VF_0001 IPR008254 Flavodoxin/nitric oxide synthase VF_0001 IPR029039 Flavoprotein-like VF_0002 IPR004520 tRNA modification GTPase MnmE VF_0002 IPR005225 Small GTP-binding protein domain VF_0002 IPR006073 GTP binding domain VF_0002 IPR018948 GTP-binding protein TrmE, N-terminal VF_0002 IPR025867 tRNA modification GTPase MnmE C-terminal domain VF_0002 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 VF_0002 IPR027368 tRNA modification GTPase MnmE domain 2 VF_0002 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0003 IPR001708 Membrane insertase OXA1/ALB3/YidC VF_0003 IPR019998 Membrane insertase YidC VF_0003 IPR028053 Membrane insertase YidC, N-terminal VF_0003 IPR028055 Membrane insertase YidC/Oxa1, C-terminal VF_0004 IPR000100 Ribonuclease P VF_0004 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_0004 IPR020539 Ribonuclease P, conserved site VF_0004 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0005 IPR000271 Ribosomal protein L34 VF_0005 IPR020939 Ribosomal protein L34, conserved site VF_0006 IPR003439 ABC transporter-like VF_0006 IPR003593 AAA+ ATPase domain VF_0006 IPR017871 ABC transporter, conserved site VF_0006 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0006 IPR030679 VF_0006 VF_0007 IPR000515 MetI-like domain VF_0007 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VF_0008 IPR001320 Ionotropic glutamate receptor VF_0008 IPR001638 Extracellular solute-binding protein, family 3 VF_0009 IPR001957 Chromosomal replication control, initiator DnaA VF_0009 IPR003593 AAA+ ATPase domain VF_0009 IPR010921 Trp repressor/replication initiator VF_0009 IPR013159 Chromosomal replication initiator, DnaA C-terminal VF_0009 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) VF_0009 IPR018312 Chromosomal replication control, initiator DnaA, conserved site VF_0009 IPR020591 Chromosomal replication control, initiator DnaA-like VF_0009 IPR024633 DnaA N-terminal domain VF_0009 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0010 IPR001001 DNA polymerase III, beta chain VF_0010 IPR022634 DNA polymerase III, beta chain, N-terminal VF_0010 IPR022635 DNA polymerase III, beta chain, C-terminal VF_0010 IPR022637 DNA polymerase III, beta chain, central VF_0011 IPR001238 DNA-binding, RecF VF_0011 IPR003395 RecF/RecN/SMC, N-terminal VF_0011 IPR018078 DNA-binding, RecF, conserved site VF_0011 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0012 IPR000565 DNA topoisomerase, type IIA, subunit B VF_0012 IPR001241 DNA topoisomerase, type IIA VF_0012 IPR002288 DNA gyrase B subunit, C-terminal VF_0012 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_0012 IPR006171 Toprim domain VF_0012 IPR011557 DNA gyrase, subunit B VF_0012 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VF_0012 IPR013759 DNA topoisomerase, type IIA, central domain VF_0012 IPR013760 DNA topoisomerase, type IIA-like domain VF_0012 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_0012 IPR018522 DNA topoisomerase, type IIA, conserved site VF_0012 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0013 IPR002068 Alpha crystallin/Hsp20 domain VF_0013 IPR008978 HSP20-like chaperone VF_0013 IPR031107 VF_0013 VF_0014 IPR004839 Aminotransferase, class I/classII VF_0014 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_0014 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_0014 IPR015424 Pyridoxal phosphate-dependent transferase VF_0015 IPR002310 Glycine-tRNA ligase, alpha subunit VF_0016 IPR008909 DALR anticodon binding VF_0016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VF_0016 IPR015944 Glycine-tRNA ligase, beta subunit VF_0017 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VF_0017 IPR013781 Glycoside hydrolase, catalytic domain VF_0017 IPR015902 Glycoside hydrolase, family 13 VF_0017 IPR017853 Glycoside hydrolase, superfamily VF_0019 IPR001455 TusA-like domain VF_0019 IPR022931 Sulphurtransferase TusA VF_0021 IPR000847 Transcription regulator HTH, LysR VF_0021 IPR005119 LysR, substrate-binding VF_0021 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0022 IPR008024 YiaAB two helix VF_0023 IPR002085 Alcohol dehydrogenase superfamily, zinc-type VF_0023 IPR011032 GroES (chaperonin 10)-like VF_0023 IPR013149 Alcohol dehydrogenase, C-terminal VF_0023 IPR013154 Alcohol dehydrogenase GroES-like VF_0023 IPR014188 Acrylyl-CoA reductase AcuI VF_0023 IPR016040 NAD(P)-binding domain VF_0023 IPR020843 Polyketide synthase, enoylreductase VF_0024 IPR002155 Thiolase VF_0024 IPR012805 Acetyl-CoA C-acyltransferase FadA VF_0024 IPR016039 Thiolase-like VF_0024 IPR020610 Thiolase, active site VF_0024 IPR020613 Thiolase, conserved site VF_0024 IPR020615 Thiolase, acyl-enzyme intermediate active site VF_0024 IPR020616 Thiolase, N-terminal VF_0024 IPR020617 Thiolase, C-terminal VF_0025 IPR001753 Crotonase superfamily VF_0025 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VF_0025 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VF_0025 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VF_0025 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VF_0025 IPR012799 Fatty oxidation complex, alpha subunit FadB VF_0025 IPR013328 Dehydrogenase, multihelical VF_0025 IPR016040 NAD(P)-binding domain VF_0025 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VF_0025 IPR029045 ClpP/crotonase-like domain VF_0026 IPR000640 Translation elongation factor EFG, V domain VF_0026 IPR001498 Impact, N-terminal VF_0026 IPR009022 Elongation factor G, III-V domain VF_0026 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VF_0026 IPR015796 Impact family, bacterial/archaeal VF_0026 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0026 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VF_0026 IPR023582 Impact family VF_0027 IPR003445 Cation transporter VF_0027 IPR004772 Potassium uptake protein TrkH family VF_0028 IPR026816 Flavodoxin domain VF_0028 IPR029039 Flavoprotein-like VF_0029 IPR001431 Peptidase M16, zinc-binding site VF_0029 IPR007863 Peptidase M16, C-terminal domain VF_0029 IPR011237 Peptidase M16 domain VF_0029 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VF_0029 IPR011765 Peptidase M16, N-terminal VF_0031 IPR001807 Chloride channel, voltage gated VF_0031 IPR014743 Chloride channel, core VF_0032 IPR002817 Thiamine biosynthesis protein ThiC VF_0032 IPR025747 ThiC-associated domain VF_0033 IPR003733 Thiamine phosphate synthase VF_0033 IPR013785 Aldolase-type TIM barrel VF_0033 IPR022998 Thiamin phosphate synthase superfamily VF_0034 IPR000594 UBA/THIF-type NAD/FAD binding fold VF_0034 IPR016040 NAD(P)-binding domain VF_0035 IPR008867 Thiazole biosynthesis VF_0035 IPR013785 Aldolase-type TIM barrel VF_0036 IPR007197 Radical SAM VF_0036 IPR010722 Biotin and thiamin synthesis-associated domain VF_0036 IPR012726 Thiazole biosynthesis ThiH VF_0036 IPR013785 Aldolase-type TIM barrel VF_0037 IPR013781 Glycoside hydrolase, catalytic domain VF_0037 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal VF_0037 IPR015883 Glycoside hydrolase family 20, catalytic core VF_0037 IPR017853 Glycoside hydrolase, superfamily VF_0037 IPR025705 Beta-hexosaminidase VF_0037 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VF_0038 IPR000587 Creatinase, N-terminal VF_0038 IPR000994 Peptidase M24, structural domain VF_0038 IPR028980 Creatinase/Aminopeptidase P, N-terminal VF_0038 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VF_0038 IPR032416 VF_0038 VF_0040 IPR000847 Transcription regulator HTH, LysR VF_0040 IPR005119 LysR, substrate-binding VF_0040 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0041 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VF_0041 IPR005829 Sugar transporter, conserved site VF_0041 IPR011701 Major facilitator superfamily VF_0041 IPR020846 Major facilitator superfamily domain VF_0042 IPR027454 Histone-like protein H-NS family, oligomerisation domain VF_0043 IPR000620 Drug/metabolite transporter VF_0044 IPR003798 DNA recombination RmuC VF_0046 IPR004033 UbiE/COQ5 methyltransferase VF_0046 IPR023576 UbiE/COQ5 methyltransferase, conserved site VF_0046 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0047 IPR003033 SCP2 sterol-binding domain VF_0048 IPR004147 UbiB domain VF_0048 IPR010232 Probable protein kinase UbiB VF_0048 IPR011009 Protein kinase-like domain VF_0049 IPR003369 Sec-independent protein translocase protein TatA/B/E VF_0049 IPR006312 Sec-independent protein translocase protein TatA/E VF_0050 IPR003369 Sec-independent protein translocase protein TatA/B/E VF_0050 IPR003998 Twin-arginine translocation protein TatB-like VF_0050 IPR018448 Twin-arginine translocation protein TatB VF_0051 IPR002033 Sec-independent periplasmic protein translocase TatC VF_0051 IPR019820 Sec-independent periplasmic protein translocase, conserved site VF_0052 IPR001130 TatD family VF_0052 IPR015991 Uncharacterised deoxyribonuclease TatD-type VF_0052 IPR032466 VF_0052 VF_0053 IPR001731 Porphobilinogen synthase VF_0053 IPR013785 Aldolase-type TIM barrel VF_0053 IPR030656 VF_0053 VF_0054 IPR003695 Ppx/GppA phosphatase VF_0054 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase VF_0054 IPR030673 VF_0054 VF_0056 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VF_0056 IPR001650 Helicase, C-terminal VF_0056 IPR011545 DEAD/DEAH box helicase domain VF_0056 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_0056 IPR023554 RNA helicase, ATP-dependent, RhlB-type VF_0056 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0057 IPR005746 Thioredoxin VF_0057 IPR012336 Thioredoxin-like fold VF_0057 IPR013766 Thioredoxin domain VF_0057 IPR017937 Thioredoxin, conserved site VF_0058 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VF_0058 IPR003593 AAA+ ATPase domain VF_0058 IPR004665 Transcription termination factor Rho VF_0058 IPR011112 Rho termination factor, N-terminal VF_0058 IPR011113 Rho termination factor, RNA-binding VF_0058 IPR011129 Cold shock protein VF_0058 IPR012340 Nucleic acid-binding, OB-fold VF_0058 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0060 IPR002830 UbiD decarboxylyase family VF_0060 IPR012349 FMN-binding split barrel VF_0061 IPR001041 2Fe-2S ferredoxin-type domain VF_0061 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VF_0061 IPR012675 Beta-grasp domain VF_0062 IPR001221 Phenol hydroxylase reductase VF_0062 IPR001433 Oxidoreductase FAD/NAD(P)-binding VF_0062 IPR008333 Oxidoreductase, FAD-binding domain VF_0062 IPR017938 Riboflavin synthase-like beta-barrel VF_0063 IPR005254 Heme biosynthesis-associated TPR protein VF_0063 IPR010817 HemY, N-terminal VF_0063 IPR011990 Tetratricopeptide-like helical domain VF_0064 IPR007470 HemX VF_0065 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase VF_0066 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase VF_0066 IPR022417 Porphobilinogen deaminase, N-terminal VF_0066 IPR022418 Porphobilinogen deaminase, C-terminal VF_0066 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site VF_0067 IPR000274 Adenylate cyclase, class-I VF_0067 IPR024685 Adenylate cyclase class-I, N-terminal domain VF_0067 IPR024686 Adenylate cyclase class-I, conserved site VF_0068 IPR000212 DNA helicase, UvrD/REP type VF_0068 IPR005753 DNA helicase, ATP-dependent, UvrD type VF_0068 IPR013986 DExx box DNA helicase domain VF_0068 IPR014016 UvrD-like Helicase, ATP-binding domain VF_0068 IPR014017 DNA helicase, UvrD-like, C-terminal VF_0068 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0069 IPR000620 Drug/metabolite transporter VF_0069 IPR004626 RarD protein VF_0070 IPR001650 Helicase, C-terminal VF_0070 IPR002121 HRDC domain VF_0070 IPR004589 DNA helicase, ATP-dependent, RecQ type VF_0070 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial VF_0070 IPR010997 HRDC-like VF_0070 IPR011545 DEAD/DEAH box helicase domain VF_0070 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0070 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_0070 IPR018982 RQC domain VF_0070 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0070 IPR032284 VF_0070 VF_0071 IPR022080 Protein of unknown function DUF3630 VF_0072 IPR000849 Sugar phosphate transporter VF_0072 IPR005267 Glycerol-3-phosphate transporter VF_0072 IPR011701 Major facilitator superfamily VF_0072 IPR020846 Major facilitator superfamily domain VF_0072 IPR021159 Glycerate/sugar phosphate transporter, conserved site VF_0073 IPR003744 Protein of unknown function DUF165 VF_0074 IPR001098 DNA-directed DNA polymerase, family A, palm domain VF_0074 IPR002298 DNA polymerase A VF_0074 IPR002421 5'-3' exonuclease, N-terminal VF_0074 IPR002562 3'-5' exonuclease domain VF_0074 IPR008918 Helix-hairpin-helix motif, class 2 VF_0074 IPR012337 Ribonuclease H-like domain VF_0074 IPR018320 DNA polymerase 1 VF_0074 IPR019760 DNA-directed DNA polymerase, family A, conserved site VF_0074 IPR020045 5'-3' exonuclease, C-terminal domain VF_0074 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VF_0074 IPR029060 PIN domain-like VF_0075 IPR006073 GTP binding domain VF_0075 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC VF_0075 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0076 IPR009056 Cytochrome c-like domain VF_0076 IPR024167 Cytochrome c4 VF_0077 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0078 IPR007336 Der GTPase activator VF_0079 IPR019617 Domain of unknown function DUF2489 VF_0080 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN VF_0080 IPR006638 Elongator protein 3/MiaB/NifB VF_0080 IPR007197 Radical SAM VF_0080 IPR010723 HemN, C-terminal domain VF_0080 IPR023404 Radical SAM, alpha/beta horseshoe VF_0081 IPR000485 AsnC-type HTH domain VF_0081 IPR011008 Dimeric alpha-beta barrel VF_0081 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0081 IPR019887 Transcription regulator AsnC-type, C-terminal VF_0081 IPR019888 Transcription regulator AsnC-type VF_0082 IPR007536 Ribosomal RNA small subunit methyltransferase J VF_0082 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0083 IPR006015 Universal stress protein A VF_0083 IPR006016 UspA VF_0083 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0084 IPR001519 Ferritin VF_0084 IPR008331 Ferritin/DPS protein domain VF_0084 IPR009078 Ferritin-like superfamily VF_0084 IPR012347 Ferritin-related VF_0085 IPR019598 Universal stress protein B VF_0086 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VF_0086 IPR023166 HI0933 insert-like domain VF_0086 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_0087 IPR000160 GGDEF domain VF_0087 IPR001633 EAL domain VF_0087 IPR013702 FIST domain, N-terminal VF_0087 IPR019494 FIST C domain VF_0087 IPR029787 Nucleotide cyclase VF_0088 IPR005636 DTW VF_0090 IPR000887 KDPG/KHG aldolase VF_0090 IPR013785 Aldolase-type TIM barrel VF_0090 IPR031337 VF_0090 VF_0090 IPR031338 VF_0090 VF_0091 IPR000160 GGDEF domain VF_0091 IPR001633 EAL domain VF_0091 IPR003660 HAMP linker domain VF_0091 IPR029787 Nucleotide cyclase VF_0091 IPR033479 VF_0091 VF_0093 IPR001365 Adenosine/AMP deaminase domain VF_0093 IPR006330 Adenosine/adenine deaminase VF_0093 IPR028893 Adenosine deaminase VF_0093 IPR032466 VF_0093 VF_0094 IPR000160 GGDEF domain VF_0094 IPR001633 EAL domain VF_0094 IPR003660 HAMP linker domain VF_0094 IPR029787 Nucleotide cyclase VF_0094 IPR033479 VF_0094 VF_0095 IPR001789 Signal transduction response regulator, receiver domain VF_0095 IPR002078 RNA polymerase sigma factor 54 interaction domain VF_0095 IPR002197 DNA binding HTH domain, Fis-type VF_0095 IPR003593 AAA+ ATPase domain VF_0095 IPR009057 Homeodomain-like VF_0095 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) VF_0095 IPR011006 CheY-like superfamily VF_0095 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VF_0095 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VF_0095 IPR025944 Sigma-54 interaction domain, conserved site VF_0095 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0096 IPR000014 PAS domain VF_0096 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_0096 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_0096 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_0096 IPR013767 PAS fold VF_0097 IPR025392 Domain of unknown function DUF4124 VF_0098 IPR001637 Glutamine synthetase class-I, adenylation site VF_0098 IPR004809 Glutamine synthetase type I VF_0098 IPR008146 Glutamine synthetase, catalytic domain VF_0098 IPR008147 Glutamine synthetase, beta-Grasp VF_0098 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain VF_0098 IPR027302 Glutamine synthetase, N-terminal conserved site VF_0098 IPR027303 Glutamine synthetase, glycine-rich site VF_0099 IPR000640 Translation elongation factor EFG, V domain VF_0099 IPR000795 Elongation factor, GTP-binding domain VF_0099 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VF_0099 IPR005225 Small GTP-binding protein domain VF_0099 IPR006298 GTP-binding protein TypA VF_0099 IPR009000 Translation protein, beta-barrel domain VF_0099 IPR009022 Elongation factor G, III-V domain VF_0099 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0099 IPR031157 VF_0099 VF_0100 IPR017039 Virulence factor BrkB VF_0100 IPR023679 Uncharacterised protein family UPF0761, bacterial VF_0101 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase VF_0101 IPR023509 D-Tyr tRNAtyr deacylase-like domain VF_0102 IPR000182 GNAT domain VF_0102 IPR012660 Thioesterase, putative VF_0102 IPR016181 Acyl-CoA N-acyltransferase VF_0102 IPR029069 HotDog domain VF_0103 IPR001537 tRNA/rRNA methyltransferase, SpoU type VF_0103 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal VF_0103 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VF_0103 IPR029028 Alpha/beta knot methyltransferases VF_0104 IPR002912 ACT domain VF_0104 IPR003607 HD/PDEase domain VF_0104 IPR004095 TGS VF_0104 IPR004811 RelA/SpoT family VF_0104 IPR007685 RelA/SpoT VF_0104 IPR012675 Beta-grasp domain VF_0104 IPR012676 TGS-like VF_0105 IPR003716 DNA-directed RNA polymerase, omega subunit VF_0105 IPR006110 RNA polymerase, subunit omega/K/RPB6 VF_0105 IPR012293 RNA polymerase subunit, RPB6/omega VF_0106 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VF_0106 IPR017665 Guanylate kinase VF_0106 IPR020590 Guanylate kinase, conserved site VF_0106 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0107 IPR009315 Phosphate-starvation-induced PsiE VF_0107 IPR020948 Phosphate-starvation-induced PsiE-like VF_0109 IPR000620 Drug/metabolite transporter VF_0110 IPR005229 Conserved hypothetical protein CHP00255 VF_0110 IPR013527 YicC-like, N-terminal VF_0110 IPR013551 Domain of unknown function DUF1732 VF_0111 IPR001247 Exoribonuclease, phosphorolytic domain 1 VF_0111 IPR002381 Ribonuclease phosphorolytic, bacterial-type VF_0111 IPR015847 Exoribonuclease, phosphorolytic domain 2 VF_0111 IPR018336 Ribonuclease PH, conserved site VF_0111 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0111 IPR027408 PNPase/RNase PH domain VF_0112 IPR000836 Phosphoribosyltransferase domain VF_0112 IPR004467 Orotate phosphoribosyl transferase domain VF_0112 IPR023031 Orotate phosphoribosyltransferase VF_0112 IPR029057 Phosphoribosyltransferase-like VF_0113 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VF_0113 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0114 IPR001789 Signal transduction response regulator, receiver domain VF_0114 IPR001867 Signal transduction response regulator, C-terminal VF_0114 IPR011006 CheY-like superfamily VF_0114 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0114 IPR016032 Signal transduction response regulator, C-terminal effector VF_0115 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_0115 IPR003660 HAMP linker domain VF_0115 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_0115 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_0116 IPR006042 Xanthine/uracil permease VF_0116 IPR006043 Xanthine/uracil/vitamin C permease VF_0116 IPR017588 Xanthine permease VF_0117 IPR000836 Phosphoribosyltransferase domain VF_0117 IPR029057 Phosphoribosyltransferase-like VF_0118 IPR000073 Alpha/beta hydrolase fold-1 VF_0118 IPR010076 Pimelyl-[acyl-carrier protein] methyl ester esterase VF_0118 IPR029058 Alpha/Beta hydrolase fold VF_0120 IPR003029 Ribosomal protein S1, RNA-binding domain VF_0120 IPR006641 YqgF/RNase H-like domain VF_0120 IPR010994 RuvA domain 2-like VF_0120 IPR012337 Ribonuclease H-like domain VF_0120 IPR012340 Nucleic acid-binding, OB-fold VF_0120 IPR018974 Tex-like protein, N-terminal VF_0120 IPR022967 RNA-binding domain, S1 VF_0120 IPR023097 Tex RuvX-like domain VF_0120 IPR023319 Tex-like protein, HTH domain VF_0120 IPR023323 Tex-like domain VF_0120 IPR032639 VF_0120 VF_0121 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VF_0121 IPR006358 Transcription elongation factor GreB VF_0121 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VF_0121 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VF_0121 IPR023459 Transcription elongation factor GreA/GreB family VF_0121 IPR028624 Transcription elongation factor GreA/GreB VF_0122 IPR004960 Bacterial lipid A biosynthesis acyltransferase VF_0122 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase VF_0124 IPR001647 DNA-binding HTH domain, TetR-type VF_0124 IPR009057 Homeodomain-like VF_0124 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VF_0124 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_0124 IPR023769 Nucleoid occlusion factor SlmA VF_0125 IPR003382 Flavoprotein VF_0125 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC VF_0125 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal VF_0126 IPR001405 RadC protein VF_0126 IPR010994 RuvA domain 2-like VF_0126 IPR020891 Uncharacterised protein family UPF0758, conserved site VF_0126 IPR025657 RadC-like JAB domain VF_0127 IPR001383 Ribosomal protein L28 VF_0127 IPR026569 Ribosomal protein L28/L24 VF_0128 IPR001705 Ribosomal protein L33 VF_0128 IPR011332 Zinc-binding ribosomal protein VF_0128 IPR018264 Ribosomal protein L33, conserved site VF_0130 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase VF_0130 IPR010979 Ribosomal protein S13-like, H2TH VF_0130 IPR012319 DNA glycosylase/AP lyase, catalytic domain VF_0130 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding VF_0130 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site VF_0130 IPR020629 Formamidopyrimidine-DNA glycosylase VF_0131 IPR000917 Sulfatase VF_0131 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VF_0131 IPR017850 Alkaline-phosphatase-like, core domain VF_0132 IPR001980 Coenzyme A biosynthesis protein VF_0132 IPR004821 Cytidyltransferase-like domain VF_0132 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0133 IPR001296 Glycosyl transferase, family 1 VF_0134 IPR001173 Glycosyltransferase 2-like VF_0134 IPR029044 Nucleotide-diphospho-sugar transferases VF_0135 IPR002201 Glycosyl transferase, family 9 VF_0136 IPR010440 Lipopolysaccharide kinase VF_0136 IPR011009 Protein kinase-like domain VF_0136 IPR022826 3-deoxy-D-manno-octulosonic acid kinase VF_0137 IPR000917 Sulfatase VF_0137 IPR012159 Membrane sulfatase, HI0842-related VF_0137 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VF_0137 IPR017850 Alkaline-phosphatase-like, core domain VF_0137 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain VF_0138 IPR001296 Glycosyl transferase, family 1 VF_0138 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal VF_0139 IPR002201 Glycosyl transferase, family 9 VF_0139 IPR011910 Lipopolysaccharide heptosyltransferase II VF_0140 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VF_0140 IPR016040 NAD(P)-binding domain VF_0141 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VF_0141 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_0141 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_0141 IPR015424 Pyridoxal phosphate-dependent transferase VF_0141 IPR026385 Aminotransferase, LLPSF_NHT_00031 family VF_0142 IPR003331 UDP-N-acetylglucosamine 2-epimerase VF_0142 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing VF_0143 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal VF_0143 IPR013132 N-acetylneuraminic acid synthase, N-terminal VF_0143 IPR013785 Aldolase-type TIM barrel VF_0143 IPR013974 SAF domain VF_0143 IPR020007 N-acetylneuraminate synthase VF_0144 IPR001451 Bacterial transferase hexapeptide repeat VF_0144 IPR011004 Trimeric LpxA-like VF_0144 IPR016185 Pre-ATP-grasp domain VF_0144 IPR018357 Hexapeptide transferase, conserved site VF_0144 IPR020019 Sialic acid O-acyltransferase, NeuD VF_0145 IPR000644 CBS domain VF_0145 IPR005835 Nucleotidyl transferase VF_0145 IPR029044 Nucleotide-diphospho-sugar transferases VF_0146 IPR000683 Oxidoreductase, N-terminal VF_0146 IPR016040 NAD(P)-binding domain VF_0147 IPR003329 Acylneuraminate cytidylyltransferase VF_0147 IPR029044 Nucleotide-diphospho-sugar transferases VF_0148 IPR002347 Glucose/ribitol dehydrogenase VF_0148 IPR016040 NAD(P)-binding domain VF_0149 IPR001296 Glycosyl transferase, family 1 VF_0151 IPR007016 O-antigen ligase-related VF_0152 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VF_0152 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase VF_0152 IPR016040 NAD(P)-binding domain VF_0153 IPR001279 Beta-lactamase-like VF_0153 IPR011108 RNA-metabolising metallo-beta-lactamase VF_0153 IPR022712 Beta-Casp domain VF_0154 IPR012657 23S rRNA-intervening sequence protein VF_0155 IPR001647 DNA-binding HTH domain, TetR-type VF_0155 IPR009057 Homeodomain-like VF_0155 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_0155 IPR025722 Bacterial transcriptional repressor TetR VF_0157 IPR010344 Protein of unknown function DUF940 VF_0158 IPR010425 Domain of unknown function DUF1017 VF_0160 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VF_0160 IPR023373 YmcC-like domain VF_0162 IPR003715 Polysaccharide export protein VF_0162 IPR019554 Soluble ligand binding domain VF_0163 IPR012657 23S rRNA-intervening sequence protein VF_0164 IPR017867 Protein-tyrosine phosphatase, low molecular weight VF_0164 IPR023485 Phosphotyrosine protein phosphatase I superfamily VF_0165 IPR003856 Lipopolysaccharide biosynthesis VF_0165 IPR005702 Exopolysaccharide synthesis protein VF_0165 IPR025669 AAA domain VF_0165 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0165 IPR032807 VF_0165 VF_0166 IPR005888 dTDP-glucose 4,6-dehydratase VF_0166 IPR016040 NAD(P)-binding domain VF_0167 IPR005835 Nucleotidyl transferase VF_0167 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form VF_0167 IPR029044 Nucleotide-diphospho-sugar transferases VF_0168 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related VF_0168 IPR011051 RmlC-like cupin domain VF_0168 IPR014710 RmlC-like jelly roll fold VF_0169 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VF_0169 IPR016040 NAD(P)-binding domain VF_0170 IPR002797 Polysaccharide biosynthesis protein VF_0172 IPR001451 Bacterial transferase hexapeptide repeat VF_0172 IPR011004 Trimeric LpxA-like VF_0174 IPR001173 Glycosyltransferase 2-like VF_0174 IPR029044 Nucleotide-diphospho-sugar transferases VF_0175 IPR001173 Glycosyltransferase 2-like VF_0175 IPR029044 Nucleotide-diphospho-sugar transferases VF_0176 IPR006218 DAHP synthetase I/KDSA VF_0176 IPR006269 3-deoxy-8-phosphooctulonate synthase VF_0176 IPR013785 Aldolase-type TIM barrel VF_0177 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase VF_0177 IPR023214 HAD-like domain VF_0178 IPR003329 Acylneuraminate cytidylyltransferase VF_0178 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase VF_0178 IPR029044 Nucleotide-diphospho-sugar transferases VF_0179 IPR000644 CBS domain VF_0179 IPR001347 Sugar isomerase (SIS) VF_0179 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type VF_0180 IPR000715 Glycosyl transferase, family 4 VF_0180 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase VF_0181 IPR001041 2Fe-2S ferredoxin-type domain VF_0181 IPR001221 Phenol hydroxylase reductase VF_0181 IPR001433 Oxidoreductase FAD/NAD(P)-binding VF_0181 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VF_0181 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VF_0181 IPR008333 Oxidoreductase, FAD-binding domain VF_0181 IPR012675 Beta-grasp domain VF_0181 IPR017938 Riboflavin synthase-like beta-barrel VF_0182 IPR005835 Nucleotidyl transferase VF_0182 IPR013446 Glucose-1-phosphate cytidylyltransferase VF_0182 IPR029044 Nucleotide-diphospho-sugar transferases VF_0183 IPR013445 CDP-glucose 4,6-dehydratase VF_0183 IPR016040 NAD(P)-binding domain VF_0184 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VF_0184 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_0184 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_0184 IPR015424 Pyridoxal phosphate-dependent transferase VF_0185 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VF_0185 IPR012000 Thiamine pyrophosphate enzyme, central domain VF_0185 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VF_0185 IPR029035 DHS-like NAD/FAD-binding domain VF_0185 IPR029061 Thiamin diphosphate-binding fold VF_0186 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VF_0186 IPR016040 NAD(P)-binding domain VF_0187 IPR001173 Glycosyltransferase 2-like VF_0187 IPR029044 Nucleotide-diphospho-sugar transferases VF_0188 IPR001173 Glycosyltransferase 2-like VF_0188 IPR029044 Nucleotide-diphospho-sugar transferases VF_0189 IPR002797 Polysaccharide biosynthesis protein VF_0191 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VF_0191 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain VF_0191 IPR016040 NAD(P)-binding domain VF_0192 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VF_0192 IPR011051 RmlC-like cupin domain VF_0192 IPR014710 RmlC-like jelly roll fold VF_0192 IPR016040 NAD(P)-binding domain VF_0193 IPR003331 UDP-N-acetylglucosamine 2-epimerase VF_0193 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type VF_0195 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VF_0195 IPR016040 NAD(P)-binding domain VF_0196 IPR003362 Bacterial sugar transferase VF_0197 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VF_0197 IPR016040 NAD(P)-binding domain VF_0197 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0200 IPR003156 DHHA1 domain VF_0201 IPR005886 UDP-glucose 4-epimerase GalE VF_0201 IPR016040 NAD(P)-binding domain VF_0202 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent VF_0202 IPR006124 Metalloenzyme VF_0202 IPR011258 BPG-independent PGAM, N-terminal VF_0202 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VF_0202 IPR017850 Alkaline-phosphatase-like, core domain VF_0203 IPR002528 Multi antimicrobial extrusion protein VF_0204 IPR011032 GroES (chaperonin 10)-like VF_0204 IPR018369 Chaperonin Cpn10, conserved site VF_0204 IPR020818 Chaperonin Cpn10 VF_0205 IPR001844 Chaperonin Cpn60 VF_0205 IPR002423 Chaperonin Cpn60/TCP-1 VF_0205 IPR018370 Chaperonin Cpn60, conserved site VF_0205 IPR027409 GroEL-like apical domain VF_0205 IPR027413 GroEL-like equatorial domain VF_0206 IPR000652 Triosephosphate isomerase VF_0206 IPR013785 Aldolase-type TIM barrel VF_0206 IPR020861 Triosephosphate isomerase, active site VF_0206 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic VF_0207 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase VF_0207 IPR014347 Tautomerase/MIF superfamily VF_0208 IPR021482 Protein of unknown function DUF3135 VF_0209 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase VF_0210 IPR009252 Cell division protein ZapB VF_0211 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase VF_0211 IPR010203 Regulator of ribonuclease activity A VF_0211 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria VF_0212 IPR000537 UbiA prenyltransferase family VF_0212 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase VF_0212 IPR026046 UbiA prenyltransferase domain containing protein 1 VF_0214 IPR006082 Phosphoribulokinase VF_0214 IPR006083 Phosphoribulokinase/uridine kinase VF_0214 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0215 IPR010648 Uncharacterised protein family UPF0270 VF_0216 IPR000073 Alpha/beta hydrolase fold-1 VF_0216 IPR012020 AB-hydrolase YheT, putative VF_0216 IPR029058 Alpha/Beta hydrolase fold VF_0217 IPR012659 Conserved hypothetical protein CHP02444 VF_0218 IPR003439 ABC transporter-like VF_0218 IPR003593 AAA+ ATPase domain VF_0218 IPR017871 ABC transporter, conserved site VF_0218 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0218 IPR032781 VF_0218 VF_0219 IPR003680 Flavodoxin-like fold VF_0219 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG VF_0219 IPR029039 Flavoprotein-like VF_0220 IPR003148 Regulator of K+ conductance, N-terminal VF_0220 IPR004771 K+/H+ exchanger VF_0220 IPR006153 Cation/H+ exchanger VF_0220 IPR016040 NAD(P)-binding domain VF_0220 IPR020884 Glutathione-regulated potassium-efflux system protein KefB VF_0222 IPR012658 Conserved hypothetical protein CHP02443 VF_0223 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VF_0223 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VF_0224 IPR007236 SlyX VF_0225 IPR001680 WD40 repeat VF_0225 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily VF_0225 IPR015943 WD40/YVTN repeat-like-containing domain VF_0225 IPR019775 WD40 repeat, conserved site VF_0226 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VF_0226 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VF_0226 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VF_0227 IPR013559 YheO-like VF_0228 IPR003787 Sulphur relay, DsrE/F-like protein VF_0228 IPR017463 Sulphur relay, TusD/DsrE VF_0228 IPR027396 DsrEFH-like VF_0229 IPR003787 Sulphur relay, DsrE/F-like protein VF_0229 IPR017462 Sulphur relay, TusC/DsrF VF_0229 IPR027396 DsrEFH-like VF_0230 IPR005679 Ribosomal protein S12, bacteria VF_0230 IPR006032 Ribosomal protein S12/S23 VF_0230 IPR012340 Nucleic acid-binding, OB-fold VF_0231 IPR000235 Ribosomal protein S5/S7 VF_0231 IPR005717 Ribosomal protein S7, bacterial/organellar-type VF_0231 IPR020606 Ribosomal protein S7, conserved site VF_0231 IPR023798 Ribosomal protein S7 domain VF_0232 IPR000640 Translation elongation factor EFG, V domain VF_0232 IPR000795 Elongation factor, GTP-binding domain VF_0232 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VF_0232 IPR004540 Translation elongation factor EFG/EF2 VF_0232 IPR005225 Small GTP-binding protein domain VF_0232 IPR005517 Translation elongation factor EFG/EF2, domain IV VF_0232 IPR009000 Translation protein, beta-barrel domain VF_0232 IPR009022 Elongation factor G, III-V domain VF_0232 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_0232 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0232 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0232 IPR031157 VF_0232 VF_0233 IPR000795 Elongation factor, GTP-binding domain VF_0233 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VF_0233 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VF_0233 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VF_0233 IPR005225 Small GTP-binding protein domain VF_0233 IPR009000 Translation protein, beta-barrel domain VF_0233 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VF_0233 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0233 IPR031157 VF_0233 VF_0234 IPR001848 Ribosomal protein S10 VF_0234 IPR018268 Ribosomal protein S10, conserved site VF_0234 IPR027486 Ribosomal protein S10 domain VF_0235 IPR000597 Ribosomal protein L3 VF_0235 IPR009000 Translation protein, beta-barrel domain VF_0235 IPR019926 Ribosomal protein L3, conserved site VF_0235 IPR019927 Ribosomal protein L3, bacterial/organelle-type VF_0237 IPR002136 Ribosomal protein L4/L1e VF_0237 IPR013005 Ribosomal protein L4/L1e, bacterial-type VF_0237 IPR023574 Ribosomal protein L4 domain VF_0238 IPR012677 Nucleotide-binding, alpha-beta plait VF_0238 IPR012678 Ribosomal protein L23/L15e core domain VF_0238 IPR013025 Ribosomal protein L25/L23 VF_0239 IPR002171 Ribosomal protein L2 VF_0239 IPR005880 Ribosomal protein L2, bacterial/organellar-type VF_0239 IPR008991 Translation protein SH3-like domain VF_0239 IPR012340 Nucleic acid-binding, OB-fold VF_0239 IPR014722 Ribosomal protein L2 domain 2 VF_0239 IPR014726 Ribosomal protein L2, domain 3 VF_0239 IPR022666 Ribosomal Proteins L2, RNA binding domain VF_0239 IPR022669 Ribosomal protein L2, C-terminal VF_0239 IPR022671 Ribosomal protein L2, conserved site VF_0240 IPR002222 Ribosomal protein S19/S15 VF_0240 IPR005732 Ribosomal protein S19, bacterial-type VF_0240 IPR020934 Ribosomal protein S19 conserved site VF_0240 IPR023575 Ribosomal protein S19, superfamily VF_0241 IPR001063 Ribosomal protein L22/L17 VF_0241 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type VF_0241 IPR018260 Ribosomal protein L22/L17, conserved site VF_0242 IPR001351 Ribosomal protein S3, C-terminal VF_0242 IPR004044 K Homology domain, type 2 VF_0242 IPR004087 K Homology domain VF_0242 IPR005704 Ribosomal protein S3, bacterial VF_0242 IPR009019 K homology domain, prokaryotic type VF_0242 IPR015946 K homology domain-like, alpha/beta VF_0242 IPR018280 Ribosomal protein S3, conserved site VF_0243 IPR000114 Ribosomal protein L16 VF_0243 IPR016180 Ribosomal protein L10e/L16 VF_0243 IPR020798 Ribosomal protein L16, conserved site VF_0244 IPR001854 Ribosomal protein L29 VF_0244 IPR018254 Ribosomal protein L29, conserved site VF_0245 IPR000266 Ribosomal protein S17 VF_0245 IPR012340 Nucleic acid-binding, OB-fold VF_0245 IPR019979 Ribosomal protein S17, conserved site VF_0245 IPR019984 Ribosomal protein S17, bacterial-type VF_0246 IPR000218 Ribosomal protein L14b/L23e VF_0246 IPR005745 Ribosomal protein L14, bacterial-type VF_0246 IPR019972 Ribosomal protein L14 conserved site VF_0248 IPR003256 Ribosomal protein L24 VF_0248 IPR005824 KOW VF_0248 IPR005825 Ribosomal protein L24/L26, conserved site VF_0248 IPR008991 Translation protein SH3-like domain VF_0248 IPR014722 Ribosomal protein L2 domain 2 VF_0249 IPR002132 Ribosomal protein L5 VF_0249 IPR020929 Ribosomal protein L5, conserved site VF_0249 IPR020930 Ribosomal protein L5, bacterial-type VF_0249 IPR022803 Ribosomal protein L5 domain VF_0249 IPR031309 VF_0249 VF_0249 IPR031310 VF_0249 VF_0250 IPR001209 Ribosomal protein S14 VF_0250 IPR018271 Ribosomal protein S14, conserved site VF_0250 IPR023036 Ribosomal protein S14, bacterial/plastid VF_0251 IPR000630 Ribosomal protein S8 VF_0252 IPR000702 Ribosomal protein L6 VF_0252 IPR002358 Ribosomal protein L6, conserved site VF_0252 IPR019906 Ribosomal protein L6, bacterial-type VF_0252 IPR020040 Ribosomal protein L6, alpha-beta domain VF_0253 IPR004389 Ribosomal protein L18, bacterial-type VF_0253 IPR005484 Ribosomal protein L18/L5 VF_0254 IPR000851 Ribosomal protein S5 VF_0254 IPR005324 Ribosomal protein S5, C-terminal VF_0254 IPR005712 Ribosomal protein S5, bacterial-type VF_0254 IPR013810 Ribosomal protein S5, N-terminal VF_0254 IPR014720 Double-stranded RNA-binding domain VF_0254 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_0254 IPR018192 Ribosomal protein S5, N-terminal, conserved site VF_0254 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0255 IPR005996 Ribosomal protein L30, bacterial-type VF_0255 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VF_0256 IPR001196 Ribosomal protein L15, conserved site VF_0256 IPR005749 Ribosomal protein L15, bacterial-type VF_0256 IPR021131 Ribosomal protein L18e/L15P VF_0256 IPR030878 VF_0256 VF_0257 IPR002208 SecY/SEC61-alpha family VF_0257 IPR023201 SecY subunit domain VF_0257 IPR026593 Protein translocase subunit SecY VF_0257 IPR030659 VF_0257 VF_0258 IPR000473 Ribosomal protein L36 VF_0259 IPR001892 Ribosomal protein S13 VF_0259 IPR010979 Ribosomal protein S13-like, H2TH VF_0259 IPR018269 Ribosomal protein S13, conserved site VF_0259 IPR019980 Ribosomal protein S13, bacterial-type VF_0259 IPR027437 30s ribosomal protein S13, C-terminal VF_0260 IPR001971 Ribosomal protein S11 VF_0260 IPR018102 Ribosomal S11, conserved site VF_0260 IPR019981 Ribosomal protein S11, bacterial-type VF_0261 IPR001912 Ribosomal protein S4/S9, N-terminal VF_0261 IPR002942 RNA-binding S4 domain VF_0261 IPR005709 Ribosomal protein S4, bacterial-type VF_0261 IPR018079 Ribosomal protein S4, conserved site VF_0261 IPR022801 Ribosomal protein S4/S9 VF_0262 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain VF_0262 IPR011260 RNA polymerase, alpha subunit, C-terminal VF_0262 IPR011262 DNA-directed RNA polymerase, insert domain VF_0262 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type VF_0262 IPR011773 DNA-directed RNA polymerase, alpha subunit VF_0263 IPR000456 Ribosomal protein L17 VF_0264 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase VF_0264 IPR020548 Fructose-1,6-bisphosphatase, active site VF_0264 IPR028343 Fructose-1,6-bisphosphatase VF_0264 IPR033391 VF_0264 VF_0265 IPR000713 Mur ligase, N-terminal VF_0265 IPR004101 Mur ligase, C-terminal VF_0265 IPR005757 Murein peptide ligase VF_0265 IPR013221 Mur ligase, central VF_0265 IPR016040 NAD(P)-binding domain VF_0266 IPR003382 Flavoprotein VF_0266 IPR004507 Decarboxylase UbiX/Pad1 VF_0267 IPR005948 Thiamine ABC transporter periplasmic binding protein VF_0267 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein VF_0268 IPR000515 MetI-like domain VF_0268 IPR005947 Thiamine ABC transporter, permease protein VF_0269 IPR003439 ABC transporter-like VF_0269 IPR003593 AAA+ ATPase domain VF_0269 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ VF_0269 IPR017871 ABC transporter, conserved site VF_0269 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0270 IPR000330 SNF2-related VF_0270 IPR001650 Helicase, C-terminal VF_0270 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_0270 IPR022737 RNA polymerase recycling, bacterial, C-terminal VF_0270 IPR023949 RNA polymerase-associated protein RapA VF_0270 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0271 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VF_0271 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VF_0271 IPR006225 Pseudouridine synthase, RluC/RluD VF_0271 IPR020103 Pseudouridine synthase, catalytic domain VF_0272 IPR006015 Universal stress protein A VF_0272 IPR006016 UspA VF_0272 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0273 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VF_0273 IPR011853 TRAP transporter, 4TM/12TM fusion protein VF_0273 IPR021814 Protein of unknown function DUF3394 VF_0274 IPR011852 TRAP transporter solute receptor, TAXI family VF_0275 IPR001669 Arginine repressor VF_0275 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0275 IPR020899 Arginine repressor, C-terminal VF_0275 IPR020900 Arginine repressor, DNA-binding domain VF_0275 IPR024946 Arginine repressor C-terminal-like domain VF_0276 IPR001236 Lactate/malate dehydrogenase, N-terminal VF_0276 IPR001252 Malate dehydrogenase, active site VF_0276 IPR001557 L-lactate/malate dehydrogenase VF_0276 IPR010097 Malate dehydrogenase, type 1 VF_0276 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal VF_0276 IPR016040 NAD(P)-binding domain VF_0276 IPR022383 Lactate/malate dehydrogenase, C-terminal VF_0276 IPR023958 Malate dehydrogenase, type 1, bacterial VF_0277 IPR000092 Polyprenyl synthetase VF_0277 IPR008949 Terpenoid synthase VF_0277 IPR017446 Polyprenyl synthetase-related VF_0278 IPR001787 Ribosomal protein L21 VF_0278 IPR018258 Ribosomal protein L21, conserved site VF_0278 IPR028909 Ribosomal protein L21-like VF_0279 IPR001684 Ribosomal protein L27 VF_0279 IPR018261 Ribosomal protein L27, conserved site VF_0280 IPR006073 GTP binding domain VF_0280 IPR006074 GTP1/OBG, conserved site VF_0280 IPR006169 GTP1/OBG domain VF_0280 IPR014100 GTP-binding protein Obg/CgtA VF_0280 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0281 IPR010619 Domain of unknown function DUF1212 VF_0283 IPR024528 Domain of unknown function DUF3815 VF_0284 IPR001796 Dihydrofolate reductase domain VF_0284 IPR012259 Dihydrofolate reductase VF_0284 IPR024072 Dihydrofolate reductase-like domain VF_0285 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) VF_0285 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VF_0285 IPR029052 Metallo-dependent phosphatase-like VF_0286 IPR001737 Ribosomal RNA adenine methylase transferase VF_0286 IPR011530 Ribosomal RNA adenine dimethylase VF_0286 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site VF_0286 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal VF_0286 IPR023165 rRNA adenine dimethylase-like VF_0286 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0287 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA VF_0287 IPR024084 Isopropylmalate dehydrogenase-like domain VF_0288 IPR015391 SurA N-terminal VF_0288 IPR023034 Peptidyl-prolyl isomerase SurA VF_0288 IPR027304 Trigger factor/SurA domain VF_0289 IPR005653 Organic solvent tolerance-like, N-terminal VF_0289 IPR007543 Organic solvent tolerance protein, C-terminal VF_0289 IPR020889 Lipopolysaccharide assembly, LptD VF_0290 IPR001623 DnaJ domain VF_0290 IPR007791 Heat shock protein DnaJ-like protein DjlA VF_0290 IPR023749 DnaJ-like protein DjlA VF_0290 IPR029024 TerB-like VF_0291 IPR006869 Domain of unknown function DUF547 VF_0292 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel VF_0292 IPR004431 3-isopropylmalate dehydratase, small subunit VF_0292 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VF_0292 IPR015937 Aconitase/isopropylmalate dehydratase VF_0293 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha VF_0293 IPR004430 3-isopropylmalate dehydratase, large subunit VF_0293 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VF_0293 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 VF_0293 IPR015937 Aconitase/isopropylmalate dehydratase VF_0293 IPR018136 Aconitase family, 4Fe-4S cluster binding site VF_0294 IPR001804 Isocitrate and isopropylmalate dehydrogenases family VF_0294 IPR004429 Isopropylmalate dehydrogenase VF_0294 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site VF_0294 IPR024084 Isopropylmalate dehydrogenase-like domain VF_0295 IPR000891 Pyruvate carboxyltransferase VF_0295 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site VF_0295 IPR005671 2-isopropylmalate synthase, bacterial-type VF_0295 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain VF_0295 IPR013785 Aldolase-type TIM barrel VF_0296 IPR001647 DNA-binding HTH domain, TetR-type VF_0296 IPR009057 Homeodomain-like VF_0296 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_0298 IPR001036 Acriflavin resistance protein VF_0298 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VF_0300 IPR007433 Protein of unknown function DUF481 VF_0301 IPR007692 DNA helicase, DnaB type VF_0301 IPR007693 DNA helicase, DnaB-like, N-terminal VF_0301 IPR007694 DNA helicase, DnaB-like, C-terminal VF_0301 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VF_0301 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0302 IPR000821 Alanine racemase VF_0302 IPR001608 Alanine racemase, N-terminal VF_0302 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VF_0302 IPR011079 Alanine racemase, C-terminal VF_0302 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VF_0302 IPR029066 PLP-binding barrel VF_0304 IPR001672 Phosphoglucose isomerase (PGI) VF_0304 IPR018189 Phosphoglucose isomerase, conserved site VF_0304 IPR023096 Phosphoglucose isomerase, C-terminal VF_0305 IPR028051 Chemotaxis phosphatase CheX-like domain VF_0305 IPR028976 CheC-like domain VF_0306 IPR002481 Ferric-uptake regulator VF_0306 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0307 IPR001269 tRNA-dihydrouridine synthase VF_0307 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN VF_0307 IPR013785 Aldolase-type TIM barrel VF_0307 IPR018517 tRNA-dihydrouridine synthase, conserved site VF_0308 IPR026387 Outer membrane protein VF_0310 IPR001094 Flavodoxin VF_0310 IPR001433 Oxidoreductase FAD/NAD(P)-binding VF_0310 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VF_0310 IPR003097 FAD-binding, type 1 VF_0310 IPR008254 Flavodoxin/nitric oxide synthase VF_0310 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain VF_0310 IPR017938 Riboflavin synthase-like beta-barrel VF_0310 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 VF_0310 IPR029039 Flavoprotein-like VF_0310 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria VF_0311 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain VF_0311 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site VF_0311 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain VF_0311 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit VF_0312 IPR002500 Phosphoadenosine phosphosulphate reductase VF_0312 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase VF_0312 IPR011800 Phosphoadenosine phosphosulphate reductase CysH VF_0312 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0313 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VF_0314 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VF_0314 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VF_0314 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VF_0315 