain IXK98_RS08675 PF10396 GTP-binding protein TrmE N-terminus IXK98_RS08675 PF01926 50S ribosome-binding GTPase IXK98_RS08680 PF14849 YidC periplasmic domain IXK98_RS08680 PF02096 60Kd inner membrane protein IXK98_RS08685 PF01809 Putative membrane protein insertion efficiency factor IXK98_RS08690 PF00825 Ribonuclease P IXK98_RS08695 PF00468 Ribosomal protein L34 IXK98_RS08700 PF00005 ABC transporter IXK98_RS08705 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS08710 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS08715 PF08299 Bacterial dnaA protein helix-turn-helix IXK98_RS08715 PF00308 Bacterial dnaA protein IXK98_RS08715 PF11638 DnaA N-terminal domain IXK98_RS08720 PF02767 DNA polymerase III beta subunit, central domain IXK98_RS08720 PF00712 DNA polymerase III beta subunit, N-terminal domain IXK98_RS08720 PF02768 DNA polymerase III beta subunit, C-terminal domain IXK98_RS08725 PF02463 RecF/RecN/SMC N terminal domain IXK98_RS08730 PF18053 DNA gyrase B subunit insert domain IXK98_RS08730 PF01751 Toprim domain IXK98_RS08730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS08730 PF00986 DNA gyrase B subunit, carboxyl terminus IXK98_RS08730 PF00204 DNA gyrase B IXK98_RS08735 PF00011 Hsp20/alpha crystallin family IXK98_RS08745 PF00155 Aminotransferase class I and II IXK98_RS08750 PF05746 DALR anticodon binding domain IXK98_RS08750 PF02092 Glycyl-tRNA synthetase beta subunit IXK98_RS08755 PF02091 Glycyl-tRNA synthetase alpha subunit IXK98_RS08760 PF01169 Uncharacterized protein family UPF0016 IXK98_RS08770 PF01206 Sulfurtransferase TusA IXK98_RS08780 PF03466 LysR substrate binding domain IXK98_RS08780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS08785 PF08240 Alcohol dehydrogenase GroES-like domain IXK98_RS08785 PF00107 Zinc-binding dehydrogenase IXK98_RS08790 PF00291 Pyridoxal-phosphate dependent enzyme IXK98_RS08790 PF00585 C-terminal regulatory domain of Threonine dehydratase IXK98_RS08795 PF00920 Dehydratase family IXK98_RS08800 PF01063 Amino-transferase class IV IXK98_RS08810 PF00205 Thiamine pyrophosphate enzyme, central domain IXK98_RS08810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IXK98_RS08810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IXK98_RS08815 PF01078 Magnesium chelatase, subunit ChlI IXK98_RS08815 PF13335 Magnesium chelatase, subunit ChlI C-terminal IXK98_RS08825 PF01553 Acyltransferase IXK98_RS08830 PF01323 DSBA-like thioredoxin domain IXK98_RS08835 PF01636 Phosphotransferase enzyme family IXK98_RS08840 PF13746 4Fe-4S dicluster domain IXK98_RS08840 PF12801 4Fe-4S binding domain IXK98_RS08840 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase IXK98_RS08845 PF06288 Protein of unknown function (DUF1040) IXK98_RS08850 PF07070 SpoOM protein IXK98_RS08855 PF03006 Haemolysin-III related IXK98_RS08860 PF02386 Cation transport protein IXK98_RS08865 PF02254 TrkA-N domain IXK98_RS08865 PF02080 TrkA-C domain IXK98_RS08870 PF01189 16S rRNA methyltransferase RsmB/F IXK98_RS08870 PF01029 NusB family IXK98_RS08875 PF00551 Formyl transferase IXK98_RS08875 PF02911 Formyl transferase, C-terminal domain IXK98_RS08880 PF01327 Polypeptide deformylase IXK98_RS08885 PF01476 LysM domain IXK98_RS08890 PF17782 DprA winged helix domain IXK98_RS08890 PF02481 DNA recombination-mediator protein A IXK98_RS08895 PF04361 Protein of unknown function (DUF494) IXK98_RS08900 PF01396 Topoisomerase DNA binding C4 zinc finger IXK98_RS08905 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain IXK98_RS08905 PF02222 ATP-grasp domain IXK98_RS08910 PF00731 AIR carboxylase IXK98_RS08915 PF01300 Telomere recombination IXK98_RS08920 PF01218 Coproporphyrinogen III oxidase IXK98_RS08925 PF01488 Shikimate / quinate 5-dehydrogenase IXK98_RS08925 PF08501 Shikimate dehydrogenase substrate binding domain IXK98_RS08925 PF18317 Shikimate 5'-dehydrogenase C-terminal domain IXK98_RS08930 PF07369 Protein of unknown function (DUF1488) IXK98_RS08935 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS08980 PF00563 EAL domain IXK98_RS08980 PF13188 PAS domain IXK98_RS08980 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS08980 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS08985 PF00158 Sigma-54 interaction domain IXK98_RS08985 PF00072 Response regulator receiver domain IXK98_RS08985 PF02954 Bacterial regulatory protein, Fis family IXK98_RS08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS08990 PF00989 PAS fold IXK98_RS08990 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS09000 PF00120 Glutamine synthetase, catalytic domain IXK98_RS09000 PF03951 Glutamine synthetase, beta-Grasp domain IXK98_RS09005 PF03144 Elongation factor Tu domain 2 IXK98_RS09005 PF00009 Elongation factor Tu GTP binding domain IXK98_RS09005 PF00679 Elongation factor G C-terminus IXK98_RS09020 PF03631 Virulence factor BrkB IXK98_RS09025 PF02580 D-Tyr-tRNA(Tyr) deacylase IXK98_RS09030 PF09500 Putative thioesterase (yiiD_Cterm) IXK98_RS09030 PF00583 Acetyltransferase (GNAT) family IXK98_RS09040 PF01293 Phosphoenolpyruvate carboxykinase IXK98_RS09045 PF01430 Hsp33 protein IXK98_RS09055 PF11356 Type II secretion system protein C IXK98_RS09060 PF03958 Bacterial type II/III secretion system short domain IXK98_RS09060 PF00263 Bacterial type II and III secretion system protein IXK98_RS09065 PF00437 Type II/IV secretion system protein IXK98_RS09070 PF00482 Type II secretion system (T2SS), protein F IXK98_RS09075 PF07963 Prokaryotic N-terminal methylation motif IXK98_RS09075 PF08334 Type II secretion system (T2SS), protein G IXK98_RS09080 PF12019 Type II transport protein GspH IXK98_RS09085 PF02501 Type II secretion system (T2SS), protein I IXK98_RS09085 PF07963 Prokaryotic N-terminal methylation motif IXK98_RS09090 PF07963 Prokaryotic N-terminal methylation motif IXK98_RS09090 PF11612 Type II secretion system (T2SS), protein J IXK98_RS09095 PF03934 Type II secretion system (T2SS), protein K IXK98_RS09100 PF05134 Type II secretion system (T2SS), protein L IXK98_RS09100 PF12693 GspL periplasmic domain IXK98_RS09105 PF04612 Type II secretion system (T2SS), protein M IXK98_RS09110 PF01203 Type II secretion system (T2SS), protein N IXK98_RS09115 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS09115 PF00672 HAMP domain IXK98_RS09120 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS09120 PF00072 Response regulator receiver domain IXK98_RS09125 PF03449 Transcription elongation factor, N-terminal IXK98_RS09125 PF01272 Transcription elongation factor, GreA/GreB, C-term IXK98_RS09135 PF09371 Tex-like protein N-terminal domain IXK98_RS09135 PF00575 S1 RNA binding domain IXK98_RS09135 PF16921 Tex protein YqgF-like domain IXK98_RS09135 PF17674 HHH domain IXK98_RS09145 PF00561 alpha/beta hydrolase fold IXK98_RS09150 PF00156 Phosphoribosyl transferase domain IXK98_RS09155 PF01521 Iron-sulphur cluster biosynthesis IXK98_RS09155 PF01106 NifU-like domain IXK98_RS09160 PF00293 NUDIX domain IXK98_RS09165 PF00459 Inositol monophosphatase family IXK98_RS09170 PF17191 RecG wedge domain IXK98_RS09170 PF00271 Helicase conserved C-terminal domain IXK98_RS09170 PF00270 DEAD/DEAH box helicase IXK98_RS09175 PF12105 SpoU, rRNA methylase, C-terminal IXK98_RS09175 PF00588 SpoU rRNA Methylase family IXK98_RS09180 PF04607 Region found in RelA / SpoT proteins IXK98_RS09180 PF13291 ACT domain IXK98_RS09180 PF02824 TGS domain IXK98_RS09185 PF01192 RNA polymerase Rpb6 IXK98_RS09190 PF00625 Guanylate kinase IXK98_RS09195 PF00860 Permease family IXK98_RS09210 PF03755 YicC-like family, N-terminal region IXK98_RS09210 PF08340 Domain of unknown function (DUF1732) IXK98_RS09215 PF01138 3' exoribonuclease family, domain 1 IXK98_RS09215 PF03725 3' exoribonuclease family, domain 2 IXK98_RS09220 PF00156 Phosphoribosyl transferase domain IXK98_RS09225 PF03279 Bacterial lipid A biosynthesis acyltransferase IXK98_RS09230 PF03279 Bacterial lipid A biosynthesis acyltransferase IXK98_RS09235 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS09240 PF02441 Flavoprotein IXK98_RS09240 PF04127 DNA / pantothenate metabolism flavoprotein IXK98_RS09245 PF04002 RadC-like JAB domain IXK98_RS09250 PF00830 Ribosomal L28 family IXK98_RS09255 PF00471 Ribosomal protein L33 IXK98_RS09265 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain IXK98_RS09265 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain IXK98_RS09265 PF06827 Zinc finger found in FPG and IleRS IXK98_RS09270 PF01467 Cytidylyltransferase-like IXK98_RS09275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IXK98_RS09280 PF00535 Glycosyl transferase family 2 IXK98_RS09285 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IXK98_RS09305 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase IXK98_RS09310 PF04321 RmlD substrate binding domain IXK98_RS09315 PF00483 Nucleotidyl transferase IXK98_RS09320 PF16363 GDP-mannose 4,6 dehydratase IXK98_RS09325 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) IXK98_RS09330 PF04488 Glycosyltransferase sugar-binding region containing DXD motif IXK98_RS09335 PF01075 Glycosyltransferase family 9 (heptosyltransferase) IXK98_RS09350 PF01370 NAD dependent epimerase/dehydratase family IXK98_RS09355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IXK98_RS09355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXK98_RS09360 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IXK98_RS09360 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IXK98_RS09360 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IXK98_RS09365 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS09370 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IXK98_RS09380 PF02719 Polysaccharide biosynthesis protein IXK98_RS09385 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family IXK98_RS09390 PF02348 Cytidylyltransferase IXK98_RS09400 PF03102 NeuB family IXK98_RS09400 PF08666 SAF domain IXK98_RS09405 PF06508 Queuosine biosynthesis protein QueC IXK98_RS09410 PF00117 Glutamine amidotransferase class-I IXK98_RS09415 PF00977 Histidine biosynthesis protein IXK98_RS09450 PF00117 Glutamine amidotransferase class-I IXK98_RS09455 PF00977 Histidine biosynthesis protein IXK98_RS09465 PF01757 Acyltransferase family IXK98_RS09470 PF00534 Glycosyl transferases group 1 IXK98_RS09475 PF01370 NAD dependent epimerase/dehydratase family IXK98_RS09480 PF02397 Bacterial sugar transferase IXK98_RS09485 PF02719 Polysaccharide biosynthesis protein IXK98_RS09490 PF13091 PLD-like domain IXK98_RS09495 PF03099 Biotin/lipoate A/B protein ligase family IXK98_RS09495 PF08279 HTH domain IXK98_RS09495 PF02237 Biotin protein ligase C terminal domain IXK98_RS09500 PF01565 FAD binding domain IXK98_RS09500 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain IXK98_RS09520 PF02706 Chain length determinant protein IXK98_RS09525 PF00166 Chaperonin 10 Kd subunit IXK98_RS09530 PF00118 TCP-1/cpn60 chaperonin family IXK98_RS09535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain IXK98_RS09535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain IXK98_RS09535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain IXK98_RS09540 PF03167 Uracil DNA glycosylase superfamily IXK98_RS09545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXK98_RS09550 PF04222 Protein of unknown function (DUF416) IXK98_RS09555 PF00571 CBS domain IXK98_RS09555 PF01595 Cyclin M transmembrane N-terminal domain IXK98_RS09560 PF00216 Bacterial DNA-binding protein IXK98_RS09570 PF02843 Phosphoribosylglycinamide synthetase, C domain IXK98_RS09570 PF02844 Phosphoribosylglycinamide synthetase, N domain IXK98_RS09570 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain IXK98_RS09575 PF02142 MGS-like domain IXK98_RS09575 PF01808 AICARFT/IMPCHase bienzyme IXK98_RS09580 PF13411 MerR HTH family regulatory protein IXK98_RS09585 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS09585 PF05230 MASE2 domain IXK98_RS09590 PF02954 Bacterial regulatory protein, Fis family IXK98_RS09595 PF01207 Dihydrouridine synthase (Dus) IXK98_RS09605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IXK98_RS09605 PF00289 Biotin carboxylase, N-terminal domain IXK98_RS09605 PF02785 Biotin carboxylase C-terminal domain IXK98_RS09610 PF00364 Biotin-requiring enzyme IXK98_RS09615 PF01220 Dehydroquinase class II IXK98_RS09620 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS09620 PF16177 Acetyl-coenzyme A synthetase N-terminus IXK98_RS09620 PF00501 AMP-binding enzyme IXK98_RS09635 PF12832 MFS_1 like family IXK98_RS09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS09640 PF09308 LuxQ, periplasmic IXK98_RS09640 PF00072 Response regulator receiver domain IXK98_RS09640 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS09650 PF00474 Sodium:solute symporter family IXK98_RS09660 PF01914 MarC family integral membrane protein IXK98_RS09665 PF00072 Response regulator receiver domain IXK98_RS09665 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS09670 PF02683 Cytochrome C biogenesis protein transmembrane region IXK98_RS09670 PF11412 Disulphide bond corrector protein DsbC IXK98_RS09675 PF02863 Arginine repressor, C-terminal domain IXK98_RS09675 PF01316 Arginine repressor, DNA binding domain IXK98_RS09680 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IXK98_RS09680 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IXK98_RS09685 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IXK98_RS09685 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IXK98_RS09690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IXK98_RS09690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IXK98_RS09705 PF03606 C4-dicarboxylate anaerobic carrier IXK98_RS09710 PF03605 Anaerobic c4-dicarboxylate membrane transporter IXK98_RS09715 PF10415 Fumarase C C-terminus IXK98_RS09715 PF00206 Lyase IXK98_RS09730 PF00117 Glutamine amidotransferase class-I IXK98_RS09735 PF00202 Aminotransferase class-III IXK98_RS09740 PF04958 Arginine N-succinyltransferase beta subunit IXK98_RS09745 PF00171 Aldehyde dehydrogenase family IXK98_RS09755 PF13545 Crp-like helix-turn-helix domain IXK98_RS09755 PF00027 Cyclic nucleotide-binding domain IXK98_RS09760 PF00485 Phosphoribulokinase / Uridine kinase family IXK98_RS09765 PF06794 Uncharacterised protein family (UPF0270) IXK98_RS09770 PF00561 alpha/beta hydrolase fold IXK98_RS09780 PF12848 ABC transporter IXK98_RS09780 PF00005 ABC transporter IXK98_RS09785 PF02525 Flavodoxin-like fold IXK98_RS09790 PF02254 TrkA-N domain IXK98_RS09790 PF00999 Sodium/hydrogen exchanger family IXK98_RS09795 PF09526 Probable metal-binding protein (DUF2387) IXK98_RS09800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXK98_RS09805 PF01112 Asparaginase IXK98_RS09810 PF00709 Adenylosuccinate synthetase IXK98_RS09815 PF08238 Sel1 repeat IXK98_RS09820 PF01979 Amidohydrolase family IXK98_RS09825 PF17876 Cold shock domain IXK98_RS09825 PF08461 Ribonuclease R winged-helix domain IXK98_RS09825 PF08206 Ribonuclease B OB domain IXK98_RS09825 PF00773 RNB domain IXK98_RS09825 PF00575 S1 RNA binding domain IXK98_RS09830 PF00588 SpoU rRNA Methylase family IXK98_RS09830 PF08032 RNA 2'-O ribose methyltransferase substrate binding IXK98_RS09835 PF00338 Ribosomal protein S10p/S20e IXK98_RS09840 PF00297 Ribosomal protein L3 IXK98_RS09845 PF00573 Ribosomal protein L4/L1 family IXK98_RS09850 PF00276 Ribosomal protein L23 IXK98_RS09855 PF03947 Ribosomal Proteins L2, C-terminal domain IXK98_RS09855 PF00181 Ribosomal Proteins L2, RNA binding domain IXK98_RS09860 PF00203 Ribosomal protein S19 IXK98_RS09865 PF00237 Ribosomal protein L22p/L17e IXK98_RS09870 PF07650 KH domain IXK98_RS09870 PF00189 Ribosomal protein S3, C-terminal domain IXK98_RS09875 PF00252 Ribosomal protein L16p/L10e IXK98_RS09880 PF00831 Ribosomal L29 protein IXK98_RS09885 PF00366 Ribosomal protein S17 IXK98_RS09890 PF00238 Ribosomal protein L14p/L23e IXK98_RS09895 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 IXK98_RS09895 PF00467 KOW motif IXK98_RS09900 PF00673 ribosomal L5P family C-terminus IXK98_RS09900 PF00281 Ribosomal protein L5 IXK98_RS09905 PF00253 Ribosomal protein S14p/S29e IXK98_RS09910 PF00410 Ribosomal protein S8 IXK98_RS09915 PF00347 Ribosomal protein L6 IXK98_RS09920 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast IXK98_RS09925 PF03719 Ribosomal protein S5, C-terminal domain IXK98_RS09925 PF00333 Ribosomal protein S5, N-terminal domain IXK98_RS09930 PF00327 Ribosomal protein L30p/L7e IXK98_RS09935 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A IXK98_RS09940 PF00344 SecY translocase IXK98_RS09945 PF00444 Ribosomal protein L36 IXK98_RS09950 PF00416 Ribosomal protein S13/S18 IXK98_RS09955 PF00411 Ribosomal protein S11 IXK98_RS09960 PF00163 Ribosomal protein S4/S9 N-terminal domain IXK98_RS09960 PF01479 S4 domain IXK98_RS09965 PF01000 RNA polymerase Rpb3/RpoA insert domain IXK98_RS09965 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain IXK98_RS09965 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain IXK98_RS09970 PF01196 Ribosomal protein L17 IXK98_RS09980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IXK98_RS09980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXK98_RS09995 PF13673 Acetyltransferase (GNAT) domain IXK98_RS10000 PF13545 Crp-like helix-turn-helix domain IXK98_RS10000 PF00027 Cyclic nucleotide-binding domain IXK98_RS10005 PF00149 Calcineurin-like phosphoesterase IXK98_RS10005 PF02872 5'-nucleotidase, C-terminal domain IXK98_RS10010 PF14824 Sirohaem biosynthesis protein central IXK98_RS10010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXK98_RS10010 PF10414 Sirohaem synthase dimerisation region IXK98_RS10015 PF01507 Phosphoadenosine phosphosulfate reductase family IXK98_RS10025 PF03600 Citrate transporter IXK98_RS10025 PF02080 TrkA-C domain IXK98_RS10040 PF01475 Ferric uptake regulator family IXK98_RS10045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS10045 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXK98_RS10045 PF00072 Response regulator receiver domain IXK98_RS10045 PF01627 Hpt domain IXK98_RS10045 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS10045 PF00672 HAMP domain IXK98_RS10050 PF00072 Response regulator receiver domain IXK98_RS10055 PF01207 Dihydrouridine synthase (Dus) IXK98_RS10075 PF00175 Oxidoreductase NAD-binding domain IXK98_RS10075 PF00258 Flavodoxin IXK98_RS10075 PF00667 FAD binding domain IXK98_RS10080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IXK98_RS10080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IXK98_RS10085 PF01507 Phosphoadenosine phosphosulfate reductase family IXK98_RS10145 PF00999 Sodium/hydrogen exchanger family IXK98_RS10150 PF02310 B12 binding domain IXK98_RS10150 PF02607 B12 binding domain IXK98_RS10150 PF02965 Vitamin B12 dependent methionine synthase, activation domain IXK98_RS10150 PF02574 Homocysteine S-methyltransferase IXK98_RS10150 PF00809 Pterin binding enzyme IXK98_RS10160 PF00381 PTS HPr component phosphorylation site IXK98_RS10165 PF03668 P-loop ATPase protein family IXK98_RS10170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXK98_RS10175 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IXK98_RS10180 PF04963 Sigma-54 factor, core binding domain IXK98_RS10180 PF04552 Sigma-54, DNA binding domain IXK98_RS10180 PF00309 Sigma-54 factor, Activator interacting domain (AID) IXK98_RS10185 PF12399 Branched-chain amino acid ATP-binding cassette transporter IXK98_RS10185 PF00005 ABC transporter IXK98_RS10190 PF03968 OstA-like protein IXK98_RS10205 PF00571 CBS domain IXK98_RS10205 PF01380 SIS domain IXK98_RS10210 PF01699 Sodium/calcium exchanger protein IXK98_RS10215 PF00005 ABC transporter IXK98_RS10220 PF02405 Permease MlaE IXK98_RS10225 PF02470 MlaD protein IXK98_RS10230 PF05494 MlaC protein IXK98_RS10235 PF13466 STAS domain IXK98_RS10240 PF01722 BolA-like protein IXK98_RS10245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IXK98_RS10250 PF01553 Acyltransferase IXK98_RS10290 PF17200 Single Cache domain 2 IXK98_RS10290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS10290 PF00672 HAMP domain IXK98_RS10315 PF01464 Transglycosylase SLT domain IXK98_RS10315 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain IXK98_RS10320 PF04362 Bacterial Fe(2+) trafficking IXK98_RS10325 PF00730 HhH-GPD superfamily base excision DNA repair protein IXK98_RS10325 PF00633 Helix-hairpin-helix motif IXK98_RS10325 PF14815 NUDIX domain IXK98_RS10325 PF10576 Iron-sulfur binding domain of endonuclease III IXK98_RS10330 PF02390 Putative methyltransferase IXK98_RS10335 PF04960 Glutaminase IXK98_RS10340 PF04055 Radical SAM superfamily IXK98_RS10340 PF06969 HemN C-terminal domain IXK98_RS10345 PF01725 Ham1 family IXK98_RS10355 PF02594 Uncharacterised ACR, YggU family COG1872 IXK98_RS10360 PF02325 YGGT family IXK98_RS10365 PF14748 Pyrroline-5-carboxylate reductase dimerisation IXK98_RS10365 PF03807 NADP oxidoreductase coenzyme F420-dependent IXK98_RS10370 PF01168 Alanine racemase, N-terminal domain IXK98_RS10375 PF00437 Type II/IV secretion system protein IXK98_RS10380 PF00437 Type II/IV secretion system protein IXK98_RS10390 PF17910 FeoB cytosolic helical domain IXK98_RS10390 PF07664 Ferrous iron transport protein B C terminus IXK98_RS10390 PF07670 Nucleoside recognition IXK98_RS10390 PF02421 Ferrous iron transport protein B IXK98_RS10390 PF04023 FeoA domain IXK98_RS10415 PF00005 ABC transporter IXK98_RS10425 PF03652 Holliday junction resolvase IXK98_RS10430 PF02622 Uncharacterized ACR, COG1678 IXK98_RS10435 PF02951 Prokaryotic glutathione synthetase, N-terminal domain IXK98_RS10435 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain IXK98_RS10440 PF04452 RNA methyltransferase IXK98_RS10445 PF04231 Endonuclease I IXK98_RS10450 PF17283 SprT-like zinc ribbon domain IXK98_RS10450 PF10263 SprT-like family IXK98_RS10460 PF02773 S-adenosylmethionine synthetase, C-terminal domain IXK98_RS10460 PF00438 S-adenosylmethionine synthetase, N-terminal domain IXK98_RS10460 PF02772 S-adenosylmethionine synthetase, central domain IXK98_RS10465 PF02779 Transketolase, pyrimidine binding domain IXK98_RS10465 PF02780 Transketolase, C-terminal domain IXK98_RS10465 PF00456 Transketolase, thiamine diphosphate binding domain IXK98_RS10475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IXK98_RS10475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IXK98_RS10480 PF00162 Phosphoglycerate kinase IXK98_RS10485 PF01116 Fructose-bisphosphate aldolase class-II IXK98_RS10490 PF00924 Mechanosensitive ion channel IXK98_RS10490 PF05552 Conserved TM helix IXK98_RS10500 PF01810 LysE type translocator IXK98_RS10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS10505 PF03466 LysR substrate binding domain IXK98_RS10510 PF04402 Protein of unknown function (DUF541) IXK98_RS10515 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS10525 PF02887 Pyruvate kinase, alpha/beta domain IXK98_RS10525 PF00224 Pyruvate kinase, barrel domain IXK98_RS10530 PF08220 DeoR-like helix-turn-helix domain IXK98_RS10530 PF00455 DeoR C terminal sensor domain IXK98_RS10535 PF01380 SIS domain IXK98_RS10540 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS10545 PF05068 Mannitol repressor IXK98_RS10550 