IPR007340 Opacity-associated protein A VF_0315 IPR013731 Opacity-associated protein A, N-terminal VF_0316 IPR000620 Drug/metabolite transporter VF_0317 IPR000182 GNAT domain VF_0317 IPR016181 Acyl-CoA N-acyltransferase VF_0318 IPR000595 Cyclic nucleotide-binding domain VF_0318 IPR014710 RmlC-like jelly roll fold VF_0318 IPR018490 Cyclic nucleotide-binding-like VF_0319 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VF_0319 IPR006146 5'-Nucleotidase, conserved site VF_0319 IPR006179 5'-Nucleotidase/apyrase VF_0319 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase VF_0319 IPR008334 5'-Nucleotidase, C-terminal VF_0319 IPR029052 Metallo-dependent phosphatase-like VF_0320 IPR002500 Phosphoadenosine phosphosulphate reductase VF_0320 IPR011784 Sulphate adenylyltransferase, small subunit VF_0320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0321 IPR000795 Elongation factor, GTP-binding domain VF_0321 IPR009000 Translation protein, beta-barrel domain VF_0321 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VF_0321 IPR011779 Sulphate adenylyltransferase, large subunit VF_0321 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0321 IPR031157 VF_0321 VF_0322 IPR004680 Citrate transporter-like domain VF_0322 IPR006037 Regulator of K+ conductance, C-terminal VF_0323 IPR002891 Adenylylsulphate kinase VF_0323 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0324 IPR021254 Protein of unknown function DUF2806 VF_0325 IPR021727 Protein of unknown function DUF3299 VF_0326 IPR003838 Permease FtsX-like VF_0326 IPR025857 MacB-like periplasmic core domain VF_0327 IPR003439 ABC transporter-like VF_0327 IPR003593 AAA+ ATPase domain VF_0327 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0328 IPR021253 Protein of unknown function DUF2796 VF_0329 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VF_0329 IPR012336 Thioredoxin-like fold VF_0330 IPR009491 Protein of unknown function DUF1107 VF_0331 IPR002569 Peptide methionine sulphoxide reductase MsrA VF_0331 IPR028427 Peptide methionine sulfoxide reductase VF_0332 IPR000184 Bacterial surface antigen (D15) VF_0332 IPR010827 Surface antigen variable number VF_0333 IPR007452 Protein of unknown function DUF490 VF_0336 IPR006153 Cation/H+ exchanger VF_0336 IPR018422 Cation/H+ exchanger, CPA1 family VF_0337 IPR000489 Pterin-binding VF_0337 IPR003726 Homocysteine S-methyltransferase VF_0337 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain VF_0337 IPR004223 Vitamin B12-dependent methionine synthase, activation domain VF_0337 IPR006158 Cobalamin (vitamin B12)-binding domain VF_0337 IPR011005 Dihydropteroate synthase-like VF_0337 IPR011822 Cobalamin-dependent methionine synthase VF_0338 IPR001048 Aspartate/glutamate/uridylate kinase VF_0338 IPR001341 Aspartate kinase domain VF_0338 IPR005260 Aspartate kinase, monofunctional class VF_0338 IPR018042 Aspartate kinase, conserved site VF_0339 IPR000192 Aminotransferase class V domain VF_0339 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_0339 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_0339 IPR015424 Pyridoxal phosphate-dependent transferase VF_0339 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site VF_0339 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase VF_0340 IPR007016 O-antigen ligase-related VF_0340 IPR021797 Protein of unknown function DUF3366 VF_0340 IPR031726 VF_0340 VF_0341 IPR003439 ABC transporter-like VF_0341 IPR004602 UvrABC system subunit A VF_0341 IPR013815 ATP-grasp fold, subdomain 1 VF_0341 IPR017871 ABC transporter, conserved site VF_0341 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0342 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type VF_0342 IPR005835 Nucleotidyl transferase VF_0342 IPR029044 Nucleotide-diphospho-sugar transferases VF_0344 IPR001296 Glycosyl transferase, family 1 VF_0344 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain VF_0345 IPR001296 Glycosyl transferase, family 1 VF_0345 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain VF_0346 IPR001173 Glycosyltransferase 2-like VF_0346 IPR029044 Nucleotide-diphospho-sugar transferases VF_0349 IPR003856 Lipopolysaccharide biosynthesis VF_0349 IPR017746 Cellulose synthase operon protein YhjQ VF_0349 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0349 IPR032807 VF_0349 VF_0350 IPR003715 Polysaccharide export protein VF_0350 IPR019554 Soluble ligand binding domain VF_0351 IPR018759 Protein of unknown function DUF2320 VF_0352 IPR003362 Bacterial sugar transferase VF_0352 IPR016040 NAD(P)-binding domain VF_0352 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ VF_0352 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VF_0353 IPR000424 Primosome PriB/single-strand DNA-binding VF_0353 IPR011344 Single-stranded DNA-binding protein VF_0353 IPR012340 Nucleic acid-binding, OB-fold VF_0355 IPR000160 GGDEF domain VF_0355 IPR001633 EAL domain VF_0355 IPR029787 Nucleotide cyclase VF_0355 IPR033423 VF_0355 VF_0356 IPR016871 MSHA biogenesis protein, MshI VF_0357 IPR007690 Type II secretion system, protein M VF_0357 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VF_0359 IPR001775 GspD/PilQ family VF_0359 IPR004846 Type II/III secretion system VF_0359 IPR011514 Secretin, N-terminal VF_0359 IPR011662 Secretin/TonB, short N-terminal VF_0359 IPR013358 Pilus biogenesis, MshL VF_0360 IPR003593 AAA+ ATPase domain VF_0360 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0361 IPR011990 Tetratricopeptide-like helical domain VF_0361 IPR019734 Tetratricopeptide repeat VF_0362 IPR001482 Type II secretion system protein E VF_0362 IPR003593 AAA+ ATPase domain VF_0362 IPR007831 General secretory system II, protein E, N-terminal VF_0362 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0363 IPR003004 GspF/PilC family VF_0363 IPR018076 Type II secretion system F domain VF_0365 IPR012902 Prokaryotic N-terminal methylation site VF_0366 IPR012902 Prokaryotic N-terminal methylation site VF_0367 IPR012902 Prokaryotic N-terminal methylation site VF_0368 IPR012902 Prokaryotic N-terminal methylation site VF_0369 IPR012902 Prokaryotic N-terminal methylation site VF_0372 IPR004753 Cell shape determining protein MreB/Mrl VF_0373 IPR007221 Rod shape-determining protein MreC VF_0374 IPR007227 Cell shape-determining protein MreD VF_0374 IPR026034 Cell shape-determining protein MreD, proteobacterial type VF_0375 IPR003697 Maf-like protein VF_0375 IPR029001 Inosine triphosphate pyrophosphatase-like VF_0376 IPR004659 Ribonuclease E/G VF_0376 IPR012340 Nucleic acid-binding, OB-fold VF_0376 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VF_0376 IPR022967 RNA-binding domain, S1 VF_0377 IPR011836 Conserved hypothetical protein CHP02099 VF_0377 IPR025263 Domain of unknown function DUF3971 VF_0377 IPR032712 VF_0377 VF_0378 IPR001110 Uncharacterised protein family UPF0012, conserved site VF_0378 IPR003010 Carbon-nitrogen hydrolase VF_0379 IPR002510 TldD/PmbA VF_0379 IPR025502 TldD VF_0380 IPR006839 Ribosome-associated, YjgA VF_0380 IPR023153 PSPTO4464-like domain VF_0381 IPR002510 TldD/PmbA VF_0382 IPR000644 CBS domain VF_0382 IPR006667 SLC41 divalent cation transporters, integral membrane domain VF_0382 IPR006668 Magnesium transporter, MgtE intracellular domain VF_0382 IPR006669 Magnesium transporter MgtE VF_0383 IPR000032 Phosphocarrier HPr protein-like VF_0384 IPR005337 ATPase, P-loop-containing VF_0384 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0385 IPR002178 PTS EIIA type-2 domain VF_0385 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN VF_0385 IPR016152 Phosphotransferase/anion transporter VF_0386 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein VF_0387 IPR000394 RNA polymerase sigma factor 54 VF_0387 IPR007046 RNA polymerase sigma factor 54, core-binding VF_0387 IPR007634 RNA polymerase sigma factor 54, DNA-binding VF_0388 IPR003439 ABC transporter-like VF_0388 IPR003593 AAA+ ATPase domain VF_0388 IPR017871 ABC transporter, conserved site VF_0388 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0388 IPR030921 VF_0388 VF_0388 IPR032823 VF_0388 VF_0389 IPR005653 Organic solvent tolerance-like, N-terminal VF_0389 IPR014340 Lipopolysaccharide assembly, LptA VF_0390 IPR010664 Lipopolysaccharide assembly, LptC-related VF_0390 IPR026265 Lipopolysaccharide export system protein LptC VF_0391 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase VF_0391 IPR023214 HAD-like domain VF_0392 IPR000644 CBS domain VF_0392 IPR001347 Sugar isomerase (SIS) VF_0392 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type VF_0393 IPR004481 Sodium/potassium/calcium exchanger VF_0393 IPR004837 Sodium/calcium exchanger membrane region VF_0394 IPR003439 ABC transporter-like VF_0394 IPR003593 AAA+ ATPase domain VF_0394 IPR017871 ABC transporter, conserved site VF_0394 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0395 IPR003453 Permease domain VF_0395 IPR030802 VF_0395 VF_0396 IPR003399 Mammalian cell entry-related VF_0396 IPR030970 VF_0396 VF_0397 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VF_0397 IPR023094 Toluene tolerance protein, alpha-helical VF_0397 IPR032710 VF_0397 VF_0399 IPR002645 STAS domain VF_0400 IPR002634 BolA protein VF_0401 IPR001986 Enolpyruvate transferase domain VF_0401 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase VF_0401 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VF_0402 IPR002123 Phospholipid/glycerol acyltransferase VF_0402 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase VF_0403 IPR000086 NUDIX hydrolase domain VF_0403 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 VF_0403 IPR015797 NUDIX hydrolase domain-like VF_0404 IPR006056 Enamine/imine deaminase YjgF-like VF_0404 IPR006175 YjgF/Yer057p/UK114 family VF_0404 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VF_0404 IPR019897 YjgF-like protein, conserved site VF_0405 IPR002801 Aspartate transcarbamylase regulatory subunit VF_0405 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VF_0405 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VF_0406 IPR002082 Aspartate carbamoyltransferase VF_0406 IPR006130 Aspartate/ornithine carbamoyltransferase VF_0406 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VF_0406 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VF_0407 IPR002292 Ornithine/putrescine carbamoyltransferase VF_0407 IPR006130 Aspartate/ornithine carbamoyltransferase VF_0407 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain VF_0407 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding VF_0407 IPR024904 Ornithine carbamoyltransferase VF_0408 IPR003876 Arginine deiminase VF_0408 IPR033199 VF_0408 VF_0409 IPR009671 Regulator of ribonuclease activity B domain VF_0409 IPR016716 Regulator of ribonuclease activity B VF_0410 IPR006104 Glycosyl hydrolases family 2, sugar binding domain VF_0410 IPR008979 Galactose-binding domain-like VF_0411 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VF_0411 IPR002300 Aminoacyl-tRNA synthetase, class Ia VF_0411 IPR002303 Valine-tRNA ligase VF_0411 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VF_0411 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VF_0411 IPR010978 tRNA-binding arm VF_0411 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VF_0411 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0411 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm VF_0412 IPR007459 DNA polymerase III chi subunit, HolC VF_0413 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VF_0413 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal VF_0413 IPR011356 Leucine aminopeptidase/peptidase B VF_0413 IPR023042 Peptidase M17, leucine aminopeptidase VF_0414 IPR005495 Permease YjgP/YjgQ, predicted VF_0414 IPR030922 VF_0414 VF_0415 IPR005495 Permease YjgP/YjgQ, predicted VF_0415 IPR030923 VF_0415 VF_0416 IPR010432 RDD VF_0417 IPR021376 Protein of unknown function DUF2999 VF_0418 IPR000829 Diacylglycerol kinase, prokaryotic VF_0420 IPR000189 Prokaryotic transglycosylase, active site VF_0420 IPR008258 Lytic transglycosylase-like SLT domain VF_0420 IPR023346 Lysozyme-like domain VF_0420 IPR024570 Murein transglycosylase-C, N-terminal VF_0421 IPR007457 Fe(II) trafficking protein YggX VF_0422 IPR000445 Helix-hairpin-helix motif VF_0422 IPR003265 HhH-GPD domain VF_0422 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VF_0422 IPR004035 Endonuclease III, iron-sulphur binding site VF_0422 IPR005760 A/G-specific adenine glycosylase MutY VF_0422 IPR011257 DNA glycosylase VF_0422 IPR015797 NUDIX hydrolase domain-like VF_0422 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VF_0422 IPR029119 MutY, C-terminal VF_0423 IPR012338 Beta-lactamase/transpeptidase-like VF_0423 IPR015868 Glutaminase VF_0424 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related VF_0424 IPR006638 Elongator protein 3/MiaB/NifB VF_0424 IPR007197 Radical SAM VF_0424 IPR023404 Radical SAM, alpha/beta horseshoe VF_0425 IPR002637 Ham1-like protein VF_0425 IPR020922 Non-canonical purine NTP pyrophosphatase VF_0425 IPR029001 Inosine triphosphate pyrophosphatase-like VF_0426 IPR025218 Domain of unknown function DUF4426 VF_0427 IPR003746 Protein of unknown function DUF167 VF_0427 IPR005228 Conserved hypothetical protein CHP00251 VF_0428 IPR003425 Uncharacterised protein family Ycf19 VF_0429 IPR000304 Pyrroline-5-carboxylate reductase VF_0429 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VF_0429 IPR016040 NAD(P)-binding domain VF_0429 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VF_0429 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain VF_0430 IPR001608 Alanine racemase, N-terminal VF_0430 IPR011078 Uncharacterised protein family UPF0001 VF_0430 IPR029066 PLP-binding barrel VF_0431 IPR001482 Type II secretion system protein E VF_0431 IPR003593 AAA+ ATPase domain VF_0431 IPR006321 Pilus retraction protein PilT VF_0431 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0432 IPR001482 Type II secretion system protein E VF_0432 IPR006321 Pilus retraction protein PilT VF_0432 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0433 IPR005227 Resolvase, holliday junction-type, YqgF-like VF_0433 IPR006641 YqgF/RNase H-like domain VF_0433 IPR012337 Ribonuclease H-like domain VF_0434 IPR003774 Protein of unknown function UPF0301 VF_0435 IPR004215 Prokaryotic glutathione synthetase, N-terminal VF_0435 IPR004218 Prokaryotic glutathione synthetase, ATP-binding VF_0435 IPR006284 Glutathione synthetase, prokaryotic VF_0435 IPR013815 ATP-grasp fold, subdomain 1 VF_0435 IPR013816 ATP-grasp fold, subdomain 2 VF_0435 IPR016185 Pre-ATP-grasp domain VF_0436 IPR006700 Ribosomal RNA small subunit methyltransferase E VF_0436 IPR015947 PUA-like domain VF_0436 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VF_0436 IPR029028 Alpha/beta knot methyltransferases VF_0437 IPR007346 Endonuclease I VF_0438 IPR006640 Domain of unknown function SprT-like VF_0438 IPR023483 Uncharacterised protein family SprT VF_0439 IPR002133 S-adenosylmethionine synthetase VF_0439 IPR022628 S-adenosylmethionine synthetase, N-terminal VF_0439 IPR022629 S-adenosylmethionine synthetase, central domain VF_0439 IPR022630 S-adenosylmethionine synthetase, C-terminal VF_0439 IPR022631 S-adenosylmethionine synthetase, conserved site VF_0439 IPR022636 S-adenosylmethionine synthetase superfamily VF_0440 IPR005474 Transketolase, N-terminal VF_0440 IPR005475 Transketolase-like, pyrimidine-binding domain VF_0440 IPR005478 Transketolase, bacterial-like VF_0440 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II VF_0440 IPR020826 Transketolase binding site VF_0440 IPR029061 Thiamin diphosphate-binding fold VF_0440 IPR033247 VF_0440 VF_0440 IPR033248 VF_0440 VF_0441 IPR006422 D-erythrose-4-phosphate dehydrogenase VF_0441 IPR016040 NAD(P)-binding domain VF_0441 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VF_0441 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VF_0441 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VF_0442 IPR001576 Phosphoglycerate kinase VF_0442 IPR015824 Phosphoglycerate kinase, N-terminal VF_0442 IPR015901 Phosphoglycerate kinase, C-terminal VF_0442 IPR015911 Phosphoglycerate kinase, conserved site VF_0443 IPR000771 Ketose-bisphosphate aldolase, class-II VF_0443 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype VF_0443 IPR013785 Aldolase-type TIM barrel VF_0444 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VF_0444 IPR001650 Helicase, C-terminal VF_0444 IPR011545 DEAD/DEAH box helicase domain VF_0444 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_0444 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0444 IPR028621 ATP-dependent RNA helicase SrmB VF_0445 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VF_0445 IPR007848 Methyltransferase small domain VF_0445 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase VF_0445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0446 IPR004685 Branched-chain amino acid transport system II carrier protein VF_0447 IPR008254 Flavodoxin/nitric oxide synthase VF_0447 IPR010086 Flavodoxin, long chain VF_0447 IPR029039 Flavoprotein-like VF_0448 IPR002104 Integrase, catalytic VF_0448 IPR004107 Integrase, SAM-like, N-terminal VF_0448 IPR011010 DNA breaking-rejoining enzyme, catalytic core VF_0448 IPR011932 Tyrosine recombinase XerD VF_0448 IPR013762 Integrase-like, catalytic core VF_0448 IPR023009 Tyrosine recombinase XerC/XerD VF_0448 IPR023109 Integrase/recombinase, N-terminal VF_0449 IPR009094 Disulphide bond isomerase, DsbC, N-terminal VF_0449 IPR012336 Thioredoxin-like fold VF_0449 IPR017937 Thioredoxin, conserved site VF_0449 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VF_0450 IPR001667 DDH domain VF_0450 IPR003156 DHHA1 domain VF_0450 IPR004610 Bacterial RecJ exonuclease VF_0453 IPR002313 Lysine-tRNA ligase, class II VF_0453 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VF_0453 IPR012340 Nucleic acid-binding, OB-fold VF_0453 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal VF_0453 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like VF_0454 IPR002078 RNA polymerase sigma factor 54 interaction domain VF_0454 IPR002197 DNA binding HTH domain, Fis-type VF_0454 IPR003593 AAA+ ATPase domain VF_0454 IPR009057 Homeodomain-like VF_0454 IPR011006 CheY-like superfamily VF_0454 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VF_0454 IPR025944 Sigma-54 interaction domain, conserved site VF_0454 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0455 IPR004230 DNA mismatch repair protein MutH VF_0455 IPR011335 Restriction endonuclease type II-like VF_0455 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II VF_0456 IPR000086 NUDIX hydrolase domain VF_0456 IPR015797 NUDIX hydrolase domain-like VF_0456 IPR020084 NUDIX hydrolase, conserved site VF_0456 IPR020476 NUDIX hydrolase VF_0456 IPR022927 RNA pyrophosphohydrolase RppH VF_0457 IPR000121 PEP-utilising enzyme, C-terminal VF_0457 IPR003018 GAF domain VF_0457 IPR006318 Phosphoenolpyruvate-utilising enzyme VF_0457 IPR008279 PEP-utilising enzyme, mobile domain VF_0457 IPR008731 Phosphotransferase system, enzyme I N-terminal VF_0457 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VF_0457 IPR018274 PEP-utilising enzyme, active site VF_0457 IPR023151 PEP-utilising enzyme, conserved site VF_0457 IPR029016 GAF domain-like VF_0458 IPR002781 Transmembrane protein TauE like VF_0459 IPR001640 Prolipoprotein diacylglyceryl transferase VF_0460 IPR000398 Thymidylate synthase VF_0460 IPR020940 Thymidylate synthase, active site VF_0460 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain VF_0461 IPR003841 Sodium-dependent phosphate transport protein VF_0461 IPR030147 VF_0461 VF_0462 IPR000847 Transcription regulator HTH, LysR VF_0462 IPR005119 LysR, substrate-binding VF_0462 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0463 IPR001845 HTH ArsR-type DNA-binding domain VF_0463 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0464 IPR002583 Ribosomal protein S20 VF_0465 IPR004268 Flagellin assembly, membrane protein MviN VF_0466 IPR002606 Riboflavin kinase, bacterial VF_0466 IPR004821 Cytidyltransferase-like domain VF_0466 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0466 IPR015864 FAD synthetase VF_0466 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic VF_0466 IPR023465 Riboflavin kinase domain VF_0466 IPR023468 Riboflavin kinase VF_0467 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VF_0467 IPR002300 Aminoacyl-tRNA synthetase, class Ia VF_0467 IPR002301 Isoleucine-tRNA ligase VF_0467 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VF_0467 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VF_0467 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase VF_0467 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VF_0467 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0467 IPR023585 Isoleucine-tRNA ligase, type 1 VF_0468 IPR001872 Peptidase A8, signal peptidase II VF_0469 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VF_0469 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VF_0470 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase VF_0471 IPR000846 Dihydrodipicolinate reductase, N-terminal VF_0471 IPR016040 NAD(P)-binding domain VF_0471 IPR022663 Dihydrodipicolinate reductase, C-terminal VF_0471 IPR022664 Dihydrodipicolinate reductase, conserved site VF_0471 IPR023940 Dihydrodipicolinate reductase, bacterial VF_0472 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain VF_0472 IPR006274 Carbamoyl-phosphate synthase, small subunit VF_0472 IPR017926 Glutamine amidotransferase VF_0472 IPR029062 Class I glutamine amidotransferase-like VF_0473 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VF_0473 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain VF_0473 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain VF_0473 IPR006275 Carbamoyl-phosphate synthase, large subunit VF_0473 IPR011607 Methylglyoxal synthase-like domain VF_0473 IPR013815 ATP-grasp fold, subdomain 1 VF_0473 IPR013816 ATP-grasp fold, subdomain 2 VF_0473 IPR016185 Pre-ATP-grasp domain VF_0474 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C VF_0474 IPR012338 Beta-lactamase/transpeptidase-like VF_0475 IPR023614 Porin domain VF_0476 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VF_0476 IPR006359 Transcription elongation factor GreA VF_0476 IPR018151 Transcription elongation factor, GreA/GreB, conserved site VF_0476 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal VF_0476 IPR023459 Transcription elongation factor GreA/GreB family VF_0476 IPR028624 Transcription elongation factor GreA/GreB VF_0477 IPR001890 RNA-binding, CRM domain VF_0477 IPR017924 RNA-binding protein YhbY VF_0478 IPR002877 Ribosomal RNA methyltransferase FtsJ domain VF_0478 IPR015507 Ribosomal RNA large subunit methyltransferase E VF_0478 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0479 IPR000642 Peptidase M41 VF_0479 IPR003593 AAA+ ATPase domain VF_0479 IPR003959 ATPase, AAA-type, core VF_0479 IPR003960 ATPase, AAA-type, conserved site VF_0479 IPR005936 Peptidase, FtsH VF_0479 IPR011546 Peptidase M41, FtsH extracellular VF_0479 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0480 IPR000489 Pterin-binding VF_0480 IPR006390 Dihydropteroate synthase VF_0480 IPR011005 Dihydropteroate synthase-like VF_0481 IPR005841 Alpha-D-phosphohexomutase superfamily VF_0481 IPR005843 Alpha-D-phosphohexomutase, C-terminal VF_0481 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VF_0481 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VF_0481 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VF_0481 IPR006352 Phosphoglucosamine mutase VF_0481 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VF_0481 IPR016066 Alpha-D-phosphohexomutase, conserved site VF_0483 IPR004692 Preprotein translocase SecG subunit VF_0484 IPR003728 Ribosome maturation factor RimP VF_0484 IPR028989 Ribosome maturation factor RimP, N-terminal VF_0484 IPR028998 Ribosome maturation factor RimP, C-terminal VF_0485 IPR003029 Ribosomal protein S1, RNA-binding domain VF_0485 IPR009019 K homology domain, prokaryotic type VF_0485 IPR010213 Transcription termination factor NusA VF_0485 IPR010214 Transcription termination factor NusA, C-terminal duplication VF_0485 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical VF_0485 IPR012340 Nucleic acid-binding, OB-fold VF_0485 IPR013735 Transcription factor NusA, N-terminal VF_0485 IPR015946 K homology domain-like, alpha/beta VF_0485 IPR022967 RNA-binding domain, S1 VF_0485 IPR025249 KH domain, NusA-like VF_0485 IPR030842 VF_0485 VF_0486 IPR000178 Translation initiation factor aIF-2, bacterial-like VF_0486 IPR005225 Small GTP-binding protein domain VF_0486 IPR006847 Translation initiation factor IF-2, N-terminal VF_0486 IPR009000 Translation protein, beta-barrel domain VF_0486 IPR009061 DNA binding domain, putative VF_0486 IPR013575 Initiation factor 2 associated domain, bacterial VF_0486 IPR023115 Translation initiation factor IF- 2, domain 3 VF_0486 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0487 IPR000238 Ribosome-binding factor A VF_0487 IPR015946 K homology domain-like, alpha/beta VF_0487 IPR020053 Ribosome-binding factor A, conserved site VF_0487 IPR023799 Ribosome-binding factor A domain VF_0488 IPR002501 Pseudouridine synthase II VF_0488 IPR014780 tRNA pseudouridine synthase II, TruB VF_0488 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal VF_0488 IPR015947 PUA-like domain VF_0488 IPR020103 Pseudouridine synthase, catalytic domain VF_0488 IPR032819 VF_0488 VF_0489 IPR000589 Ribosomal protein S15 VF_0489 IPR005290 Ribosomal protein S15, bacterial-type VF_0489 IPR009068 S15/NS1, RNA-binding VF_0490 IPR001247 Exoribonuclease, phosphorolytic domain 1 VF_0490 IPR003029 Ribosomal protein S1, RNA-binding domain VF_0490 IPR004087 K Homology domain VF_0490 IPR004088 K Homology domain, type 1 VF_0490 IPR012162 Polyribonucleotide nucleotidyltransferase VF_0490 IPR012340 Nucleic acid-binding, OB-fold VF_0490 IPR015847 Exoribonuclease, phosphorolytic domain 2 VF_0490 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain VF_0490 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0490 IPR022967 RNA-binding domain, S1 VF_0490 IPR027408 PNPase/RNase PH domain VF_0491 IPR011990 Tetratricopeptide-like helical domain VF_0491 IPR019734 Tetratricopeptide repeat VF_0492 IPR001539 Peptidase U32 VF_0493 IPR001539 Peptidase U32 VF_0494 IPR000014 PAS domain VF_0494 IPR000160 GGDEF domain VF_0494 IPR001633 EAL domain VF_0494 IPR013656 PAS fold-4 VF_0494 IPR029787 Nucleotide cyclase VF_0495 IPR003033 SCP2 sterol-binding domain VF_0495 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VF_0496 IPR016181 Acyl-CoA N-acyltransferase VF_0498 IPR004615 DNA polymerase III, psi subunit VF_0499 IPR000182 GNAT domain VF_0499 IPR006464 Ribosomal-protein-alanine acetyltransferase VF_0499 IPR016181 Acyl-CoA N-acyltransferase VF_0500 IPR000795 Elongation factor, GTP-binding domain VF_0500 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VF_0500 IPR004548 Peptide chain release factor 3 VF_0500 IPR005225 Small GTP-binding protein domain VF_0500 IPR009000 Translation protein, beta-barrel domain VF_0500 IPR009022 Elongation factor G, III-V domain VF_0500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0500 IPR031157 VF_0500 VF_0500 IPR032090 VF_0500 VF_0501 IPR001130 TatD family VF_0501 IPR015991 Uncharacterised deoxyribonuclease TatD-type VF_0501 IPR018228 Deoxyribonuclease, TatD-related, conserved site VF_0501 IPR032466 VF_0501 VF_0502 IPR002668 Concentrative nucleoside transporter N-terminal domain VF_0502 IPR008276 Concentrative nucleoside transporter VF_0502 IPR011642 Nucleoside recognition Gate VF_0502 IPR011657 Concentrative nucleoside transporter C-terminal domain VF_0502 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VF_0503 IPR009872 Protein of unknown function DUF1427 VF_0503 IPR020017 XapX domain VF_0504 IPR002915 DeoC/FbaB/ lacD aldolase VF_0504 IPR011343 Deoxyribose-phosphate aldolase VF_0504 IPR013785 Aldolase-type TIM barrel VF_0504 IPR023649 Deoxyribose-phosphate aldolase type II VF_0505 IPR000053 Pyrimidine-nucleoside phosphorylase VF_0505 IPR000312 Glycosyl transferase, family 3 VF_0505 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal VF_0505 IPR013465 Thymidine phosphorylase VF_0505 IPR017459 Glycosyl transferase family 3, N-terminal domain VF_0505 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site VF_0505 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic VF_0506 IPR006124 Metalloenzyme VF_0506 IPR010045 Phosphopentomutase VF_0506 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VF_0506 IPR017850 Alkaline-phosphatase-like, core domain VF_0506 IPR024052 Phosphopentomutase DeoB cap domain VF_0507 IPR000845 Nucleoside phosphorylase domain VF_0507 IPR004402 Purine nucleoside phosphorylase DeoD-type VF_0507 IPR018016 Nucleoside phosphorylase, conserved site VF_0507 IPR018017 Nucleoside phosphorylase VF_0508 IPR019305 Uncharacterised protein family Smp VF_0509 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like VF_0509 IPR023190 Phosphoserine phosphatase, domain 2 VF_0509 IPR023214 HAD-like domain VF_0510 IPR007047 Flp/Fap pilin component VF_0511 IPR000045 Prepilin type IV endopeptidase, peptidase domain VF_0512 IPR017592 Pilus assembly, Flp-type CpaB VF_0512 IPR031571 VF_0512 VF_0513 IPR001775 GspD/PilQ family VF_0513 IPR004846 Type II/III secretion system VF_0513 IPR032789 VF_0513 VF_0515 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0516 IPR001482 Type II secretion system protein E VF_0516 IPR003593 AAA+ ATPase domain VF_0516 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0517 IPR018076 Type II secretion system F domain VF_0518 IPR018076 Type II secretion system F domain VF_0519 IPR011990 Tetratricopeptide-like helical domain VF_0519 IPR019734 Tetratricopeptide repeat VF_0521 IPR031582 VF_0521 VF_0522 IPR002035 von Willebrand factor, type A VF_0522 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VF_0523 IPR006664 Outer membrane protein, bacterial VF_0523 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VF_0524 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_0524 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_0525 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_0525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_0526 IPR001789 Signal transduction response regulator, receiver domain VF_0526 IPR001867 Signal transduction response regulator, C-terminal VF_0526 IPR011006 CheY-like superfamily VF_0526 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0526 IPR016032 Signal transduction response regulator, C-terminal effector VF_0527 IPR009875 PilZ domain VF_0528 IPR003593 AAA+ ATPase domain VF_0528 IPR004504 DNA repair protein RadA VF_0528 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_0528 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0528 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0529 IPR000640 Translation elongation factor EFG, V domain VF_0529 IPR000795 Elongation factor, GTP-binding domain VF_0529 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VF_0529 IPR004540 Translation elongation factor EFG/EF2 VF_0529 IPR005225 Small GTP-binding protein domain VF_0529 IPR005517 Translation elongation factor EFG/EF2, domain IV VF_0529 IPR009000 Translation protein, beta-barrel domain VF_0529 IPR009022 Elongation factor G, III-V domain VF_0529 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_0529 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0529 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0529 IPR031157 VF_0529 VF_0530 IPR003034 SAP domain VF_0530 IPR018668 Protein of unknown function DUF2132 VF_0531 IPR011059 Metal-dependent hydrolase, composite domain VF_0531 IPR013108 Amidohydrolase 3 VF_0531 IPR032466 VF_0531 VF_0532 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin VF_0532 IPR030191 VF_0532 VF_0533 IPR000873 AMP-dependent synthetase/ligase VF_0533 IPR020845 AMP-binding, conserved site VF_0534 IPR000432 DNA mismatch repair protein MutS, C-terminal VF_0534 IPR005748 DNA mismatch repair protein MutS, type 1 VF_0534 IPR007695 DNA mismatch repair protein MutS-like, N-terminal VF_0534 IPR007696 DNA mismatch repair protein MutS, core VF_0534 IPR007860 DNA mismatch repair protein MutS, connector domain VF_0534 IPR007861 DNA mismatch repair protein MutS, clamp VF_0534 IPR016151 DNA mismatch repair protein MutS, N-terminal VF_0534 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0535 IPR003593 AAA+ ATPase domain VF_0535 IPR013765 DNA recombination and repair protein RecA VF_0535 IPR020584 DNA recombination/repair protein RecA, conserved site VF_0535 IPR023400 DNA recombination and repair protein RecA, C-terminal VF_0535 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0536 IPR002318 Alanine-tRNA ligase, class IIc VF_0536 IPR003156 DHHA1 domain VF_0536 IPR009000 Translation protein, beta-barrel domain VF_0536 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VF_0536 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain VF_0536 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain VF_0536 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal VF_0536 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria VF_0537 IPR001048 Aspartate/glutamate/uridylate kinase VF_0537 IPR001341 Aspartate kinase domain VF_0537 IPR018042 Aspartate kinase, conserved site VF_0538 IPR003751 Carbon storage regulator VF_0539 IPR000089 Biotin/lipoyl attachment VF_0539 IPR000891 Pyruvate carboxyltransferase VF_0539 IPR001882 Biotin-binding site VF_0539 IPR003379 Carboxylase, conserved domain VF_0539 IPR005776 Oxaloacetate decarboxylase, alpha subunit VF_0539 IPR011053 Single hybrid motif VF_0539 IPR013785 Aldolase-type TIM barrel VF_0540 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit VF_0541 IPR020143 Uncharacterised protein family, RP436 VF_0541 IPR032816 VF_0541 VF_0541 IPR032818 VF_0541 VF_0542 IPR007863 Peptidase M16, C-terminal domain VF_0542 IPR011237 Peptidase M16 domain VF_0542 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VF_0542 IPR011765 Peptidase M16, N-terminal VF_0543 IPR006334 Glutamate--cysteine ligase, monofunctional VF_0543 IPR007370 Glutamate--cysteine ligase VF_0544 IPR023346 Lysozyme-like domain VF_0545 IPR003815 S-ribosylhomocysteinase (LuxS) VF_0545 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VF_0546 IPR000644 CBS domain VF_0546 IPR002550 Domain of unknown function DUF21 VF_0546 IPR005170 Transporter-associated domain VF_0546 IPR016166 FAD-binding, type 2 VF_0546 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 VF_0547 IPR002541 Cytochrome c assembly protein VF_0548 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VF_0548 IPR003593 AAA+ ATPase domain VF_0548 IPR004125 Signal recognition particle, SRP54 subunit, M-domain VF_0548 IPR004780 Signal recognition particle protein Ffh VF_0548 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle VF_0548 IPR022941 Signal recognition particle, SRP54 subunit VF_0548 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0549 IPR000307 Ribosomal protein S16 VF_0549 IPR020592 Ribosomal protein S16, conserved site VF_0549 IPR023803 Ribosomal protein S16 domain VF_0550 IPR002676 RimM protein VF_0550 IPR009000 Translation protein, beta-barrel domain VF_0550 IPR011033 PRC-barrel-like VF_0550 IPR011961 16S rRNA processing protein RimM VF_0550 IPR027275 PRC-barrel domain VF_0551 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria VF_0551 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain VF_0551 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal VF_0551 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VF_0551 IPR029028 Alpha/beta knot methyltransferases VF_0552 IPR001857 Ribosomal protein L19 VF_0552 IPR008991 Translation protein SH3-like domain VF_0552 IPR018257 Ribosomal protein L19, conserved site VF_0553 IPR006218 DAHP synthetase I/KDSA VF_0553 IPR006219 DHAP synthase, class 1 VF_0553 IPR013785 Aldolase-type TIM barrel VF_0554 IPR002701 Chorismate mutase VF_0554 IPR003099 Prephenate dehydrogenase VF_0554 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein VF_0554 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VF_0554 IPR011277 Chorismate mutase, T-protein VF_0554 IPR016040 NAD(P)-binding domain VF_0554 IPR020822 Chorismate mutase, type II VF_0555 IPR011055 Duplicated hybrid motif VF_0555 IPR016047 Peptidase M23 VF_0556 IPR009875 PilZ domain VF_0556 IPR027021 Cyclic di-GMP binding protein, PA4608 type VF_0557 IPR003439 ABC transporter-like VF_0557 IPR003593 AAA+ ATPase domain VF_0557 IPR017871 ABC transporter, conserved site VF_0557 IPR022374 ABC transporter, ATP-binding protein, ChvD VF_0557 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0557 IPR032781 VF_0557 VF_0558 IPR000189 Prokaryotic transglycosylase, active site VF_0558 IPR008258 Lytic transglycosylase-like SLT domain VF_0558 IPR008939 Lytic transglycosylase, superhelical U-shaped VF_0558 IPR012289 Lytic transglycosylase, superhelical linker VF_0558 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain VF_0558 IPR023346 Lysozyme-like domain VF_0559 IPR000831 Trp repressor VF_0559 IPR010921 Trp repressor/replication initiator VF_0559 IPR013335 Trp repressor, bacterial VF_0560 IPR002786 Non-canonical purine NTP phosphatase VF_0560 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VF_0560 IPR029001 Inosine triphosphate pyrophosphatase-like VF_0561 IPR001086 Prephenate dehydratase VF_0561 IPR002701 Chorismate mutase VF_0561 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase VF_0561 IPR010952 Chorismate mutase, gammaproteobacteria VF_0561 IPR018528 Prephenate dehydratase, conserved site VF_0561 IPR020822 Chorismate mutase, type II VF_0562 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein VF_0563 IPR011990 Tetratricopeptide-like helical domain VF_0563 IPR017689 Outer membrane protein assembly factor BamD VF_0564 IPR002942 RNA-binding S4 domain VF_0564 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VF_0564 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VF_0564 IPR006225 Pseudouridine synthase, RluC/RluD VF_0564 IPR020103 Pseudouridine synthase, catalytic domain VF_0565 IPR003730 Multi-copper polyphenol oxidoreductase, laccase VF_0565 IPR011324 Cytotoxic necrotizing factor-like, catalytic VF_0566 IPR001270 ClpA/B family VF_0566 IPR003593 AAA+ ATPase domain VF_0566 IPR003959 ATPase, AAA-type, core VF_0566 IPR004176 Clp, N-terminal VF_0566 IPR017730 Chaperonin ClpB VF_0566 IPR018368 ClpA/B, conserved site 1 VF_0566 IPR019489 Clp ATPase, C-terminal VF_0566 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0566 IPR028299 ClpA/B, conserved site 2 VF_0568 IPR012902 Prokaryotic N-terminal methylation site VF_0570 IPR016419 Prepilin peptidase-dependent protein B, predicted VF_0571 IPR012902 Prokaryotic N-terminal methylation site VF_0571 IPR016824 Tfp pilus assembly protein FimT VF_0571 IPR022346 General secretion pathway, GspH VF_0572 IPR012902 Prokaryotic N-terminal methylation site VF_0572 IPR031982 VF_0572 VF_0573 IPR003370 Chromate transporter VF_0573 IPR014047 Chromate transporter, long chain VF_0574 IPR000847 Transcription regulator HTH, LysR VF_0574 IPR005119 LysR, substrate-binding VF_0574 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0575 IPR000612 Proteolipid membrane potential modulator VF_0576 IPR001451 Bacterial transferase hexapeptide repeat VF_0576 IPR011004 Trimeric LpxA-like VF_0576 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria VF_0576 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family VF_0576 IPR032784 VF_0576 VF_0577 IPR009813 Uncharacterised protein family YebG VF_0578 IPR002680 Alternative oxidase VF_0579 IPR000847 Transcription regulator HTH, LysR VF_0579 IPR005119 LysR, substrate-binding VF_0579 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0580 IPR004695 Voltage-dependent anion channel VF_0581 IPR006697 Exodeoxyribonuclease V, gamma subunit VF_0581 IPR011335 Restriction endonuclease type II-like VF_0581 IPR013986 DExx box DNA helicase domain VF_0581 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0582 IPR000212 DNA helicase, UvrD/REP type VF_0582 IPR004586 Exodeoxyribonuclease V, beta subunit VF_0582 IPR011335 Restriction endonuclease type II-like VF_0582 IPR011604 Exonuclease, phage-type/RecB, C-terminal VF_0582 IPR014016 UvrD-like Helicase, ATP-binding domain VF_0582 IPR014017 DNA helicase, UvrD-like, C-terminal VF_0582 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0583 IPR006344 Exodeoxyribonuclease V, alpha subunit VF_0583 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0583 IPR027785 UvrD-like helicase C-terminal domain VF_0584 IPR000390 Small multidrug resistance protein family VF_0585 IPR000182 GNAT domain VF_0585 IPR001048 Aspartate/glutamate/uridylate kinase VF_0585 IPR010167 Amino-acid N-acetyltransferase (ArgA) VF_0585 IPR016181 Acyl-CoA N-acyltransferase VF_0586 IPR021271 Protein of unknown function DUF2850 VF_0587 IPR005300 Lytic transglycosylase MltA VF_0587 IPR009009 RlpA-like double-psi beta-barrel domain VF_0587 IPR010611 3D domain VF_0588 IPR000594 UBA/THIF-type NAD/FAD binding fold VF_0588 IPR016040 NAD(P)-binding domain VF_0589 IPR003808 Fe-S metabolism associated domain, SufE-like VF_0589 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VF_0590 IPR000192 Aminotransferase class V domain VF_0590 IPR010970 Cysteine desulfurase, SufS VF_0590 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_0590 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_0590 IPR015424 Pyridoxal phosphate-dependent transferase VF_0590 IPR016454 Cysteine desulfurase, NifS VF_0591 IPR000847 Transcription regulator HTH, LysR VF_0591 IPR005119 LysR, substrate-binding VF_0591 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0592 IPR006696 Protein of unknown function DUF423 VF_0593 IPR002877 Ribosomal RNA methyltransferase FtsJ domain VF_0593 IPR011224 Ribosomal RNA large subunit methyltransferase M VF_0593 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0594 IPR002421 5'-3' exonuclease, N-terminal VF_0594 IPR008918 Helix-hairpin-helix motif, class 2 VF_0594 IPR020045 5'-3' exonuclease, C-terminal domain VF_0594 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal VF_0594 IPR022895 Flap endonuclease Xni VF_0594 IPR029060 PIN domain-like VF_0595 IPR021826 Protein of unknown function DUF3412 VF_0595 IPR027820 Domain of unknown function DUF4478 VF_0595 IPR031100 VF_0595 VF_0596 IPR000160 GGDEF domain VF_0596 IPR029787 Nucleotide cyclase VF_0597 IPR011990 Tetratricopeptide-like helical domain VF_0597 IPR019734 Tetratricopeptide repeat VF_0598 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 VF_0598 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal VF_0598 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF VF_0599 IPR009948 Syd VF_0600 IPR016908 Uncharacterised conserved protein UCP029037 VF_0601 IPR003791 Protein of unknown function UPF0178 VF_0603 IPR003352 Phosphotransferase system, EIIC VF_0603 IPR004501 Phosphotransferase system, EIIC component, type 3 VF_0603 IPR004796 Phosphotransferase system, cellobiose-type IIC component VF_0604 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VF_0605 IPR001360 Glycoside hydrolase, family 1 VF_0605 IPR013781 Glycoside hydrolase, catalytic domain VF_0605 IPR017853 Glycoside hydrolase, superfamily VF_0605 IPR018120 Glycoside hydrolase, family 1, active site VF_0605 IPR033132 VF_0605 VF_0606 IPR000600 ROK VF_0607 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit VF_0608 IPR000843 Transcription regulator HTH, LacI VF_0608 IPR010982 Lambda repressor-like, DNA-binding domain VF_0608 IPR028082 Periplasmic binding protein-like I VF_0609 IPR003192 Porin, LamB type VF_0610 IPR021732 Protein of unknown function DUF3301 VF_0611 IPR021936 Protein of unknown function DUF3549 VF_0612 IPR007384 Protein of unknown function UCP006257 VF_0612 IPR023376 YqcC-like domain VF_0613 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VF_0613 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VF_0613 IPR020103 Pseudouridine synthase, catalytic domain VF_0614 IPR000760 Inositol monophosphatase VF_0614 IPR020583 Inositol monophosphatase, metal-binding site VF_0614 IPR022337 Inositol monophosphatase, SuhB VF_0615 IPR001537 tRNA/rRNA methyltransferase, SpoU type VF_0615 IPR004384 RNA methyltransferase TrmH, group 1 VF_0615 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VF_0615 IPR029028 Alpha/beta knot methyltransferases VF_0616 IPR000944 Transcription regulator Rrf2-like VF_0616 IPR010242 Transcription factor HTH, IscR VF_0616 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0616 IPR030489 VF_0616 VF_0617 IPR000192 Aminotransferase class V domain VF_0617 IPR010240 Cysteine desulfurase VF_0617 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_0617 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_0617 IPR015424 Pyridoxal phosphate-dependent transferase VF_0617 IPR016454 Cysteine desulfurase, NifS VF_0617 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site VF_0618 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal VF_0618 IPR011339 ISC system FeS cluster assembly, IscU scaffold VF_0619 IPR000361 FeS cluster biogenesis VF_0619 IPR011302 ISC system FeS cluster assembly, IscA scaffold VF_0619 IPR016092 FeS cluster insertion protein VF_0619 IPR017870 FeS cluster insertion, C-terminal, conserved site VF_0619 IPR031108 VF_0619 VF_0620 IPR001623 DnaJ domain VF_0620 IPR004640 Co-chaperone Hsc20 VF_0620 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain VF_0621 IPR010236 ISC system FeS cluster assembly, HscA chaperone VF_0621 IPR013126 Heat shock protein 70 family VF_0621 IPR018181 Heat shock protein 70, conserved site VF_0621 IPR029047 Heat shock protein 70kD, peptide-binding domain VF_0621 IPR029048 Heat shock protein 70kD, C-terminal domain VF_0622 IPR001041 2Fe-2S ferredoxin-type domain VF_0622 IPR001055 Adrenodoxin VF_0622 IPR011536 Ferredoxin, 2Fe-2S type VF_0622 IPR012675 Beta-grasp domain VF_0622 IPR018298 Adrenodoxin, iron-sulphur binding site VF_0623 IPR007479 ISC system FeS cluster assembly, IscX VF_0624 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal VF_0624 IPR008330 Peptidase M17, peptidase B VF_0624 IPR011356 Leucine aminopeptidase/peptidase B VF_0625 IPR001564 Nucleoside diphosphate kinase VF_0626 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr VF_0626 IPR007197 Radical SAM VF_0626 IPR013785 Aldolase-type TIM barrel VF_0626 IPR027492 Dual-specificity RNA methyltransferase RlmN VF_0627 IPR011990 Tetratricopeptide-like helical domain VF_0627 IPR013360 Pilus biogenesis/stability type IV, PilW VF_0627 IPR019734 Tetratricopeptide repeat VF_0628 IPR010982 Lambda repressor-like, DNA-binding domain VF_0628 IPR025194 Domain of unknown function DUF4115 VF_0629 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type VF_0629 IPR011005 Dihydropteroate synthase-like VF_0629 IPR013785 Aldolase-type TIM barrel VF_0629 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial VF_0630 IPR004154 Anticodon-binding VF_0630 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit VF_0630 IPR015807 Histidine-tRNA ligase VF_0631 IPR011990 Tetratricopeptide-like helical domain VF_0631 IPR018704 Domain of unknown function DUF09976 VF_0631 IPR026039 Uncharacterised protein family UPF0070 VF_0632 IPR002372 Pyrrolo-quinoline quinone repeat VF_0632 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily VF_0632 IPR017687 Outer membrane protein assembly factor BamB VF_0632 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VF_0632 IPR027295 Quinonprotein alcohol dehydrogenase-like domain VF_0633 IPR005225 Small GTP-binding protein domain VF_0633 IPR006073 GTP binding domain VF_0633 IPR015946 K homology domain-like, alpha/beta VF_0633 IPR016484 GTP-binding protein EngA VF_0633 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0633 IPR032859 VF_0633 VF_0634 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain VF_0635 IPR010807 Protein of unknown function DUF1407 VF_0635 IPR029037 YfgJ-like VF_0636 IPR003753 Exonuclease VII, large subunit VF_0636 IPR020579 Exonuclease VII, large subunit, C-terminal VF_0636 IPR025824 OB-fold nucleic acid binding domain VF_0637 IPR000644 CBS domain VF_0637 IPR001093 IMP dehydrogenase/GMP reductase VF_0637 IPR005990 Inosine-5'-monophosphate dehydrogenase VF_0637 IPR013785 Aldolase-type TIM barrel VF_0637 IPR015875 IMP dehydrogenase / GMP reductase, conserved site VF_0638 IPR001674 GMP synthase, C-terminal VF_0638 IPR004739 GMP synthase, N-terminal VF_0638 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0638 IPR017926 Glutamine amidotransferase VF_0638 IPR022310 NAD/GMP synthase VF_0638 IPR022955 GMP synthase VF_0638 IPR029062 Class I glutamine amidotransferase-like VF_0639 IPR004697 AbgT VF_0640 IPR013559 YheO-like VF_0641 IPR005130 Serine