PF01232 Mannitol dehydrogenase Rossmann domain IXK98_RS10550 PF08125 Mannitol dehydrogenase C-terminal domain IXK98_RS10555 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IXK98_RS10555 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXK98_RS10555 PF02378 Phosphotransferase system, EIIC IXK98_RS10560 PF03480 Bacterial extracellular solute-binding protein, family 7 IXK98_RS10570 PF00348 Polyprenyl synthetase IXK98_RS10575 PF00829 Ribosomal prokaryotic L21 protein IXK98_RS10580 PF01016 Ribosomal L27 protein IXK98_RS10585 PF01018 GTP1/OBG IXK98_RS10585 PF01926 50S ribosome-binding GTPase IXK98_RS10590 PF06738 Putative threonine/serine exporter IXK98_RS10590 PF12821 Threonine/Serine exporter, ThrE IXK98_RS10595 PF12821 Threonine/Serine exporter, ThrE IXK98_RS10600 PF00186 Dihydrofolate reductase IXK98_RS10605 PF00149 Calcineurin-like phosphoesterase IXK98_RS10610 PF04379 ApaG domain IXK98_RS10615 PF00398 Ribosomal RNA adenine dimethylase IXK98_RS10620 PF04166 Pyridoxal phosphate biosynthetic protein PdxA IXK98_RS10625 PF00639 PPIC-type PPIASE domain IXK98_RS10625 PF09312 SurA N-terminal domain IXK98_RS10630 PF04453 LPS transport system D IXK98_RS10630 PF03968 OstA-like protein IXK98_RS10635 PF05099 Tellurite resistance protein TerB IXK98_RS10635 PF00226 DnaJ domain IXK98_RS10640 PF00589 Phage integrase family IXK98_RS10665 PF05840 Bacteriophage replication gene A protein (GPA) IXK98_RS10710 PF04542 Sigma-70 region 2 IXK98_RS10710 PF04546 Sigma-70, non-essential region IXK98_RS10710 PF00140 Sigma-70 factor, region 1.2 IXK98_RS10710 PF03979 Sigma-70 factor, region 1.1 IXK98_RS10710 PF04545 Sigma-70, region 4 IXK98_RS10710 PF04539 Sigma-70 region 3 IXK98_RS10715 PF10410 DnaB-helicase binding domain of primase IXK98_RS10715 PF08278 DNA primase DnaG DnaB-binding IXK98_RS10715 PF08275 DNA primase catalytic core, N-terminal domain IXK98_RS10715 PF01807 CHC2 zinc finger IXK98_RS10720 PF09424 Yqey-like protein IXK98_RS10725 PF01165 Ribosomal protein S21 IXK98_RS10730 PF00814 Glycoprotease family IXK98_RS10735 PF00561 alpha/beta hydrolase fold IXK98_RS10740 PF02660 Glycerol-3-phosphate acyltransferase IXK98_RS10745 PF02152 Dihydroneopterin aldolase IXK98_RS10750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IXK98_RS10755 PF02673 Bacitracin resistance protein BacA IXK98_RS10760 PF04977 Septum formation initiator IXK98_RS10765 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IXK98_RS10770 PF02542 YgbB family IXK98_RS10775 PF01142 tRNA pseudouridine synthase D (TruD) IXK98_RS10780 PF01975 Survival protein SurE IXK98_RS10790 PF01476 LysM domain IXK98_RS10790 PF01551 Peptidase family M23 IXK98_RS10795 PF04545 Sigma-70, region 4 IXK98_RS10795 PF04539 Sigma-70 region 3 IXK98_RS10795 PF04542 Sigma-70 region 2 IXK98_RS10795 PF00140 Sigma-70 factor, region 1.2 IXK98_RS10800 PF01595 Cyclin M transmembrane N-terminal domain IXK98_RS10800 PF03471 Transporter associated domain IXK98_RS10800 PF00571 CBS domain IXK98_RS10805 PF01578 Cytochrome C assembly protein IXK98_RS10810 PF02881 SRP54-type protein, helical bundle domain IXK98_RS10810 PF02978 Signal peptide binding domain IXK98_RS10810 PF00448 SRP54-type protein, GTPase domain IXK98_RS10815 PF00886 Ribosomal protein S16 IXK98_RS10820 PF01782 RimM N-terminal domain IXK98_RS10820 PF05239 PRC-barrel domain IXK98_RS10825 PF01746 tRNA (Guanine-1)-methyltransferase IXK98_RS10830 PF01245 Ribosomal protein L19 IXK98_RS10835 PF03884 DNA gyrase inhibitor YacG IXK98_RS10840 PF07072 Cell division protein IXK98_RS10845 PF01121 Dephospho-CoA kinase IXK98_RS10850 PF06750 Bacterial Peptidase A24 N-terminal domain IXK98_RS10850 PF01478 Type IV leader peptidase family IXK98_RS10855 PF00482 Type II secretion system (T2SS), protein F IXK98_RS10860 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IXK98_RS10860 PF00437 Type II/IV secretion system protein IXK98_RS10865 PF07963 Prokaryotic N-terminal methylation motif IXK98_RS10865 PF00114 Pilin (bacterial filament) IXK98_RS10870 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain IXK98_RS10870 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain IXK98_RS10875 PF01510 N-acetylmuramoyl-L-alanine amidase IXK98_RS10880 PF00258 Flavodoxin IXK98_RS10885 PF02899 Phage integrase, N-terminal SAM-like domain IXK98_RS10885 PF00589 Phage integrase family IXK98_RS10890 PF10411 Disulfide bond isomerase protein N-terminus IXK98_RS10890 PF13098 Thioredoxin-like domain IXK98_RS10895 PF01368 DHH family IXK98_RS10895 PF17768 RecJ OB domain IXK98_RS10895 PF02272 DHHA1 domain IXK98_RS10900 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS10900 PF07729 FCD domain IXK98_RS10905 PF00456 Transketolase, thiamine diphosphate binding domain IXK98_RS10905 PF17831 Pyruvate dehydrogenase E1 component middle domain IXK98_RS10910 PF02817 e3 binding domain IXK98_RS10910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IXK98_RS10910 PF00364 Biotin-requiring enzyme IXK98_RS10915 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS10915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IXK98_RS10920 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS10925 PF00156 Phosphoribosyl transferase domain IXK98_RS10930 PF00484 Carbonic anhydrase IXK98_RS10935 PF01740 STAS domain IXK98_RS10935 PF00916 Sulfate permease family IXK98_RS10940 PF00005 ABC transporter IXK98_RS10945 PF01061 ABC-2 type transporter IXK98_RS10950 PF02569 Pantoate-beta-alanine ligase IXK98_RS10955 PF02548 Ketopantoate hydroxymethyltransferase IXK98_RS10960 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) IXK98_RS10965 PF12626 Polymerase A arginine-rich C-terminus IXK98_RS10965 PF01743 Poly A polymerase head domain IXK98_RS10965 PF12627 Probable RNA and SrmB- binding site of polymerase A IXK98_RS10970 PF00749 tRNA synthetases class I (E and Q), catalytic domain IXK98_RS10975 PF01258 Prokaryotic dksA/traR C4-type zinc finger IXK98_RS10980 PF03749 Sugar fermentation stimulation protein RE domain IXK98_RS10980 PF17746 SfsA N-terminal OB domain IXK98_RS10985 PF00270 DEAD/DEAH box helicase IXK98_RS10985 PF08482 ATP-dependent helicase C-terminal IXK98_RS10985 PF04408 Helicase associated domain (HA2) IXK98_RS10985 PF00271 Helicase conserved C-terminal domain IXK98_RS10990 PF14814 Bifunctional transglycosylase second domain IXK98_RS10990 PF00912 Transglycosylase IXK98_RS10990 PF00905 Penicillin binding protein transpeptidase domain IXK98_RS10995 PF01734 Patatin-like phospholipase IXK98_RS11000 PF06434 Aconitate hydratase 2 N-terminus IXK98_RS11000 PF00330 Aconitase family (aconitate hydratase) IXK98_RS11000 PF11791 Aconitate B N-terminal domain IXK98_RS11005 PF06062 Uncharacterised protein family (UPF0231) IXK98_RS11010 PF00543 Nitrogen regulatory protein P-II IXK98_RS11020 PF13416 Bacterial extracellular solute-binding protein IXK98_RS11030 PF00005 ABC transporter IXK98_RS11030 PF08402 TOBE domain IXK98_RS11035 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXK98_RS11035 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXK98_RS11035 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXK98_RS11035 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXK98_RS11040 PF06165 Glycosyltransferase family 36 IXK98_RS11040 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain IXK98_RS11045 PF00728 Glycosyl hydrolase family 20, catalytic domain IXK98_RS11045 PF02838 Glycosyl hydrolase family 20, domain 2 IXK98_RS11050 PF01869 BadF/BadG/BcrA/BcrD ATPase family IXK98_RS11060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS11060 PF00005 ABC transporter IXK98_RS11065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS11065 PF00005 ABC transporter IXK98_RS11070 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS11070 PF12911 N-terminal TM domain of oligopeptide transport permease C IXK98_RS11075 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS11080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS11085 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS11085 PF00072 Response regulator receiver domain IXK98_RS11085 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS11090 PF05175 Methyltransferase small domain IXK98_RS11090 PF08468 Methyltransferase small domain N-terminal IXK98_RS11095 PF01594 AI-2E family transporter IXK98_RS11100 PF00202 Aminotransferase class-III IXK98_RS11105 PF01521 Iron-sulphur cluster biosynthesis IXK98_RS11115 PF00873 AcrB/AcrD/AcrF family IXK98_RS11120 PF08525 Opacity-associated protein A N-terminal motif IXK98_RS11120 PF01551 Peptidase family M23 IXK98_RS11120 PF01476 LysM domain IXK98_RS11125 PF00579 tRNA synthetases class I (W and Y) IXK98_RS11135 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family IXK98_RS11140 PF13609 Gram-negative porin IXK98_RS11145 PF01272 Transcription elongation factor, GreA/GreB, C-term IXK98_RS11145 PF03449 Transcription elongation factor, N-terminal IXK98_RS11150 PF01985 CRS1 / YhbY (CRM) domain IXK98_RS11155 PF01728 FtsJ-like methyltransferase IXK98_RS11160 PF00004 ATPase family associated with various cellular activities (AAA) IXK98_RS11160 PF17862 AAA+ lid domain IXK98_RS11160 PF01434 Peptidase family M41 IXK98_RS11160 PF06480 FtsH Extracellular IXK98_RS11165 PF00809 Pterin binding enzyme IXK98_RS11170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXK98_RS11170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXK98_RS11170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXK98_RS11170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXK98_RS11180 PF00583 Acetyltransferase (GNAT) family IXK98_RS11185 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS11185 PF00563 EAL domain IXK98_RS11185 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS11190 PF00009 Elongation factor Tu GTP binding domain IXK98_RS11190 PF03144 Elongation factor Tu domain 2 IXK98_RS11190 PF16658 Class II release factor RF3, C-terminal domain IXK98_RS11195 PF00271 Helicase conserved C-terminal domain IXK98_RS11195 PF00270 DEAD/DEAH box helicase IXK98_RS11200 PF05175 Methyltransferase small domain IXK98_RS11205 PF05525 Branched-chain amino acid transport protein IXK98_RS11215 PF01336 OB-fold nucleic acid binding domain IXK98_RS11215 PF00152 tRNA synthetases class II (D, K and N) IXK98_RS11220 PF00158 Sigma-54 interaction domain IXK98_RS11220 PF02954 Bacterial regulatory protein, Fis family IXK98_RS11220 PF00072 Response regulator receiver domain IXK98_RS11230 PF00248 Aldo/keto reductase family IXK98_RS11240 PF02976 DNA mismatch repair enzyme MutH IXK98_RS11245 PF00293 NUDIX domain IXK98_RS11250 PF00391 PEP-utilising enzyme, mobile domain IXK98_RS11250 PF02896 PEP-utilising enzyme, TIM barrel domain IXK98_RS11250 PF05524 PEP-utilising enzyme, N-terminal IXK98_RS11250 PF01590 GAF domain IXK98_RS11255 PF01925 Sulfite exporter TauE/SafE IXK98_RS11260 PF01790 Prolipoprotein diacylglyceryl transferase IXK98_RS11265 PF00303 Thymidylate synthase IXK98_RS11270 PF02690 Na+/Pi-cotransporter IXK98_RS11275 PF03466 LysR substrate binding domain IXK98_RS11275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS11280 PF01022 Bacterial regulatory protein, arsR family IXK98_RS11285 PF01649 Ribosomal protein S20 IXK98_RS11290 PF03023 Lipid II flippase MurJ IXK98_RS11295 PF01687 Riboflavin kinase IXK98_RS11295 PF06574 FAD synthetase IXK98_RS11300 PF06827 Zinc finger found in FPG and IleRS IXK98_RS11300 PF08264 Anticodon-binding domain of tRNA IXK98_RS11300 PF00133 tRNA synthetases class I (I, L, M and V) IXK98_RS11305 PF01252 Signal peptidase (SPase) II IXK98_RS11310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXK98_RS11315 PF02401 LytB protein IXK98_RS11320 PF00675 Insulinase (Peptidase family M16) IXK98_RS11320 PF05193 Peptidase M16 inactive domain IXK98_RS11325 PF02554 Carbon starvation protein CstA IXK98_RS11335 PF13580 SIS domain IXK98_RS11340 PF03702 Anhydro-N-acetylmuramic acid kinase IXK98_RS11345 PF00933 Glycosyl hydrolase family 3 N terminal domain IXK98_RS11350 PF04397 LytTr DNA-binding domain IXK98_RS11350 PF00072 Response regulator receiver domain IXK98_RS11355 PF06580 Histidine kinase IXK98_RS11355 PF07694 5TMR of 5TMR-LYT IXK98_RS11360 PF00793 DAHP synthetase I family IXK98_RS11365 PF02153 Prephenate dehydrogenase IXK98_RS11365 PF01817 Chorismate mutase type II IXK98_RS11370 PF04225 Opacity-associated protein A LysM-like domain IXK98_RS11370 PF01551 Peptidase family M23 IXK98_RS11375 PF07238 PilZ domain IXK98_RS11380 PF00005 ABC transporter IXK98_RS11380 PF12848 ABC transporter IXK98_RS11385 PF14718 Soluble lytic murein transglycosylase L domain IXK98_RS11385 PF01464 Transglycosylase SLT domain IXK98_RS11390 PF01371 Trp repressor protein IXK98_RS11395 PF01931 Protein of unknown function DUF84 IXK98_RS11400 PF00563 EAL domain IXK98_RS11400 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS11405 PF13416 Bacterial extracellular solute-binding protein IXK98_RS11410 PF01817 Chorismate mutase type II IXK98_RS11410 PF00800 Prephenate dehydratase IXK98_RS11415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein IXK98_RS11420 PF01464 Transglycosylase SLT domain IXK98_RS11420 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS11425 PF13525 Outer membrane lipoprotein IXK98_RS11430 PF00849 RNA pseudouridylate synthase IXK98_RS11430 PF01479 S4 domain IXK98_RS11435 PF02578 Multi-copper polyphenol oxidoreductase laccase IXK98_RS11440 PF02861 Clp amino terminal domain, pathogenicity island component IXK98_RS11440 PF10431 C-terminal, D2-small domain, of ClpB protein IXK98_RS11440 PF00004 ATPase family associated with various cellular activities (AAA) IXK98_RS11440 PF07724 AAA domain (Cdc48 subfamily) IXK98_RS11440 PF17871 AAA lid domain IXK98_RS11485 PF00459 Inositol monophosphatase family IXK98_RS11490 PF00588 SpoU rRNA Methylase family IXK98_RS11495 PF02082 Transcriptional regulator IXK98_RS11500 PF00266 Aminotransferase class-V IXK98_RS11505 PF01592 NifU-like N terminal domain IXK98_RS11510 PF01521 Iron-sulphur cluster biosynthesis IXK98_RS11515 PF00226 DnaJ domain IXK98_RS11515 PF07743 HSCB C-terminal oligomerisation domain IXK98_RS11520 PF00012 Hsp70 protein IXK98_RS11525 PF00111 2Fe-2S iron-sulfur cluster binding domain IXK98_RS11530 PF04384 Iron-sulphur cluster assembly IXK98_RS11535 PF12404 Peptidase IXK98_RS11535 PF00883 Cytosol aminopeptidase family, catalytic domain IXK98_RS11540 PF00334 Nucleoside diphosphate kinase IXK98_RS11545 PF00679 Elongation factor G C-terminus IXK98_RS11545 PF14492 Elongation Factor G, domain II IXK98_RS11545 PF03764 Elongation factor G, domain IV IXK98_RS11545 PF00009 Elongation factor Tu GTP binding domain IXK98_RS11545 PF03144 Elongation factor Tu domain 2 IXK98_RS11550 PF03466 LysR substrate binding domain IXK98_RS11550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS11560 PF03466 LysR substrate binding domain IXK98_RS11560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS11565 PF00501 AMP-binding enzyme IXK98_RS11570 PF02805 Metal binding domain of Ada IXK98_RS11570 PF12833 Helix-turn-helix domain IXK98_RS11600 PF04972 BON domain IXK98_RS11600 PF00263 Bacterial type II and III secretion system protein IXK98_RS11600 PF13629 Pilus formation protein N terminal region IXK98_RS11615 PF00437 Type II/IV secretion system protein IXK98_RS11640 PF03466 LysR substrate binding domain IXK98_RS11640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS11645 PF17912 MalK OB fold domain IXK98_RS11645 PF00005 ABC transporter IXK98_RS11650 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS11655 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS11660 PF01547 Bacterial extracellular solute-binding protein IXK98_RS11665 PF16353 Domain of unknown function(DUF4981) IXK98_RS11665 PF02837 Glycosyl hydrolases family 2, sugar binding domain IXK98_RS11665 PF02929 Beta galactosidase small chain IXK98_RS11665 PF00703 Glycosyl hydrolases family 2 IXK98_RS11665 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IXK98_RS11670 PF16875 Glycosyl hydrolase family 36 N-terminal domain IXK98_RS11670 PF16874 Glycosyl hydrolase family 36 C-terminal domain IXK98_RS11675 PF01204 Trehalase IXK98_RS11680 PF07883 Cupin domain IXK98_RS11680 PF12833 Helix-turn-helix domain IXK98_RS11705 PF13520 Amino acid permease IXK98_RS11710 PF04074 YhcH/YjgK/YiaL IXK98_RS11715 PF02837 Glycosyl hydrolases family 2, sugar binding domain IXK98_RS11715 PF02836 Glycosyl hydrolases family 2, TIM barrel domain IXK98_RS11715 PF16353 Domain of unknown function(DUF4981) IXK98_RS11715 PF00703 Glycosyl hydrolases family 2 IXK98_RS11715 PF02929 Beta galactosidase small chain IXK98_RS11720 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS11725 PF16363 GDP-mannose 4,6 dehydratase IXK98_RS11730 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain IXK98_RS11730 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain IXK98_RS11735 PF00288 GHMP kinases N terminal domain IXK98_RS11735 PF08544 GHMP kinases C terminal IXK98_RS11735 PF10509 Galactokinase galactose-binding signature IXK98_RS11740 PF01263 Aldose 1-epimerase IXK98_RS11750 PF10417 C-terminal domain of 1-Cys peroxiredoxin IXK98_RS11750 PF00578 AhpC/TSA family IXK98_RS11755 PF13192 Thioredoxin domain IXK98_RS11755 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS11760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS11760 PF03466 LysR substrate binding domain IXK98_RS11765 PF00248 Aldo/keto reductase family IXK98_RS11770 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS11775 PF01588 Putative tRNA binding domain IXK98_RS11790 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IXK98_RS11790 PF01266 FAD dependent oxidoreductase IXK98_RS11795 PF00455 DeoR C terminal sensor domain IXK98_RS11795 PF08220 DeoR-like helix-turn-helix domain IXK98_RS11800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IXK98_RS11800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IXK98_RS11805 PF07690 Major Facilitator Superfamily IXK98_RS11810 PF14602 Hexapeptide repeat of succinyl-transferase IXK98_RS11810 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle IXK98_RS11815 PF00578 AhpC/TSA family IXK98_RS11815 PF10417 C-terminal domain of 1-Cys peroxiredoxin IXK98_RS11820 PF03466 LysR substrate binding domain IXK98_RS11820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS11825 PF01274 Malate synthase IXK98_RS11830 PF00463 Isocitrate lyase family IXK98_RS11835 PF00571 CBS domain IXK98_RS11840 PF02547 Queuosine biosynthesis protein IXK98_RS11845 PF01702 Queuine tRNA-ribosyltransferase IXK98_RS11850 PF02699 Preprotein translocase subunit IXK98_RS11855 PF13721 SecD export protein N-terminal TM region IXK98_RS11855 PF02355 Protein export membrane protein IXK98_RS11855 PF07549 SecD/SecF GG Motif IXK98_RS11860 PF07549 SecD/SecF GG Motif IXK98_RS11860 PF02355 Protein export membrane protein IXK98_RS11870 PF13407 Periplasmic binding protein domain IXK98_RS11880 PF03411 Penicillin-insensitive murein endopeptidase IXK98_RS11885 PF12838 4Fe-4S dicluster domain IXK98_RS11890 PF16325 Peptidase family U32 C-terminal domain IXK98_RS11890 PF01136 Peptidase family U32 IXK98_RS11895 PF04381 Putative exonuclease, RdgC IXK98_RS11900 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS11900 PF00072 Response regulator receiver domain IXK98_RS11905 PF11808 Phosphate regulon sensor protein PhoR IXK98_RS11905 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS11905 PF00989 PAS fold IXK98_RS11905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS11910 PF12849 PBP superfamily domain IXK98_RS11915 PF02541 Ppx/GppA phosphatase family IXK98_RS11920 PF13089 Polyphosphate kinase N-terminal domain IXK98_RS11920 PF13090 Polyphosphate kinase C-terminal domain 2 IXK98_RS11920 PF02503 Polyphosphate kinase middle domain IXK98_RS11920 PF17941 Polyphosphate kinase C-terminal domain 1 IXK98_RS11925 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS11930 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS11935 PF00005 ABC transporter IXK98_RS11940 PF01895 PhoU domain IXK98_RS11960 PF03466 LysR substrate binding domain IXK98_RS11960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS11965 PF03932 CutC family IXK98_RS11970 PF07130 YebG protein IXK98_RS11975 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS11980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS11980 PF00529 HlyD membrane-fusion protein of T1SS IXK98_RS11985 PF00873 AcrB/AcrD/AcrF family IXK98_RS11990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS11990 PF03466 LysR substrate binding domain IXK98_RS12000 PF02954 Bacterial regulatory protein, Fis family IXK98_RS12000 PF00158 Sigma-54 interaction domain IXK98_RS12000 PF01590 GAF domain IXK98_RS12005 PF17912 MalK OB fold domain IXK98_RS12005 PF00005 ABC transporter IXK98_RS12010 PF17912 MalK OB fold domain IXK98_RS12010 PF00005 ABC transporter IXK98_RS12015 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS12020 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS12035 PF17946 RecC C-terminal domain IXK98_RS12040 PF00580 UvrD/REP helicase N-terminal domain IXK98_RS12040 PF13361 UvrD-like helicase C-terminal domain IXK98_RS12040 PF12705 PD-(D/E)XK nuclease superfamily IXK98_RS12045 PF13538 UvrD-like helicase C-terminal domain IXK98_RS12055 PF00583 Acetyltransferase (GNAT) family IXK98_RS12055 PF00696 Amino acid kinase family IXK98_RS12065 PF06725 3D domain IXK98_RS12065 PF03562 MltA specific insert domain IXK98_RS12070 PF00899 ThiF family IXK98_RS12075 PF02657 Fe-S metabolism associated domain IXK98_RS12080 PF04055 Radical SAM superfamily IXK98_RS12085 PF13464 Domain of unknown function (DUF4115) IXK98_RS12090 PF04551 GcpE protein IXK98_RS12095 PF13393 Histidyl-tRNA synthetase IXK98_RS12095 PF03129 Anticodon binding domain IXK98_RS12100 PF09976 Tetratricopeptide repeat-like domain IXK98_RS12105 PF13360 PQQ-like domain IXK98_RS12110 PF01926 50S ribosome-binding GTPase IXK98_RS12110 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal IXK98_RS12120 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS12120 PF17151 Periplasmic sensor domain IXK98_RS12130 PF02601 Exonuclease VII, large subunit IXK98_RS12130 PF13742 OB-fold nucleic acid binding domain IXK98_RS12135 PF00478 IMP dehydrogenase / GMP reductase domain IXK98_RS12135 PF00571 CBS domain IXK98_RS12140 PF02540 NAD synthase IXK98_RS12140 PF00958 GMP synthase C terminal domain IXK98_RS12140 PF00117 Glutamine amidotransferase class-I IXK98_RS12145 PF06483 Chitinase C IXK98_RS12145 PF00704 Glycosyl hydrolases family 18 IXK98_RS12150 PF01184 GPR1/FUN34/yaaH family IXK98_RS12155 PF01235 Sodium:alanine symporter family IXK98_RS12160 PF01266 FAD dependent oxidoreductase IXK98_RS12165 PF03466 LysR substrate binding domain IXK98_RS12165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS12170 PF07885 Ion channel IXK98_RS12185 PF01053 Cys/Met metabolism PLP-dependent enzyme IXK98_RS12190 PF03471 Transporter associated domain IXK98_RS12190 PF01595 Cyclin M transmembrane N-terminal domain IXK98_RS12190 PF00571 CBS domain IXK98_RS12195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS12195 PF03466 LysR substrate binding domain IXK98_RS12205 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain IXK98_RS12205 PF10996 Beta-Casp domain IXK98_RS12205 PF00753 Metallo-beta-lactamase superfamily IXK98_RS12210 PF01553 Acyltransferase IXK98_RS12230 PF00924 Mechanosensitive ion channel IXK98_RS12235 PF00082 Subtilase family IXK98_RS12235 PF05922 Peptidase inhibitor I9 IXK98_RS12250 PF01300 Telomere recombination IXK98_RS12250 PF03481 Putative GTP-binding controlling metal-binding IXK98_RS12255 PF01266 FAD dependent oxidoreductase IXK98_RS12260 PF01546 Peptidase family M20/M25/M40 IXK98_RS12260 PF07687 Peptidase dimerisation domain IXK98_RS12265 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXK98_RS12270 PF02028 BCCT, betaine/carnitine/choline family transporter IXK98_RS12285 PF01238 Phosphomannose isomerase type I IXK98_RS12290 PF07690 Major Facilitator Superfamily IXK98_RS12295 PF07730 Histidine kinase IXK98_RS12295 PF05231 MASE1 IXK98_RS12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS12300 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS12300 PF00072 Response regulator receiver domain IXK98_RS12320 PF01668 SmpB protein IXK98_RS12325 PF03364 Polyketide cyclase / dehydrase and lipid transport IXK98_RS12330 PF03658 RnfH family Ubiquitin IXK98_RS12335 PF04355 SmpA / OmlA family IXK98_RS12340 PF02463 RecF/RecN/SMC N terminal domain IXK98_RS12345 PF01513 ATP-NAD kinase IXK98_RS12350 PF01025 GrpE IXK98_RS12355 PF00375 Sodium:dicarboxylate symporter family IXK98_RS12370 PF00012 Hsp70 protein IXK98_RS12375 PF00684 DnaJ central domain IXK98_RS12375 PF00226 DnaJ domain IXK98_RS12375 PF01556 DnaJ C terminal domain IXK98_RS12405 PF03806 AbgT putative transporter family IXK98_RS12415 PF14437 MafB19-like deaminase IXK98_RS12420 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS12420 PF01464 Transglycosylase SLT domain IXK98_RS12425 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain IXK98_RS12425 PF02769 AIR synthase related protein, C-terminal domain IXK98_RS12425 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal IXK98_RS12440 PF06786 Uncharacterised protein family (UPF0253) IXK98_RS12450 PF00551 Formyl transferase IXK98_RS12455 PF02769 AIR synthase related protein, C-terminal domain IXK98_RS12455 PF00586 AIR synthase related protein, N-terminal domain IXK98_RS12465 PF01479 S4 domain IXK98_RS12465 PF00849 RNA pseudouridylate synthase IXK98_RS12470 PF01713 Smr domain IXK98_RS12495 PF02838 Glycosyl hydrolase family 20, domain 2 IXK98_RS12495 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain IXK98_RS12495 PF00728 Glycosyl hydrolase family 20, catalytic domain IXK98_RS12495 PF03173 Putative carbohydrate binding domain IXK98_RS12500 PF00854 POT family IXK98_RS12505 PF00733 Asparagine synthase IXK98_RS12505 PF13537 Glutamine amidotransferase domain IXK98_RS12510 PF02254 TrkA-N domain IXK98_RS12510 PF00999 Sodium/hydrogen exchanger family IXK98_RS12515 PF00480 ROK family IXK98_RS12515 PF01047 MarR family IXK98_RS12520 PF01979 Amidohydrolase family IXK98_RS12525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IXK98_RS12525 PF00367 phosphotransferase system, EIIB IXK98_RS12525 PF02378 Phosphotransferase system, EIIC IXK98_RS12530 PF00749 tRNA synthetases class I (E and Q), catalytic domain IXK98_RS12530 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain IXK98_RS12535 PF01475 Ferric uptake regulator family IXK98_RS12545 PF00258 Flavodoxin IXK98_RS12555 PF12697 Alpha/beta hydrolase family IXK98_RS12560 PF03925 SeqA protein C-terminal domain IXK98_RS12560 PF17206 SeqA protein N-terminal domain IXK98_RS12565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III IXK98_RS12565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I IXK98_RS12565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II IXK98_RS12565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain IXK98_RS12575 PF01784 NIF3 (NGG1p interacting factor 3) IXK98_RS12580 PF00285 Citrate synthase, C-terminal domain IXK98_RS12585 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IXK98_RS12590 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit IXK98_RS12595 PF00890 FAD binding domain IXK98_RS12595 PF02910 Fumarate reductase flavoprotein C-term IXK98_RS12600 PF13085 2Fe-2S iron-sulfur cluster binding domain IXK98_RS12605 PF00676 Dehydrogenase E1 component IXK98_RS12605 PF02779 Transketolase, pyrimidine binding domain IXK98_RS12605 PF16870 2-oxoglutarate dehydrogenase C-terminal IXK98_RS12605 PF16078 2-oxoglutarate dehydrogenase N-terminus IXK98_RS12610 PF00364 Biotin-requiring enzyme IXK98_RS12610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) IXK98_RS12610 PF02817 e3 binding domain IXK98_RS12615 PF00549 CoA-ligase IXK98_RS12615 PF08442 ATP-grasp domain IXK98_RS12620 PF00549 CoA-ligase IXK98_RS12620 PF02629 CoA binding domain IXK98_RS12645 PF04287 tRNA pseudouridine synthase C IXK98_RS12650 PF00849 RNA pseudouridylate synthase IXK98_RS12655 PF06291 Bor protein IXK98_RS12660 PF02780 Transketolase, C-terminal domain IXK98_RS12660 PF02779 Transketolase, pyrimidine binding domain IXK98_RS12660 PF13292 1-deoxy-D-xylulose-5-phosphate synthase IXK98_RS12665 PF00348 Polyprenyl synthetase IXK98_RS12670 PF02609 Exonuclease VII small subunit IXK98_RS12675 PF01618 MotA/TolQ/ExbB proton channel family IXK98_RS12680 PF13677 Membrane MotB of proton-channel complex MotA/MotB IXK98_RS12680 PF00691 OmpA family IXK98_RS12685 PF02568 Thiamine biosynthesis protein (ThiI) IXK98_RS12685 PF02926 THUMP domain IXK98_RS12690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS12690 PF03466 LysR substrate binding domain IXK98_RS12700 PF04241 Protein of unknown function (DUF423) IXK98_RS12705 PF18125 RlmM ferredoxin-like domain IXK98_RS12705 PF01728 FtsJ-like methyltransferase IXK98_RS12710 PF01223 DNA/RNA non-specific endonuclease IXK98_RS12715 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IXK98_RS12715 PF01367 5'-3' exonuclease, C-terminal SAM fold IXK98_RS12725 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS12735 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term IXK98_RS12735 PF14489 QueF-like protein IXK98_RS12740 PF07348 Syd protein (SUKH-2) IXK98_RS12745 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) IXK98_RS12755 PF02557 D-alanyl-D-alanine carboxypeptidase IXK98_RS12760 PF07687 Peptidase dimerisation domain IXK98_RS12760 PF01546 Peptidase family M20/M25/M40 IXK98_RS12765 PF03960 ArsC family IXK98_RS12775 PF13698 Domain of unknown function (DUF4156) IXK98_RS12790 PF00106 short chain dehydrogenase IXK98_RS12795 PF02335 Cytochrome c552 IXK98_RS12805 PF13247 4Fe-4S dicluster domain IXK98_RS12810 PF03916 Polysulphide reductase, NrfD IXK98_RS12815 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IXK98_RS12815 PF01578 Cytochrome C assembly protein IXK98_RS12820 PF08534 Redoxin IXK98_RS12825 PF03918 Cytochrome C biogenesis protein IXK98_RS12835 PF11143 Protein of unknown function (DUF2919) IXK98_RS12840 PF04261 Dyp-type peroxidase family IXK98_RS12845 PF07196 Flagellin hook IN motif IXK98_RS12845 PF00669 Bacterial flagellin N-terminal helical region IXK98_RS12845 PF00700 Bacterial flagellin C-terminal helical region IXK98_RS12850 PF00669 Bacterial flagellin N-terminal helical region IXK98_RS12850 PF07196 Flagellin hook IN motif IXK98_RS12850 PF00700 Bacterial flagellin C-terminal helical region IXK98_RS12855 PF00700 Bacterial flagellin C-terminal helical region IXK98_RS12855 PF00669 Bacterial flagellin N-terminal helical region IXK98_RS12855 PF07196 Flagellin hook IN motif IXK98_RS12860 PF03646 FlaG protein IXK98_RS12865 PF07195 Flagellar hook-associated protein 2 C-terminus IXK98_RS12865 PF02465 Flagellar hook-associated protein 2 N-terminus IXK98_RS12865 PF07196 Flagellin hook IN motif IXK98_RS12875 PF02561 Flagellar protein FliS IXK98_RS12880 PF00158 Sigma-54 interaction domain IXK98_RS12880 PF02954 Bacterial regulatory protein, Fis family IXK98_RS12880 PF06490 Flagellar regulatory protein FleQ IXK98_RS12890 PF02954 Bacterial regulatory protein, Fis family IXK98_RS12890 PF00072 Response regulator receiver domain IXK98_RS12890 PF00158 Sigma-54 interaction domain IXK98_RS12895 PF02049 Flagellar hook-basal body complex protein FliE IXK98_RS12900 PF01514 Secretory protein of YscJ/FliF family IXK98_RS12900 PF08345 Flagellar M-ring protein C-terminal IXK98_RS12905 PF14841 FliG middle domain IXK98_RS12905 PF01706 FliG C-terminal domain IXK98_RS12905 PF14842 FliG N-terminal domain IXK98_RS12915 PF18269 T3SS EscN ATPase C-terminal domain IXK98_RS12915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXK98_RS12930 PF03748 Flagellar basal body-associated protein FliL IXK98_RS12935 PF02154 Flagellar motor switch protein FliM IXK98_RS12935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IXK98_RS12940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IXK98_RS12945 PF04347 Flagellar biosynthesis protein, FliO IXK98_RS12950 PF00813 FliP family IXK98_RS12955 PF01313 Bacterial export proteins, family 3 IXK98_RS12960 PF01311 Bacterial export proteins, family 1 IXK98_RS12965 PF01312 FlhB HrpN YscU SpaS Family IXK98_RS12970 PF01713 Smr domain IXK98_RS12975 PF05175 Methyltransferase small domain IXK98_RS12980 PF01264 Chorismate synthase IXK98_RS12985 PF00149 Calcineurin-like phosphoesterase IXK98_RS12985 PF02872 5'-nucleotidase, C-terminal domain IXK98_RS12995 PF03458 UPF0126 domain IXK98_RS13000 PF04315 Elongation factor P hydroxylase IXK98_RS13015 PF08891 YfcL protein IXK98_RS13020 PF03358 NADPH-dependent FMN reductase IXK98_RS13025 PF05430 S-adenosyl-L-methionine-dependent methyltransferase IXK98_RS13025 PF01266 FAD dependent oxidoreductase IXK98_RS13030 PF02801 Beta-ketoacyl synthase, C-terminal domain IXK98_RS13030 PF00109 Beta-ketoacyl synthase, N-terminal domain IXK98_RS13035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXK98_RS13035 PF11890 Domain of unknown function (DUF3410) IXK98_RS13035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXK98_RS13040 PF01118 Semialdehyde dehydrogenase, NAD binding domain IXK98_RS13040 PF02774 Semialdehyde dehydrogenase, dimerisation domain IXK98_RS13050 PF01416 tRNA pseudouridine synthase IXK98_RS13055 PF17848 Acetyl-coA carboxylase zinc finger domain IXK98_RS13055 PF01039 Carboxyl transferase domain IXK98_RS13060 PF02875 Mur ligase family, glutamate ligase domain IXK98_RS13060 PF08245 Mur ligase middle domain IXK98_RS13065 PF05036 Sporulation related domain IXK98_RS13070 PF02674 Colicin V production protein IXK98_RS13075 PF00156 Phosphoribosyl transferase domain IXK98_RS13080 PF00950 ABC 3 transport family IXK98_RS13085 PF00005 ABC transporter IXK98_RS13090 PF01297 Zinc-uptake complex component A periplasmic IXK98_RS13095 PF02311 AraC-like ligand binding domain IXK98_RS13095 PF12833 Helix-turn-helix domain IXK98_RS13105 PF04023 FeoA domain IXK98_RS13110 PF07664 Ferrous iron transport protein B C terminus IXK98_RS13110 PF07670 Nucleoside recognition IXK98_RS13110 PF02421 Ferrous iron transport protein B IXK98_RS13125 PF05746 DALR anticodon binding domain IXK98_RS13125 PF00750 tRNA synthetases class I (R) IXK98_RS13125 PF03485 Arginyl tRNA synthetase N terminal domain IXK98_RS13135 PF06185 YecM protein IXK98_RS13140 PF05193 Peptidase M16 inactive domain IXK98_RS13140 PF00675 Insulinase (Peptidase family M16) IXK98_RS13140 PF16187 Middle or third domain of peptidase_M16 IXK98_RS13145 PF00300 Histidine phosphatase superfamily (branch 1) IXK98_RS13150 PF00771 FHIPEP family IXK98_RS13155 PF00448 SRP54-type protein, GTPase domain IXK98_RS13160 PF10609 NUBPL iron-transfer P-loop NTPase IXK98_RS13165 PF04539 Sigma-70 region 3 IXK98_RS13165 PF04542 Sigma-70 region 2 IXK98_RS13165 PF04545 Sigma-70, region 4 IXK98_RS13170 PF00072 Response regulator receiver domain IXK98_RS13175 PF04344 Chemotaxis phosphatase, CheZ IXK98_RS13180 PF02895 Signal transducing histidine kinase, homodimeric domain IXK98_RS13180 PF01584 CheW-like domain IXK98_RS13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS13180 PF00072 Response regulator receiver domain IXK98_RS13180 PF01627 Hpt domain IXK98_RS13185 PF00072 Response regulator receiver domain IXK98_RS13185 PF01339 CheB methylesterase IXK98_RS13190 PF13614 AAA domain IXK98_RS13200 PF01584 CheW-like domain IXK98_RS13210 PF00005 ABC transporter IXK98_RS13215 PF03379 CcmB protein IXK98_RS13220 PF01578 Cytochrome C assembly protein IXK98_RS13225 PF04995 Heme exporter protein D (CcmD) IXK98_RS13230 PF03100 CcmE IXK98_RS13235 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal IXK98_RS13235 PF01578 Cytochrome C assembly protein IXK98_RS13240 PF08534 Redoxin IXK98_RS13245 PF03918 Cytochrome C biogenesis protein IXK98_RS13250 PF03918 Cytochrome C biogenesis protein IXK98_RS13255 PF04333 MlaA lipoprotein IXK98_RS13260 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IXK98_RS13275 PF04542 Sigma-70 region 2 IXK98_RS13275 PF08281 Sigma-70, region 4 IXK98_RS13280 PF00108 Thiolase, N-terminal domain IXK98_RS13280 PF02803 Thiolase, C-terminal domain IXK98_RS13285 PF00378 Enoyl-CoA hydratase/isomerase IXK98_RS13285 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain IXK98_RS13285 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain IXK98_RS13290 PF00881 Nitroreductase family IXK98_RS13295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS13295 PF03466 LysR substrate binding domain IXK98_RS13300 PF00072 Response regulator receiver domain IXK98_RS13305 PF04304 Protein of unknown function (DUF454) IXK98_RS13310 PF00156 Phosphoribosyl transferase domain IXK98_RS13315 PF12170 DNA polymerase III tau subunit V interacting with alpha IXK98_RS13315 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding IXK98_RS13315 PF12169 DNA polymerase III subunits gamma and tau domain III IXK98_RS13320 PF02575 YbaB/EbfC DNA-binding family IXK98_RS13325 PF02132 RecR protein IXK98_RS13325 PF13662 Toprim domain IXK98_RS13330 PF03692 Putative zinc- or iron-chelating domain IXK98_RS13350 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IXK98_RS13360 PF05947 Type VI secretion system, TssF IXK98_RS13380 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IXK98_RS13390 PF00004 ATPase family associated with various cellular activities (AAA) IXK98_RS13390 PF07724 AAA domain (Cdc48 subfamily) IXK98_RS13390 PF10431 C-terminal, D2-small domain, of ClpB protein IXK98_RS13390 PF17871 AAA lid domain IXK98_RS13395 PF02954 Bacterial regulatory protein, Fis family IXK98_RS13395 PF00158 Sigma-54 interaction domain IXK98_RS13410 PF14331 ImcF-related N-terminal domain IXK98_RS13410 PF06761 Intracellular multiplication and human macrophage-killing IXK98_RS13410 PF06744 Type VI secretion protein IcmF C-terminal IXK98_RS13420 PF03692 Putative zinc- or iron-chelating domain IXK98_RS13445 PF01757 Acyltransferase family IXK98_RS13460 PF00924 Mechanosensitive ion channel IXK98_RS13460 PF05552 Conserved TM helix IXK98_RS13470 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXK98_RS13480 PF02028 BCCT, betaine/carnitine/choline family transporter IXK98_RS13495 PF13847 Methyltransferase domain IXK98_RS13500 PF13426 PAS domain IXK98_RS13500 PF08447 PAS fold IXK98_RS13500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS13505 PF01263 Aldose 1-epimerase IXK98_RS13510 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IXK98_RS13510 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IXK98_RS13515 PF01641 SelR domain IXK98_RS13525 PF07023 Protein of unknown function (DUF1315) IXK98_RS13530 PF02810 SEC-C motif IXK98_RS13535 PF08668 HDOD domain IXK98_RS13535 PF00563 EAL domain IXK98_RS13540 PF00149 Calcineurin-like phosphoesterase IXK98_RS13545 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IXK98_RS13550 PF01406 tRNA synthetases class I (C) catalytic domain IXK98_RS13550 PF09190 DALR domain IXK98_RS13555 PF00265 Thymidine kinase IXK98_RS13560 PF01176 Translation initiation factor 1A / IF-1 IXK98_RS13565 PF04377 Arginine-tRNA-protein transferase, C terminus IXK98_RS13565 PF04376 Arginine-tRNA-protein transferase, N terminus IXK98_RS13570 PF03588 Leucyl/phenylalanyl-tRNA protein transferase IXK98_RS13580 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) IXK98_RS13585 PF10692 Protein of unknown function (DUF2498) IXK98_RS13590 PF01751 Toprim domain IXK98_RS13590 PF01131 DNA topoisomerase IXK98_RS13590 PF08272 Topoisomerase I zinc-ribbon-like IXK98_RS13590 PF01396 Topoisomerase DNA binding C4 zinc finger IXK98_RS13600 PF00483 Nucleotidyl transferase IXK98_RS13605 PF08323 Starch synthase catalytic domain IXK98_RS13605 PF00534 Glycosyl transferases group 1 IXK98_RS13625 PF04993 TfoX N-terminal domain IXK98_RS13625 PF04994 TfoX C-terminal domain IXK98_RS13630 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS13635 PF02613 Nitrate reductase delta subunit IXK98_RS13640 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS13640 PF00072 Response regulator receiver domain IXK98_RS13645 PF02698 DUF218 domain IXK98_RS13650 PF13847 Methyltransferase domain IXK98_RS13655 PF17193 MukF C-terminal domain IXK98_RS13655 PF03882 MukF winged-helix domain IXK98_RS13655 PF17192 MukF middle domain IXK98_RS13660 PF04288 MukE-like family IXK98_RS13665 PF04310 MukB N-terminal IXK98_RS13665 PF16330 MukB hinge domain IXK98_RS13670 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term IXK98_RS13670 PF12833 Helix-turn-helix domain IXK98_RS13675 PF00171 Aldehyde dehydrogenase family IXK98_RS13680 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS13680 PF00501 AMP-binding enzyme IXK98_RS13685 PF05199 GMC oxidoreductase IXK98_RS13685 PF00732 GMC oxidoreductase IXK98_RS13700 PF08443 RimK-like ATP-grasp domain IXK98_RS13700 PF18030 RimK PreATP-grasp domain IXK98_RS13705 PF08003 Protein of unknown function (DUF1698) IXK98_RS13710 PF13649 Methyltransferase domain IXK98_RS13715 PF01904 Protein of unknown function DUF72 IXK98_RS13720 PF02938 GAD domain IXK98_RS13720 PF00152 tRNA synthetases class II (D, K and N) IXK98_RS13720 PF01336 OB-fold nucleic acid binding domain IXK98_RS13725 PF00849 RNA pseudouridylate synthase IXK98_RS13730 PF03971 Monomeric isocitrate dehydrogenase IXK98_RS13735 PF00313 'Cold-shock' DNA-binding domain IXK98_RS13740 PF02617 ATP-dependent Clp protease adaptor protein ClpS IXK98_RS13745 PF10431 C-terminal, D2-small domain, of ClpB protein IXK98_RS13745 PF00004 ATPase family associated with various cellular activities (AAA) IXK98_RS13745 PF07724 AAA domain (Cdc48 subfamily) IXK98_RS13745 PF17871 AAA lid domain IXK98_RS13745 PF02861 Clp amino terminal domain, pathogenicity island component IXK98_RS13760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS13760 PF03466 LysR substrate binding domain IXK98_RS13780 PF01226 Formate/nitrite transporter IXK98_RS13790 PF03649 Uncharacterised protein family (UPF0014) IXK98_RS13795 PF06796 Periplasmic nitrate reductase protein NapE IXK98_RS13800 PF03264 NapC/NirT cytochrome c family, N-terminal region IXK98_RS13805 PF00384 Molybdopterin oxidoreductase IXK98_RS13805 PF18364 Molybdopterin oxidoreductase N-terminal domain IXK98_RS13805 PF01568 Molydopterin dinucleotide binding domain IXK98_RS13830 PF16874 Glycosyl hydrolase family 36 C-terminal domain IXK98_RS13830 PF16875 Glycosyl hydrolase family 36 N-terminal domain IXK98_RS13835 PF02075 Crossover junction endodeoxyribonuclease RuvC IXK98_RS13840 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS13840 PF00672 HAMP domain IXK98_RS13840 PF02203 Tar ligand binding domain homologue IXK98_RS13845 PF01330 RuvA N terminal domain IXK98_RS13845 PF07499 RuvA, C-terminal domain IXK98_RS13850 PF17864 RuvB AAA lid domain IXK98_RS13850 PF05496 Holliday junction DNA helicase RuvB P-loop domain IXK98_RS13850 PF05491 RuvB C-terminal winged helix domain IXK98_RS13855 PF01654 Cytochrome bd terminal oxidase subunit I IXK98_RS13860 PF02322 Cytochrome bd terminal oxidase subunit II IXK98_RS13865 PF08173 Membrane bound YbgT-like protein IXK98_RS13875 PF03061 Thioesterase superfamily IXK98_RS13880 PF01618 MotA/TolQ/ExbB proton channel family IXK98_RS13885 PF02472 Biopolymer transport protein ExbD/TolR IXK98_RS13895 PF04052 TolB amino-terminal domain IXK98_RS13895 PF07676 WD40-like Beta Propeller Repeat IXK98_RS13900 PF00691 OmpA family IXK98_RS13905 PF16331 TolA binding protein trimerisation IXK98_RS13905 PF13174 Tetratricopeptide repeat IXK98_RS13910 PF02445 Quinolinate synthetase A protein IXK98_RS13915 PF00764 Arginosuccinate synthase IXK98_RS13925 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS13925 PF00072 Response regulator receiver domain IXK98_RS13925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS13925 PF09308 LuxQ, periplasmic IXK98_RS13930 PF06610 L-alanine exporter IXK98_RS13950 PF01238 Phosphomannose isomerase type I IXK98_RS13955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IXK98_RS13955 PF02378 Phosphotransferase system, EIIC IXK98_RS13955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 IXK98_RS13960 PF12833 Helix-turn-helix domain IXK98_RS13970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit IXK98_RS13980 PF03479 Plants and Prokaryotes Conserved (PCC) domain IXK98_RS13980 PF12804 MobA-like NTP transferase domain IXK98_RS13980 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS13995 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS13995 PF00672 HAMP domain IXK98_RS14000 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS14000 PF00072 Response regulator receiver domain IXK98_RS14005 PF00535 Glycosyl transferase family 2 IXK98_RS14010 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase IXK98_RS14025 PF09317 Domain of unknown function (DUF1974) IXK98_RS14025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain IXK98_RS14025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain IXK98_RS14025 PF02770 Acyl-CoA dehydrogenase, middle domain IXK98_RS14030 PF12241 Trans-2-enoyl-CoA reductase catalytic region IXK98_RS14030 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase IXK98_RS14030 PF07055 Enoyl reductase FAD binding domain IXK98_RS14035 PF03372 Endonuclease/Exonuclease/phosphatase family IXK98_RS14040 PF00672 HAMP domain IXK98_RS14040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS14045 PF08007 Cupin superfamily protein IXK98_RS14050 PF10689 Protein of unknown function (DUF2496) IXK98_RS14055 PF07445 Primosomal replication protein priC IXK98_RS14060 PF01925 Sulfite exporter TauE/SafE IXK98_RS14065 PF06733 DEAD_2 IXK98_RS14065 PF13307 Helicase C-terminal domain IXK98_RS14070 PF13609 Gram-negative porin IXK98_RS14075 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) IXK98_RS14080 PF00202 Aminotransferase class-III IXK98_RS14085 PF04055 Radical SAM superfamily IXK98_RS14085 PF06968 Biotin and Thiamin Synthesis associated domain IXK98_RS14090 PF00155 Aminotransferase class I and II IXK98_RS14095 PF08241 Methyltransferase domain IXK98_RS14110 PF01435 Peptidase family M48 IXK98_RS14120 PF00106 short chain dehydrogenase IXK98_RS14145 PF16036 Chalcone isomerase-like IXK98_RS14155 PF00206 Lyase IXK98_RS14155 PF08328 Adenylosuccinate lyase C-terminal IXK98_RS14160 PF04356 Protein of unknown function (DUF489) IXK98_RS14175 PF00294 pfkB family carbohydrate kinase IXK98_RS14180 PF00816 H-NS histone family IXK98_RS14185 PF03553 Na+/H+ antiporter family IXK98_RS14190 PF08029 HisG, C-terminal domain IXK98_RS14190 PF01634 ATP phosphoribosyltransferase IXK98_RS14195 PF00815 Histidinol dehydrogenase IXK98_RS14200 PF00155 Aminotransferase class I and II IXK98_RS14205 PF00475 Imidazoleglycerol-phosphate dehydratase IXK98_RS14205 PF08645 Polynucleotide kinase 3 phosphatase IXK98_RS14210 PF00117 Glutamine amidotransferase class-I IXK98_RS14215 PF00977 Histidine biosynthesis protein IXK98_RS14220 PF00977 Histidine biosynthesis protein IXK98_RS14225 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase IXK98_RS14225 PF01502 Phosphoribosyl-AMP cyclohydrolase IXK98_RS14235 PF01368 DHH family IXK98_RS14235 PF02833 DHHA2 domain IXK98_RS14250 PF00005 ABC transporter IXK98_RS14255 PF00005 ABC transporter IXK98_RS14255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS14260 PF12911 N-terminal TM domain of oligopeptide transport permease C IXK98_RS14260 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS14265 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS14270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS14275 PF02954 Bacterial regulatory protein, Fis family IXK98_RS14275 PF00158 Sigma-54 interaction domain IXK98_RS14280 PF04012 PspA/IM30 family IXK98_RS14285 PF06667 Phage shock protein B IXK98_RS14300 PF13533 Biotin-lipoyl like IXK98_RS14305 PF00873 AcrB/AcrD/AcrF family IXK98_RS14310 PF13302 Acetyltransferase (GNAT) domain IXK98_RS14310 PF03352 Methyladenine glycosylase IXK98_RS14310 PF00117 Glutamine amidotransferase class-I IXK98_RS14310 PF13673 Acetyltransferase (GNAT) domain IXK98_RS14310 PF00958 GMP synthase C terminal domain IXK98_RS14315 PF03280 Proteobacterial lipase chaperone protein IXK98_RS14320 PF00561 alpha/beta hydrolase fold IXK98_RS14325 PF01053 Cys/Met metabolism PLP-dependent enzyme IXK98_RS14330 PF13396 Phospholipase_D-nuclease N-terminal IXK98_RS14330 PF13091 PLD-like domain IXK98_RS14335 PF00209 Sodium:neurotransmitter symporter family IXK98_RS14340 PF00672 HAMP domain IXK98_RS14340 PF12729 Four helix bundle sensory module for signal transduction IXK98_RS14340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS14345 PF00849 RNA pseudouridylate synthase IXK98_RS14350 PF17785 PUA-like domain IXK98_RS14350 PF10672 S-adenosylmethionine-dependent methyltransferase IXK98_RS14370 PF13629 Pilus formation protein N terminal region IXK98_RS14370 PF00263 Bacterial type II and III secretion system protein IXK98_RS14370 PF04972 BON domain IXK98_RS14385 PF00437 Type II/IV secretion system protein IXK98_RS14425 PF01066 CDP-alcohol phosphatidyltransferase IXK98_RS14430 PF00005 ABC transporter IXK98_RS14435 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS14440 PF13416 Bacterial extracellular solute-binding protein IXK98_RS14450 PF06945 Protein of unknown function (DUF1289) IXK98_RS14480 PF03795 YCII-related domain IXK98_RS14485 PF03061 Thioesterase superfamily IXK98_RS14490 PF04279 Intracellular septation protein A IXK98_RS14500 PF00072 Response regulator receiver domain IXK98_RS14500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS14505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS14505 PF00072 Response regulator receiver domain IXK98_RS14510 PF17327 Acyl homoserine lactone synthase IXK98_RS14515 PF00216 Bacterial DNA-binding protein IXK98_RS14520 PF04269 Protein of unknown function, DUF440 IXK98_RS14525 PF09285 Elongation factor P, C-terminal IXK98_RS14525 PF08207 Elongation factor P (EF-P) KOW-like domain IXK98_RS14525 PF01132 Elongation factor P (EF-P) OB domain IXK98_RS14535 PF00136 DNA polymerase family B IXK98_RS14535 PF03104 DNA polymerase family B, exonuclease domain IXK98_RS14540 PF00072 Response regulator receiver domain IXK98_RS14540 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS14545 PF02151 UvrB/uvrC motif IXK98_RS14545 PF01541 GIY-YIG catalytic domain IXK98_RS14545 PF08459 UvrC Helix-hairpin-helix N-terminal IXK98_RS14550 PF01066 CDP-alcohol phosphatidyltransferase IXK98_RS14575 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS14575 PF17158 Membrane-associated sensor, integral membrane domain IXK98_RS14580 PF07995 Glucose / Sorbosone dehydrogenase IXK98_RS14610 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS14610 PF00072 Response regulator receiver domain IXK98_RS14615 PF03466 LysR substrate binding domain IXK98_RS14615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS14620 PF00583 Acetyltransferase (GNAT) family IXK98_RS14625 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain IXK98_RS14625 PF01409 tRNA synthetases class II core domain (F) IXK98_RS14630 PF01588 Putative tRNA binding domain IXK98_RS14630 PF03484 tRNA synthetase B5 domain IXK98_RS14630 PF03147 Ferredoxin-fold anticodon binding domain IXK98_RS14630 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IXK98_RS14630 PF03483 B3/4 domain IXK98_RS14640 PF00474 Sodium:solute symporter family IXK98_RS14650 PF06178 Oligogalacturonate-specific porin protein (KdgM) IXK98_RS14655 PF07733 Bacterial DNA polymerase III alpha NTPase domain IXK98_RS14655 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IXK98_RS14655 PF14579 Helix-hairpin-helix motif IXK98_RS14655 PF11490 DNA polymerase III polC-type N-terminus II IXK98_RS14655 PF00929 Exonuclease IXK98_RS14655 PF02811 PHP domain IXK98_RS14660 PF00571 CBS domain IXK98_RS14665 PF07729 FCD domain IXK98_RS14665 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS14670 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS14670 PF07729 FCD domain IXK98_RS14685 PF07940 Heparinase II/III-like protein IXK98_RS14685 PF05426 Alginate lyase IXK98_RS14690 PF07940 Heparinase II/III-like protein IXK98_RS14690 PF05426 Alginate lyase IXK98_RS14695 PF07883 Cupin domain IXK98_RS14700 PF00294 pfkB family carbohydrate kinase IXK98_RS14705 PF01081 KDPG and KHG aldolase IXK98_RS14710 PF00474 Sodium:solute symporter family IXK98_RS14715 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain IXK98_RS14715 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase IXK98_RS14725 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain IXK98_RS14725 PF01588 Putative tRNA binding domain IXK98_RS14725 PF03147 Ferredoxin-fold anticodon binding domain IXK98_RS14725 PF03484 tRNA synthetase B5 domain IXK98_RS14725 PF03483 B3/4 domain IXK98_RS14730 PF02653 Branched-chain amino acid transport system / permease component IXK98_RS14735 PF02653 Branched-chain amino acid transport system / permease component IXK98_RS14740 PF00005 ABC transporter IXK98_RS14750 PF04198 Putative sugar-binding domain IXK98_RS14755 PF00248 Aldo/keto reductase family IXK98_RS14760 PF01266 FAD dependent oxidoreductase IXK98_RS14760 PF16901 C-terminal domain of alpha-glycerophosphate oxidase IXK98_RS14765 PF01791 DeoC/LacD family aldolase IXK98_RS14770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain IXK98_RS14770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain IXK98_RS14775 PF00465 Iron-containing alcohol dehydrogenase IXK98_RS14780 PF00171 Aldehyde dehydrogenase family IXK98_RS14785 PF03422 Carbohydrate binding module (family 6) IXK98_RS14785 PF02412 Thrombospondin type 3 repeat IXK98_RS14790 PF09339 IclR helix-turn-helix domain IXK98_RS14790 PF01614 Bacterial transcriptional regulator IXK98_RS14795 PF09339 IclR helix-turn-helix domain IXK98_RS14795 PF01614 Bacterial transcriptional regulator IXK98_RS14800 PF08450 SMP-30/Gluconolactonase/LRE-like region IXK98_RS14810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS14810 PF03466 LysR substrate binding domain IXK98_RS14815 PF17954 Quercetinase C-terminal cupin domain IXK98_RS14815 PF02678 Pirin IXK98_RS14825 PF00367 phosphotransferase system, EIIB IXK98_RS14825 PF02378 Phosphotransferase system, EIIC IXK98_RS14830 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS14835 PF08244 Glycosyl hydrolases family 32 C terminal IXK98_RS14835 PF00251 Glycosyl hydrolases family 32 N-terminal domain IXK98_RS14840 PF00294 pfkB family carbohydrate kinase IXK98_RS14845 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family IXK98_RS14845 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS14855 PF01554 MatE IXK98_RS14860 PF03466 LysR substrate binding domain IXK98_RS14860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS14865 PF03577 Peptidase family C69 IXK98_RS14870 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family IXK98_RS14870 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain IXK98_RS14880 PF00857 Isochorismatase family IXK98_RS14895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXK98_RS14900 PF09334 tRNA synthetases class I (M) IXK98_RS14900 PF01588 Putative tRNA binding domain IXK98_RS14940 PF01817 Chorismate mutase type II IXK98_RS14945 PF08274 PhnA Zinc-Ribbon IXK98_RS14945 PF03831 PhnA domain IXK98_RS14950 PF13411 MerR HTH family regulatory protein IXK98_RS14955 PF02627 Carboxymuconolactone decarboxylase family IXK98_RS14970 PF01810 LysE type translocator IXK98_RS15020 PF00583 Acetyltransferase (GNAT) family IXK98_RS15050 PF07669 Eco57I restriction-modification methylase IXK98_RS15100 PF00239 Resolvase, N terminal domain IXK98_RS15100 PF02796 Helix-turn-helix domain of resolvase IXK98_RS15105 PF00239 Resolvase, N terminal domain IXK98_RS15105 PF13408 Recombinase zinc beta ribbon domain IXK98_RS15105 PF07508 Recombinase IXK98_RS15110 PF02074 Carboxypeptidase Taq (M32) metallopeptidase IXK98_RS15115 PF01810 LysE type translocator IXK98_RS15130 PF01235 Sodium:alanine symporter family IXK98_RS15155 PF00563 EAL domain IXK98_RS15155 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS15155 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS15160 PF07687 Peptidase dimerisation domain IXK98_RS15160 PF01546 Peptidase family M20/M25/M40 IXK98_RS15165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXK98_RS15170 PF04209 homogentisate 1,2-dioxygenase IXK98_RS15180 PF14497 Glutathione S-transferase, C-terminal domain IXK98_RS15180 PF02798 Glutathione S-transferase, N-terminal domain IXK98_RS15200 PF00691 OmpA family IXK98_RS15200 PF13488 Glycine zipper IXK98_RS15215 PF01565 FAD binding domain IXK98_RS15215 PF02913 FAD linked oxidases, C-terminal domain IXK98_RS15215 PF13183 4Fe-4S dicluster domain IXK98_RS15220 PF04191 Phospholipid methyltransferase IXK98_RS15230 PF17391 Urocanase N-terminal domain IXK98_RS15230 PF17392 Urocanase C-terminal domain IXK98_RS15230 PF01175 Urocanase Rossmann-like domain IXK98_RS15235 PF00221 Aromatic amino acid lyase IXK98_RS15240 PF00491 Arginase family IXK98_RS15245 PF01979 Amidohydrolase family IXK98_RS15250 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS15250 PF07702 UTRA domain IXK98_RS15255 PF07070 SpoOM protein IXK98_RS15270 PF05724 Thiopurine S-methyltransferase (TPMT) IXK98_RS15275 PF02222 ATP-grasp domain IXK98_RS15280 PF11871 Domain of unknown function (DUF3391) IXK98_RS15280 PF01966 HD domain IXK98_RS15285 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region IXK98_RS15285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IXK98_RS15290 PF04172 LrgB-like family IXK98_RS15295 PF03788 LrgA family IXK98_RS15300 PF00929 Exonuclease IXK98_RS15300 PF08411 Exonuclease C-terminal IXK98_RS15335 PF00375 Sodium:dicarboxylate symporter family IXK98_RS15340 PF13460 NAD(P)H-binding IXK98_RS15345 PF01613 Flavin reductase like domain IXK98_RS15350 PF02277 Phosphoribosyltransferase IXK98_RS15355 PF02654 Cobalamin-5-phosphate synthase IXK98_RS15360 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase IXK98_RS15375 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family IXK98_RS15380 PF01032 FecCD transport family IXK98_RS15385 PF00005 ABC transporter IXK98_RS15395 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS15410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS15410 PF03466 LysR substrate binding domain IXK98_RS15415 PF00005 ABC transporter IXK98_RS15430 PF01863 Protein of unknown function DUF45 IXK98_RS15435 PF05971 RNA methyltransferase IXK98_RS15445 PF00561 alpha/beta hydrolase fold IXK98_RS15450 PF04204 Homoserine O-succinyltransferase IXK98_RS15470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS15470 PF08447 PAS fold IXK98_RS15470 PF13426 PAS domain IXK98_RS15480 PF01914 MarC family integral membrane protein IXK98_RS15495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS15505 PF13673 Acetyltransferase (GNAT) domain IXK98_RS15510 PF01970 Tripartite tricarboxylate transporter TctA family IXK98_RS15545 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IXK98_RS15575 PF00004 ATPase family associated with various cellular activities (AAA) IXK98_RS15575 PF07724 AAA domain (Cdc48 subfamily) IXK98_RS15575 PF17871 AAA lid domain IXK98_RS15575 PF10431 C-terminal, D2-small domain, of ClpB protein IXK98_RS15600 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IXK98_RS15630 PF06715 Gp5 C-terminal repeat (3 copies) IXK98_RS15630 PF04717 Type VI secretion system, phage-baseplate injector IXK98_RS15635 PF02225 PA domain IXK98_RS15635 PF04389 Peptidase family M28 IXK98_RS15655 PF00285 Citrate synthase, C-terminal domain IXK98_RS15660 PF00330 Aconitase family (aconitate hydratase) IXK98_RS15660 PF00694 Aconitase C-terminal domain IXK98_RS15665 PF04303 PrpF protein IXK98_RS15670 PF16177 Acetyl-coenzyme A synthetase N-terminus IXK98_RS15670 PF00501 AMP-binding enzyme IXK98_RS15670 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS15685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS15685 PF00672 HAMP domain IXK98_RS15685 PF02743 Cache domain IXK98_RS15695 PF04055 Radical SAM superfamily IXK98_RS15700 PF06508 Queuosine biosynthesis protein QueC IXK98_RS15705 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS15705 PF17158 Membrane-associated sensor, integral membrane domain IXK98_RS15715 PF05736 OprF membrane domain IXK98_RS15715 PF00691 OmpA family IXK98_RS15730 PF17785 PUA-like domain IXK98_RS15730 PF10672 S-adenosylmethionine-dependent methyltransferase IXK98_RS15735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS15735 PF00672 HAMP domain IXK98_RS15735 PF02743 Cache domain IXK98_RS15740 PF00708 Acylphosphatase IXK98_RS15745 PF04358 DsrC like protein IXK98_RS15750 PF01027 Inhibitor of apoptosis-promoting Bax1 IXK98_RS15755 PF00005 ABC transporter IXK98_RS15760 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS15765 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS15770 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS15775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXK98_RS15775 PF14824 Sirohaem biosynthesis protein central IXK98_RS15775 PF10414 Sirohaem synthase dimerisation region IXK98_RS15780 PF04461 Protein of unknown function (DUF520) IXK98_RS15785 PF00793 DAHP synthetase I family IXK98_RS15805 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF IXK98_RS15805 PF01189 16S rRNA methyltransferase RsmB/F IXK98_RS15805 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF IXK98_RS15810 PF02470 MlaD protein IXK98_RS15815 PF04403 Paraquat-inducible protein A IXK98_RS15820 PF00664 ABC transporter transmembrane region IXK98_RS15820 PF00005 ABC transporter IXK98_RS15825 PF13185 GAF domain IXK98_RS15830 PF17516 ProQ C-terminal domain IXK98_RS15830 PF04352 ProQ/FINO family IXK98_RS15835 PF03572 Peptidase family S41 IXK98_RS15835 PF11818 C-terminal domain of tail specific protease (DUF3340) IXK98_RS15835 PF00595 PDZ domain IXK98_RS15835 PF17804 Tail specific protease N-terminal domain IXK98_RS15845 PF01433 Peptidase family M1 domain IXK98_RS15845 PF11940 Domain of unknown function (DUF3458) Ig-like fold IXK98_RS15845 PF17432 Domain of unknown function (DUF3458_C) ARM repeats IXK98_RS15855 PF05088 Bacterial NAD-glutamate dehydrogenase IXK98_RS15860 PF01180 Dihydroorotate dehydrogenase IXK98_RS15865 PF07126 Cell-division protein ZapC IXK98_RS15870 PF10672 S-adenosylmethionine-dependent methyltransferase IXK98_RS15870 PF02926 THUMP domain IXK98_RS15870 PF01170 Putative RNA methylase family UPF0020 IXK98_RS15880 PF16326 ABC transporter C-terminal domain IXK98_RS15880 PF00005 ABC transporter IXK98_RS15880 PF12848 ABC transporter IXK98_RS15890 PF04957 Ribosome modulation factor IXK98_RS15895 PF07977 FabA-like domain IXK98_RS15900 PF13654 AAA domain IXK98_RS15900 PF05362 Lon protease (S16) C-terminal proteolytic domain IXK98_RS15905 PF06303 MatP N-terminal domain IXK98_RS15905 PF17414 MatP C-terminal ribbon-helix-helix domain IXK98_RS15925 PF01810 LysE type translocator IXK98_RS15930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IXK98_RS15930 PF02272 DHHA1 domain IXK98_RS15930 PF01411 tRNA synthetases class II (A) IXK98_RS15935 PF08241 Methyltransferase domain IXK98_RS16100 PF00115 Cytochrome C and Quinol oxidase polypeptide I IXK98_RS16115 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IXK98_RS16115 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP IXK98_RS16125 PF00403 Heavy-metal-associated domain IXK98_RS16140 PF13545 Crp-like helix-turn-helix domain IXK98_RS16140 PF00027 Cyclic nucleotide-binding domain IXK98_RS16145 PF00582 Universal stress protein family IXK98_RS16150 PF01171 PP-loop family IXK98_RS16155 PF01554 MatE IXK98_RS16175 PF00005 ABC transporter IXK98_RS16175 PF08402 TOBE domain IXK98_RS16180 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS16185 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS16190 PF13416 Bacterial extracellular solute-binding protein IXK98_RS16195 PF13416 Bacterial extracellular solute-binding protein IXK98_RS16200 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS16200 PF17152 Periplasmic sensor domain IXK98_RS16205 PF02146 Sir2 family IXK98_RS16210 PF00909 Ammonium Transporter Family IXK98_RS16225 PF13247 4Fe-4S dicluster domain IXK98_RS16230 PF01568 Molydopterin dinucleotide binding domain IXK98_RS16230 PF00384 Molybdopterin oxidoreductase IXK98_RS16230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain IXK98_RS16260 PF02634 FdhD/NarQ family IXK98_RS16265 PF00672 HAMP domain IXK98_RS16265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS16265 PF02743 Cache domain IXK98_RS16270 PF08212 Lipocalin-like domain IXK98_RS16305 PF05016 ParE toxin of type II toxin-antitoxin system, parDE IXK98_RS16330 PF13333 Integrase core domain IXK98_RS16330 PF00665 Integrase core domain IXK98_RS16330 PF13276 HTH-like domain IXK98_RS16345 PF01872 RibD C-terminal domain IXK98_RS16345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IXK98_RS16390 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IXK98_RS16390 PF01872 RibD C-terminal domain IXK98_RS16470 PF01588 Putative tRNA binding domain IXK98_RS16470 PF08264 Anticodon-binding domain of tRNA IXK98_RS16470 PF09334 tRNA synthetases class I (M) IXK98_RS16510 PF12848 ABC transporter IXK98_RS16510 PF00005 ABC transporter IXK98_RS16525 PF00158 Sigma-54 interaction domain IXK98_RS16525 PF02954 Bacterial regulatory protein, Fis family IXK98_RS16525 PF00072 Response regulator receiver domain IXK98_RS16530 PF12849 PBP superfamily domain IXK98_RS16535 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS16540 PF08402 TOBE domain IXK98_RS16540 PF00005 ABC transporter IXK98_RS16545 PF12804 MobA-like NTP transferase domain IXK98_RS16550 PF03453 MoeA N-terminal region (domain I and II) IXK98_RS16550 PF00994 Probable molybdopterin binding domain IXK98_RS16550 PF03454 MoeA C-terminal region (domain IV) IXK98_RS16560 PF00480 ROK family IXK98_RS16565 PF03942 DTW domain IXK98_RS16575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS16575 PF12729 Four helix bundle sensory module for signal transduction IXK98_RS16575 PF00672 HAMP domain IXK98_RS16580 PF00877 NlpC/P60 family IXK98_RS16590 PF03881 Fructosamine kinase IXK98_RS16600 PF00677 Lumazine binding domain IXK98_RS16605 PF01554 MatE IXK98_RS16615 PF01740 STAS domain IXK98_RS16620 PF01389 OmpA-like transmembrane domain IXK98_RS16620 PF00691 OmpA family IXK98_RS16640 PF17149 Periplasmic sensor domain found in signal transduction proteins IXK98_RS16640 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS16640 PF01627 Hpt domain IXK98_RS16640 PF00072 Response regulator receiver domain IXK98_RS16640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS16640 PF00672 HAMP domain IXK98_RS16645 PF00158 Sigma-54 interaction domain IXK98_RS16645 PF02954 Bacterial regulatory protein, Fis family IXK98_RS16645 PF00072 Response regulator receiver domain IXK98_RS16655 PF00534 Glycosyl transferases group 1 IXK98_RS16655 PF13439 Glycosyltransferase Family 4 IXK98_RS16690 PF13579 Glycosyl transferase 4-like domain IXK98_RS16690 PF00534 Glycosyl transferases group 1 IXK98_RS16700 PF02397 Bacterial sugar transferase IXK98_RS16715 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS16715 PF07689 KaiB domain IXK98_RS16715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS16720 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS16720 PF00072 Response regulator receiver domain IXK98_RS16740 PF01212 Beta-eliminating lyase IXK98_RS16750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS16750 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS16750 PF00072 Response regulator receiver domain IXK98_RS16750 PF09456 RcsC Alpha-Beta-Loop (ABL) IXK98_RS16755 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS16755 PF00072 Response regulator receiver domain IXK98_RS16760 PF03222 Tryptophan/tyrosine permease family IXK98_RS16765 PF02195 ParB-like nuclease domain IXK98_RS16770 PF11922 Domain of unknown function (DUF3440) IXK98_RS16770 PF01507 Phosphoadenosine phosphosulfate reductase family IXK98_RS16805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXK98_RS16805 PF10414 Sirohaem synthase dimerisation region IXK98_RS16805 PF14824 Sirohaem biosynthesis protein central IXK98_RS16810 PF01226 Formate/nitrite transporter IXK98_RS16815 PF13806 Rieske-like [2Fe-2S] domain IXK98_RS16820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain IXK98_RS16820 PF18267 Rubredoxin NAD+ reductase C-terminal domain IXK98_RS16820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain IXK98_RS16820 PF04324 BFD-like [2Fe-2S] binding domain IXK98_RS16820 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS16825 PF16591 Helical bimodular sensor domain IXK98_RS16825 PF00672 HAMP domain IXK98_RS16825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS16840 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS16840 PF17151 Periplasmic sensor domain IXK98_RS16860 PF12431 Transcriptional regulator IXK98_RS16860 PF00072 Response regulator receiver domain IXK98_RS16865 PF00989 PAS fold IXK98_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS16865 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain IXK98_RS16865 PF17203 Single cache domain 3 IXK98_RS16880 PF03544 Gram-negative bacterial TonB protein C-terminal IXK98_RS16885 PF02472 Biopolymer transport protein ExbD/TolR IXK98_RS16890 PF01618 MotA/TolQ/ExbB proton channel family IXK98_RS16895 PF01618 MotA/TolQ/ExbB proton channel family IXK98_RS16905 PF07715 TonB-dependent Receptor Plug Domain IXK98_RS16905 PF00593 TonB dependent receptor IXK98_RS16910 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS16910 