dehydratase-like, alpha subunit VF_0641 IPR021144 Uncharacterised protein family UPF0597 VF_0642 IPR006056 Enamine/imine deaminase YjgF-like VF_0642 IPR006175 YjgF/Yer057p/UK114 family VF_0642 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VF_0644 IPR000801 Putative esterase VF_0644 IPR014186 S-formylglutathione hydrolase VF_0644 IPR029058 Alpha/Beta hydrolase fold VF_0645 IPR002085 Alcohol dehydrogenase superfamily, zinc-type VF_0645 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site VF_0645 IPR011032 GroES (chaperonin 10)-like VF_0645 IPR013149 Alcohol dehydrogenase, C-terminal VF_0645 IPR013154 Alcohol dehydrogenase GroES-like VF_0645 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase VF_0645 IPR016040 NAD(P)-binding domain VF_0645 IPR020843 Polyketide synthase, enoylreductase VF_0646 IPR001853 DSBA-like thioredoxin domain VF_0646 IPR012336 Thioredoxin-like fold VF_0646 IPR017937 Thioredoxin, conserved site VF_0646 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VF_0647 IPR001991 Sodium:dicarboxylate symporter VF_0648 IPR002085 Alcohol dehydrogenase superfamily, zinc-type VF_0648 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site VF_0648 IPR011032 GroES (chaperonin 10)-like VF_0648 IPR013149 Alcohol dehydrogenase, C-terminal VF_0648 IPR013154 Alcohol dehydrogenase GroES-like VF_0648 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase VF_0648 IPR016040 NAD(P)-binding domain VF_0648 IPR020843 Polyketide synthase, enoylreductase VF_0649 IPR000847 Transcription regulator HTH, LysR VF_0649 IPR005119 LysR, substrate-binding VF_0649 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0650 IPR016192 APOBEC/CMP deaminase, zinc-binding VF_0650 IPR016193 Cytidine deaminase-like VF_0650 IPR028883 tRNA-specific adenosine deaminase VF_0651 IPR000189 Prokaryotic transglycosylase, active site VF_0651 IPR001638 Extracellular solute-binding protein, family 3 VF_0651 IPR008258 Lytic transglycosylase-like SLT domain VF_0651 IPR023346 Lysozyme-like domain VF_0651 IPR023703 Membrane-bound lytic murein transglycosylase F VF_0652 IPR010073 Phosphoribosylformylglycinamidine synthase VF_0652 IPR010918 AIR synthase-related protein, C-terminal domain VF_0652 IPR016188 PurM, N-terminal-like VF_0652 IPR029062 Class I glutamine amidotransferase-like VF_0653 IPR001537 tRNA/rRNA methyltransferase, SpoU type VF_0653 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VF_0653 IPR029028 Alpha/beta knot methyltransferases VF_0654 IPR022069 Protein of unknown function DUF3622 VF_0655 IPR001223 Glycoside hydrolase, family 18, catalytic domain VF_0655 IPR001579 Glycoside hydrolase, chitinase active site VF_0655 IPR003610 Carbohydrate-binding module family 5/12 VF_0655 IPR011583 Chitinase II VF_0655 IPR013781 Glycoside hydrolase, catalytic domain VF_0655 IPR017853 Glycoside hydrolase, superfamily VF_0656 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal VF_0657 IPR007036 Succinylglutamate desuccinylase/aspartoacylase VF_0658 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX VF_0658 IPR013651 ATP-grasp fold, RimK-type VF_0658 IPR013815 ATP-grasp fold, subdomain 1 VF_0658 IPR013816 ATP-grasp fold, subdomain 2 VF_0658 IPR016185 Pre-ATP-grasp domain VF_0658 IPR023533 Ribosomal S6 modification enzyme RimK VF_0659 IPR021109 Aspartic peptidase domain VF_0660 IPR000175 Sodium:neurotransmitter symporter VF_0661 IPR025346 Protein of unknown function DUF4250 VF_0662 IPR009624 Uncharacterised protein family UPF0253 VF_0663 IPR002220 DapA-like VF_0663 IPR013785 Aldolase-type TIM barrel VF_0663 IPR020624 Dihydrodipicolinate synthetase, conserved site VF_0664 IPR000281 Helix-turn-helix protein RpiR VF_0664 IPR001347 Sugar isomerase (SIS) VF_0664 IPR009057 Homeodomain-like VF_0664 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0665 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VF_0665 IPR006680 Amidohydrolase 1 VF_0665 IPR011059 Metal-dependent hydrolase, composite domain VF_0665 IPR032466 VF_0665 VF_0666 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase VF_0666 IPR011060 Ribulose-phosphate binding barrel VF_0666 IPR013785 Aldolase-type TIM barrel VF_0667 IPR000600 ROK VF_0668 IPR001734 Sodium/solute symporter VF_0669 IPR004375 Conserved hypothetical protein CHP00022 VF_0670 IPR003495 CobW/HypB/UreG domain VF_0670 IPR004400 Urease accessory protein UreG VF_0670 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0671 IPR002639 Urease accessory protein UreF VF_0672 IPR004029 UreE urease accessory, N-terminal VF_0672 IPR007864 Urease accessory protein UreE, C-terminal domain VF_0672 IPR012406 Urease accessory protein UreE VF_0673 IPR005848 Urease, alpha subunit VF_0673 IPR006680 Amidohydrolase 1 VF_0673 IPR011059 Metal-dependent hydrolase, composite domain VF_0673 IPR011612 Urease alpha-subunit, N-terminal domain VF_0673 IPR017950 Urease active site VF_0673 IPR029754 Urease nickel binding site VF_0673 IPR032466 VF_0673 VF_0674 IPR002019 Urease, beta subunit VF_0675 IPR002026 Urease, gamma/gamma-beta subunit VF_0675 IPR012010 Urease, gamma subunit VF_0676 IPR002669 Urease accessory protein UreD VF_0677 IPR003439 ABC transporter-like VF_0677 IPR003593 AAA+ ATPase domain VF_0677 IPR017871 ABC transporter, conserved site VF_0677 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0678 IPR003439 ABC transporter-like VF_0678 IPR003593 AAA+ ATPase domain VF_0678 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0679 IPR000515 MetI-like domain VF_0680 IPR000515 MetI-like domain VF_0681 IPR000914 Bacterial extracellular solute-binding protein, family 5 VF_0681 IPR030678 VF_0681 VF_0682 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain VF_0682 IPR002316 Proline-tRNA ligase, class IIa VF_0682 IPR004154 Anticodon-binding VF_0682 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type VF_0682 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VF_0682 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 VF_0683 IPR023368 Uncharacterised protein family UPF0066, conserved site VF_0683 IPR023370 TsaA-like domain VF_0684 IPR004872 Lipoprotein NlpA family VF_0685 IPR000515 MetI-like domain VF_0686 IPR003439 ABC transporter-like VF_0686 IPR003593 AAA+ ATPase domain VF_0686 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria VF_0686 IPR017871 ABC transporter, conserved site VF_0686 IPR018449 NIL domain VF_0686 IPR026253 Methionine import ATP-binding protein MetN VF_0686 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0687 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase VF_0687 IPR006543 Histidinol-phosphate phosphatase VF_0687 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VF_0687 IPR023214 HAD-like domain VF_0688 IPR000515 MetI-like domain VF_0689 IPR000515 MetI-like domain VF_0690 IPR000914 Bacterial extracellular solute-binding protein, family 5 VF_0690 IPR030678 VF_0690 VF_0691 IPR003439 ABC transporter-like VF_0691 IPR003593 AAA+ ATPase domain VF_0691 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VF_0691 IPR017871 ABC transporter, conserved site VF_0691 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0692 IPR003439 ABC transporter-like VF_0692 IPR003593 AAA+ ATPase domain VF_0692 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VF_0692 IPR017871 ABC transporter, conserved site VF_0692 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0693 IPR018660 C-type lysozyme, inhibitor VF_0694 IPR003740 Membrane Protein of unknown function DUF161 VF_0695 IPR001085 Serine hydroxymethyltransferase VF_0695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_0695 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_0695 IPR015424 Pyridoxal phosphate-dependent transferase VF_0695 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site VF_0696 IPR025385 Domain of unknown function DUF4092 VF_0696 IPR031161 VF_0696 VF_0698 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_0698 IPR013587 Nitrate/nitrite sensing protein VF_0699 IPR003796 Ribonucleotide reductase regulator NrdR-like VF_0699 IPR005144 ATP-cone VF_0700 IPR002125 CMP/dCMP deaminase, zinc-binding VF_0700 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal VF_0700 IPR004794 Riboflavin biosynthesis protein RibD VF_0700 IPR011549 Riboflavin-specific deaminase, C-terminal VF_0700 IPR016192 APOBEC/CMP deaminase, zinc-binding VF_0700 IPR016193 Cytidine deaminase-like VF_0700 IPR024072 Dihydrofolate reductase-like domain VF_0701 IPR001783 Lumazine-binding protein VF_0701 IPR017938 Riboflavin synthase-like beta-barrel VF_0701 IPR023366 ATP synthase subunit alpha-like domain VF_0701 IPR026017 Lumazine-binding domain VF_0702 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB VF_0702 IPR017945 DHBP synthase RibB-like alpha/beta domain VF_0702 IPR032677 VF_0702 VF_0703 IPR002180 6,7-dimethyl-8-ribityllumazine synthase VF_0704 IPR006027 NusB/RsmB/TIM44 VF_0704 IPR011605 NusB antitermination factor VF_0705 IPR006283 Thiamine-monophosphate kinase VF_0705 IPR010918 AIR synthase-related protein, C-terminal domain VF_0705 IPR016188 PurM, N-terminal-like VF_0706 IPR007686 YutG/PgpA domain VF_0706 IPR026037 Phosphatidylglycerophosphatase A VF_0706 IPR027416 YutG-like domain VF_0707 IPR025997 Periplasmic binding protein domain VF_0707 IPR028082 Periplasmic binding protein-like I VF_0708 IPR001789 Signal transduction response regulator, receiver domain VF_0708 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_0708 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_0708 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_0708 IPR011006 CheY-like superfamily VF_0708 IPR015387 LuxQ, periplasmic VF_0708 IPR029151 Periplasmic sensor domain-like VF_0710 IPR007138 Antibiotic biosynthesis monooxygenase-like domain VF_0710 IPR011008 Dimeric alpha-beta barrel VF_0711 IPR005474 Transketolase, N-terminal VF_0711 IPR005475 Transketolase-like, pyrimidine-binding domain VF_0711 IPR005477 Deoxyxylulose-5-phosphate synthase VF_0711 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II VF_0711 IPR020826 Transketolase binding site VF_0711 IPR029061 Thiamin diphosphate-binding fold VF_0711 IPR033247 VF_0711 VF_0711 IPR033248 VF_0711 VF_0712 IPR000092 Polyprenyl synthetase VF_0712 IPR008949 Terpenoid synthase VF_0712 IPR017446 Polyprenyl synthetase-related VF_0713 IPR003761 Exonuclease VII, small subunit VF_0714 IPR000540 Flagellar motor protein MotA, conserved site VF_0714 IPR002898 MotA/TolQ/ExbB proton channel VF_0714 IPR022522 Flagellar motor stator, MotA VF_0715 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VF_0715 IPR025713 Motility protein B, N-terminal domain VF_0716 IPR001763 Rhodanese-like domain VF_0716 IPR003720 tRNA sulfurtransferase ThiI VF_0716 IPR004114 THUMP VF_0716 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0716 IPR020536 Thil, AANH domain VF_0716 IPR026340 Thiazole biosynthesis domain VF_0717 IPR002818 ThiJ/PfpI VF_0717 IPR006287 DJ-1 VF_0717 IPR029062 Class I glutamine amidotransferase-like VF_0718 IPR003710 Ketopantoate reductase ApbA/PanE VF_0718 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VF_0718 IPR013328 Dehydrogenase, multihelical VF_0718 IPR013332 Ketopantoate reductase, N-terminal domain VF_0718 IPR013752 Ketopantoate reductase, C-terminal domain VF_0718 IPR016040 NAD(P)-binding domain VF_0719 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like VF_0720 IPR011701 Major facilitator superfamily VF_0720 IPR020846 Major facilitator superfamily domain VF_0721 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VF_0721 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VF_0721 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase VF_0721 IPR029000 Cyclophilin-like domain VF_0722 IPR005619 Uncharacterised protein family, YajG VF_0722 IPR020600 Inosine monophosphate cyclohydrolase-like VF_0723 IPR007848 Methyltransferase small domain VF_0723 IPR013675 Methyltransferase small, N-terminal VF_0723 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD VF_0723 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0724 IPR002634 BolA protein VF_0725 IPR008703 NADH-quinone reductase, Na(+)-translocating, subunit A VF_0725 IPR022615 NADH-quinone reductase, Na(+)-translocating, subunit A, C-terminal VF_0726 IPR004338 NADH-quinone reductase NQR2/RnfD VF_0726 IPR010966 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit VF_0727 IPR007329 FMN-binding VF_0727 IPR010204 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit VF_0728 IPR003667 Electron transport complex, Rnf/Nqr VF_0728 IPR011292 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit VF_0729 IPR003667 Electron transport complex, Rnf/Nqr VF_0729 IPR010967 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit VF_0731 IPR001041 2Fe-2S ferredoxin-type domain VF_0731 IPR001433 Oxidoreductase FAD/NAD(P)-binding VF_0731 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VF_0731 IPR008333 Oxidoreductase, FAD-binding domain VF_0731 IPR010205 NADH-quinone reductase, Na(+)-translocating, F subunit VF_0731 IPR012675 Beta-grasp domain VF_0731 IPR017938 Riboflavin synthase-like beta-barrel VF_0732 IPR003374 ApbE-like domain VF_0732 IPR024932 Flavin transferase ApbE VF_0733 IPR007495 Protein of unknown function DUF539 VF_0734 IPR001126 DNA-repair protein, UmuC-like VF_0734 IPR017961 DNA polymerase, Y-family, little finger domain VF_0734 IPR022880 DNA polymerase IV VF_0735 IPR000821 Alanine racemase VF_0735 IPR001608 Alanine racemase, N-terminal VF_0735 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VF_0735 IPR011079 Alanine racemase, C-terminal VF_0735 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site VF_0735 IPR029066 PLP-binding barrel VF_0736 IPR001160 Peptidase M20C, Xaa-His dipeptidase VF_0736 IPR002933 Peptidase M20 VF_0736 IPR011650 Peptidase M20, dimerisation domain VF_0737 IPR006043 Xanthine/uracil/vitamin C permease VF_0737 IPR026033 Purine permease PbuG-like VF_0737 IPR029940 VF_0737 VF_0738 IPR000836 Phosphoribosyltransferase domain VF_0738 IPR023747 Xanthine-guanine phosphoribosyltransferase VF_0738 IPR029057 Phosphoribosyltransferase-like VF_0739 IPR010520 Protein of unknown function DUF1100, hydrolase-like VF_0739 IPR029058 Alpha/Beta hydrolase fold VF_0740 IPR001048 Aspartate/glutamate/uridylate kinase VF_0740 IPR001057 Glutamate/acetylglutamate kinase VF_0740 IPR002478 PUA domain VF_0740 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase VF_0740 IPR011529 Glutamate 5-kinase VF_0740 IPR015947 PUA-like domain VF_0740 IPR019797 Glutamate 5-kinase, conserved site VF_0741 IPR000965 Gamma-glutamyl phosphate reductase GPR VF_0741 IPR012134 Glutamate-5-semialdehyde dehydrogenase VF_0741 IPR015590 Aldehyde dehydrogenase domain VF_0741 IPR016161 Aldehyde/histidinol dehydrogenase VF_0741 IPR016162 Aldehyde dehydrogenase, N-terminal VF_0741 IPR016163 Aldehyde dehydrogenase, C-terminal VF_0741 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site VF_0742 IPR003698 Lipoyl synthase VF_0742 IPR006638 Elongator protein 3/MiaB/NifB VF_0742 IPR007197 Radical SAM VF_0742 IPR013785 Aldolase-type TIM barrel VF_0742 IPR031691 VF_0742 VF_0743 IPR000544 Octanoyltransferase VF_0743 IPR004143 Biotin/lipoate A/B protein ligase VF_0743 IPR020605 Octanoyltransferase, conserved site VF_0744 IPR007454 Uncharacterised protein family UPF0250 VF_0744 IPR027471 YbeD-like domain VF_0745 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal VF_0745 IPR012338 Beta-lactamase/transpeptidase-like VF_0745 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal VF_0745 IPR015956 Penicillin-binding protein-associated VF_0745 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A VF_0746 IPR007730 Sporulation-related domain VF_0746 IPR009009 RlpA-like double-psi beta-barrel domain VF_0746 IPR012997 Rare lipoprotein A, bacterial VF_0747 IPR001182 Cell cycle protein FtsW/RodA VF_0747 IPR011923 Rod shape-determining protein RodA VF_0747 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VF_0748 IPR001460 Penicillin-binding protein, transpeptidase VF_0748 IPR005311 Penicillin-binding protein, dimerisation domain VF_0748 IPR012338 Beta-lactamase/transpeptidase-like VF_0748 IPR017790 Penicillin-binding protein 2 VF_0749 IPR003742 SPOUT methyltransferase, predicted VF_0749 IPR016051 Ribosomal RNA large subunit methyltransferase H VF_0749 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VF_0749 IPR029028 Alpha/beta knot methyltransferases VF_0750 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VF_0751 IPR005790 DNA polymerase III, delta subunit VF_0751 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VF_0751 IPR010372 DNA polymerase III, delta VF_0751 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0751 IPR032780 VF_0751 VF_0752 IPR007485 Lipopolysaccharide assembly, LptE VF_0753 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VF_0753 IPR002300 Aminoacyl-tRNA synthetase, class Ia VF_0753 IPR002302 Leucine-tRNA ligase VF_0753 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain VF_0753 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VF_0753 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding VF_0753 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0753 IPR025709 Leucyl-tRNA synthetase, editing domain VF_0754 IPR009912 Protein of unknown function DUF1451 VF_0755 IPR003010 Carbon-nitrogen hydrolase VF_0755 IPR004563 Apolipoprotein N-acyltransferase VF_0756 IPR000644 CBS domain VF_0756 IPR005170 Transporter-associated domain VF_0756 IPR016166 FAD-binding, type 2 VF_0756 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 VF_0757 IPR002036 Endoribonuclease YbeY VF_0757 IPR020549 Endoribonuclease YbeY, conserved site VF_0757 IPR023091 Metalloprotease catalytic domain, predicted VF_0758 IPR003714 PhoH-like protein VF_0758 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0759 IPR002792 TRAM domain VF_0759 IPR005839 Methylthiotransferase VF_0759 IPR006463 tRNA-i(6)A37 modification enzyme MiaB VF_0759 IPR006638 Elongator protein 3/MiaB/NifB VF_0759 IPR007197 Radical SAM VF_0759 IPR013848 Methylthiotransferase, N-terminal VF_0759 IPR020612 Methylthiotransferase, conserved site VF_0759 IPR023404 Radical SAM, alpha/beta horseshoe VF_0759 IPR023970 Methylthiotransferase/radical SAM-type protein VF_0760 IPR002938 Monooxygenase, FAD-binding VF_0760 IPR006076 FAD dependent oxidoreductase VF_0760 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 VF_0760 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_0762 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 VF_0762 IPR006073 GTP binding domain VF_0762 IPR012675 Beta-grasp domain VF_0762 IPR012676 TGS-like VF_0762 IPR013029 Domain of unknown function DUF933 VF_0762 IPR023192 TGS-like domain VF_0762 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0763 IPR001328 Peptidyl-tRNA hydrolase VF_0763 IPR018171 Peptidyl-tRNA hydrolase, conserved site VF_0764 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site VF_0764 IPR005946 Ribose-phosphate diphosphokinase VF_0764 IPR029057 Phosphoribosyltransferase-like VF_0764 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain VF_0765 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase VF_0765 IPR006204 GHMP kinase N-terminal domain VF_0765 IPR013750 GHMP kinase, C-terminal domain VF_0765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_0765 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0766 IPR004565 Outer membrane lipoprotein LolB VF_0766 IPR029046 Lipoprotein localisation LolA/LolB/LppX VF_0767 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase VF_0767 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VF_0767 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal VF_0767 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain VF_0767 IPR016040 NAD(P)-binding domain VF_0767 IPR018214 Glutamyl-tRNA reductase, conserved site VF_0768 IPR000352 Peptide chain release factor class I/class II VF_0768 IPR004373 Peptide chain release factor 1 VF_0768 IPR005139 Peptide chain release factor VF_0768 IPR014720 Double-stranded RNA-binding domain VF_0769 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VF_0769 IPR004556 Modification methylase HemK VF_0769 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific VF_0769 IPR025714 Methyltransferase domain VF_0769 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0770 IPR007360 Invasion gene expression up-regulator, SirB VF_0771 IPR011990 Tetratricopeptide-like helical domain VF_0771 IPR032698 VF_0771 VF_0772 IPR006218 DAHP synthetase I/KDSA VF_0772 IPR006269 3-deoxy-8-phosphooctulonate synthase VF_0772 IPR013785 Aldolase-type TIM barrel VF_0773 IPR000878 Tetrapyrrole methylase VF_0773 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site VF_0773 IPR006366 Uroporphyrin-III C-methyltransferase VF_0773 IPR014776 Tetrapyrrole methylase, subdomain 2 VF_0773 IPR014777 Tetrapyrrole methylase, subdomain 1 VF_0774 IPR000292 Formate/nitrite transporter VF_0774 IPR023271 Aquaporin-like VF_0775 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD VF_0775 IPR017941 Rieske [2Fe-2S] iron-sulphur domain VF_0776 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain VF_0776 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site VF_0776 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain VF_0776 IPR007419 BFD-like [2Fe-2S]-binding domain VF_0776 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB VF_0776 IPR017121 Nitrite reductase [NAD(P)H], large subunit VF_0776 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_0777 IPR003660 HAMP linker domain VF_0777 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_0777 IPR029151 Periplasmic sensor domain-like VF_0777 IPR033479 VF_0777 VF_0778 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VF_0778 IPR006146 5'-Nucleotidase, conserved site VF_0778 IPR006179 5'-Nucleotidase/apyrase VF_0778 IPR008334 5'-Nucleotidase, C-terminal VF_0778 IPR029052 Metallo-dependent phosphatase-like VF_0779 IPR002625 Smr protein/MutS2 C-terminal VF_0780 IPR007332 Protein of unknown function DUF411 VF_0780 IPR012336 Thioredoxin-like fold VF_0781 IPR001757 Cation-transporting P-type ATPase VF_0781 IPR006121 Heavy metal-associated domain, HMA VF_0781 IPR008250 P-type ATPase, A domain VF_0781 IPR017969 Heavy-metal-associated, conserved site VF_0781 IPR018303 P-type ATPase, phosphorylation site VF_0781 IPR023214 HAD-like domain VF_0781 IPR023299 P-type ATPase, cytoplasmic domain N VF_0781 IPR027256 Cation-transporting P-type ATPase, subfamily IB VF_0782 IPR000551 MerR-type HTH domain VF_0782 IPR009061 DNA binding domain, putative VF_0782 IPR011789 Cu(I)-responsive transcriptional regulator VF_0782 IPR015358 Transcription regulator MerR, DNA binding VF_0783 IPR005746 Thioredoxin VF_0783 IPR011990 Tetratricopeptide-like helical domain VF_0783 IPR012336 Thioredoxin-like fold VF_0783 IPR013766 Thioredoxin domain VF_0784 IPR002347 Glucose/ribitol dehydrogenase VF_0784 IPR016040 NAD(P)-binding domain VF_0784 IPR020904 Short-chain dehydrogenase/reductase, conserved site VF_0785 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain VF_0786 IPR000515 MetI-like domain VF_0787 IPR000644 CBS domain VF_0787 IPR003439 ABC transporter-like VF_0787 IPR003593 AAA+ ATPase domain VF_0787 IPR005892 Glycine betaine transport ATP-binding subunit VF_0787 IPR017871 ABC transporter, conserved site VF_0787 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0788 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VF_0788 IPR010099 Sugar nucleotide epimerase YfcH,-like putative VF_0788 IPR013549 Domain of unknown function DUF1731 VF_0788 IPR016040 NAD(P)-binding domain VF_0789 IPR000979 Phosphodiesterase MJ0936/Vps29 VF_0789 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type VF_0789 IPR029052 Metallo-dependent phosphatase-like VF_0791 IPR001867 Signal transduction response regulator, C-terminal VF_0791 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0791 IPR016032 Signal transduction response regulator, C-terminal effector VF_0792 IPR001404 Heat shock protein Hsp90 family VF_0792 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_0792 IPR019805 Heat shock protein Hsp90, conserved site VF_0792 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0792 IPR020575 Heat shock protein Hsp90, N-terminal VF_0793 IPR000850 Adenylate kinase/UMP-CMP kinase VF_0793 IPR006259 Adenylate kinase subfamily VF_0793 IPR007862 Adenylate kinase, active site lid domain VF_0793 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0794 IPR001015 Ferrochelatase VF_0794 IPR019772 Ferrochelatase, active site VF_0795 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VF_0795 IPR005215 Trigger factor VF_0795 IPR008880 Trigger factor, C-terminal domain VF_0795 IPR008881 Trigger factor, ribosome-binding, bacterial VF_0795 IPR027304 Trigger factor/SurA domain VF_0796 IPR001907 ATP-dependent Clp protease proteolytic subunit VF_0796 IPR018215 ClpP, active site VF_0796 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VF_0796 IPR029045 ClpP/crotonase-like domain VF_0796 IPR033135 VF_0796 VF_0797 IPR003593 AAA+ ATPase domain VF_0797 IPR003959 ATPase, AAA-type, core VF_0797 IPR004487 Clp protease, ATP-binding subunit ClpX VF_0797 IPR010603 Zinc finger, ClpX C4-type VF_0797 IPR019489 Clp ATPase, C-terminal VF_0797 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0798 IPR003111 Peptidase S16, lon N-terminal VF_0798 IPR003593 AAA+ ATPase domain VF_0798 IPR003959 ATPase, AAA-type, core VF_0798 IPR004815 Lon protease, bacterial/eukaryotic-type VF_0798 IPR008269 Peptidase S16, Lon C-terminal VF_0798 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_0798 IPR015947 PUA-like domain VF_0798 IPR020568 Ribosomal protein S5 domain 2-type fold VF_0798 IPR027065 Lon protease VF_0798 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0798 IPR027543 Lon protease, bacterial VF_0799 IPR000119 Histone-like bacterial DNA-binding protein VF_0799 IPR010992 Integration host factor (IHF)-like DNA-binding domain VF_0799 IPR020816 Histone-like DNA-binding protein, conserved site VF_0800 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type VF_0800 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site VF_0800 IPR027304 Trigger factor/SurA domain VF_0801 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VF_0801 IPR010994 RuvA domain 2-like VF_0802 IPR000109 Proton-dependent oligopeptide transporter family VF_0802 IPR005279 Amino acid/peptide transporter family VF_0802 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site VF_0802 IPR020846 Major facilitator superfamily domain VF_0803 IPR006645 NusG, N-terminal VF_0803 IPR010215 Transcription antitermination protein RfaH VF_0803 IPR014722 Ribosomal protein L2 domain 2 VF_0804 IPR001962 Asparagine synthase VF_0804 IPR006426 Asparagine synthase, glutamine-hydrolyzing VF_0804 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0804 IPR017932 Glutamine amidotransferase type 2 domain VF_0804 IPR029055 Nucleophile aminohydrolases, N-terminal VF_0805 IPR003148 Regulator of K+ conductance, N-terminal VF_0805 IPR006153 Cation/H+ exchanger VF_0805 IPR016040 NAD(P)-binding domain VF_0806 IPR000600 ROK VF_0806 IPR000835 MarR-type HTH domain VF_0806 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0807 IPR003764 N-acetylglucosamine-6-phosphate deacetylase VF_0807 IPR006680 Amidohydrolase 1 VF_0807 IPR011059 Metal-dependent hydrolase, composite domain VF_0807 IPR032466 VF_0807 VF_0808 IPR001996 Phosphotransferase system, IIB component, type 1 VF_0808 IPR003352 Phosphotransferase system, EIIC VF_0808 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component VF_0808 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VF_0809 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VF_0809 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VF_0809 IPR004514 Glutamine-tRNA synthetase VF_0809 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain VF_0809 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0809 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain VF_0809 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VF_0809 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain VF_0809 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain VF_0809 IPR022861 Glutamine-tRNA ligase, bacterial VF_0810 IPR002481 Ferric-uptake regulator VF_0810 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0811 IPR027961 Protein of unknown function DUF4442 VF_0811 IPR029069 HotDog domain VF_0812 IPR008254 Flavodoxin/nitric oxide synthase VF_0812 IPR010086 Flavodoxin, long chain VF_0812 IPR029039 Flavoprotein-like VF_0813 IPR021249 Protein of unknown function DUF2788 VF_0814 IPR000073 Alpha/beta hydrolase fold-1 VF_0814 IPR000639 Epoxide hydrolase-like VF_0814 IPR029058 Alpha/Beta hydrolase fold VF_0815 IPR005621 Regulation modulator SeqA VF_0815 IPR010985 Ribbon-helix-helix VF_0815 IPR013321 Arc-type ribbon-helix-helix VF_0815 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain VF_0816 IPR005843 Alpha-D-phosphohexomutase, C-terminal VF_0816 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VF_0816 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VF_0816 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VF_0816 IPR005852 Phosphoglucomutase, alpha-D-glucose specific VF_0816 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VF_0816 IPR016066 Alpha-D-phosphohexomutase, conserved site VF_0817 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VF_0818 IPR002020 Citrate synthase-like VF_0818 IPR010953 Citrate synthase, type I VF_0818 IPR016142 Citrate synthase-like, large alpha subdomain VF_0818 IPR016143 Citrate synthase-like, small alpha subdomain VF_0818 IPR019810 Citrate synthase active site VF_0818 IPR024176 Citrate synthase, bacterial-type VF_0819 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit VF_0819 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit VF_0819 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site VF_0820 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit VF_0820 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor VF_0821 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VF_0821 IPR003953 FAD binding domain VF_0821 IPR011281 Succinate dehydrogenase, flavoprotein subunit VF_0821 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VF_0821 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VF_0821 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_0821 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VF_0821 IPR030664 VF_0821 VF_0822 IPR001041 2Fe-2S ferredoxin-type domain VF_0822 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VF_0822 IPR009051 Alpha-helical ferredoxin VF_0822 IPR012675 Beta-grasp domain VF_0822 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_0822 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VF_0823 IPR001017 Dehydrogenase, E1 component VF_0823 IPR005475 Transketolase-like, pyrimidine-binding domain VF_0823 IPR011603 2-oxoglutarate dehydrogenase E1 component VF_0823 IPR029061 Thiamin diphosphate-binding fold VF_0823 IPR031717 VF_0823 VF_0823 IPR032106 VF_0823 VF_0824 IPR000089 Biotin/lipoyl attachment VF_0824 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VF_0824 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VF_0824 IPR004167 E3 binding VF_0824 IPR006255 Dihydrolipoamide succinyltransferase VF_0824 IPR011053 Single hybrid motif VF_0824 IPR023213 Chloramphenicol acetyltransferase-like domain VF_0825 IPR005809 Succinyl-CoA synthetase, beta subunit VF_0825 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VF_0825 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type VF_0825 IPR013815 ATP-grasp fold, subdomain 1 VF_0825 IPR013816 ATP-grasp fold, subdomain 2 VF_0825 IPR016102 Succinyl-CoA synthetase-like VF_0825 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site VF_0826 IPR003781 CoA-binding VF_0826 IPR005810 Succinyl-CoA ligase, alpha subunit VF_0826 IPR005811 ATP-citrate lyase/succinyl-CoA ligase VF_0826 IPR016040 NAD(P)-binding domain VF_0826 IPR016102 Succinyl-CoA synthetase-like VF_0826 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VF_0827 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_0827 IPR033480 VF_0827 VF_0828 IPR001626 ABC-3 VF_0828 IPR029022 ABC transporter, BtuC-like VF_0829 IPR003439 ABC transporter-like VF_0829 IPR003593 AAA+ ATPase domain VF_0829 IPR017871 ABC transporter, conserved site VF_0829 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0830 IPR006127 Periplasmic solute binding protein family VF_0830 IPR006128 Adhesion lipoprotein VF_0831 IPR007340 Opacity-associated protein A VF_0831 IPR011055 Duplicated hybrid motif VF_0831 IPR013731 Opacity-associated protein A, N-terminal VF_0831 IPR016047 Peptidase M23 VF_0832 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_0832 IPR009057 Homeodomain-like VF_0832 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase VF_0832 IPR011110 Two component regulator propeller VF_0832 IPR015943 WD40/YVTN repeat-like-containing domain VF_0832 IPR018060 DNA binding HTH domain, AraC-type VF_0832 IPR018062 HTH domain AraC-type, conserved site VF_0832 IPR020449 Transcription regulator HTH, AraC- type VF_0833 IPR007167 Ferrous iron transporter FeoA domain VF_0833 IPR008988 Transcriptional repressor, C-terminal VF_0834 IPR003373 Ferrous iron transport protein B VF_0834 IPR005225 Small GTP-binding protein domain VF_0834 IPR011619 Ferrous iron transport protein B, N-terminal VF_0834 IPR011640 Ferrous iron transport protein B, C-terminal VF_0834 IPR011642 Nucleoside recognition Gate VF_0834 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0835 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0835 IPR015102 Transcriptional regulator HTH-type, FeoC VF_0836 IPR002505 Phosphate acetyl/butaryl transferase VF_0836 IPR004614 Phosphate acetyltransferase VF_0836 IPR010766 DRTGG VF_0836 IPR016475 Phosphate acetyltransferase, bacteria VF_0836 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0836 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like VF_0837 IPR000890 Aliphatic acid kinase, short-chain VF_0837 IPR004372 Acetate/Proprionate kinase VF_0837 IPR023865 Aliphatic acid kinase, short-chain, conserved site VF_0838 IPR007334 Uncharacterised protein family UPF0208 VF_0839 IPR001278 Arginine-tRNA ligase VF_0839 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VF_0839 IPR005148 Arginyl tRNA synthetase N-terminal domain VF_0839 IPR008909 DALR anticodon binding VF_0839 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VF_0839 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_0840 IPR010393 Protein of unknown function DUF991 VF_0840 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VF_0841 IPR006905 Tryptophan halogenase VF_0841 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_0842 IPR001077 O-methyltransferase, family 2 VF_0842 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0842 IPR016461 Caffeate O-methyltransferase (COMT) family VF_0842 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0844 IPR014030 Beta-ketoacyl synthase, N-terminal VF_0844 IPR016039 Thiolase-like VF_0845 IPR002123 Phospholipid/glycerol acyltransferase VF_0846 IPR009081 Acyl carrier protein-like VF_0847 IPR003231 Acyl carrier protein (ACP) VF_0847 IPR009081 Acyl carrier protein-like VF_0849 IPR000873 AMP-dependent synthetase/ligase VF_0849 IPR025110 AMP-binding enzyme C-terminal domain VF_0850 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VF_0850 IPR016962 Dehydrase, ECs4332, predicted VF_0850 IPR029069 HotDog domain VF_0851 IPR001173 Glycosyltransferase 2-like VF_0851 IPR004960 Bacterial lipid A biosynthesis acyltransferase VF_0851 IPR029044 Nucleotide-diphospho-sugar transferases VF_0852 IPR001106 Aromatic amino acid lyase VF_0852 IPR008948 L-Aspartase-like VF_0852 IPR022313 Phenylalanine/histidine ammonia-lyases, active site VF_0852 IPR024083 Fumarase/histidase, N-terminal VF_0853 IPR029069 HotDog domain VF_0854 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VF_0854 IPR029046 Lipoprotein localisation LolA/LolB/LppX VF_0855 IPR004869 Membrane transport protein, MMPL domain VF_0856 IPR021675 Protein of unknown function DUF3261 VF_0857 IPR014030 Beta-ketoacyl synthase, N-terminal VF_0857 IPR014031 Beta-ketoacyl synthase, C-terminal VF_0857 IPR016039 Thiolase-like VF_0857 IPR018201 Beta-ketoacyl synthase, active site VF_0857 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VF_0858 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted VF_0858 IPR029069 HotDog domain VF_0859 IPR002347 Glucose/ribitol dehydrogenase VF_0859 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative VF_0859 IPR016040 NAD(P)-binding domain VF_0860 IPR014030 Beta-ketoacyl synthase, N-terminal VF_0860 IPR014031 Beta-ketoacyl synthase, C-terminal VF_0860 IPR016039 Thiolase-like VF_0860 IPR018201 Beta-ketoacyl synthase, active site VF_0860 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VF_0861 IPR005184 Domain of unknown function DUF306, Meta/HslJ VF_0862 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain VF_0862 IPR020055 Ribosomal protein L25, short-form VF_0862 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain VF_0862 IPR029751 Ribosomal protein L25 VF_0863 IPR002321 Cytochrome c, class II VF_0863 IPR010980 Cytochrome c/b562 VF_0864 IPR001650 Helicase, C-terminal VF_0864 IPR006935 Helicase/UvrB domain VF_0864 IPR011332 Zinc-binding ribosomal protein VF_0864 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_0864 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0865 IPR001736 Phospholipase D/Transphosphatidylase VF_0865 IPR025202 Phospholipase D-like domain VF_0868 IPR025588 YcxB-like protein VF_0869 IPR018654 Protein of unknown function DUF2084 VF_0870 IPR000182 GNAT domain VF_0870 IPR016181 Acyl-CoA N-acyltransferase VF_0871 IPR001647 DNA-binding HTH domain, TetR-type VF_0871 IPR009057 Homeodomain-like VF_0871 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_0872 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_0872 IPR004090 Chemotaxis methyl-accepting receptor VF_0872 IPR025991 Chemoreceptor zinc-binding domain VF_0874 IPR005665 Protein-export membrane protein SecF, bacterial VF_0874 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VF_0874 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VF_0874 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VF_0875 IPR005791 Protein translocase subunit SecD VF_0875 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VF_0875 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VF_0875 IPR027398 SecD export protein N-terminal TM domain VF_0877 IPR000847 Transcription regulator HTH, LysR VF_0877 IPR005119 LysR, substrate-binding VF_0877 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0878 IPR032317 VF_0878 VF_0879 IPR004638 Drug resistance transporter EmrB/QacA subfamily VF_0879 IPR011701 Major facilitator superfamily VF_0879 IPR020846 Major facilitator superfamily domain VF_0880 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VF_0880 IPR002942 RNA-binding S4 domain VF_0880 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VF_0880 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VF_0880 IPR020103 Pseudouridine synthase, catalytic domain VF_0881 IPR004812 Drug resistance transporter Bcr/CmlA subfamily VF_0881 IPR011701 Major facilitator superfamily VF_0881 IPR020846 Major facilitator superfamily domain VF_0882 IPR021316 Protein of unknown function DUF2913 VF_0883 IPR016040 NAD(P)-binding domain VF_0883 IPR021295 Protein of unknown function DUF2867 VF_0884 IPR003439 ABC transporter-like VF_0884 IPR003593 AAA+ ATPase domain VF_0884 IPR017871 ABC transporter, conserved site VF_0884 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0885 IPR003838 Permease FtsX-like VF_0886 IPR010791 Hydroxyneurosporene synthase VF_0886 IPR023374 AttH-like domain VF_0886 IPR033451 VF_0886 VF_0887 IPR004670 Na+/H+ antiporter NhaA VF_0887 IPR023171 Na/H antiporter domain VF_0888 IPR010758 Trans-2-enoyl-CoA reductase VF_0888 IPR024906 Enoyl reductase FAD binding domain VF_0888 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative VF_0889 IPR006037 Regulator of K+ conductance, C-terminal VF_0889 IPR006512 YidE/YbjL duplication VF_0890 IPR002109 Glutaredoxin VF_0890 IPR011902 Glutaredoxin, GrxA VF_0890 IPR012336 Thioredoxin-like fold VF_0890 IPR014025 Glutaredoxin subgroup VF_0891 IPR000281 Helix-turn-helix protein RpiR VF_0891 IPR001347 Sugar isomerase (SIS) VF_0891 IPR009057 Homeodomain-like VF_0891 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0892 IPR002129 Pyridoxal phosphate-dependent decarboxylase VF_0892 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_0892 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_0892 IPR015424 Pyridoxal phosphate-dependent transferase VF_0892 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent VF_0894 IPR005642 Protein of unknown function DUF340, prokaryotic membrane VF_0895 IPR013976 Metal-dependent hydrolase HDOD VF_0896 IPR007076 TfoX, N-terminal VF_0896 IPR007077 TfoX, C-terminal VF_0896 IPR026256 Transcriptional regulator, TfoX/Sxy-type VF_0898 IPR010352 Protein of unknown function DUF945 VF_0899 IPR000192 Aminotransferase class V domain VF_0899 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_0899 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_0899 IPR015424 Pyridoxal phosphate-dependent transferase VF_0899 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site VF_0899 IPR022278 Phosphoserine aminotransferase VF_0900 IPR003439 ABC transporter-like VF_0900 IPR003593 AAA+ ATPase domain VF_0900 IPR011527 ABC transporter type 1, transmembrane domain VF_0900 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC VF_0900 IPR017871 ABC transporter, conserved site VF_0900 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0901 IPR003439 ABC transporter-like VF_0901 IPR003593 AAA+ ATPase domain VF_0901 IPR011527 ABC transporter type 1, transmembrane domain VF_0901 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD VF_0901 IPR017871 ABC transporter, conserved site VF_0901 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0902 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II VF_0902 IPR005982 Thioredoxin reductase VF_0902 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site VF_0902 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_0903 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VF_0903 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VF_0903 IPR008141 Alanine dehydrogenase VF_0903 IPR016040 NAD(P)-binding domain VF_0903 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_0904 IPR000485 AsnC-type HTH domain VF_0904 IPR011008 Dimeric alpha-beta barrel VF_0904 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0904 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VF_0904 IPR019887 Transcription regulator AsnC-type, C-terminal VF_0904 IPR019888 Transcription regulator AsnC-type VF_0905 IPR002543 FtsK domain VF_0905 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0905 IPR018541 FtsK gamma domain VF_0905 IPR025199 Domain of unknown function DUF4117 VF_0905 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0906 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VF_0906 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria VF_0906 IPR029046 Lipoprotein localisation LolA/LolB/LppX VF_0907 IPR003593 AAA+ ATPase domain VF_0907 IPR003959 ATPase, AAA-type, core VF_0907 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VF_0907 IPR021886 MgsA AAA+ ATPase C-terminal VF_0907 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0907 IPR032423 VF_0907 VF_0908 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain VF_0908 IPR002317 Serine-tRNA ligase, type1 VF_0908 IPR010978 tRNA-binding arm VF_0908 IPR015866 Serine-tRNA synthetase, type1, N-terminal VF_0909 IPR005746 Thioredoxin VF_0909 IPR012336 Thioredoxin-like fold VF_0909 IPR013766 Thioredoxin domain VF_0910 IPR007376 dsDNA mimic, putative VF_0911 IPR011611 Carbohydrate kinase PfkB VF_0911 IPR029056 Ribokinase-like VF_0912 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase VF_0912 IPR011013 Galactose mutarotase-like domain VF_0912 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup VF_0912 IPR025532 Glucose-6-phosphate 1-epimerase VF_0913 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VF_0913 IPR016040 NAD(P)-binding domain VF_0913 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VF_0913 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VF_0913 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VF_0913 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VF_0914 IPR002579 Peptide methionine sulphoxide reductase MrsB VF_0914 IPR011057 Mss4-like VF_0914 IPR028427 Peptide methionine sulfoxide reductase VF_0915 IPR021372 Protein of unknown function DUF2989 VF_0916 IPR009749 Protein of unknown function DUF1315 VF_0917 IPR005821 Ion transport domain VF_0917 IPR028325 Voltage-gated potassium channel VF_0918 IPR001670 Alcohol dehydrogenase, iron-type VF_0918 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase VF_0918 IPR015590 Aldehyde dehydrogenase domain VF_0918 IPR016161 Aldehyde/histidinol dehydrogenase VF_0918 IPR016162 Aldehyde dehydrogenase, N-terminal VF_0918 IPR016163 Aldehyde dehydrogenase, C-terminal VF_0918 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VF_0919 IPR016040 NAD(P)-binding domain VF_0920 IPR021879 Ribosomal S4P (gammaproteobacterial) VF_0921 IPR001189 Manganese/iron superoxide dismutase VF_0921 IPR019831 Manganese/iron superoxide dismutase, N-terminal VF_0921 IPR019832 Manganese/iron superoxide dismutase, C-terminal VF_0921 IPR019833 Manganese/iron superoxide dismutase, binding site VF_0922 IPR002109 Glutaredoxin VF_0922 IPR004480 Monothiol glutaredoxin-related VF_0922 IPR012336 Thioredoxin-like fold VF_0922 IPR014434 Monothiol glutaredoxin VF_0923 IPR001789 Signal transduction response regulator, receiver domain VF_0923 IPR011006 CheY-like superfamily VF_0923 IPR011990 Tetratricopeptide-like helical domain VF_0924 IPR001991 Sodium:dicarboxylate symporter VF_0924 IPR018461 Na+/H+ antiporter, NhaC-like VF_0924 IPR032813 VF_0924 VF_0925 IPR005987 Ribonuclease T VF_0925 IPR012337 Ribonuclease H-like domain VF_0925 IPR013520 Exonuclease, RNase T/DNA polymerase III VF_0926 IPR006664 Outer membrane protein, bacterial VF_0926 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VF_0927 IPR020206 Uncharacterised protein family, VP2110 VF_0928 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VF_0928 IPR004361 Glyoxalase I VF_0928 IPR018146 Glyoxalase I, conserved site VF_0928 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VF_0929 IPR000445 Helix-hairpin-helix motif VF_0929 IPR003265 HhH-GPD domain VF_0929 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif VF_0929 IPR004035 Endonuclease III, iron-sulphur binding site VF_0929 IPR004036 Endonuclease III-like, conserved site-2 VF_0929 IPR005759 Endonuclease III VF_0929 IPR011257 DNA glycosylase VF_0929 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal VF_0930 IPR003667 Electron transport complex, Rnf/Nqr VF_0930 IPR010968 Electron transport complex, RnfE VF_0931 IPR007329 FMN-binding VF_0931 IPR010209 Electron transport complex, RnfG VF_0932 IPR004338 NADH-quinone reductase NQR2/RnfD VF_0932 IPR011303 Electron transport complex, RnfD VF_0933 IPR009051 Alpha-helical ferredoxin VF_0933 IPR010208 Electron transport complex protein RnfC VF_0933 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit VF_0933 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VF_0933 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_0933 IPR019554 Soluble ligand binding domain VF_0933 IPR026902 RnfC Barrel sandwich hybrid domain VF_0934 IPR007202 4Fe-4S domain VF_0934 IPR010207 Electron transport complex, RnfB VF_0934 IPR016463 Electron transport complex, RnfB, Proteobacteria VF_0934 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_0935 IPR003667 Electron transport complex, Rnf/Nqr VF_0935 IPR011293 Electron transport complex, RnfA VF_0936 IPR001650 Helicase, C-terminal VF_0936 IPR001943 UVR domain VF_0936 IPR004807 UvrABC system, subunit B VF_0936 IPR006935 Helicase/UvrB domain VF_0936 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_0936 IPR024759 UvrB, YAD/RRR-motif-containing domain VF_0936 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0937 IPR001789 Signal transduction response regulator, receiver domain VF_0937 IPR002078 RNA polymerase sigma factor 54 interaction domain VF_0937 IPR002197 DNA binding HTH domain, Fis-type VF_0937 IPR003593 AAA+ ATPase domain VF_0937 IPR009057 Homeodomain-like VF_0937 IPR011006 CheY-like superfamily VF_0937 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VF_0937 IPR025944 Sigma-54 interaction domain, conserved site VF_0937 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0938 