PF00672 HAMP domain IXK98_RS16910 PF16750 Sensor domain of 2-component histidine kinase IXK98_RS16910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS16915 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS16915 PF00072 Response regulator receiver domain IXK98_RS16925 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IXK98_RS16925 PF00056 lactate/malate dehydrogenase, NAD binding domain IXK98_RS16935 PF03009 Glycerophosphoryl diester phosphodiesterase family IXK98_RS16945 PF01259 SAICAR synthetase IXK98_RS16965 PF03466 LysR substrate binding domain IXK98_RS16965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS16970 PF04055 Radical SAM superfamily IXK98_RS16975 PF11230 Protein of unknown function (DUF3029) IXK98_RS16980 PF17200 Single Cache domain 2 IXK98_RS16980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS16980 PF00672 HAMP domain IXK98_RS16990 PF00521 DNA gyrase/topoisomerase IV, subunit A IXK98_RS16990 PF03989 DNA gyrase C-terminal domain, beta-propeller IXK98_RS17000 PF03477 ATP cone domain IXK98_RS17000 PF00317 Ribonucleotide reductase, all-alpha domain IXK98_RS17000 PF02867 Ribonucleotide reductase, barrel domain IXK98_RS17005 PF00268 Ribonucleotide reductase, small chain IXK98_RS17020 PF00994 Probable molybdopterin binding domain IXK98_RS17035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IXK98_RS17040 PF03435 Saccharopine dehydrogenase NADP binding domain IXK98_RS17040 PF16653 Saccharopine dehydrogenase C-terminal domain IXK98_RS17045 PF00202 Aminotransferase class-III IXK98_RS17060 PF02412 Thrombospondin type 3 repeat IXK98_RS17060 PF03422 Carbohydrate binding module (family 6) IXK98_RS17065 PF06965 Na+/H+ antiporter 1 IXK98_RS17075 PF12704 MacB-like periplasmic core domain IXK98_RS17075 PF02687 FtsX-like permease family IXK98_RS17080 PF00005 ABC transporter IXK98_RS17085 PF01554 MatE IXK98_RS17090 PF11066 Protein of unknown function (DUF2867) IXK98_RS17090 PF13460 NAD(P)H-binding IXK98_RS17100 PF07690 Major Facilitator Superfamily IXK98_RS17105 PF01479 S4 domain IXK98_RS17105 PF00849 RNA pseudouridylate synthase IXK98_RS17110 PF04851 Type III restriction enzyme, res subunit IXK98_RS17110 PF00271 Helicase conserved C-terminal domain IXK98_RS17120 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS17120 PF00072 Response regulator receiver domain IXK98_RS17125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS17140 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS17140 PF18500 CadC C-terminal domain 1 IXK98_RS17145 PF00873 AcrB/AcrD/AcrF family IXK98_RS17150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS17195 PF04717 Type VI secretion system, phage-baseplate injector IXK98_RS17195 PF16671 Actin cross-linking domain IXK98_RS17205 PF00535 Glycosyl transferase family 2 IXK98_RS17210 PF01386 Ribosomal L25p family IXK98_RS17215 PF01040 UbiA prenyltransferase family IXK98_RS17225 PF00510 Cytochrome c oxidase subunit III IXK98_RS17230 PF00115 Cytochrome C and Quinol oxidase polypeptide I IXK98_RS17235 PF00116 Cytochrome C oxidase subunit II, periplasmic domain IXK98_RS17235 PF06481 COX Aromatic Rich Motif IXK98_RS17250 PF03466 LysR substrate binding domain IXK98_RS17250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS17255 PF17848 Acetyl-coA carboxylase zinc finger domain IXK98_RS17255 PF01039 Carboxyl transferase domain IXK98_RS17260 PF02696 Uncharacterized ACR, YdiU/UPF0061 family IXK98_RS17270 PF07683 Cobalamin synthesis protein cobW C-terminal domain IXK98_RS17270 PF02492 CobW/HypB/UreG, nucleotide-binding domain IXK98_RS17280 PF00268 Ribonucleotide reductase, small chain IXK98_RS17285 PF02867 Ribonucleotide reductase, barrel domain IXK98_RS17285 PF08343 Ribonucleotide reductase N-terminal IXK98_RS17285 PF00317 Ribonucleotide reductase, all-alpha domain IXK98_RS17290 PF07972 NrdI Flavodoxin like IXK98_RS17295 PF00462 Glutaredoxin IXK98_RS17300 PF01521 Iron-sulphur cluster biosynthesis IXK98_RS17305 PF01458 Uncharacterized protein family (UPF0051) IXK98_RS17310 PF00005 ABC transporter IXK98_RS17315 PF01458 Uncharacterized protein family (UPF0051) IXK98_RS17320 PF00266 Aminotransferase class-V IXK98_RS17325 PF02657 Fe-S metabolism associated domain IXK98_RS17330 PF00127 Copper binding proteins, plastocyanin/azurin family IXK98_RS17335 PF02743 Cache domain IXK98_RS17335 PF00672 HAMP domain IXK98_RS17335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS17340 PF00282 Pyridoxal-dependent decarboxylase conserved domain IXK98_RS17350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXK98_RS17360 PF14602 Hexapeptide repeat of succinyl-transferase IXK98_RS17360 PF12464 Maltose acetyltransferase IXK98_RS17365 PF03150 Di-haem cytochrome c peroxidase IXK98_RS17365 PF00034 Cytochrome c IXK98_RS17365 PF14376 Haem-binding domain IXK98_RS17370 PF00072 Response regulator receiver domain IXK98_RS17370 PF09308 LuxQ, periplasmic IXK98_RS17370 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS17370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS17395 PF04717 Type VI secretion system, phage-baseplate injector IXK98_RS17405 PF00892 EamA-like transporter family IXK98_RS17410 PF13520 Amino acid permease IXK98_RS17420 PF01734 Patatin-like phospholipase IXK98_RS17435 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS17435 PF00072 Response regulator receiver domain IXK98_RS17440 PF07730 Histidine kinase IXK98_RS17440 PF17200 Single Cache domain 2 IXK98_RS17445 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IXK98_RS17455 PF03480 Bacterial extracellular solute-binding protein, family 7 IXK98_RS17470 PF00753 Metallo-beta-lactamase superfamily IXK98_RS17475 PF05951 Bacterial protein of unknown function (DUF882) IXK98_RS17480 PF03734 L,D-transpeptidase catalytic domain IXK98_RS17480 PF01471 Putative peptidoglycan binding domain IXK98_RS17505 PF00925 GTP cyclohydrolase II IXK98_RS17515 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS17530 PF13302 Acetyltransferase (GNAT) domain IXK98_RS17535 PF00158 Sigma-54 interaction domain IXK98_RS17535 PF18024 Helix-turn-helix domain IXK98_RS17540 PF05128 Domain of unknown function (DUF697) IXK98_RS17545 PF04317 YcjX-like family, DUF463 IXK98_RS17560 PF04715 Anthranilate synthase component I, N terminal region IXK98_RS17560 PF00425 chorismate binding enzyme IXK98_RS17565 PF00072 Response regulator receiver domain IXK98_RS17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS17565 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS17565 PF09308 LuxQ, periplasmic IXK98_RS17575 PF00293 NUDIX domain IXK98_RS17580 PF03222 Tryptophan/tyrosine permease family IXK98_RS17585 PF03313 Serine dehydratase alpha chain IXK98_RS17585 PF03315 Serine dehydratase beta chain IXK98_RS17595 PF04231 Endonuclease I IXK98_RS17600 PF03222 Tryptophan/tyrosine permease family IXK98_RS17610 PF01740 STAS domain IXK98_RS17610 PF00916 Sulfate permease family IXK98_RS17620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS17620 PF12729 Four helix bundle sensory module for signal transduction IXK98_RS17620 PF00672 HAMP domain IXK98_RS17625 PF00152 tRNA synthetases class II (D, K and N) IXK98_RS17625 PF01336 OB-fold nucleic acid binding domain IXK98_RS17640 PF00155 Aminotransferase class I and II IXK98_RS17640 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS17650 PF01966 HD domain IXK98_RS17650 PF00672 HAMP domain IXK98_RS17655 PF00155 Aminotransferase class I and II IXK98_RS17675 PF11898 Domain of unknown function (DUF3418) IXK98_RS17675 PF00270 DEAD/DEAH box helicase IXK98_RS17675 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IXK98_RS17675 PF00271 Helicase conserved C-terminal domain IXK98_RS17675 PF04408 Helicase associated domain (HA2) IXK98_RS17680 PF00390 Malic enzyme, N-terminal domain IXK98_RS17680 PF03949 Malic enzyme, NAD binding domain IXK98_RS17690 PF02698 DUF218 domain IXK98_RS17695 PF07694 5TMR of 5TMR-LYT IXK98_RS17695 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS17705 PF00266 Aminotransferase class-V IXK98_RS17715 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS17720 PF00664 ABC transporter transmembrane region IXK98_RS17720 PF00005 ABC transporter IXK98_RS17725 PF00005 ABC transporter IXK98_RS17725 PF00664 ABC transporter transmembrane region IXK98_RS17730 PF00563 EAL domain IXK98_RS17730 PF01590 GAF domain IXK98_RS17730 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS17730 PF00360 Phytochrome region IXK98_RS17740 PF01479 S4 domain IXK98_RS17740 PF00849 RNA pseudouridylate synthase IXK98_RS17745 PF01300 Telomere recombination IXK98_RS17750 PF02811 PHP domain IXK98_RS17755 PF08056 Tryptophan operon leader peptide IXK98_RS17760 PF04715 Anthranilate synthase component I, N terminal region IXK98_RS17760 PF00425 chorismate binding enzyme IXK98_RS17765 PF00117 Glutamine amidotransferase class-I IXK98_RS17770 PF00591 Glycosyl transferase family, a/b domain IXK98_RS17770 PF02885 Glycosyl transferase family, helical bundle domain IXK98_RS17775 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase IXK98_RS17775 PF00218 Indole-3-glycerol phosphate synthase IXK98_RS17780 PF00291 Pyridoxal-phosphate dependent enzyme IXK98_RS17785 PF00290 Tryptophan synthase alpha chain IXK98_RS17790 PF00375 Sodium:dicarboxylate symporter family IXK98_RS17800 PF00005 ABC transporter IXK98_RS17800 PF00664 ABC transporter transmembrane region IXK98_RS17810 PF04408 Helicase associated domain (HA2) IXK98_RS17810 PF00270 DEAD/DEAH box helicase IXK98_RS17810 PF11898 Domain of unknown function (DUF3418) IXK98_RS17810 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold IXK98_RS17810 PF00271 Helicase conserved C-terminal domain IXK98_RS17840 PF08448 PAS fold IXK98_RS17840 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS17850 PF00012 Hsp70 protein IXK98_RS17855 PF00012 Hsp70 protein IXK98_RS17860 PF03496 ADP-ribosyltransferase exoenzyme IXK98_RS17860 PF03545 Yersinia virulence determinant (YopE) IXK98_RS17880 PF07720 Tetratricopeptide repeat IXK98_RS17885 PF04792 V antigen (LcrV) protein IXK98_RS17900 PF00771 FHIPEP family IXK98_RS17920 PF09059 TyeA IXK98_RS17925 PF07201 HrpJ-like domain IXK98_RS17930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXK98_RS17930 PF02874 ATP synthase alpha/beta family, beta-barrel domain IXK98_RS17930 PF18269 T3SS EscN ATPase C-terminal domain IXK98_RS17945 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term IXK98_RS17950 PF00813 FliP family IXK98_RS17955 PF01313 Bacterial export proteins, family 3 IXK98_RS17960 PF01311 Bacterial export proteins, family 1 IXK98_RS17965 PF01312 FlhB HrpN YscU SpaS Family IXK98_RS17990 PF02108 Flagellar assembly protein FliH IXK98_RS18000 PF01514 Secretory protein of YscJ/FliF family IXK98_RS18005 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI IXK98_RS18015 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) IXK98_RS18020 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF IXK98_RS18035 PF03958 Bacterial type II/III secretion system short domain IXK98_RS18035 PF00263 Bacterial type II and III secretion system protein IXK98_RS18070 PF00581 Rhodanese-like domain IXK98_RS18070 PF17773 UPF0176 acylphosphatase like domain IXK98_RS18085 PF01810 LysE type translocator IXK98_RS18100 PF01323 DSBA-like thioredoxin domain IXK98_RS18110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXK98_RS18110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IXK98_RS18120 PF03466 LysR substrate binding domain IXK98_RS18120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS18130 PF13302 Acetyltransferase (GNAT) domain IXK98_RS18135 PF01047 MarR family IXK98_RS18140 PF02566 OsmC-like protein IXK98_RS18145 PF08267 Cobalamin-independent synthase, N-terminal domain IXK98_RS18145 PF01717 Cobalamin-independent synthase, Catalytic domain IXK98_RS18150 PF03466 LysR substrate binding domain IXK98_RS18150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS18170 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS18170 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS18170 PF00563 EAL domain IXK98_RS18175 PF08497 Radical SAM N-terminal IXK98_RS18175 PF11842 Domain of unknown function (DUF3362) IXK98_RS18175 PF04055 Radical SAM superfamily IXK98_RS18180 PF00563 EAL domain IXK98_RS18180 PF13188 PAS domain IXK98_RS18180 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS18180 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS18185 PF01339 CheB methylesterase IXK98_RS18185 PF00072 Response regulator receiver domain IXK98_RS18190 PF03705 CheR methyltransferase, all-alpha domain IXK98_RS18190 PF01739 CheR methyltransferase, SAM binding domain IXK98_RS18195 PF01584 CheW-like domain IXK98_RS18200 PF01584 CheW-like domain IXK98_RS18205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS18205 PF00672 HAMP domain IXK98_RS18210 PF01584 CheW-like domain IXK98_RS18210 PF09078 CheY binding IXK98_RS18210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS18210 PF01627 Hpt domain IXK98_RS18210 PF02895 Signal transducing histidine kinase, homodimeric domain IXK98_RS18220 PF00072 Response regulator receiver domain IXK98_RS18230 PF00266 Aminotransferase class-V IXK98_RS18240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS18240 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS18240 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS18255 PF04994 TfoX C-terminal domain IXK98_RS18255 PF04993 TfoX N-terminal domain IXK98_RS18265 PF03956 Lysine exporter LysO IXK98_RS18275 PF00282 Pyridoxal-dependent decarboxylase conserved domain IXK98_RS18280 PF01418 Helix-turn-helix domain, rpiR family IXK98_RS18280 PF01380 SIS domain IXK98_RS18285 PF00465 Iron-containing alcohol dehydrogenase IXK98_RS18285 PF00171 Aldehyde dehydrogenase family IXK98_RS18290 PF00462 Glutaredoxin IXK98_RS18295 PF02080 TrkA-C domain IXK98_RS18295 PF06826 Predicted Permease Membrane Region IXK98_RS18300 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS18305 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS18310 PF00497 Bacterial extracellular solute-binding proteins, family 3 IXK98_RS18315 PF00005 ABC transporter IXK98_RS18325 PF01228 Glycine radical IXK98_RS18325 PF02901 Pyruvate formate lyase-like IXK98_RS18335 PF00672 HAMP domain IXK98_RS18335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS18340 PF04055 Radical SAM superfamily IXK98_RS18350 PF03887 YfbU domain IXK98_RS18365 PF08298 PrkA AAA domain IXK98_RS18365 PF06798 PrkA serine protein kinase C-terminal domain IXK98_RS18370 PF04285 Protein of unknown function (DUF444) IXK98_RS18375 PF04293 SpoVR like protein IXK98_RS18380 PF02348 Cytidylyltransferase IXK98_RS18385 PF03966 Trm112p-like protein IXK98_RS18390 PF02606 Tetraacyldisaccharide-1-P 4'-kinase IXK98_RS18395 PF00005 ABC transporter IXK98_RS18395 PF00664 ABC transporter transmembrane region IXK98_RS18400 PF03772 Competence protein IXK98_RS18400 PF00753 Metallo-beta-lactamase superfamily IXK98_RS18400 PF13567 Domain of unknown function (DUF4131) IXK98_RS18425 PF02687 FtsX-like permease family IXK98_RS18425 PF12704 MacB-like periplasmic core domain IXK98_RS18430 PF00005 ABC transporter IXK98_RS18435 PF12704 MacB-like periplasmic core domain IXK98_RS18435 PF02687 FtsX-like permease family IXK98_RS18455 PF13302 Acetyltransferase (GNAT) domain IXK98_RS18460 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS18465 PF05728 Uncharacterised protein family (UPF0227) IXK98_RS18475 PF13036 Peptidoglycan-synthase activator LpoB IXK98_RS18475 PF08139 Prokaryotic membrane lipoprotein lipid attachment site IXK98_RS18490 PF01230 HIT domain IXK98_RS18495 PF00672 HAMP domain IXK98_RS18495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS18505 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS18505 PF07840 FadR C-terminal domain IXK98_RS18510 PF06450 Bacterial Na+/H+ antiporter B (NhaB) IXK98_RS18515 PF02600 Disulfide bond formation protein DsbB IXK98_RS18520 PF09397 Ftsk gamma domain IXK98_RS18520 PF01580 FtsK/SpoIIIE family IXK98_RS18520 PF17854 FtsK alpha domain IXK98_RS18520 PF13491 4TM region of DNA translocase FtsK/SpoIIIE IXK98_RS18525 PF01037 Lrp/AsnC ligand binding domain IXK98_RS18530 PF05222 Alanine dehydrogenase/PNT, N-terminal domain IXK98_RS18530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain IXK98_RS18535 PF04217 Protein of unknown function, DUF412 IXK98_RS18540 PF00871 Acetokinase family IXK98_RS18545 PF01515 Phosphate acetyl/butaryl transferase IXK98_RS18545 PF07085 DRTGG domain IXK98_RS18550 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS18555 PF13409 Glutathione S-transferase, N-terminal domain IXK98_RS18560 PF00005 ABC transporter IXK98_RS18560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS18565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS18565 PF00005 ABC transporter IXK98_RS18570 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS18570 PF12911 N-terminal TM domain of oligopeptide transport permease C IXK98_RS18575 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS18580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS18590 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) IXK98_RS18605 PF12704 MacB-like periplasmic core domain IXK98_RS18605 PF02687 FtsX-like permease family IXK98_RS18605 PF00005 ABC transporter IXK98_RS18610 PF00005 ABC transporter IXK98_RS18610 PF12704 MacB-like periplasmic core domain IXK98_RS18610 PF02687 FtsX-like permease family IXK98_RS18615 PF02687 FtsX-like permease family IXK98_RS18615 PF12704 MacB-like periplasmic core domain IXK98_RS18625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS18635 PF00873 AcrB/AcrD/AcrF family IXK98_RS18655 PF01757 Acyltransferase family IXK98_RS18675 PF13609 Gram-negative porin IXK98_RS18685 PF07969 Amidohydrolase family IXK98_RS18710 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS18720 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain IXK98_RS18725 PF09619 Type III secretion system lipoprotein chaperone (YscW) IXK98_RS18740 PF01037 Lrp/AsnC ligand binding domain IXK98_RS18740 PF13404 AsnC-type helix-turn-helix domain IXK98_RS18745 PF00291 Pyridoxal-phosphate dependent enzyme IXK98_RS18765 PF07690 Major Facilitator Superfamily IXK98_RS18770 PF03601 Conserved hypothetical protein 698 IXK98_RS18780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS18780 PF03466 LysR substrate binding domain IXK98_RS18785 PF00367 phosphotransferase system, EIIB IXK98_RS18785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IXK98_RS18785 PF02378 Phosphotransferase system, EIIC IXK98_RS18790 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS18790 PF00501 AMP-binding enzyme IXK98_RS18795 PF13378 Enolase C-terminal domain-like IXK98_RS18800 PF00378 Enoyl-CoA hydratase/isomerase IXK98_RS18805 PF12697 Alpha/beta hydrolase family IXK98_RS18810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IXK98_RS18810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IXK98_RS18810 PF16582 Middle domain of thiamine pyrophosphate IXK98_RS18815 PF00425 chorismate binding enzyme IXK98_RS18820 PF00155 Aminotransferase class I and II IXK98_RS18830 PF03466 LysR substrate binding domain IXK98_RS18830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS18835 PF13533 Biotin-lipoyl like IXK98_RS18840 PF07690 Major Facilitator Superfamily IXK98_RS18845 PF13286 Phosphohydrolase-associated domain IXK98_RS18845 PF01966 HD domain IXK98_RS18850 PF00962 Adenosine/AMP deaminase IXK98_RS18865 PF00270 DEAD/DEAH box helicase IXK98_RS18865 PF00271 Helicase conserved C-terminal domain IXK98_RS18890 PF03824 High-affinity nickel-transport protein IXK98_RS18895 PF02583 Metal-sensitive transcriptional repressor IXK98_RS18900 PF01343 Peptidase family S49 IXK98_RS18900 PF08496 Peptidase family S49 N-terminal IXK98_RS18905 PF00106 short chain dehydrogenase IXK98_RS18920 PF14579 Helix-hairpin-helix motif IXK98_RS18920 PF07733 Bacterial DNA polymerase III alpha NTPase domain IXK98_RS18920 PF01336 OB-fold nucleic acid binding domain IXK98_RS18920 PF02811 PHP domain IXK98_RS18920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IXK98_RS18925 PF01584 CheW-like domain IXK98_RS18925 PF00072 Response regulator receiver domain IXK98_RS18930 PF00480 ROK family IXK98_RS18935 PF02887 Pyruvate kinase, alpha/beta domain IXK98_RS18935 PF00224 Pyruvate kinase, barrel domain IXK98_RS18940 PF01734 Patatin-like phospholipase IXK98_RS18960 PF00367 phosphotransferase system, EIIB IXK98_RS18960 PF02378 Phosphotransferase system, EIIC IXK98_RS18965 PF01026 TatD related DNase IXK98_RS18970 PF09115 DNA polymerase III, delta subunit, C terminal IXK98_RS18975 PF02223 Thymidylate kinase IXK98_RS18980 PF02618 YceG-like family IXK98_RS18985 PF01063 Amino-transferase class IV IXK98_RS18990 PF02801 Beta-ketoacyl synthase, C-terminal domain IXK98_RS18990 PF00109 Beta-ketoacyl synthase, N-terminal domain IXK98_RS18995 PF00550 Phosphopantetheine attachment site IXK98_RS19005 PF00698 Acyl transferase domain IXK98_RS19010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IXK98_RS19010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III IXK98_RS19015 PF02504 Fatty acid synthesis protein IXK98_RS19020 PF01783 Ribosomal L32p protein family IXK98_RS19025 PF02620 Large ribosomal RNA subunit accumulation protein YceD IXK98_RS19030 PF02545 Maf-like protein IXK98_RS19035 PF00849 RNA pseudouridylate synthase IXK98_RS19035 PF01479 S4 domain IXK98_RS19040 PF10150 Ribonuclease E/G family IXK98_RS19040 PF00575 S1 RNA binding domain IXK98_RS19040 PF12111 Polyribonucleotide phosphorylase C terminal IXK98_RS19045 PF01740 STAS domain IXK98_RS19045 PF00916 Sulfate permease family IXK98_RS19050 PF00570 HRDC domain IXK98_RS19050 PF01612 3'-5' exonuclease IXK98_RS19055 PF00501 AMP-binding enzyme IXK98_RS19055 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS19060 PF00561 alpha/beta hydrolase fold IXK98_RS19065 PF03843 Outer membrane lipoprotein Slp family IXK98_RS19075 PF00814 Glycoprotease family IXK98_RS19080 PF04851 Type III restriction enzyme, res subunit IXK98_RS19080 PF13307 Helicase C-terminal domain IXK98_RS19090 PF01842 ACT domain IXK98_RS19090 PF00551 Formyl transferase IXK98_RS19095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IXK98_RS19095 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS19100 PF01343 Peptidase family S49 IXK98_RS19115 PF00083 Sugar (and other) transporter IXK98_RS19120 PF17763 Glutaminase/Asparaginase C-terminal domain IXK98_RS19120 PF00710 Asparaginase, N-terminal IXK98_RS19125 PF04389 Peptidase family M28 IXK98_RS19125 PF04151 Bacterial pre-peptidase C-terminal domain IXK98_RS19130 PF02403 Seryl-tRNA synthetase N-terminal domain IXK98_RS19130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IXK98_RS19135 PF12002 MgsA AAA+ ATPase C terminal IXK98_RS19135 PF16193 AAA C-terminal domain IXK98_RS19135 PF00004 ATPase family associated with various cellular activities (AAA) IXK98_RS19140 PF03548 Outer membrane lipoprotein carrier protein LolA IXK98_RS19145 PF07516 SecA Wing and Scaffold domain IXK98_RS19145 PF07517 SecA DEAD-like domain IXK98_RS19145 PF01043 SecA preprotein cross-linking domain IXK98_RS19145 PF02810 SEC-C motif IXK98_RS19150 PF07963 Prokaryotic N-terminal methylation motif IXK98_RS19155 PF01207 Dihydrouridine synthase (Dus) IXK98_RS19160 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS19165 PF00005 ABC transporter IXK98_RS19170 PF02653 Branched-chain amino acid transport system / permease component IXK98_RS19185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS19185 PF03466 LysR substrate binding domain IXK98_RS19195 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) IXK98_RS19205 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family IXK98_RS19210 PF18073 Rubredoxin metal binding domain IXK98_RS19215 PF06305 Lipopolysaccharide assembly protein A domain IXK98_RS19220 PF00216 Bacterial DNA-binding protein IXK98_RS19225 PF00575 S1 RNA binding domain IXK98_RS19230 PF02224 Cytidylate kinase IXK98_RS19240 PF13145 PPIC-type PPIASE domain IXK98_RS19245 PF00216 Bacterial DNA-binding protein IXK98_RS19250 PF00004 ATPase family associated with various cellular activities (AAA) IXK98_RS19250 PF05362 Lon protease (S16) C-terminal proteolytic domain IXK98_RS19250 PF02190 ATP-dependent protease La (LON) substrate-binding domain IXK98_RS19255 PF06689 ClpX C4-type zinc finger IXK98_RS19255 PF10431 C-terminal, D2-small domain, of ClpB protein IXK98_RS19255 PF07724 AAA domain (Cdc48 subfamily) IXK98_RS19260 PF00574 Clp protease IXK98_RS19265 PF05697 Bacterial trigger factor protein (TF) IXK98_RS19265 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXK98_RS19265 PF05698 Bacterial trigger factor protein (TF) C-terminus IXK98_RS19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS19270 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS19270 PF02743 Cache domain IXK98_RS19275 PF00158 Sigma-54 interaction domain IXK98_RS19275 PF02954 Bacterial regulatory protein, Fis family IXK98_RS19275 PF00072 Response regulator receiver domain IXK98_RS19280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component IXK98_RS19285 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component IXK98_RS19290 PF03480 Bacterial extracellular solute-binding protein, family 7 IXK98_RS19295 PF17912 MalK OB fold domain IXK98_RS19295 PF00005 ABC transporter IXK98_RS19295 PF03459 TOBE domain IXK98_RS19300 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS19305 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS19310 PF01547 Bacterial extracellular solute-binding protein IXK98_RS19315 PF00672 HAMP domain IXK98_RS19315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS19315 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS19320 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS19320 PF00072 Response regulator receiver domain IXK98_RS19330 PF00072 Response regulator receiver domain IXK98_RS19330 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXK98_RS19330 PF01627 Hpt domain IXK98_RS19330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS19330 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS19330 PF00672 HAMP domain IXK98_RS19335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS19335 PF00672 HAMP domain IXK98_RS19335 PF12729 Four helix bundle sensory module for signal transduction IXK98_RS19355 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain IXK98_RS19355 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IXK98_RS19360 PF07670 Nucleoside recognition IXK98_RS19360 PF01773 Na+ dependent nucleoside transporter N-terminus IXK98_RS19360 PF07662 Na+ dependent nucleoside transporter C-terminus IXK98_RS19365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS19365 PF03466 LysR substrate binding domain IXK98_RS19370 PF13406 Transglycosylase SLT domain IXK98_RS19375 PF05166 YcgL domain IXK98_RS19380 PF03775 Septum formation inhibitor MinC, C-terminal domain IXK98_RS19380 PF05209 Septum formation inhibitor MinC, N-terminal domain IXK98_RS19385 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain IXK98_RS19390 PF03776 Septum formation topological specificity factor MinE IXK98_RS19395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS19395 PF00672 HAMP domain IXK98_RS19400 PF00465 Iron-containing alcohol dehydrogenase IXK98_RS19400 PF00171 Aldehyde dehydrogenase family IXK98_RS19405 PF01914 MarC family integral membrane protein IXK98_RS19410 PF00027 Cyclic nucleotide-binding domain IXK98_RS19410 PF00520 Ion transport protein IXK98_RS19420 PF02774 Semialdehyde dehydrogenase, dimerisation domain IXK98_RS19420 PF01118 Semialdehyde dehydrogenase, NAD binding domain IXK98_RS19425 PF03553 Na+/H+ antiporter family IXK98_RS19440 PF04245 37-kD nucleoid-associated bacterial protein IXK98_RS19445 PF07208 Protein of unknown function (DUF1414) IXK98_RS19450 PF11893 Domain of unknown function (DUF3413) IXK98_RS19450 PF00884 Sulfatase IXK98_RS19465 PF00293 NUDIX domain IXK98_RS19470 PF00850 Histone deacetylase domain IXK98_RS19475 PF02264 LamB porin IXK98_RS19480 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS19490 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS19495 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS19500 PF00232 Glycosyl hydrolase family 1 IXK98_RS19505 PF08402 TOBE domain IXK98_RS19505 PF00005 ABC transporter IXK98_RS19510 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS19515 PF00106 short chain dehydrogenase IXK98_RS19520 PF01161 Phosphatidylethanolamine-binding protein IXK98_RS19535 PF01131 DNA topoisomerase IXK98_RS19535 PF01751 Toprim domain IXK98_RS19540 PF00462 Glutaredoxin IXK98_RS19545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IXK98_RS19545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IXK98_RS19560 PF01451 Low molecular weight phosphotyrosine protein phosphatase IXK98_RS19570 PF12729 Four helix bundle sensory module for signal transduction IXK98_RS19570 PF00672 HAMP domain IXK98_RS19570 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS19575 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP IXK98_RS19575 PF12557 Cob(I)alamin adenosyltransferase N terminal IXK98_RS19590 PF00485 Phosphoribulokinase / Uridine kinase family IXK98_RS19595 PF10609 NUBPL iron-transfer P-loop NTPase IXK98_RS19600 PF09334 tRNA synthetases class I (M) IXK98_RS19600 PF01588 Putative tRNA binding domain IXK98_RS19615 PF01048 Phosphorylase superfamily IXK98_RS19620 PF00403 Heavy-metal-associated domain IXK98_RS19625 PF01554 MatE IXK98_RS19630 PF01743 Poly A polymerase head domain IXK98_RS19630 PF00571 CBS domain IXK98_RS19640 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS19645 PF02391 MoaE protein IXK98_RS19650 PF02597 ThiS family IXK98_RS19655 PF01967 MoaC family IXK98_RS19660 PF00994 Probable molybdopterin binding domain IXK98_RS19665 PF06463 Molybdenum Cofactor Synthesis C IXK98_RS19665 PF04055 Radical SAM superfamily IXK98_RS19670 PF01933 Uncharacterised protein family UPF0052 IXK98_RS19675 PF01627 Hpt domain IXK98_RS19680 PF00158 Sigma-54 interaction domain IXK98_RS19680 PF00072 Response regulator receiver domain IXK98_RS19680 PF02954 Bacterial regulatory protein, Fis family IXK98_RS19685 PF12344 Ultra-violet resistance protein B IXK98_RS19685 PF04851 Type III restriction enzyme, res subunit IXK98_RS19685 PF02151 UvrB/uvrC motif IXK98_RS19685 PF17757 UvrB interaction domain IXK98_RS19685 PF00271 Helicase conserved C-terminal domain IXK98_RS19695 PF07702 UTRA domain IXK98_RS19695 PF00392 Bacterial regulatory proteins, gntR family IXK98_RS19700 PF01547 Bacterial extracellular solute-binding protein IXK98_RS19720 PF08402 TOBE domain IXK98_RS19720 PF00005 ABC transporter IXK98_RS19730 PF02508 Rnf-Nqr subunit, membrane protein IXK98_RS19735 PF04060 Putative Fe-S cluster IXK98_RS19740 PF13375 RnfC Barrel sandwich hybrid domain IXK98_RS19740 PF12838 4Fe-4S dicluster domain IXK98_RS19740 PF10531 SLBB domain IXK98_RS19740 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit IXK98_RS19745 PF03116 NQR2, RnfD, RnfE family IXK98_RS19750 PF04205 FMN-binding domain IXK98_RS19755 PF02508 Rnf-Nqr subunit, membrane protein IXK98_RS19760 PF10576 Iron-sulfur binding domain of endonuclease III IXK98_RS19760 PF00730 HhH-GPD superfamily base excision DNA repair protein IXK98_RS19760 PF00633 Helix-hairpin-helix motif IXK98_RS19765 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IXK98_RS19770 PF10952 Protein of unknown function (DUF2753) IXK98_RS19775 PF00691 OmpA family IXK98_RS19775 PF18393 MotY N-terminal domain IXK98_RS19780 PF00929 Exonuclease IXK98_RS19785 PF03553 Na+/H+ antiporter family IXK98_RS19785 PF13726 Na+-H+ antiporter family IXK98_RS19790 PF06804 NlpB/DapX lipoprotein IXK98_RS19795 PF00701 Dihydrodipicolinate synthetase family IXK98_RS19800 PF01842 ACT domain IXK98_RS19805 PF00578 AhpC/TSA family IXK98_RS19810 PF02743 Cache domain IXK98_RS19810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS19810 PF00672 HAMP domain IXK98_RS19815 PF01594 AI-2E family transporter IXK98_RS19825 PF01435 Peptidase family M48 IXK98_RS19825 PF13181 Tetratricopeptide repeat IXK98_RS19830 PF03960 ArsC family IXK98_RS19835 PF03358 NADPH-dependent FMN reductase IXK98_RS19850 PF00860 Permease family IXK98_RS19855 PF04073 Aminoacyl-tRNA editing domain IXK98_RS19860 PF00149 Calcineurin-like phosphoesterase IXK98_RS19860 PF02872 5'-nucleotidase, C-terminal domain IXK98_RS19865 PF00793 DAHP synthetase I family IXK98_RS19870 PF13369 Transglutaminase-like superfamily IXK98_RS19880 PF13847 Methyltransferase domain IXK98_RS19880 PF17827 PrmC N-terminal domain IXK98_RS19885 PF00472 RF-1 domain IXK98_RS19885 PF03462 PCRF domain IXK98_RS19890 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain IXK98_RS19890 PF01488 Shikimate / quinate 5-dehydrogenase IXK98_RS19890 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain IXK98_RS19895 PF03550 Outer membrane lipoprotein LolB IXK98_RS19900 PF00288 GHMP kinases N terminal domain IXK98_RS19900 PF08544 GHMP kinases C terminal IXK98_RS19905 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase IXK98_RS19905 PF14572 Phosphoribosyl synthetase-associated domain IXK98_RS19910 PF01195 Peptidyl-tRNA hydrolase IXK98_RS19915 PF01926 50S ribosome-binding GTPase IXK98_RS19915 PF06071 Protein of unknown function (DUF933) IXK98_RS20020 PF00700 Bacterial flagellin C-terminal helical region IXK98_RS20020 PF07196 Flagellin hook IN motif IXK98_RS20020 PF00669 Bacterial flagellin N-terminal helical region IXK98_RS20025 PF00700 Bacterial flagellin C-terminal helical region IXK98_RS20025 PF00669 Bacterial flagellin N-terminal helical region IXK98_RS20025 PF07196 Flagellin hook IN motif IXK98_RS20030 PF00700 Bacterial flagellin C-terminal helical region IXK98_RS20030 PF00669 Bacterial flagellin N-terminal helical region IXK98_RS20035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXK98_RS20035 PF07196 Flagellin hook IN motif IXK98_RS20045 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase IXK98_RS20045 PF10135 Rod binding protein IXK98_RS20050 PF02119 Flagellar P-ring protein IXK98_RS20055 PF02107 Flagellar L-ring protein IXK98_RS20060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXK98_RS20060 PF00460 Flagella basal body rod protein IXK98_RS20065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXK98_RS20065 PF00460 Flagella basal body rod protein IXK98_RS20070 PF07559 Flagellar basal body protein FlaE IXK98_RS20070 PF00460 Flagella basal body rod protein IXK98_RS20070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXK98_RS20075 PF13861 FlgD Tudor-like domain IXK98_RS20075 PF13860 FlgD Ig-like domain IXK98_RS20075 PF03963 Flagellar hook capping protein - N-terminal region IXK98_RS20080 PF06429 Flagellar basal body rod FlgEFG protein C-terminal IXK98_RS20080 PF00460 Flagella basal body rod protein IXK98_RS20085 PF00460 Flagella basal body rod protein IXK98_RS20090 PF03705 CheR methyltransferase, all-alpha domain IXK98_RS20090 PF01739 CheR methyltransferase, SAM binding domain IXK98_RS20095 PF01584 CheW-like domain IXK98_RS20095 PF00072 Response regulator receiver domain IXK98_RS20105 PF04316 Anti-sigma-28 factor, FlgM IXK98_RS20140 PF00691 OmpA family IXK98_RS20140 PF01389 OmpA-like transmembrane domain IXK98_RS20145 PF00691 OmpA family IXK98_RS20145 PF13488 Glycine zipper IXK98_RS20150 PF00749 tRNA synthetases class I (E and Q), catalytic domain IXK98_RS20160 PF13609 Gram-negative porin IXK98_RS20165 PF00403 Heavy-metal-associated domain IXK98_RS20190 PF00762 Ferrochelatase IXK98_RS20195 PF05191 Adenylate kinase, active site lid IXK98_RS20200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS20200 PF00183 Hsp90 protein IXK98_RS20205 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS20210 PF17323 Trans-membrane regulatory protein ToxS IXK98_RS20225 PF12850 Calcineurin-like phosphoesterase superfamily domain IXK98_RS20240 PF07556 Protein of unknown function (DUF1538) IXK98_RS20245 PF07556 Protein of unknown function (DUF1538) IXK98_RS20250 PF08338 Domain of unknown function (DUF1731) IXK98_RS20250 PF01370 NAD dependent epimerase/dehydratase family IXK98_RS20255 PF00106 short chain dehydrogenase IXK98_RS20260 PF00085 Thioredoxin IXK98_RS20265 PF16200 C-terminal region of band_7 IXK98_RS20265 PF01145 SPFH domain / Band 7 family IXK98_RS20285 PF13609 Gram-negative porin IXK98_RS20290 PF00533 BRCA1 C Terminus (BRCT) domain IXK98_RS20290 PF03120 NAD-dependent DNA ligase OB-fold domain IXK98_RS20290 PF01653 NAD-dependent DNA ligase adenylation domain IXK98_RS20290 PF12826 Helix-hairpin-helix motif IXK98_RS20290 PF03119 NAD-dependent DNA ligase C4 zinc finger domain IXK98_RS20295 PF04354 ZipA, C-terminal FtsZ-binding domain IXK98_RS20305 PF00291 Pyridoxal-phosphate dependent enzyme IXK98_RS20310 PF00381 PTS HPr component phosphorylation site IXK98_RS20315 PF00391 PEP-utilising enzyme, mobile domain IXK98_RS20315 PF05524 PEP-utilising enzyme, N-terminal IXK98_RS20315 PF02896 PEP-utilising enzyme, TIM barrel domain IXK98_RS20320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 IXK98_RS20325 PF01494 FAD binding domain IXK98_RS20330 PF01938 TRAM domain IXK98_RS20330 PF00919 Uncharacterized protein family UPF0004 IXK98_RS20330 PF04055 Radical SAM superfamily IXK98_RS20335 PF02562 PhoH-like protein IXK98_RS20340 PF02130 Uncharacterized protein family UPF0054 IXK98_RS20345 PF00571 CBS domain IXK98_RS20345 PF03471 Transporter associated domain IXK98_RS20350 PF00795 Carbon-nitrogen hydrolase IXK98_RS20355 PF07295 Zinc-ribbon containing domain IXK98_RS20360 PF00133 tRNA synthetases class I (I, L, M and V) IXK98_RS20360 PF13603 Leucyl-tRNA synthetase, Domain 2 IXK98_RS20360 PF08264 Anticodon-binding domain of tRNA IXK98_RS20365 PF04390 Lipopolysaccharide-assembly IXK98_RS20370 PF14840 Processivity clamp loader gamma complex DNA pol III C-term IXK98_RS20370 PF06144 DNA polymerase III, delta subunit IXK98_RS20380 PF02590 Predicted SPOUT methyltransferase IXK98_RS20385 PF00905 Penicillin binding protein transpeptidase domain IXK98_RS20385 PF03717 Penicillin-binding Protein dimerisation domain IXK98_RS20390 PF01098 Cell cycle protein IXK98_RS20395 PF05036 Sporulation related domain IXK98_RS20395 PF03330 Lytic transglycolase IXK98_RS20400 PF07943 Penicillin-binding protein 5, C-terminal domain IXK98_RS20400 PF00768 D-alanyl-D-alanine carboxypeptidase IXK98_RS20405 PF04359 Protein of unknown function (DUF493) IXK98_RS20410 PF03099 Biotin/lipoate A/B protein ligase family IXK98_RS20415 PF04055 Radical SAM superfamily IXK98_RS20415 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family IXK98_RS20425 PF00464 Serine hydroxymethyltransferase IXK98_RS20435 PF00873 AcrB/AcrD/AcrF family IXK98_RS20465 PF16657 Maltogenic Amylase, C-terminal domain IXK98_RS20465 PF00128 Alpha amylase, catalytic domain IXK98_RS20470 PF02378 Phosphotransferase system, EIIC IXK98_RS20470 PF00367 phosphotransferase system, EIIB IXK98_RS20475 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS20490 PF09383 NIL domain IXK98_RS20490 PF00005 ABC transporter IXK98_RS20495 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS20500 PF03180 NLPA lipoprotein IXK98_RS20510 PF03806 AbgT putative transporter family IXK98_RS20515 PF00444 Ribosomal protein L36 IXK98_RS20520 PF01197 Ribosomal protein L31 IXK98_RS20525 PF18389 TrmO C-terminal domain IXK98_RS20525 PF01980 tRNA-methyltransferase O IXK98_RS20530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) IXK98_RS20530 PF03129 Anticodon binding domain IXK98_RS20530 PF04073 Aminoacyl-tRNA editing domain IXK98_RS20535 PF13230 Glutamine amidotransferases class-II IXK98_RS20540 PF13580 SIS domain IXK98_RS20555 PF00929 Exonuclease IXK98_RS20560 PF00075 RNase H IXK98_RS20565 PF08241 Methyltransferase domain IXK98_RS20570 PF00753 Metallo-beta-lactamase superfamily IXK98_RS20570 PF16123 Hydroxyacylglutathione hydrolase C-terminus IXK98_RS20575 PF01464 Transglycosylase SLT domain IXK98_RS20575 PF01476 LysM domain IXK98_RS20585 PF03372 Endonuclease/Exonuclease/phosphatase family IXK98_RS20590 PF00543 Nitrogen regulatory protein P-II IXK98_RS20595 PF00034 Cytochrome c IXK98_RS20600 PF09179 TilS substrate binding domain IXK98_RS20600 PF11734 TilS substrate C-terminal domain IXK98_RS20600 PF01171 PP-loop family IXK98_RS20605 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit IXK98_RS20610 PF01336 OB-fold nucleic acid binding domain IXK98_RS20610 PF07733 Bacterial DNA polymerase III alpha NTPase domain IXK98_RS20610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain IXK98_RS20610 PF02811 PHP domain IXK98_RS20610 PF14579 Helix-hairpin-helix motif IXK98_RS20615 PF01351 Ribonuclease HII IXK98_RS20620 PF02684 Lipid-A-disaccharide synthetase IXK98_RS20625 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS20625 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 IXK98_RS20630 PF07977 FabA-like domain IXK98_RS20635 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS20635 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD IXK98_RS20640 PF03938 Outer membrane protein (OmpH-like) IXK98_RS20645 PF01103 Surface antigen IXK98_RS20645 PF07244 Surface antigen variable number repeat IXK98_RS20650 PF17820 PDZ domain IXK98_RS20650 PF02163 Peptidase family M50 IXK98_RS20655 PF13288 DXP reductoisomerase C-terminal domain IXK98_RS20655 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain IXK98_RS20655 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase IXK98_RS20665 PF01255 Putative undecaprenyl diphosphate synthase IXK98_RS20670 PF01765 Ribosome recycling factor IXK98_RS20675 PF00696 Amino acid kinase family IXK98_RS20680 PF00889 Elongation factor TS IXK98_RS20685 PF00318 Ribosomal protein S2 IXK98_RS20690 PF00557 Metallopeptidase family M24 IXK98_RS20695 PF01842 ACT domain IXK98_RS20695 PF08335 GlnD PII-uridylyltransferase IXK98_RS20695 PF01966 HD domain IXK98_RS20695 PF01909 Nucleotidyltransferase domain IXK98_RS20700 PF11944 Protein of unknown function (DUF3461) IXK98_RS20705 PF04608 Phosphatidylglycerophosphatase A IXK98_RS20710 PF02769 AIR synthase related protein, C-terminal domain IXK98_RS20710 PF00586 AIR synthase related protein, N-terminal domain IXK98_RS20715 PF01029 NusB family IXK98_RS20720 PF00885 6,7-dimethyl-8-ribityllumazine synthase IXK98_RS20725 PF00925 GTP cyclohydrolase II IXK98_RS20725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IXK98_RS20730 PF00677 Lumazine binding domain IXK98_RS20735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region IXK98_RS20735 PF01872 RibD C-terminal domain IXK98_RS20740 PF03477 ATP cone domain IXK98_RS20745 PF00171 Aldehyde dehydrogenase family IXK98_RS20750 PF01472 PUA domain IXK98_RS20750 PF00696 Amino acid kinase family IXK98_RS20755 PF07417 Sigma factor-binding transcriptional regulator Crl IXK98_RS20760 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) IXK98_RS20765 PF00156 Phosphoribosyl transferase domain IXK98_RS20770 PF00860 Permease family IXK98_RS20775 PF01546 Peptidase family M20/M25/M40 IXK98_RS20775 PF07687 Peptidase dimerisation domain IXK98_RS20780 PF08443 RimK-like ATP-grasp domain IXK98_RS20780 PF18030 RimK PreATP-grasp domain IXK98_RS20785 PF08443 RimK-like ATP-grasp domain IXK98_RS20785 PF18030 RimK PreATP-grasp domain IXK98_RS20795 PF00209 Sodium:neurotransmitter symporter family IXK98_RS20800 PF01590 GAF domain IXK98_RS20800 PF00360 Phytochrome region IXK98_RS20800 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS20800 PF00563 EAL domain IXK98_RS20815 PF00271 Helicase conserved C-terminal domain IXK98_RS20815 PF00570 HRDC domain IXK98_RS20815 PF16124 RecQ zinc-binding IXK98_RS20815 PF09382 RQC domain IXK98_RS20815 PF00270 DEAD/DEAH box helicase IXK98_RS20820 PF00817 impB/mucB/samB family IXK98_RS20820 PF11798 IMS family HHH motif IXK98_RS20820 PF11799 impB/mucB/samB family C-terminal domain IXK98_RS20825 PF00072 Response regulator receiver domain IXK98_RS20825 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS20830 PF04400 (Na+)-NQR maturation NqrM IXK98_RS20835 PF02424 ApbE family IXK98_RS20840 PF00970 Oxidoreductase FAD-binding domain IXK98_RS20840 PF00175 Oxidoreductase NAD-binding domain IXK98_RS20840 PF00111 2Fe-2S iron-sulfur cluster binding domain IXK98_RS20845 PF02508 Rnf-Nqr subunit, membrane protein IXK98_RS20850 PF02508 Rnf-Nqr subunit, membrane protein IXK98_RS20855 PF04205 FMN-binding domain IXK98_RS20860 PF03116 NQR2, RnfD, RnfE family IXK98_RS20865 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) IXK98_RS20865 PF11973 NQRA C-terminal domain IXK98_RS20870 PF01722 BolA-like protein IXK98_RS20875 PF05175 Methyltransferase small domain IXK98_RS20885 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IXK98_RS20890 PF07690 Major Facilitator Superfamily IXK98_RS20900 PF04542 Sigma-70 region 2 IXK98_RS20900 PF04545 Sigma-70, region 4 IXK98_RS20915 PF02558 Ketopantoate reductase PanE/ApbA IXK98_RS20915 PF08546 Ketopantoate reductase PanE/ApbA C terminal IXK98_RS20920 PF01965 DJ-1/PfpI family IXK98_RS20925 PF00266 Aminotransferase class-V IXK98_RS20930 PF18073 Rubredoxin metal binding domain IXK98_RS20940 PF18429 Domain of unknown function (DUF5609) IXK98_RS20950 PF01048 Phosphorylase superfamily IXK98_RS20955 PF01676 Metalloenzyme superfamily IXK98_RS20960 PF02885 Glycosyl transferase family, helical bundle domain IXK98_RS20960 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain IXK98_RS20960 PF00591 Glycosyl transferase family, a/b domain IXK98_RS20965 PF01791 DeoC/LacD family aldolase IXK98_RS20975 PF01773 Na+ dependent nucleoside transporter N-terminus IXK98_RS20975 PF07662 Na+ dependent nucleoside transporter C-terminus IXK98_RS20975 PF07670 Nucleoside recognition IXK98_RS20980 PF01026 TatD related DNase IXK98_RS20990 PF03883 Peroxide stress protein YaaA IXK98_RS20995 PF01235 Sodium:alanine symporter family IXK98_RS21010 PF03167 Uracil DNA glycosylase superfamily IXK98_RS21015 PF01261 Xylose isomerase-like TIM barrel IXK98_RS21020 PF01228 Glycine radical IXK98_RS21025 PF03466 LysR substrate binding domain IXK98_RS21025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS21030 PF01925 Sulfite exporter TauE/SafE IXK98_RS21035 PF02142 MGS-like domain IXK98_RS21035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain IXK98_RS21035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IXK98_RS21040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain IXK98_RS21040 PF00117 Glutamine amidotransferase class-I IXK98_RS21045 PF05173 Dihydrodipicolinate reductase, C-terminus IXK98_RS21045 PF01113 Dihydrodipicolinate reductase, N-terminus IXK98_RS21050 PF00293 NUDIX domain IXK98_RS21055 PF07517 SecA DEAD-like domain IXK98_RS21055 PF07516 SecA Wing and Scaffold domain IXK98_RS21055 PF02810 SEC-C motif IXK98_RS21055 PF01043 SecA preprotein cross-linking domain IXK98_RS21065 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IXK98_RS21070 PF00091 Tubulin/FtsZ family, GTPase domain IXK98_RS21070 PF12327 FtsZ family, C-terminal domain IXK98_RS21075 PF02491 SHS2 domain inserted in FTSA IXK98_RS21080 PF03799 Cell division protein FtsQ IXK98_RS21080 PF08478 POTRA domain, FtsQ-type IXK98_RS21085 PF08245 Mur ligase middle domain IXK98_RS21085 PF02875 Mur ligase family, glutamate ligase domain IXK98_RS21085 PF01225 Mur ligase family, catalytic domain IXK98_RS21090 PF03033 Glycosyltransferase family 28 N-terminal domain IXK98_RS21090 PF04101 Glycosyltransferase family 28 C-terminal domain IXK98_RS21095 PF01098 Cell cycle protein IXK98_RS21100 PF08245 Mur ligase middle domain IXK98_RS21100 PF02875 Mur ligase family, glutamate ligase domain IXK98_RS21105 PF00953 Glycosyl transferase family 4 IXK98_RS21105 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 IXK98_RS21110 PF02875 Mur ligase family, glutamate ligase domain IXK98_RS21110 PF08245 Mur ligase middle domain IXK98_RS21110 PF01225 Mur ligase family, catalytic domain IXK98_RS21115 PF08245 Mur ligase middle domain IXK98_RS21115 PF02875 Mur ligase family, glutamate ligase domain IXK98_RS21115 PF01225 Mur ligase family, catalytic domain IXK98_RS21120 PF00905 Penicillin binding protein transpeptidase domain IXK98_RS21120 PF03717 Penicillin-binding Protein dimerisation domain IXK98_RS21125 PF04999 Cell division protein FtsL IXK98_RS21130 PF01795 MraW methylase family IXK98_RS21140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases IXK98_RS21145 PF04348 LppC putative lipoprotein IXK98_RS21150 PF02021 Uncharacterised protein family UPF0102 IXK98_RS21155 PF13580 SIS domain IXK98_RS21160 PF04972 BON domain IXK98_RS21165 PF04386 Stringent starvation protein B IXK98_RS21170 PF00043 Glutathione S-transferase, C-terminal domain IXK98_RS21170 PF02798 Glutathione S-transferase, N-terminal domain IXK98_RS21175 PF02167 Cytochrome C1 family IXK98_RS21180 PF00032 Cytochrome b(C-terminal)/b6/petD IXK98_RS21180 PF00033 Cytochrome b/b6/petB IXK98_RS21185 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal IXK98_RS21185 PF00355 Rieske [2Fe-2S] domain IXK98_RS21190 PF00380 Ribosomal protein S9/S16 IXK98_RS21195 PF00572 Ribosomal protein L13 IXK98_RS21200 PF03969 AFG1-like ATPase IXK98_RS21205 PF06295 Protein of unknown function (DUF1043) IXK98_RS21210 PF00595 PDZ domain IXK98_RS21210 PF13180 PDZ domain IXK98_RS21215 PF13180 PDZ domain IXK98_RS21220 PF03989 DNA gyrase C-terminal domain, beta-propeller IXK98_RS21220 PF00521 DNA gyrase/topoisomerase IV, subunit A IXK98_RS21225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS21225 PF01751 Toprim domain IXK98_RS21225 PF00204 DNA gyrase B IXK98_RS21225 PF00986 DNA gyrase B subunit, carboxyl terminus IXK98_RS21230 PF05728 Uncharacterised protein family (UPF0227) IXK98_RS21235 PF00149 Calcineurin-like phosphoesterase IXK98_RS21240 PF06853 Protein of unknown function (DUF1249) IXK98_RS21245 PF00293 NUDIX domain IXK98_RS21250 PF02321 Outer membrane efflux protein IXK98_RS21260 PF00072 Response regulator receiver domain IXK98_RS21260 PF01627 Hpt domain IXK98_RS21260 PF18415 Histidine kinase receptor ArcB trans-membrane domain IXK98_RS21260 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS21260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS21260 PF00989 PAS fold IXK98_RS21265 PF00563 EAL domain IXK98_RS21265 PF01590 GAF domain IXK98_RS21265 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS21265 PF00360 Phytochrome region IXK98_RS21270 PF04055 Radical SAM superfamily IXK98_RS21270 PF16199 Radical_SAM C-terminal domain IXK98_RS21275 PF00310 Glutamine amidotransferases class-II IXK98_RS21275 PF04898 Glutamate synthase central domain IXK98_RS21275 PF01645 Conserved region in glutamate synthase IXK98_RS21275 PF01493 GXGXG motif IXK98_RS21280 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS21280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IXK98_RS21285 PF00310 Glutamine amidotransferases class-II IXK98_RS21285 PF04898 Glutamate synthase central domain IXK98_RS21285 PF01493 GXGXG motif IXK98_RS21285 PF01645 Conserved region in glutamate synthase IXK98_RS21290 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster IXK98_RS21290 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS21300 PF16198 tRNA pseudouridylate synthase B C-terminal domain IXK98_RS21300 PF09157 Pseudouridine synthase II TruB, C-terminal IXK98_RS21300 PF01509 TruB family pseudouridylate synthase (N terminal domain) IXK98_RS21305 PF02033 Ribosome-binding factor A IXK98_RS21310 PF04760 Translation initiation factor IF-2, N-terminal region IXK98_RS21310 PF11987 Translation-initiation factor 2 IXK98_RS21310 PF08364 Bacterial translation initiation factor IF-2 associated region IXK98_RS21310 PF00009 Elongation factor Tu GTP binding domain IXK98_RS21315 PF00575 S1 RNA binding domain IXK98_RS21315 PF13184 NusA-like KH domain IXK98_RS21315 PF08529 NusA N-terminal domain IXK98_RS21320 PF17384 RimP C-terminal SH3 domain IXK98_RS21320 PF02576 RimP N-terminal domain IXK98_RS21335 PF03840 Preprotein translocase SecG subunit IXK98_RS21340 PF13508 Acetyltransferase (GNAT) domain IXK98_RS21345 PF02036 SCP-2 sterol transfer family IXK98_RS21350 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS21350 PF00563 EAL domain IXK98_RS21350 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS21355 PF01136 Peptidase family U32 IXK98_RS21360 PF01136 Peptidase family U32 IXK98_RS21375 PF07719 Tetratricopeptide repeat IXK98_RS21375 PF13181 Tetratricopeptide repeat IXK98_RS21380 PF00575 S1 RNA binding domain IXK98_RS21380 PF03725 3' exoribonuclease family, domain 2 IXK98_RS21380 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain IXK98_RS21380 PF00013 KH domain IXK98_RS21380 PF01138 3' exoribonuclease family, domain 1 IXK98_RS21385 PF00312 Ribosomal protein S15 IXK98_RS21390 PF01048 Phosphorylase superfamily IXK98_RS21400 PF01497 Periplasmic binding protein IXK98_RS21405 PF03458 UPF0126 domain IXK98_RS21410 PF00291 Pyridoxal-phosphate dependent enzyme IXK98_RS21410 PF14821 Threonine synthase N terminus IXK98_RS21415 PF08544 GHMP kinases C terminal IXK98_RS21415 PF00288 GHMP kinases N terminal domain IXK98_RS21420 PF01842 ACT domain IXK98_RS21420 PF13840 ACT domain IXK98_RS21420 PF03447 Homoserine dehydrogenase, NAD binding domain IXK98_RS21420 PF00696 Amino acid kinase family IXK98_RS21420 PF00742 Homoserine dehydrogenase IXK98_RS21430 PF03737 Aldolase/RraA IXK98_RS21440 PF00072 Response regulator receiver domain IXK98_RS21440 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS21445 PF01467 Cytidylyltransferase-like IXK98_RS21445 PF00294 pfkB family carbohydrate kinase IXK98_RS21450 PF08335 GlnD PII-uridylyltransferase IXK98_RS21450 PF03710 Glutamate-ammonia ligase adenylyltransferase IXK98_RS21455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS21455 PF00672 HAMP domain IXK98_RS21460 PF00027 Cyclic nucleotide-binding domain IXK98_RS21460 PF00520 Ion transport protein IXK98_RS21465 PF01928 CYTH domain IXK98_RS21470 PF01865 Protein of unknown function DUF47 IXK98_RS21475 PF01384 Phosphate transporter family IXK98_RS21480 PF08239 Bacterial SH3 domain IXK98_RS21490 PF13401 AAA domain IXK98_RS21490 PF01471 Putative peptidoglycan binding domain IXK98_RS21495 PF12627 Probable RNA and SrmB- binding site of polymerase A IXK98_RS21495 PF01743 Poly A polymerase head domain IXK98_RS21495 PF01966 HD domain IXK98_RS21500 PF00113 Enolase, C-terminal TIM barrel domain IXK98_RS21500 PF03952 Enolase, N-terminal domain IXK98_RS21505 PF06418 CTP synthase N-terminus IXK98_RS21505 PF00117 Glutamine amidotransferase class-I IXK98_RS21510 PF03819 MazG nucleotide pyrophosphohydrolase domain IXK98_RS21515 PF13291 ACT domain IXK98_RS21515 PF04607 Region found in RelA / SpoT proteins IXK98_RS21515 PF02824 TGS domain IXK98_RS21520 PF01938 TRAM domain IXK98_RS21520 PF05958 tRNA (Uracil-5-)-methyltransferase IXK98_RS21525 PF00672 HAMP domain IXK98_RS21525 PF00072 Response regulator receiver domain IXK98_RS21525 PF01627 Hpt domain IXK98_RS21525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS21525 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS21525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXK98_RS21530 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS21530 PF00563 EAL domain IXK98_RS21530 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS21545 PF01648 4'-phosphopantetheinyl transferase superfamily IXK98_RS21550 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ IXK98_RS21555 PF02565 Recombination protein O C terminal IXK98_RS21555 PF11967 Recombination protein O N terminal IXK98_RS21560 PF01926 50S ribosome-binding GTPase IXK98_RS21560 PF07650 KH domain IXK98_RS21565 PF00035 Double-stranded RNA binding motif IXK98_RS21565 PF14622 Ribonuclease-III-like IXK98_RS21570 PF10502 Signal peptidase, peptidase S26 IXK98_RS21575 PF00679 Elongation factor G C-terminus IXK98_RS21575 PF00009 Elongation factor Tu GTP binding domain IXK98_RS21575 PF06421 GTP-binding protein LepA C-terminus IXK98_RS21575 PF03144 Elongation factor Tu domain 2 IXK98_RS21585 PF17188 MucB/RseB C-terminal domain IXK98_RS21585 PF03888 MucB/RseB N-terminal domain IXK98_RS21590 PF03872 Anti sigma-E protein RseA, N-terminal domain IXK98_RS21590 PF03873 Anti sigma-E protein RseA, C-terminal domain IXK98_RS21595 PF08281 Sigma-70, region 4 IXK98_RS21595 PF04542 Sigma-70 region 2 IXK98_RS21600 PF02910 Fumarate reductase flavoprotein C-term IXK98_RS21600 PF00890 FAD binding domain IXK98_RS21610 PF03937 Flavinator of succinate dehydrogenase IXK98_RS21630 PF01494 FAD binding domain IXK98_RS21635 PF01494 FAD binding domain IXK98_RS21640 PF03695 Uncharacterised protein family (UPF0149) IXK98_RS21645 PF05164 Cell division protein ZapA IXK98_RS21655 PF01812 5-formyltetrahydrofolate cyclo-ligase family IXK98_RS21660 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IXK98_RS21665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXK98_RS21665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXK98_RS21665 PF01842 ACT domain IXK98_RS21670 PF10369 Small subunit of acetolactate synthase IXK98_RS21675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IXK98_RS21675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IXK98_RS21675 PF00205 Thiamine pyrophosphate enzyme, central domain IXK98_RS21680 PF00501 AMP-binding enzyme IXK98_RS21685 PF03466 LysR substrate binding domain IXK98_RS21685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS21695 PF01569 PAP2 superfamily IXK98_RS21700 PF00682 HMGL-like IXK98_RS21700 PF08502 LeuA allosteric (dimerisation) domain IXK98_RS21705 PF00180 Isocitrate/isopropylmalate dehydrogenase IXK98_RS21710 PF00330 Aconitase family (aconitate hydratase) IXK98_RS21715 PF00694 Aconitase C-terminal domain IXK98_RS21770 PF00072 Response regulator receiver domain IXK98_RS21830 PF00589 Phage integrase family IXK98_RS21830 PF13356 Arm DNA-binding domain IXK98_RS21845 PF02664 S-Ribosylhomocysteinase (LuxS) IXK98_RS21855 PF04262 Glutamate-cysteine ligase IXK98_RS21860 PF05193 Peptidase M16 inactive domain IXK98_RS21860 PF00675 Insulinase (Peptidase family M16) IXK98_RS21865 PF09335 SNARE associated Golgi protein IXK98_RS21870 PF08240 Alcohol dehydrogenase GroES-like domain IXK98_RS21870 PF00107 Zinc-binding dehydrogenase IXK98_RS21875 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit IXK98_RS21880 PF00364 Biotin-requiring enzyme IXK98_RS21880 PF00682 HMGL-like IXK98_RS21880 PF02436 Conserved carboxylase domain IXK98_RS21885 PF04277 Oxaloacetate decarboxylase, gamma chain IXK98_RS21930 PF02599 Global regulator protein family IXK98_RS21935 PF00696 Amino acid kinase family IXK98_RS21935 PF01842 ACT domain IXK98_RS21935 PF13840 ACT domain IXK98_RS21940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain IXK98_RS21940 PF01411 tRNA synthetases class II (A) IXK98_RS21940 PF02272 DHHA1 domain IXK98_RS21945 PF02631 RecX family IXK98_RS21950 PF00154 recA bacterial DNA recombination protein IXK98_RS21955 PF02464 Competence-damaged protein IXK98_RS21960 PF05188 MutS domain II IXK98_RS21960 PF05192 MutS domain III IXK98_RS21960 PF05190 MutS family domain IV IXK98_RS21960 PF00488 MutS domain V IXK98_RS21960 PF01624 MutS domain I IXK98_RS21965 PF03739 Lipopolysaccharide export system permease LptF/LptG IXK98_RS21970 PF03739 Lipopolysaccharide export system permease LptF/LptG IXK98_RS21975 PF00883 Cytosol aminopeptidase family, catalytic domain IXK98_RS21975 PF02789 Cytosol aminopeptidase family, N-terminal domain IXK98_RS21980 PF04364 DNA polymerase III chi subunit, HolC IXK98_RS21985 PF10458 Valyl tRNA synthetase tRNA binding arm IXK98_RS21985 PF00133 tRNA synthetases class I (I, L, M and V) IXK98_RS21985 PF08264 Anticodon-binding domain of tRNA IXK98_RS21995 PF05987 Bacterial protein of unknown function (DUF898) IXK98_RS22005 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain IXK98_RS22005 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IXK98_RS22010 PF00849 RNA pseudouridylate synthase IXK98_RS22015 PF18337 RapA N-terminal Tudor like domain IXK98_RS22015 PF00271 Helicase conserved C-terminal domain IXK98_RS22015 PF18339 RapA N-terminal Tudor like domain 1 IXK98_RS22015 PF00176 SNF2 family N-terminal domain IXK98_RS22015 PF12137 RNA polymerase recycling family C-terminal IXK98_RS22020 PF02562 PhoH-like protein IXK98_RS22020 PF13638 PIN domain IXK98_RS22025 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IXK98_RS22025 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IXK98_RS22030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IXK98_RS22030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IXK98_RS22035 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain IXK98_RS22035 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain IXK98_RS22040 PF01042 Endoribonuclease L-PSP IXK98_RS22050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain IXK98_RS22050 PF00056 lactate/malate dehydrogenase, NAD binding domain IXK98_RS22055 PF02863 Arginine repressor, C-terminal domain IXK98_RS22055 PF01316 Arginine repressor, DNA binding domain IXK98_RS22060 PF16868 NMT1-like family IXK98_RS22070 PF00582 Universal stress protein family IXK98_RS22085 PF06877 Regulator of ribonuclease activity B IXK98_RS22095 PF01523 Putative modulator of DNA gyrase IXK98_RS22100 PF00795 Carbon-nitrogen hydrolase IXK98_RS22105 PF13502 AsmA-like C-terminal region IXK98_RS22105 PF13116 Protein of unknown function IXK98_RS22110 PF00575 S1 RNA binding domain IXK98_RS22110 PF10150 Ribonuclease E/G family IXK98_RS22115 PF02545 Maf-like protein IXK98_RS22120 PF04093 rod shape-determining protein MreD IXK98_RS22125 PF04085 rod shape-determining protein MreC IXK98_RS22160 PF07963 Prokaryotic N-terminal methylation motif IXK98_RS22165 PF07963 Prokaryotic N-terminal methylation motif IXK98_RS22175 PF00482 Type II secretion system (T2SS), protein F IXK98_RS22180 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain IXK98_RS22180 PF00437 Type II/IV secretion system protein IXK98_RS22190 PF13401 AAA domain IXK98_RS22190 PF01471 Putative peptidoglycan binding domain IXK98_RS22195 PF00263 Bacterial type II and III secretion system protein IXK98_RS22195 PF03958 Bacterial type II/III secretion system short domain IXK98_RS22215 PF00563 EAL domain IXK98_RS22215 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS22215 PF17157 Gammaproteobacterial periplasmic sensor domain IXK98_RS22220 PF00436 Single-strand binding protein family IXK98_RS22225 PF00196 Bacterial regulatory proteins, luxR family IXK98_RS22225 PF00072 Response regulator receiver domain IXK98_RS22230 PF00483 Nucleotidyl transferase IXK98_RS22235 PF00005 ABC transporter IXK98_RS22235 PF17755 UvrA DNA-binding domain IXK98_RS22235 PF17760 UvrA interaction domain IXK98_RS22245 PF00266 Aminotransferase class-V IXK98_RS22250 PF00696 Amino acid kinase family IXK98_RS22250 PF01842 ACT domain IXK98_RS22255 PF01523 Putative modulator of DNA gyrase IXK98_RS22260 PF04751 Protein of unknown function (DUF615) IXK98_RS22265 PF00005 ABC transporter IXK98_RS22270 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS22280 PF02441 Flavoprotein IXK98_RS22285 PF02875 Mur ligase family, glutamate ligase domain IXK98_RS22285 PF01225 Mur ligase family, catalytic domain IXK98_RS22285 PF08245 Mur ligase middle domain IXK98_RS22290 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain IXK98_RS22300 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like IXK98_RS22305 PF04357 TamB, inner membrane protein subunit of TAM complex IXK98_RS22310 PF01103 Surface antigen IXK98_RS22310 PF07244 Surface antigen variable number repeat IXK98_RS22310 PF17243 POTRA domain TamA domain 1 IXK98_RS22315 PF01625 Peptide methionine sulfoxide reductase IXK98_RS22320 PF00072 Response regulator receiver domain IXK98_RS22325 PF00909 Ammonium Transporter Family IXK98_RS22335 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) IXK98_RS22350 PF00005 ABC transporter IXK98_RS22370 PF00342 Phosphoglucose isomerase IXK98_RS22375 PF01894 Uncharacterised protein family UPF0047 IXK98_RS22390 PF01042 Endoribonuclease L-PSP IXK98_RS22395 PF03313 Serine dehydratase alpha chain IXK98_RS22400 PF08348 YheO-like PAS domain IXK98_RS22400 PF13309 HTH domain IXK98_RS22410 PF00842 Alanine racemase, C-terminal domain IXK98_RS22410 PF01168 Alanine racemase, N-terminal domain IXK98_RS22415 PF00772 DnaB-like helicase N terminal domain IXK98_RS22415 PF03796 DnaB-like helicase C terminal domain IXK98_RS22425 PF01281 Ribosomal protein L9, N-terminal domain IXK98_RS22425 PF03948 Ribosomal protein L9, C-terminal domain IXK98_RS22430 PF01084 Ribosomal protein S18 IXK98_RS22435 PF00436 Single-strand binding protein family IXK98_RS22440 PF01250 Ribosomal protein S6 IXK98_RS22445 PF08019 Phosphoethanolamine transferase EptA/EptB IXK98_RS22445 PF00884 Sulfatase IXK98_RS22450 PF01219 Prokaryotic diacylglycerol kinase IXK98_RS22455 PF00210 Ferritin-like domain IXK98_RS22460 PF04324 BFD-like [2Fe-2S] binding domain IXK98_RS22470 PF03144 Elongation factor Tu domain 2 IXK98_RS22470 PF00009 Elongation factor Tu GTP binding domain IXK98_RS22470 PF14492 Elongation Factor G, domain II IXK98_RS22470 PF00679 Elongation factor G C-terminus IXK98_RS22470 PF03764 Elongation factor G, domain IV IXK98_RS22480 PF00164 Ribosomal protein S12/S23 IXK98_RS22485 PF04077 DsrH like protein IXK98_RS22490 PF02635 DsrE/DsrF-like family IXK98_RS22495 PF02635 DsrE/DsrF-like family IXK98_RS22500 PF08348 YheO-like PAS domain IXK98_RS22500 PF13309 HTH domain IXK98_RS22505 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase IXK98_RS22505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase IXK98_RS22515 PF04102 SlyX IXK98_RS22525 PF01145 SPFH domain / Band 7 family IXK98_RS22530 PF01145 SPFH domain / Band 7 family IXK98_RS22530 PF12221 Bacterial membrane protein N terminal IXK98_RS22535 PF13167 GTP-binding GTPase N-terminal IXK98_RS22535 PF01926 50S ribosome-binding GTPase IXK98_RS22535 PF16360 GTP-binding GTPase Middle Region IXK98_RS22540 PF17209 Hfq protein IXK98_RS22550 PF01119 DNA mismatch repair protein, C-terminal domain IXK98_RS22550 PF08676 MutL C terminal dimerisation domain IXK98_RS22555 PF01520 N-acetylmuramoyl-L-alanine amidase IXK98_RS22560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE IXK98_RS22565 PF08331 Domain of unknown function (DUF1730) IXK98_RS22625 PF00929 Exonuclease IXK98_RS22630 PF03193 RsgA GTPase IXK98_RS22635 PF02666 Phosphatidylserine decarboxylase IXK98_RS22640 PF02080 TrkA-C domain IXK98_RS22640 PF03600 Citrate transporter IXK98_RS22645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS22645 PF02743 Cache domain IXK98_RS22645 PF00672 HAMP domain IXK98_RS22655 PF01676 Metalloenzyme superfamily IXK98_RS22655 PF06415 BPG-independent PGAM N-terminus (iPGM_N) IXK98_RS22670 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS22670 PF08361 MAATS-type transcriptional repressor, C-terminal region IXK98_RS22675 PF01208 Uroporphyrinogen decarboxylase (URO-D) IXK98_RS22680 PF00293 NUDIX domain IXK98_RS22680 PF09297 NADH pyrophosphatase zinc ribbon domain IXK98_RS22685 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ IXK98_RS22690 PF04998 RNA polymerase Rpb1, domain 5 IXK98_RS22690 PF04997 RNA polymerase Rpb1, domain 1 IXK98_RS22690 PF00623 RNA polymerase Rpb1, domain 2 IXK98_RS22690 PF04983 RNA polymerase Rpb1, domain 3 IXK98_RS22690 PF05000 RNA polymerase Rpb1, domain 4 IXK98_RS22695 PF10385 RNA polymerase beta subunit external 1 domain IXK98_RS22695 PF00562 RNA polymerase Rpb2, domain 6 IXK98_RS22695 PF04563 RNA polymerase beta subunit IXK98_RS22695 PF04560 RNA polymerase Rpb2, domain 7 IXK98_RS22695 PF04561 RNA polymerase Rpb2, domain 2 IXK98_RS22695 PF04565 RNA polymerase Rpb2, domain 3 IXK98_RS22700 PF16320 Ribosomal protein L7/L12 dimerisation domain IXK98_RS22700 PF00542 Ribosomal protein L7/L12 C-terminal domain IXK98_RS22705 PF00466 Ribosomal protein L10 IXK98_RS22710 PF00687 Ribosomal protein L1p/L10e family IXK98_RS22715 PF03946 Ribosomal protein L11, N-terminal domain IXK98_RS22715 PF00298 Ribosomal protein L11, RNA binding domain IXK98_RS22720 PF02357 Transcription termination factor nusG IXK98_RS22720 PF00467 KOW motif IXK98_RS22725 PF00584 SecE/Sec61-gamma subunits of protein translocation complex IXK98_RS22730 PF03143 Elongation factor Tu C-terminal domain IXK98_RS22730 PF03144 Elongation factor Tu domain 2 IXK98_RS22730 PF00009 Elongation factor Tu GTP binding domain IXK98_RS22755 PF00485 Phosphoribulokinase / Uridine kinase family IXK98_RS22770 PF00121 Triosephosphate isomerase IXK98_RS22775 PF01554 MatE IXK98_RS22780 PF03737 Aldolase/RraA IXK98_RS22785 PF01040 UbiA prenyltransferase family IXK98_RS22790 PF08207 Elongation factor P (EF-P) KOW-like domain IXK98_RS22790 PF09285 Elongation factor P, C-terminal IXK98_RS22790 PF01132 Elongation factor P (EF-P) OB domain IXK98_RS22795 PF04055 Radical SAM superfamily IXK98_RS22800 PF00114 Pilin (bacterial filament) IXK98_RS22800 PF07963 Prokaryotic N-terminal methylation motif IXK98_RS22805 PF02308 MgtC family IXK98_RS22810 PF03605 Anaerobic c4-dicarboxylate membrane transporter IXK98_RS22815 PF00365 Phosphofructokinase IXK98_RS22820 PF01545 Cation efflux family IXK98_RS22820 PF16916 Dimerisation domain of Zinc Transporter IXK98_RS22825 PF07813 LTXXQ motif family protein IXK98_RS22830 PF00072 Response regulator receiver domain IXK98_RS22830 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS22835 PF00672 HAMP domain IXK98_RS22835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS22835 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS22835 