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VF_0939 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VF_0939 IPR010119 Gluconeogenesis factor VF_0940 IPR006638 Elongator protein 3/MiaB/NifB VF_0940 IPR007197 Radical SAM VF_0940 IPR010505 Molybdenum cofactor synthesis C-terminal VF_0940 IPR013483 Molybdenum cofactor biosynthesis protein A VF_0940 IPR013785 Aldolase-type TIM barrel VF_0941 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain VF_0941 IPR023045 Molybdenum cofactor biosynthesis C VF_0941 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type VF_0942 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VF_0942 IPR010034 Molybdopterin converting factor, subunit 1 VF_0942 IPR012675 Beta-grasp domain VF_0942 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VF_0943 IPR003448 Molybdopterin biosynthesis MoaE VF_0944 IPR011758 Alpha-L-glutamate ligase-related protein VF_0944 IPR013816 ATP-grasp fold, subdomain 2 VF_0945 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VF_0945 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VF_0946 IPR021109 Aspartic peptidase domain VF_0947 IPR010017 tRNA (mo5U34)-methyltransferase VF_0947 IPR027555 tRNA (mo5U34)-methyltransferase-like VF_0947 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0948 IPR005271 tRNA (cmo5U34)-methyltransferase VF_0948 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_0949 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VF_0949 IPR004115 GAD-like domain VF_0949 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VF_0949 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VF_0949 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type VF_0949 IPR012340 Nucleic acid-binding, OB-fold VF_0949 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like VF_0949 IPR029351 GAD domain VF_0950 IPR002176 Crossover junction endodeoxyribonuclease RuvC VF_0950 IPR012337 Ribonuclease H-like domain VF_0950 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site VF_0951 IPR000085 Bacterial DNA recombination protein RuvA VF_0951 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VF_0951 IPR010994 RuvA domain 2-like VF_0951 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal VF_0951 IPR012340 Nucleic acid-binding, OB-fold VF_0951 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial VF_0952 IPR003593 AAA+ ATPase domain VF_0952 IPR004605 DNA helicase, Holliday junction RuvB type VF_0952 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal VF_0952 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal VF_0952 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0952 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0953 IPR002585 Cytochrome d ubiquinol oxidase, subunit I VF_0954 IPR003317 Cytochrome d ubiquinol oxidase, subunit II VF_0955 IPR011724 Cyd operon protein YbgT VF_0955 IPR012994 Membrane bound YbgT-like VF_0956 IPR011846 Cyd operon protein YbgE VF_0957 IPR006683 Thioesterase superfamily VF_0957 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family VF_0957 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase VF_0957 IPR029069 HotDog domain VF_0958 IPR002898 MotA/TolQ/ExbB proton channel VF_0958 IPR014163 Tol-Pal system, TolQ VF_0959 IPR003400 Biopolymer transport protein ExbD/TolR VF_0959 IPR014168 Biopolymer transport, TolR VF_0960 IPR014161 Tol-Pal system, TolA VF_0962 IPR007195 TolB, N-terminal VF_0962 IPR011659 WD40-like Beta Propeller VF_0962 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB VF_0962 IPR015943 WD40/YVTN repeat-like-containing domain VF_0963 IPR006664 Outer membrane protein, bacterial VF_0963 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal VF_0963 IPR006690 Outer membrane protein, OmpA-like, conserved site VF_0963 IPR014169 Peptidoglycan-associated lipoprotein VF_0964 IPR011990 Tetratricopeptide-like helical domain VF_0964 IPR014162 Tol-Pal system, YbgF VF_0964 IPR019734 Tetratricopeptide repeat VF_0964 IPR032519 VF_0964 VF_0965 IPR003473 Quinolinate synthetase A VF_0965 IPR023513 Quinolinate synthase A, type 1 VF_0966 IPR011978 Uncharacterised protein family UPF0149 VF_0967 IPR010574 L-alanine exporter AlaE VF_0968 IPR001466 Beta-lactamase-related VF_0968 IPR012338 Beta-lactamase/transpeptidase-like VF_0969 IPR007263 Protein of unknown function DUF393 VF_0970 IPR002347 Glucose/ribitol dehydrogenase VF_0970 IPR016040 NAD(P)-binding domain VF_0971 IPR006073 GTP binding domain VF_0971 IPR016496 GTPase HflX VF_0971 IPR025121 GTPase HflX N-terminal domain VF_0971 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0971 IPR032305 VF_0971 VF_0972 IPR007627 RNA polymerase sigma-70 region 2 VF_0972 IPR011991 Winged helix-turn-helix DNA-binding domain VF_0972 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 VF_0972 IPR013324 RNA polymerase sigma factor, region 3/4 VF_0972 IPR013325 RNA polymerase sigma factor, region 2 VF_0972 IPR014284 RNA polymerase sigma-70 like domain VF_0972 IPR014304 RNA polymerase sigma-Z type VF_0973 IPR006334 Glutamate--cysteine ligase, monofunctional VF_0973 IPR007370 Glutamate--cysteine ligase VF_0974 IPR003439 ABC transporter-like VF_0974 IPR003593 AAA+ ATPase domain VF_0974 IPR011527 ABC transporter type 1, transmembrane domain VF_0974 IPR017871 ABC transporter, conserved site VF_0974 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0975 IPR003439 ABC transporter-like VF_0975 IPR003593 AAA+ ATPase domain VF_0975 IPR011527 ABC transporter type 1, transmembrane domain VF_0975 IPR017871 ABC transporter, conserved site VF_0975 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0976 IPR004887 Glutathione synthase, substrate-binding, eukaryotic VF_0976 IPR005615 Glutathione synthase, eukaryotic VF_0976 IPR014042 Glutathione synthase, alpha-helical, eukaryotic VF_0976 IPR014049 Glutathione synthase, N-terminal, eukaryotic VF_0976 IPR014709 Glutathione synthase domain VF_0976 IPR016185 Pre-ATP-grasp domain VF_0977 IPR000182 GNAT domain VF_0977 IPR016181 Acyl-CoA N-acyltransferase VF_0978 IPR002085 Alcohol dehydrogenase superfamily, zinc-type VF_0978 IPR011032 GroES (chaperonin 10)-like VF_0978 IPR013154 Alcohol dehydrogenase GroES-like VF_0978 IPR016040 NAD(P)-binding domain VF_0978 IPR020843 Polyketide synthase, enoylreductase VF_0980 IPR011701 Major facilitator superfamily VF_0980 IPR020846 Major facilitator superfamily domain VF_0982 IPR000620 Drug/metabolite transporter VF_0982 IPR004779 Carboxylate/Amino Acid/Amine Transporter VF_0983 IPR005590 Protein of unknown function DUF333 VF_0984 IPR000010 Proteinase inhibitor I25, cystatin VF_0985 IPR000160 GGDEF domain VF_0985 IPR001633 EAL domain VF_0985 IPR004010 Cache domain VF_0985 IPR029787 Nucleotide cyclase VF_0985 IPR033480 VF_0985 VF_0986 IPR001223 Glycoside hydrolase, family 18, catalytic domain VF_0986 IPR001579 Glycoside hydrolase, chitinase active site VF_0986 IPR003610 Carbohydrate-binding module family 5/12 VF_0986 IPR009470 Chitinase, C-terminal VF_0986 IPR011583 Chitinase II VF_0986 IPR013781 Glycoside hydrolase, catalytic domain VF_0986 IPR017853 Glycoside hydrolase, superfamily VF_0986 IPR029070 Chitinase insertion domain VF_0986 IPR032798 VF_0986 VF_0987 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_0987 IPR004090 Chemotaxis methyl-accepting receptor VF_0988 IPR007433 Protein of unknown function DUF481 VF_0989 IPR000014 PAS domain VF_0989 IPR000160 GGDEF domain VF_0989 IPR001610 PAC motif VF_0989 IPR029151 Periplasmic sensor domain-like VF_0989 IPR029787 Nucleotide cyclase VF_0989 IPR033479 VF_0989 VF_0990 IPR000719 Protein kinase domain VF_0990 IPR008271 Serine/threonine-protein kinase, active site VF_0990 IPR011009 Protein kinase-like domain VF_0990 IPR017441 Protein kinase, ATP binding site VF_0991 IPR001932 Protein phosphatase 2C (PP2C)-like domain VF_0991 IPR015655 Protein phosphatase 2C VF_0993 IPR009612 ImcF-related VF_0993 IPR010623 Domain of unknown function DUF1215 VF_0993 IPR017731 Type VI secretion system, IcmF VF_0993 IPR025743 ImcF-related, N-terminal domain VF_0993 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0994 IPR017732 Type IV / VI secretion system, DotU VF_0995 IPR010263 Protein of unknown function DUF876 VF_0996 IPR017734 Type VI secretion system, lipoprotein SciN VF_0997 IPR000253 Forkhead-associated (FHA) domain VF_0997 IPR008984 SMAD/FHA domain VF_0997 IPR017735 Type VI secretion system, FHA domain-containing protein VF_0998 IPR002078 RNA polymerase sigma factor 54 interaction domain VF_0998 IPR002197 DNA binding HTH domain, Fis-type VF_0998 IPR003593 AAA+ ATPase domain VF_0998 IPR009057 Homeodomain-like VF_0998 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VF_0998 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VF_0998 IPR025944 Sigma-54 interaction domain, conserved site VF_0998 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0999 IPR001270 ClpA/B family VF_0999 IPR003593 AAA+ ATPase domain VF_0999 IPR003959 ATPase, AAA-type, core VF_0999 IPR004176 Clp, N-terminal VF_0999 IPR017729 Type VI secretion system, ATPase ClpV1 VF_0999 IPR018368 ClpA/B, conserved site 1 VF_0999 IPR019489 Clp ATPase, C-terminal VF_0999 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_0999 IPR028299 ClpA/B, conserved site 2 VF_1000 IPR010732 Protein of unknown function DUF1305 VF_1001 IPR010272 Type VI secretion system, VCA0110 VF_1002 IPR007048 GpW/Gp25/anti-adapter protein IraD VF_1002 IPR017737 Type VI secretion system, lysozyme-related protein VF_1003 IPR010269 Protein of unknown function DUF877 VF_1004 IPR008312 Uncharacterised conserved protein UCP028301 VF_1005 IPR010657 ImpA, N-terminal VF_1005 IPR017739 Type VI secretion system-associated, VCA0119 VF_1006 IPR019630 Protein of unknown function DUF2496, YbaM-related VF_1007 IPR010890 Primosomal replication PriB/PriC VF_1008 IPR002781 Transmembrane protein TauE like VF_1009 IPR006555 ATP-dependent helicase, C-terminal VF_1009 IPR010614 DEAD2 VF_1009 IPR011545 DEAD/DEAH box helicase domain VF_1009 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_1009 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1012 IPR001348 ATP phosphoribosyltransferase HisG VF_1012 IPR011322 Nitrogen regulatory PII-like, alpha/beta VF_1012 IPR013115 Histidine biosynthesis HisG, C-terminal VF_1012 IPR013820 ATP phosphoribosyltransferase, catalytic domain VF_1012 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VF_1012 IPR018198 ATP phosphoribosyltransferase, conserved site VF_1012 IPR020621 ATP phosphoribosyltransferase HisG, long form VF_1013 IPR001692 Histidinol dehydrogenase, conserved site VF_1013 IPR012131 Histidinol dehydrogenase VF_1013 IPR016161 Aldehyde/histidinol dehydrogenase VF_1013 IPR022695 Histidinol dehydrogenase, monofunctional VF_1014 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site VF_1014 IPR004839 Aminotransferase, class I/classII VF_1014 IPR005861 Histidinol-phosphate aminotransferase family VF_1014 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_1014 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_1014 IPR015424 Pyridoxal phosphate-dependent transferase VF_1015 IPR000807 Imidazoleglycerol-phosphate dehydratase VF_1015 IPR005954 Histidinol-phosphatase VF_1015 IPR006543 Histidinol-phosphate phosphatase VF_1015 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VF_1015 IPR013954 Polynucleotide kinase 3 phosphatase VF_1015 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site VF_1015 IPR020566 Histidine biosynthesis bifunctional protein HisB VF_1015 IPR020568 Ribosomal protein S5 domain 2-type fold VF_1015 IPR023214 HAD-like domain VF_1016 IPR010139 Imidazole glycerol phosphate synthase, subunit H VF_1016 IPR017926 Glutamine amidotransferase VF_1016 IPR029062 Class I glutamine amidotransferase-like VF_1017 IPR006062 Histidine biosynthesis VF_1017 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA VF_1017 IPR011060 Ribulose-phosphate binding barrel VF_1017 IPR013785 Aldolase-type TIM barrel VF_1017 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase VF_1018 IPR004651 Histidine biosynthesis, HisF VF_1018 IPR006062 Histidine biosynthesis VF_1018 IPR011060 Ribulose-phosphate binding barrel VF_1018 IPR013785 Aldolase-type TIM barrel VF_1019 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain VF_1019 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase VF_1019 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like VF_1019 IPR023019 Histidine biosynthesis bifunctional protein HisIE VF_1020 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VF_1020 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VF_1020 IPR006508 Pseudouridine synthase, RluA-like VF_1020 IPR020103 Pseudouridine synthase, catalytic domain VF_1021 IPR019614 S-adenosylmethionine-dependent methyltransferase VF_1021 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1022 IPR016502 Uncharacterised conserved protein UCP007010 VF_1023 IPR005545 YCII-related VF_1023 IPR011008 Dimeric alpha-beta barrel VF_1024 IPR006683 Thioesterase superfamily VF_1024 IPR029069 HotDog domain VF_1025 IPR006008 Intracellular septation protein A VF_1026 IPR001991 Sodium:dicarboxylate symporter VF_1027 IPR002028 Tryptophan synthase, alpha chain VF_1027 IPR011060 Ribulose-phosphate binding barrel VF_1027 IPR013785 Aldolase-type TIM barrel VF_1027 IPR018204 Tryptophan synthase, alpha chain, active site VF_1028 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VF_1028 IPR006653 Tryptophan synthase, beta chain, conserved site VF_1028 IPR006654 Tryptophan synthase, beta chain VF_1028 IPR023026 Tryptophan synthase beta chain/beta chain-like VF_1029 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain VF_1029 IPR001468 Indole-3-glycerol phosphate synthase, conserved site VF_1029 IPR011060 Ribulose-phosphate binding barrel VF_1029 IPR013785 Aldolase-type TIM barrel VF_1029 IPR013798 Indole-3-glycerol phosphate synthase VF_1031 IPR000312 Glycosyl transferase, family 3 VF_1031 IPR005940 Anthranilate phosphoribosyl transferase VF_1031 IPR017459 Glycosyl transferase family 3, N-terminal domain VF_1032 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VF_1032 IPR017926 Glutamine amidotransferase VF_1032 IPR029062 Class I glutamine amidotransferase-like VF_1033 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial VF_1033 IPR005801 ADC synthase VF_1033 IPR015890 Chorismate binding, C-terminal VF_1033 IPR019999 Anthranilate synthase component I - like VF_1034 IPR003141 Polymerase/histidinol phosphatase, N-terminal VF_1034 IPR004013 PHP, C-terminal VF_1034 IPR016195 Polymerase/histidinol phosphatase-like VF_1035 IPR006070 YrdC-like domain VF_1035 IPR017945 DHBP synthase RibB-like alpha/beta domain VF_1036 IPR001789 Signal transduction response regulator, receiver domain VF_1036 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1036 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_1036 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_1036 IPR011006 CheY-like superfamily VF_1037 IPR020384 Homoserine lactone synthase, LuxM/VanM, C-terminal VF_1038 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VF_1038 IPR002942 RNA-binding S4 domain VF_1038 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VF_1038 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VF_1038 IPR020103 Pseudouridine synthase, catalytic domain VF_1039 IPR002347 Glucose/ribitol dehydrogenase VF_1039 IPR016040 NAD(P)-binding domain VF_1039 IPR020904 Short-chain dehydrogenase/reductase, conserved site VF_1040 IPR002142 Peptidase S49 VF_1040 IPR013703 Peptidase S49, N-terminal proteobacteria VF_1040 IPR029045 ClpP/crotonase-like domain VF_1044 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA VF_1044 IPR000477 Reverse transcriptase domain VF_1046 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1049 IPR001091 Restriction/modification DNA-methylase VF_1049 IPR002941 DNA methylase N-4/N-6 VF_1049 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1050 IPR019633 Protein of unknown function DUF2498 VF_1051 IPR000380 DNA topoisomerase, type IA VF_1051 IPR003601 DNA topoisomerase, type IA, domain 2 VF_1051 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VF_1051 IPR005733 DNA topoisomerase I, bacterial-type VF_1051 IPR006171 Toprim domain VF_1051 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type VF_1051 IPR013497 DNA topoisomerase, type IA, central VF_1051 IPR013498 DNA topoisomerase, type IA, zn finger VF_1051 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VF_1051 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VF_1051 IPR023405 DNA topoisomerase, type IA, core domain VF_1051 IPR023406 DNA topoisomerase, type IA, active site VF_1051 IPR028612 DNA topoisomerase I, type IA VF_1052 IPR001898 Sodium/sulphate symporter VF_1052 IPR030676 VF_1052 VF_1053 IPR000595 Cyclic nucleotide-binding domain VF_1053 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1053 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_1053 IPR014710 RmlC-like jelly roll fold VF_1053 IPR018490 Cyclic nucleotide-binding-like VF_1054 IPR001789 Signal transduction response regulator, receiver domain VF_1054 IPR011006 CheY-like superfamily VF_1055 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VF_1055 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VF_1055 IPR016040 NAD(P)-binding domain VF_1055 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VF_1055 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VF_1056 IPR005841 Alpha-D-phosphohexomutase superfamily VF_1056 IPR005843 Alpha-D-phosphohexomutase, C-terminal VF_1056 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VF_1056 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VF_1056 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VF_1056 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VF_1056 IPR016066 Alpha-D-phosphohexomutase, conserved site VF_1057 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VF_1058 IPR011234 Fumarylacetoacetase, C-terminal-related VF_1059 IPR000726 Glycoside hydrolase, family 19, catalytic VF_1059 IPR003610 Carbohydrate-binding module family 5/12 VF_1059 IPR023346 Lysozyme-like domain VF_1060 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VF_1060 IPR002933 Peptidase M20 VF_1060 IPR010161 Peptidase M20B, tripeptide aminopeptidase VF_1060 IPR011650 Peptidase M20, dimerisation domain VF_1061 IPR004669 C4-dicarboxylate anaerobic carrier VF_1061 IPR018385 C4-dicarboxylate anaerobic carrier-like VF_1062 IPR001114 Adenylosuccinate synthetase VF_1062 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1063 IPR000847 Transcription regulator HTH, LysR VF_1063 IPR005119 LysR, substrate-binding VF_1063 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1064 IPR002129 Pyridoxal phosphate-dependent decarboxylase VF_1064 IPR010107 Glutamate decarboxylase VF_1064 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_1064 IPR015424 Pyridoxal phosphate-dependent transferase VF_1065 IPR006037 Regulator of K+ conductance, C-terminal VF_1065 IPR006512 YidE/YbjL duplication VF_1066 IPR000847 Transcription regulator HTH, LysR VF_1066 IPR005119 LysR, substrate-binding VF_1066 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1067 IPR032808 VF_1067 VF_1068 IPR003829 Pirin, N-terminal domain VF_1068 IPR008778 Pirin, C-terminal domain VF_1068 IPR011051 RmlC-like cupin domain VF_1068 IPR012093 Pirin VF_1068 IPR014710 RmlC-like jelly roll fold VF_1070 IPR010621 Domain of unknown function DUF1214 VF_1070 IPR010679 Domain of unknown function DUF1254 VF_1070 IPR023289 VPA0735-like domain VF_1071 IPR010621 Domain of unknown function DUF1214 VF_1071 IPR010679 Domain of unknown function DUF1254 VF_1071 IPR023289 VPA0735-like domain VF_1072 IPR000847 Transcription regulator HTH, LysR VF_1072 IPR005119 LysR, substrate-binding VF_1072 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1073 IPR003192 Porin, LamB type VF_1073 IPR016896 Protein of unknown function DUF2860 VF_1074 IPR003313 AraC-type arabinose-binding/dimerisation domain VF_1074 IPR009057 Homeodomain-like VF_1074 IPR018060 DNA binding HTH domain, AraC-type VF_1074 IPR018062 HTH domain AraC-type, conserved site VF_1074 IPR020449 Transcription regulator HTH, AraC- type VF_1075 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VF_1076 IPR000572 Oxidoreductase, molybdopterin-binding domain VF_1077 IPR005532 Formylglycine-generating sulphatase enzyme domain VF_1077 IPR016187 C-type lectin fold VF_1078 IPR017021 Uncharacterised conserved protein UCP033763 VF_1078 IPR018988 Protein of unknown function DUF2000 VF_1078 IPR023476 Peptidyl-tRNA hydrolase II domain VF_1080 IPR021125 Protein of unknown function DUF2127 VF_1081 IPR001647 DNA-binding HTH domain, TetR-type VF_1081 IPR009057 Homeodomain-like VF_1081 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VF_1081 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_1082 IPR004045 Glutathione S-transferase, N-terminal VF_1082 IPR010987 Glutathione S-transferase, C-terminal-like VF_1082 IPR012336 Thioredoxin-like fold VF_1083 IPR004045 Glutathione S-transferase, N-terminal VF_1083 IPR004046 Glutathione S-transferase, C-terminal VF_1083 IPR010987 Glutathione S-transferase, C-terminal-like VF_1083 IPR012336 Thioredoxin-like fold VF_1084 IPR004685 Branched-chain amino acid transport system II carrier protein VF_1085 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VF_1085 IPR027385 Outer membrane protein beta-barrel VF_1086 IPR001867 Signal transduction response regulator, C-terminal VF_1086 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1086 IPR016032 Signal transduction response regulator, C-terminal effector VF_1088 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VF_1089 IPR011852 TRAP transporter solute receptor, TAXI family VF_1090 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VF_1090 IPR011853 TRAP transporter, 4TM/12TM fusion protein VF_1091 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1092 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1092 IPR013587 Nitrate/nitrite sensing protein VF_1093 IPR001320 Ionotropic glutamate receptor VF_1093 IPR001638 Extracellular solute-binding protein, family 3 VF_1094 IPR013216 Methyltransferase type 11 VF_1094 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1095 IPR000847 Transcription regulator HTH, LysR VF_1095 IPR005119 LysR, substrate-binding VF_1095 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1096 IPR002668 Concentrative nucleoside transporter N-terminal domain VF_1096 IPR008276 Concentrative nucleoside transporter VF_1096 IPR011642 Nucleoside recognition Gate VF_1096 IPR011657 Concentrative nucleoside transporter C-terminal domain VF_1096 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VF_1097 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VF_1098 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VF_1098 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VF_1098 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase VF_1098 IPR029000 Cyclophilin-like domain VF_1099 IPR000871 Beta-lactamase, class-A/D VF_1099 IPR012338 Beta-lactamase/transpeptidase-like VF_1099 IPR023650 Beta-lactamase, class-A active site VF_1100 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VF_1100 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VF_1101 IPR002711 HNH endonuclease VF_1101 IPR003615 HNH nuclease VF_1103 IPR007318 Phospholipid methyltransferase VF_1104 IPR033399 VF_1104 VF_1105 IPR003838 Permease FtsX-like VF_1105 IPR025857 MacB-like periplasmic core domain VF_1106 IPR003838 Permease FtsX-like VF_1106 IPR025857 MacB-like periplasmic core domain VF_1107 IPR003439 ABC transporter-like VF_1107 IPR003593 AAA+ ATPase domain VF_1107 IPR017871 ABC transporter, conserved site VF_1107 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1108 IPR001623 DnaJ domain VF_1108 IPR002939 Chaperone DnaJ, C-terminal VF_1108 IPR008971 HSP40/DnaJ peptide-binding VF_1108 IPR018253 DnaJ domain, conserved site VF_1110 IPR021529 Protein of unknown function DUF2798 VF_1111 IPR005119 LysR, substrate-binding VF_1111 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1112 IPR023214 HAD-like domain VF_1113 IPR000281 Helix-turn-helix protein RpiR VF_1113 IPR001347 Sugar isomerase (SIS) VF_1113 IPR009057 Homeodomain-like VF_1113 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1114 IPR001347 Sugar isomerase (SIS) VF_1114 IPR005486 Glucokinase regulatory protein, conserved site VF_1114 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ VF_1115 IPR001996 Phosphotransferase system, IIB component, type 1 VF_1115 IPR003352 Phosphotransferase system, EIIC VF_1115 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VF_1116 IPR001867 Signal transduction response regulator, C-terminal VF_1116 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1116 IPR016032 Signal transduction response regulator, C-terminal effector VF_1117 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1117 IPR033479 VF_1117 VF_1118 IPR009822 YaeQ VF_1118 IPR011335 Restriction endonuclease type II-like VF_1119 IPR002781 Transmembrane protein TauE like VF_1120 IPR016181 Acyl-CoA N-acyltransferase VF_1121 IPR000060 BCCT transporter family VF_1121 IPR018093 BCCT transporter, conserved site VF_1122 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain VF_1122 IPR002470 Peptidase S9A, prolyl oligopeptidase VF_1122 IPR002471 Peptidase S9, serine active site VF_1122 IPR023302 Peptidase S9A, N-terminal domain VF_1122 IPR029058 Alpha/Beta hydrolase fold VF_1124 IPR000109 Proton-dependent oligopeptide transporter family VF_1124 IPR005279 Amino acid/peptide transporter family VF_1124 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site VF_1124 IPR020846 Major facilitator superfamily domain VF_1124 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B VF_1126 IPR011989 Armadillo-like helical VF_1126 IPR016024 Armadillo-type fold VF_1128 IPR003959 ATPase, AAA-type, core VF_1128 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1129 IPR004119 Protein of unknown function DUF227 VF_1129 IPR011009 Protein kinase-like domain VF_1129 IPR015897 CHK kinase-like VF_1130 IPR001537 tRNA/rRNA methyltransferase, SpoU type VF_1130 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VF_1130 IPR029028 Alpha/beta knot methyltransferases VF_1131 IPR021139 NYN domain, limkain-b1-type VF_1131 IPR029060 PIN domain-like VF_1132 IPR006046 Alpha amylase VF_1132 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VF_1132 IPR013781 Glycoside hydrolase, catalytic domain VF_1132 IPR015902 Glycoside hydrolase, family 13 VF_1132 IPR017853 Glycoside hydrolase, superfamily VF_1133 IPR003660 HAMP linker domain VF_1133 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1134 IPR001310 Histidine triad (HIT) protein VF_1134 IPR011146 HIT-like domain VF_1134 IPR019808 Histidine triad, conserved site VF_1135 IPR011990 Tetratricopeptide-like helical domain VF_1136 IPR010824 Protein of unknown function DUF1425 VF_1137 IPR014094 Penicillin-binding protein activator LpoB VF_1138 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1138 IPR033479 VF_1138 VF_1139 IPR007416 Protein of unknown function DUF469 VF_1140 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1141 IPR002575 Aminoglycoside phosphotransferase VF_1141 IPR011009 Protein kinase-like domain VF_1141 IPR014093 Thiamine kinase VF_1142 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VF_1142 IPR022987 Uncharacterised protein family UPF0227 VF_1142 IPR029058 Alpha/Beta hydrolase fold VF_1143 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_1144 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VF_1144 IPR001650 Helicase, C-terminal VF_1144 IPR011545 DEAD/DEAH box helicase domain VF_1144 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_1144 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1146 IPR003610 Carbohydrate-binding module family 5/12 VF_1146 IPR032798 VF_1146 VF_1147 IPR003706 Carbon starvation protein CstA VF_1147 IPR025299 CstA C-terminal domain VF_1148 IPR001789 Signal transduction response regulator, receiver domain VF_1148 IPR007492 LytTR DNA-binding domain VF_1148 IPR011006 CheY-like superfamily VF_1149 IPR003018 GAF domain VF_1149 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1149 IPR010559 Signal transduction histidine kinase, internal region VF_1149 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region VF_1149 IPR029016 GAF domain-like VF_1150 IPR000791 GPR1/FUN34/yaaH VF_1152 IPR001915 Peptidase M48 VF_1152 IPR022919 Peptidase M48, protease HtpX, putative VF_1153 IPR009921 Domain of unknown function DUF1456 VF_1155 IPR001991 Sodium:dicarboxylate symporter VF_1156 IPR006680 Amidohydrolase 1 VF_1156 IPR011059 Metal-dependent hydrolase, composite domain VF_1156 IPR032466 VF_1156 VF_1157 IPR002477 Peptidoglycan binding-like VF_1157 IPR005490 L,D-transpeptidase catalytic domain VF_1158 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VF_1158 IPR010275 Protein of unknown function DUF882 VF_1159 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb VF_1159 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VF_1159 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VF_1159 IPR004522 Asparagine-tRNA ligase VF_1159 IPR012340 Nucleic acid-binding, OB-fold VF_1159 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like VF_1160 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein VF_1161 IPR006143 RND efflux pump, membrane fusion protein VF_1161 IPR032317 VF_1161 VF_1162 IPR003423 Outer membrane efflux protein VF_1163 IPR003838 Permease FtsX-like VF_1163 IPR025857 MacB-like periplasmic core domain VF_1164 IPR003838 Permease FtsX-like VF_1164 IPR025857 MacB-like periplasmic core domain VF_1165 IPR003439 ABC transporter-like VF_1165 IPR003593 AAA+ ATPase domain VF_1165 IPR017871 ABC transporter, conserved site VF_1165 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1166 IPR005135 Endonuclease/exonuclease/phosphatase VF_1167 IPR004593 Nuclease SbcCD subunit D VF_1167 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VF_1167 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VF_1167 IPR029052 Metallo-dependent phosphatase-like VF_1168 IPR027050 Nuclease SbcCD subunit C VF_1168 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1169 IPR006683 Thioesterase superfamily VF_1169 IPR029069 HotDog domain VF_1170 IPR017021 Uncharacterised conserved protein UCP033763 VF_1170 IPR018988 Protein of unknown function DUF2000 VF_1170 IPR023476 Peptidyl-tRNA hydrolase II domain VF_1171 IPR002091 Aromatic amino acid permease VF_1171 IPR018227 Tryptophan/tyrosine permease VF_1172 IPR002091 Aromatic amino acid permease VF_1172 IPR018227 Tryptophan/tyrosine permease VF_1173 IPR021242 Protein of unknown function DUF2799 VF_1174 IPR021242 Protein of unknown function DUF2799 VF_1176 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form VF_1176 IPR005130 Serine dehydratase-like, alpha subunit VF_1176 IPR005131 Serine dehydratase beta chain VF_1176 IPR029009 Allosteric substrate binding domain VF_1177 IPR018227 Tryptophan/tyrosine permease VF_1178 IPR000086 NUDIX hydrolase domain VF_1178 IPR015797 NUDIX hydrolase domain-like VF_1179 IPR005801 ADC synthase VF_1179 IPR005802 Para-aminobenzoate synthase, component I VF_1179 IPR006805 Anthranilate synthase component I, N-terminal VF_1179 IPR015890 Chorismate binding, C-terminal VF_1179 IPR019999 Anthranilate synthase component I - like VF_1180 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain VF_1180 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain VF_1180 IPR011167 Iron-dependent fumarate hydratase VF_1181 IPR021242 Protein of unknown function DUF2799 VF_1182 IPR006143 RND efflux pump, membrane fusion protein VF_1182 IPR032317 VF_1182 VF_1183 IPR006143 RND efflux pump, membrane fusion protein VF_1183 IPR032317 VF_1183 VF_1184 IPR001036 Acriflavin resistance protein VF_1184 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VF_1185 IPR021284 Protein of unknown function DUF2750 VF_1186 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VF_1186 IPR006233 Cystathionine beta-lyase, bacterial VF_1186 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_1186 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_1186 IPR015424 Pyridoxal phosphate-dependent transferase VF_1188 IPR001670 Alcohol dehydrogenase, iron-type VF_1188 IPR018211 Alcohol dehydrogenase, iron-type, conserved site VF_1189 IPR000926 GTP cyclohydrolase II, RibA VF_1189 IPR032677 VF_1189 VF_1191 IPR009056 Cytochrome c-like domain VF_1191 IPR010538 Protein of unknown function DUF1111 VF_1193 IPR008311 Uncharacterised conserved protein UCP028101 VF_1193 IPR011045 Nitrous oxide reductase, N-terminal VF_1193 IPR015943 WD40/YVTN repeat-like-containing domain VF_1194 IPR001279 Beta-lactamase-like VF_1195 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1196 IPR025079 Domain of unknown function DUF3943 VF_1197 IPR002091 Aromatic amino acid permease VF_1197 IPR013059 Tryptophan/tyrosine transporter VF_1197 IPR018227 Tryptophan/tyrosine permease VF_1198 IPR001453 Molybdopterin binding domain VF_1198 IPR008135 Competence-induced protein CinA VF_1198 IPR008136 CinA, C-terminal VF_1199 IPR001041 2Fe-2S ferredoxin-type domain VF_1199 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VF_1199 IPR012675 Beta-grasp domain VF_1200 IPR000160 GGDEF domain VF_1200 IPR011990 Tetratricopeptide-like helical domain VF_1200 IPR019734 Tetratricopeptide repeat VF_1200 IPR029016 GAF domain-like VF_1200 IPR029787 Nucleotide cyclase VF_1201 IPR000358 Ribonucleotide reductase small subunit VF_1201 IPR009078 Ferritin-like superfamily VF_1201 IPR012348 Ribonucleotide reductase-related VF_1201 IPR030475 VF_1201 VF_1202 IPR000788 Ribonucleotide reductase large subunit, C-terminal VF_1202 IPR005144 ATP-cone VF_1202 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal VF_1202 IPR013346 Ribonucleotide reductase, class I , alpha subunit VF_1202 IPR013509 Ribonucleotide reductase large subunit, N-terminal VF_1203 IPR010233 Ubiquinone biosynthesis O-methyltransferase VF_1203 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1204 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VF_1204 IPR005743 DNA gyrase, subunit A VF_1204 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel VF_1204 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain VF_1204 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VF_1204 IPR013760 DNA topoisomerase, type IIA-like domain VF_1204 IPR024946 Arginine repressor C-terminal-like domain VF_1205 IPR021974 Protein of unknown function DUF3581 VF_1206 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VF_1207 IPR013126 Heat shock protein 70 family VF_1207 IPR018181 Heat shock protein 70, conserved site VF_1208 IPR007374 ASCH domain VF_1208 IPR008314 Uncharacterised conserved protein UCP029143 VF_1208 IPR015947 PUA-like domain VF_1210 IPR009776 Sporulation stage 0, protein M VF_1211 IPR007138 Antibiotic biosynthesis monooxygenase-like domain VF_1211 IPR011008 Dimeric alpha-beta barrel VF_1212 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VF_1212 IPR018146 Glyoxalase I, conserved site VF_1212 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VF_1213 IPR027373 Ribbon-helix-helix domain VF_1214 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain VF_1214 IPR002320 Threonine-tRNA ligase, class IIa VF_1214 IPR004095 TGS VF_1214 IPR004154 Anticodon-binding VF_1214 IPR012675 Beta-grasp domain VF_1214 IPR012676 TGS-like VF_1214 IPR012947 Threonyl/alanyl tRNA synthetase, SAD VF_1214 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain VF_1216 IPR001288 Translation initiation factor 3 VF_1216 IPR019813 Translation initiation factor 3, conserved site VF_1216 IPR019814 Translation initiation factor 3, N-terminal VF_1216 IPR019815 Translation initiation factor 3, C-terminal VF_1217 IPR001706 Ribosomal protein L35, non-mitochondrial VF_1217 IPR018265 Ribosomal protein L35, conserved site VF_1217 IPR021137 Ribosomal protein L35 VF_1218 IPR005813 Ribosomal protein L20 VF_1219 IPR013112 FAD-binding 8 VF_1219 IPR013130 Ferric reductase transmembrane component-like domain VF_1219 IPR017938 Riboflavin synthase-like beta-barrel VF_1220 IPR003439 ABC transporter-like VF_1220 IPR003593 AAA+ ATPase domain VF_1220 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1221 IPR000522 ABC transporter, permease protein VF_1221 IPR029022 ABC transporter, BtuC-like VF_1222 IPR002491 ABC transporter periplasmic binding domain VF_1223 IPR003400 Biopolymer transport protein ExbD/TolR VF_1224 IPR002898 MotA/TolQ/ExbB proton channel VF_1225 IPR006260 TonB, C-terminal VF_1226 IPR006638 Elongator protein 3/MiaB/NifB VF_1226 IPR007197 Radical SAM VF_1226 IPR023404 Radical SAM, alpha/beta horseshoe VF_1226 IPR026332 Putative heme utilization radical SAM enzyme HutW VF_1227 IPR010413 Heme utilization carrier protein HutX like VF_1228 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain VF_1228 IPR012349 FMN-binding split barrel VF_1228 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VF_1229 IPR006531 Gp5 N-terminal VF_1229 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein VF_1229 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset VF_1230 IPR025391 Domain of unknown function DUF4123 VF_1234 IPR000531 TonB-dependent receptor, beta-barrel VF_1234 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor VF_1234 IPR011276 TonB-dependent haem/haemoglobin receptor VF_1234 IPR012910 TonB-dependent receptor, plug VF_1235 IPR002319 Phenylalanyl-tRNA synthetase VF_1235 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal VF_1235 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit VF_1235 IPR010978 tRNA-binding arm VF_1235 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial VF_1236 IPR002547 tRNA-binding domain VF_1236 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit VF_1236 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding VF_1236 IPR005146 B3/B4 tRNA-binding domain VF_1236 IPR005147 tRNA synthetase, B5-domain VF_1236 IPR009061 DNA binding domain, putative VF_1236 IPR012340 Nucleic acid-binding, OB-fold VF_1236 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VF_1237 IPR000119 Histone-like bacterial DNA-binding protein VF_1237 IPR005684 Integration host factor, alpha subunit VF_1237 IPR010992 Integration host factor (IHF)-like DNA-binding domain VF_1237 IPR020816 Histone-like DNA-binding protein, conserved site VF_1238 IPR007036 Succinylglutamate desuccinylase/aspartoacylase VF_1238 IPR016681 Succinylglutamate desuccinylase VF_1239 IPR001567 Peptidase M3A/M3B VF_1239 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VF_1239 IPR013647 Oligopeptidase F, N-terminal domain VF_1239 IPR024079 Metallopeptidase, catalytic domain VF_1240 IPR007551 Protein of unknown function DUF520 VF_1241 IPR006218 DAHP synthetase I/KDSA VF_1241 IPR006219 DHAP synthase, class 1 VF_1241 IPR013785 Aldolase-type TIM barrel VF_1242 IPR000121 PEP-utilising enzyme, C-terminal VF_1242 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VF_1244 IPR014464 Conserved virulence factor B VF_1244 IPR022967 RNA-binding domain, S1 VF_1245 IPR000160 GGDEF domain VF_1245 IPR004010 Cache domain VF_1245 IPR029787 Nucleotide cyclase VF_1246 IPR000036 Peptidase A26, omptin VF_1246 IPR020080 Outer membrane adhesin/peptidase omptin VF_1246 IPR023619 Peptidase A26 VF_1247 IPR018392 LysM domain VF_1247 IPR019454 Putative cell-wall binding lipoprotein YkyA-like VF_1248 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_1248 IPR015424 Pyridoxal phosphate-dependent transferase VF_1249 IPR012698 Phosphoenolpyruvate phosphomutase, core VF_1249 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VF_1250 IPR018385 C4-dicarboxylate anaerobic carrier-like VF_1252 IPR003767 Malate/L-lactate dehydrogenase VF_1253 IPR004839 Aminotransferase, class I/classII VF_1253 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_1253 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_1253 IPR015424 Pyridoxal phosphate-dependent transferase VF_1253 IPR027619 Putative C-S lyase VF_1254 IPR004770 Na+/H+ antiporter NhaC VF_1254 IPR018461 Na+/H+ antiporter, NhaC-like VF_1255 IPR000843 Transcription regulator HTH, LacI VF_1255 IPR010982 Lambda repressor-like, DNA-binding domain VF_1255 IPR028082 Periplasmic binding protein-like I VF_1256 IPR000396 Cyclic-AMP phosphodiesterase, class-II VF_1256 IPR001279 Beta-lactamase-like VF_1256 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site VF_1257 IPR009091 Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II VF_1258 IPR006683 Thioesterase superfamily VF_1258 IPR029069 HotDog domain VF_1259 IPR007339 Protein of unknown function DUF417 VF_1259 IPR016865 Uncharacterised conserved protein UCP028065, membrane VF_1260 IPR001647 DNA-binding HTH domain, TetR-type VF_1260 IPR009057 Homeodomain-like VF_1260 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VF_1260 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_1260 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VF_1261 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VF_1261 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VF_1262 IPR002109 Glutaredoxin VF_1262 IPR011767 Glutaredoxin active site VF_1262 IPR012336 Thioredoxin-like fold VF_1262 IPR014025 Glutaredoxin subgroup VF_1263 IPR015414 SNARE associated Golgi protein VF_1263 IPR032816 VF_1263 VF_1264 IPR006680 Amidohydrolase 1 VF_1264 IPR011059 Metal-dependent hydrolase, composite domain VF_1264 IPR032466 VF_1264 VF_1266 IPR002528 Multi antimicrobial extrusion protein VF_1269 IPR015927 Peptidase S24/S26A/S26B/S26C VF_1269 IPR019759 Peptidase S24/S26A/S26B VF_1269 IPR028360 Peptidase S24/S26, beta-ribbon domain VF_1270 IPR001638 Extracellular solute-binding protein, family 3 VF_1270 IPR018313 Extracellular solute-binding protein, family 3, conserved site VF_1271 IPR002781 Transmembrane protein TauE like VF_1272 IPR001059 Translation elongation factor P/YeiP, central VF_1272 IPR008991 Translation protein SH3-like domain VF_1272 IPR011897 Translation elongation factor P-like, YeiP VF_1272 IPR012340 Nucleic acid-binding, OB-fold VF_1272 IPR013185 Translation elongation factor, KOW-like VF_1272 IPR013852 Translation elongation factor P/YeiP, conserved site VF_1272 IPR014722 Ribosomal protein L2 domain 2 VF_1272 IPR015365 Elongation factor P, C-terminal VF_1272 IPR020599 Translation elongation factor P/YeiP VF_1273 IPR010619 Domain of unknown function DUF1212 VF_1273 IPR024528 Domain of unknown function DUF3815 VF_1274 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p VF_1274 IPR011023 Nop2p VF_1274 IPR023267 RNA (C5-cytosine) methyltransferase VF_1274 IPR023545 rRNA small subunit methyltransferase F VF_1274 IPR027391 rRNA small subunit methyltransferase F, C-terminal domain VF_1274 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1274 IPR031341 VF_1274 VF_1275 IPR003399 Mammalian cell entry-related VF_1276 IPR005219 Conserved hypothetical protein CHP00155 VF_1276 IPR007498 Paraquat-inducible protein A VF_1277 IPR003439 ABC transporter-like VF_1277 IPR003593 AAA+ ATPase domain VF_1277 IPR011527 ABC transporter type 1, transmembrane domain VF_1277 IPR017871 ABC transporter, conserved site VF_1277 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1278 IPR000614 Free Met sulfoxide reductase conserved site VF_1278 IPR003018 GAF domain VF_1278 IPR029016 GAF domain-like VF_1279 IPR016103 ProQ/FinO domain VF_1279 IPR023529 Transporter ProP effector, ProQ VF_1280 IPR001478 PDZ domain VF_1280 IPR004447 C-terminal-processing peptidase S41A VF_1280 IPR005151 Tail specific protease VF_1280 IPR012530 B melanoma antigen VF_1280 IPR020992 Tail specific protease, C-terminal VF_1280 IPR029045 ClpP/crotonase-like domain VF_1282 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase VF_1282 IPR012779 Peptidase M1, alanyl aminopeptidase VF_1282 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal VF_1282 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VF_1283 IPR021363 Protein of unknown function DUF2835 VF_1284 IPR007780 Bacterial NAD-glutamate dehydrogenase VF_1284 IPR016040 NAD(P)-binding domain VF_1284 IPR028971 NAD-glutamate dehydrogenase VF_1285 IPR001295 Dihydroorotate dehydrogenase, conserved site VF_1285 IPR005719 Dihydroorotate dehydrogenase, class 2 VF_1285 IPR005720 Dihydroorotate dehydrogenase domain VF_1285 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 VF_1285 IPR013785 Aldolase-type TIM barrel VF_1286 IPR009809 Cell division protein ZapC VF_1287 IPR000241 Putative RNA methylase domain VF_1287 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VF_1287 IPR004114 THUMP VF_1287 IPR017244 Ribosomal RNA large subunit methyltransferase K/L VF_1287 IPR019614 S-adenosylmethionine-dependent methyltransferase VF_1287 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1288 IPR008554 Glutaredoxin-like VF_1288 IPR012336 Thioredoxin-like fold VF_1289 IPR003439 ABC transporter-like VF_1289 IPR003593 AAA+ ATPase domain VF_1289 IPR017871 ABC transporter, conserved site VF_1289 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1289 IPR032524 VF_1289 VF_1289 IPR032781 VF_1289 VF_1290 IPR022562 Protein of unknown function DUF3466 VF_1291 IPR007040 Ribosome modulation factor VF_1291 IPR023200 Ribosome modulation factor-like domain VF_1292 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA VF_1292 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VF_1292 IPR029069 HotDog domain VF_1293 IPR008269 Peptidase S16, Lon C-terminal VF_1293 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_1293 IPR020568 Ribosomal protein S5 domain 2-type fold VF_1293 IPR027065 Lon protease VF_1294 IPR009390 Macrodomain Ter protein, MatP VF_1295 IPR010835 Protein of unknown function DUF1439 VF_1296 IPR000014 PAS domain VF_1296 IPR001789 Signal transduction response regulator, receiver domain VF_1296 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1296 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_1296 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_1296 IPR011006 CheY-like superfamily VF_1297 IPR013702 FIST domain, N-terminal VF_1297 IPR019494 FIST C domain VF_1299 IPR000883 Cytochrome c oxidase subunit I VF_1299 IPR004677 Cytochrome c oxidase cbb3-type, subunit I VF_1299 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site VF_1299 IPR023616 Cytochrome c oxidase, subunit I domain VF_1300 IPR000883 Cytochrome c oxidase subunit I VF_1300 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VF_1300 IPR009056 Cytochrome c-like domain VF_1301 IPR008621 Cbb3-type cytochrome oxidase component VF_1302 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VF_1302 IPR008168 Cytochrome c, class IC VF_1302 IPR009056 Cytochrome c-like domain VF_1302 IPR032858 VF_1302 VF_1303 IPR008620 FixH VF_1304 IPR001757 Cation-transporting P-type ATPase VF_1304 IPR006121 Heavy metal-associated domain, HMA VF_1304 IPR008250 P-type ATPase, A domain VF_1304 IPR018303 P-type ATPase, phosphorylation site VF_1304 IPR021993 Putative metal-binding domain of cation transport ATPase VF_1304 IPR023214 HAD-like domain VF_1304 IPR027256 Cation-transporting P-type ATPase, subfamily IB VF_1306 IPR004714 Cytochrome oxidase maturation protein cbb3-type VF_1308 IPR000595 Cyclic nucleotide-binding domain VF_1308 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1308 IPR012318 Helix-turn-helix motif, Crp-type VF_1308 IPR014710 RmlC-like jelly roll fold VF_1308 IPR018335 Transcription regulator HTH, Crp-type, conserved site VF_1308 IPR018490 Cyclic nucleotide-binding-like VF_1310 IPR006016 UspA VF_1310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1311 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase VF_1311 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA VF_1311 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1312 IPR021370 Protein of unknown function DUF2987 VF_1313 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VF_1315 IPR003439 ABC transporter-like VF_1315 IPR003593 AAA+ ATPase domain VF_1315 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit VF_1315 IPR008995 Molybdate/tungstate binding, C-terminal VF_1315 IPR013611 Transport-associated OB, type 2 VF_1315 IPR017871 ABC transporter, conserved site VF_1315 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1316 IPR000515 MetI-like domain VF_1317 IPR000515 MetI-like domain VF_1318 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VF_1319 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein VF_1320 IPR003000 Sirtuin family VF_1320 IPR026591 Sirtuin family, catalytic core small domain VF_1320 IPR027546 Sirtuin, class III VF_1320 IPR029035 DHS-like NAD/FAD-binding domain VF_1321 IPR000847 Transcription regulator HTH, LysR VF_1321 IPR005119 LysR, substrate-binding VF_1321 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1322 IPR002668 Concentrative nucleoside transporter N-terminal domain VF_1322 IPR008276 Concentrative nucleoside transporter VF_1322 IPR011642 Nucleoside recognition Gate VF_1322 IPR011657 Concentrative nucleoside transporter C-terminal domain VF_1322 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VF_1323 IPR007138 Antibiotic biosynthesis monooxygenase-like domain VF_1323 IPR011008 Dimeric alpha-beta barrel VF_1324 IPR001646 Pentapeptide repeat VF_1326 IPR001451 Bacterial transferase hexapeptide repeat VF_1326 IPR011004 Trimeric LpxA-like VF_1326 IPR018357 Hexapeptide transferase, conserved site VF_1327 IPR007896 Transmembrane pair, bacterial VF_1328 IPR000182 GNAT domain VF_1328 IPR016181 Acyl-CoA N-acyltransferase VF_1329 IPR008258 Lytic transglycosylase-like SLT domain VF_1329 IPR008939 Lytic transglycosylase, superhelical U-shaped VF_1329 IPR012289 Lytic transglycosylase, superhelical linker VF_1329 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain VF_1329 IPR023346 Lysozyme-like domain VF_1330 IPR002509 Polysaccharide deacetylase VF_1330 IPR003610 Carbohydrate-binding module family 5/12 VF_1330 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VF_1332 IPR002528 Multi antimicrobial extrusion protein VF_1333 IPR000847 Transcription regulator HTH, LysR VF_1333 IPR005119 LysR, substrate-binding VF_1333 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1334 IPR007530 Aminoglycoside 6-adenylyltransferase VF_1335 IPR003607 HD/PDEase domain VF_1335 IPR006674 HD domain VF_1337 IPR001451 Bacterial transferase hexapeptide repeat VF_1337 IPR011004 Trimeric LpxA-like VF_1337 IPR024688 Maltose/galactoside acetyltransferase VF_1338 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VF_1341 IPR002509 Polysaccharide deacetylase VF_1341 IPR006879 Uncharacterised protein family UPF0249/HpnK VF_1341 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VF_1342 IPR011051 RmlC-like cupin domain VF_1342 IPR013096 Cupin 2, conserved barrel VF_1342 IPR014710 RmlC-like jelly roll fold VF_1344 IPR000182 GNAT domain VF_1344 IPR016181 Acyl-CoA N-acyltransferase VF_1345 IPR000182 GNAT domain VF_1345 IPR016181 Acyl-CoA N-acyltransferase VF_1347 IPR004624 PhnA protein VF_1347 IPR013987 PhnA protein, N-terminal VF_1347 IPR013988 PhnA protein, C-terminal VF_1349 IPR000209 Peptidase S8/S53 domain VF_1349 IPR009020 Proteinase inhibitor, propeptide VF_1349 IPR010259 Proteinase inhibitor I9 VF_1349 IPR015500 Peptidase S8, subtilisin-related VF_1349 IPR022398 Peptidase S8, subtilisin, His-active site VF_1349 IPR023828 Peptidase S8, subtilisin, Ser-active site VF_1350 IPR000160 GGDEF domain VF_1350 IPR011990 Tetratricopeptide-like helical domain VF_1350 IPR019734 Tetratricopeptide repeat VF_1350 IPR029787 Nucleotide cyclase VF_1351 IPR010424 Ethanolamine utilisation EutQ VF_1351 IPR011051 RmlC-like cupin domain VF_1351 IPR014710 RmlC-like jelly roll fold VF_1352 IPR000086 NUDIX hydrolase domain VF_1352 IPR015797 NUDIX hydrolase domain-like VF_1353 IPR010982 Lambda repressor-like, DNA-binding domain VF_1353 IPR032758 VF_1353 VF_1354 IPR007421 ATPase, AAA-4 VF_1354 IPR025831 ATP-dependent DNA helicase RecG C-terminal domain VF_1356 IPR021352 Protein of unknown function DUF2971 VF_1358 IPR006471 Formate dehydrogenase, gamma subunit VF_1358 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase VF_1358 IPR016174 Di-haem cytochrome, transmembrane VF_1359 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VF_1359 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_1360 IPR006656 Molybdopterin oxidoreductase VF_1360 IPR006657 Molydopterin dinucleotide-binding domain VF_1360 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VF_1360 IPR009010 Aspartate decarboxylase-like domain VF_1360 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VF_1361 IPR014177 Formate dehydrogenase, TAT signal-containing VF_1361 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VF_1362 IPR020945 DMSO/Nitrate reductase chaperone VF_1363 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VF_1363 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_1364 IPR021735 Protein of unknown function DUF3306 VF_1365 IPR021736 Protein of unknown function DUF3305 VF_1366 IPR003786 Protein FdhD VF_1366 IPR016193 Cytidine deaminase-like VF_1367 IPR001638 Extracellular solute-binding protein, family 3 VF_1367 IPR003607 HD/PDEase domain VF_1367 IPR006674 HD domain VF_1368 IPR000189 Prokaryotic transglycosylase, active site VF_1368 IPR008258 Lytic transglycosylase-like SLT domain VF_1368 IPR023346 Lysozyme-like domain VF_1368 IPR024570 Murein transglycosylase-C, N-terminal VF_1369 IPR003660 HAMP linker domain VF_1369 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1369 IPR029151 Periplasmic sensor domain-like VF_1369 IPR033479 VF_1369 VF_1370 IPR000816 Peptidase C15, pyroglutamyl peptidase I VF_1370 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like VF_1370 IPR029762 Pyroglutamyl peptidase I, bacterial-type VF_1371 IPR009323 Protein of unknown function DUF979 VF_1372 IPR010374 Protein of unknown function DUF969 VF_1373 IPR001046 NRAMP family VF_1374 IPR003778 Allophanate hydrolase subunit 2 VF_1374 IPR029000 Cyclophilin-like domain VF_1375 IPR003833 Allophanate hydrolase subunit 1 VF_1375 IPR010016 Sensor histidine kinase inhibitor, KipI family VF_1375 IPR024946 Arginine repressor C-terminal-like domain VF_1375 IPR029000 Cyclophilin-like domain VF_1376 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF VF_1376 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel VF_1377 IPR009906 Protein of unknown function DUF1445 VF_1377 IPR016938 Uncharacterised protein family UPF0317 VF_1378 IPR000847 Transcription regulator HTH, LysR VF_1378 IPR005119 LysR, substrate-binding VF_1378 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1379 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase VF_1379 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VF_1379 IPR017850 Alkaline-phosphatase-like, core domain VF_1380 IPR001466 Beta-lactamase-related VF_1380 IPR012338 Beta-lactamase/transpeptidase-like VF_1382 IPR000182 GNAT domain VF_1382 IPR016181 Acyl-CoA N-acyltransferase VF_1383 IPR001539 Peptidase U32 VF_1383 IPR020988 Peptidase U32, collagenase VF_1384 IPR004045 Glutathione S-transferase, N-terminal VF_1384 IPR010987 Glutathione S-transferase, C-terminal-like VF_1384 IPR012336 Thioredoxin-like fold VF_1385 IPR000182 GNAT domain VF_1385 IPR016181 Acyl-CoA N-acyltransferase VF_1386 IPR000182 GNAT domain VF_1386 IPR016181 Acyl-CoA N-acyltransferase VF_1387 IPR001763 Rhodanese-like domain VF_1388 IPR016040 NAD(P)-binding domain VF_1389 IPR000182 GNAT domain VF_1389 IPR016181 Acyl-CoA N-acyltransferase VF_1390 IPR000726 Glycoside hydrolase, family 19, catalytic VF_1390 IPR003610 Carbohydrate-binding module family 5/12 VF_1390 IPR023346 Lysozyme-like domain VF_1394 IPR000060 BCCT transporter family VF_1396 IPR001789 Signal transduction response regulator, receiver domain VF_1396 IPR001867 Signal transduction response regulator, C-terminal VF_1396 IPR011006 CheY-like superfamily VF_1396 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1396 IPR016032 Signal transduction response regulator, C-terminal effector VF_1397 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1397 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_1397 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_1398 IPR025902 LssY-like C-terminal domain VF_1398 IPR032816 VF_1398 VF_1398 IPR032818 VF_1398 VF_1399 IPR001173 Glycosyltransferase 2-like VF_1399 IPR029044 Nucleotide-diphospho-sugar transferases VF_1400 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1400 IPR003660 HAMP linker domain VF_1400 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_1400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_1400 IPR029151 Periplasmic sensor domain-like VF_1400 IPR033463 VF_1400 VF_1401 IPR001789 Signal transduction response regulator, receiver domain VF_1401 IPR002078 RNA polymerase sigma factor 54 interaction domain VF_1401 IPR002197 DNA binding HTH domain, Fis-type VF_1401 IPR003593 AAA+ ATPase domain VF_1401 IPR009057 Homeodomain-like VF_1401 IPR011006 CheY-like superfamily VF_1401 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VF_1401 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VF_1401 IPR025944 Sigma-54 interaction domain, conserved site VF_1401 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1402 IPR024370 PBP domain VF_1403 IPR000515 MetI-like domain VF_1404 IPR003439 ABC transporter-like VF_1404 IPR003593 AAA+ ATPase domain VF_1404 IPR017871 ABC transporter, conserved site VF_1404 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1405 IPR013482 Molybdenum cofactor guanylyltransferase VF_1405 IPR025877 MobA-like NTP transferase domain VF_1405 IPR029044 Nucleotide-diphospho-sugar transferases VF_1406 IPR001453 Molybdopterin binding domain VF_1406 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain VF_1406 IPR005110 MoeA, N-terminal and linker domain VF_1406 IPR005111 MoeA, C-terminal, domain IV VF_1406 IPR008284 Molybdenum cofactor biosynthesis, conserved site VF_1406 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VF_1406 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1407 IPR004027 SEC-C motif VF_1407 IPR026368 SWIM/SEC-C metal-binding motif protein, PBPRA1643 family VF_1407 IPR032710 VF_1407 VF_1408 IPR000600 ROK VF_1408 IPR023505 N-acetyl-D-glucosamine kinase VF_1409 IPR005636 DTW VF_1410 IPR004697 AbgT VF_1411 IPR000064 Endopeptidase, NLPC/P60 domain VF_1412 IPR020979 Uncharacterised protein family A0KLC6 VF_1413 IPR011009 Protein kinase-like domain VF_1413 IPR016477 Fructosamine/Ketosamine-3-kinase VF_1414 IPR001783 Lumazine-binding protein VF_1414 IPR017938 Riboflavin synthase-like beta-barrel VF_1414 IPR023366 ATP synthase subunit alpha-like domain VF_1414 IPR026017 Lumazine-binding domain VF_1415 IPR002528 Multi antimicrobial extrusion protein VF_1416 IPR011989 Armadillo-like helical VF_1416 IPR011990 Tetratricopeptide-like helical domain VF_1416 IPR016024 Armadillo-type fold VF_1416 IPR019734 Tetratricopeptide repeat VF_1417 IPR007197 Radical SAM VF_1417 IPR013785 Aldolase-type TIM barrel VF_1417 IPR023867 Anaerobic sulphatase maturase, radical SAM VF_1417 IPR023885 4Fe4S-binding SPASM domain VF_1418 IPR005532 Formylglycine-generating sulphatase enzyme domain VF_1418 IPR016187 C-type lectin fold VF_1419 IPR000847 Transcription regulator HTH, LysR VF_1419 IPR005119 LysR, substrate-binding VF_1419 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1420 IPR025738 Aerotolerance-related protein BatD VF_1421 IPR002035 von Willebrand factor, type A VF_1421 IPR011990 Tetratricopeptide-like helical domain VF_1422 IPR002035 von Willebrand factor, type A VF_1423 IPR025489 Protein of unknown function (DUF4381 VF_1424 IPR002035 von Willebrand factor, type A VF_1424 IPR002881 Domain of unknown function DUF58 VF_1425 IPR011703 ATPase, AAA-3 VF_1425 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted VF_1425 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1426 IPR011031 Multihaem cytochrome VF_1426 IPR011990 Tetratricopeptide-like helical domain VF_1426 IPR019734 Tetratricopeptide repeat VF_1426 IPR023155 Cytochrome c-552/4 VF_1427 IPR000917 Sulfatase VF_1427 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VF_1427 IPR017850 Alkaline-phosphatase-like, core domain VF_1428 IPR000917 Sulfatase VF_1428 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VF_1428 IPR017850 Alkaline-phosphatase-like, core domain VF_1429 IPR009057 Homeodomain-like VF_1430 IPR000917 Sulfatase VF_1430 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VF_1430 IPR017850 Alkaline-phosphatase-like, core domain VF_1432 IPR002852 Uncharacterised protein family UPF0251 VF_1432 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1432 IPR013324 RNA polymerase sigma factor, region 3/4 VF_1433 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VF_1434 IPR007495 Protein of unknown function DUF539 VF_1435 IPR025294 Protein of unknown function DUF4156 VF_1436 IPR005185 Protein of unknown function DUF307 VF_1436 IPR031308 VF_1436 VF_1437 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VF_1437 IPR027385 Outer membrane protein beta-barrel VF_1439 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VF_1439 IPR001650 Helicase, C-terminal VF_1439 IPR011545 DEAD/DEAH box helicase domain VF_1439 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_1439 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1442 IPR002767 Protein of unknown function DUF77 VF_1442 IPR029756 MTH1187/YkoF-like VF_1443 IPR001387 Cro/C1-type helix-turn-helix domain VF_1443 IPR010982 Lambda repressor-like, DNA-binding domain VF_1444 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU VF_1444 IPR023064 D-ribose pyranase VF_1444 IPR023750 RbsD-like domain VF_1445 IPR003439 ABC transporter-like VF_1445 IPR003593 AAA+ ATPase domain VF_1445 IPR017871 ABC transporter, conserved site VF_1445 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1446 IPR001851 ABC transporter, permease VF_1447 IPR025997 Periplasmic binding protein domain VF_1447 IPR028082 Periplasmic binding protein-like I VF_1448 IPR002139 Ribokinase VF_1448 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VF_1448 IPR011611 Carbohydrate kinase PfkB VF_1448 IPR011877 Ribokinase, bacterial VF_1448 IPR029056 Ribokinase-like VF_1449 IPR000843 Transcription regulator HTH, LacI VF_1449 IPR010982 Lambda repressor-like, DNA-binding domain VF_1449 IPR028082 Periplasmic binding protein-like I VF_1450 IPR012310 DNA ligase, ATP-dependent, central VF_1450 IPR012340 Nucleic acid-binding, OB-fold VF_1450 IPR029319 DNA ligase, OB-like domain VF_1451 IPR001322 Lamin Tail Domain VF_1451 IPR005135 Endonuclease/exonuclease/phosphatase VF_1451 IPR020008 GlyGly-CTERM domain VF_1452 IPR002528 Multi antimicrobial extrusion protein VF_1454 IPR001463 Sodium:alanine symporter VF_1455 IPR006685 Mechanosensitive ion channel MscS VF_1455 IPR010920 Like-Sm (LSM) domain VF_1455 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VF_1455 IPR011066 Mechanosensitive ion channel MscS, C-terminal VF_1456 IPR001123 Lysine-type exporter protein (LYSE/YGGA) VF_1457 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase VF_1458 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VF_1458 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VF_1459 IPR006056 Enamine/imine deaminase YjgF-like VF_1459 IPR006175 YjgF/Yer057p/UK114 family VF_1459 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like VF_1460 IPR000847 Transcription regulator HTH, LysR VF_1460 IPR005119 LysR, substrate-binding VF_1460 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1461 IPR022205 Protein of unknown function DUF3732 VF_1461 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1464 IPR000212 DNA helicase, UvrD/REP type VF_1464 IPR011578 Restriction endonuclease, FokI, C-terminal/endonuclease I, core VF_1464 IPR014016 UvrD-like Helicase, ATP-binding domain VF_1464 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1465 IPR000212 DNA helicase, UvrD/REP type VF_1465 IPR013498 DNA topoisomerase, type IA, zn finger VF_1465 IPR014016 UvrD-like Helicase, ATP-binding domain VF_1465 IPR014017 DNA helicase, UvrD-like, C-terminal VF_1465 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1466 IPR002068 Alpha crystallin/Hsp20 domain VF_1466 IPR008978 HSP20-like chaperone VF_1466 IPR031107 VF_1466 VF_1467 IPR012725 Chaperone DnaK VF_1467 IPR013126 Heat shock protein 70 family VF_1467 IPR018181 Heat shock protein 70, conserved site VF_1467 IPR029047 Heat shock protein 70kD, peptide-binding domain VF_1467 IPR029048 Heat shock protein 70kD, C-terminal domain VF_1469 IPR001387 Cro/C1-type helix-turn-helix domain VF_1469 IPR010982 Lambda repressor-like, DNA-binding domain VF_1470 IPR012893 HipA-like, C-terminal VF_1470 IPR012894 HipA, N-terminal subdomain 2 VF_1470 IPR017508 HipA, N-terminal subdomain 1 VF_1471 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal VF_1471 IPR007357 Deoxyribodipyrimidine photolyase-related protein VF_1472 IPR017136 Uncharacterised conserved protein UCP037205 VF_1473 IPR021432 Protein of unknown function DUF3081 VF_1474 IPR008979 Galactose-binding domain-like VF_1474 IPR013857 NADH:ubiquinone oxidoreductase intermediate-associated protein 30 VF_1475 IPR000847 Transcription regulator HTH, LysR VF_1475 IPR005119 LysR, substrate-binding VF_1475 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1476 IPR011059 Metal-dependent hydrolase, composite domain VF_1476 IPR013108 Amidohydrolase 3 VF_1476 IPR032466 VF_1476 VF_1477 IPR001623 DnaJ domain VF_1477 IPR006597 Sel1-like VF_1477 IPR011990 Tetratricopeptide-like helical domain VF_1479 IPR000425 Major intrinsic protein VF_1479 IPR022357 Major intrinsic protein, conserved site VF_1479 IPR023271 Aquaporin-like VF_1479 IPR023743 Aquaporin Z VF_1480 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VF_1480 IPR027016 Uncharacterised protein with YceI domain VF_1481 IPR001460 Penicillin-binding protein, transpeptidase VF_1481 IPR005311 Penicillin-binding protein, dimerisation domain VF_1481 IPR012338 Beta-lactamase/transpeptidase-like VF_1481 IPR017790 Penicillin-binding protein 2 VF_1482 IPR012337 Ribonuclease H-like domain VF_1482 IPR013520 Exonuclease, RNase T/DNA polymerase III VF_1482 IPR013620 Exonuclease C-terminal VF_1482 IPR023607 Exodeoxyribonuclease I VF_1483 IPR005538 LrgA/CidA family VF_1484 IPR005261 Conserved hypothetical protein CHP00659 VF_1484 IPR007300 CidB/LrgB family VF_1485 IPR002125 CMP/dCMP deaminase, zinc-binding VF_1485 IPR006263 Cytidine deaminase, homodimeric VF_1485 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain VF_1485 IPR016192 APOBEC/CMP deaminase, zinc-binding VF_1485 IPR016193 Cytidine deaminase-like VF_1485 IPR020797 Cytidine deaminase, bacteria VF_1486 IPR000120 Amidase VF_1486 IPR023631 Amidase signature domain VF_1487 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VF_1487 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VF_1487 IPR005862 Phosphoribosylglycinamide formyltransferase 2 VF_1487 IPR011054 Rudiment single hybrid motif VF_1487 IPR013815 ATP-grasp fold, subdomain 1 VF_1487 IPR013816 ATP-grasp fold, subdomain 2 VF_1487 IPR016185 Pre-ATP-grasp domain VF_1488 IPR000796 Aspartate/other aminotransferase VF_1488 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site VF_1488 IPR004839 Aminotransferase, class I/classII VF_1488 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_1488 IPR015424 Pyridoxal phosphate-dependent transferase VF_1489 IPR025714 Methyltransferase domain VF_1489 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1490 IPR000847 Transcription regulator HTH, LysR VF_1490 IPR005119 LysR, substrate-binding VF_1490 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1492 IPR009078 Ferritin-like superfamily VF_1492 IPR010386 tRNA-hydroxylase MiaE VF_1492 IPR012347 Ferritin-related VF_1493 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1495 IPR005646 Protein of unknown function DUF342 VF_1496 IPR002109 Glutaredoxin VF_1496 IPR011767 Glutaredoxin active site VF_1496 IPR012336 Thioredoxin-like fold VF_1496 IPR014025 Glutaredoxin subgroup VF_1497 IPR021307 Protein of unknown function DUF2884 VF_1498 IPR013816 ATP-grasp fold, subdomain 2 VF_1498 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type VF_1498 IPR028923 SAICAR synthetase/ADE2, N-terminal VF_1499 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VF_1499 IPR027385 Outer membrane protein beta-barrel VF_1500 IPR001650 Helicase, C-terminal VF_1500 IPR003593 AAA+ ATPase domain VF_1500 IPR007502 Helicase-associated domain VF_1500 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type VF_1500 IPR011545 DEAD/DEAH box helicase domain VF_1500 IPR011709 Domain of unknown function DUF1605 VF_1500 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_1500 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal VF_1500 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1501 IPR007453 Sulphur transfer protein DsrC/TusE VF_1501 IPR025526 DsrC-like domain VF_1502 IPR001792 Acylphosphatase-like domain VF_1502 IPR017968 Acylphosphatase, conserved site VF_1503 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1504 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1504 IPR004090 Chemotaxis methyl-accepting receptor VF_1505 IPR002478 PUA domain VF_1505 IPR015947 PUA-like domain VF_1505 IPR019614 S-adenosylmethionine-dependent methyltransferase VF_1505 IPR023542 rRNA large subunit methyltransferase I VF_1505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1506 IPR010221 VCBS repeat VF_1506 IPR011049 Serralysin-like metalloprotease, C-terminal VF_1506 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VF_1507 IPR021284 Protein of unknown function DUF2750 VF_1508 IPR004669 C4-dicarboxylate anaerobic carrier VF_1508 IPR018385 C4-dicarboxylate anaerobic carrier-like VF_1509 IPR006680 Amidohydrolase 1 VF_1509 IPR010229 Peptidase M38, beta-aspartyl dipeptidase VF_1509 IPR011059 Metal-dependent hydrolase, composite domain VF_1509 IPR032466 VF_1509 VF_1510 IPR000847 Transcription regulator HTH, LysR VF_1510 IPR005119 LysR, substrate-binding VF_1510 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1511 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VF_1511 IPR006146 5'-Nucleotidase, conserved site VF_1511 IPR006179 5'-Nucleotidase/apyrase VF_1511 IPR008334 5'-Nucleotidase, C-terminal VF_1511 IPR029052 Metallo-dependent phosphatase-like VF_1512 IPR008854 TPMT family VF_1512 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification VF_1512 IPR025835 Thiopurine S-methyltransferase VF_1512 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1513 IPR001991 Sodium:dicarboxylate symporter VF_1514 IPR012337 Ribonuclease H-like domain VF_1514 IPR013520 Exonuclease, RNase T/DNA polymerase III VF_1515 IPR000160 GGDEF domain VF_1515 IPR006189 CHASE VF_1515 IPR029787 Nucleotide cyclase VF_1516 IPR021212 Domain of unknown function DUF2760 VF_1517 IPR013126 Heat shock protein 70 family VF_1517 IPR018181 Heat shock protein 70, conserved site VF_1518 IPR013126 Heat shock protein 70 family VF_1518 IPR021030 Protein of unknown function DUF3731 VF_1519 IPR021334 Protein of unknown function DUF2947 VF_1520 IPR011335 Restriction endonuclease type II-like VF_1520 IPR011856 tRNA endonuclease-like domain VF_1520 IPR015093 Protein of unknown function DUF1887 VF_1521 IPR000845 Nucleoside phosphorylase domain VF_1521 IPR010058 Uridine phosphorylase VF_1521 IPR018016 Nucleoside phosphorylase, conserved site VF_1521 IPR018017 Nucleoside phosphorylase VF_1522 IPR001757 Cation-transporting P-type ATPase VF_1522 IPR006121 Heavy metal-associated domain, HMA VF_1522 IPR008250 P-type ATPase, A domain VF_1522 IPR017969 Heavy-metal-associated, conserved site VF_1522 IPR018303 P-type ATPase, phosphorylation site VF_1522 IPR023214 HAD-like domain VF_1522 IPR023299 P-type ATPase, cytoplasmic domain N VF_1522 IPR027256 Cation-transporting P-type ATPase, subfamily IB VF_1523 IPR000644 CBS domain VF_1525 IPR004113 FAD-linked oxidase, C-terminal VF_1525 IPR006094 FAD linked oxidase, N-terminal VF_1525 IPR009051 Alpha-helical ferredoxin VF_1525 IPR016164 FAD-linked oxidase-like, C-terminal VF_1525 IPR016166 FAD-binding, type 2 VF_1525 IPR016167 FAD-binding, type 2, subdomain 1 VF_1525 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 VF_1525 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VF_1525 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_1526 IPR024513 Protein of unknown function DUF3334 VF_1526 IPR028976 CheC-like domain VF_1527 IPR004550 L-asparaginase, type II VF_1527 IPR006034 Asparaginase/glutaminase VF_1527 IPR020827 Asparaginase/glutaminase, active site 1 VF_1527 IPR027473 L-asparaginase, C-terminal domain VF_1527 IPR027474 L-asparaginase, N-terminal VF_1527 IPR027475 Asparaginase/glutaminase, active site 2 VF_1528 IPR016868 Bacteriophage B3, Orf5 VF_1528 IPR024498 Domain of unknown function DUF2786 VF_1530 IPR000524 Transcription regulator HTH, GntR VF_1530 IPR011663 UbiC transcription regulator-associated VF_1530 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1530 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VF_1531 IPR000878 Tetrapyrrole methylase VF_1531 IPR006367 Sirohaem synthase, N-terminal VF_1531 IPR014777 Tetrapyrrole methylase, subdomain 1 VF_1531 IPR016040 NAD(P)-binding domain VF_1531 IPR019478 Sirohaem synthase, dimerisation domain VF_1531 IPR028281 Siroheme synthase, central domain VF_1532 IPR001638 Extracellular solute-binding protein, family 3 VF_1532 IPR018313 Extracellular solute-binding protein, family 3, conserved site VF_1533 IPR000515 MetI-like domain VF_1533 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VF_1534 IPR000515 MetI-like domain VF_1534 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VF_1535 IPR003439 ABC transporter-like VF_1535 IPR003593 AAA+ ATPase domain VF_1535 IPR017871 ABC transporter, conserved site VF_1535 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1535 IPR030679 VF_1535 VF_1536 IPR006213 Bax inhibitor 1, conserved site VF_1536 IPR006214 Bax inhibitor 1-related VF_1537 IPR006597 Sel1-like VF_1537 IPR011990 Tetratricopeptide-like helical domain VF_1538 IPR003593 AAA+ ATPase domain VF_1538 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1539 IPR006685 Mechanosensitive ion channel MscS VF_1539 IPR010920 Like-Sm (LSM) domain VF_1539 IPR011066 Mechanosensitive ion channel MscS, C-terminal VF_1540 IPR001440 Tetratricopeptide TPR1 VF_1540 IPR006597 Sel1-like VF_1540 IPR011990 Tetratricopeptide-like helical domain VF_1540 IPR019734 Tetratricopeptide repeat VF_1541 IPR000086 NUDIX hydrolase domain VF_1541 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VF_1541 IPR015797 NUDIX hydrolase domain-like VF_1542 IPR000182 GNAT domain VF_1542 IPR016181 Acyl-CoA N-acyltransferase VF_1543 IPR005017 Membrane protein, aromatic hydrocarbon degradation VF_1544 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VF_1545 IPR000847 Transcription regulator HTH, LysR VF_1545 IPR005119 LysR, substrate-binding VF_1545 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1546 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VF_1547 IPR001920 Asp/Glu racemase VF_1547 IPR004380 Aspartate racemase VF_1547 IPR015942 Asp/Glu/hydantoin racemase VF_1548 IPR005616 Cytochrome C biogenesis protein CcmH VF_1548 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF VF_1549 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE VF_1549 IPR012336 Thioredoxin-like fold VF_1549 IPR013740 Redoxin VF_1550 IPR002541 Cytochrome c assembly protein VF_1550 IPR003567 Cytochrome c-type biogenesis protein VF_1550 IPR003568 Cytochrome c-type biogenesis protein CcmF VF_1550 IPR032523 VF_1550 VF_1551 IPR005614 NrfD family VF_1551 IPR017566 NrfD VF_1552 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VF_1552 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VF_1552 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_1553 IPR011031 Multihaem cytochrome VF_1553 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit VF_1553 IPR023155 Cytochrome c-552/4 VF_1554 IPR003321 Cytochrome c552 VF_1554 IPR011031 Multihaem cytochrome VF_1554 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit VF_1554 IPR023155 Cytochrome c-552/4 VF_1555 IPR011990 Tetratricopeptide-like helical domain VF_1556 IPR003187 Phospholipase A1 VF_1557 IPR001650 Helicase, C-terminal VF_1557 IPR007502 Helicase-associated domain VF_1557 IPR011545 DEAD/DEAH box helicase domain VF_1557 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_1557 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1558 IPR001891 Malic oxidoreductase VF_1558 IPR012301 Malic enzyme, N-terminal domain VF_1558 IPR012302 Malic enzyme, NAD-binding VF_1558 IPR015884 Malic enzyme, conserved site VF_1558 IPR016040 NAD(P)-binding domain VF_1558 IPR023667 NAD-dependent malic enzyme, proteobacteria VF_1559 IPR021813 Protein of unknown function DUF3392 VF_1560 IPR003848 Domain of unknown function DUF218 VF_1560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1561 IPR000160 GGDEF domain VF_1561 IPR008979 Galactose-binding domain-like VF_1561 IPR029787 Nucleotide cyclase VF_1562 IPR010583 MltA-interacting MipA VF_1564 IPR003339 ABC/ECF transporter, transmembrane component VF_1565 IPR003439 ABC transporter-like VF_1565 IPR003593 AAA+ ATPase domain VF_1565 IPR017871 ABC transporter, conserved site VF_1565 IPR022216 ABC cobalt transporter VF_1565 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1566 IPR009825 ECF transporter, substrate-specific component-like VF_1566 IPR022914 Protein of unknown function UPF0397 VF_1567 IPR015943 WD40/YVTN repeat-like-containing domain VF_1568 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VF_1568 IPR002942 RNA-binding S4 domain VF_1568 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VF_1568 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VF_1568 IPR020103 Pseudouridine synthase, catalytic domain VF_1570 IPR001789 Signal transduction response regulator, receiver domain VF_1570 IPR001867 Signal transduction response regulator, C-terminal VF_1570 IPR011006 CheY-like superfamily VF_1570 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1571 IPR020945 DMSO/Nitrate reductase chaperone VF_1571 IPR023069 Chaperone TorD VF_1572 IPR000843 Transcription regulator HTH, LacI VF_1572 IPR010982 Lambda repressor-like, DNA-binding domain VF_1572 IPR023588 Transcription regulator HTH, PurR VF_1572 IPR028082 Periplasmic binding protein-like I VF_1573 IPR007076 TfoX, N-terminal VF_1573 IPR007077 TfoX, C-terminal VF_1573 IPR026256 Transcriptional regulator, TfoX/Sxy-type VF_1575 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1575 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding VF_1577 IPR003703 Acyl-CoA thioesterase VF_1577 IPR029069 HotDog domain VF_1578 IPR000485 AsnC-type HTH domain VF_1578 IPR011008 Dimeric alpha-beta barrel VF_1578 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1578 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VF_1578 IPR019887 Transcription regulator AsnC-type, C-terminal VF_1578 IPR019888 Transcription regulator AsnC-type VF_1579 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VF_1580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1580 IPR018317 Queuosine biosynthesis protein QueC VF_1581 IPR001036 Acriflavin resistance protein VF_1581 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VF_1582 IPR006143 RND efflux pump, membrane fusion protein VF_1582 IPR032317 VF_1582 VF_1583 IPR004808 AP endonuclease 1 VF_1583 IPR005135 Endonuclease/exonuclease/phosphatase VF_1583 IPR020847 AP endonuclease 1, binding site VF_1584 IPR004045 Glutathione S-transferase, N-terminal VF_1584 IPR007494 Glutaredoxin 2, C-terminal VF_1584 IPR010987 Glutathione S-transferase, C-terminal-like VF_1584 IPR011767 Glutaredoxin active site VF_1584 IPR011901 Glutaredoxin, GrxB VF_1584 IPR012336 Thioredoxin-like fold VF_1585 IPR000515 MetI-like domain VF_1585 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VF_1586 IPR000515 MetI-like domain VF_1586 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family VF_1587 IPR001320 Ionotropic glutamate receptor VF_1587 IPR001638 Extracellular solute-binding protein, family 3 VF_1587 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein VF_1587 IPR018313 Extracellular solute-binding protein, family 3, conserved site VF_1588 IPR003439 ABC transporter-like VF_1588 IPR003593 AAA+ ATPase domain VF_1588 IPR017871 ABC transporter, conserved site VF_1588 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1588 IPR030679 VF_1588 VF_1589 IPR021794 Protein of unknown function DUF3360 VF_1590 IPR001150 Glycine radical domain VF_1590 IPR004184 Pyruvate formate lyase domain VF_1590 IPR005949 Formate acetyltransferase VF_1590 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VF_1591 IPR001989 Radical-activating enzyme, conserved site VF_1591 IPR007197 Radical SAM VF_1591 IPR012838 Pyruvate formate-lyase activating enzyme VF_1592 IPR003347 JmjC domain VF_1593 IPR003439 ABC transporter-like VF_1593 IPR003593 AAA+ ATPase domain VF_1593 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VF_1593 IPR017871 ABC transporter, conserved site VF_1593 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1594 IPR003439 ABC transporter-like VF_1594 IPR003593 AAA+ ATPase domain VF_1594 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VF_1594 IPR017871 ABC transporter, conserved site VF_1594 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1595 IPR000515 MetI-like domain VF_1595 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VF_1596 IPR000515 MetI-like domain VF_1597 IPR000914 Bacterial extracellular solute-binding protein, family 5 VF_1597 IPR030678 VF_1597 VF_1598 IPR000601 PKD domain VF_1598 IPR001223 Glycoside hydrolase, family 18, catalytic domain VF_1598 IPR001579 Glycoside hydrolase, chitinase active site VF_1598 IPR003610 Carbohydrate-binding module family 5/12 VF_1598 IPR011583 Chitinase II VF_1598 IPR013540 Chitinase A N-terminal VF_1598 IPR013781 Glycoside hydrolase, catalytic domain VF_1598 IPR013783 Immunoglobulin-like fold VF_1598 IPR014756 Immunoglobulin E-set VF_1598 IPR017853 Glycoside hydrolase, superfamily VF_1598 IPR022409 PKD/Chitinase domain VF_1598 IPR029070 Chitinase insertion domain VF_1599 IPR001267 Thymidine kinase VF_1599 IPR020633 Thymidine kinase, conserved site VF_1599 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1600 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VF_1600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1600 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR VF_1600 IPR015803 Cysteine-tRNA ligase VF_1600 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase VF_1600 IPR032678 VF_1600 VF_1601 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain VF_1601 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site VF_1601 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase VF_1601 IPR029000 Cyclophilin-like domain VF_1602 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VF_1602 IPR010138 UDP-2,3-diacylglucosamine hydrolase VF_1602 IPR029052 Metallo-dependent phosphatase-like VF_1603 IPR001633 EAL domain VF_1603 IPR013976 Metal-dependent hydrolase HDOD VF_1603 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VF_1604 IPR023006 Uncharacterised protein family UPF0225 VF_1604 IPR032710 VF_1604 VF_1605 IPR000175 Sodium:neurotransmitter symporter VF_1606 IPR001736 Phospholipase D/Transphosphatidylase VF_1606 IPR022924 Cardiolipin synthase VF_1606 IPR025202 Phospholipase D-like domain VF_1606 IPR027379 Cardiolipin synthase N-terminal VF_1606 IPR030840 VF_1606 VF_1607 IPR001474 GTP cyclohydrolase I VF_1607 IPR018234 GTP cyclohydrolase I, conserved site VF_1607 IPR020602 GTP cyclohydrolase I domain VF_1608 IPR001453 Molybdopterin binding domain VF_1608 IPR005110 MoeA, N-terminal and linker domain VF_1608 IPR005111 MoeA, C-terminal, domain IV VF_1608 IPR008284 Molybdenum cofactor biosynthesis, conserved site VF_1609 IPR000594 UBA/THIF-type NAD/FAD binding fold VF_1609 IPR012730 Molybdopterin synthase sulfurylase MoeB VF_1609 IPR016040 NAD(P)-binding domain VF_1610 IPR011862 Phosphate binding protein VF_1610 IPR024370 PBP domain VF_1611 IPR000515 MetI-like domain VF_1611 IPR011864 Phosphate ABC transporter, permease protein PstC VF_1612 IPR000515 MetI-like domain VF_1612 IPR005672 Phosphate transport system permease protein PstA VF_1613 IPR003439 ABC transporter-like VF_1613 IPR003593 AAA+ ATPase domain VF_1613 IPR005670 Phosphate transport system permease protein 1 VF_1613 IPR017871 ABC transporter, conserved site VF_1613 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1615 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VF_1615 IPR027385 Outer membrane protein beta-barrel VF_1616 IPR018635 Uncharacterised protein family UPF0319 VF_1617 IPR012902 Prokaryotic N-terminal methylation site VF_1618 IPR003660 HAMP linker domain VF_1618 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1619 IPR001789 Signal transduction response regulator, receiver domain VF_1619 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1619 IPR003660 HAMP linker domain VF_1619 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_1619 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_1619 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VF_1619 IPR011006 CheY-like superfamily VF_1619 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS VF_1620 IPR001761 Periplasmic binding protein/LacI sugar binding domain VF_1620 IPR014301 TMAO reductase system periplasmic, TorT VF_1620 IPR028082 Periplasmic binding protein-like I VF_1621 IPR004363 Methylglyoxal synthase VF_1621 IPR011607 Methylglyoxal synthase-like domain VF_1621 IPR018148 Methylglyoxal synthase, active site VF_1622 IPR000212 DNA helicase, UvrD/REP type VF_1622 IPR014016 UvrD-like Helicase, ATP-binding domain VF_1622 IPR014017 DNA helicase, UvrD-like, C-terminal VF_1622 IPR022161 DNA helicase IV, N-terminal domain VF_1622 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1623 IPR010019 Integral membrane protein, YccS VF_1623 IPR010020 Integral membrane protein, YccS/YhfK VF_1623 IPR032692 VF_1623 VF_1624 IPR016867 Glycine cleavage repressor GcvR VF_1625 IPR000462 CDP-alcohol phosphatidyltransferase VF_1625 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase VF_1626 IPR000305 GIY-YIG nuclease superfamily VF_1626 IPR001162 UvrC family homology region VF_1626 IPR001943 UVR domain VF_1626 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VF_1626 IPR004791 UvrABC system, subunit C VF_1626 IPR010994 RuvA domain 2-like VF_1626 IPR027299 GIY-YIG domain VF_1627 IPR000792 Transcription regulator LuxR, C-terminal VF_1627 IPR001789 Signal transduction response regulator, receiver domain VF_1627 IPR011006 CheY-like superfamily VF_1627 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1627 IPR016032 Signal transduction response regulator, C-terminal effector VF_1628 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain VF_1628 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain VF_1628 IPR006172 DNA-directed DNA polymerase, family B VF_1628 IPR012337 Ribonuclease H-like domain VF_1628 IPR017964 DNA-directed DNA polymerase, family B, conserved site VF_1628 IPR023211 DNA polymerase, palm domain VF_1630 IPR018461 Na+/H+ antiporter, NhaC-like VF_1631 IPR001801 Histone-like protein H-NS VF_1631 IPR027444 Histone-like protein H-NS, C-terminal domain VF_1631 IPR027454 Histone-like protein H-NS family, oligomerisation domain VF_1632 IPR010583 MltA-interacting MipA VF_1633 IPR000524 Transcription regulator HTH, GntR VF_1633 IPR008920 Transcription regulator FadR/GntR, C-terminal VF_1633 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1633 IPR014178 Fatty acid response transcription factor FadR VF_1633 IPR028374 FadR, C-terminal domain VF_1634 IPR004671 Na+/H+ antiporter NhaB VF_1635 IPR003752 Disulphide bond formation protein DsbB/BdbC VF_1635 IPR022920 Disulphide bond formation protein DsbB VF_1635 IPR023380 Disulphide bond formation protein DsbB-like domain VF_1636 IPR004027 SEC-C motif VF_1636 IPR011978 Uncharacterised protein family UPF0149 VF_1636 IPR032710 VF_1636 VF_1637 IPR012902 Prokaryotic N-terminal methylation site VF_1638 IPR001269 tRNA-dihydrouridine synthase VF_1638 IPR013785 Aldolase-type TIM barrel VF_1638 IPR018517 tRNA-dihydrouridine synthase, conserved site VF_1638 IPR032886 VF_1638 VF_1639 IPR000160 GGDEF domain VF_1639 IPR029151 Periplasmic sensor domain-like VF_1639 IPR029787 Nucleotide cyclase VF_1641 IPR000380 DNA topoisomerase, type IA VF_1641 IPR003601 DNA topoisomerase, type IA, domain 2 VF_1641 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VF_1641 IPR005738 DNA topoisomerase III VF_1641 IPR006171 Toprim domain VF_1641 IPR013497 DNA topoisomerase, type IA, central VF_1641 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VF_1641 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VF_1641 IPR023405 DNA topoisomerase, type IA, core domain VF_1641 IPR023406 DNA topoisomerase, type IA, active site VF_1642 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal VF_1642 IPR013785 Aldolase-type TIM barrel VF_1642 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_1643 IPR002142 Peptidase S49 VF_1643 IPR004634 Peptidase S49, protease IV VF_1643 IPR004635 Peptidase S49, SppA VF_1643 IPR029045 ClpP/crotonase-like domain VF_1644 IPR006033 L-asparaginase, type I VF_1644 IPR006034 Asparaginase/glutaminase VF_1644 IPR020827 Asparaginase/glutaminase, active site 1 VF_1644 IPR027473 L-asparaginase, C-terminal domain VF_1644 IPR027474 L-asparaginase, N-terminal VF_1644 IPR027475 Asparaginase/glutaminase, active site 2 VF_1645 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VF_1645 IPR000534 Semialdehyde dehydrogenase, NAD-binding VF_1645 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type VF_1645 IPR012080 Aspartate-semialdehyde dehydrogenase VF_1645 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VF_1645 IPR016040 NAD(P)-binding domain VF_1646 IPR004770 Na+/H+ antiporter NhaC VF_1646 IPR018461 Na+/H+ antiporter, NhaC-like VF_1648 IPR007358 Nucleoid-associated protein NdpA VF_1649 IPR009857 Uncharacterised protein family UPF0352 VF_1649 IPR023202 YejL-like domain VF_1650 IPR000917 Sulfatase VF_1650 IPR012159 Membrane sulfatase, HI0842-related VF_1650 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha VF_1650 IPR017850 Alkaline-phosphatase-like, core domain VF_1650 IPR024588 Membrane sulfatase, HI0842-related, N-terminal domain VF_1651 IPR001148 Alpha carbonic anhydrase VF_1651 IPR018338 Carbonic anhydrase, alpha-class, conserved site VF_1651 IPR023561 Carbonic anhydrase, alpha-class VF_1652 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1652 IPR004090 Chemotaxis methyl-accepting receptor VF_1652 IPR029151 Periplasmic sensor domain-like VF_1652 IPR033479 VF_1652 VF_1653 IPR000845 Nucleoside phosphorylase domain VF_1653 IPR018017 Nucleoside phosphorylase VF_1654 IPR000182 GNAT domain VF_1654 IPR016181 Acyl-CoA N-acyltransferase VF_1655 IPR003593 AAA+ ATPase domain VF_1655 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1656 IPR006685 Mechanosensitive ion channel MscS VF_1656 IPR010920 Like-Sm (LSM) domain VF_1656 IPR011066 Mechanosensitive ion channel MscS, C-terminal VF_1657 IPR005123 Oxoglutarate/iron-dependent dioxygenase VF_1657 IPR026992 Non-haem dioxygenase N-terminal domain VF_1657 IPR027443 Isopenicillin N synthase-like VF_1658 IPR002347 Glucose/ribitol dehydrogenase VF_1658 IPR016040 NAD(P)-binding domain VF_1660 IPR005358 Putative zinc- or iron-chelating domain containing protein VF_1660 IPR008228 Uncharacterised conserved protein UCP006173 VF_1661 IPR005358 Putative zinc- or iron-chelating domain containing protein VF_1662 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1662 IPR013468 Conserved hypothetical protein CHP02647 VF_1662 IPR020948 Phosphate-starvation-induced PsiE-like VF_1663 IPR007379 Tim44-like domain VF_1663 IPR032710 VF_1663 VF_1664 IPR009057 Homeodomain-like VF_1664 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VF_1664 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_1664 IPR025996 WHG domain VF_1665 IPR002123 Phospholipid/glycerol acyltransferase VF_1665 IPR011701 Major facilitator superfamily VF_1665 IPR020846 Major facilitator superfamily domain VF_1666 IPR000873 AMP-dependent synthetase/ligase VF_1666 IPR010192 2-succinylbenzoate--CoA ligase VF_1666 IPR020845 AMP-binding, conserved site VF_1666 IPR025110 AMP-binding enzyme C-terminal domain VF_1667 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase VF_1667 IPR010196 O-succinylbenzoic acid (OSB) synthetase VF_1667 IPR010197 O-succinylbenzoate synthase, low GC Gram-positive bacteria-type VF_1667 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VF_1667 IPR029017 Enolase N-terminal domain-like VF_1667 IPR029065 Enolase C-terminal domain-like VF_1669 IPR001753 Crotonase superfamily VF_1669 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase VF_1669 IPR014748 Crontonase, C-terminal VF_1669 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VF_1669 IPR029045 ClpP/crotonase-like domain VF_1670 IPR000073 Alpha/beta hydrolase fold-1 VF_1670 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase VF_1670 IPR029058 Alpha/Beta hydrolase fold VF_1671 IPR004433 Menaquinone biosynthesis protein MenD VF_1671 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VF_1671 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VF_1671 IPR029035 DHS-like NAD/FAD-binding domain VF_1671 IPR029061 Thiamin diphosphate-binding fold VF_1671 IPR032264 VF_1671 VF_1672 IPR004561 Isochorismate synthase VF_1672 IPR005801 ADC synthase VF_1672 IPR015890 Chorismate binding, C-terminal VF_1673 IPR004839 Aminotransferase, class I/classII VF_1673 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_1673 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_1673 IPR015424 Pyridoxal phosphate-dependent transferase VF_1674 IPR000914 Bacterial extracellular solute-binding protein, family 5 VF_1674 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VF_1675 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal VF_1675 IPR024072 Dihydrofolate reductase-like domain VF_1676 IPR001647 DNA-binding HTH domain, TetR-type VF_1676 IPR009057 Homeodomain-like VF_1676 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VF_1676 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_1677 IPR009057 Homeodomain-like VF_1677 IPR009594 Transcription regulator HTH, AraC, N-terminal VF_1677 IPR018060 DNA binding HTH domain, AraC-type VF_1677 IPR018062 HTH domain AraC-type, conserved site VF_1678 IPR001670 Alcohol dehydrogenase, iron-type VF_1680 IPR000620 Drug/metabolite transporter VF_1681 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent VF_1681 IPR015590 Aldehyde dehydrogenase domain VF_1681 IPR016161 Aldehyde/histidinol dehydrogenase VF_1681 IPR016162 Aldehyde dehydrogenase, N-terminal VF_1681 IPR016163 Aldehyde dehydrogenase, C-terminal VF_1681 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VF_1682 IPR003607 HD/PDEase domain VF_1682 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase VF_1682 IPR006674 HD domain VF_1682 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 VF_1682 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain VF_1682 IPR026875 Phosphohydrolase-associated domain VF_1682 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain VF_1683 IPR005636 DTW VF_1684 IPR002610 Peptidase S54, rhomboid VF_1684 IPR022764 Peptidase S54, rhomboid domain VF_1684 IPR023826 Rhomboid-like serine protease, proteobacteria VF_1685 IPR000093 DNA recombination protein RecR VF_1685 IPR006171 Toprim domain VF_1685 IPR015967 Recombination protein RecR, conserved site VF_1685 IPR023627 Recombination protein RecR VF_1685 IPR023628 Recombination protein RecR, C4-type zinc finger VF_1686 IPR004401 Nucleoid-associated protein YbaB VF_1687 IPR003593 AAA+ ATPase domain VF_1687 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VF_1687 IPR012763 DNA polymerase III, subunit gamma/ tau VF_1687 IPR021029 DNA polymerase III, tau subunit, domain V VF_1687 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV VF_1687 IPR022754 DNA polymerase III, gamma subunit, domain III VF_1687 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1688 IPR000836 Phosphoribosyltransferase domain VF_1688 IPR005764 Adenine phosphoribosyl transferase VF_1688 IPR029057 Phosphoribosyltransferase-like VF_1689 IPR001789 Signal transduction response regulator, receiver domain VF_1689 IPR011006 CheY-like superfamily VF_1690 IPR000847 Transcription regulator HTH, LysR VF_1690 IPR005119 LysR, substrate-binding VF_1690 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1691 IPR005854 Amidophosphoribosyl transferase VF_1691 IPR029055 Nucleophile aminohydrolases, N-terminal VF_1691 IPR029057 Phosphoribosyltransferase-like VF_1692 IPR003825 Colicin V production, CvpA VF_1693 IPR007730 Sporulation-related domain VF_1694 IPR001645 Folylpolyglutamate synthetase VF_1694 IPR004101 Mur ligase, C-terminal VF_1694 IPR013221 Mur ligase, central VF_1694 IPR018109 Folylpolyglutamate synthetase, conserved site VF_1695 IPR000022 Carboxyl transferase VF_1695 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit VF_1695 IPR029045 ClpP/crotonase-like domain VF_1696 IPR001406 Pseudouridine synthase I, TruA VF_1696 IPR020094 Pseudouridine synthase I, TruA, N-terminal VF_1696 IPR020095 Pseudouridine synthase I, TruA, C-terminal VF_1696 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain VF_1696 IPR020103 Pseudouridine synthase, catalytic domain VF_1697 IPR020011 Motility protein FimV, C-terminal VF_1697 IPR020012 Motility protein FimV, N-terminal VF_1698 