PF16527 Two-component sensor protein CpxA, periplasmic domain IXK98_RS22840 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain IXK98_RS22840 PF02777 Iron/manganese superoxide dismutases, C-terminal domain IXK98_RS22845 PF00588 SpoU rRNA Methylase family IXK98_RS22850 PF00579 tRNA synthetases class I (W and Y) IXK98_RS22855 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS22860 PF00834 Ribulose-phosphate 3 epimerase family IXK98_RS22865 PF02086 D12 class N6 adenine-specific DNA methyltransferase IXK98_RS22875 PF01761 3-dehydroquinate synthase IXK98_RS22880 PF01202 Shikimate kinase IXK98_RS22885 PF00263 Bacterial type II and III secretion system protein IXK98_RS22885 PF03958 Bacterial type II/III secretion system short domain IXK98_RS22885 PF07660 Secretin and TonB N terminus short domain IXK98_RS22885 PF11741 AMIN domain IXK98_RS22905 PF11104 Type IV pilus assembly protein PilM; IXK98_RS22910 PF00905 Penicillin binding protein transpeptidase domain IXK98_RS22910 PF00912 Transglycosylase IXK98_RS22910 PF17092 Penicillin-binding protein OB-like domain IXK98_RS22915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS22915 PF03466 LysR substrate binding domain IXK98_RS22920 PF08534 Redoxin IXK98_RS22920 PF00462 Glutaredoxin IXK98_RS22925 PF01042 Endoribonuclease L-PSP IXK98_RS22935 PF00206 Lyase IXK98_RS22935 PF00583 Acetyltransferase (GNAT) family IXK98_RS22935 PF14698 Argininosuccinate lyase C-terminal IXK98_RS22940 PF00764 Arginosuccinate synthase IXK98_RS22945 PF00696 Amino acid kinase family IXK98_RS22950 PF02774 Semialdehyde dehydrogenase, dimerisation domain IXK98_RS22950 PF01118 Semialdehyde dehydrogenase, NAD binding domain IXK98_RS22955 PF07687 Peptidase dimerisation domain IXK98_RS22955 PF01546 Peptidase family M20/M25/M40 IXK98_RS22960 PF00311 Phosphoenolpyruvate carboxylase IXK98_RS22965 PF10400 Virulence activator alpha C-term IXK98_RS22965 PF03551 Transcriptional regulator PadR-like family IXK98_RS22970 PF06426 Serine acetyltransferase, N-terminal IXK98_RS22970 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS22975 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus IXK98_RS22975 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus IXK98_RS22980 PF02556 Preprotein translocase subunit SecB IXK98_RS22985 PF00581 Rhodanese-like domain IXK98_RS22990 PF00152 tRNA synthetases class II (D, K and N) IXK98_RS22995 PF02910 Fumarate reductase flavoprotein C-term IXK98_RS22995 PF00890 FAD binding domain IXK98_RS23000 PF13183 4Fe-4S dicluster domain IXK98_RS23000 PF13085 2Fe-2S iron-sulfur cluster binding domain IXK98_RS23005 PF02300 Fumarate reductase subunit C IXK98_RS23010 PF02313 Fumarate reductase subunit D IXK98_RS23015 PF02028 BCCT, betaine/carnitine/choline family transporter IXK98_RS23020 PF00004 ATPase family associated with various cellular activities (AAA) IXK98_RS23020 PF07724 AAA domain (Cdc48 subfamily) IXK98_RS23025 PF00227 Proteasome subunit IXK98_RS23030 PF05036 Sporulation related domain IXK98_RS23035 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS23040 PF17764 3′ DNA-binding domain (3′BD) IXK98_RS23040 PF00271 Helicase conserved C-terminal domain IXK98_RS23040 PF18319 PriA DNA helicase Cys-rich region (CRR) domain IXK98_RS23040 PF18074 Primosomal protein N C-terminal domain IXK98_RS23040 PF00270 DEAD/DEAH box helicase IXK98_RS23045 PF01197 Ribosomal protein L31 IXK98_RS23050 PF00390 Malic enzyme, N-terminal domain IXK98_RS23050 PF03949 Malic enzyme, NAD binding domain IXK98_RS23055 PF01340 Met Apo-repressor, MetJ IXK98_RS23060 PF01053 Cys/Met metabolism PLP-dependent enzyme IXK98_RS23065 PF00696 Amino acid kinase family IXK98_RS23065 PF00742 Homoserine dehydrogenase IXK98_RS23065 PF03447 Homoserine dehydrogenase, NAD binding domain IXK98_RS23070 PF02219 Methylenetetrahydrofolate reductase IXK98_RS23075 PF06005 Cell division protein ZapB IXK98_RS23080 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded IXK98_RS23140 PF01177 Asp/Glu/Hydantoin racemase IXK98_RS23150 PF00593 TonB dependent receptor IXK98_RS23150 PF07715 TonB-dependent Receptor Plug Domain IXK98_RS23155 PF05958 tRNA (Uracil-5-)-methyltransferase IXK98_RS23160 PF07226 Protein of unknown function (DUF1422) IXK98_RS23165 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS23170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IXK98_RS23170 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS23175 PF00756 Putative esterase IXK98_RS23180 PF00107 Zinc-binding dehydrogenase IXK98_RS23180 PF08240 Alcohol dehydrogenase GroES-like domain IXK98_RS23185 PF01554 MatE IXK98_RS23195 PF01726 LexA DNA binding domain IXK98_RS23195 PF00717 Peptidase S24-like IXK98_RS23200 PF01219 Prokaryotic diacylglycerol kinase IXK98_RS23205 PF01553 Acyltransferase IXK98_RS23210 PF01040 UbiA prenyltransferase family IXK98_RS23215 PF04345 Chorismate lyase IXK98_RS23220 PF03748 Flagellar basal body-associated protein FliL IXK98_RS23225 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease IXK98_RS23225 PF01694 Rhomboid family IXK98_RS23230 PF00581 Rhodanese-like domain IXK98_RS23235 PF00140 Sigma-70 factor, region 1.2 IXK98_RS23235 PF04542 Sigma-70 region 2 IXK98_RS23235 PF04545 Sigma-70, region 4 IXK98_RS23240 PF18075 FtsX extracellular domain IXK98_RS23245 PF00005 ABC transporter IXK98_RS23250 PF00448 SRP54-type protein, GTPase domain IXK98_RS23250 PF02881 SRP54-type protein, helical bundle domain IXK98_RS23250 PF02881 SRP54-type protein, helical bundle domain IXK98_RS23250 PF00448 SRP54-type protein, GTPase domain IXK98_RS23265 PF01914 MarC family integral membrane protein IXK98_RS23305 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IXK98_RS23305 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IXK98_RS23310 PF01022 Bacterial regulatory protein, arsR family IXK98_RS23315 PF08668 HDOD domain IXK98_RS23315 PF00563 EAL domain IXK98_RS23320 PF01810 LysE type translocator IXK98_RS23325 PF12146 Serine aminopeptidase, S33 IXK98_RS23345 PF03942 DTW domain IXK98_RS23350 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS23350 PF00563 EAL domain IXK98_RS23350 PF08495 FIST N domain IXK98_RS23350 PF10442 FIST C domain IXK98_RS23355 PF13419 Haloacid dehalogenase-like hydrolase IXK98_RS23360 PF02899 Phage integrase, N-terminal SAM-like domain IXK98_RS23360 PF00589 Phage integrase family IXK98_RS23370 PF01678 Diaminopimelate epimerase IXK98_RS23375 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain IXK98_RS23375 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain IXK98_RS23385 PF01491 Frataxin-like domain IXK98_RS23390 PF01295 Adenylate cyclase, class-I IXK98_RS23390 PF12633 Adenylate cyclase NT domain IXK98_RS23395 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain IXK98_RS23395 PF03900 Porphobilinogen deaminase, C-terminal domain IXK98_RS23400 PF02602 Uroporphyrinogen-III synthase HemD IXK98_RS23405 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase IXK98_RS23410 PF07219 HemY protein N-terminus IXK98_RS23475 PF00175 Oxidoreductase NAD-binding domain IXK98_RS23480 PF00970 Oxidoreductase FAD-binding domain IXK98_RS23480 PF00175 Oxidoreductase NAD-binding domain IXK98_RS23480 PF00111 2Fe-2S iron-sulfur cluster binding domain IXK98_RS23485 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase IXK98_RS23495 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain IXK98_RS23495 PF07498 Rho termination factor, N-terminal domain IXK98_RS23495 PF07497 Rho termination factor, RNA-binding domain IXK98_RS23500 PF00085 Thioredoxin IXK98_RS23505 PF00270 DEAD/DEAH box helicase IXK98_RS23505 PF00271 Helicase conserved C-terminal domain IXK98_RS23510 PF02541 Ppx/GppA phosphatase family IXK98_RS23515 PF02592 Putative vitamin uptake transporter IXK98_RS23525 PF00271 Helicase conserved C-terminal domain IXK98_RS23525 PF00270 DEAD/DEAH box helicase IXK98_RS23525 PF16124 RecQ zinc-binding IXK98_RS23525 PF09382 RQC domain IXK98_RS23525 PF00570 HRDC domain IXK98_RS23530 PF00892 EamA-like transporter family IXK98_RS23540 PF01810 LysE type translocator IXK98_RS23550 PF08534 Redoxin IXK98_RS23555 PF00580 UvrD/REP helicase N-terminal domain IXK98_RS23555 PF13361 UvrD-like helicase C-terminal domain IXK98_RS23565 PF05114 Protein of unknown function (DUF692) IXK98_RS23585 PF01432 Peptidase family M3 IXK98_RS23590 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ IXK98_RS23600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain IXK98_RS23600 PF07992 Pyridine nucleotide-disulphide oxidoreductase IXK98_RS23660 PF00072 Response regulator receiver domain IXK98_RS23675 PF12911 N-terminal TM domain of oligopeptide transport permease C IXK98_RS23675 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS23680 PF00528 Binding-protein-dependent transport system inner membrane component IXK98_RS23685 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS23690 PF00005 ABC transporter IXK98_RS23690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region IXK98_RS23720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IXK98_RS23725 PF00580 UvrD/REP helicase N-terminal domain IXK98_RS23725 PF13361 UvrD-like helicase C-terminal domain IXK98_RS23730 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS23735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS23740 PF00873 AcrB/AcrD/AcrF family IXK98_RS23745 PF04380 Membrane fusogenic activity IXK98_RS23750 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain IXK98_RS23750 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain IXK98_RS23755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS23755 PF03466 LysR substrate binding domain IXK98_RS23770 PF04220 Der GTPase activator (YihI) IXK98_RS23780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III IXK98_RS23785 PF01926 50S ribosome-binding GTPase IXK98_RS23790 PF01612 3'-5' exonuclease IXK98_RS23790 PF00476 DNA polymerase family A IXK98_RS23790 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain IXK98_RS23790 PF01367 5'-3' exonuclease, C-terminal SAM fold IXK98_RS23800 PF00490 Delta-aminolevulinic acid dehydratase IXK98_RS23805 PF01026 TatD related DNase IXK98_RS23810 PF00902 Sec-independent protein translocase protein (TatC) IXK98_RS23815 PF02416 mttA/Hcf106 family IXK98_RS23820 PF02416 mttA/Hcf106 family IXK98_RS23825 PF03109 ABC1 family IXK98_RS23830 PF02036 SCP-2 sterol transfer family IXK98_RS23835 PF01209 ubiE/COQ5 methyltransferase family IXK98_RS23840 PF02646 RmuC family IXK98_RS23850 PF08668 HDOD domain IXK98_RS23855 PF12833 Helix-turn-helix domain IXK98_RS23855 PF12852 Cupin IXK98_RS23870 PF10625 Universal stress protein B (UspB) IXK98_RS23875 PF00210 Ferritin-like domain IXK98_RS23880 PF00582 Universal stress protein family IXK98_RS23885 PF00892 EamA-like transporter family IXK98_RS23895 PF04445 Putative SAM-dependent methyltransferase IXK98_RS23900 PF08448 PAS fold IXK98_RS23900 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS23900 PF00563 EAL domain IXK98_RS23905 PF01037 Lrp/AsnC ligand binding domain IXK98_RS23905 PF13404 AsnC-type helix-turn-helix domain IXK98_RS23915 PF07690 Major Facilitator Superfamily IXK98_RS23920 PF03466 LysR substrate binding domain IXK98_RS23920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS23925 PF01321 Creatinase/Prolidase N-terminal domain IXK98_RS23925 PF00557 Metallopeptidase family M24 IXK98_RS23925 PF01321 Creatinase/Prolidase N-terminal domain IXK98_RS23925 PF00557 Metallopeptidase family M24 IXK98_RS23930 PF06968 Biotin and Thiamin Synthesis associated domain IXK98_RS23930 PF04055 Radical SAM superfamily IXK98_RS23935 PF05690 Thiazole biosynthesis protein ThiG IXK98_RS23940 PF02597 ThiS family IXK98_RS23945 PF00899 ThiF family IXK98_RS23950 PF02581 Thiamine monophosphate synthase IXK98_RS23955 PF13667 ThiC-associated domain IXK98_RS23955 PF01964 Radical SAM ThiC family IXK98_RS23960 PF02537 CrcB-like protein, Camphor Resistance (CrcB) IXK98_RS23965 PF00394 Multicopper oxidase IXK98_RS23965 PF07731 Multicopper oxidase IXK98_RS23965 PF07732 Multicopper oxidase IXK98_RS24025 PF00975 Thioesterase domain IXK98_RS24040 PF02615 Malate/L-lactate dehydrogenase IXK98_RS24045 PF00155 Aminotransferase class I and II IXK98_RS24055 PF05721 Phytanoyl-CoA dioxygenase (PhyH) IXK98_RS24065 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS24065 PF00975 Thioesterase domain IXK98_RS24065 PF00668 Condensation domain IXK98_RS24065 PF00550 Phosphopantetheine attachment site IXK98_RS24065 PF00501 AMP-binding enzyme IXK98_RS24070 PF00668 Condensation domain IXK98_RS24070 PF00668 Condensation domain IXK98_RS24070 PF00550 Phosphopantetheine attachment site IXK98_RS24070 PF00501 AMP-binding enzyme IXK98_RS24070 PF00501 AMP-binding enzyme IXK98_RS24070 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS24070 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS24070 PF00550 Phosphopantetheine attachment site IXK98_RS24075 PF00550 Phosphopantetheine attachment site IXK98_RS24075 PF07993 Male sterility protein IXK98_RS24075 PF00668 Condensation domain IXK98_RS24075 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS24075 PF00501 AMP-binding enzyme IXK98_RS24075 PF00550 Phosphopantetheine attachment site IXK98_RS24075 PF00668 Condensation domain IXK98_RS24075 PF13193 AMP-binding enzyme C-terminal domain IXK98_RS24075 PF00501 AMP-binding enzyme IXK98_RS24075 PF07993 Male sterility protein IXK98_RS24080 PF01804 Penicillin amidase IXK98_RS24085 PF00005 ABC transporter IXK98_RS24085 PF00664 ABC transporter transmembrane region IXK98_RS24090 PF01507 Phosphoadenosine phosphosulfate reductase family IXK98_RS24095 PF00009 Elongation factor Tu GTP binding domain IXK98_RS24100 PF02080 TrkA-C domain IXK98_RS24100 PF03600 Citrate transporter IXK98_RS24110 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS24110 PF00563 EAL domain IXK98_RS24110 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS24125 PF08240 Alcohol dehydrogenase GroES-like domain IXK98_RS24125 PF00107 Zinc-binding dehydrogenase IXK98_RS24130 PF07687 Peptidase dimerisation domain IXK98_RS24130 PF01546 Peptidase family M20/M25/M40 IXK98_RS24140 PF08534 Redoxin IXK98_RS24145 PF08534 Redoxin IXK98_RS24165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS24165 PF03466 LysR substrate binding domain IXK98_RS24225 PF01966 HD domain IXK98_RS24280 PF00664 ABC transporter transmembrane region IXK98_RS24280 PF00005 ABC transporter IXK98_RS24285 PF01810 LysE type translocator IXK98_RS24295 PF01810 LysE type translocator IXK98_RS24315 PF02899 Phage integrase, N-terminal SAM-like domain IXK98_RS24315 PF00589 Phage integrase family IXK98_RS24330 PF08534 Redoxin IXK98_RS24350 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS24385 PF04717 Type VI secretion system, phage-baseplate injector IXK98_RS24395 PF00069 Protein kinase domain IXK98_RS24410 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IXK98_RS24420 PF16697 Inner membrane component of T3SS, cytoplasmic domain IXK98_RS24440 PF07478 D-ala D-ala ligase C-terminus IXK98_RS24440 PF01820 D-ala D-ala ligase N-terminus IXK98_RS24445 PF10431 C-terminal, D2-small domain, of ClpB protein IXK98_RS24445 PF07724 AAA domain (Cdc48 subfamily) IXK98_RS24445 PF00004 ATPase family associated with various cellular activities (AAA) IXK98_RS24445 PF17871 AAA lid domain IXK98_RS24470 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath IXK98_RS24505 PF03222 Tryptophan/tyrosine permease family IXK98_RS24520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle IXK98_RS24525 PF01161 Phosphatidylethanolamine-binding protein IXK98_RS24530 PF00724 NADH:flavin oxidoreductase / NADH oxidase family IXK98_RS24560 PF01212 Beta-eliminating lyase IXK98_RS24575 PF07690 Major Facilitator Superfamily IXK98_RS24580 PF08775 ParB family IXK98_RS24580 PF02195 ParB-like nuclease domain IXK98_RS24585 PF13614 AAA domain IXK98_RS24620 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS24620 PF00072 Response regulator receiver domain IXK98_RS24630 PF01627 Hpt domain IXK98_RS24630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) IXK98_RS24630 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS24630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS24630 PF00672 HAMP domain IXK98_RS24630 PF00072 Response regulator receiver domain IXK98_RS24640 PF13840 ACT domain IXK98_RS24640 PF00696 Amino acid kinase family IXK98_RS24645 PF01590 GAF domain IXK98_RS24645 PF00563 EAL domain IXK98_RS24645 PF00360 Phytochrome region IXK98_RS24645 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS24650 PF18030 RimK PreATP-grasp domain IXK98_RS24650 PF08443 RimK-like ATP-grasp domain IXK98_RS24660 PF18030 RimK PreATP-grasp domain IXK98_RS24660 PF08443 RimK-like ATP-grasp domain IXK98_RS24665 PF03448 MgtE intracellular N domain IXK98_RS24665 PF00571 CBS domain IXK98_RS24665 PF01769 Divalent cation transporter IXK98_RS24670 PF01544 CorA-like Mg2+ transporter protein IXK98_RS24695 PF02743 Cache domain IXK98_RS24695 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS24695 PF00672 HAMP domain IXK98_RS24710 PF03466 LysR substrate binding domain IXK98_RS24710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS24715 PF01168 Alanine racemase, N-terminal domain IXK98_RS24715 PF14031 Putative serine dehydratase domain IXK98_RS24720 PF02423 Ornithine cyclodeaminase/mu-crystallin family IXK98_RS24745 PF00155 Aminotransferase class I and II IXK98_RS24755 PF00464 Serine hydroxymethyltransferase IXK98_RS24765 PF06271 RDD family IXK98_RS24770 PF13087 AAA domain IXK98_RS24770 PF13086 AAA domain IXK98_RS24770 PF13195 Protein of unknown function (DUF4011) IXK98_RS24770 PF13087 AAA domain IXK98_RS24770 PF13195 Protein of unknown function (DUF4011) IXK98_RS24770 PF13086 AAA domain IXK98_RS24840 PF02384 N-6 DNA Methylase IXK98_RS24845 PF01420 Type I restriction modification DNA specificity domain IXK98_RS24855 PF18766 SWI2/SNF2 ATPase IXK98_RS24855 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) IXK98_RS24855 PF11867 Domain of unknown function (DUF3387) IXK98_RS24885 PF02694 Uncharacterised BCR, YnfA/UPF0060 family IXK98_RS24900 PF01575 MaoC like domain IXK98_RS24940 PF04002 RadC-like JAB domain IXK98_RS24955 PF02311 AraC-like ligand binding domain IXK98_RS24955 PF12833 Helix-turn-helix domain IXK98_RS24960 PF03412 Peptidase C39 family IXK98_RS24960 PF00664 ABC transporter transmembrane region IXK98_RS24960 PF00005 ABC transporter IXK98_RS25000 PF18500 CadC C-terminal domain 1 IXK98_RS25000 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS25015 PF03466 LysR substrate binding domain IXK98_RS25015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS25030 PF06123 Inner membrane protein CreD IXK98_RS25035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IXK98_RS25035 PF00672 HAMP domain IXK98_RS25035 PF00512 His Kinase A (phospho-acceptor) domain IXK98_RS25040 PF00486 Transcriptional regulatory protein, C terminal IXK98_RS25040 PF00072 Response regulator receiver domain IXK98_RS25085 PF01037 Lrp/AsnC ligand binding domain IXK98_RS25100 PF00664 ABC transporter transmembrane region IXK98_RS25100 PF00005 ABC transporter IXK98_RS25105 PF00529 HlyD membrane-fusion protein of T1SS IXK98_RS25115 PF02743 Cache domain IXK98_RS25115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain IXK98_RS25115 PF00672 HAMP domain IXK98_RS25135 PF00440 Bacterial regulatory proteins, tetR family IXK98_RS25145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS25145 PF03466 LysR substrate binding domain IXK98_RS25160 PF00892 EamA-like transporter family IXK98_RS25165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IXK98_RS25165 PF03466 LysR substrate binding domain IXK98_RS25170 PF00589 Phage integrase family IXK98_RS25170 PF02899 Phage integrase, N-terminal SAM-like domain IXK98_RS25180 PF01168 Alanine racemase, N-terminal domain IXK98_RS25200 PF00166 Chaperonin 10 Kd subunit IXK98_RS25205 PF00118 TCP-1/cpn60 chaperonin family IXK98_RS25210 PF00011 Hsp20/alpha crystallin family IXK98_RS25215 PF00011 Hsp20/alpha crystallin family IXK98_RS25225 PF00923 Transaldolase/Fructose-6-phosphate aldolase IXK98_RS25230 PF04055 Radical SAM superfamily IXK98_RS25235 PF01228 Glycine radical IXK98_RS25235 PF02901 Pyruvate formate lyase-like IXK98_RS25240 PF00455 DeoR C terminal sensor domain IXK98_RS25240 PF08220 DeoR-like helix-turn-helix domain IXK98_RS25250 PF00107 Zinc-binding dehydrogenase IXK98_RS25250 PF08240 Alcohol dehydrogenase GroES-like domain IXK98_RS25260 PF01638 HxlR-like helix-turn-helix IXK98_RS25280 PF07237 Protein of unknown function (DUF1428) IXK98_RS25285 PF00356 Bacterial regulatory proteins, lacI family IXK98_RS25300 PF07690 Major Facilitator Superfamily IXK98_RS25305 PF00474 Sodium:solute symporter family IXK98_RS25310 PF03315 Serine dehydratase beta chain IXK98_RS25310 PF03313 Serine dehydratase alpha chain IXK98_RS25325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion IXK98_RS25325 PF00529 HlyD membrane-fusion protein of T1SS IXK98_RS25335 PF04973 Nicotinamide mononucleotide transporter IXK98_RS25340 PF01048 Phosphorylase superfamily IXK98_RS25350 PF01042 Endoribonuclease L-PSP IXK98_RS25365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain IXK98_RS25365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold IXK98_RS25380 PF12919 TcdA/TcdB catalytic glycosyltransferase domain IXK98_RS25380 PF12920 TcdA/TcdB pore forming domain IXK98_RS25380 PF12918 TcdB toxin N-terminal helical domain IXK98_RS25380 PF01473 Putative cell wall binding repeat IXK98_RS25380 PF11713 Peptidase C80 family IXK98_RS25400 PF03412 Peptidase C39 family IXK98_RS25400 PF00005 ABC transporter IXK98_RS25400 PF00664 ABC transporter transmembrane region IXK98_RS25405 PF01032 FecCD transport family IXK98_RS25415 PF00005 ABC transporter IXK98_RS25435 PF00132 Bacterial transferase hexapeptide (six repeats) IXK98_RS25440 PF00563 EAL domain IXK98_RS25440 PF00990 Diguanylate cyclase, GGDEF domain IXK98_RS25440 PF03707 Bacterial signalling protein N terminal repeat IXK98_RS25450 PF08751 TrwC relaxase IXK98_RS25450 PF18340 DNA relaxase TraI 2B/2B-like domain IXK98_RS25450 PF07057 DNA helicase TraI IXK98_RS25450 PF18272 single-stranded DNA binding TraI N-terminal subdomain IXK98_RS25455 PF12615 F sex factor protein N terminal IXK98_RS25455 PF10412 Type IV secretion-system coupling protein DNA-binding domain IXK98_RS25490 PF06986 Type-1V conjugative transfer system mating pair stabilisation IXK98_RS25500 PF06834 TraU protein IXK98_RS25510 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer IXK98_RS25550 PF07676 WD40-like Beta Propeller Repeat IXK98_RS25550 PF03572 Peptidase family S41 IXK98_RS25550 PF14684 Tricorn protease C1 domain IXK98_RS25550 PF14685 Tricorn protease PDZ domain IXK98_RS25575 PF00107 Zinc-binding dehydrogenase IXK98_RS25575 PF08240 Alcohol dehydrogenase GroES-like domain IXK98_RS25585 PF00291 Pyridoxal-phosphate dependent enzyme IXK98_RS25625 PF07516 SecA Wing and Scaffold domain IXK98_RS25625 PF02810 SEC-C motif IXK98_RS25625 PF07517 SecA DEAD-like domain IXK98_RS25625 PF01043 SecA preprotein cross-linking domain IXK98_RS25700 PF05016 ParE toxin of type II toxin-antitoxin system, parDE