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site VF_1698 IPR000534 Semialdehyde dehydrogenase, NAD-binding VF_1698 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type VF_1698 IPR012080 Aspartate-semialdehyde dehydrogenase VF_1698 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VF_1698 IPR016040 NAD(P)-binding domain VF_1699 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VF_1699 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VF_1699 IPR016040 NAD(P)-binding domain VF_1699 IPR020921 Erythronate-4-phosphate dehydrogenase VF_1699 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain VF_1699 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VF_1700 IPR014030 Beta-ketoacyl synthase, N-terminal VF_1700 IPR014031 Beta-ketoacyl synthase, C-terminal VF_1700 IPR016039 Thiolase-like VF_1700 IPR018201 Beta-ketoacyl synthase, active site VF_1700 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VF_1701 IPR006076 FAD dependent oxidoreductase VF_1701 IPR008471 MnmC-like methyltransferase VF_1701 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal VF_1701 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC VF_1701 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_1701 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1702 IPR011757 Lytic transglycosylase MltB VF_1702 IPR011970 Lytic murein transglycosylase VF_1702 IPR023346 Lysozyme-like domain VF_1702 IPR031304 VF_1702 VF_1703 IPR027354 YcgL domain VF_1704 IPR005526 Septum formation inhibitor MinC, C-terminal VF_1704 IPR007874 Septum formation inhibitor MinC, N-terminal VF_1704 IPR013033 Septum formation inhibitor MinC VF_1704 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal VF_1705 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VF_1705 IPR010223 ATP binding protein MinD, bacterial-type VF_1705 IPR025501 ATP binding protein MinD VF_1705 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1706 IPR005527 Septum formation topological specificity factor MinE VF_1707 IPR002121 HRDC domain VF_1707 IPR002562 3'-5' exonuclease domain VF_1707 IPR006292 Ribonuclease D VF_1707 IPR010997 HRDC-like VF_1707 IPR012337 Ribonuclease H-like domain VF_1708 IPR000873 AMP-dependent synthetase/ligase VF_1708 IPR020845 AMP-binding, conserved site VF_1708 IPR025110 AMP-binding enzyme C-terminal domain VF_1709 IPR000073 Alpha/beta hydrolase fold-1 VF_1709 IPR029058 Alpha/Beta hydrolase fold VF_1710 IPR004658 Outer membrane lipoprotein Slp VF_1712 IPR000905 Gcp-like domain VF_1712 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ VF_1713 IPR006555 ATP-dependent helicase, C-terminal VF_1713 IPR011545 DEAD/DEAH box helicase domain VF_1713 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_1713 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1714 IPR002376 Formyl transferase, N-terminal VF_1714 IPR004810 Formyltetrahydrofolate deformylase VF_1715 IPR000073 Alpha/beta hydrolase fold-1 VF_1715 IPR000639 Epoxide hydrolase-like VF_1715 IPR029058 Alpha/Beta hydrolase fold VF_1716 IPR009057 Homeodomain-like VF_1716 IPR011051 RmlC-like cupin domain VF_1716 IPR014710 RmlC-like jelly roll fold VF_1716 IPR018060 DNA binding HTH domain, AraC-type VF_1716 IPR018062 HTH domain AraC-type, conserved site VF_1716 IPR020449 Transcription regulator HTH, AraC- type VF_1717 IPR000620 Drug/metabolite transporter VF_1718 IPR004839 Aminotransferase, class I/classII VF_1718 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_1718 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_1718 IPR015424 Pyridoxal phosphate-dependent transferase VF_1718 IPR027619 Putative C-S lyase VF_1719 IPR001996 Phosphotransferase system, IIB component, type 1 VF_1719 IPR003352 Phosphotransferase system, EIIC VF_1719 IPR011301 PTS system, maltose/glucose-specific IIBC component VF_1719 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VF_1720 IPR000843 Transcription regulator HTH, LacI VF_1720 IPR001761 Periplasmic binding protein/LacI sugar binding domain VF_1720 IPR010982 Lambda repressor-like, DNA-binding domain VF_1720 IPR028082 Periplasmic binding protein-like I VF_1721 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal VF_1721 IPR006276 Cobalamin-independent methionine synthase VF_1721 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal VF_1722 IPR000847 Transcription regulator HTH, LysR VF_1722 IPR005119 LysR, substrate-binding VF_1722 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1724 IPR004669 C4-dicarboxylate anaerobic carrier VF_1724 IPR018385 C4-dicarboxylate anaerobic carrier-like VF_1725 IPR000073 Alpha/beta hydrolase fold-1 VF_1725 IPR029058 Alpha/Beta hydrolase fold VF_1726 IPR006638 Elongator protein 3/MiaB/NifB VF_1726 IPR007197 Radical SAM VF_1726 IPR013704 Uncharacterised protein family UPF0313, N-terminal VF_1726 IPR020612 Methylthiotransferase, conserved site VF_1726 IPR022946 Uncharacterised protein family UPF0313 VF_1726 IPR023404 Radical SAM, alpha/beta horseshoe VF_1726 IPR024560 Uncharacterised protein family UPF0313, C-terminal VF_1727 IPR002305 Aminoacyl-tRNA synthetase, class Ic VF_1727 IPR002307 Tyrosine-tRNA ligase VF_1727 IPR002942 RNA-binding S4 domain VF_1727 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1727 IPR024088 Tyrosine-tRNA ligase, bacterial-type VF_1727 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 VF_1729 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VF_1729 IPR027385 Outer membrane protein beta-barrel VF_1730 IPR000175 Sodium:neurotransmitter symporter VF_1731 IPR004045 Glutathione S-transferase, N-terminal VF_1731 IPR010987 Glutathione S-transferase, C-terminal-like VF_1731 IPR012336 Thioredoxin-like fold VF_1732 IPR001996 Phosphotransferase system, IIB component, type 1 VF_1732 IPR003352 Phosphotransferase system, EIIC VF_1732 IPR011299 PTS system glucose-specific IIBC component VF_1732 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site VF_1733 IPR001130 TatD family VF_1733 IPR015991 Uncharacterised deoxyribonuclease TatD-type VF_1733 IPR018228 Deoxyribonuclease, TatD-related, conserved site VF_1733 IPR032466 VF_1733 VF_1734 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal VF_1734 IPR015199 DNA polymerase III, delta subunit, C-terminal VF_1734 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1735 IPR018094 Thymidylate kinase VF_1735 IPR018095 Thymidylate kinase, conserved site VF_1735 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1736 IPR003770 Uncharacterised protein family UPF0755, YceG-like VF_1736 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain VF_1737 IPR001544 Aminotransferase, class IV VF_1737 IPR017824 Aminodeoxychorismate lyase, class IV VF_1737 IPR018300 Aminotransferase, class IV, conserved site VF_1738 IPR014030 Beta-ketoacyl synthase, N-terminal VF_1738 IPR014031 Beta-ketoacyl synthase, C-terminal VF_1738 IPR016039 Thiolase-like VF_1738 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 VF_1738 IPR018201 Beta-ketoacyl synthase, active site VF_1738 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VF_1739 IPR003231 Acyl carrier protein (ACP) VF_1739 IPR006162 Phosphopantetheine attachment site VF_1739 IPR009081 Acyl carrier protein-like VF_1740 IPR002347 Glucose/ribitol dehydrogenase VF_1740 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase VF_1740 IPR016040 NAD(P)-binding domain VF_1740 IPR020904 Short-chain dehydrogenase/reductase, conserved site VF_1741 IPR001227 Acyl transferase domain VF_1741 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type VF_1741 IPR014043 Acyl transferase VF_1741 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VF_1741 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VF_1741 IPR020801 Polyketide synthase, acyl transferase domain VF_1741 IPR024925 Malonyl CoA-acyl carrier protein transacylase VF_1742 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 VF_1742 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal VF_1742 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VF_1742 IPR016039 Thiolase-like VF_1743 IPR003664 Fatty acid synthesis PlsX protein VF_1743 IPR012281 Phospholipid biosynthesis protein, PlsX-like VF_1743 IPR024084 Isopropylmalate dehydrogenase-like domain VF_1744 IPR002677 Ribosomal protein L32p VF_1744 IPR011332 Zinc-binding ribosomal protein VF_1745 IPR003772 Protein of unknown function DUF177 VF_1746 IPR003697 Maf-like protein VF_1746 IPR029001 Inosine triphosphate pyrophosphatase-like VF_1747 IPR002942 RNA-binding S4 domain VF_1747 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VF_1747 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site VF_1747 IPR006225 Pseudouridine synthase, RluC/RluD VF_1747 IPR020103 Pseudouridine synthase, catalytic domain VF_1748 IPR003029 Ribosomal protein S1, RNA-binding domain VF_1748 IPR004659 Ribonuclease E/G VF_1748 IPR012340 Nucleic acid-binding, OB-fold VF_1748 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VF_1748 IPR022967 RNA-binding domain, S1 VF_1748 IPR028878 Ribonuclease E VF_1749 IPR001902 Sulphate anion transporter VF_1749 IPR002645 STAS domain VF_1749 IPR011547 Sulphate transporter VF_1750 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR VF_1750 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1751 IPR007844 AsmA VF_1752 IPR000764 Uridine kinase like VF_1752 IPR006083 Phosphoribulokinase/uridine kinase VF_1752 IPR026008 Uridine kinase VF_1752 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1753 IPR000808 Mrp, conserved site VF_1753 IPR019591 Mrp/NBP35 ATP-binding protein VF_1753 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1754 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VF_1754 IPR002547 tRNA-binding domain VF_1754 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal VF_1754 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding VF_1754 IPR012340 Nucleic acid-binding, OB-fold VF_1754 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1754 IPR014758 Methionyl-tRNA synthetase VF_1754 IPR015413 Methionyl/Leucyl tRNA synthetase VF_1754 IPR023458 Methionine-tRNA ligase, type 1 VF_1754 IPR029038 Methionyl-tRNA synthetase, Zn-domain VF_1755 IPR001754 Orotidine 5'-phosphate decarboxylase domain VF_1755 IPR011060 Ribulose-phosphate binding barrel VF_1755 IPR013785 Aldolase-type TIM barrel VF_1755 IPR014732 Orotidine 5'-phosphate decarboxylase VF_1755 IPR018089 Orotidine 5'-phosphate decarboxylase, active site VF_1756 IPR011990 Tetratricopeptide-like helical domain VF_1756 IPR019734 Tetratricopeptide repeat VF_1756 IPR030865 VF_1756 VF_1757 IPR010445 Protein of unknown function DUF1049 VF_1757 IPR032906 VF_1757 VF_1758 IPR000119 Histone-like bacterial DNA-binding protein VF_1758 IPR005685 Integration host factor, beta subunit VF_1758 IPR010992 Integration host factor (IHF)-like DNA-binding domain VF_1758 IPR020816 Histone-like DNA-binding protein, conserved site VF_1759 IPR000110 Ribosomal protein S1 VF_1759 IPR003029 Ribosomal protein S1, RNA-binding domain VF_1759 IPR012340 Nucleic acid-binding, OB-fold VF_1759 IPR022967 RNA-binding domain, S1 VF_1760 IPR003136 Cytidylate kinase VF_1760 IPR011994 Cytidylate kinase domain VF_1760 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1761 IPR001986 Enolpyruvate transferase domain VF_1761 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase VF_1761 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VF_1761 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site VF_1762 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase VF_1762 IPR016181 Acyl-CoA N-acyltransferase VF_1763 IPR007471 Arginine-tRNA-protein transferase, N-terminal VF_1763 IPR007472 Arginine-tRNA-protein transferase, C-terminal VF_1763 IPR016181 Acyl-CoA N-acyltransferase VF_1763 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic VF_1763 IPR030700 VF_1763 VF_1764 IPR004368 Translation initiation factor IF-1 VF_1764 IPR006196 RNA-binding domain, S1, IF1 type VF_1764 IPR012340 Nucleic acid-binding, OB-fold VF_1764 IPR022967 RNA-binding domain, S1 VF_1765 IPR001270 ClpA/B family VF_1765 IPR003593 AAA+ ATPase domain VF_1765 IPR003959 ATPase, AAA-type, core VF_1765 IPR004176 Clp, N-terminal VF_1765 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA VF_1765 IPR018368 ClpA/B, conserved site 1 VF_1765 IPR019489 Clp ATPase, C-terminal VF_1765 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1765 IPR028299 ClpA/B, conserved site 2 VF_1766 IPR003769 Adaptor protein ClpS, core VF_1766 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VF_1766 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VF_1767 IPR002059 Cold-shock protein, DNA-binding VF_1767 IPR011129 Cold shock protein VF_1767 IPR012156 Cold shock, CspA VF_1767 IPR012340 Nucleic acid-binding, OB-fold VF_1767 IPR012751 CspD, cold shock VF_1767 IPR019844 Cold-shock conserved site VF_1768 IPR025411 Domain of unknown function DUF4136 VF_1769 IPR003846 Uncharacterised protein family UPF0061 VF_1770 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase VF_1770 IPR016040 NAD(P)-binding domain VF_1770 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VF_1770 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VF_1770 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site VF_1771 IPR010650 PrkA C-terminal domain VF_1771 IPR013153 PrkA AAA domain VF_1771 IPR016230 Serine-protein kinase, PrkA VF_1771 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1773 IPR002035 von Willebrand factor, type A VF_1773 IPR006698 Thermus phage phiYS40, Orf56 VF_1774 IPR007390 Sporulation stage V, protein R VF_1775 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric VF_1775 IPR024084 Isopropylmalate dehydrogenase-like domain VF_1776 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F VF_1776 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F VF_1776 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site VF_1776 IPR020103 Pseudouridine synthase, catalytic domain VF_1778 IPR003660 HAMP linker domain VF_1778 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1779 IPR014510 Tellurite resistance predicted, YeaR VF_1779 IPR014710 RmlC-like jelly roll fold VF_1779 IPR015392 Domain of unknown function DUF1971 VF_1780 IPR001433 Oxidoreductase FAD/NAD(P)-binding VF_1780 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VF_1780 IPR017938 Riboflavin synthase-like beta-barrel VF_1781 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_1781 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase VF_1782 IPR001279 Beta-lactamase-like VF_1782 IPR004039 Rubredoxin-type fold VF_1782 IPR008254 Flavodoxin/nitric oxide synthase VF_1782 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin VF_1782 IPR024935 Rubredoxin domain VF_1782 IPR029039 Flavoprotein-like VF_1783 IPR002078 RNA polymerase sigma factor 54 interaction domain VF_1783 IPR003018 GAF domain VF_1783 IPR003593 AAA+ ATPase domain VF_1783 IPR009057 Homeodomain-like VF_1783 IPR023944 Anaerobic nitric oxide reductase transcription regulator VF_1783 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VF_1783 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VF_1783 IPR025944 Sigma-54 interaction domain, conserved site VF_1783 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1783 IPR029016 GAF domain-like VF_1784 IPR004506 tRNA-specific 2-thiouridylase VF_1784 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1784 IPR023382 Adenine nucleotide alpha hydrolase-like domains VF_1785 IPR007451 Uncharacterised protein family UPF0274 VF_1786 IPR000362 Fumarate lyase family VF_1786 IPR004769 Adenylosuccinate lyase VF_1786 IPR008948 L-Aspartase-like VF_1786 IPR013539 Adenylosuccinate lyase PurB, C-terminal VF_1786 IPR020557 Fumarate lyase, conserved site VF_1786 IPR022761 Fumarate lyase, N-terminal VF_1786 IPR024083 Fumarase/histidase, N-terminal VF_1787 IPR003313 AraC-type arabinose-binding/dimerisation domain VF_1787 IPR009057 Homeodomain-like VF_1787 IPR018060 DNA binding HTH domain, AraC-type VF_1787 IPR018062 HTH domain AraC-type, conserved site VF_1789 IPR003660 HAMP linker domain VF_1789 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_1790 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site VF_1790 IPR001650 Helicase, C-terminal VF_1790 IPR011545 DEAD/DEAH box helicase domain VF_1790 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_1790 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1791 IPR002641 Patatin/Phospholipase A2-related VF_1791 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VF_1792 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VF_1792 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VF_1793 IPR000559 Formate-tetrahydrofolate ligase, FTHFS VF_1793 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site VF_1793 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1794 IPR005587 Uncharacterised protein family UPF0304, YfbU VF_1794 IPR023145 YfbU, helix-hairpin domain VF_1794 IPR023146 YfbU, alpha-helical bundle domain VF_1795 IPR001897 Porin, gammaproteobacterial VF_1795 IPR023614 Porin domain VF_1796 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted VF_1796 IPR025714 Methyltransferase domain VF_1796 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1797 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VF_1797 IPR027385 Outer membrane protein beta-barrel VF_1798 IPR001807 Chloride channel, voltage gated VF_1798 IPR014743 Chloride channel, core VF_1799 IPR004960 Bacterial lipid A biosynthesis acyltransferase VF_1799 IPR011921 Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase VF_1800 IPR001310 Histidine triad (HIT) protein VF_1800 IPR011146 HIT-like domain VF_1800 IPR026026 Histidine triad hydrolase, Hint-type VF_1801 IPR014987 Uncharacterised protein family YfcL VF_1802 IPR007411 Protein of unknown function DUF462 VF_1803 IPR003416 MgtC/SapB/SrpB transporter VF_1804 IPR005115 Uncharacterised domain UPF0126 VF_1805 IPR000453 Chorismate synthase VF_1805 IPR020541 Chorismate synthase, conserved site VF_1806 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VF_1806 IPR004556 Modification methylase HemK VF_1806 IPR007848 Methyltransferase small domain VF_1806 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase VF_1806 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1807 IPR002625 Smr protein/MutS2 C-terminal VF_1807 IPR022990 Uncharacterised protein family UPF0115 VF_1808 IPR004449 Phosphohistidine phosphatase SixA, subgroup VF_1808 IPR013078 Histidine phosphatase superfamily, clade-1 VF_1808 IPR029033 Histidine phosphatase superfamily VF_1809 IPR001431 Peptidase M16, zinc-binding site VF_1809 IPR007863 Peptidase M16, C-terminal domain VF_1809 IPR011237 Peptidase M16 domain VF_1809 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VF_1809 IPR011765 Peptidase M16, N-terminal VF_1809 IPR032632 VF_1809 VF_1810 IPR001753 Crotonase superfamily VF_1810 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal VF_1810 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VF_1810 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site VF_1810 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VF_1810 IPR012802 Fatty oxidation complex, alpha subunit FadJ VF_1810 IPR013328 Dehydrogenase, multihelical VF_1810 IPR016040 NAD(P)-binding domain VF_1810 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site VF_1810 IPR029045 ClpP/crotonase-like domain VF_1811 IPR002155 Thiolase VF_1811 IPR012806 Acetyl-CoA C-acyltransferase FadI VF_1811 IPR016039 Thiolase-like VF_1811 IPR020613 Thiolase, conserved site VF_1811 IPR020616 Thiolase, N-terminal VF_1811 IPR020617 Thiolase, C-terminal VF_1812 IPR005017 Membrane protein, aromatic hydrocarbon degradation VF_1813 IPR005017 Membrane protein, aromatic hydrocarbon degradation VF_1814 IPR014509 Uncharacterised conserved protein UCP020606 VF_1815 IPR007428 VacJ-like lipoprotein VF_1816 IPR011990 Tetratricopeptide-like helical domain VF_1816 IPR017560 Cytochrome c-type biogenesis protein CcmI VF_1817 IPR005616 Cytochrome C biogenesis protein CcmH VF_1818 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE VF_1818 IPR012336 Thioredoxin-like fold VF_1818 IPR013740 Redoxin VF_1818 IPR017937 Thioredoxin, conserved site VF_1819 IPR002541 Cytochrome c assembly protein VF_1819 IPR003567 Cytochrome c-type biogenesis protein VF_1819 IPR003568 Cytochrome c-type biogenesis protein CcmF VF_1819 IPR032523 VF_1819 VF_1820 IPR004329 CcmE/CycJ protein VF_1820 IPR012340 Nucleic acid-binding, OB-fold VF_1821 IPR007078 Haem exporter protein D (CcmD) VF_1822 IPR002541 Cytochrome c assembly protein VF_1822 IPR003557 Cytochrome c-type biogenesis protein CcmC VF_1823 IPR003544 Cytochrome c-type biogenesis protein CcmB VF_1823 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VF_1824 IPR003439 ABC transporter-like VF_1824 IPR003593 AAA+ ATPase domain VF_1824 IPR005895 ABC transporter, haem export, CcmA VF_1824 IPR017871 ABC transporter, conserved site VF_1824 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1825 IPR021244 Protein of unknown function DUF2802 VF_1826 IPR002545 CheW-like protein VF_1828 IPR002545 CheW-like protein VF_1828 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VF_1829 IPR025669 AAA domain VF_1829 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1830 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase VF_1830 IPR001789 Signal transduction response regulator, receiver domain VF_1830 IPR008248 Signal transduction response regulator, chemotaxis, CheB VF_1830 IPR011006 CheY-like superfamily VF_1831 IPR002545 CheW-like protein VF_1831 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1831 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_1831 IPR004105 Histidine kinase CheA-like, homodimeric domain VF_1831 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_1831 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VF_1832 IPR007439 Chemotaxis phosphatase, CheZ VF_1833 IPR001789 Signal transduction response regulator, receiver domain VF_1833 IPR011006 CheY-like superfamily VF_1834 IPR000943 RNA polymerase sigma-70 VF_1834 IPR007624 RNA polymerase sigma-70 region 3 VF_1834 IPR007627 RNA polymerase sigma-70 region 2 VF_1834 IPR007630 RNA polymerase sigma-70 region 4 VF_1834 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1834 IPR012845 RNA polymerase sigma factor, FliA/WhiG VF_1834 IPR013324 RNA polymerase sigma factor, region 3/4 VF_1834 IPR013325 RNA polymerase sigma factor, region 2 VF_1834 IPR014284 RNA polymerase sigma-70 like domain VF_1834 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE VF_1834 IPR028617 RNA polymerase sigma factor FliA VF_1835 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VF_1835 IPR025501 ATP binding protein MinD VF_1835 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1836 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VF_1836 IPR003593 AAA+ ATPase domain VF_1836 IPR020006 Signal-recognition particle (SRP)-type GTPase VF_1836 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1837 IPR001712 Type III secretion system FHIPEP VF_1837 IPR006301 Flagellar biosynthesis protein FlhA VF_1837 IPR025505 FHIPEP conserved site VF_1838 IPR009875 PilZ domain VF_1838 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VF_1838 IPR012349 FMN-binding split barrel VF_1839 IPR006135 Type III secretion system substrate exporter VF_1839 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB VF_1839 IPR029025 Type III secretion system substrate exporter, C-terminal VF_1840 IPR002010 Type III secretion system inner membrane R protein VF_1840 IPR006303 Flagellar biosynthesis protein FliR VF_1841 IPR002191 Bacterial export protein family 3 VF_1841 IPR006305 Flagellar biosynthesis protein FliQ VF_1842 IPR005837 Flagellar transport protein FliP VF_1842 IPR005838 Type III secretion system inner membrane P protein VF_1843 IPR022781 Flagellar biosynthesis protein, FliO VF_1844 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb VF_1844 IPR001543 Surface presentation of antigen (SpoA) VF_1844 IPR012826 Flagellar motor switch FliN VF_1845 IPR001543 Surface presentation of antigen (SpoA) VF_1845 IPR001689 Flagellar motor switch protein FliM VF_1845 IPR028976 CheC-like domain VF_1846 IPR005503 Flagellar basal body-associated protein FliL VF_1847 IPR001635 Flagellar hook-length control protein FliK VF_1847 IPR021136 Flagellar hook-length control protein-like, C-terminal VF_1848 IPR012823 Flagellar export FliJ VF_1849 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VF_1849 IPR003593 AAA+ ATPase domain VF_1849 IPR005714 ATPase, type III secretion system, FliI/YscN VF_1849 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VF_1849 IPR020005 Flagellar export ATPase FliI, clade 1 VF_1849 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1849 IPR032463 VF_1849 VF_1850 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VF_1850 IPR019191 Essential protein Yae1, N-terminal VF_1851 IPR000090 Flagellar motor switch protein FliG VF_1851 IPR011002 Flagellar motor switch protein FliG, alpha-helical VF_1851 IPR023087 VF_1851 VF_1851 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VF_1851 IPR032779 VF_1851 VF_1852 IPR000067 Flagellar M-ring protein FliF VF_1852 IPR006182 Secretory protein YscJ/FliF VF_1852 IPR013556 Flagellar M-ring C-terminal VF_1853 IPR001624 Flagellar hook-basal body complex protein FliE VF_1854 IPR001789 Signal transduction response regulator, receiver domain VF_1854 IPR002078 RNA polymerase sigma factor 54 interaction domain VF_1854 IPR002197 DNA binding HTH domain, Fis-type VF_1854 IPR003593 AAA+ ATPase domain VF_1854 IPR009057 Homeodomain-like VF_1854 IPR011006 CheY-like superfamily VF_1854 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VF_1854 IPR025944 Sigma-54 interaction domain, conserved site VF_1854 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1854 IPR029995 VF_1854 VF_1855 IPR000014 PAS domain VF_1855 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1855 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_1855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_1856 IPR002078 RNA polymerase sigma factor 54 interaction domain VF_1856 IPR002197 DNA binding HTH domain, Fis-type VF_1856 IPR003593 AAA+ ATPase domain VF_1856 IPR009057 Homeodomain-like VF_1856 IPR010518 Flagellar regulatory FleQ VF_1856 IPR011006 CheY-like superfamily VF_1856 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VF_1856 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VF_1856 IPR025944 Sigma-54 interaction domain, conserved site VF_1856 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1858 IPR003713 Flagellar protein FliS VF_1860 IPR003481 Flagellar hook-associated protein 2, N-terminal VF_1860 IPR010809 Flagellar hook-associated 2, C-terminal VF_1860 IPR010810 Flagellin hook, IN motif VF_1861 IPR005186 Flagellar protein FlaG protein VF_1862 IPR001029 Flagellin, D0/D1 domain VF_1862 IPR001492 Flagellin VF_1862 IPR010810 Flagellin hook, IN motif VF_1863 IPR001029 Flagellin, D0/D1 domain VF_1863 IPR001492 Flagellin VF_1863 IPR010810 Flagellin hook, IN motif VF_1864 IPR001029 Flagellin, D0/D1 domain VF_1864 IPR001492 Flagellin VF_1864 IPR010810 Flagellin hook, IN motif VF_1865 IPR001029 Flagellin, D0/D1 domain VF_1865 IPR001492 Flagellin VF_1865 IPR010810 Flagellin hook, IN motif VF_1866 IPR001029 Flagellin, D0/D1 domain VF_1866 IPR001492 Flagellin VF_1866 IPR010810 Flagellin hook, IN motif VF_1867 IPR001029 Flagellin, D0/D1 domain VF_1867 IPR013384 Flagellar hook-associated protein 3 VF_1868 IPR001444 Flagellar basal body rod protein, N-terminal VF_1868 IPR002371 Flagellar hook-associated protein, FlgK VF_1868 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VF_1869 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain VF_1869 IPR013377 Flagellar rod assembly protein/muramidase FlgJ VF_1869 IPR019301 Flagellar protein FlgJ, N-terminal VF_1870 IPR001782 Flagellar P-ring protein VF_1871 IPR000527 Flagellar L-ring protein VF_1872 IPR001444 Flagellar basal body rod protein, N-terminal VF_1872 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VF_1872 IPR012834 Flagellar basal-body rod FlgG VF_1872 IPR019776 Flagellar basal body rod protein, conserved site VF_1872 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VF_1873 IPR001444 Flagellar basal body rod protein, N-terminal VF_1873 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VF_1873 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VF_1874 IPR001444 Flagellar basal body rod protein, N-terminal VF_1874 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VF_1874 IPR011491 Flagellar basal body FlaE VF_1874 IPR019776 Flagellar basal body rod protein, conserved site VF_1874 IPR020013 Fagellar hook-basal body protein, FlgE/F/G VF_1875 IPR005648 Flagellar hook capping protein VF_1875 IPR025963 FlgD Tudor-like domain VF_1875 IPR025965 FlgD Ig-like domain VF_1876 IPR001444 Flagellar basal body rod protein, N-terminal VF_1876 IPR006299 Flagellar basal-body rod protein FlgC VF_1876 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VF_1876 IPR019776 Flagellar basal body rod protein, conserved site VF_1877 IPR006300 Flagellar basal-body rod protein FlgB VF_1878 IPR000780 MCP methyltransferase, CheR-type VF_1878 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal VF_1878 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VF_1878 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1879 IPR001789 Signal transduction response regulator, receiver domain VF_1879 IPR002545 CheW-like protein VF_1879 IPR011006 CheY-like superfamily VF_1879 IPR024181 Chemotaxis response regulator CheV VF_1880 IPR013974 SAF domain VF_1880 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VF_1881 IPR007412 Anti-sigma-28 factor, FlgM VF_1881 IPR031316 VF_1881 VF_1882 IPR007809 FlgN-like domain VF_1883 IPR007293 Protein of unknown function UCP028687 VF_1883 IPR024952 Lipoprotein LPP20-like VF_1884 IPR014549 Uncharacterised conserved integral membrane protein VF_1885 IPR032370 VF_1885 VF_1885 IPR032386 VF_1885 VF_1885 IPR032388 VF_1885 VF_1886 IPR011990 Tetratricopeptide-like helical domain VF_1886 IPR019734 Tetratricopeptide repeat VF_1887 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VF_1887 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site VF_1887 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial VF_1887 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding VF_1887 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1887 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VF_1887 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain VF_1887 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 VF_1889 IPR001702 Porin, Gram-negative type VF_1889 IPR002299 Porin, Neisseria sp. type VF_1889 IPR023614 Porin domain VF_1890 IPR001357 BRCT domain VF_1890 IPR001679 NAD-dependent DNA ligase VF_1890 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 VF_1890 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type VF_1890 IPR004150 NAD-dependent DNA ligase, OB-fold VF_1890 IPR010994 RuvA domain 2-like VF_1890 IPR012340 Nucleic acid-binding, OB-fold VF_1890 IPR013839 NAD-dependent DNA ligase, adenylation VF_1890 IPR013840 NAD-dependent DNA ligase, N-terminal VF_1890 IPR018239 NAD-dependent DNA ligase, active site VF_1890 IPR033136 VF_1890 VF_1891 IPR007449 ZipA, C-terminal FtsZ-binding domain VF_1891 IPR011919 Cell division protein ZipA VF_1892 IPR022985 CysZ, gammaproteobacteria VF_1893 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site VF_1893 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VF_1893 IPR005856 Cysteine synthase K/M VF_1893 IPR005859 Cysteine synthase A VF_1894 IPR000032 Phosphocarrier HPr protein-like VF_1894 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VF_1895 IPR000121 PEP-utilising enzyme, C-terminal VF_1895 IPR006318 Phosphoenolpyruvate-utilising enzyme VF_1895 IPR008279 PEP-utilising enzyme, mobile domain VF_1895 IPR008731 Phosphotransferase system, enzyme I N-terminal VF_1895 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VF_1895 IPR018274 PEP-utilising enzyme, active site VF_1895 IPR023151 PEP-utilising enzyme, conserved site VF_1895 IPR024692 Phosphotransferase system, enzyme I VF_1897 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 VF_1897 IPR011055 Duplicated hybrid motif VF_1898 IPR006314 Dyp-type peroxidase VF_1898 IPR011008 Dimeric alpha-beta barrel VF_1900 IPR021318 Protein of unknown function DUF2919 VF_1901 IPR021339 Protein of unknown function DUF2956 VF_1902 IPR014175 Conserved hypothetical protein CHP02808 VF_1903 IPR005126 NapC/NirT cytochrome c, N-terminal VF_1903 IPR011031 Multihaem cytochrome VF_1903 IPR024717 Denitrification system component NapC/NirT/NrfH VF_1904 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VF_1904 IPR011031 Multihaem cytochrome VF_1904 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain VF_1905 IPR006656 Molybdopterin oxidoreductase VF_1905 IPR006657 Molydopterin dinucleotide-binding domain VF_1905 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain VF_1905 IPR009010 Aspartate decarboxylase-like domain VF_1905 IPR010051 Periplasmic nitrate reductase, large subunit VF_1905 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site VF_1906 IPR005623 Chaperone NapD, nitrate reductase assembly VF_1907 IPR004496 Ferredoxin-type protein NapF VF_1907 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VF_1907 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_1908 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1908 IPR003660 HAMP linker domain VF_1908 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain VF_1908 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing VF_1908 IPR029095 NarX-like, N-terminal VF_1909 IPR000792 Transcription regulator LuxR, C-terminal VF_1909 IPR001789 Signal transduction response regulator, receiver domain VF_1909 IPR011006 CheY-like superfamily VF_1909 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1909 IPR016032 Signal transduction response regulator, C-terminal effector VF_1910 IPR025294 Protein of unknown function DUF4156 VF_1911 IPR017162 Uncharacterised conserved protein UCP037266 VF_1912 IPR008727 PAAR motif VF_1913 IPR006504 Transcriptional regulator Spx/MgsR VF_1913 IPR006660 Arsenate reductase-like VF_1913 IPR012336 Thioredoxin-like fold VF_1914 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VF_1914 IPR002933 Peptidase M20 VF_1914 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria VF_1914 IPR011650 Peptidase M20, dimerisation domain VF_1915 IPR003709 Peptidase M15B/M15C VF_1915 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VF_1916 IPR021550 Protein of unknown function DUF2897 VF_1917 IPR010653 Lipoprotein, NlpB VF_1917 IPR014524 Outer membrane protein assembly factor BamC VF_1918 IPR002220 DapA-like VF_1918 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA VF_1918 IPR013785 Aldolase-type TIM barrel VF_1918 IPR020624 Dihydrodipicolinate synthetase, conserved site VF_1918 IPR020625 Dihydrodipicolinate synthetase, active site VF_1919 IPR016867 Glycine cleavage repressor GcvR VF_1920 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VF_1920 IPR012336 Thioredoxin-like fold VF_1921 IPR002549 Uncharacterised protein family UPF0118 VF_1922 IPR001915 Peptidase M48 VF_1922 IPR011990 Tetratricopeptide-like helical domain VF_1922 IPR030873 VF_1922 VF_1923 IPR006659 Arsenate reductase VF_1923 IPR006660 Arsenate reductase-like VF_1923 IPR012336 Thioredoxin-like fold VF_1924 IPR018643 Protein of unknown function DUF2069, membrane VF_1925 IPR018642 Protein of unknown function DUF2066 VF_1926 IPR006042 Xanthine/uracil permease VF_1926 IPR006043 Xanthine/uracil/vitamin C permease VF_1927 IPR005765 Uracil phosphoribosyl transferase VF_1927 IPR029057 Phosphoribosyltransferase-like VF_1928 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase VF_1928 IPR010918 AIR synthase-related protein, C-terminal domain VF_1928 IPR016188 PurM, N-terminal-like VF_1929 IPR002376 Formyl transferase, N-terminal VF_1929 IPR004607 Phosphoribosylglycinamide formyltransferase VF_1930 IPR026869 Putative glutamine amidotransferase type 2 VF_1930 IPR029055 Nucleophile aminohydrolases, N-terminal VF_1931 IPR001347 Sugar isomerase (SIS) VF_1931 IPR004515 Phosphoheptose isomerase VF_1932 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain VF_1932 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal VF_1932 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain VF_1932 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal VF_1932 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type VF_1934 IPR020010 Conserved hypothetical protein CHP03503 VF_1935 IPR006054 DNA polymerase III, epsilon subunit VF_1935 IPR006309 DNA polymerase 3, epsilon subunit VF_1935 IPR012337 Ribonuclease H-like domain VF_1935 IPR013520 Exonuclease, RNase T/DNA polymerase III VF_1936 IPR002156 Ribonuclease H domain VF_1936 IPR012337 Ribonuclease H-like domain VF_1936 IPR022892 Ribonuclease H VF_1937 IPR013216 Methyltransferase type 11 VF_1937 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_1938 IPR001279 Beta-lactamase-like VF_1938 IPR017782 Hydroxyacylglutathione hydrolase VF_1938 IPR032282 VF_1938 VF_1939 IPR000189 Prokaryotic transglycosylase, active site VF_1939 IPR008258 Lytic transglycosylase-like SLT domain VF_1939 IPR018392 LysM domain VF_1939 IPR023346 Lysozyme-like domain VF_1940 IPR009698 Protein of unknown function DUF1282 VF_1941 IPR005135 Endonuclease/exonuclease/phosphatase VF_1942 IPR002187 Nitrogen regulatory protein PII VF_1942 IPR002332 Nitrogen regulatory protein P-II, urydylation site VF_1942 IPR011322 Nitrogen regulatory PII-like, alpha/beta VF_1942 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VF_1942 IPR017918 Nitrogen regulatory protein PII, conserved site VF_1943 IPR009056 Cytochrome c-like domain VF_1945 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase VF_1945 IPR012094 Lysidine-tRNA(Ile) synthetase VF_1945 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal VF_1945 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal VF_1945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_1945 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain VF_1945 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 VF_1946 IPR001095 Acetyl-CoA carboxylase, alpha subunit VF_1946 IPR029045 ClpP/crotonase-like domain VF_1947 IPR003141 Polymerase/histidinol phosphatase, N-terminal VF_1947 IPR004013 PHP, C-terminal VF_1947 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type VF_1947 IPR004805 DNA polymerase III, alpha subunit VF_1947 IPR011708 Bacterial DNA polymerase III, alpha subunit VF_1947 IPR012340 Nucleic acid-binding, OB-fold VF_1947 IPR016195 Polymerase/histidinol phosphatase-like VF_1947 IPR029460 DNA polymerase, helix-hairpin-helix motif VF_1948 IPR001352 Ribonuclease HII/HIII VF_1948 IPR012337 Ribonuclease H-like domain VF_1948 IPR022898 Ribonuclease HII VF_1948 IPR024567 Ribonuclease HII/HIII domain VF_1949 IPR003835 Glycosyl transferase, family 19 VF_1950 IPR001451 Bacterial transferase hexapeptide repeat VF_1950 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase VF_1950 IPR011004 Trimeric LpxA-like VF_1950 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal VF_1951 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ VF_1951 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ VF_1951 IPR029069 HotDog domain VF_1952 IPR001451 Bacterial transferase hexapeptide repeat VF_1952 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase VF_1952 IPR011004 Trimeric LpxA-like VF_1952 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region VF_1953 IPR005632 Chaperone protein Skp VF_1953 IPR024930 Skp domain VF_1954 IPR000184 Bacterial surface antigen (D15) VF_1954 IPR010827 Surface antigen variable number VF_1954 IPR023707 Outer membrane protein assembly factor BamA VF_1955 IPR001478 PDZ domain VF_1955 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase VF_1955 IPR008915 Peptidase M50 VF_1956 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase VF_1956 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal VF_1956 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal VF_1956 IPR016040 NAD(P)-binding domain VF_1956 IPR026877 DXP reductoisomerase C-terminal domain VF_1957 IPR000374 Phosphatidate cytidylyltransferase VF_1958 IPR001441 Decaprenyl diphosphate synthase-like VF_1958 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site VF_1959 IPR002661 Ribosome recycling factor VF_1959 IPR023584 Ribosome recycling factor domain VF_1960 IPR001048 Aspartate/glutamate/uridylate kinase VF_1960 IPR011817 Uridylate kinase VF_1960 IPR015963 Uridylate kinase, bacteria VF_1961 IPR001816 Translation elongation factor EFTs/EF1B VF_1961 IPR009060 UBA-like VF_1961 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation VF_1961 IPR018101 Translation elongation factor Ts, conserved site VF_1962 IPR001865 Ribosomal protein S2 VF_1962 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid VF_1962 IPR018130 Ribosomal protein S2, conserved site VF_1962 IPR023591 Ribosomal protein S2, flavodoxin-like domain VF_1963 IPR000994 Peptidase M24, structural domain VF_1963 IPR001714 Peptidase M24, methionine aminopeptidase VF_1963 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 VF_1964 IPR002912 ACT domain VF_1964 IPR002934 Nucleotidyl transferase domain VF_1964 IPR003607 HD/PDEase domain VF_1964 IPR006674 HD domain VF_1964 IPR010043 Protein-PII uridylyltransferase VF_1964 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VF_1965 IPR020911 Uncharacterised protein family UPF0325 VF_1966 IPR005665 Protein-export membrane protein SecF, bacterial VF_1966 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VF_1966 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VF_1966 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VF_1967 IPR005791 Protein translocase subunit SecD VF_1967 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VF_1967 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VF_1967 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VF_1967 IPR027398 SecD export protein N-terminal TM domain VF_1968 IPR003849 Preprotein translocase YajC VF_1969 IPR002616 tRNA-guanine(15) transglycosylase-like VF_1969 IPR004803 Queuine tRNA-ribosyltransferase VF_1970 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA VF_1971 IPR000644 CBS domain VF_1971 IPR013785 Aldolase-type TIM barrel VF_1972 IPR006254 Isocitrate lyase VF_1972 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VF_1972 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site VF_1973 IPR001465 Malate synthase VF_1973 IPR006252 Malate synthase A VF_1973 IPR011076 Malate synthase-like VF_1973 IPR019830 Malate synthase, conserved site VF_1974 IPR000847 Transcription regulator HTH, LysR VF_1974 IPR005119 LysR, substrate-binding VF_1974 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1975 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant VF_1975 IPR012336 Thioredoxin-like fold VF_1975 IPR019479 Peroxiredoxin, C-terminal VF_1975 IPR024706 Peroxiredoxin, AhpC-type VF_1976 IPR005627 Copper homeostasis protein CutC VF_1976 IPR023648 Copper homeostasis CutC domain VF_1977 IPR005220 Viral OB-fold, YgiW VF_1978 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VF_1978 IPR027385 Outer membrane protein beta-barrel VF_1979 IPR000847 Transcription regulator HTH, LysR VF_1979 IPR005119 LysR, substrate-binding VF_1979 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1982 IPR026022 PhoU domain VF_1982 IPR028366 Phosphate transport system protein PhoU VF_1983 IPR003439 ABC transporter-like VF_1983 IPR003593 AAA+ ATPase domain VF_1983 IPR005670 Phosphate transport system permease protein 1 VF_1983 IPR017871 ABC transporter, conserved site VF_1983 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1984 IPR000515 MetI-like domain VF_1984 IPR005672 Phosphate transport system permease protein PstA VF_1985 IPR000515 MetI-like domain VF_1985 IPR017986 WD40-repeat-containing domain VF_1986 IPR011862 Phosphate binding protein VF_1986 IPR024370 PBP domain VF_1987 IPR000014 PAS domain VF_1987 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_1987 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_1987 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_1987 IPR013767 PAS fold VF_1987 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR VF_1987 IPR021766 Protein of unknown function DUF3329 VF_1988 IPR001789 Signal transduction response regulator, receiver domain VF_1988 IPR001867 Signal transduction response regulator, C-terminal VF_1988 IPR011006 CheY-like superfamily VF_1988 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB VF_1988 IPR011991 Winged helix-turn-helix DNA-binding domain VF_1989 IPR007476 Putative exonuclease, RdgC VF_1990 IPR001539 Peptidase U32 VF_1990 IPR032525 VF_1990 VF_1991 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VF_1991 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_1992 IPR021928 Protein of unknown function DUF3541 VF_1993 IPR001305 Heat shock protein DnaJ, cysteine-rich domain VF_1993 IPR001623 DnaJ domain VF_1993 IPR002939 Chaperone DnaJ, C-terminal VF_1993 IPR008971 HSP40/DnaJ peptide-binding VF_1993 IPR012724 Chaperone DnaJ VF_1993 IPR018253 DnaJ domain, conserved site VF_1994 IPR012725 Chaperone DnaK VF_1994 IPR013126 Heat shock protein 70 family VF_1994 IPR018181 Heat shock protein 70, conserved site VF_1994 IPR029047 Heat shock protein 70kD, peptide-binding domain VF_1994 IPR029048 Heat shock protein 70kD, C-terminal domain VF_1996 IPR000740 GrpE nucleotide exchange factor VF_1996 IPR009012 GrpE nucleotide exchange factor, head VF_1996 IPR013805 GrpE nucleotide exchange factor, coiled-coil VF_1997 IPR002504 Inorganic polyphosphate/ATP-NAD kinase VF_1997 IPR016064 ATP-NAD kinase-like domain VF_1997 IPR017437 ATP-NAD kinase, PpnK-type, all-beta VF_1997 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 VF_1998 IPR003395 RecF/RecN/SMC, N-terminal VF_1998 IPR004604 DNA recombination/repair protein RecN VF_1998 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_1999 IPR007450 Lipoprotein SmpA/OmlA VF_1999 IPR026592 Outer membrane protein assembly factor BamE VF_2000 IPR005346 RnfH protein VF_2000 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VF_2001 IPR005031 Streptomyces cyclase/dehydrase VF_2001 IPR023393 START-like domain VF_2002 IPR000037 SsrA-binding protein VF_2002 IPR020081 SsrA-binding protein, conserved site VF_2002 IPR023620 Small protein B VF_2003 IPR003497 BRO N-terminal domain VF_2005 IPR019289 Bacteriophage tail protein Gp41, putative VF_2006 IPR010270 Bacteriophage P2, GpM VF_2007 IPR019596 Bacteriophage Mu, GpM, tail tube VF_2008 IPR007067 Tail sheath protein VF_2009 IPR006522 Phage virion morphogensis protein VF_2010 IPR009678 Bacteriophage tail completion protein R VF_2011 IPR009225 Bacteriophage head completion protein GpL VF_2012 IPR006441 Bacteriophage P2, GpN, major capsid VF_2013 IPR009228 Capsid scaffolding protein GpO VF_2014 IPR004921 Terminase, large subunit VF_2014 IPR010332 ATPase terminase subunit, putative VF_2014 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2015 IPR006430 Phage portal protein, PBSX family VF_2015 IPR006944 Bacteriophage/Gene transfer agent portal protein VF_2017 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VF_2020 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 VF_2022 IPR006949 Baseplate assembly protein J-like, predicted VF_2023 IPR010877 Bacteriophage Mu, Gp46 VF_2025 IPR014462 Bacteriophage Mu, Gp45 VF_2027 IPR009826 DNA circulation, N-terminal VF_2030 IPR012337 Ribonuclease H-like domain VF_2030 IPR033390 VF_2030 VF_2036 IPR009679 Bacteriophage 186, CII VF_2037 IPR001387 Cro/C1-type helix-turn-helix domain VF_2037 IPR010982 Lambda repressor-like, DNA-binding domain VF_2037 IPR015927 Peptidase S24/S26A/S26B/S26C VF_2037 IPR019759 Peptidase S24/S26A/S26B VF_2037 IPR028360 Peptidase S24/S26, beta-ribbon domain VF_2040 IPR025474 Domain of unknown function DUF4325 VF_2041 IPR002104 Integrase, catalytic VF_2041 IPR011010 DNA breaking-rejoining enzyme, catalytic core VF_2041 IPR013762 Integrase-like, catalytic core VF_2042 IPR003660 HAMP linker domain VF_2042 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_2042 IPR024478 4HB MCP domain VF_2044 IPR000515 MetI-like domain VF_2045 IPR000515 MetI-like domain VF_2046 IPR003439 ABC transporter-like VF_2046 IPR003593 AAA+ ATPase domain VF_2046 IPR008995 Molybdate/tungstate binding, C-terminal VF_2046 IPR017871 ABC transporter, conserved site VF_2046 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2048 IPR008928 Six-hairpin glycosidase-like VF_2048 IPR010401 Glycogen debranching enzyme VF_2048 IPR024742 Glycogen debranching enzyme, bacterial and archaeal type, N-terminal VF_2048 IPR032790 VF_2048 VF_2049 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain VF_2049 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VF_2049 IPR013780 Glycosyl hydrolase, family 13, all-beta VF_2049 IPR013781 Glycoside hydrolase, catalytic domain VF_2049 IPR013783 Immunoglobulin-like fold VF_2049 IPR014756 Immunoglobulin E-set VF_2049 IPR015902 Glycoside hydrolase, family 13 VF_2049 IPR017853 Glycoside hydrolase, superfamily VF_2049 IPR032091 VF_2049 VF_2051 IPR000847 Transcription regulator HTH, LysR VF_2051 IPR005119 LysR, substrate-binding VF_2051 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2052 IPR006667 SLC41 divalent cation transporters, integral membrane domain VF_2053 IPR029058 Alpha/Beta hydrolase fold VF_2055 IPR004852 Di-haem cytochrome c peroxidase VF_2055 IPR009056 Cytochrome c-like domain VF_2055 IPR023155 Cytochrome c-552/4 VF_2055 IPR025992 Haem-binding domain VF_2056 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase VF_2056 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase VF_2056 IPR023685 Pyridoxal kinase PdxY VF_2056 IPR029056 Ribokinase-like VF_2057 IPR000310 Orn/Lys/Arg decarboxylase, major domain VF_2057 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal VF_2057 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal VF_2057 IPR011193 Ornithine/lysine/arginine decarboxylase VF_2057 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_2057 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_2057 IPR015424 Pyridoxal phosphate-dependent transferase VF_2058 IPR002293 Amino acid/polyamine transporter I VF_2059 IPR001463 Sodium:alanine symporter VF_2060 IPR001867 Signal transduction response regulator, C-terminal VF_2060 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2060 IPR016032 Signal transduction response regulator, C-terminal effector VF_2061 IPR007272 Sulphur transport domain VF_2062 IPR007272 Sulphur transport domain VF_2063 IPR005697 Homoserine O-succinyltransferase VF_2063 IPR029062 Class I glutamine amidotransferase-like VF_2064 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VF_2065 IPR002668 Concentrative nucleoside transporter N-terminal domain VF_2065 IPR008276 Concentrative nucleoside transporter VF_2065 IPR011642 Nucleoside recognition Gate VF_2065 IPR011657 Concentrative nucleoside transporter C-terminal domain VF_2065 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial VF_2066 IPR019275 Protein of unknown function DUF2301 VF_2067 IPR000943 RNA polymerase sigma-70 VF_2067 IPR007624 RNA polymerase sigma-70 region 3 VF_2067 IPR007627 RNA polymerase sigma-70 region 2 VF_2067 IPR007630 RNA polymerase sigma-70 region 4 VF_2067 IPR009042 RNA polymerase sigma-70 region 1.2 VF_2067 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2067 IPR012761 RNA polymerase sigma factor RpoS VF_2067 IPR013324 RNA polymerase sigma factor, region 3/4 VF_2067 IPR013325 RNA polymerase sigma factor, region 2 VF_2067 IPR014284 RNA polymerase sigma-70 like domain VF_2068 IPR011055 Duplicated hybrid motif VF_2068 IPR016047 Peptidase M23 VF_2068 IPR018392 LysM domain VF_2069 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase VF_2069 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2070 IPR002828 Survival protein SurE-like phosphatase/nucleotidase VF_2070 IPR030048 VF_2070 VF_2071 IPR001656 Pseudouridine synthase, TruD VF_2071 IPR020103 Pseudouridine synthase, catalytic domain VF_2071 IPR020119 Pseudouridine synthase TruD, conserved site VF_2072 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase VF_2072 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site VF_2073 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VF_2073 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site VF_2073 IPR029044 Nucleotide-diphospho-sugar transferases VF_2074 IPR007060 Septum formation initiator FtsL/DivIC VF_2074 IPR023081 Cell division protein FtsB VF_2075 IPR000941 Enolase VF_2075 IPR020809 Enolase, conserved site VF_2075 IPR020810 Enolase, C-terminal VF_2075 IPR020811 Enolase, N-terminal VF_2075 IPR029017 Enolase N-terminal domain-like VF_2075 IPR029065 Enolase C-terminal domain-like VF_2076 IPR004468 CTP synthase VF_2076 IPR017456 CTP synthase, N-terminal VF_2076 IPR017926 Glutamine amidotransferase VF_2076 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2076 IPR029062 Class I glutamine amidotransferase-like VF_2078 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VF_2078 IPR011551 NTP pyrophosphohydrolase MazG, bacterial VF_2079 IPR001029 Flagellin, D0/D1 domain VF_2079 IPR001492 Flagellin VF_2079 IPR010810 Flagellin hook, IN motif VF_2080 IPR002912 ACT domain VF_2080 IPR003607 HD/PDEase domain VF_2080 IPR004095 TGS VF_2080 IPR004811 RelA/SpoT family VF_2080 IPR007685 RelA/SpoT VF_2080 IPR012675 Beta-grasp domain VF_2080 IPR012676 TGS-like VF_2081 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD VF_2081 IPR002792 TRAM domain VF_2081 IPR010280 (Uracil-5)-methyltransferase family VF_2081 IPR012340 Nucleic acid-binding, OB-fold VF_2081 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2081 IPR030390 VF_2081 VF_2081 IPR030391 VF_2081 VF_2082 IPR001789 Signal transduction response regulator, receiver domain VF_2082 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_2082 IPR003660 HAMP linker domain VF_2082 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_2082 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_2082 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VF_2082 IPR011006 CheY-like superfamily VF_2082 IPR019247 Histidine kinase BarA, N-terminal VF_2083 IPR002582 Holo-[acyl carrier protein] synthase VF_2083 IPR004568 Phosphopantethiene-protein transferase domain VF_2083 IPR008278 4'-phosphopantetheinyl transferase superfamily VF_2084 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ VF_2084 IPR013785 Aldolase-type TIM barrel VF_2085 IPR003717 Recombination protein O, RecO VF_2085 IPR012340 Nucleic acid-binding, OB-fold VF_2085 IPR022572 DNA replication/recombination mediator RecO, N-terminal VF_2086 IPR004044 K Homology domain, type 2 VF_2086 IPR005225 Small GTP-binding protein domain VF_2086 IPR005662 GTP-binding protein Era VF_2086 IPR006073 GTP binding domain VF_2086 IPR009019 K homology domain, prokaryotic type VF_2086 IPR015946 K homology domain-like, alpha/beta VF_2086 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2087 IPR000999 Ribonuclease III domain VF_2087 IPR011907 Ribonuclease III VF_2087 IPR014720 Double-stranded RNA-binding domain VF_2088 IPR000223 Peptidase S26A, signal peptidase I VF_2088 IPR015927 Peptidase S24/S26A/S26B/S26C VF_2088 IPR019533 Peptidase S26 VF_2088 IPR019756 Peptidase S26A, signal peptidase I, serine active site VF_2088 IPR019757 Peptidase S26A, signal peptidase I, lysine active site VF_2088 IPR019758 Peptidase S26A, signal peptidase I, conserved site VF_2088 IPR019759 Peptidase S24/S26A/S26B VF_2088 IPR019766 Peptidase S26A, all-beta subdomain VF_2088 IPR028360 Peptidase S24/S26, beta-ribbon domain VF_2089 IPR000640 Translation elongation factor EFG, V domain VF_2089 IPR000795 Elongation factor, GTP-binding domain VF_2089 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VF_2089 IPR005225 Small GTP-binding protein domain VF_2089 IPR006297 Elongation factor 4 VF_2089 IPR009000 Translation protein, beta-barrel domain VF_2089 IPR009022 Elongation factor G, III-V domain VF_2089 IPR013842 GTP-binding protein LepA, C-terminal VF_2089 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2089 IPR031157 VF_2089 VF_2090 IPR007359 Positive regulator of sigma(E), RseC/MucC VF_2090 IPR026268 Protein RseC VF_2091 IPR005588 MucB/RseB VF_2091 IPR033434 VF_2091 VF_2091 IPR033436 VF_2091 VF_2092 IPR005572 Anti sigma-E protein RseA, N-terminal VF_2092 IPR005573 Anti sigma-E protein RseA, C-terminal VF_2092 IPR026279 Sigma-E factor negative regulatory protein RseA VF_2093 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site VF_2093 IPR007627 RNA polymerase sigma-70 region 2 VF_2093 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2093 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 VF_2093 IPR013324 RNA polymerase sigma factor, region 3/4 VF_2093 IPR013325 RNA polymerase sigma factor, region 2 VF_2093 IPR014284 RNA polymerase sigma-70 like domain VF_2093 IPR014286 RNA polymerase sigma-70 RpoE type VF_2094 IPR003953 FAD binding domain VF_2094 IPR005288 L-aspartate oxidase VF_2094 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VF_2094 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2094 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VF_2096 IPR005631 Flavinator of succinate dehydrogenase VF_2097 IPR017703 YgfZ/GcvT conserved site VF_2097 IPR023758 tRNA-modifying protein YgfZ VF_2097 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain VF_2098 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VF_2099 IPR009491 Protein of unknown function DUF1107 VF_2100 IPR002938 Monooxygenase, FAD-binding VF_2100 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 VF_2100 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VF_2100 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2101 IPR002938 Monooxygenase, FAD-binding VF_2101 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 VF_2101 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase VF_2101 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site VF_2101 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2102 IPR011978 Uncharacterised protein family UPF0149 VF_2103 IPR007838 Cell division protein ZapA-like VF_2104 IPR002698 5-formyltetrahydrofolate cyclo-ligase VF_2104 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain VF_2105 IPR004788 Ribose 5-phosphate isomerase, type A VF_2105 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup VF_2106 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VF_2106 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VF_2106 IPR016040 NAD(P)-binding domain VF_2106 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 VF_2106 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VF_2106 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VF_2107 IPR007497 Protein of unknown function DUF541 VF_2108 IPR006685 Mechanosensitive ion channel MscS VF_2108 IPR006686 Mechanosensitive ion channel MscS, conserved site VF_2108 IPR008910 Conserved TM helix VF_2108 IPR010920 Like-Sm (LSM) domain VF_2108 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 VF_2108 IPR011066 Mechanosensitive ion channel MscS, C-terminal VF_2109 IPR005583 Uncharacterised protein family UPF0246 VF_2110 IPR001463 Sodium:alanine symporter VF_2111 IPR021932 Protein of unknown function DUF3545 VF_2112 IPR012312 Haemerythrin/HHE cation-binding motif VF_2113 IPR002043 Uracil-DNA glycosylase VF_2113 IPR005122 Uracil-DNA glycosylase-like VF_2113 IPR018085 Uracil-DNA glycosylase, active site VF_2114 IPR001719 AP endonuclease 2 VF_2114 IPR013022 Xylose isomerase-like, TIM barrel domain VF_2114 IPR018246 AP endonuclease 2, zinc binding site VF_2115 IPR001150 Glycine radical domain VF_2115 IPR011140 Autonomous glycyl radical cofactor GrcA VF_2115 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VF_2116 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VF_2116 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VF_2116 IPR004450 Threonine synthase-like VF_2116 IPR029144 Threonine synthase, N-terminal VF_2117 IPR000870 Homoserine kinase VF_2117 IPR006203 GHMP kinase, ATP-binding, conserved site VF_2117 IPR006204 GHMP kinase N-terminal domain VF_2117 IPR013750 GHMP kinase, C-terminal domain VF_2117 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_2117 IPR020568 Ribosomal protein S5 domain 2-type fold VF_2118 IPR001048 Aspartate/glutamate/uridylate kinase VF_2118 IPR001341 Aspartate kinase domain VF_2118 IPR001342 Homoserine dehydrogenase, catalytic VF_2118 IPR002912 ACT domain VF_2118 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VF_2118 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VF_2118 IPR016040 NAD(P)-binding domain VF_2118 IPR018042 Aspartate kinase, conserved site VF_2118 IPR019811 Homoserine dehydrogenase, conserved site VF_2119 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase VF_2119 IPR010203 Regulator of ribonuclease activity A VF_2120 IPR001789 Signal transduction response regulator, receiver domain VF_2120 IPR001867 Signal transduction response regulator, C-terminal VF_2120 IPR011006 CheY-like superfamily VF_2120 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2120 IPR016032 Signal transduction response regulator, C-terminal effector VF_2122 IPR000014 PAS domain VF_2122 IPR001789 Signal transduction response regulator, receiver domain VF_2122 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_2122 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_2122 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_2122 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain VF_2122 IPR011006 CheY-like superfamily VF_2122 IPR013656 PAS fold-4 VF_2122 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB VF_2122 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain VF_2123 IPR005911 Conserved hypothetical protein CHP01212 VF_2123 IPR006638 Elongator protein 3/MiaB/NifB VF_2123 IPR007197 Radical SAM VF_2123 IPR023404 Radical SAM, alpha/beta horseshoe VF_2123 IPR032432 VF_2123 VF_2124 IPR002489 Glutamate synthase, alpha subunit, C-terminal VF_2124 IPR002932 Glutamate synthase domain VF_2124 IPR006982 Glutamate synthase, central-N VF_2124 IPR013785 Aldolase-type TIM barrel VF_2124 IPR017932 Glutamine amidotransferase type 2 domain VF_2124 IPR029055 Nucleophile aminohydrolases, N-terminal VF_2125 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 VF_2125 IPR009051 Alpha-helical ferredoxin VF_2125 IPR016040 NAD(P)-binding domain VF_2125 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2125 IPR028261 Dihydroprymidine dehydrogenase domain II VF_2126 IPR010865 Protein of unknown function DUF1499 VF_2128 IPR000845 Nucleoside phosphorylase domain VF_2128 IPR010049 MTA/SAH nucleosidase VF_2128 IPR018017 Nucleoside phosphorylase VF_2129 IPR004485 Cobalamin biosynthesis CobD/CbiB VF_2130 IPR005115 Uncharacterised domain UPF0126 VF_2131 IPR011055 Duplicated hybrid motif VF_2131 IPR016047 Peptidase M23 VF_2132 IPR001036 Acriflavin resistance protein VF_2132 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VF_2133 IPR006143 RND efflux pump, membrane fusion protein VF_2133 IPR032317 VF_2133 VF_2134 IPR000361 FeS cluster biogenesis VF_2134 IPR016092 FeS cluster insertion protein VF_2134 IPR017870 FeS cluster insertion, C-terminal, conserved site VF_2134 IPR023063 Iron-sulfur cluster insertion protein ErpA VF_2135 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase VF_2135 IPR005814 Aminotransferase class-III VF_2135 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_2135 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_2135 IPR015424 Pyridoxal phosphate-dependent transferase VF_2136 IPR002549 Uncharacterised protein family UPF0118 VF_2137 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VF_2137 IPR007848 Methyltransferase small domain VF_2137 IPR013675 Methyltransferase small, N-terminal VF_2137 IPR023543 rRNA small subunit methyltransferase C VF_2137 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2138 IPR000014 PAS domain VF_2138 IPR001789 Signal transduction response regulator, receiver domain VF_2138 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_2138 IPR003660 HAMP linker domain VF_2138 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_2138 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_2138 IPR011006 CheY-like superfamily VF_2139 IPR000914 Bacterial extracellular solute-binding protein, family 5 VF_2139 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site VF_2139 IPR030678 VF_2139 VF_2140 IPR000515 MetI-like domain VF_2141 IPR000515 MetI-like domain VF_2142 IPR003439 ABC transporter-like VF_2142 IPR003593 AAA+ ATPase domain VF_2142 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VF_2142 IPR017871 ABC transporter, conserved site VF_2142 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2143 IPR003439 ABC transporter-like VF_2143 IPR003593 AAA+ ATPase domain VF_2143 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VF_2143 IPR017871 ABC transporter, conserved site VF_2143 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2144 IPR001701 Glycoside hydrolase, family 9 VF_2144 IPR004197 Glycoside hydrolase, family 9, N-terminal, Ig-like VF_2144 IPR008928 Six-hairpin glycosidase-like VF_2144 IPR012341 Six-hairpin glycosidase VF_2144 IPR013783 Immunoglobulin-like fold VF_2144 IPR014756 Immunoglobulin E-set VF_2145 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type VF_2146 IPR013781 Glycoside hydrolase, catalytic domain VF_2146 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal VF_2146 IPR015883 Glycoside hydrolase family 20, catalytic core VF_2146 IPR017853 Glycoside hydrolase, superfamily VF_2146 IPR025705 Beta-hexosaminidase VF_2146 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VF_2147 IPR005196 Glycoside hydrolase, family 65, N-terminal VF_2147 IPR008928 Six-hairpin glycosidase-like VF_2147 IPR009342 Putative carbohydrate binding domain VF_2147 IPR010383 Glycosyltransferase 36 VF_2147 IPR011013 Galactose mutarotase-like domain VF_2147 IPR012341 Six-hairpin glycosidase VF_2147 IPR033432 VF_2147 VF_2148 IPR005841 Alpha-D-phosphohexomutase superfamily VF_2148 IPR005843 Alpha-D-phosphohexomutase, C-terminal VF_2148 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VF_2148 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VF_2148 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III VF_2148 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VF_2149 IPR003439 ABC transporter-like VF_2149 IPR003593 AAA+ ATPase domain VF_2149 IPR008995 Molybdate/tungstate binding, C-terminal VF_2149 IPR013611 Transport-associated OB, type 2 VF_2149 IPR017871 ABC transporter, conserved site VF_2149 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2150 IPR000515 MetI-like domain VF_2151 IPR026045 Ferric binding protein VF_2152 IPR001905 Ammonium transporter VF_2152 IPR018047 Ammonium transporter, conserved site VF_2152 IPR019879 Ammonium transporter, marine subtype VF_2152 IPR024041 Ammonium transporter AmtB-like domain VF_2152 IPR029020 Ammonium/urea transporter VF_2153 IPR002187 Nitrogen regulatory protein PII VF_2153 IPR002332 Nitrogen regulatory protein P-II, urydylation site VF_2153 IPR011322 Nitrogen regulatory PII-like, alpha/beta VF_2153 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VF_2153 IPR017918 Nitrogen regulatory protein PII, conserved site VF_2154 IPR008249 Uncharacterised protein family UPF0231 VF_2155 IPR008599 Putative sugar diacid recognition VF_2155 IPR009057 Homeodomain-like VF_2155 IPR025736 PucR C-terminal helix-turn-helix domain VF_2156 IPR003474 Gluconate transporter VF_2157 IPR004381 Glycerate kinase VF_2157 IPR018193 Glycerate kinase, flavodoxin-like domain VF_2158 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha VF_2158 IPR004406 Aconitase B, bacterial VF_2158 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VF_2158 IPR015929 Aconitase B, N-terminal, bacterial VF_2158 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 VF_2158 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 VF_2158 IPR015933 Aconitase B, HEAT-like, bacterial VF_2158 IPR015937 Aconitase/isopropylmalate dehydratase VF_2158 IPR018136 Aconitase family, 4Fe-4S cluster binding site VF_2159 IPR002641 Patatin/Phospholipase A2-related VF_2159 IPR010827 Surface antigen variable number VF_2159 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VF_2161 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_2161 IPR004090 Chemotaxis methyl-accepting receptor VF_2161 IPR033480 VF_2161 VF_2162 IPR001264 Glycosyl transferase, family 51 VF_2162 IPR001460 Penicillin-binding protein, transpeptidase VF_2162 IPR011813 Penicillin-binding protein 1B VF_2162 IPR012338 Beta-lactamase/transpeptidase-like VF_2162 IPR023346 Lysozyme-like domain VF_2162 IPR028166 Bifunctional transglycosylase second domain VF_2163 IPR001650 Helicase, C-terminal VF_2163 IPR007502 Helicase-associated domain VF_2163 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type VF_2163 IPR011545 DEAD/DEAH box helicase domain VF_2163 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal VF_2163 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_2163 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2164 IPR005224 Sugar fermentation stimulation protein VF_2165 IPR000962 Zinc finger, DksA/TraR C4-type VF_2165 IPR012784 RNA polymerase-binding transcription factor DksA VF_2165 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VF_2166 IPR002646 Poly A polymerase, head domain VF_2166 IPR010206 Poly(A) polymerase I VF_2166 IPR025866 Polymerase A arginine-rich C-terminal domain VF_2166 IPR032828 VF_2166 VF_2168 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK VF_2169 IPR003700 Ketopantoate hydroxymethyltransferase VF_2169 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VF_2170 IPR003721 Pantoate-beta-alanine ligase VF_2170 IPR004821 Cytidyltransferase-like domain VF_2170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_2171 IPR000412 ABC-2 transporter VF_2171 IPR013525 ABC-2 type transporter VF_2172 IPR003439 ABC transporter-like VF_2172 IPR003593 AAA+ ATPase domain VF_2172 IPR017871 ABC transporter, conserved site VF_2172 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2173 IPR001902 Sulphate anion transporter VF_2173 IPR002645 STAS domain VF_2173 IPR011547 Sulphate transporter VF_2174 IPR001765 Carbonic anhydrase VF_2174 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site VF_2176 IPR000836 Phosphoribosyltransferase domain VF_2176 IPR005904 Hypoxanthine phosphoribosyl transferase VF_2176 IPR029057 Phosphoribosyltransferase-like VF_2177 IPR001647 DNA-binding HTH domain, TetR-type VF_2177 IPR009057 Homeodomain-like VF_2177 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal VF_2177 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_2178 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VF_2178 IPR006258 Dihydrolipoamide dehydrogenase VF_2178 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VF_2178 IPR016156 FAD/NAD-linked reductase, dimerisation domain VF_2178 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2179 IPR000089 Biotin/lipoyl attachment VF_2179 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain VF_2179 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site VF_2179 IPR004167 E3 binding VF_2179 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex VF_2179 IPR011053 Single hybrid motif VF_2179 IPR023213 Chloramphenicol acetyltransferase-like domain VF_2181 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type VF_2181 IPR005474 Transketolase, N-terminal VF_2181 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II VF_2181 IPR029061 Thiamin diphosphate-binding fold VF_2181 IPR033247 VF_2181 VF_2182 IPR000524 Transcription regulator HTH, GntR VF_2182 IPR008920 Transcription regulator FadR/GntR, C-terminal VF_2182 IPR011711 GntR, C-terminal VF_2182 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2183 IPR002502 N-acetylmuramoyl-L-alanine amidase domain VF_2184 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal VF_2184 IPR004393 Nicotinate-nucleotide pyrophosphorylase VF_2184 IPR013785 Aldolase-type TIM barrel VF_2184 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal VF_2184 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD VF_2185 IPR001082 Fimbrial protein pilin VF_2185 IPR012902 Prokaryotic N-terminal methylation site VF_2186 IPR001482 Type II secretion system protein E VF_2186 IPR007831 General secretory system II, protein E, N-terminal VF_2186 IPR013374 ATPase, type IV, pilus assembly, PilB VF_2186 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2187 IPR001992 Type II secretion system conserved site VF_2187 IPR003004 GspF/PilC family VF_2187 IPR018076 Type II secretion system F domain VF_2188 IPR000045 Prepilin type IV endopeptidase, peptidase domain VF_2188 IPR010627 Peptidase A24A, N-terminal VF_2188 IPR014032 Peptidase A24A, prepilin type IV, bacterial VF_2189 IPR001977 Dephospho-CoA kinase VF_2189 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2190 IPR009777 Cell division protein ZapD VF_2190 IPR027462 Z ring-associated protein D, C-terminal domain VF_2191 IPR005584 DNA gyrase inhibitor YacG VF_2191 IPR013088 Zinc finger, NHR/GATA-type VF_2192 IPR000086 NUDIX hydrolase domain VF_2192 IPR003561 Mutator MutT VF_2192 IPR015797 NUDIX hydrolase domain-like VF_2192 IPR020084 NUDIX hydrolase, conserved site VF_2192 IPR020476 NUDIX hydrolase VF_2193 IPR000185 Protein translocase subunit SecA VF_2193 IPR004027 SEC-C motif VF_2193 IPR011115 SecA DEAD-like, N-terminal VF_2193 IPR011116 SecA Wing/Scaffold VF_2193 IPR011130 SecA preprotein, cross-linking domain VF_2193 IPR020937 SecA conserved site VF_2193 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2194 IPR007922 Protein of unknown function DUF721/UPF0232 VF_2195 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase VF_2195 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal VF_2195 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal VF_2195 IPR020568 Ribosomal protein S5 domain 2-type fold VF_2196 IPR000158 Cell division protein FtsZ VF_2196 IPR003008 Tubulin/FtsZ, GTPase domain VF_2196 IPR008280 Tubulin/FtsZ, C-terminal VF_2196 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain VF_2196 IPR020805 Cell division protein FtsZ, conserved site VF_2196 IPR024757 Cell division protein FtsZ, C-terminal VF_2197 IPR003494 SHS2 domain inserted in FtsA VF_2197 IPR020823 Cell division protein FtsA VF_2199 IPR005548 Cell division protein FtsQ/DivIB VF_2199 IPR013685 Polypeptide-transport-associated, FtsQ-type VF_2199 IPR026579 Cell division protein FtsQ VF_2200 IPR000713 Mur ligase, N-terminal VF_2200 IPR004101 Mur ligase, C-terminal VF_2200 IPR005758 UDP-N-acetylmuramate-alanine ligase VF_2200 IPR013221 Mur ligase, central VF_2200 IPR016040 NAD(P)-binding domain VF_2201 IPR004276 Glycosyl transferase, family 28 VF_2201 IPR006009 N-acetylglucosaminyltransferase, MurG VF_2201 IPR007235 Glycosyl transferase, family 28, C-terminal VF_2202 IPR001182 Cell cycle protein FtsW/RodA VF_2202 IPR013437 Cell division protein FtsW VF_2202 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site VF_2203 IPR004101 Mur ligase, C-terminal VF_2203 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase VF_2203 IPR013221 Mur ligase, central VF_2203 IPR016040 NAD(P)-binding domain VF_2204 IPR000715 Glycosyl transferase, family 4 VF_2204 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase VF_2204 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site VF_2205 IPR000713 Mur ligase, N-terminal VF_2205 IPR004101 Mur ligase, C-terminal VF_2205 IPR005863 UDP-MurNAc-pentapeptide synthetase VF_2205 IPR013221 Mur ligase, central VF_2206 IPR000713 Mur ligase, N-terminal VF_2206 IPR004101 Mur ligase, C-terminal VF_2206 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase VF_2206 IPR013221 Mur ligase, central VF_2207 IPR001460 Penicillin-binding protein, transpeptidase VF_2207 IPR005311 Penicillin-binding protein, dimerisation domain VF_2207 IPR012338 Beta-lactamase/transpeptidase-like VF_2208 IPR011922 Cell division protein FtsL VF_2209 IPR002903 Ribosomal RNA small subunit methyltransferase H VF_2209 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain VF_2209 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2210 IPR000878 Tetrapyrrole methylase VF_2210 IPR008189 rRNA small subunit methyltransferase I VF_2210 IPR014776 Tetrapyrrole methylase, subdomain 2 VF_2210 IPR014777 Tetrapyrrole methylase, subdomain 1 VF_2210 IPR018063 SAM-dependent methyltransferase RsmI, conserved site VF_2211 IPR007443 Penicillin-binding protein activator LpoA VF_2211 IPR028082 Periplasmic binding protein-like I VF_2212 IPR003509 Uncharacterised protein family UPF0102 VF_2212 IPR011335 Restriction endonuclease type II-like VF_2212 IPR011856 tRNA endonuclease-like domain VF_2213 IPR001347 Sugar isomerase (SIS) VF_2213 IPR004515 Phosphoheptose isomerase VF_2214 IPR007055 BON domain VF_2215 IPR007481 Stringent starvation protein B VF_2216 IPR004045 Glutathione S-transferase, N-terminal VF_2216 IPR004046 Glutathione S-transferase, C-terminal VF_2216 IPR010987 Glutathione S-transferase, C-terminal-like VF_2216 IPR012336 Thioredoxin-like fold VF_2217 IPR002326 Cytochrome c1 VF_2217 IPR009056 Cytochrome c-like domain VF_2218 IPR005798 Cytochrome b/b6, C-terminal VF_2218 IPR016174 Di-haem cytochrome, transmembrane VF_2218 IPR027387 Cytochrome b/b6-like domain VF_2218 IPR030689 VF_2218 VF_2220 IPR005805 Rieske iron-sulphur protein, C-terminal VF_2220 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit VF_2220 IPR014349 Rieske iron-sulphur protein VF_2220 IPR017941 Rieske [2Fe-2S] iron-sulphur domain VF_2220 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal VF_2221 IPR000754 Ribosomal protein S9 VF_2221 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_2221 IPR020568 Ribosomal protein S5 domain 2-type fold VF_2221 IPR020574 Ribosomal protein S9, conserved site VF_2221 IPR023035 Ribosomal protein S9, bacterial/plastid VF_2222 IPR005822 Ribosomal protein L13 VF_2222 IPR005823 Ribosomal protein L13, bacterial-type VF_2222 IPR023563 Ribosomal protein L13, conserved site VF_2222 IPR023564 Ribosomal protein L13 domain VF_2223 IPR005654 ATPase, AFG1-like VF_2223 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2223 IPR030870 VF_2223 VF_2224 IPR009386 Protein of unknown function DUF1043 VF_2225 IPR001478 PDZ domain VF_2225 IPR001940 Peptidase S1C VF_2225 IPR009003 Trypsin-like cysteine/serine peptidase domain VF_2225 IPR011782 Peptidase S1C, Do VF_2226 IPR001478 PDZ domain VF_2226 IPR001940 Peptidase S1C VF_2226 IPR009003 Trypsin-like cysteine/serine peptidase domain VF_2226 IPR011783 Peptidase S1C, DegS VF_2227 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal VF_2227 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative VF_2227 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel VF_2227 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta VF_2227 IPR013760 DNA topoisomerase, type IIA-like domain VF_2227 IPR024946 Arginine repressor C-terminal-like domain VF_2228 IPR001241 DNA topoisomerase, type IIA VF_2228 IPR002288 DNA gyrase B subunit, C-terminal VF_2228 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_2228 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative VF_2228 IPR006171 Toprim domain VF_2228 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 VF_2228 IPR013759 DNA topoisomerase, type IIA, central domain VF_2228 IPR013760 DNA topoisomerase, type IIA-like domain VF_2228 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_2228 IPR018522 DNA topoisomerase, type IIA, conserved site VF_2228 IPR020568 Ribosomal protein S5 domain 2-type fold VF_2229 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VF_2229 IPR029058 Alpha/Beta hydrolase fold VF_2230 IPR004843 Calcineurin-like phosphoesterase domain, apaH type VF_2230 IPR013622 Calcineurin-like phosphoesterase C-terminal VF_2230 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA VF_2230 IPR029052 Metallo-dependent phosphatase-like VF_2231 IPR009659 Protein of unknown function DUF1249 VF_2232 IPR000086 NUDIX hydrolase domain VF_2232 IPR004385 Nucleoside diphosphate pyrophosphatase VF_2232 IPR015797 NUDIX hydrolase domain-like VF_2232 IPR020084 NUDIX hydrolase, conserved site VF_2233 IPR003423 Outer membrane efflux protein VF_2233 IPR010130 Type I secretion outer membrane protein, TolC VF_2234 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site VF_2234 IPR004821 Cytidyltransferase-like domain VF_2234 IPR011611 Carbohydrate kinase PfkB VF_2234 IPR011913 RfaE bifunctional protein, domain I VF_2234 IPR011914 RfaE bifunctional protein, domain II VF_2234 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_2234 IPR023030 Bifunctional protein HldE VF_2234 IPR029056 Ribokinase-like VF_2235 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain VF_2235 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase VF_2235 IPR023057 Glutamate-ammonia-ligase adenylyltransferase VF_2236 IPR003660 HAMP linker domain VF_2236 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_2237 IPR005821 Ion transport domain VF_2237 IPR027359 Voltage-dependent channel, four helix bundle domain VF_2237 IPR028325 Voltage-gated potassium channel VF_2238 IPR007899 CHAD VF_2238 IPR023577 CYTH-like domain VF_2238 IPR033469 VF_2238 VF_2239 IPR002727 Protein of unknown function DUF47 VF_2239 IPR018445 Putitive phosphate transport regulator VF_2240 IPR001204 Phosphate transporter VF_2241 IPR003646 SH3-like domain, bacterial-type VF_2241 IPR016476 SH3 domain protein VF_2242 IPR032389 VF_2242 VF_2243 IPR002477 Peptidoglycan binding-like VF_2243 IPR003593 AAA+ ATPase domain VF_2243 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2244 IPR002646 Poly A polymerase, head domain VF_2244 IPR006674 HD domain VF_2244 IPR012006 tRNA nucleotidyltransferase, proteobacteria VF_2244 IPR032828 VF_2244 VF_2245 IPR003824 Undecaprenyl-diphosphatase UppP VF_2246 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK VF_2247 IPR006156 Dihydroneopterin aldolase VF_2247 IPR006157 Dihydroneopterin aldolase/epimerase domain VF_2248 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY VF_2249 IPR000905 Gcp-like domain VF_2249 IPR017860 Peptidase M22, conserved site VF_2249 IPR017861 Kae1/YgjD family VF_2249 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD VF_2250 IPR001911 Ribosomal protein S21 VF_2250 IPR018278 Ribosomal protein S21, conserved site VF_2251 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related VF_2251 IPR019004 Uncharacterised domain YOR215C, mitochondrial VF_2251 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VF_2252 IPR002694 Zinc finger, CHC2-type VF_2252 IPR006171 Toprim domain VF_2252 IPR006295 DNA primase, DnaG VF_2252 IPR013173 DNA primase DnaG, DnaB-binding domain VF_2252 IPR013264 DNA primase, catalytic core, N-terminal VF_2252 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VF_2252 IPR019475 DNA primase, DnaB-helicase binding domain VF_2252 IPR030846 VF_2252 VF_2254 IPR000943 RNA polymerase sigma-70 VF_2254 IPR007127 RNA polymerase sigma factor 70, region 1.1 VF_2254 IPR007624 RNA polymerase sigma-70 region 3 VF_2254 IPR007627 RNA polymerase sigma-70 region 2 VF_2254 IPR007630 RNA polymerase sigma-70 region 4 VF_2254 IPR007631 RNA polymerase sigma factor 70, non-essential domain VF_2254 IPR009042 RNA polymerase sigma-70 region 1.2 VF_2254 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2254 IPR012760 RNA polymerase sigma factor RpoD, C-terminal VF_2254 IPR013324 RNA polymerase sigma factor, region 3/4 VF_2254 IPR013325 RNA polymerase sigma factor, region 2 VF_2254 IPR014284 RNA polymerase sigma-70 like domain VF_2254 IPR028630 RNA polymerase sigma factor RpoD VF_2255 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel VF_2255 IPR027385 Outer membrane protein beta-barrel VF_2256 IPR000873 AMP-dependent synthetase/ligase VF_2256 IPR020845 AMP-binding, conserved site VF_2256 IPR025110 AMP-binding enzyme C-terminal domain VF_2258 IPR001697 Pyruvate kinase VF_2258 IPR011037 Pyruvate kinase-like, insert domain VF_2258 IPR015793 Pyruvate kinase, barrel VF_2258 IPR015794 Pyruvate kinase, alpha/beta VF_2258 IPR015795 Pyruvate kinase, C-terminal VF_2258 IPR015806 Pyruvate kinase, beta-barrel insert domain VF_2258 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VF_2258 IPR018209 Pyruvate kinase, active site VF_2259 IPR000524 Transcription regulator HTH, GntR VF_2259 IPR008920 Transcription regulator FadR/GntR, C-terminal VF_2259 IPR011711 GntR, C-terminal VF_2259 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2261 IPR000014 PAS domain VF_2261 IPR000160 GGDEF domain VF_2261 IPR029151 Periplasmic sensor domain-like VF_2261 IPR029787 Nucleotide cyclase VF_2262 IPR004789 Acetolactate synthase, small subunit VF_2262 IPR019455 Acetolactate synthase, small subunit, C-terminal VF_2263 IPR000399 TPP-binding enzyme, conserved site VF_2263 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VF_2263 IPR012000 Thiamine pyrophosphate enzyme, central domain VF_2263 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VF_2263 IPR012846 Acetolactate synthase, large subunit, biosynthetic VF_2263 IPR029035 DHS-like NAD/FAD-binding domain VF_2263 IPR029061 Thiamin diphosphate-binding fold VF_2264 IPR000873 AMP-dependent synthetase/ligase VF_2264 IPR020845 AMP-binding, conserved site VF_2265 IPR000847 Transcription regulator HTH, LysR VF_2265 IPR005119 LysR, substrate-binding VF_2265 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2266 IPR001048 Aspartate/glutamate/uridylate kinase VF_2266 IPR001342 Homoserine dehydrogenase, catalytic VF_2266 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding VF_2266 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I VF_2266 IPR016040 NAD(P)-binding domain VF_2266 IPR018042 Aspartate kinase, conserved site VF_2266 IPR019811 Homoserine dehydrogenase, conserved site VF_2267 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme VF_2267 IPR011821 O-succinylhomoserine (thiol)-lyase VF_2267 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_2267 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_2267 IPR015424 Pyridoxal phosphate-dependent transferase VF_2268 IPR002084 Methionine repressor MetJ VF_2268 IPR010985 Ribbon-helix-helix VF_2268 IPR023453 Methionine repressor MetJ domain VF_2269 IPR006047 Glycosyl hydrolase, family 13, catalytic domain VF_2269 IPR013780 Glycosyl hydrolase, family 13, all-beta VF_2269 IPR013781 Glycoside hydrolase, catalytic domain VF_2269 IPR015902 Glycoside hydrolase, family 13 VF_2269 IPR017853 Glycoside hydrolase, superfamily VF_2270 IPR003192 Porin, LamB type VF_2271 IPR010794 Maltose operon periplasmic VF_2272 IPR001891 Malic oxidoreductase VF_2272 IPR012301 Malic enzyme, N-terminal domain VF_2272 IPR012302 Malic enzyme, NAD-binding VF_2272 IPR015884 Malic enzyme, conserved site VF_2272 IPR016040 NAD(P)-binding domain VF_2273 IPR002150 Ribosomal protein L31 VF_2273 IPR027491 Ribosomal protein L31 type A VF_2274 IPR001650 Helicase, C-terminal VF_2274 IPR005259 Primosomal protein n VF_2274 IPR011545 DEAD/DEAH box helicase domain VF_2274 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_2274 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2275 IPR000843 Transcription regulator HTH, LacI VF_2275 IPR010982 Lambda repressor-like, DNA-binding domain VF_2275 IPR028082 Periplasmic binding protein-like I VF_2276 IPR007730 Sporulation-related domain VF_2277 IPR001353 Proteasome, subunit alpha/beta VF_2277 IPR022281 ATP-dependent protease, HslV subunit VF_2277 IPR029055 Nucleophile aminohydrolases, N-terminal VF_2278 IPR003593 AAA+ ATPase domain VF_2278 IPR003959 ATPase, AAA-type, core VF_2278 IPR004491 Heat shock protein HslU VF_2278 IPR019489 Clp ATPase, C-terminal VF_2278 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2279 IPR003718 OsmC/Ohr family VF_2279 IPR015946 K homology domain-like, alpha/beta VF_2280 IPR000595 Cyclic nucleotide-binding domain VF_2280 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2280 IPR012318 Helix-turn-helix motif, Crp-type VF_2280 IPR014710 RmlC-like jelly roll fold VF_2280 IPR018335 Transcription regulator HTH, Crp-type, conserved site VF_2280 IPR018488 Cyclic nucleotide-binding, conserved site VF_2280 IPR018490 Cyclic nucleotide-binding-like VF_2281 IPR009770 Domain of unknown function DUF1338 VF_2282 IPR015590 Aldehyde dehydrogenase domain VF_2282 IPR016160 Aldehyde dehydrogenase, cysteine active site VF_2282 IPR016161 Aldehyde/histidinol dehydrogenase VF_2282 IPR016162 Aldehyde dehydrogenase, N-terminal VF_2282 IPR016163 Aldehyde dehydrogenase, C-terminal VF_2282 IPR017649 Succinylglutamic semialdehyde dehydrogenase VF_2282 IPR029510 Aldehyde dehydrogenase, glutamic acid active site VF_2283 IPR007041 Arginine N-succinyltransferase Ast/AOST VF_2283 IPR016181 Acyl-CoA N-acyltransferase VF_2283 IPR017650 Arginine N-succinyltransferase AstA VF_2284 IPR004636 Acetylornithine/Succinylornithine transaminase family VF_2284 IPR005814 Aminotransferase class-III VF_2284 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_2284 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 VF_2284 IPR015424 Pyridoxal phosphate-dependent transferase VF_2284 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria VF_2285 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain VF_2285 IPR017926 Glutamine amidotransferase VF_2285 IPR029062 Class I glutamine amidotransferase-like VF_2286 IPR002305 Aminoacyl-tRNA synthetase, class Ic VF_2286 IPR002306 Tryptophan-tRNA ligase VF_2286 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_2286 IPR024109 Tryptophan-tRNA ligase, bacterial-type VF_2287 IPR006346 2-phosphoglycolate phosphatase, prokaryotic VF_2287 IPR006439 HAD hydrolase, subfamily IA VF_2287 IPR006549 HAD-superfamily hydrolase,subfamily IIIA VF_2287 IPR023198 Phosphoglycolate phosphatase, domain 2 VF_2287 IPR023214 HAD-like domain VF_2288 IPR000056 Ribulose-phosphate 3-epimerase-like VF_2288 IPR011060 Ribulose-phosphate binding barrel VF_2288 IPR013785 Aldolase-type TIM barrel VF_2288 IPR026019 Ribulose-phosphate 3-epimerase VF_2289 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VF_2289 IPR012263 Adenine modification methylase, M.EcoRV-type VF_2289 IPR012327 D12 class N6 adenine-specific DNA methyltransferase VF_2289 IPR023095 Adenine-specific methyltransferase, domain 2 VF_2289 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2290 IPR003593 AAA+ ATPase domain VF_2290 IPR007730 Sporulation-related domain VF_2290 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2291 IPR016037 3-dehydroquinate synthase AroB VF_2291 IPR030960 VF_2291 VF_2291 IPR030963 VF_2291 VF_2292 IPR000623 Shikimate kinase/Threonine synthase-like 1 VF_2292 IPR023000 Shikimate kinase, conserved site VF_2292 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2292 IPR031322 VF_2292 VF_2293 IPR001775 GspD/PilQ family VF_2293 IPR004845 Type II secretion system GspD, conserved site VF_2293 IPR004846 Type II/III secretion system VF_2293 IPR005644 NolW-like VF_2293 IPR011662 Secretin/TonB, short N-terminal VF_2293 IPR013355 Type IV pilus secretin PilQ VF_2294 IPR007446 Pilus assembly protein PilP VF_2295 IPR007445 Pilus assembly protein, PilO VF_2295 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VF_2296 IPR007813 Fimbrial assembly PilN VF_2297 IPR005883 Type IV pilus assembly protein PilM VF_2298 IPR001264 Glycosyl transferase, family 51 VF_2298 IPR001460 Penicillin-binding protein, transpeptidase VF_2298 IPR012338 Beta-lactamase/transpeptidase-like VF_2298 IPR012340 Nucleic acid-binding, OB-fold VF_2298 IPR023346 Lysozyme-like domain VF_2298 IPR031376 VF_2298 VF_2299 IPR000847 Transcription regulator HTH, LysR VF_2299 IPR005119 LysR, substrate-binding VF_2299 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2300 IPR002109 Glutaredoxin VF_2300 IPR011767 Glutaredoxin active site VF_2300 IPR011906 Glutaredoxin domain VF_2300 IPR012336 Thioredoxin-like fold VF_2300 IPR013740 Redoxin VF_2300 IPR014025 Glutaredoxin subgroup VF_2301 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VF_2301 IPR016156 FAD/NAD-linked reductase, dimerisation domain VF_2301 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2302 IPR022072 Protein of unknown function DUF3624 VF_2303 IPR000182 GNAT domain VF_2303 IPR000362 Fumarate lyase family VF_2303 IPR008948 L-Aspartase-like VF_2303 IPR009049 Argininosuccinate lyase VF_2303 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase VF_2303 IPR016181 Acyl-CoA N-acyltransferase VF_2303 IPR020557 Fumarate lyase, conserved site VF_2303 IPR022761 Fumarate lyase, N-terminal VF_2303 IPR024083 Fumarase/histidase, N-terminal VF_2303 IPR029419 Argininosuccinate lyase, C-terminal VF_2304 IPR001518 Argininosuccinate synthase VF_2304 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_2304 IPR018223 Argininosuccinate synthase, conserved site VF_2304 IPR023434 Argininosuccinate synthase, type 1 subfamily VF_2304 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body VF_2305 IPR001048 Aspartate/glutamate/uridylate kinase VF_2305 IPR004662 Acetylglutamate kinase VF_2306 IPR000534 Semialdehyde dehydrogenase, NAD-binding VF_2306 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 VF_2306 IPR012280 Semialdehyde dehydrogenase, dimerisation domain VF_2306 IPR016040 NAD(P)-binding domain VF_2306 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site VF_2307 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site VF_2307 IPR002933 Peptidase M20 VF_2307 IPR010169 Acetylornithine deacetylase (ArgE) VF_2307 IPR011650 Peptidase M20, dimerisation domain VF_2308 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain VF_2308 IPR018129 Phosphoenolpyruvate carboxylase, active site VF_2308 IPR021135 Phosphoenolpyruvate carboxylase VF_2308 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type VF_2308 IPR033129 VF_2308 VF_2309 IPR003171 Methylenetetrahydrofolate reductase VF_2309 IPR004620 5,10-methylenetetrahydrofolate reductase VF_2309 IPR029041 FAD-linked oxidoreductase-like VF_2310 IPR000244 Ribosomal protein L9 VF_2310 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VF_2310 IPR020069 Ribosomal protein L9, C-terminal VF_2310 IPR020070 Ribosomal protein L9, N-terminal VF_2310 IPR020594 Ribosomal protein L9, bacteria/chloroplast VF_2311 IPR001648 Ribosomal protein S18 VF_2311 IPR018275 Ribosomal protein S18, conserved site VF_2312 IPR000529 Ribosomal protein S6 VF_2312 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VF_2312 IPR020814 Ribosomal protein S6, plastid/chloroplast VF_2313 IPR001537 tRNA/rRNA methyltransferase, SpoU type VF_2313 IPR004441 RNA methyltransferase TrmH family VF_2313 IPR013123 RNA 2-O ribose methyltransferase, substrate binding VF_2313 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VF_2313 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VF_2313 IPR029028 Alpha/beta knot methyltransferases VF_2313 IPR029064 50S ribosomal protein L30e-like VF_2314 IPR003029 Ribosomal protein S1, RNA-binding domain VF_2314 IPR004476 Ribonuclease II/ribonuclease R VF_2314 IPR011129 Cold shock protein VF_2314 IPR011805 Ribonuclease R VF_2314 IPR012340 Nucleic acid-binding, OB-fold VF_2314 IPR013223 Ribonuclease B, N-terminal OB domain VF_2314 IPR013668 Ribonuclease R winged-helix domain VF_2314 IPR022966 Ribonuclease II/R, conserved site VF_2314 IPR022967 RNA-binding domain, S1 VF_2315 IPR000944 Transcription regulator Rrf2-like VF_2315 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2315 IPR023761 Transcriptional repressor HTH, NsrR VF_2315 IPR030489 VF_2315 VF_2316 IPR000971 Globin VF_2316 IPR001221 Phenol hydroxylase reductase VF_2316 IPR001433 Oxidoreductase FAD/NAD(P)-binding VF_2316 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase VF_2316 IPR008333 Oxidoreductase, FAD-binding domain VF_2316 IPR009050 Globin-like VF_2316 IPR012292 Globin, structural domain VF_2316 IPR017938 Riboflavin synthase-like beta-barrel VF_2316 IPR023950 Flavohemoprotein VF_2317 IPR006597 Sel1-like VF_2317 IPR011990 Tetratricopeptide-like helical domain VF_2318 IPR001114 Adenylosuccinate synthetase VF_2318 IPR018220 Adenylosuccinate synthase, active site VF_2318 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2318 IPR033128 VF_2318 VF_2319 IPR019201 Protein of unknown function DUF2065 VF_2320 IPR001107 Band 7 protein VF_2320 IPR001972 Stomatin family VF_2320 IPR010200 HflC VF_2321 IPR001107 Band 7 protein VF_2321 IPR001972 Stomatin family VF_2321 IPR010201 HflK VF_2321 IPR020980 Menbrane protein HflK, N-terminal VF_2322 IPR006073 GTP binding domain VF_2322 IPR009022 Elongation factor G, III-V domain VF_2322 IPR016496 GTPase HflX VF_2322 IPR025121 GTPase HflX N-terminal domain VF_2322 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2322 IPR032305 VF_2322 VF_2323 IPR005001 Host factor Hfq VF_2323 IPR010920 Like-Sm (LSM) domain VF_2324 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase VF_2324 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2325 IPR002099 DNA mismatch repair protein family VF_2325 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_2325 IPR013507 DNA mismatch repair protein, C-terminal VF_2325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_2325 IPR014762 DNA mismatch repair, conserved site VF_2325 IPR014790 MutL, C-terminal, dimerisation VF_2325 IPR020568 Ribosomal protein S5 domain 2-type fold VF_2325 IPR020667 DNA mismatch repair protein, MutL VF_2326 IPR002508 Cell wall hydrolase/autolysin, catalytic VF_2326 IPR018392 LysM domain VF_2326 IPR021731 AMIN domain VF_2327 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE VF_2327 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2328 IPR004453 Epoxyqueuosine reductase QueG VF_2328 IPR013542 Domain of unknown function DUF1730 VF_2328 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_2329 IPR012337 Ribonuclease H-like domain VF_2329 IPR013520 Exonuclease, RNase T/DNA polymerase III VF_2329 IPR022894 Oligoribonuclease VF_2330 IPR004881 Ribosome biogenesis GTPase RsgA, putative VF_2330 IPR010914 EngC GTPase VF_2330 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2331 IPR003817 Phosphatidylserine decarboxylase-related VF_2331 IPR033177 VF_2331 VF_2331 IPR033178 VF_2331 VF_2332 IPR000620 Drug/metabolite transporter VF_2333 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) VF_2333 IPR004525 Elongation factor P--(R)-beta-lysine ligase VF_2333 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like VF_2334 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site VF_2334 IPR003953 FAD binding domain VF_2334 IPR005884 Fumarate reductase, flavoprotein subunit VF_2334 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit VF_2334 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal VF_2334 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2334 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain VF_2334 IPR030664 VF_2334 VF_2335 IPR001041 2Fe-2S ferredoxin-type domain VF_2335 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein VF_2335 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site VF_2335 IPR009051 Alpha-helical ferredoxin VF_2335 IPR012675 Beta-grasp domain VF_2335 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VF_2335 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_2335 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal VF_2336 IPR003510 Fumarate reductase, subunit C VF_2337 IPR003418 Fumarate reductase, D subunit VF_2338 IPR001059 Translation elongation factor P/YeiP, central VF_2338 IPR008991 Translation protein SH3-like domain VF_2338 IPR011768 Translation elongation factor P VF_2338 IPR012340 Nucleic acid-binding, OB-fold VF_2338 IPR013185 Translation elongation factor, KOW-like VF_2338 IPR013852 Translation elongation factor P/YeiP, conserved site VF_2338 IPR014722 Ribosomal protein L2 domain 2 VF_2338 IPR015365 Elongation factor P, C-terminal VF_2338 IPR020599 Translation elongation factor P/YeiP VF_2339 IPR003739 Lysine-2,3-aminomutase family VF_2339 IPR007197 Radical SAM VF_2339 IPR013785 Aldolase-type TIM barrel VF_2339 IPR022462 Lysine-2,3-aminomutase-like VF_2340 IPR000023 Phosphofructokinase domain VF_2340 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type VF_2340 IPR012828 6-phosphofructokinase VF_2340 IPR015912 Phosphofructokinase, conserved site VF_2340 IPR022953 Phosphofructokinase VF_2341 IPR002524 Cation efflux protein VF_2341 IPR027469 Cation efflux protein transmembrane domain VF_2341 IPR027470 Cation efflux protein cytoplasmic domain VF_2342 IPR012899 LTXXQ motif family protein VF_2343 IPR001789 Signal transduction response regulator, receiver domain VF_2343 IPR001867 Signal transduction response regulator, C-terminal VF_2343 IPR011006 CheY-like superfamily VF_2343 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2343 IPR016032 Signal transduction response regulator, C-terminal effector VF_2344 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_2344 IPR003660 HAMP linker domain VF_2344 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_2344 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_2344 IPR032404 VF_2344 VF_2345 IPR001537 tRNA/rRNA methyltransferase, SpoU type VF_2345 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase VF_2345 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VF_2345 IPR029028 Alpha/beta knot methyltransferases VF_2347 IPR001451 Bacterial transferase hexapeptide repeat VF_2347 IPR005881 Serine O-acetyltransferase VF_2347 IPR010493 Serine acetyltransferase, N-terminal VF_2347 IPR011004 Trimeric LpxA-like VF_2347 IPR018357 Hexapeptide transferase, conserved site VF_2348 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal VF_2348 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent VF_2348 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VF_2348 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal VF_2348 IPR013328 Dehydrogenase, multihelical VF_2348 IPR016040 NAD(P)-binding domain VF_2349 IPR003708 Bacterial protein export chaperone SecB VF_2350 IPR001763 Rhodanese-like domain VF_2351 IPR011055 Duplicated hybrid motif VF_2351 IPR016047 Peptidase M23 VF_2352 IPR007313 FxsA cytoplasmic membrane protein VF_2353 IPR000362 Fumarate lyase family VF_2353 IPR004708 Aspartate ammonia-lyase VF_2353 IPR008948 L-Aspartase-like VF_2353 IPR018951 Fumarase C, C-terminal VF_2353 IPR020557 Fumarate lyase, conserved site VF_2353 IPR022761 Fumarate lyase, N-terminal VF_2353 IPR024083 Fumarase/histidase, N-terminal VF_2354 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VF_2355 IPR006015 Universal stress protein A VF_2355 IPR006016 UspA VF_2355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_2356 IPR003834 Cytochrome c assembly protein, transmembrane domain VF_2356 IPR012336 Thioredoxin-like fold VF_2356 IPR017937 Thioredoxin, conserved site VF_2356 IPR022910 Thiol:disulphide interchange protein DsbD VF_2356 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VF_2357 IPR004547 Glucosamine-6-phosphate isomerase VF_2357 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase VF_2357 IPR018321 Glucosamine-6-phosphate isomerase, conserved site VF_2358 IPR011701 Major facilitator superfamily VF_2358 IPR020846 Major facilitator superfamily domain VF_2359 IPR016130 Protein-tyrosine phosphatase, active site VF_2359 IPR022778 CDKN3 domain VF_2359 IPR029021 Protein-tyrosine phosphatase-like VF_2360 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I VF_2360 IPR016040 NAD(P)-binding domain VF_2360 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain VF_2360 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain VF_2360 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site VF_2360 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family VF_2361 IPR001845 HTH ArsR-type DNA-binding domain VF_2361 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2362 IPR000160 GGDEF domain VF_2362 IPR003018 GAF domain VF_2362 IPR029016 GAF domain-like VF_2362 IPR029787 Nucleotide cyclase VF_2363 IPR000184 Bacterial surface antigen (D15) VF_2364 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II VF_2364 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2366 IPR006127 Periplasmic solute binding protein family VF_2367 IPR003439 ABC transporter-like VF_2367 IPR003593 AAA+ ATPase domain VF_2367 IPR017871 ABC transporter, conserved site VF_2367 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2368 IPR001626 ABC-3 VF_2368 IPR029022 ABC transporter, BtuC-like VF_2369 IPR001451 Bacterial transferase hexapeptide repeat VF_2369 IPR011004 Trimeric LpxA-like VF_2370 IPR003495 CobW/HypB/UreG domain VF_2370 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2372 IPR001347 Sugar isomerase (SIS) VF_2372 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising VF_2372 IPR029055 Nucleophile aminohydrolases, N-terminal VF_2373 IPR001034 HTH DeoR N-terminal domain VF_2373 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2373 IPR014036 DeoR C-terminal sensor domain VF_2373 IPR018356 Transcription regulator, HTH DeoR-type, conserved site VF_2374 IPR000792 Transcription regulator LuxR, C-terminal VF_2374 IPR001789 Signal transduction response regulator, receiver domain VF_2374 IPR011006 CheY-like superfamily VF_2374 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2374 IPR016032 Signal transduction response regulator, C-terminal effector VF_2375 IPR002771 Multiple antibiotic resistance (MarC)-related VF_2376 IPR019886 Sodium symporter small subunit, predicted VF_2377 IPR001734 Sodium/solute symporter VF_2377 IPR019899 Sodium/solute symporter, VC2705 subfamily VF_2379 IPR000014 PAS domain VF_2379 IPR001789 Signal transduction response regulator, receiver domain VF_2379 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_2379 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_2379 IPR004358 Signal transduction histidine kinase-related protein, C-terminal VF_2379 IPR011006 CheY-like superfamily VF_2380 IPR020846 Major facilitator superfamily domain VF_2380 IPR024989 Major facilitator superfamily associated domain VF_2380 IPR026032 Phenylproprionate/maltose permease VF_2381 IPR000595 Cyclic nucleotide-binding domain VF_2381 IPR000644 CBS domain VF_2381 IPR005105 Protein-PII uridylyltransferase, N-terminal VF_2381 IPR014710 RmlC-like jelly roll fold VF_2381 IPR018490 Cyclic nucleotide-binding-like VF_2381 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VF_2382 IPR012337 Ribonuclease H-like domain VF_2382 IPR013520 Exonuclease, RNase T/DNA polymerase III VF_2383 IPR000873 AMP-dependent synthetase/ligase VF_2383 IPR011904 Acetate-CoA ligase VF_2383 IPR020845 AMP-binding, conserved site VF_2383 IPR025110 AMP-binding enzyme C-terminal domain VF_2383 IPR032387 VF_2383 VF_2385 IPR001874 Dehydroquinase, class II VF_2385 IPR018509 Dehydroquinase, class II, conserved site VF_2386 IPR000089 Biotin/lipoyl attachment VF_2386 IPR001249 Acetyl-CoA biotin carboxyl carrier VF_2386 IPR001882 Biotin-binding site VF_2386 IPR011053 Single hybrid motif VF_2387 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase VF_2387 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VF_2387 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal VF_2387 IPR005482 Biotin carboxylase, C-terminal VF_2387 IPR011054 Rudiment single hybrid motif VF_2387 IPR013815 ATP-grasp fold, subdomain 1 VF_2387 IPR013816 ATP-grasp fold, subdomain 2 VF_2387 IPR016185 Pre-ATP-grasp domain VF_2388 IPR004498 Ribosomal protein L11 methyltransferase VF_2388 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2389 IPR001269 tRNA-dihydrouridine synthase VF_2389 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 VF_2389 IPR013785 Aldolase-type TIM barrel VF_2389 IPR018517 tRNA-dihydrouridine synthase, conserved site VF_2389 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal VF_2389 IPR032887 VF_2389 VF_2391 IPR002197 DNA binding HTH domain, Fis-type VF_2391 IPR005412 DNA-binding protein Fis VF_2391 IPR009057 Homeodomain-like VF_2393 IPR000551 MerR-type HTH domain VF_2393 IPR009061 DNA binding domain, putative VF_2393 IPR011788 Zn(II)-responsive transcriptional regulator VF_2394 IPR002695 AICARFT/IMPCHase bienzyme VF_2394 IPR011607 Methylglyoxal synthase-like domain VF_2394 IPR016193 Cytidine deaminase-like VF_2394 IPR024051 AICAR transformylase domain VF_2395 IPR000115 Phosphoribosylglycinamide synthetase VF_2395 IPR011054 Rudiment single hybrid motif VF_2395 IPR013815 ATP-grasp fold, subdomain 1 VF_2395 IPR013816 ATP-grasp fold, subdomain 2 VF_2395 IPR016185 Pre-ATP-grasp domain VF_2395 IPR020559 Phosphoribosylglycinamide synthetase, conserved site VF_2395 IPR020560 Phosphoribosylglycinamide synthetase, C-domain VF_2395 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VF_2395 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal VF_2396 IPR010858 Protein of unknown function DUF1481 VF_2396 IPR016872 Uncharacterised conserved protein UCP028160 VF_2397 IPR000119 Histone-like bacterial DNA-binding protein VF_2397 IPR010992 Integration host factor (IHF)-like DNA-binding domain VF_2397 IPR020816 Histone-like DNA-binding protein, conserved site VF_2398 IPR000644 CBS domain VF_2398 IPR002550 Domain of unknown function DUF21 VF_2399 IPR007338 Protein of unknown function DUF416 VF_2399 IPR023381 YP001051499.1-like domain VF_2400 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain VF_2400 IPR016040 NAD(P)-binding domain VF_2401 IPR007791 Heat shock protein DnaJ-like protein DjlA VF_2401 IPR029024 TerB-like VF_2402 IPR000257 Uroporphyrinogen decarboxylase (URO-D) VF_2402 IPR006361 Uroporphyrinogen decarboxylase HemE VF_2403 IPR000086 NUDIX hydrolase domain VF_2403 IPR015376 Zinc ribbon, NADH pyrophosphatase VF_2403 IPR015797 NUDIX hydrolase domain-like VF_2403 IPR020084 NUDIX hydrolase, conserved site VF_2404 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VF_2405 IPR005534 Curli production assembly/transport component CsgG VF_2406 IPR018893 Type VIII secretion system, CsgF VF_2407 IPR018900 Curli assembly protein CsgE VF_2408 IPR000792 Transcription regulator LuxR, C-terminal VF_2408 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2408 IPR016032 Signal transduction response regulator, C-terminal effector VF_2409 IPR009742 Curlin associated VF_2410 IPR009742 Curlin associated VF_2412 IPR000722 RNA polymerase, alpha subunit VF_2412 IPR006592 RNA polymerase, N-terminal VF_2412 IPR007066 RNA polymerase Rpb1, domain 3 VF_2412 IPR007080 RNA polymerase Rpb1, domain 1 VF_2412 IPR007081 RNA polymerase Rpb1, domain 5 VF_2412 IPR007083 RNA polymerase Rpb1, domain 4 VF_2412 IPR012754 DNA-directed RNA polymerase, subunit beta-prime VF_2414 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 VF_2414 IPR007121 RNA polymerase, beta subunit, conserved site VF_2414 IPR007641 RNA polymerase Rpb2, domain 7 VF_2414 IPR007642 RNA polymerase Rpb2, domain 2 VF_2414 IPR007644 RNA polymerase, beta subunit, protrusion VF_2414 IPR007645 RNA polymerase Rpb2, domain 3 VF_2414 IPR010243 DNA-directed RNA polymerase, beta subunit VF_2414 IPR014724 RNA polymerase Rpb2, OB-fold VF_2414 IPR015712 DNA-directed RNA polymerase, subunit 2 VF_2414 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain VF_2415 IPR000206 Ribosomal protein L7/L12 VF_2415 IPR008932 Ribosomal protein L7/L12, oligomerisation VF_2415 IPR013823 Ribosomal protein L7/L12, C-terminal VF_2415 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VF_2416 IPR001790 Ribosomal protein L10/acidic P0 VF_2418 IPR002143 Ribosomal protein L1 VF_2418 IPR005878 Ribosomal protein L1, bacterial-type VF_2418 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich VF_2418 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VF_2418 IPR023673 Ribosomal protein L1, conserved site VF_2418 IPR023674 Ribosomal protein L1-like VF_2418 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VF_2419 IPR000911 Ribosomal protein L11/L12 VF_2419 IPR006519 Ribosomal protein L11, bacterial-type VF_2419 IPR020783 Ribosomal protein L11, C-terminal VF_2419 IPR020784 Ribosomal protein L11, N-terminal VF_2419 IPR020785 Ribosomal protein L11, conserved site VF_2421 IPR001062 Transcription antitermination protein, NusG VF_2421 IPR005824 KOW VF_2421 IPR006645 NusG, N-terminal VF_2421 IPR008991 Translation protein SH3-like domain VF_2421 IPR014722 Ribosomal protein L2 domain 2 VF_2421 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VF_2422 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit VF_2422 IPR005807 SecE subunit of protein translocation complex VF_2422 IPR022943 Preprotein translocase subunit SecE VF_2423 IPR000795 Elongation factor, GTP-binding domain VF_2423 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VF_2423 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 VF_2423 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle VF_2423 IPR005225 Small GTP-binding protein domain VF_2423 IPR009000 Translation protein, beta-barrel domain VF_2423 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VF_2423 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2423 IPR031157 VF_2423 VF_2424 IPR004566 Bacterial pantothenate kinase VF_2424 IPR006083 Phosphoribulokinase/uridine kinase VF_2424 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2425 IPR003142 Biotin protein ligase, C-terminal VF_2425 IPR004143 Biotin/lipoate A/B protein ligase VF_2425 IPR004408 Biotin--acetyl-CoA-carboxylase ligase VF_2425 IPR008988 Transcriptional repressor, C-terminal VF_2425 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2425 IPR013196 Helix-turn-helix, type 11 VF_2425 IPR030855 VF_2425 VF_2426 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase VF_2426 IPR006094 FAD linked oxidase, N-terminal VF_2426 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal VF_2426 IPR016166 FAD-binding, type 2 VF_2426 IPR016167 FAD-binding, type 2, subdomain 1 VF_2426 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 VF_2427 IPR016181 Acyl-CoA N-acyltransferase VF_2428 IPR001736 Phospholipase D/Transphosphatidylase VF_2428 IPR016270 Phospholipase D, phosphatidylserine synthase type VF_2428 IPR025202 Phospholipase D-like domain VF_2432 IPR000504 RNA recognition motif domain VF_2432 IPR012677 Nucleotide-binding, alpha-beta plait VF_2433 IPR001920 Asp/Glu racemase VF_2433 IPR004391 Glutamate racemase VF_2433 IPR015942 Asp/Glu/hydantoin racemase VF_2433 IPR018187 Asp/Glu racemase, active site VF_2433 IPR033134 VF_2433 VF_2434 IPR002761 DUF71 domain VF_2434 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_2435 IPR000531 TonB-dependent receptor, beta-barrel VF_2435 IPR010101 TonB-dependent vitamin B12 transporter BtuB VF_2435 IPR010916 TonB box, conserved site VF_2435 IPR012910 TonB-dependent receptor, plug VF_2436 IPR010280 (Uracil-5)-methyltransferase family VF_2436 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA VF_2436 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2436 IPR030390 VF_2436 VF_2436 IPR030391 VF_2436 VF_2437 IPR009867 Protein of unknown function DUF1422 VF_2438 IPR001647 DNA-binding HTH domain, TetR-type VF_2438 IPR009057 Homeodomain-like VF_2438 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_2438 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VF_2439 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VF_2439 IPR016156 FAD/NAD-linked reductase, dimerisation domain VF_2439 IPR022962 Soluble pyridine nucleotide transhydrogenase VF_2439 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2440 IPR002528 Multi antimicrobial extrusion protein VF_2441 IPR007213 Leucine carboxyl methyltransferase VF_2441 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP VF_2441 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2442 IPR006197 Peptidase S24, LexA-like VF_2442 IPR006199 LexA repressor, DNA-binding domain VF_2442 IPR006200 LexA repressor VF_2442 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2442 IPR015927 Peptidase S24/S26A/S26B/S26C VF_2442 IPR019759 Peptidase S24/S26A/S26B VF_2442 IPR028360 Peptidase S24/S26, beta-ribbon domain VF_2443 IPR002123 Phospholipid/glycerol acyltransferase VF_2443 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase VF_2443 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB VF_2444 IPR000537 UbiA prenyltransferase family VF_2444 IPR006370 4-hydroxybenzoate polyprenyl transferase VF_2444 IPR031103 VF_2444 VF_2445 IPR007440 Chorismate--pyruvate lyase VF_2445 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain VF_2446 IPR005503 Flagellar basal body-associated protein FliL VF_2447 IPR002610 Peptidase S54, rhomboid VF_2447 IPR022732 Peptidase S54, GlpG peptidase, N-terminal VF_2447 IPR022764 Peptidase S54, rhomboid domain VF_2447 IPR023662 Rhomboid protease GlpG VF_2448 IPR001763 Rhodanese-like domain VF_2448 IPR023695 Thiosulfate sulfurtransferase, bacterial VF_2450 IPR000943 RNA polymerase sigma-70 VF_2450 IPR007627 RNA polymerase sigma-70 region 2 VF_2450 IPR007630 RNA polymerase sigma-70 region 4 VF_2450 IPR009042 RNA polymerase sigma-70 region 1.2 VF_2450 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2450 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria VF_2450 IPR013324 RNA polymerase sigma factor, region 3/4 VF_2450 IPR013325 RNA polymerase sigma factor, region 2 VF_2450 IPR014284 RNA polymerase sigma-70 like domain VF_2451 IPR003838 Permease FtsX-like VF_2451 IPR004513 ABC transporter, cell division protein FtsX VF_2452 IPR003439 ABC transporter-like VF_2452 IPR003593 AAA+ ATPase domain VF_2452 IPR005286 Cell division protein FtsE, ATP-binding VF_2452 IPR017871 ABC transporter, conserved site VF_2452 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2453 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain VF_2453 IPR003593 AAA+ ATPase domain VF_2453 IPR004390 Signal-recognition particle receptor FtsY VF_2453 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle VF_2453 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2454 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VF_2454 IPR004398 RNA methyltransferase, RsmD VF_2454 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2455 IPR009525 Protein of unknown function DUF1145 VF_2456 IPR002771 Multiple antibiotic resistance (MarC)-related VF_2457 IPR019620 Putative metal-binding protein VF_2459 IPR019635 Protein of unknown function DUF2500 VF_2460 IPR001650 Helicase, C-terminal VF_2460 IPR004609 ATP-dependent DNA helicase RecG VF_2460 IPR011545 DEAD/DEAH box helicase domain VF_2460 IPR012340 Nucleic acid-binding, OB-fold VF_2460 IPR014001 Helicase, superfamily 1/2, ATP-binding domain VF_2460 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2460 IPR033454 VF_2460 VF_2461 IPR000361 FeS cluster biogenesis VF_2461 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal VF_2461 IPR017726 Fe/S biogenesis protein NfuA VF_2462 IPR000760 Inositol monophosphatase VF_2462 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial VF_2463 IPR000086 NUDIX hydrolase domain VF_2463 IPR015797 NUDIX hydrolase domain-like VF_2463 IPR020084 NUDIX hydrolase, conserved site VF_2464 IPR022792 Type II secretion system, protein N VF_2465 IPR007690 Type II secretion system, protein M VF_2465 IPR023229 Type II secretion system protein M, periplasmic domain VF_2466 IPR007812 Type II secretion system protein L VF_2466 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VF_2466 IPR025691 GspL periplasmic domain VF_2467 IPR005628 General secretion pathway protein K VF_2468 IPR010055 Type II secretion system protein J VF_2468 IPR012902 Prokaryotic N-terminal methylation site VF_2469 IPR003413 Type II secretion system protein I domain VF_2469 IPR010052 Type II secretion system protein I VF_2469 IPR012902 Prokaryotic N-terminal methylation site VF_2470 IPR002416 Type II secretion system protein H VF_2470 IPR012902 Prokaryotic N-terminal methylation site VF_2470 IPR022346 General secretion pathway, GspH VF_2471 IPR000983 Bacterial general secretion pathway protein G-type pilin VF_2471 IPR010054 General secretion pathway protein G VF_2471 IPR012902 Prokaryotic N-terminal methylation site VF_2471 IPR013545 Type II secretion system protein G VF_2472 IPR001992 Type II secretion system conserved site VF_2472 IPR003004 GspF/PilC family VF_2472 IPR011850 General secretion pathway protein F VF_2472 IPR018076 Type II secretion system F domain VF_2473 IPR001482 Type II secretion system protein E VF_2473 IPR003593 AAA+ ATPase domain VF_2473 IPR013369 Type II secretion system GspE VF_2473 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2474 IPR001775 GspD/PilQ family VF_2474 IPR004845 Type II secretion system GspD, conserved site VF_2474 IPR004846 Type II/III secretion system VF_2474 IPR005644 NolW-like VF_2474 IPR013356 Type II secretion system GspD VF_2475 IPR001478 PDZ domain VF_2475 IPR001639 Type II secretion system protein C VF_2475 IPR024961 VF_2475 VF_2476 IPR002942 RNA-binding S4 domain VF_2476 IPR025708 Heat shock protein 15 VF_2477 IPR000397 Heat shock protein Hsp33 VF_2477 IPR016153 Heat shock protein Hsp33, N-terminal VF_2477 IPR016154 Heat shock protein Hsp33, C-terminal VF_2477 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain VF_2478 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising VF_2478 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal VF_2478 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal VF_2478 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site VF_2479 IPR007844 AsmA VF_2479 IPR012334 Pectin lyase fold VF_2480 IPR001633 EAL domain VF_2480 IPR013976 Metal-dependent hydrolase HDOD VF_2480 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VF_2481 IPR000073 Alpha/beta hydrolase fold-1 VF_2481 IPR022742 Putative lysophospholipase VF_2481 IPR029058 Alpha/Beta hydrolase fold VF_2482 IPR000150 Cof protein VF_2482 IPR006379 HAD-superfamily hydrolase, subfamily IIB VF_2482 IPR023214 HAD-like domain VF_2483 IPR002104 Integrase, catalytic VF_2483 IPR004107 Integrase, SAM-like, N-terminal VF_2483 IPR011010 DNA breaking-rejoining enzyme, catalytic core VF_2483 IPR011931 Tyrosine recombinase XerC VF_2483 IPR013762 Integrase-like, catalytic core VF_2483 IPR023009 Tyrosine recombinase XerC/XerD VF_2483 IPR023109 Integrase/recombinase, N-terminal VF_2484 IPR001653 Diaminopimelate epimerase, DapF VF_2484 IPR018510 Diaminopimelate epimerase, active site VF_2485 IPR000183 Ornithine/DAP/Arg decarboxylase VF_2485 IPR002986 Diaminopimelate decarboxylase, LysA VF_2485 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal VF_2485 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal VF_2485 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal VF_2485 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VF_2485 IPR029066 PLP-binding barrel VF_2486 IPR002908 Frataxin/CyaY VF_2486 IPR020895 Frataxin conserved site VF_2487 IPR001567 Peptidase M3A/M3B VF_2487 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VF_2487 IPR024079 Metallopeptidase, catalytic domain VF_2487 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal VF_2488 IPR002052 DNA methylase, N-6 adenine-specific, conserved site VF_2488 IPR007473 Ribosomal RNA large subunit methyltransferase J VF_2488 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2489 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VF_2489 IPR006322 Glutathione reductase, eukaryote/bacterial VF_2489 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site VF_2489 IPR016156 FAD/NAD-linked reductase, dimerisation domain VF_2489 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2490 IPR001647 DNA-binding HTH domain, TetR-type VF_2490 IPR009057 Homeodomain-like VF_2490 IPR027404 LuxT regulator, helix hairpin domain VF_2491 IPR005594 YadA-like, C-terminal VF_2492 IPR012336 Thioredoxin-like fold VF_2493 IPR012336 Thioredoxin-like fold VF_2493 IPR013766 Thioredoxin domain VF_2493 IPR017937 Thioredoxin, conserved site VF_2494 IPR003834 Cytochrome c assembly protein, transmembrane domain VF_2494 IPR012336 Thioredoxin-like fold VF_2494 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VF_2496 IPR000719 Protein kinase domain VF_2496 IPR008271 Serine/threonine-protein kinase, active site VF_2496 IPR011009 Protein kinase-like domain VF_2496 IPR017441 Protein kinase, ATP binding site VF_2498 IPR011517 RNA polymerase sigma-70 ECF-like VF_2498 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2498 IPR013324 RNA polymerase sigma factor, region 3/4 VF_2498 IPR014284 RNA polymerase sigma-70 like domain VF_2502 IPR011608 PRD domain VF_2502 IPR020044 PRD domain protein, EF0829/AHA3910 VF_2503 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 VF_2504 IPR020037 Protein of unknown function DUF4312 VF_2505 IPR020042 Protein of unknown function DUF4311 VF_2506 IPR025456 Protein of unknown function DUF4310 VF_2507 IPR006680 Amidohydrolase 1 VF_2507 IPR011059 Metal-dependent hydrolase, composite domain VF_2507 IPR020043 Amidohydrolase EF0837/AHA3915, putative VF_2507 IPR032466 VF_2507 VF_2508 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like VF_2508 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 VF_2508 IPR015424 Pyridoxal phosphate-dependent transferase VF_2508 IPR018319 L-seryl-tRNA selenium transferase-like VF_2509 IPR010763 Protein of unknown function DUF1341 VF_2510 IPR002178 PTS EIIA type-2 domain VF_2510 IPR003501 Phosphotransferase system, EIIB component, type 2/3 VF_2510 IPR007737 Mga helix-turn-helix domain VF_2510 IPR011608 PRD domain VF_2510 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2510 IPR013196 Helix-turn-helix, type 11 VF_2510 IPR016152 Phosphotransferase/anion transporter VF_2513 IPR000595 Cyclic nucleotide-binding domain VF_2513 IPR000644 CBS domain VF_2513 IPR005105 Protein-PII uridylyltransferase, N-terminal VF_2513 IPR014710 RmlC-like jelly roll fold VF_2513 IPR018490 Cyclic nucleotide-binding-like VF_2513 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VF_2514 IPR012337 Ribonuclease H-like domain VF_2514 IPR013520 Exonuclease, RNase T/DNA polymerase III VF_2515 IPR000060 BCCT transporter family VF_2515 IPR018093 BCCT transporter, conserved site VF_2516 IPR000515 MetI-like domain VF_2516 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VF_2517 IPR000515 MetI-like domain VF_2518 IPR000914 Bacterial extracellular solute-binding protein, family 5 VF_2518 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site VF_2518 IPR030678 VF_2518 VF_2519 IPR003439 ABC transporter-like VF_2519 IPR003593 AAA+ ATPase domain VF_2519 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal VF_2519 IPR017871 ABC transporter, conserved site VF_2519 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2520 IPR002323 Cytochrome c, class IE VF_2520 IPR009056 Cytochrome c-like domain VF_2521 IPR000212 DNA helicase, UvrD/REP type VF_2521 IPR005752 DNA helicase, ATP-dependent, RepA type VF_2521 IPR013986 DExx box DNA helicase domain VF_2521 IPR014016 UvrD-like Helicase, ATP-binding domain VF_2521 IPR014017 DNA helicase, UvrD-like, C-terminal VF_2521 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2522 IPR001647 DNA-binding HTH domain, TetR-type VF_2522 IPR009057 Homeodomain-like VF_2522 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal VF_2522 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VF_2522 IPR032551 VF_2522 VF_2523 IPR006143 RND efflux pump, membrane fusion protein VF_2523 IPR032317 VF_2523 VF_2524 IPR001036 Acriflavin resistance protein VF_2524 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VF_2525 IPR007475 Membrane fusogenic activity VF_2528 IPR000506 Acetohydroxy acid isomeroreductase C-terminal VF_2528 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like VF_2528 IPR013023 Acetohydroxy acid isomeroreductase VF_2528 IPR013116 Acetohydroxy acid isomeroreductase, catalytic VF_2528 IPR013328 Dehydrogenase, multihelical VF_2528 IPR016040 NAD(P)-binding domain VF_2529 IPR000847 Transcription regulator HTH, LysR VF_2529 IPR005119 LysR, substrate-binding VF_2529 IPR011991 Winged helix-turn-helix DNA-binding domain VF_2533 IPR001451 Bacterial transferase hexapeptide repeat VF_2533 IPR011004 Trimeric LpxA-like VF_2534 IPR009962 Protein of unknown function DUF1488 VF_2535 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VF_2535 IPR011342 Shikimate dehydrogenase VF_2535 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal VF_2535 IPR016040 NAD(P)-binding domain VF_2535 IPR022893 Shikimate, quinate/shikimate dehydrogenase VF_2536 IPR006070 YrdC-like domain VF_2536 IPR017945 DHBP synthase RibB-like alpha/beta domain VF_2536 IPR023535 Threonylcarbamoyl-AMP synthase VF_2537 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain VF_2537 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE VF_2538 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VF_2538 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit VF_2538 IPR011054 Rudiment single hybrid motif VF_2538 IPR013815 ATP-grasp fold, subdomain 1 VF_2538 IPR013816 ATP-grasp fold, subdomain 2 VF_2538 IPR016185 Pre-ATP-grasp domain VF_2539 IPR000380 DNA topoisomerase, type IA VF_2539 IPR013498 DNA topoisomerase, type IA, zn finger VF_2540 IPR007456 Protein of unknown function DUF494 VF_2541 IPR003488 DNA recombination-mediator protein A VF_2542 IPR018392 LysM domain VF_2543 IPR000181 Formylmethionine deformylase VF_2543 IPR023635 Peptide deformylase VF_2544 IPR001555 Phosphoribosylglycinamide formyltransferase, active site VF_2544 IPR002376 Formyl transferase, N-terminal VF_2544 IPR005793 Formyl transferase, C-terminal VF_2544 IPR005794 Methionyl-tRNA formyltransferase VF_2544 IPR011034 Formyl transferase, C-terminal-like VF_2545 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p VF_2545 IPR004573 rRNA small subunit methyltransferase B VF_2545 IPR006027 NusB/RsmB/TIM44 VF_2545 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site VF_2545 IPR023267 RNA (C5-cytosine) methyltransferase VF_2545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2546 IPR003148 Regulator of K+ conductance, N-terminal VF_2546 IPR006036 Potassium uptake protein TrkA VF_2546 IPR006037 Regulator of K+ conductance, C-terminal VF_2546 IPR016040 NAD(P)-binding domain VF_2547 IPR003445 Cation transporter VF_2547 IPR004772 Potassium uptake protein TrkH family VF_2548 IPR004254 Hly-III-related VF_2548 IPR005744 HylII VF_2549 IPR009776 Sporulation stage 0, protein M VF_2550 IPR009383 Protein of unknown function DUF1040 VF_2551 IPR013783 Immunoglobulin-like fold VF_2551 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG VF_2551 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VF_2551 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VF_2551 IPR032879 VF_2551 VF_2552 IPR002575 Aminoglycoside phosphotransferase VF_2552 IPR011009 Protein kinase-like domain VF_2552 IPR032882 VF_2552 VF_2553 IPR001853 DSBA-like thioredoxin domain VF_2553 IPR012336 Thioredoxin-like fold VF_2553 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VF_2554 IPR002123 Phospholipid/glycerol acyltransferase VF_2555 IPR000523 Magnesium chelatase, ChlI subunit VF_2555 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase VF_2555 IPR003593 AAA+ ATPase domain VF_2555 IPR004482 Mg chelatase-related protein VF_2555 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VF_2555 IPR020568 Ribosomal protein S5 domain 2-type fold VF_2555 IPR025158 Mg chelatase-related protein, C-terminal domain VF_2555 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VF_2555 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2556 IPR000399 TPP-binding enzyme, conserved site VF_2556 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding VF_2556 IPR012000 Thiamine pyrophosphate enzyme, central domain VF_2556 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain VF_2556 IPR012846 Acetolactate synthase, large subunit, biosynthetic VF_2556 IPR029035 DHS-like NAD/FAD-binding domain VF_2556 IPR029061 Thiamin diphosphate-binding fold VF_2558 IPR001544 Aminotransferase, class IV VF_2558 IPR005785 Branched-chain amino acid aminotransferase I VF_2558 IPR018300 Aminotransferase, class IV, conserved site VF_2559 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase VF_2559 IPR004404 Dihydroxy-acid dehydratase VF_2559 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel VF_2559 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site VF_2560 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site VF_2560 IPR001721 ACT-like domain VF_2560 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme VF_2560 IPR005787 Threonine dehydratase, biosynthetic VF_2561 IPR002059 Cold-shock protein, DNA-binding VF_2561 IPR011129 Cold shock protein VF_2561 IPR012156 Cold shock, CspA VF_2561 IPR012340 Nucleic acid-binding, OB-fold VF_2561 IPR019844 Cold-shock conserved site VF_2562 IPR001451 Bacterial transferase hexapeptide repeat VF_2562 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase VF_2562 IPR011004 Trimeric LpxA-like VF_2562 IPR018357 Hexapeptide transferase, conserved site VF_2562 IPR025877 MobA-like NTP transferase domain VF_2562 IPR029044 Nucleotide-diphospho-sugar transferases VF_2563 IPR001469 ATPase, F1 complex, delta/epsilon subunit VF_2563 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal VF_2563 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain VF_2564 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VF_2564 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal VF_2564 IPR003593 AAA+ ATPase domain VF_2564 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain VF_2564 IPR005722 ATPase, F1 complex, beta subunit VF_2564 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VF_2564 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal VF_2564 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2565 IPR000131 ATPase, F1 complex, gamma subunit VF_2565 IPR023632 ATPase, F1 complex, gamma subunit conserved site VF_2565 IPR023633 ATPase, F1 complex, gamma subunit domain VF_2566 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain VF_2566 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal VF_2566 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain VF_2566 IPR005294 ATPase, F1 complex, alpha subunit VF_2566 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site VF_2566 IPR023366 ATP synthase subunit alpha-like domain VF_2566 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2567 IPR000711 ATPase, OSCP/delta subunit VF_2567 IPR020781 ATPase, OSCP/delta subunit, conserved site VF_2567 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain VF_2568 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast VF_2568 IPR005864 ATPase, F0 complex, subunit B, bacterial VF_2568 IPR028987 F-type ATP synthase subunit B-like, membrane domain VF_2569 IPR000454 ATPase, F0 complex, subunit C VF_2569 IPR002379 V-ATPase proteolipid subunit C-like domain VF_2569 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast VF_2569 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site VF_2570 IPR000568 ATPase, F0 complex, subunit A VF_2570 IPR023011 ATPase, F0 complex, subunit A, active site VF_2571 IPR005598 ATP synthase protein I VF_2572 IPR003115 ParB/Sulfiredoxin VF_2572 IPR004437 ParB/RepB/Spo0J partition protein family VF_2573 IPR025669 AAA domain VF_2573 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_2574 IPR003682 rRNA small subunit methyltransferase G VF_2574 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2575 IPR002218 Glucose-inhibited division protein A-related VF_2575 IPR004416 Glucose-inhibited division protein A VF_2575 IPR020595 Glucose-inhibited division protein A-related, conserved site VF_2575 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain VF_2575 IPR026904 GidA associated domain 3 VF_2576 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 VF_2576 IPR010035 ThiS, thiamine-biosynthesis VF_2576 IPR012675 Beta-grasp domain VF_2576 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VF_2581 IPR007016 O-antigen ligase-related VF_2582 IPR007215 Sulphur relay, TusB/DsrH VF_2582 IPR027396 DsrEFH-like VF_2589 IPR003358 tRNA (guanine-N-7) methyltransferase VF_2589 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_2591 IPR008136 CinA, C-terminal VF_2592 IPR005899 Sodium ion-translocating decarboxylase VF_2592 IPR023424 Oxaloacetate decarboxylase gamma chain, probable VF_2602 IPR005801 ADC synthase VF_2602 IPR006805 Anthranilate synthase component I, N-terminal VF_2616 IPR006694 Fatty acid hydroxylase VF_2617 IPR011031 Multihaem cytochrome VF_2617 IPR025990 Cysteine-rich CPXCG protein VF_2618 IPR004893 Nitrogen fixation protein NifW VF_2629 IPR000612 Proteolipid membrane potential modulator VF_2630 IPR025346 Protein of unknown function DUF4250 VF_2637 IPR001455 TusA-like domain VF_2640 IPR024400 Protein of unknown function DUF2635 VF_2647 IPR010982 Lambda repressor-like, DNA-binding domain VF_2653 IPR000924 Glutamyl/glutaminyl-tRNA synthetase VF_2653 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VF_2653 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain VF_2653 IPR022380 Glutamyl-Q tRNA(Asp) synthetase VF_2656 IPR012340 Nucleic acid-binding, OB-fold VF_2659 IPR007435 Protein of unknown function DUF484 VF_2660 IPR032831 VF_2660 VF_A0010 IPR006171 Toprim domain VF_A0010 IPR013759 DNA topoisomerase, type IIA, central domain VF_A0010 IPR013760 DNA topoisomerase, type IIA-like domain VF_A0010 IPR018522 DNA topoisomerase, type IIA, conserved site VF_A0023 IPR002155 Thiolase VF_A0023 IPR016039 Thiolase-like VF_A0023 IPR020613 Thiolase, conserved site VF_A0023 IPR020616 Thiolase, N-terminal VF_A0023 IPR020617 Thiolase, C-terminal VF_A0025 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding VF_A0025 IPR016040 NAD(P)-binding domain VF_A0041 IPR013781 Glycoside hydrolase, catalytic domain VF_A0041 IPR015883 Glycoside hydrolase family 20, catalytic core VF_A0041 IPR017853 Glycoside hydrolase, superfamily VF_A0041 IPR025705 Beta-hexosaminidase VF_A0041 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like VF_A0041 IPR029019 Beta-hexosaminidase, eukaryotic type, N-terminal VF_A0058 IPR003695 Ppx/GppA phosphatase VF_A0076 IPR011701 Major facilitator superfamily VF_A0076 IPR020846 Major facilitator superfamily domain VF_A0094 IPR003660 HAMP linker domain VF_A0121 IPR029058 Alpha/Beta hydrolase fold VF_A0184 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain VF_A0184 IPR016040 NAD(P)-binding domain VF_A0194 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VF_A0194 IPR016040 NAD(P)-binding domain VF_A0221 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal VF_A0221 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain VF_A0221 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type VF_A0245 IPR000515 MetI-like domain VF_A0255 IPR006073 GTP binding domain VF_A0255 IPR006074 GTP1/OBG, conserved site VF_A0255 IPR006169 GTP1/OBG domain VF_A0255 IPR014100 GTP-binding protein Obg/CgtA VF_A0255 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0282 IPR001672 Phosphoglucose isomerase (PGI) VF_A0333 IPR004602 UvrABC system subunit A VF_A0333 IPR013815 ATP-grasp fold, subdomain 1 VF_A0333 IPR017871 ABC transporter, conserved site VF_A0333 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0362 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G VF_A0371 IPR000644 CBS domain VF_A0371 IPR006667 SLC41 divalent cation transporters, integral membrane domain VF_A0426 IPR008731 Phosphotransferase system, enzyme I N-terminal VF_A0443 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain VF_A0443 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain VF_A0443 IPR013815 ATP-grasp fold, subdomain 1 VF_A0443 IPR013816 ATP-grasp fold, subdomain 2 VF_A0443 IPR016185 Pre-ATP-grasp domain VF_A0474 IPR000845 Nucleoside phosphorylase domain VF_A0474 IPR018016 Nucleoside phosphorylase, conserved site VF_A0474 IPR018017 Nucleoside phosphorylase VF_A0480 IPR001482 Type II secretion system protein E VF_A0480 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0495 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin VF_A0495 IPR030191 VF_A0495 VF_A0497 IPR000873 AMP-dependent synthetase/ligase VF_A0504 IPR002318 Alanine-tRNA ligase, class IIc VF_A0504 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal VF_A0513 IPR011237 Peptidase M16 domain VF_A0513 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like VF_A0524 IPR004125 Signal recognition particle, SRP54 subunit, M-domain VF_A0524 IPR004780 Signal recognition particle protein Ffh VF_A0538 IPR001270 ClpA/B family VF_A0538 IPR003593 AAA+ ATPase domain VF_A0538 IPR003959 ATPase, AAA-type, core VF_A0538 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0538 IPR028299 ClpA/B, conserved site 2 VF_A0553 IPR000212 DNA helicase, UvrD/REP type VF_A0553 IPR014016 UvrD-like Helicase, ATP-binding domain VF_A0553 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0557 IPR006344 Exodeoxyribonuclease V, alpha subunit VF_A0557 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0557 IPR027785 UvrD-like helicase C-terminal domain VF_A0582 IPR001360 Glycoside hydrolase, family 1 VF_A0582 IPR013781 Glycoside hydrolase, catalytic domain VF_A0582 IPR017853 Glycoside hydrolase, superfamily VF_A0605 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type VF_A0611 IPR005225 Small GTP-binding protein domain VF_A0611 IPR006073 GTP binding domain VF_A0611 IPR015946 K homology domain-like, alpha/beta VF_A0611 IPR016484 GTP-binding protein EngA VF_A0611 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0611 IPR032859 VF_A0611 VF_A0624 IPR000801 Putative esterase VF_A0624 IPR014186 S-formylglutathione hydrolase VF_A0624 IPR029058 Alpha/Beta hydrolase fold VF_A0630 IPR002085 Alcohol dehydrogenase superfamily, zinc-type VF_A0630 IPR011032 GroES (chaperonin 10)-like VF_A0630 IPR013149 Alcohol dehydrogenase, C-terminal VF_A0630 IPR016040 NAD(P)-binding domain VF_A0653 IPR002220 DapA-like VF_A0653 IPR013785 Aldolase-type TIM barrel VF_A0657 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase VF_A0657 IPR011060 Ribulose-phosphate binding barrel VF_A0657 IPR013785 Aldolase-type TIM barrel VF_A0674 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain VF_A0730 IPR003714 PhoH-like protein VF_A0730 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0751 IPR003660 HAMP linker domain VF_A0751 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_A0751 IPR029151 Periplasmic sensor domain-like VF_A0751 IPR033479 VF_A0751 VF_A0755 IPR023214 HAD-like domain VF_A0758 IPR006121 Heavy metal-associated domain, HMA VF_A0763 IPR000515 MetI-like domain VF_A0771 IPR001404 Heat shock protein Hsp90 family VF_A0771 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_A0771 IPR020568 Ribosomal protein S5 domain 2-type fold VF_A0803 IPR001017 Dehydrogenase, E1 component VF_A0803 IPR011603 2-oxoglutarate dehydrogenase E1 component VF_A0803 IPR029061 Thiamin diphosphate-binding fold VF_A0838 IPR014030 Beta-ketoacyl synthase, N-terminal VF_A0838 IPR014031 Beta-ketoacyl synthase, C-terminal VF_A0838 IPR016039 Thiolase-like VF_A0838 IPR018201 Beta-ketoacyl synthase, active site VF_A0838 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VF_A0876 IPR010352 Protein of unknown function DUF945 VF_A0918 IPR010017 tRNA (mo5U34)-methyltransferase VF_A0918 IPR027555 tRNA (mo5U34)-methyltransferase-like VF_A0918 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like VF_A0955 IPR002085 Alcohol dehydrogenase superfamily, zinc-type VF_A0955 IPR011032 GroES (chaperonin 10)-like VF_A0955 IPR013149 Alcohol dehydrogenase, C-terminal VF_A0955 IPR016040 NAD(P)-binding domain VF_A0971 IPR010623 Domain of unknown function DUF1215 VF_A0982 IPR001270 ClpA/B family VF_A0982 IPR003593 AAA+ ATPase domain VF_A0982 IPR003959 ATPase, AAA-type, core VF_A0982 IPR019489 Clp ATPase, C-terminal VF_A0982 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0982 IPR028299 ClpA/B, conserved site 2 VF_A0983 IPR027417 P-loop containing nucleoside triphosphate hydrolase VF_A0986 IPR010272 Type VI secretion system, VCA0110 VF_A0995 IPR001692 Histidinol dehydrogenase, conserved site VF_A0995 IPR012131 Histidinol dehydrogenase VF_A0995 IPR016161 Aldehyde/histidinol dehydrogenase VF_A1015 IPR003594 Histidine kinase-like ATPase, C-terminal domain VF_A1015 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain VF_A1027 IPR000380 DNA topoisomerase, type IA VF_A1027 IPR003602 DNA topoisomerase, type IA, DNA-binding domain VF_A1027 IPR013497 DNA topoisomerase, type IA, central VF_A1027 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VF_A1027 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VF_A1027 IPR023405 DNA topoisomerase, type IA, core domain VF_A1027 IPR023406 DNA topoisomerase, type IA, active site VF_A1032 IPR005841 Alpha-D-phosphohexomutase superfamily VF_A1032 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I VF_A1032 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II VF_A1032 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III VF_A1032 IPR016066 Alpha-D-phosphohexomutase, conserved site VF_A1035 IPR000726 Glycoside hydrolase, family 19, catalytic VF_A1035 IPR003610 Carbohydrate-binding module family 5/12 VF_A1035 IPR023346 Lysozyme-like domain VF_A1063 IPR004668 Anaerobic c4-dicarboxylate membrane transporter VF_A1069 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain VF_A1069 IPR013587 Nitrate/nitrite sensing protein VF_A1070 IPR013587 Nitrate/nitrite sensing protein VF_A1101 IPR000109 Proton-dependent oligopeptide transporter family VF_A1101 IPR020846 Major facilitator superfamily domain VF_A1141 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain VF_A1141 IPR010275 Protein of unknown function DUF882 VF_A1180 IPR001986 Enolpyruvate transferase domain VF_A1180 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta VF_A1185 IPR000600 ROK VF_A1187 IPR001991 Sodium:dicarboxylate symporter VF_A1190 IPR011991 Winged helix-turn-helix DNA-binding domain VF_B0004 IPR001708 Membrane insertase OXA1/ALB3/YidC VF_B0004 IPR028053 Membrane insertase YidC, N-terminal VF_B0020 IPR001241 DNA topoisomerase, type IIA VF_B0020 IPR006171 Toprim domain VF_B0020 IPR013759 DNA topoisomerase, type IIA, central domain VF_B0020 IPR013760 DNA topoisomerase, type IIA-like domain VF_B0028 IPR015944 Glycine-tRNA ligase, beta subunit VF_B0052 IPR010722 Biotin and thiamin synthesis-associated domain VF_B0052 IPR013785 Aldolase-type TIM barrel